HHsearch alignment for GI: 254781031 and conserved domain: PRK08384
>PRK08384 thiamine biosynthesis protein ThiI; Provisional.
Probab=99.45 E-value=2e-12 Score=96.08 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=86.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCC
Q ss_conf 59948999809656999999999749839999976778877727999999999999988875203561587501103224
Q gi|254781031|r 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDIS 86 (240)
Q Consensus 7 ~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (240)
T Consensus 178 s~Gk~l~LlSGGi-SPVAa~~mmKRG~~v~~vhf~~~~~---~~~----kv~~l~~~L~~y~-~~~~~~~~~~~------ 242 (310)
T PRK08384 178 TQGKMVGLLSDEL-SAVAIFLMMKRGVEVIPVHIGMGEK---NLE----KVRKLWNQLKKYS-YGSKGRLVVVK------ 242 (310)
T ss_pred CCCCEEEEECCCC-CHHHHHHHHHCCCEEEEEEECCCHH---HHH----HHHHHHHHHHHHC-CCCCEEEEEEC------
T ss_conf 7884899953886-3999999985698799998568878---999----9999999999867-99846999966------
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 44332220110001233101111111223337777774339936511454444345554430247777767753064321
Q gi|254781031|r 87 HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (240)
T Consensus 243 ----------------------------~~~~a~~ia~~~~~~alvTGEsLGQVASQT---------l~nl~~i~~~~~~ 285 (310)
T PRK08384 243 ----------------------------NFERVNKIIRDFGAKGVVKGLRPEQLASET---------LENIYEDSRMFDV 285 (310)
T ss_pred ----------------------------HHHHHHHHHHHHCCCEEEECCCHHHHHHHH---------HHHHHHHHHCCCC
T ss_conf ----------------------------599999999985998999774125545457---------9889999730488
Q ss_pred EEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 677531389889999999982820
Q gi|254781031|r 167 TVHTPLMWLKKYETWKLAQDIGGQ 190 (240)
Q Consensus 167 ~i~~P~~~~tK~eI~~~~~~~~~~ 190 (240)
T Consensus 286 PVlRPLIg~DK~EII~~Ar~IGTy 309 (310)
T PRK08384 286 PVYYPLIALPDEYIEKVKEKIGTF 309 (310)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 730385689989999999863889