HHsearch alignment for GI: 254781031 and conserved domain: TIGR00552
>TIGR00552 nadE NAD+ synthetase; InterPro: IPR003694 NAD+ synthase (6.3.5.1 from EC) catalyzes the last step in the biosynthesis of nicotinamide adenine dinucleotide and is induced by stress factors such as heat shock and glucose limitation. The three-dimensional structure of NH3-dependent NAD+ synthetase from Bacillus subtilis, in its free form and in complex with ATP shows that the enzyme consists of a tight homodimer with alpha/beta subunit topology .; GO: 0003952 NAD+ synthase (glutamine-hydrolyzing) activity, 0005524 ATP binding, 0009435 NAD biosynthetic process.
Probab=95.02 E-value=0.11 Score=29.55 Aligned_cols=153 Identities=16% Similarity=0.120 Sum_probs=72.2
Q ss_pred CCCCEEEEEECCHHH--------HHHHHHHHHCCC--EEEEEEEECCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 599489998096569--------999999997498--399999767788-777279999999999999888752035615
Q gi|254781031|r 7 KAPSALLLFSGGQDS--------STCLSWALDRFD--RVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDSLGEDH 75 (240)
Q Consensus 7 ~~~~av~l~SGGlDS--------~~~l~~l~~~~~--~v~~i~~~ygq~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 75 (240)
T Consensus 25 ~~~g~v~GlsGG~ds~l~g~l~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~a~~~~~~~~----------~~~~ 94 (286)
T TIGR00552 25 GAKGVVLGLSGGVDSTLAGKLCQAVVAALCVEALGKEQNHALLLPHSNTTPEDDVQDALALAEPLG----------INYK 94 (286)
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHCC----------CCCE
T ss_conf 765046730476203567789999999999850461142033214667884121799999887405----------4421
Q ss_pred EEECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 87501103224443322201100012331011111112233377777743399365114544443455544302477777
Q gi|254781031|r 76 ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE 155 (240)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 155 (240)
T Consensus 95 ~~~~~~~~~~~~~~~~------~~~~~~~-~~~~gn~~~r~r~~~~y~~a~~~~~lv~gt~n~~-----e~~~Gy~t~-- 160 (286)
T TIGR00552 95 TIDIAPIAASFQAQTE------TGDPLAD-FLAEGNLKARLRMALLYAHANKHNLLVLGTGNKS-----ELLLGYFTK-- 160 (286)
T ss_pred ECCCHHHHHHHHHHHC------CCCCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHH-----HHHHHHHHH--
T ss_conf 1130467788776420------3443331-0233222478899999887310163564046134-----454320010--
Q ss_pred HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 6775306432167753138988999999998282
Q gi|254781031|r 156 TAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189 (240)
Q Consensus 156 ~~~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~~~ 189 (240)
T Consensus 161 ------~Gdg~~d~~p~~~l~k~~~~~l~~~l~~ 188 (286)
T TIGR00552 161 ------YGDGGCDILPLGGLFKTEVYELAKRLGV 188 (286)
T ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf ------1442000345532237889999998175