HHsearch alignment for GI: 254781027 and conserved domain: COG0466

>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=97.37  E-value=0.00032  Score=41.89  Aligned_cols=63  Identities=24%  Similarity=0.292  Sum_probs=52.2

Q ss_pred             CCEEEEEEECCCCC-HHH------HHHHHHCC-CEEEEEHHHHHHHHHH----CCCCEEEECCCHHHHHHHHCCC
Q ss_conf             56689985035775-379------99872039-8699836550455631----2881075107499999997098
Q gi|254781027|r   13 SHYLAVGEINLDGS-LPA------AICAKNMN-KDFICPQSCGSEAAWA----SDSLRIVAPSTLLELINHLNNK   75 (108)
Q Consensus        13 ~~~~~iGELsLdG~-Lp~------al~a~~~~-~~~iiP~~N~~Ea~lv----~~~~~v~~~~~L~evv~~l~g~   75 (108)
T Consensus       701 ~~vAMTGEITLrG~VLpIGGLKEKllAA~R~GIk~viiP~~N~~DleeiP~~vk~~l~i~~V~~~deVlk~al~~  775 (782)
T COG0466         701 ADVAMTGEITLRGRVLPIGGLKEKLLAAHRGGIKTVIIPKDNERDLEEIPDNVKEGLEIHPVKTIDEVLKLALVG  775 (782)
T ss_pred             CCCCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCHHHCCHHHHCCCEEEEECCHHHHHHHHHCC
T ss_conf             885412457863024622559899999986598589646545014876779887497499925099999997168