HHSEARCH alignment of GI: 254781027 and SCOP domain: d1xhka_

Alignment

Probab=99.24  E-value=7e-12  Score=78.38  Aligned_cols=68  Identities=19%  Similarity=0.305  Sum_probs=57.7

Q ss_pred             CCCCCHHHHCCEEEEEEECCCCCH-------HHHHHHHHCC-CEEEEEHHHHHHHHHHCCCCEEEECCCHHHHHHHHCC
Q ss_conf             458885773566899850357753-------7999872039-8699836550455631288107510749999999709
Q gi|254781027|r    4 IQAISTESFSHYLAVGEINLDGSL-------PAAICAKNMN-KDFICPQSCGSEAAWASDSLRIVAPSTLLELINHLNN   74 (108)
Q Consensus         4 sgqi~~~~l~~~~~iGELsLdG~L-------p~al~a~~~~-~~~iiP~~N~~Ea~lv~~~~~v~~~~~L~evv~~l~g   74 (108)
                      ...+|.  -+++.|+|||+|||++       +.+.+|++.| +++|+|.+|..|+..+ ++++|++++||.|+++++.+
T Consensus       108 ~~~~~i--~~~~~~~GEl~L~G~VrpV~gi~~ki~~A~~~G~~~viiP~~n~~e~~~~-~~i~i~~v~~l~eai~~l~~  183 (185)
T d1xhka_         108 LLDIPL--KQDFAITGSLDLSGNVLAIGGVNEKIEAAKRYGFKRVIIPEANMIDVIET-EGIEIIPVKTLDEIVPLVFD  183 (185)
T ss_dssp             HHTCCB--CSSEEECCEECTTCBEECCSCHHHHHHHHHHTTCSEEEEEGGGGGGCCCC-CSSEEEEESBHHHHHHHHBC
T ss_pred             HHCCCC--CCEEEEEECCCCCHHHHHCCCHHHHHHHHHHCCCCEEEECHHHHHHCCCC-CCCEEEEECCHHHHHHHHHC
T ss_conf             708986--32078871245533455215789999999983998999877776540656-99699991839999999866

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: ATP-dependent protease Lon (La), catalytic domain
domain: ATP-dependent protease Lon (La), catalytic domain
species: Methanococcus jannaschii [TaxId: 2190]