HHsearch alignment for GI: 254781031 and conserved domain: TIGR01536
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing); InterPro: IPR006426 These sequences represent glutamine-hydrolysing asparagine synthase. The group have a poorly conserved C-terminal extension while bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis .; GO: 0004066 asparagine synthase (glutamine-hydrolyzing) activity, 0006529 asparagine biosynthetic process.
Probab=97.55 E-value=0.00029 Score=45.47 Aligned_cols=126 Identities=20% Similarity=0.201 Sum_probs=67.3
Q ss_pred HHCCCCCEEEEEECCHHHHHHHHHHHHCC--------CEEEEEEEECC--CCCCCCHH--------HHHHHHHHHHHHHH
Q ss_conf 21359948999809656999999999749--------83999997677--88777279--------99999999999988
Q gi|254781031|r 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF--------DRVETLSFDYG--QRNKVELE--------CRLCVRKKIVELMP 65 (240)
Q Consensus 4 ~~~~~~~av~l~SGGlDS~~~l~~l~~~~--------~~v~~i~~~yg--q~~~~~~~--------~a~~~~~~~~~~~~ 65 (240)
T Consensus 308 l~aDvpvG-~~LSGGlDSS~vaa~a~~~~~~~~~~W~~~~~tFsigf~~~~~~~~Es~l~P~~D~P~A~~vA~~~G~~-- 384 (646)
T TIGR01536 308 LVADVPVG-VLLSGGLDSSLVAAIARREAPSEGVDWKGPVKTFSIGFEGDSKDFDESKLRPDDDQPYARKVADELGTE-- 384 (646)
T ss_pred CCCCCCEE-EEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHCCC--
T ss_conf 20056068-887171679999999999767643311774347886517787653002578998618999999984983--
Q ss_pred HHHHCCCCCEEEECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCCCC-CCCC
Q ss_conf 8752035615875011032244433222011000123310111111122333777777433-9936511454444-3455
Q gi|254781031|r 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-GITNIVIGVCETD-YSGY 143 (240)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-g~~~i~~~~~~~~-~~~~ 143 (240)
T Consensus 385 --------h~~~~~s~~e~-------~~~l~~v~~~~e~y~p~~~~~~~P~Yl~s~~ar~~Tg~kV~LSGeGaDElFgGY 449 (646)
T TIGR01536 385 --------HHEVLISEEEV-------LKALPEVIYHLETYDPTAIRASIPLYLLSKLAREDTGVKVVLSGEGADELFGGY 449 (646)
T ss_pred --------CEEEEECHHHH-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCH
T ss_conf --------24898458999-------999888765424885430311235899999999628838997486635553042
Q ss_pred CCCC
Q ss_conf 5443
Q gi|254781031|r 144 PDCR 147 (240)
Q Consensus 144 ~~~~ 147 (240)
T Consensus 450 ~~f~ 453 (646)
T TIGR01536 450 EYFR 453 (646)
T ss_pred HHHC
T ss_conf 4421