HHsearch results for GI: 254781031 and protein with PDBid: 3bl5_A
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=100.00 E-value=3.8e-41 Score=272.88 Aligned_cols=209 Identities=45% Similarity=0.937 Sum_probs=163.5
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCC-C
Q ss_conf 994899980965699999999974983999997677887772799999999999998887520356158750110322-4
Q gi|254781031|r 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDI-S 86 (240)
Q Consensus 8 ~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 86 (240)
++|||+|||||+||+++||+|+++|++|++|||||||+|..+...+....+. .....+.......... .
T Consensus 3 k~k~vvl~SGGlDS~~~a~~l~~~g~~v~~l~~~ygq~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 72 (219)
T 3bl5_A 3 KEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVEVAKSIAEK----------LGVKNHLLDMSLLNQLAP 72 (219)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSCTTCHHHHHHHHHHHT----------TCCCEEEEECGGGGGGST
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHH----------HHHHCCCCHHHHHHHHCC
T ss_conf 7739999588188999999999879969999998886421045778999998----------520001110334444202
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 44332220110001233101111111223337777774339936511454444345554430247777767753064321
Q gi|254781031|r 87 HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (240)
....................+++.++..++.++..++...++..+.++....+...++++++.|.+.++++...+....+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 152 (219)
T 3bl5_A 73 NALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPF 152 (219)
T ss_dssp GGGC--------------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCC----CCGGGSHHHHHHHHHHHHHHHTSCC
T ss_pred CCCCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
T ss_conf 42111203544301455534786103677789999988603441574225666557899837899999999974445503
Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 677531389889999999982820001432553721628886555566889986877899999999730
Q gi|254781031|r 167 TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235 (240)
Q Consensus 167 ~i~~P~~~~tK~eI~~~~~~~~~~~~~~~~~~~T~SC~~~~~~~~~~~~~hCG~C~~C~~R~~af~~~~ 235 (240)
++++||+++||.||++.+.+++. ++.+++.|||||+|.. ..|||+|++|++||+||.|+=
T Consensus 153 ~~~~P~~~~~K~eii~~~~~~~~---~~~~~~~T~SC~~~~~------~~~CG~C~~C~~R~~af~e~~ 212 (219)
T 3bl5_A 153 VIHTPLMWLNKAETWKLADELGA---LDFVKNNTLTCYNGII------ADGCGECPACHLRSKGYEEYM 212 (219)
T ss_dssp EEECTTTTCCHHHHHHHHHHTTC---HHHHHHHCCCSTTSCC------SSCCSCSHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCHHHHHHHHHHCCC---CCCCCCCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHH
T ss_conf 89724003729999999998289---5501200773689899------998977860898999999999