HHsearch alignment of GI: 254781027 and MMDB domain: 1z0w_A_

>1z0w_A (A:) Putative protease LA homolog type; ATP-dependent protease, catalytic Ser-Lys DYAD, B-type LON, hydrolase; 1.20A {Archaeoglobus fulgidus} PDB: 1z0b_A 1z0c_A 1z0e_A 1z0g_A 1z0t_A 1z0v_A
Probab=99.29  E-value=1.9e-12  Score=83.24  Aligned_cols=82  Identities=13%  Similarity=0.212  Sum_probs=68.2

Q ss_pred             HCCEEEEEEECCCCCH-------HHHHHHHHCC-CEEEEEHHHHHHHHHH---CCCCEEEECCCHHHHHHHHCCCCCCCC
Q ss_conf             3566899850357753-------7999872039-8699836550455631---288107510749999999709864676
Q gi|254781027|r   12 FSHYLAVGEINLDGSL-------PAAICAKNMN-KDFICPQSCGSEAAWA---SDSLRIVAPSTLLELINHLNNKQLLPQ   80 (108)
Q Consensus        12 l~~~~~iGELsLdG~L-------p~al~a~~~~-~~~iiP~~N~~Ea~lv---~~~~~v~~~~~L~evv~~l~g~~~~~~   80 (108)
                      -.++.|.|||+|||++       +.+.+|++.| +.+|||.+|..|+.+.   .+++++++++||.|+++++.+....++
T Consensus       114 ~~~~~~tGel~l~G~V~~V~gi~~ki~aA~~~G~k~vivP~~n~~~~~l~~~~~~gi~i~~v~~l~ea~~~~~~~~~~~~  193 (207)
T 1z0w_A          114 DQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKKVIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVLEDGKKKN  193 (207)
T ss_dssp             ETTEEECCEECTTSBEECCSCHHHHHHHHHHTTCSEEEEEGGGGGGCCCCTTTTTSSEEEEESBHHHHHHHHBCCSHHHH
T ss_pred             CHHEEEHHHHCCCHHHCCHHHHHHHHHHHHHCCCCEEECCCCCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCH
T ss_conf             00111012316513322001088999999976983797166665533546011698499996959999999812675311


Q ss_pred             CCCCCCCCCCCCCCHHHHCCHH
Q ss_conf             7754446765699876715846
Q gi|254781027|r   81 PCKSTYKKRDNLPNFAEIKGQK  102 (108)
Q Consensus        81 ~~~~~~~~~~~~~Df~dV~GQ~  102 (108)
                      .         ...||.||+||.
T Consensus       194 ~---------~~~~~~~~~~q~  206 (207)
T 1z0w_A          194 R---------LMSKFKELELAA  206 (207)
T ss_dssp             H---------HHHHHHHHHHHH
T ss_pred             H---------HHHHHHHCCCCC
T ss_conf             5---------677665233246