HHsearch alignment for GI: 254781031 and conserved domain: TIGR03183

>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC. Members of this protein family are the DndC protein from the dnd (degradation during electrophoresis) operon. The dnd phenotype reflects a sulfur-containing modification to DNA. This operon is sparsely and sporadically distributed among bactera; among the first eight examples are members from the Actinobacteria, Firmicutes, Gammaproteobacteria, Cyanobacteria. DndC is suggested to be a sulfurtransferase.
Probab=98.04  E-value=3.6e-05  Score=51.09  Aligned_cols=170  Identities=12%  Similarity=0.048  Sum_probs=79.4

Q ss_pred             EEEEEECCHHHHHHHHHHH---------HCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE-EECH
Q ss_conf             8999809656999999999---------74983999997677887772799999999999998887520356158-7501
Q gi|254781031|r   11 ALLLFSGGQDSSTCLSWAL---------DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI-LPLA   80 (240)
Q Consensus        11 av~l~SGGlDS~~~l~~l~---------~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~   80 (240)
T Consensus        16 WvIGySGGKDSTavLqLvw~Al~~Lp~e~r~K~v~VIssDTlVEnP~V~~~v~~~L~~i~~~a~~~---~LPi~~~~~~P   92 (447)
T TIGR03183        16 WVIGYSGGKDSTAVLQLVWNALSELPPEQRTKKIHVISTDTLVENPIVAAWVNVSLERMQEAAQKQ---GLPIEPHRLTP   92 (447)
T ss_pred             EEEECCCCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCEEEEECC
T ss_conf             799758773999999999999984788757688899979987557799999999999999999974---99823689337


Q ss_pred             HHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHH--HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHH---HH
Q ss_conf             10322444332220110001233101111111--22333777777433993651145444434555443024777---77
Q gi|254781031|r   81 ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN--IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRA---IE  155 (240)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~---~~  155 (240)
T Consensus        93 ~~~---dtFWvnlIGrGYPaP~~~FRWCTdrLKI~P~~~fi~~~v~~~ge~ilvLGtR~~ES~~-Ra~~i~k~e~~~~~~  168 (447)
T TIGR03183        93 AIE---DTFWVNLIGKGYPAPRQKFRWCTDRLKISPSNTFIRDKVAANGEVILVLGTRKNESQA-RAAVMEKHEGGSTRD  168 (447)
T ss_pred             CCC---CCHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEECCHHHHHH-HHHHHHHHHCCCCHH
T ss_conf             854---4300010346307999876525576636828999998652149689999565277799-999999864467042


Q ss_pred             HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHH
Q ss_conf             67753064321677531389889999999982
Q gi|254781031|r  156 TAINLGMESHVTVHTPLMWLKKYETWKLAQDI  187 (240)
Q Consensus       156 ~~~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~  187 (240)
T Consensus       169 ~ls~h~~l~n~~vy~PI~dws~ddVW~yL~~~  200 (447)
T TIGR03183       169 RLSRNSSLPNSWVYTPIEDWSNDDVWMYLLQN  200 (447)
T ss_pred             HCCCCCCCCCCEEECCHHHCCHHHHHHHHCCC
T ss_conf             12768888883797306747640899986338