HHsearch results for GI: 254781031 and protein with PDBid: 1vl2_A
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=99.31 E-value=2.7e-11 Score=87.69 Aligned_cols=166 Identities=12% Similarity=0.004 Sum_probs=89.8
Q ss_pred CHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHH
Q ss_conf 12213599489998096569999999997498399999767788777279999999999999888752035615875011
Q gi|254781031|r 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAI 81 (240)
Q Consensus 2 ~~~~~~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (240)
.+.+.+++|+|+.|||||||++++.||+++|++|++++.|.||.. +.+.....+ .+... ..+++++...
T Consensus 8 ~~~~~Mk~KVvlAySGGLDTSv~l~~L~e~g~eVi~~~~d~Gq~e--d~~~~~~kA-------~~~GA--~~~~v~D~r~ 76 (421)
T 1vl2_A 8 HHHHHMKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQKD--DFVAIKEKA-------LKTGA--SKVYVEDLRR 76 (421)
T ss_dssp ------CCEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEESSCCC--CHHHHHHHH-------HHHTC--SEEEEEECHH
T ss_pred CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCHH--HHHHHHHHH-------HHHCC--CEEEEECHHH
T ss_conf 101255370999938874899999999877997999999799767--789999999-------98499--6899986099
Q ss_pred HCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 03224443322201100012331011111112233377777743399365114544443455544302477777677530
Q gi|254781031|r 82 LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161 (240)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (240)
.-..............+... .....+..-........-+|...|+..+..|...-+- .--+|..... .
T Consensus 77 ef~~~~i~p~I~ana~ye~~--Y~l~tslaRplia~~~v~~A~~~ga~~iaHG~TGkGN-----DQvRFe~~~~-----a 144 (421)
T 1vl2_A 77 EFVTDYIFTALLGNAMYEGR--YLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGN-----DQVRFELTYA-----A 144 (421)
T ss_dssp HHHHHTHHHHHTTTCCBTTT--BCCHHHHHHHHHHHHHHHHHHHHTCSEEECCCCTTSS-----HHHHHHHHHH-----H
T ss_pred HHHHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC-----CCCHHHHHHH-----H
T ss_conf 99999999999668876786--5342111158999999999997087488336524777-----5410777798-----7
Q ss_pred CCCCEEEEEEECCC-------CHHHHHHHHHHHCCC
Q ss_conf 64321677531389-------889999999982820
Q gi|254781031|r 162 MESHVTVHTPLMWL-------KKYETWKLAQDIGGQ 190 (240)
Q Consensus 162 ~~~~~~i~~P~~~~-------tK~eI~~~~~~~~~~ 190 (240)
......|++|+..+ +..+.+..+++.|.+
T Consensus 145 L~p~~~iiaP~R~~~~~~~~~~R~~~i~ya~~~gI~ 180 (421)
T 1vl2_A 145 LNPNLKVISPWKDPEFLAKFKGRTDLINYAMEKGIP 180 (421)
T ss_dssp HCTTSEEECGGGCHHHHHHTC--CHHHHHHHHHTCC
T ss_pred HCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC
T ss_conf 289763158566665654201199999999975999