HHsearch alignment for GI: 254781031 and conserved domain: TIGR00268

>TIGR00268 TIGR00268 conserved hypothetical protein TIGR00268; InterPro: IPR005232 This family of conserved hypothetical proteins has no known function but is predicted to be part of the wider PP-loop superfamily ..
Probab=99.12  E-value=8.4e-10  Score=79.81  Aligned_cols=164  Identities=18%  Similarity=0.148  Sum_probs=104.4

Q ss_pred             CHHHCC---CCCEEEEEECCHHHHHHHHHHHH-CCCEEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf             122135---99489998096569999999997-49839999976778877-72799999999999998887520356158
Q gi|254781031|r    2 NDIIKK---APSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKDSLGEDHI   76 (240)
Q Consensus         2 ~~~~~~---~~~av~l~SGGlDS~~~l~~l~~-~~~~v~~i~~~ygq~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~   76 (240)
T Consensus         6 ~~fl~~kf~nk~~~IAySGGvDS~lla~v~~~v~g~~~lait~~sP~~sp~~el~~A~~~----------A~~~g~~he~   75 (263)
T TIGR00268         6 RNFLKEKFKNKKVLIAYSGGVDSSLLAAVCSDVAGTEVLAITVVSPSISPRRELEDAKAI----------AKEIGVKHEL   75 (263)
T ss_pred             HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHH----------HHHHCCCEEE
T ss_conf             889876764081699951746589999999875310113578762775735448999999----------9880830121


Q ss_pred             EECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             75011032244433222011000123310111111122333777777433993651145444434555443024777776
Q gi|254781031|r   77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET  156 (240)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  156 (240)
T Consensus        76 ~~~d~~~n~-------------~f~~N~~~RCY~CK~~~~~~L~~~a~~~gy~~V~dGtN~dDL~~~RPG~~----A---  135 (263)
T TIGR00268        76 VKIDKMANP-------------NFRANVEERCYFCKKKVLSILVKLAEKRGYDVVVDGTNADDLEDHRPGLR----A---  135 (263)
T ss_pred             ECCCCCCCC-------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHH----H---
T ss_conf             100123685-------------00168854441548889999899998639957982346200023675135----6---


Q ss_pred             HHHHCCCCCEEEEEEE--CCCCHHHHHHHHHHHCCCHHCCCCHHHCCCCC
Q ss_conf             7753064321677531--38988999999998282000143255372162
Q gi|254781031|r  157 AINLGMESHVTVHTPL--MWLKKYETWKLAQDIGGQDLVNLILEESHTCY  204 (240)
Q Consensus       157 ~~~~~~~~~~~i~~P~--~~~tK~eI~~~~~~~~~~~~~~~~~~~T~SC~  204 (240)
T Consensus       136 -~~E~~g----~~SP~aef~I~K~eir~ia~~lg-~~~~DKP---~~~CL  176 (263)
T TIGR00268       136 -VKELNG----VYSPWAEFGITKKEIREIAKSLG-LSFYDKP---SEACL  176 (263)
T ss_pred             -HHHCCC----CCCCCCCCCCCHHHHHHHHHHCC-CCCCCCC---CCCHH
T ss_conf             -766078----86872002568799999999748-8988886---62102