HHSEARCH alignment of GI: 254781031 and SCOP domain: d2pg3a1

Alignment
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}
Probab=100.00  E-value=6.5e-43  Score=282.34  Aligned_cols=211  Identities=42%  Similarity=0.842  Sum_probs=162.5

Q ss_pred             CCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCC
Q ss_conf             94899980965699999999974983999997677887772799999999999998887520356158750110322444
Q gi|254781031|r    9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHS   88 (240)
Q Consensus         9 ~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (240)
                      ||+|+|||||+||+++||+++++|++|++|||||||+|..+.+++....++..         ...........+......
T Consensus         2 kK~Vvl~SGGlDS~v~a~~l~~~g~~v~~v~~~ygqr~~~E~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~   72 (230)
T d2pg3a1           2 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLG---------AAAHKVLDVGLLNELATS   72 (230)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSSSCHHHHHHHHHHHHHHT---------CSEEEEEECTHHHHTSHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHC---------CCCCCCCCHHHHHHCCCC
T ss_conf             86999848868899999999986996999999889754899999987677635---------440122103344312455


Q ss_pred             CCCCC----HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf             33222----01100012331011111112233377777743399365114544443455544302477777677530643
Q gi|254781031|r   89 SLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES  164 (240)
Q Consensus        89 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (240)
                      .....    .............+.|.++..++..+..++...++..+.+|...++...++++++.|.+.+++++....+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~l~~~~~~a~~~~~~~i~~G~~~~d~~~~~d~~~~f~~~~~~~~~~~~~~  152 (230)
T d2pg3a1          73 SLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIAR  152 (230)
T ss_dssp             HHHHTTCCCCC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSSCCGGGSHHHHHHHHHHHHHHHTS
T ss_pred             CCCCCCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             43344544320234412677526650068889999999887212121454333433356654076899999887751566


Q ss_pred             CEEEEEEECCCCHHHHHHHHHHHCCCHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             2167753138988999999998282000143255372162888655556688998687789999999973064
Q gi|254781031|r  165 HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK  237 (240)
Q Consensus       165 ~~~i~~P~~~~tK~eI~~~~~~~~~~~~~~~~~~~T~SC~~~~~~~~~~~~~hCG~C~~C~~R~~af~~~~~~  237 (240)
                      ++++++||+++||.||++++.+++   .+..++..|||||.|.+      ..|||+|.+|++||+||.+++..
T Consensus       153 ~~~i~~P~~~~tK~EI~~~~~~~~---~l~~~~~~T~SCy~~~~------~~~CG~C~~C~~R~~af~~~~~~  216 (230)
T d2pg3a1         153 DIRFETPLMWLNKAETWALADYYQ---QLDTVRYHTLTCYNGIK------GDGCGQCAACHLRANGLAQYQKD  216 (230)
T ss_dssp             CCEEECTTTTCCHHHHHHHHHHTT---CHHHHHHHCCCCTTSCC------TTTTSCSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEEEECCCHHHHHHHHHHCC---CCCCCHHCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             532686431588999999987605---65642302188889999------99798898699999999995799


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Queuosine biosynthesis protein QueC
species: Erwinia carotovora [TaxId: 554]