HHsearch alignment for GI: 254781027 and conserved domain: PRK10787

>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=97.64  E-value=9.4e-05  Score=44.60  Aligned_cols=65  Identities=20%  Similarity=0.239  Sum_probs=53.0

Q ss_pred             HCCEEEEEEECCCCC-HHH------HHHHHHCC-CEEEEEHHHHHHHHH----HCCCCEEEECCCHHHHHHHHCCCC
Q ss_conf             356689985035775-379------99872039-869983655045563----128810751074999999970986
Q gi|254781027|r   12 FSHYLAVGEINLDGS-LPA------AICAKNMN-KDFICPQSCGSEAAW----ASDSLRIVAPSTLLELINHLNNKQ   76 (108)
Q Consensus        12 l~~~~~iGELsLdG~-Lp~------al~a~~~~-~~~iiP~~N~~Ea~l----v~~~~~v~~~~~L~evv~~l~g~~   76 (108)
T Consensus       698 ~~~~amTGEitL~G~VlpiGG~keK~laA~r~gi~~vi~P~~N~~d~~~ip~~v~~~l~~~~v~~~~ev~~~al~~~  774 (784)
T PRK10787        698 RADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNE  774 (784)
T ss_pred             CCCCCEEEEEEECEEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHCCHHHHCCCEEEEECCHHHHHHHHHHCC
T ss_conf             99965556566020278207899999999984998999452123559874999886989999394999999997569