HHsearch results for GI: 254781031 and protein with PDBid: 3p52_A
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni}
Probab=98.85 E-value=1.2e-08 Score=71.28 Aligned_cols=151 Identities=17% Similarity=0.099 Sum_probs=74.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC-CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCC
Q ss_conf 5994899980965699999999974-983999997677887772799999999999998887520356158750110322
Q gi|254781031|r 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDI 85 (240)
Q Consensus 7 ~~~~av~l~SGGlDS~~~l~~l~~~-~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (240)
..+++|+.+|||+||+++|.++.+. +.++++++++.+.....+.+.+...++. ....+..+........
T Consensus 25 g~~~vvlglSGGVDSsv~a~La~~al~~~v~~v~~~~~~~~~~~~~~a~~la~~----------lgi~~~~~~~~~~~~~ 94 (249)
T 3p52_A 25 QSQGVVLGLSGGIDSALVATLCKRALKENVFALLMPTQISNKANLEDALRLCAD----------LNLEYKIIEIQSILDA 94 (249)
T ss_dssp SCSEEEEECCSSHHHHHHHHHHHHHHTTSEEEEECCSCCSSCHHHHHHHHHHHH----------HTCEEEECCCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH----------HCCCCCEEHHHHHHHH
T ss_conf 998299978898899999999998448717998578411000689999999998----------1776000001468888
Q ss_pred CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 44433222011000123310111111122333777777433993651145444434555443024777776775306432
Q gi|254781031|r 86 SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165 (240)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (240)
........ ...................++...+. +..+... ..++..- . ....+..
T Consensus 95 ~~~~~~~~---------~~~~~~n~~ar~r~~~l~~~a~~~~~--~v~~t~n---------kse~~~G---~-~tk~gd~ 150 (249)
T 3p52_A 95 FIKQSENT---------TLVSLGNFAARIRMSLLYDYSALKNS--LVIGTSN---------KSELLLG---Y-GTIYGDL 150 (249)
T ss_dssp HHTTCSCC---------CHHHHHHHHHHHHHHHHHHHHHHTTE--EEBCCCC---------HHHHHHT---C-SCTTTTT
T ss_pred HHHCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHCCC--EEECCCC---------HHHHHCC---C-HHHHHHC
T ss_conf 75100100---------04678899998878999876635285--5767885---------5545257---3-2235315
Q ss_pred EEEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf 16775313898899999999828200
Q gi|254781031|r 166 VTVHTPLMWLKKYETWKLAQDIGGQD 191 (240)
Q Consensus 166 ~~i~~P~~~~tK~eI~~~~~~~~~~~ 191 (240)
...+.|+.+++|.||.++++.+|.+.
T Consensus 151 ~~~~~Pl~~L~K~eVr~La~~lg~p~ 176 (249)
T 3p52_A 151 ACAFNPIGSLYKSEIYALAKYLNLHE 176 (249)
T ss_dssp CCSEETTTTSCHHHHHHHHHHTTCCH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCHH
T ss_conf 65200157978999999999969819