BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254781029|ref|YP_003065442.1| chemotaxis sensory transducer [Candidatus Liberibacter asiaticus str. psy62] (1828 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254781029|ref|YP_003065442.1| chemotaxis sensory transducer [Candidatus Liberibacter asiaticus str. psy62] Length = 1828 Score = 3667 bits (9508), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1828/1828 (100%), Positives = 1828/1828 (100%) Query: 1 MSNKKENKATYRDSLKEFEEQSTSDSHENKKRHHSRKKHKYSRRDDSIESKDRQQTTLSK 60 MSNKKENKATYRDSLKEFEEQSTSDSHENKKRHHSRKKHKYSRRDDSIESKDRQQTTLSK Sbjct: 1 MSNKKENKATYRDSLKEFEEQSTSDSHENKKRHHSRKKHKYSRRDDSIESKDRQQTTLSK 60 Query: 61 NFKQASNKQTYSGFYPANDLDNGGITHILQNIGKNSLNIALRNAFMSSLIWLACELGFLI 120 NFKQASNKQTYSGFYPANDLDNGGITHILQNIGKNSLNIALRNAFMSSLIWLACELGFLI Sbjct: 61 NFKQASNKQTYSGFYPANDLDNGGITHILQNIGKNSLNIALRNAFMSSLIWLACELGFLI 120 Query: 121 KFYTNSPMDSFYDFAMRPEVITLFLVVSVVPILLFFSFFIMISRARDMHDASQSIAGIAL 180 KFYTNSPMDSFYDFAMRPEVITLFLVVSVVPILLFFSFFIMISRARDMHDASQSIAGIAL Sbjct: 121 KFYTNSPMDSFYDFAMRPEVITLFLVVSVVPILLFFSFFIMISRARDMHDASQSIAGIAL 180 Query: 181 RLIDPEEYSSEKMQSISSAVRKEIVLMTEEIDRAISRASELEKTVRSEIEVLENNYTKSE 240 RLIDPEEYSSEKMQSISSAVRKEIVLMTEEIDRAISRASELEKTVRSEIEVLENNYTKSE Sbjct: 181 RLIDPEEYSSEKMQSISSAVRKEIVLMTEEIDRAISRASELEKTVRSEIEVLENNYTKSE 240 Query: 241 MRIDNITQNLKQEREAIINHGTQLCTSIAEVHESLKEELSLTSEEISVHLSRAIDSFQSI 300 MRIDNITQNLKQEREAIINHGTQLCTSIAEVHESLKEELSLTSEEISVHLSRAIDSFQSI Sbjct: 241 MRIDNITQNLKQEREAIINHGTQLCTSIAEVHESLKEELSLTSEEISVHLSRAIDSFQSI 300 Query: 301 VDVRIAKVTEKTTRIVQESAQTISSKIDQLLEVLHSTSIVITKDFDNRIESLSNTLNNSG 360 VDVRIAKVTEKTTRIVQESAQTISSKIDQLLEVLHSTSIVITKDFDNRIESLSNTLNNSG Sbjct: 301 VDVRIAKVTEKTTRIVQESAQTISSKIDQLLEVLHSTSIVITKDFDNRIESLSNTLNNSG 360 Query: 361 RSLANQVGNYTLMLGNNTDKVSIALKEQSQQFMQAFTSHICEMSNFFSEKQKSITVTLND 420 RSLANQVGNYTLMLGNNTDKVSIALKEQSQQFMQAFTSHICEMSNFFSEKQKSITVTLND Sbjct: 361 RSLANQVGNYTLMLGNNTDKVSIALKEQSQQFMQAFTSHICEMSNFFSEKQKSITVTLND 420 Query: 421 VLQSLRISLQEKEDSFCSNLKSTTDNTLREVDNRTNTLENRITAFLKEIVETFNNSITDF 480 VLQSLRISLQEKEDSFCSNLKSTTDNTLREVDNRTNTLENRITAFLKEIVETFNNSITDF Sbjct: 421 VLQSLRISLQEKEDSFCSNLKSTTDNTLREVDNRTNTLENRITAFLKEIVETFNNSITDF 480 Query: 481 SSFYKDNLSEFESNLQGNIDKLQGCFADSHGNMEDLFLSNIQTIGSNLDKKTLLFEDILS 540 SSFYKDNLSEFESNLQGNIDKLQGCFADSHGNMEDLFLSNIQTIGSNLDKKTLLFEDILS Sbjct: 481 SSFYKDNLSEFESNLQGNIDKLQGCFADSHGNMEDLFLSNIQTIGSNLDKKTLLFEDILS 540 Query: 541 KKQNNISQITSMNTERLENTLTNSINSLKDMLEEKRQRIDSDIGKKSEELCSSFNSSYQK 600 KKQNNISQITSMNTERLENTLTNSINSLKDMLEEKRQRIDSDIGKKSEELCSSFNSSYQK Sbjct: 541 KKQNNISQITSMNTERLENTLTNSINSLKDMLEEKRQRIDSDIGKKSEELCSSFNSSYQK 600 Query: 601 VSNVISDREKLFSNSLARVQSHFEETIAGHPQSIVDSISNSTNNLYDKIMVLAAALSESQ 660 VSNVISDREKLFSNSLARVQSHFEETIAGHPQSIVDSISNSTNNLYDKIMVLAAALSESQ Sbjct: 601 VSNVISDREKLFSNSLARVQSHFEETIAGHPQSIVDSISNSTNNLYDKIMVLAAALSESQ 660 Query: 661 KSLDNSLKAHATDVVHKITNAENQLVNRFDESSKNIICSYNSSNNKLETIFQKHLHSFND 720 KSLDNSLKAHATDVVHKITNAENQLVNRFDESSKNIICSYNSSNNKLETIFQKHLHSFND Sbjct: 661 KSLDNSLKAHATDVVHKITNAENQLVNRFDESSKNIICSYNSSNNKLETIFQKHLHSFND 720 Query: 721 TFNNKSDHVSGILKNSTQHIDDLFSNNAKRMEELLHSGSANIESELSAISKAMNKSIDDV 780 TFNNKSDHVSGILKNSTQHIDDLFSNNAKRMEELLHSGSANIESELSAISKAMNKSIDDV Sbjct: 721 TFNNKSDHVSGILKNSTQHIDDLFSNNAKRMEELLHSGSANIESELSAISKAMNKSIDDV 780 Query: 781 ETISTALKERCQELGSDLVNHSDKVLSSLKQAQELLCTTFAQRNDSFVNALADNQSKFEN 840 ETISTALKERCQELGSDLVNHSDKVLSSLKQAQELLCTTFAQRNDSFVNALADNQSKFEN Sbjct: 781 ETISTALKERCQELGSDLVNHSDKVLSSLKQAQELLCTTFAQRNDSFVNALADNQSKFEN 840 Query: 841 NLVNQSHLLLDKLSSDIQKLTDIAYSKAIDVANSLTEIQGNVGVTLENHSQAMLEKISAS 900 NLVNQSHLLLDKLSSDIQKLTDIAYSKAIDVANSLTEIQGNVGVTLENHSQAMLEKISAS Sbjct: 841 NLVNQSHLLLDKLSSDIQKLTDIAYSKAIDVANSLTEIQGNVGVTLENHSQAMLEKISAS 900 Query: 901 NTLVAKTFEECMSNILLSYDENRQTLDKKLSDHIDVLRQNLAGSENKIDGAIGSASQFIR 960 NTLVAKTFEECMSNILLSYDENRQTLDKKLSDHIDVLRQNLAGSENKIDGAIGSASQFIR Sbjct: 901 NTLVAKTFEECMSNILLSYDENRQTLDKKLSDHIDVLRQNLAGSENKIDGAIGSASQFIR 960 Query: 961 DILDENSSRIESLLSCSNNSVNSTLLRSHQKFDRLLQEKSDELIQLLDNKASCLSTAVST 1020 DILDENSSRIESLLSCSNNSVNSTLLRSHQKFDRLLQEKSDELIQLLDNKASCLSTAVST Sbjct: 961 DILDENSSRIESLLSCSNNSVNSTLLRSHQKFDRLLQEKSDELIQLLDNKASCLSTAVST 1020 Query: 1021 QTINLENNLKEQEKSLSRVVDTSASSFKYLSDSIQTLAQELVSVIGSMSQSTTDISGKLE 1080 QTINLENNLKEQEKSLSRVVDTSASSFKYLSDSIQTLAQELVSVIGSMSQSTTDISGKLE Sbjct: 1021 QTINLENNLKEQEKSLSRVVDTSASSFKYLSDSIQTLAQELVSVIGSMSQSTTDISGKLE 1080 Query: 1081 ISLDSVNQKIQKCREFFGDNIVAFMDEISKVMEISEKRISQRTQEISQQLLQNNDVITNQ 1140 ISLDSVNQKIQKCREFFGDNIVAFMDEISKVMEISEKRISQRTQEISQQLLQNNDVITNQ Sbjct: 1081 ISLDSVNQKIQKCREFFGDNIVAFMDEISKVMEISEKRISQRTQEISQQLLQNNDVITNQ 1140 Query: 1141 IIDSTSRVRGEIVDISNKFIETSRVLEQREEKFHSALDSFSDNISRILLDVDHTISSHTN 1200 IIDSTSRVRGEIVDISNKFIETSRVLEQREEKFHSALDSFSDNISRILLDVDHTISSHTN Sbjct: 1141 IIDSTSRVRGEIVDISNKFIETSRVLEQREEKFHSALDSFSDNISRILLDVDHTISSHTN 1200 Query: 1201 ESRSLIEQRIHEVKDVLSNLDRALESYGSTVFKQFKEYVQCFETNMENMESLFDKNNDSM 1260 ESRSLIEQRIHEVKDVLSNLDRALESYGSTVFKQFKEYVQCFETNMENMESLFDKNNDSM Sbjct: 1201 ESRSLIEQRIHEVKDVLSNLDRALESYGSTVFKQFKEYVQCFETNMENMESLFDKNNDSM 1260 Query: 1261 LLSFKERSNILDNILSQRSMEISDSISGAFHKEGNAVVNVIDQQIYNAANALKKLEALLI 1320 LLSFKERSNILDNILSQRSMEISDSISGAFHKEGNAVVNVIDQQIYNAANALKKLEALLI Sbjct: 1261 LLSFKERSNILDNILSQRSMEISDSISGAFHKEGNAVVNVIDQQIYNAANALKKLEALLI 1320 Query: 1321 SDVEKITNRITDSSQDVTTIISDATDSLNKVDERLHQTTNRITETTGHIDTVLAESSKLF 1380 SDVEKITNRITDSSQDVTTIISDATDSLNKVDERLHQTTNRITETTGHIDTVLAESSKLF Sbjct: 1321 SDVEKITNRITDSSQDVTTIISDATDSLNKVDERLHQTTNRITETTGHIDTVLAESSKLF 1380 Query: 1381 EKKIKDLGEISRVSLLQMSEIVSKFDKNSQILIKSHDSLMKAQSETKLSLDKDANNLVDL 1440 EKKIKDLGEISRVSLLQMSEIVSKFDKNSQILIKSHDSLMKAQSETKLSLDKDANNLVDL Sbjct: 1381 EKKIKDLGEISRVSLLQMSEIVSKFDKNSQILIKSHDSLMKAQSETKLSLDKDANNLVDL 1440 Query: 1441 TSRLVSKSSEAQKFVMSILVDVKKIVEQADFLSDTVVKNMTDSIQSSFIKIDGTLSNIET 1500 TSRLVSKSSEAQKFVMSILVDVKKIVEQADFLSDTVVKNMTDSIQSSFIKIDGTLSNIET Sbjct: 1441 TSRLVSKSSEAQKFVMSILVDVKKIVEQADFLSDTVVKNMTDSIQSSFIKIDGTLSNIET 1500 Query: 1501 RSRDTVRLIDHNLADIGNKTVKTIDSNFVTLKEKSYDLSNHMRQKICSTIPNIENIFSTL 1560 RSRDTVRLIDHNLADIGNKTVKTIDSNFVTLKEKSYDLSNHMRQKICSTIPNIENIFSTL Sbjct: 1501 RSRDTVRLIDHNLADIGNKTVKTIDSNFVTLKEKSYDLSNHMRQKICSTIPNIENIFSTL 1560 Query: 1561 EEKSDQSMQVFLDSLNNKVDSFTQKLSKTSDDIALTSRRIAEDLNNSRDILKRDSVSLAK 1620 EEKSDQSMQVFLDSLNNKVDSFTQKLSKTSDDIALTSRRIAEDLNNSRDILKRDSVSLAK Sbjct: 1561 EEKSDQSMQVFLDSLNNKVDSFTQKLSKTSDDIALTSRRIAEDLNNSRDILKRDSVSLAK 1620 Query: 1621 EAKESADTIRSAIEEQINTLKDFQKLITDSVKNNAASYNKGLHSDEYNISQVDKRPSGKK 1680 EAKESADTIRSAIEEQINTLKDFQKLITDSVKNNAASYNKGLHSDEYNISQVDKRPSGKK Sbjct: 1621 EAKESADTIRSAIEEQINTLKDFQKLITDSVKNNAASYNKGLHSDEYNISQVDKRPSGKK 1680 Query: 1681 TKNNHAIKEWFNKILSSSTHSKGKSSSHIDISDKDSLSSIDSLVENISKFIDYDAFVQLW 1740 TKNNHAIKEWFNKILSSSTHSKGKSSSHIDISDKDSLSSIDSLVENISKFIDYDAFVQLW Sbjct: 1681 TKNNHAIKEWFNKILSSSTHSKGKSSSHIDISDKDSLSSIDSLVENISKFIDYDAFVQLW 1740 Query: 1741 KSYTLGEDDIFSKRLYTIKGQKVFLNLQEQYKADSALRNAIDRYISNFEEMLSEIAQSND 1800 KSYTLGEDDIFSKRLYTIKGQKVFLNLQEQYKADSALRNAIDRYISNFEEMLSEIAQSND Sbjct: 1741 KSYTLGEDDIFSKRLYTIKGQKVFLNLQEQYKADSALRNAIDRYISNFEEMLSEIAQSND 1800 Query: 1801 DSPLVQEHIMSNYGKVYTMLVHASGRTL 1828 DSPLVQEHIMSNYGKVYTMLVHASGRTL Sbjct: 1801 DSPLVQEHIMSNYGKVYTMLVHASGRTL 1828 >gi|254780140|ref|YP_003064553.1| putative ABC transporter, substrate-binding protein [Candidatus Liberibacter asiaticus str. psy62] Length = 452 Score = 32.3 bits (72), Expect = 0.080, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 27/244 (11%) Query: 1340 IISDATDSLNKVDERLHQTTNRITETTGHIDTVLAESSKLFEKKIKDLGEISRVSLLQMS 1399 +I+ +N T+ +I++++ HI ++ K I ++ IS V +S Sbjct: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195 Query: 1400 EIVSKFDKNSQILIKSHDSLMKAQSETKL--SLDKDANNLVDLTSRLVSKSSEAQKFVMS 1457 I K +Q+ S DS + T L SLDK +DL + + + + Sbjct: 196 HI-DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK-AIDL--------QKVNQILEN 245 Query: 1458 ILVDVKKIVEQADFLSDTV--VKNMTDSIQSSFIKIDGTLSNIETR--SRDTVRLIDHNL 1513 I V V+ +D + +TV V+ T + Q KID LS+ ++ S++T ++ N+ Sbjct: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE-NI 304 Query: 1514 ADIGNKTVKTIDSNFVTLKEKSYDLSNHMRQKICSTIPNIENIFSTLEEKSDQSMQVFLD 1573 AD + + S+ ++E + RQKI STI IENI S L + S Q + Sbjct: 305 AD----STSNMRSSISAIREIT-----DQRQKIISTINTIENITSNLND-SSQKFAELMS 354 Query: 1574 SLNN 1577 +NN Sbjct: 355 KINN 358 Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust. Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 8/65 (12%) Query: 742 DLFSNNAKRMEELLHSGSANIESELSAISKAMNKSIDDVETISTALKERCQELGSDLVNH 801 + F +NA+ + + S +I+ + I K + +I ++ETIST L ++ ++H Sbjct: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL--------ANNISH 196 Query: 802 SDKVL 806 DK++ Sbjct: 197 IDKMM 201 Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 75/148 (50%), Gaps = 19/148 (12%) Query: 417 TLNDVLQSL-----RISLQEKEDSFCSNLKSTTDNTLREVDNRTNTLEN--RITAFLKEI 469 T+ D++ SL I LQ K + N++ +++N ++ D NT+ + T +E+ Sbjct: 219 TITDLITSLDKMIKAIDLQ-KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277 Query: 470 VETFNNSITDFSSFYK--------DNLSEFESNLQGNIDKLQGCFADSHGNMEDLFLSNI 521 + ++ ++DFSS K +N+++ SN++ +I ++ + + + I Sbjct: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI--NTI 335 Query: 522 QTIGSNLDKKTLLFEDILSKKQNNISQI 549 + I SNL+ + F +++SK NNIS + Sbjct: 336 ENITSNLNDSSQKFAELMSKI-NNISAL 362 >gi|254780463|ref|YP_003064876.1| putative peptidoglycan binding protein [Candidatus Liberibacter asiaticus str. psy62] Length = 673 Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 37/225 (16%) Query: 1055 QTLAQELVSVIGSMSQSTTDISG-KLEISLDSVNQKIQK---CREFFGDNIVAFMDEISK 1110 + L+QE I + S I+G E+S ++N IQ+ C N+V D+ + Sbjct: 47 KPLSQEQKEKIKILWSSLRKIAGSNEEVSDPNLNSPIQREDDC------NVVRTNDDTKQ 100 Query: 1111 VMEISEKRISQR--TQEISQQLLQNNDVITNQIIDSTSRVRGEIVDISNKFIETSRVLEQ 1168 + + K++S Q I + QN + N +S + G + Sbjct: 101 IFNLLRKKLSNPHLQQHIESKTEQNGGIDPNLQSESLPTIPGTAI--------------- 145 Query: 1169 REEK----FHSALDSFSDNISRI--LLDVDHTISSHTNESRSL--IEQRIHE--VKDVLS 1218 RE+ FHS + S +I+ + ++ + SH+ + L +E E ++ V + Sbjct: 146 REDDDIDIFHSDMAKLSKSITELCRIISIPGIKKSHSQLEKILSKMENIAKECSLQSVEN 205 Query: 1219 NLDRALESYGSTVFKQFKEYVQCFETNMENMESLFDKNNDSMLLS 1263 N AL+ + FK E + M M+ FDKNN+ S Sbjct: 206 NWKGALQHFKKLDFKNLHEKINTLSCQMNVMQCTFDKNNNGFAAS 250 >gi|254781130|ref|YP_003065543.1| hypothetical protein CLIBASIA_05160 [Candidatus Liberibacter asiaticus str. psy62] Length = 378 Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Query: 191 EKMQSISSAVRKEIVLMTEEIDRAISRASELEKTVRSEIEVLENNYTK-SEMRIDNITQN 249 +K+ SSA +EI+ + ID S ++ +R I ENN + +E+ +D I Sbjct: 265 KKVHGESSASAREIIEQLKFIDFNYLPESGMDSELRYLIGFSENNLKEINEVFVDTIGGY 324 Query: 250 LKQEREAIINHGTQLCTSIAEVHESLKE 277 L II H L +I E+ + +KE Sbjct: 325 LAPNPSVIIPH---LAKAIQELLQEVKE 349 >gi|255764487|ref|YP_003065115.2| heat shock protein [Candidatus Liberibacter asiaticus str. psy62] Length = 219 Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 5/89 (5%) Query: 1172 KFHSALDSFSDNISRILLDVDHTISSHTNESRSLIEQRIHEVKDVLSNLDRALESYGSTV 1231 KF + S SDN+SR L +++ +S S+++ I ++ + LE YG Sbjct: 75 KFARDMLSVSDNLSRALDSAPLDLANSEKKSESVLKSLIEGIEMTRREMMSTLERYG--- 131 Query: 1232 FKQFKEYVQCFETNMENMESLFDKNNDSM 1260 K+ Q F NM +++F++ +D++ Sbjct: 132 VKKIDAKDQKFNPNMH--QAMFEEPHDTV 158 >gi|254780373|ref|YP_003064786.1| flagellar basal body-associated protein FliL [Candidatus Liberibacter asiaticus str. psy62] Length = 172 Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 10/55 (18%) Query: 1168 QREEKFHS-ALDSFSDNISRILLDVDHTISSHTNESRSLIEQRIHEVKDVLSNLD 1221 Q+EEK+ L++F DN R S HT ++ SL + +I ++ +++N D Sbjct: 48 QKEEKYQKFILNNFYDNSVR---------SVHTGDTISLKKLQIFSLQPIITNFD 93 >gi|254780999|ref|YP_003065412.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 562 Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust. Identities = 12/27 (44%), Positives = 17/27 (62%) Query: 868 AIDVANSLTEIQGNVGVTLENHSQAML 894 I N + I+GN+ + L NHS+AML Sbjct: 376 GIVAENIQSRIRGNILMALSNHSKAML 402 >gi|254780350|ref|YP_003064763.1| hypothetical protein CLIBASIA_01175 [Candidatus Liberibacter asiaticus str. psy62] Length = 431 Score = 26.2 bits (56), Expect = 5.1, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 1153 VDISNKFIETSRVLEQREEKFHSAL-DSFSDNISRILLDVDHTISSHTNESRSLIEQRIH 1211 + + K I S + E E +HS + D F + ++R+ + +D I + E+ + E+ I Sbjct: 24 LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA 83 Query: 1212 EVKDVLS 1218 +D+LS Sbjct: 84 FYQDILS 90 >gi|254780799|ref|YP_003065212.1| DNA translocase FtsK [Candidatus Liberibacter asiaticus str. psy62] Length = 806 Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Query: 1110 KVMEISEKRISQRTQEISQQLLQNNDVITNQIIDSTSRVRGEIVDISNKFIETSRVLEQR 1169 +++ S+ ++Q T S +++QNN ++ S ++GEIV++ + T LE Sbjct: 313 EILSTSQSPVNQMT--FSPKVMQNNACTLKSVL-SDFGIQGEIVNVRPGPVITLYELEPA 369 Query: 1170 EEKFHSALDSFSDNISR 1186 S + SD+I+R Sbjct: 370 PGIKSSRIIGLSDDIAR 386 >gi|254781086|ref|YP_003065499.1| F0F1 ATP synthase subunit B' [Candidatus Liberibacter asiaticus str. psy62] Length = 176 Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 22/85 (25%) Query: 606 SDREKLFS--NSLARVQSHFEETIA---GHPQSIVDSISNSTNNLYDKIMVLAAALSESQ 660 SD+EK+ S + + S +EE++A H + I+D V+AAA + Sbjct: 60 SDQEKMDSAKREVESMISSYEESLAIARAHAKEIIDK-------------VVAAA----E 102 Query: 661 KSLDNSLKAHATDVVHKITNAENQL 685 ++L+ + D++HK++NA+N++ Sbjct: 103 QNLEFQREVFEKDLLHKLSNAQNEI 127 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.311 0.126 0.328 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,070,135 Number of Sequences: 1233 Number of extensions: 44649 Number of successful extensions: 329 Number of sequences better than 100.0: 36 Number of HSP's better than 100.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 170 Number of HSP's gapped (non-prelim): 57 length of query: 1828 length of database: 328,796 effective HSP length: 87 effective length of query: 1741 effective length of database: 221,525 effective search space: 385675025 effective search space used: 385675025 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 45 (21.9 bits)