HHsearch results for GI: 254781031 and protein with PDBid: 1kqp_A
>1kqp_A NAD+ synthase;, NH(3)-dependent NAD(+) synthetase; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=98.27 E-value=6.9e-06 Score=54.22 Aligned_cols=155 Identities=14% Similarity=0.044 Sum_probs=69.7
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC---------CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 5994899980965699999999974---------9839999976778877727999999999999988875203561587
Q gi|254781031|r 7 KAPSALLLFSGGQDSSTCLSWALDR---------FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHIL 77 (240)
Q Consensus 7 ~~~~av~l~SGGlDS~~~l~~l~~~---------~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 77 (240)
..+++|+-+|||+||+++|+++.+. ...++++..-++.. ...+.+...++.+. ......+
T Consensus 37 g~~~vVvGlSGGIDSav~A~L~~~a~~~~~~~~g~~~v~~v~mp~~~~--~~~~da~~~~~~~~---------~~~~~~i 105 (271)
T 1kqp_A 37 GAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQ--QDEDDAQLALKFIK---------PDKSWKF 105 (271)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSC--TTHHHHHHHHHHHC---------CSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--CCHHHHHHHHHHHC---------CCCEEEE
T ss_conf 898199979888889999999999999887606885799984687676--56999999998607---------6651686
Q ss_pred ECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 50110322444332220110001233101111111223337777774339936511454444345554430247777767
Q gi|254781031|r 78 PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157 (240)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (240)
++...-.......... ..........-.....+.......++...|...+.++-..+...++-..
T Consensus 106 ~I~~~~~~~~~~~~~~----~~~~~~~~~~~NiqaRiR~~~Ly~~An~~g~lvlgTgNksE~~~Gy~Tk----------- 170 (271)
T 1kqp_A 106 DIKSTVSAFSDQYQQE----TGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTK----------- 170 (271)
T ss_dssp CCHHHHHHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHTTTCSCT-----------
T ss_pred CCHHHHHHHHHHHHHH----CCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEE-----------
T ss_conf 4088886766531121----0234321445254214455899876643696698389710201001677-----------
Q ss_pred HHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf 7530643216775313898899999999828200
Q gi|254781031|r 158 INLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191 (240)
Q Consensus 158 ~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~~~~~ 191 (240)
.+....-++|...++|.||.++++.+|.+.
T Consensus 171 ----yGD~~~di~Pi~~L~K~eV~~la~~lgiP~ 200 (271)
T 1kqp_A 171 ----YGDGGADLLPLTGLTKRQGRTLLKELGAPE 200 (271)
T ss_dssp ----TTTTCCSBCTTTTCCHHHHHHHHHHTTCCT
T ss_pred ----CCCCCCCCCCCCCCCHHHHHHHHHHHCCCH
T ss_conf ----587874513233577899999999839987