HHSEARCH alignment of GI: 254781031 and SCOP domain: d1k92a1

Alignment
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.51  E-value=9.4e-14  Score=101.50  Aligned_cols=166  Identities=11%  Similarity=0.018  Sum_probs=86.9

Q ss_pred             HHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHC
Q ss_conf             21359948999809656999999999749839999976778877727999999999999988875203561587501103
Q gi|254781031|r    4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILG   83 (240)
Q Consensus         4 ~~~~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (240)
                      -++..+|+||.||||+||+++|++|++.|+++++++++|||++....+.........         .......+......
T Consensus         6 ~~~~gkKv~vA~SGGvDSsvll~lL~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~   76 (188)
T d1k92a1           6 HLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEY---------GAENARLIDCRKQL   76 (188)
T ss_dssp             SCCTTSEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCTTCSCTTHHHHHHHHH---------TCSEEEEEECHHHH
T ss_pred             CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHC---------CCCCCCCCCHHHHH
T ss_conf             389999899995797799999999998599473985105797067788899999970---------53123552054434


Q ss_pred             CCCCCCC-CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             2244433-222011000123310111111122333777777433993651145444434555443024777776775306
Q gi|254781031|r   84 DISHSSL-TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM  162 (240)
Q Consensus        84 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (240)
                      ....... ................................+...+...+..+.......     ...+..     .....
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~~  146 (188)
T d1k92a1          77 VAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGND-----IERFYR-----YGLLT  146 (188)
T ss_dssp             HHHHHHHHHHTCCCCEETTEECCCHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTSSH-----HHHHHH-----HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC-----CCCCHH-----HHHHH
T ss_conf             66421599999999987078356403778899999999999983833554341133234-----333105-----77751


Q ss_pred             CCCEEEEEEECC-------CCHHHHHHHHHHHC
Q ss_conf             432167753138-------98899999999828
Q gi|254781031|r  163 ESHVTVHTPLMW-------LKKYETWKLAQDIG  188 (240)
Q Consensus       163 ~~~~~i~~P~~~-------~tK~eI~~~~~~~~  188 (240)
                      .....+++|++.       .+|.||++.+.+.|
T Consensus       147 ~~~~~ii~P~~~~~~~~~~~sk~ei~~ya~~~g  179 (188)
T d1k92a1         147 NAELQIYKPWLDTDFIDELGGRHEMSEFMIACG  179 (188)
T ss_dssp             CTTCEEECGGGCHHHHHHSSSHHHHHHHHHHTT
T ss_pred             CCCCCEECHHHHHHHHCCCCCHHHHHHHHHHCC
T ss_conf             998874230465654413699999999999849


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Argininosuccinate synthetase, N-terminal domain
species: Escherichia coli [TaxId: 562]