HHsearch alignment for GI: 254781031 and conserved domain: TIGR03183
>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC. Members of this protein family are the DndC protein from the dnd (degradation during electrophoresis) operon. The dnd phenotype reflects a sulfur-containing modification to DNA. This operon is sparsely and sporadically distributed among bactera; among the first eight examples are members from the Actinobacteria, Firmicutes, Gammaproteobacteria, Cyanobacteria. DndC is suggested to be a sulfurtransferase.
Probab=98.04 E-value=3.6e-05 Score=51.09 Aligned_cols=170 Identities=12% Similarity=0.048 Sum_probs=79.4
Q ss_pred EEEEEECCHHHHHHHHHHH---------HCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE-EECH
Q ss_conf 8999809656999999999---------74983999997677887772799999999999998887520356158-7501
Q gi|254781031|r 11 ALLLFSGGQDSSTCLSWAL---------DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI-LPLA 80 (240)
Q Consensus 11 av~l~SGGlDS~~~l~~l~---------~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 80 (240)
T Consensus 16 WvIGySGGKDSTavLqLvw~Al~~Lp~e~r~K~v~VIssDTlVEnP~V~~~v~~~L~~i~~~a~~~---~LPi~~~~~~P 92 (447)
T TIGR03183 16 WVIGYSGGKDSTAVLQLVWNALSELPPEQRTKKIHVISTDTLVENPIVAAWVNVSLERMQEAAQKQ---GLPIEPHRLTP 92 (447)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCEEEEECC
T ss_conf 799758773999999999999984788757688899979987557799999999999999999974---99823689337
Q ss_pred HHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHH--HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHH---HH
Q ss_conf 10322444332220110001233101111111--22333777777433993651145444434555443024777---77
Q gi|254781031|r 81 ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN--IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRA---IE 155 (240)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~---~~ 155 (240)
T Consensus 93 ~~~---dtFWvnlIGrGYPaP~~~FRWCTdrLKI~P~~~fi~~~v~~~ge~ilvLGtR~~ES~~-Ra~~i~k~e~~~~~~ 168 (447)
T TIGR03183 93 AIE---DTFWVNLIGKGYPAPRQKFRWCTDRLKISPSNTFIRDKVAANGEVILVLGTRKNESQA-RAAVMEKHEGGSTRD 168 (447)
T ss_pred CCC---CCHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEECCHHHHHH-HHHHHHHHHCCCCHH
T ss_conf 854---4300010346307999876525576636828999998652149689999565277799-999999864467042
Q ss_pred HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHH
Q ss_conf 67753064321677531389889999999982
Q gi|254781031|r 156 TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187 (240)
Q Consensus 156 ~~~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~ 187 (240)
T Consensus 169 ~ls~h~~l~n~~vy~PI~dws~ddVW~yL~~~ 200 (447)
T TIGR03183 169 RLSRNSSLPNSWVYTPIEDWSNDDVWMYLLQN 200 (447)
T ss_pred HCCCCCCCCCCEEECCHHHCCHHHHHHHHCCC
T ss_conf 12768888883797306747640899986338