HHsearch results for GI: 254781031 and protein with PDBid: 1ni5_A
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATP, ATPase, PP-type, PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=99.18 E-value=1.2e-10 Score=83.83 Aligned_cols=158 Identities=12% Similarity=0.018 Sum_probs=85.4
Q ss_pred CHHHCCCCCEEEEEECCHHHHHHHHHHHH-----CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 12213599489998096569999999997-----4983999997677887772799999999999998887520356158
Q gi|254781031|r 2 NDIIKKAPSALLLFSGGQDSSTCLSWALD-----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76 (240)
Q Consensus 2 ~~~~~~~~~av~l~SGGlDS~~~l~~l~~-----~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 76 (240)
|..+-+++|.+|.+|||.||+++|+.|.+ .+.++.++|+|+|-|..+..+ + +.+...+. ....+.+.
T Consensus 7 ~~~~~~~~~vlva~SGG~DS~~ll~~l~~~~~~~~~~~~~~~h~~h~~r~~s~~~-~----~~v~~~~~---~~~i~~~~ 78 (433)
T 1ni5_A 7 NRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAW-V----THCENVCQ---QWQVPLVV 78 (433)
T ss_dssp HHHHTTCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHH-H----HHHHHHHH---HTTCCEEE
T ss_pred HHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHH-H----HHHHHHHH---HCCCCEEE
T ss_conf 4325899829999818099999999999989758998199999829889557999-9----99999999---75997899
Q ss_pred EECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 75011032244433222011000123310111111122333777777433993651145444434555443024777776
Q gi|254781031|r 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET 156 (240)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (240)
..... .. . ...........|...+ .+...+...+.++.+.+|..- ..++.....
T Consensus 79 ~~~~~-~~--~------------~~~~e~~aR~~Ry~~~------~~~~~~~~~i~~aHh~dD~~E-----t~l~~l~rg 132 (433)
T 1ni5_A 79 ERVQL-AQ--E------------GLGIEAQARQARYQAF------ARTLLPGEVLVTAQHLDDQCE-----TFLLALKRG 132 (433)
T ss_dssp ECCCC-CC--S------------SSTTTTHHHHHHHHHH------HHTCCTTEEEECCCCHHHHHH-----HHHHHHTTT
T ss_pred EEEEC-CC--C------------CCCHHHHHHHHHHHHH------HHHHCCCCEEEEEEECHHHHH-----HHHHHHHCC
T ss_conf 99964-78--8------------8887999999999987------865416570322001103899-----999987257
Q ss_pred HH--H------HCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHC
Q ss_conf 77--5------3064321677531389889999999982820001
Q gi|254781031|r 157 AI--N------LGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193 (240)
Q Consensus 157 ~~--~------~~~~~~~~i~~P~~~~tK~eI~~~~~~~~~~~~~ 193 (240)
.- . ........+++|++..+|.||.+.+.+.+.+...
T Consensus 133 ~~~~gl~~~~~~~~~~~~~i~RPlL~~~k~ei~~y~~~~~i~~~e 177 (433)
T 1ni5_A 133 SGPAGLSAMAEVSEFAGTRLIRPLLARTRGELVQWARQYDLRWIE 177 (433)
T ss_dssp CCTTGGGCCCSEEEETTEEEECGGGSCCHHHHHHHHHHTTCCCBC
T ss_pred CCCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 764334343222115785088750018699999998746776203