HHsearch results for GI: 254781031 and protein with PDBid: 3k32_A
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.30 E-value=4.2e-11 Score=86.57 Aligned_cols=152 Identities=19% Similarity=0.162 Sum_probs=83.0
Q ss_pred HHHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH
Q ss_conf 22135994899980965699999999974983999997677887772799999999999998887520356158750110
Q gi|254781031|r 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAIL 82 (240)
Q Consensus 3 ~~~~~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
..||. .|.+|+||||+||+++|+++.+.|++++++|+++|+.+.. +.+..+++++ ..+++.+.....
T Consensus 2 ~~~k~-~kv~V~~SGG~DS~~la~ll~~~g~~v~~v~~~~~~~~~~--~~a~~~a~~l----------gi~~~~~~~~~~ 68 (203)
T 3k32_A 2 NAMKL-MDVHVLFSGGKDSSLSAVILKKLGYNPHLITINFGVIPSY--KLAEETAKIL----------GFKHKVITLDRK 68 (203)
T ss_dssp ----C-EEEEEECCCSHHHHHHHHHHHHTTEEEEEEEEECSSSCTT--HHHHHHHHHH----------TCEEEEEECCTH
T ss_pred CCCCC-CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHH--HHHHHHHHHH----------CCCEEEEECCHH
T ss_conf 85533-7089995587899999999997199769999879951478--9999999996----------997189857899
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 32244433222011000123310111111122333777777433993651145444434555443024777776775306
Q gi|254781031|r 83 GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM 162 (240)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (240)
. . ........... .|......+..........+...++.|.+.+|...+- +...... ...
T Consensus 69 ~--~----~~~~~~~~~~~------~~~~~~~~~~~~~~~~~a~~~~~i~tGh~~dD~~e~~-----~~~~~~~---~~~ 128 (203)
T 3k32_A 69 I--V----EKAADMIIEHK------YPGPAIQYVHKTVLEILADEYSILADGTRRDDRVPKL-----SYSEIQS---LEM 128 (203)
T ss_dssp H--H----HHHHHHHHHHS------SSHHHHHHHHHHHHHHHTTTCSEEECCCCTTCCSSCC-----CHHHHHH---HHH
T ss_pred H--H----HHHHHHHHHCC------CHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCC-----HHHHHCC---CCH
T ss_conf 9--9----88999998469------8249999999999999966999999728807775412-----0877145---202
Q ss_pred CCCEEEEEEECCCCHHHHHHHHHHH
Q ss_conf 4321677531389889999999982
Q gi|254781031|r 163 ESHVTVHTPLMWLKKYETWKLAQDI 187 (240)
Q Consensus 163 ~~~~~i~~P~~~~tK~eI~~~~~~~ 187 (240)
...+.+.+|+.+.+|.||.+.+.++
T Consensus 129 ~~~~~~~rPL~~~~k~ei~~~a~~~ 153 (203)
T 3k32_A 129 RKNIQYITPLMGFGYKTLRHLASEF 153 (203)
T ss_dssp HHTCEEECGGGGCCHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHC
T ss_conf 2100002533598999999999970