HHsearch alignment of GI: 254781027 and MMDB domain: 1z0w_A_
>1z0w_A (A:) Putative protease LA homolog type; ATP-dependent protease, catalytic Ser-Lys DYAD, B-type LON, hydrolase; 1.20A {Archaeoglobus fulgidus} PDB: 1z0b_A 1z0c_A 1z0e_A 1z0g_A 1z0t_A 1z0v_A
Probab=99.29 E-value=1.9e-12 Score=83.24 Aligned_cols=82 Identities=13% Similarity=0.212 Sum_probs=68.2
Q ss_pred HCCEEEEEEECCCCCH-------HHHHHHHHCC-CEEEEEHHHHHHHHHH---CCCCEEEECCCHHHHHHHHCCCCCCCC
Q ss_conf 3566899850357753-------7999872039-8699836550455631---288107510749999999709864676
Q gi|254781027|r 12 FSHYLAVGEINLDGSL-------PAAICAKNMN-KDFICPQSCGSEAAWA---SDSLRIVAPSTLLELINHLNNKQLLPQ 80 (108)
Q Consensus 12 l~~~~~iGELsLdG~L-------p~al~a~~~~-~~~iiP~~N~~Ea~lv---~~~~~v~~~~~L~evv~~l~g~~~~~~ 80 (108)
-.++.|.|||+|||++ +.+.+|++.| +.+|||.+|..|+.+. .+++++++++||.|+++++.+....++
T Consensus 114 ~~~~~~tGel~l~G~V~~V~gi~~ki~aA~~~G~k~vivP~~n~~~~~l~~~~~~gi~i~~v~~l~ea~~~~~~~~~~~~ 193 (207)
T 1z0w_A 114 DQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKKVIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVLEDGKKKN 193 (207)
T ss_dssp ETTEEECCEECTTSBEECCSCHHHHHHHHHHTTCSEEEEEGGGGGGCCCCTTTTTSSEEEEESBHHHHHHHHBCCSHHHH
T ss_pred CHHEEEHHHHCCCHHHCCHHHHHHHHHHHHHCCCCEEECCCCCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCH
T ss_conf 00111012316513322001088999999976983797166665533546011698499996959999999812675311
Q ss_pred CCCCCCCCCCCCCCHHHHCCHH
Q ss_conf 7754446765699876715846
Q gi|254781027|r 81 PCKSTYKKRDNLPNFAEIKGQK 102 (108)
Q Consensus 81 ~~~~~~~~~~~~~Df~dV~GQ~ 102 (108)
. ...||.||+||.
T Consensus 194 ~---------~~~~~~~~~~q~ 206 (207)
T 1z0w_A 194 R---------LMSKFKELELAA 206 (207)
T ss_dssp H---------HHHHHHHHHHHH
T ss_pred H---------HHHHHHHCCCCC
T ss_conf 5---------677665233246