HHsearch alignment for GI: 254781031 and conserved domain: TIGR00268
>TIGR00268 TIGR00268 conserved hypothetical protein TIGR00268; InterPro: IPR005232 This family of conserved hypothetical proteins has no known function but is predicted to be part of the wider PP-loop superfamily ..
Probab=99.12 E-value=8.4e-10 Score=79.81 Aligned_cols=164 Identities=18% Similarity=0.148 Sum_probs=104.4
Q ss_pred CHHHCC---CCCEEEEEECCHHHHHHHHHHHH-CCCEEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 122135---99489998096569999999997-49839999976778877-72799999999999998887520356158
Q gi|254781031|r 2 NDIIKK---APSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKDSLGEDHI 76 (240)
Q Consensus 2 ~~~~~~---~~~av~l~SGGlDS~~~l~~l~~-~~~~v~~i~~~ygq~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 76 (240)
T Consensus 6 ~~fl~~kf~nk~~~IAySGGvDS~lla~v~~~v~g~~~lait~~sP~~sp~~el~~A~~~----------A~~~g~~he~ 75 (263)
T TIGR00268 6 RNFLKEKFKNKKVLIAYSGGVDSSLLAAVCSDVAGTEVLAITVVSPSISPRRELEDAKAI----------AKEIGVKHEL 75 (263)
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHH----------HHHHCCCEEE
T ss_conf 889876764081699951746589999999875310113578762775735448999999----------9880830121
Q ss_pred EECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 75011032244433222011000123310111111122333777777433993651145444434555443024777776
Q gi|254781031|r 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET 156 (240)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (240)
T Consensus 76 ~~~d~~~n~-------------~f~~N~~~RCY~CK~~~~~~L~~~a~~~gy~~V~dGtN~dDL~~~RPG~~----A--- 135 (263)
T TIGR00268 76 VKIDKMANP-------------NFRANVEERCYFCKKKVLSILVKLAEKRGYDVVVDGTNADDLEDHRPGLR----A--- 135 (263)
T ss_pred ECCCCCCCC-------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHH----H---
T ss_conf 100123685-------------00168854441548889999899998639957982346200023675135----6---
Q ss_pred HHHHCCCCCEEEEEEE--CCCCHHHHHHHHHHHCCCHHCCCCHHHCCCCC
Q ss_conf 7753064321677531--38988999999998282000143255372162
Q gi|254781031|r 157 AINLGMESHVTVHTPL--MWLKKYETWKLAQDIGGQDLVNLILEESHTCY 204 (240)
Q Consensus 157 ~~~~~~~~~~~i~~P~--~~~tK~eI~~~~~~~~~~~~~~~~~~~T~SC~ 204 (240)
T Consensus 136 -~~E~~g----~~SP~aef~I~K~eir~ia~~lg-~~~~DKP---~~~CL 176 (263)
T TIGR00268 136 -VKELNG----VYSPWAEFGITKKEIREIAKSLG-LSFYDKP---SEACL 176 (263)
T ss_pred -HHHCCC----CCCCCCCCCCCHHHHHHHHHHCC-CCCCCCC---CCCHH
T ss_conf -766078----86872002568799999999748-8988886---62102