HHsearch results for GI: 254781031 and protein with PDBid: 1kqp_A

>1kqp_A NAD+ synthase;, NH(3)-dependent NAD(+) synthetase; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=98.27  E-value=6.9e-06  Score=54.22  Aligned_cols=155  Identities=14%  Similarity=0.044  Sum_probs=69.7

Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHHC---------CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             5994899980965699999999974---------9839999976778877727999999999999988875203561587
Q gi|254781031|r    7 KAPSALLLFSGGQDSSTCLSWALDR---------FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHIL   77 (240)
Q Consensus         7 ~~~~av~l~SGGlDS~~~l~~l~~~---------~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~   77 (240)
                      ..+++|+-+|||+||+++|+++.+.         ...++++..-++..  ...+.+...++.+.         ......+
T Consensus        37 g~~~vVvGlSGGIDSav~A~L~~~a~~~~~~~~g~~~v~~v~mp~~~~--~~~~da~~~~~~~~---------~~~~~~i  105 (271)
T 1kqp_A           37 GAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQ--QDEDDAQLALKFIK---------PDKSWKF  105 (271)
T ss_dssp             TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSC--TTHHHHHHHHHHHC---------CSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--CCHHHHHHHHHHHC---------CCCEEEE
T ss_conf             898199979888889999999999999887606885799984687676--56999999998607---------6651686


Q ss_pred             ECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             50110322444332220110001233101111111223337777774339936511454444345554430247777767
Q gi|254781031|r   78 PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA  157 (240)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (240)
                      ++...-..........    ..........-.....+.......++...|...+.++-..+...++-..           
T Consensus       106 ~I~~~~~~~~~~~~~~----~~~~~~~~~~~NiqaRiR~~~Ly~~An~~g~lvlgTgNksE~~~Gy~Tk-----------  170 (271)
T 1kqp_A          106 DIKSTVSAFSDQYQQE----TGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTK-----------  170 (271)
T ss_dssp             CCHHHHHHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHTTTCSCT-----------
T ss_pred             CCHHHHHHHHHHHHHH----CCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEE-----------
T ss_conf             4088886766531121----0234321445254214455899876643696698389710201001677-----------


Q ss_pred             HHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf             7530643216775313898899999999828200
Q gi|254781031|r  158 INLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD  191 (240)
Q Consensus       158 ~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~~~~~  191 (240)
                          .+....-++|...++|.||.++++.+|.+.
T Consensus       171 ----yGD~~~di~Pi~~L~K~eV~~la~~lgiP~  200 (271)
T 1kqp_A          171 ----YGDGGADLLPLTGLTKRQGRTLLKELGAPE  200 (271)
T ss_dssp             ----TTTTCCSBCTTTTCCHHHHHHHHHHTTCCT
T ss_pred             ----CCCCCCCCCCCCCCCHHHHHHHHHHHCCCH
T ss_conf             ----587874513233577899999999839987