BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781031|ref|YP_003065444.1| exsB protein [Candidatus
Liberibacter asiaticus str. psy62]
(240 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781031|ref|YP_003065444.1| exsB protein [Candidatus Liberibacter asiaticus str. psy62]
gi|254040708|gb|ACT57504.1| exsB protein [Candidatus Liberibacter asiaticus str. psy62]
Length = 240
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/240 (100%), Positives = 240/240 (100%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI
Sbjct: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA
Sbjct: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET
Sbjct: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD
Sbjct: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
>gi|315122371|ref|YP_004062860.1| exsB protein [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495773|gb|ADR52372.1| exsB protein [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 243
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/239 (81%), Positives = 219/239 (91%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN+ +K SALLLFSGGQDSSTCLSWALD+FD+VETLSFDYGQRNKVELECRL +R+KI
Sbjct: 1 MNNNREKTSSALLLFSGGQDSSTCLSWALDKFDKVETLSFDYGQRNKVELECRLRLREKI 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
V+L PKWKDSLG DHILPLA LGDISHSSLTKN+ +KIQ+NNLPNTFVPGRNIIFLVFAA
Sbjct: 61 VQLTPKWKDSLGADHILPLATLGDISHSSLTKNIEIKIQENNLPNTFVPGRNIIFLVFAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GITNI+ G+CE DYSGYPDCR++TI+A+E +NLGMES+ T+HTPLM LKK+ET
Sbjct: 121 ALAYRRGITNIIAGMCEMDYSGYPDCRNETIKALEMTLNLGMESNFTIHTPLMHLKKHET 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
WKL QDIGGQ+LV+LILEESHTCYLG RDKRYEWGYGCNSCP+C LRQKGW+EFKEKYQ
Sbjct: 181 WKLVQDIGGQNLVDLILEESHTCYLGTRDKRYEWGYGCNSCPSCNLRQKGWVEFKEKYQ 239
>gi|170744632|ref|YP_001773287.1| exsB protein [Methylobacterium sp. 4-46]
gi|168198906|gb|ACA20853.1| exsB protein [Methylobacterium sp. 4-46]
Length = 233
Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 139/226 (61%), Positives = 183/226 (80%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TCL+WALDRF RVETL FDYGQR++VEL+CR +R + L P+W
Sbjct: 6 GALVLFSGGQDSTTCLAWALDRFARVETLGFDYGQRHRVELDCRDRLRAGLAALKPEWAR 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH LPL +LGDIS ++LT++ A+ + ++ LPNTFVPGRN++FL FAA LAYR G+
Sbjct: 66 RLGEDHTLPLGVLGDISETALTRDGAIALAESGLPNTFVPGRNLVFLTFAAALAYRRGLR 125
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+++ G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K ETW+LA+D+GG
Sbjct: 126 HLIGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAETWRLARDLGG 185
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ LV+LI+E+SHTCYLG+R R+ WG GC +CPAC LR+ G+ F+
Sbjct: 186 EALVDLIVEDSHTCYLGERGARHAWGRGCGTCPACRLREAGYARFR 231
>gi|220926504|ref|YP_002501806.1| exsB protein [Methylobacterium nodulans ORS 2060]
gi|219951111|gb|ACL61503.1| exsB protein [Methylobacterium nodulans ORS 2060]
Length = 233
Score = 315 bits (806), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 136/231 (58%), Positives = 181/231 (78%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
++ + AL+LFSGGQDS+TCL+WAL+RF RVETL FDYGQR++VEL+CR +R + L
Sbjct: 1 METSEGALVLFSGGQDSTTCLAWALERFGRVETLGFDYGQRHRVELDCRDRLRAGLAALD 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P W LG DH LPL +LG+IS ++LT++ A+ + + LPNTFVPGRN++FL FAA LAY
Sbjct: 61 PAWAARLGPDHTLPLGVLGEISETALTRDSAIALAETGLPNTFVPGRNLVFLTFAAALAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +IV G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K TW+LA
Sbjct: 121 RRGLRHIVGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAATWRLA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +GG+ LV+LI+E+SHTCY G+R +R+ WGYGC +CPAC LR G+ F+
Sbjct: 181 EALGGEALVDLIVEDSHTCYRGERGERHAWGYGCGTCPACELRAAGYARFR 231
>gi|258542251|ref|YP_003187684.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-01]
gi|256633329|dbj|BAH99304.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-01]
gi|256636388|dbj|BAI02357.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-03]
gi|256639441|dbj|BAI05403.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-07]
gi|256642497|dbj|BAI08452.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-22]
gi|256645552|dbj|BAI11500.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-26]
gi|256648605|dbj|BAI14546.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-32]
gi|256651658|dbj|BAI17592.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256654649|dbj|BAI20576.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-12]
Length = 246
Score = 314 bits (804), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 144/228 (63%), Positives = 181/228 (79%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL+LFSGGQDS+TCL+WAL+R+ RVETL FDYGQR+ VELECR +R+ +V P
Sbjct: 8 KQESALVLFSGGQDSATCLAWALERYGRVETLGFDYGQRHAVELECRASIRQGLVHQNPV 67
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W + LGEDH LPL LG++S +SLT++ + + +N LPNTFVPGRN+IFL FAA LA R
Sbjct: 68 WAERLGEDHTLPLHALGEVSETSLTRDAEISMAENGLPNTFVPGRNLIFLTFAAALAARR 127
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETDYSGYPDCR DTI+A++ A+NLGMES +HTPLMWL K ETW+LA++
Sbjct: 128 GIKHIVTGVCETDYSGYPDCRDDTIKALQVALNLGMESRYVLHTPLMWLDKAETWELAEE 187
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GGQ LV LI +ESHTCYLG+R + WG+GC +CPAC LR+ GW ++
Sbjct: 188 LGGQPLVELINKESHTCYLGERGTLHAWGHGCGTCPACQLRKSGWDDY 235
>gi|92117391|ref|YP_577120.1| ExsB [Nitrobacter hamburgensis X14]
gi|119367948|sp|Q1QM87|QUEC_NITHX RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91800285|gb|ABE62660.1| preQ(0) biosynthesis protein QueC [Nitrobacter hamburgensis X14]
Length = 238
Score = 310 bits (795), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 137/228 (60%), Positives = 175/228 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RF VETL FDYGQR+ +EL+CR + + L P W +
Sbjct: 9 TALVLFSGGQDSATCLAWALQRFAHVETLGFDYGQRHAIELDCRDALLAGMTSLRPDWAE 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGE H L + L +IS ++LT+NVA+++ + LPNTFVPGRN++FL FAA LAYR G+T
Sbjct: 69 KLGEGHTLAIPTLAEISDTALTRNVAIEMGEGGLPNTFVPGRNLVFLTFAAALAYRRGMT 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR DTI+A++TA+NLGM+ +HTPLMWL K TW LA ++GG
Sbjct: 129 DIVGGMCETDYSGYPDCRDDTIKALQTALNLGMDKQFELHTPLMWLDKAATWALAHELGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV+LI E SHTCYLG+R R++WGYGC CPAC LR KGW E+ +
Sbjct: 189 AGLVDLIREHSHTCYLGERGARHDWGYGCGECPACRLRAKGWCEYVAR 236
>gi|296447515|ref|ZP_06889438.1| exsB protein [Methylosinus trichosporium OB3b]
gi|296254982|gb|EFH02086.1| exsB protein [Methylosinus trichosporium OB3b]
Length = 238
Score = 310 bits (795), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 136/226 (60%), Positives = 176/226 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL++AL RF RVET+ FDYGQR++VEL+ R +R + L P W +
Sbjct: 11 SALVLFSGGQDSATCLAFALSRFARVETIGFDYGQRHRVELDQRAVLRAGMASLSPLWAE 70
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH + + LG +S ++LT+ A+ LPNTFVPGRNI+FL FAA LAYR GI
Sbjct: 71 RLGEDHTVSIEALGALSETALTREAAIAFDSTGLPNTFVPGRNILFLTFAAALAYRRGIG 130
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V G+CETDYSGYPDCR TIRA+ETA+ LGM+ +T+HTPLMW+ K TW+LA+++GG
Sbjct: 131 DLVGGMCETDYSGYPDCRDATIRAVETALRLGMDRPLTIHTPLMWIDKAATWRLARELGG 190
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ LV+LI+EESHTCYLG+R KR++WG+GC CPAC LR GW F+
Sbjct: 191 EALVSLIVEESHTCYLGERGKRFDWGHGCGECPACRLRAAGWENFR 236
>gi|170748385|ref|YP_001754645.1| exsB protein [Methylobacterium radiotolerans JCM 2831]
gi|170654907|gb|ACB23962.1| exsB protein [Methylobacterium radiotolerans JCM 2831]
Length = 239
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 136/225 (60%), Positives = 175/225 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WALDRFD VETL FDYGQR++VEL+ R +R L P W
Sbjct: 12 AALVLFSGGQDSATCLAWALDRFDHVETLGFDYGQRHRVELDRRAALRAGTTALDPAWAA 71
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH L L LG +S ++LT+ A+ + + LPNTFVPGRN++FL FAA LAYR G+
Sbjct: 72 RLGDDHTLALDALGQVSETALTREAAIGYEASGLPNTFVPGRNLVFLTFAAALAYRRGLR 131
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMWL K +TW+LA+ +GG
Sbjct: 132 HVVGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWLDKAQTWELAESLGG 191
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ LV+LI+EESHTCYLG+R +R+ WGYGC +CPAC LR G+ F
Sbjct: 192 RALVDLIVEESHTCYLGERGQRHPWGYGCGTCPACRLRADGYARF 236
>gi|329113418|ref|ZP_08242199.1| 7-cyano-7-deazaguanine synthase [Acetobacter pomorum DM001]
gi|326697243|gb|EGE48903.1| 7-cyano-7-deazaguanine synthase [Acetobacter pomorum DM001]
Length = 262
Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 142/228 (62%), Positives = 179/228 (78%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL+LFSGGQDS+TCL+WAL+R+ RVETL FDYGQR+ VELECR +R+ +V P
Sbjct: 24 KQESALVLFSGGQDSATCLAWALERYGRVETLGFDYGQRHAVELECRASIRQGLVNQNPT 83
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LG+DH LPL LG++S +SLT++ + + +N LPNTFVPGRN+IFL FAA LA R
Sbjct: 84 WASRLGDDHTLPLHALGEVSETSLTRDAEISMAENGLPNTFVPGRNLIFLTFAAALAARR 143
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETDYSGYPDCR DTI+A++ A+NLGMES +HTPLMWL K ETW+LA++
Sbjct: 144 GIKHIVTGVCETDYSGYPDCRDDTIKALQVALNLGMESRYVLHTPLMWLDKAETWELAEE 203
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG LV LI +ESHTCYLG+R + WG+GC +CPAC LR+ GW ++
Sbjct: 204 LGGHPLVELINKESHTCYLGERGILHAWGHGCGTCPACQLRKSGWDDY 251
>gi|158425299|ref|YP_001526591.1| ExsB protein [Azorhizobium caulinodans ORS 571]
gi|189038893|sp|A8IMX7|QUEC_AZOC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|158332188|dbj|BAF89673.1| ExsB protein [Azorhizobium caulinodans ORS 571]
Length = 241
Score = 308 bits (788), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 133/226 (58%), Positives = 180/226 (79%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+T L+WALDRF+RVETL FDYGQR+++EL+CR+ VR + L P W
Sbjct: 10 GALVLFSGGQDSTTTLAWALDRFERVETLGFDYGQRHRIELDCRVKVRAAMAALNPAWAA 69
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH L L LG +S ++LT++VA+++ + LPNTFVPGRNI+FL FAA LAYR G+
Sbjct: 70 KLGEDHTLALDALGAVSDTALTRDVAIEMTEGGLPNTFVPGRNIVFLTFAAALAYRRGLK 129
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETD+SGYPDCR DTI+A++ A+NLGM+ + TPLMW+ K ETW+LA+ +GG
Sbjct: 130 HIVGGMCETDFSGYPDCRDDTIKALQVALNLGMDRRFVLETPLMWIDKAETWRLAERLGG 189
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ LV+LI+E++HTCYLG+R R+ WG+GC +CPAC LR +G+ ++
Sbjct: 190 RALVDLIVEDTHTCYLGERGPRHPWGHGCGTCPACQLRAEGFARYE 235
>gi|192291524|ref|YP_001992129.1| exsB protein [Rhodopseudomonas palustris TIE-1]
gi|254764373|sp|B3QKK5|QUEC_RHOPT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|192285273|gb|ACF01654.1| exsB protein [Rhodopseudomonas palustris TIE-1]
Length = 237
Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 137/227 (60%), Positives = 177/227 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ +ELECR + + W
Sbjct: 9 TALVLFSGGQDSATCLAWALARFARVETIGFDYGQRHLIELECRARLLDGFRAISDDWAA 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG++H L + L +IS ++LT++VA+ + + LPNTFVPGRN+IFL FAA LAYR GIT
Sbjct: 69 KLGDNHTLTIPTLAEISDTALTRDVAIAMGADGLPNTFVPGRNLIFLNFAAALAYRRGIT 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR+DTI+A++TA++LGM +T+HTPLMW K TW+LAQD+GG
Sbjct: 129 DIVGGMCETDYSGYPDCRNDTIQALQTALSLGMARDITLHTPLMWRDKAATWQLAQDLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV+LI E+SHTCYLG+R R++WGYGC CPAC LR KGW+E+
Sbjct: 189 DALVDLIREDSHTCYLGERGARHDWGYGCGECPACRLRSKGWIEYAS 235
>gi|39935877|ref|NP_948153.1| ExsB family transcriptional regulator [Rhodopseudomonas palustris
CGA009]
gi|81562458|sp|Q6N608|QUEC_RHOPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|39649731|emb|CAE28252.1| possible exsB protein [Rhodopseudomonas palustris CGA009]
Length = 237
Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 137/227 (60%), Positives = 177/227 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ +ELECR + + W
Sbjct: 9 TALVLFSGGQDSATCLAWALARFARVETIGFDYGQRHLIELECRARLLDGFRAISDDWAA 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG++H L + L +IS ++LT++VA+ + + LPNTFVPGRN+IFL FAA LAYR GIT
Sbjct: 69 KLGDNHTLTIPTLAEISDTALTRDVAIAMGADGLPNTFVPGRNLIFLNFAAALAYRRGIT 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR+DTI+A++TA++LGM +T+HTPLMW K TW+LAQD+GG
Sbjct: 129 DIVGGMCETDYSGYPDCRNDTIQALQTALSLGMARDITLHTPLMWRDKAATWQLAQDLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV+LI E+SHTCYLG+R R++WGYGC CPAC LR KGW+E+
Sbjct: 189 DALVDLIREDSHTCYLGERGARHDWGYGCGECPACRLRAKGWIEYAS 235
>gi|27379606|ref|NP_771135.1| hypothetical protein blr4495 [Bradyrhizobium japonicum USDA 110]
gi|27352758|dbj|BAC49760.1| blr4495 [Bradyrhizobium japonicum USDA 110]
Length = 243
Score = 305 bits (780), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 139/234 (59%), Positives = 176/234 (75%), Gaps = 1/234 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+D + +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ VEL CR + +
Sbjct: 7 MSDAFS-SETALVLFSGGQDSTTCLAWALSRFARVETLGFDYGQRHAVELACRDRLFDGL 65
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L W D LGE H L + L IS ++LT++VA+ + + LPNTFVPGRN++FL FAA
Sbjct: 66 KGLRADWADKLGESHTLSIPTLAAISDTALTRDVAIAMGADGLPNTFVPGRNLVFLTFAA 125
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GIT+IV G+CETDYSGYPDCR +T+RA++ A++LGM +HTPLMW+ K T
Sbjct: 126 ALAYRRGITHIVGGMCETDYSGYPDCRDETVRAMQAALSLGMARKFELHTPLMWIDKAAT 185
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
WKLA D+GG+ LV+LI E+SHTCYLG+R ++EWGYGC CPAC LR KGW E+
Sbjct: 186 WKLAHDLGGEGLVDLIREQSHTCYLGERGAQHEWGYGCGECPACSLRAKGWNEY 239
>gi|114321844|ref|YP_743527.1| exsB protein [Alkalilimnicola ehrlichii MLHE-1]
gi|122310729|sp|Q0A550|QUEC_ALHEH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114228238|gb|ABI58037.1| preQ(0) biosynthesis protein QueC [Alkalilimnicola ehrlichii
MLHE-1]
Length = 238
Score = 305 bits (780), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 134/235 (57%), Positives = 179/235 (76%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M++ +A++LFSGGQDS+TCL+WAL R+ RV T++FDYGQR++VEL CR VR+ I
Sbjct: 1 MSETADTNQTAVVLFSGGQDSTTCLAWALARYHRVHTVAFDYGQRHRVELACRQRVREAI 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ W LGEDH+L L LG+IS +SLT+ A++I+D+ LP+TFVPGRN++FL +AA
Sbjct: 61 GQHFAGWGARLGEDHLLDLTSLGEISDTSLTRERAIEIRDSGLPDTFVPGRNLLFLTYAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA+RL +++ GVCETDYSGYPDCR DTI+A++ A+NLGM+SH +HTPLMW K +T
Sbjct: 121 ALAWRLQARHLITGVCETDYSGYPDCRDDTIKALQVALNLGMDSHFVLHTPLMWRDKAQT 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
W LA+ +GG DLV LI E +HTCYLG R +R++WGYGC CPAC LR +GW +
Sbjct: 181 WALAETLGGADLVELIAEHTHTCYLGDRTQRHDWGYGCGECPACRLRAQGWRRHR 235
>gi|91977221|ref|YP_569880.1| ExsB [Rhodopseudomonas palustris BisB5]
gi|123749011|sp|Q136L0|QUEC_RHOPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91683677|gb|ABE39979.1| ExsB [Rhodopseudomonas palustris BisB5]
Length = 238
Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 172/230 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RF RVE + FDYGQR+ VEL+CR + + P+W
Sbjct: 9 TALVLFSGGQDSATCLAWALSRFARVEMIGFDYGQRHAVELDCRAKLLDGFRAISPEWAA 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+ H L + L IS ++LT++V + + + LPNTFVPGRN+IFL FAA LAYR GI
Sbjct: 69 KLGDSHTLAIPTLSAISDTALTRDVEIAMGADGLPNTFVPGRNLIFLTFAAALAYRRGIA 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR DTIRA++ AI+LGM V +HTPLMW K TW+LAQD+GG
Sbjct: 129 DIVGGMCETDYSGYPDCRDDTIRALQNAISLGMARDVKLHTPLMWRDKAATWQLAQDLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LV+LI+E SHTCYLG+R R++WGYGC CPAC LR KGW E+ K +
Sbjct: 189 SALVDLIVEHSHTCYLGERGARHDWGYGCGECPACALRAKGWREYSAKAR 238
>gi|148255468|ref|YP_001240053.1| hypothetical protein BBta_4081 [Bradyrhizobium sp. BTAi1]
gi|146407641|gb|ABQ36147.1| preQ(0) biosynthesis protein QueC [Bradyrhizobium sp. BTAi1]
Length = 241
Score = 304 bits (779), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 179/225 (79%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WALDRF R+ET+ FDYGQR+ +EL+CR + + +L P+W
Sbjct: 10 TALVLFSGGQDSTTCLAWALDRFARIETIGFDYGQRHAIELDCRARLLDGLAQLRPEWAG 69
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+ H L + L IS ++LT++VA+++ + LPNTFVPGRN++FL FAA LAYR GI+
Sbjct: 70 KLGDGHTLEIPTLSAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAAALAYRRGIS 129
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR +TI+A++ A++LGM +HTPLMWL K TW+LA D+GG
Sbjct: 130 HIVGGMCETDYSGYPDCRDETIKALQGALSLGMARPFELHTPLMWLSKAATWQLAYDLGG 189
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+DLV+LI ++SHTCYLG+R R++WGYGC +CPAC LR +GW E+
Sbjct: 190 RDLVDLIRDQSHTCYLGERGARHDWGYGCGACPACDLRARGWHEY 234
>gi|110816215|sp|Q89LP8|QUEC_BRAJA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 237
Score = 304 bits (779), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 139/234 (59%), Positives = 176/234 (75%), Gaps = 1/234 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+D + +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ VEL CR + +
Sbjct: 1 MSDAFS-SETALVLFSGGQDSTTCLAWALSRFARVETLGFDYGQRHAVELACRDRLFDGL 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L W D LGE H L + L IS ++LT++VA+ + + LPNTFVPGRN++FL FAA
Sbjct: 60 KGLRADWADKLGESHTLSIPTLAAISDTALTRDVAIAMGADGLPNTFVPGRNLVFLTFAA 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GIT+IV G+CETDYSGYPDCR +T+RA++ A++LGM +HTPLMW+ K T
Sbjct: 120 ALAYRRGITHIVGGMCETDYSGYPDCRDETVRAMQAALSLGMARKFELHTPLMWIDKAAT 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
WKLA D+GG+ LV+LI E+SHTCYLG+R ++EWGYGC CPAC LR KGW E+
Sbjct: 180 WKLAHDLGGEGLVDLIREQSHTCYLGERGAQHEWGYGCGECPACSLRAKGWNEY 233
>gi|189039058|sp|A5EJ03|QUEC_BRASB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 239
Score = 304 bits (779), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 179/225 (79%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WALDRF R+ET+ FDYGQR+ +EL+CR + + +L P+W
Sbjct: 8 TALVLFSGGQDSTTCLAWALDRFARIETIGFDYGQRHAIELDCRARLLDGLAQLRPEWAG 67
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+ H L + L IS ++LT++VA+++ + LPNTFVPGRN++FL FAA LAYR GI+
Sbjct: 68 KLGDGHTLEIPTLSAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAAALAYRRGIS 127
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR +TI+A++ A++LGM +HTPLMWL K TW+LA D+GG
Sbjct: 128 HIVGGMCETDYSGYPDCRDETIKALQGALSLGMARPFELHTPLMWLSKAATWQLAYDLGG 187
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+DLV+LI ++SHTCYLG+R R++WGYGC +CPAC LR +GW E+
Sbjct: 188 RDLVDLIRDQSHTCYLGERGARHDWGYGCGACPACDLRARGWHEY 232
>gi|85715521|ref|ZP_01046502.1| ExsB [Nitrobacter sp. Nb-311A]
gi|85697716|gb|EAQ35592.1| ExsB [Nitrobacter sp. Nb-311A]
Length = 250
Score = 304 bits (778), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 136/225 (60%), Positives = 171/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ +EL CR + + L P W
Sbjct: 21 TALVLFSGGQDSATCLAWALQRFARVETLGFDYGQRHAIELNCRDKLLAGMASLRPDWAK 80
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGE H L + L +IS ++LT+NVA+++ + LPNTFVPGRN++FL FAA LAYR G+T
Sbjct: 81 KLGETHTLAVPTLAEISDTALTRNVAIEMGEGGLPNTFVPGRNLVFLTFAAALAYRRGVT 140
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR +TIRA+ TA+NLGM + +HTPLM L K TW LA ++GG
Sbjct: 141 DIVGGMCETDYSGYPDCRDETIRALRTALNLGMATRFELHTPLMRLDKGATWSLAHELGG 200
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV+LI E SHTCYLG+R R+ WGYGC +CPAC LR KGW ++
Sbjct: 201 AGLVDLIREHSHTCYLGERGARHAWGYGCATCPACELRAKGWRKY 245
>gi|154245818|ref|YP_001416776.1| exsB protein [Xanthobacter autotrophicus Py2]
gi|154159903|gb|ABS67119.1| exsB protein [Xanthobacter autotrophicus Py2]
Length = 249
Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 131/226 (57%), Positives = 174/226 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TCL++AL+RF RVETL F YGQR+ VELE R +R L P W
Sbjct: 11 GALVLFSGGQDSATCLAYALERFGRVETLGFHYGQRHAVELERRPVLRDAFATLKPAWAS 70
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG DH+L + +LG IS ++LT++VA+++ + LPNTFVPGRN++FL FAA LAYR G+
Sbjct: 71 RLGADHMLDMPVLGQISETALTRDVAVEMAEGGLPNTFVPGRNLVFLTFAAALAYRRGLR 130
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+ G+CETD+SGYPDCR DT++A++ A+NLGME +HTPLMW+ K ETW LA+ +GG
Sbjct: 131 HIIGGMCETDFSGYPDCRDDTVKAMQVALNLGMEKRFVLHTPLMWIDKAETWGLAERLGG 190
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
LV+LI+E++HTCYLG+R KR+ WGYGC CPAC LR G+ ++
Sbjct: 191 TALVDLIVEDAHTCYLGERGKRHAWGYGCGECPACKLRADGFARYR 236
>gi|323136676|ref|ZP_08071757.1| exsB protein [Methylocystis sp. ATCC 49242]
gi|322397993|gb|EFY00514.1| exsB protein [Methylocystis sp. ATCC 49242]
Length = 240
Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 134/225 (59%), Positives = 171/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR++VELE R +R+ I + P W++
Sbjct: 12 SALVLFSGGQDSTTCLAWALTRFSRVETLGFDYGQRHRVELERRAALREGIARISPAWRE 71
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH + + LG IS ++LT+ + + + LPNTFVPGRN++FL FAA LAYR I
Sbjct: 72 RLGEDHTISIEALGAISDTALTREAEIAMNVDGLPNTFVPGRNLLFLTFAAALAYRRSIL 131
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V G+CETDYSGYPDCR TIRA+ A++LGM+ +HTPLMW+ K TW+LAQ++GG
Sbjct: 132 DLVGGMCETDYSGYPDCRDGTIRAMAQALSLGMDRAFVIHTPLMWIDKAATWRLAQELGG 191
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV LI+EESHTCYLG+R + ++WGYGC CPAC LR GW F
Sbjct: 192 DALVQLIVEESHTCYLGERGRPFDWGYGCGECPACQLRAAGWERF 236
>gi|75675645|ref|YP_318066.1| ExsB [Nitrobacter winogradskyi Nb-255]
gi|110816237|sp|Q3SSM7|QUEC_NITWN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|74420515|gb|ABA04714.1| preQ(0) biosynthesis protein QueC [Nitrobacter winogradskyi Nb-255]
Length = 238
Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 136/225 (60%), Positives = 170/225 (75%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ +EL+CR + + L P W
Sbjct: 9 TALVLFSGGQDSATCLAWALQRFARVETLGFDYGQRHAIELDCRDSLLAGMASLRPDWAK 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGE H L + L +IS ++LT+NVA+++ ++ LPNTFVPGRN++FL FAA LAYR G+T
Sbjct: 69 KLGETHTLAIPTLAEISDTALTRNVAIEVSESGLPNTFVPGRNLVFLTFAAALAYRRGVT 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR +TIRA+ A+NLGM +HTPLM L K TW LA ++GG
Sbjct: 129 DIVGGMCETDYSGYPDCRDETIRALRIALNLGMVRQFELHTPLMRLDKGATWSLAHELGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV+LI E SHTCYLG+R R+ WGYGC CPAC LR KGW E+
Sbjct: 189 TGLVDLIREHSHTCYLGERGARHAWGYGCGECPACGLRAKGWREY 233
>gi|316934031|ref|YP_004109013.1| ExsB protein [Rhodopseudomonas palustris DX-1]
gi|315601745|gb|ADU44280.1| exsB protein [Rhodopseudomonas palustris DX-1]
Length = 237
Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 135/228 (59%), Positives = 176/228 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WALDRF RVET+ FDYGQR+ +EL CR + + + W
Sbjct: 9 TALVLFSGGQDSATCLAWALDRFARVETIGFDYGQRHLIELACRSRLLDGVRGINADWAA 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+ H L + L +IS ++LT++VA+ + + LPNTFVPGRN+IFL FAA LAYR GIT
Sbjct: 69 KLGDSHTLTIPTLAEISDTALTRDVAIAMGADGLPNTFVPGRNLIFLTFAAALAYRRGIT 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR+DTI+A+++A++LGM +T+HTPLMW K TW+LA+D+GG
Sbjct: 129 DIVGGMCETDYSGYPDCRNDTIQALQSALSLGMARDLTLHTPLMWRDKAATWQLAKDLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV+LI E+SHTCYLG+R R+ WGYGC CPAC LR KGW E+ +
Sbjct: 189 DALVDLIREDSHTCYLGERGARHAWGYGCGECPACRLRAKGWNEYAAR 236
>gi|299532639|ref|ZP_07046027.1| exsB protein [Comamonas testosteroni S44]
gi|298719274|gb|EFI60243.1| exsB protein [Comamonas testosteroni S44]
Length = 253
Score = 301 bits (772), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 136/225 (60%), Positives = 170/225 (75%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+ AL F+RVETL FDYGQR+ VE++ R VR+++ E P W
Sbjct: 24 ALVLFSGGQDSTTCLAQALAMFERVETLGFDYGQRHSVEMQVRAGVREQLAERFPLWAPR 83
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LGEDH+L L +L I SSLT++VA +Q + LPNTFVPGRN++FL A LAYR G+T
Sbjct: 84 LGEDHVLSLDVLKQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRGLTV 143
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
IV GVCETDYSGYPDCR DT++A + A+NLG+E + + TPLMWL K +TW+LAQD+GG
Sbjct: 144 IVTGVCETDYSGYPDCRDDTMKAQQLALNLGLERRLRIDTPLMWLDKAQTWQLAQDLGGS 203
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+LV LI E+HTCY G RD +EWGYGC SCPAC LR GW ++
Sbjct: 204 ELVELIRTETHTCYQGTRDALHEWGYGCGSCPACELRASGWHNWR 248
>gi|56551919|ref|YP_162758.1| exsB protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|81355074|sp|Q5NNR3|QUEC_ZYMMO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56543493|gb|AAV89647.1| exsB protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 254
Score = 301 bits (771), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 179/225 (79%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L+SGGQDS+TCL+WAL+ FDRVET+ FDYGQR+KVELECR +++K+++ P W L
Sbjct: 27 LVLYSGGQDSATCLAWALEHFDRVETIGFDYGQRHKVELECRENLKQKLIQNFPDWAAHL 86
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
GEDH+L LA+L +S +LT+ + ++ +PN+FVPGRN++F FAAT+AYR G+ +I
Sbjct: 87 GEDHMLDLAVLHQVSDCALTRETEIAFGEDGIPNSFVPGRNLLFFTFAATIAYRRGLRHI 146
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G+CETDYSGYPDCR DTI+A++ AINLG+E + +HTPLMWL K TW++A+++GG++
Sbjct: 147 VGGMCETDYSGYPDCRDDTIKALQVAINLGLERRLVLHTPLMWLDKASTWQMAEEVGGKE 206
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV +I +ESH+CYLG+R+ ++WGYGC CPAC LR GW +++
Sbjct: 207 LVEIIRQESHSCYLGEREILHDWGYGCGHCPACELRAAGWESYQK 251
>gi|307294877|ref|ZP_07574719.1| exsB protein [Sphingobium chlorophenolicum L-1]
gi|306879351|gb|EFN10569.1| exsB protein [Sphingobium chlorophenolicum L-1]
Length = 237
Score = 301 bits (770), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 132/227 (58%), Positives = 175/227 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL++FSGGQDS+TCL+WAL+RFDRVET+ F YGQR+++EL R +R+ I + P W
Sbjct: 7 SALVVFSGGQDSATCLAWALNRFDRVETIGFRYGQRHEIELAVRNPLREGIADAFPNWAP 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG D I+ LA+LG++S S+LT ++ + ++D+ LP TFVPGRN+IFL FAA AY+ G+
Sbjct: 67 RLGPDRIIDLAVLGEVSESALTSDIDIGMRDDGLPTTFVPGRNLIFLTFAAITAYQRGLK 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V GVCETDYSGYPDCR DTI+A++ A+NLGM SH+ + TPLMW+ K TW+LA ++GG
Sbjct: 127 HVVTGVCETDYSGYPDCRDDTIKALQAALNLGMGSHLVLDTPLMWIDKAATWRLAAELGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV++I E SH+CYLG R R++WGYGC SCPAC LR GW F E
Sbjct: 187 SALVDIIREHSHSCYLGDRAHRHDWGYGCGSCPACDLRANGWRIFTE 233
>gi|241761765|ref|ZP_04759851.1| exsB protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260752525|ref|YP_003225418.1| exsB protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|241373679|gb|EER63239.1| exsB protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258551888|gb|ACV74834.1| exsB protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 254
Score = 300 bits (769), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 179/225 (79%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L+SGGQDS+TCL+WAL+ FDRVET+ FDYGQR+K+ELECR +++K+++ P W L
Sbjct: 27 LVLYSGGQDSATCLAWALEHFDRVETIGFDYGQRHKIELECRENLKQKLIQNFPDWAAHL 86
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
GEDH+L LA+L +S +LT+ + ++ +PN+FVPGRN++F FAAT+AYR G+ +I
Sbjct: 87 GEDHMLDLAVLHQVSDCALTRETEIAFGEDGIPNSFVPGRNLLFFTFAATIAYRRGLRHI 146
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G+CETDYSGYPDCR DTI+A++ AINLG+E + +HTPLMWL K TW++A+++GG++
Sbjct: 147 VGGMCETDYSGYPDCRDDTIKALQVAINLGLERRLVLHTPLMWLDKASTWQMAEEVGGKE 206
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV +I +ESH+CYLG+R+ ++WGYGC CPAC LR GW +++
Sbjct: 207 LVEIIRQESHSCYLGEREILHDWGYGCGHCPACELRAAGWESYQK 251
>gi|90424248|ref|YP_532618.1| ExsB [Rhodopseudomonas palustris BisB18]
gi|110816254|sp|Q213Y7|QUEC_RHOPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|90106262|gb|ABD88299.1| ExsB [Rhodopseudomonas palustris BisB18]
Length = 240
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 136/236 (57%), Positives = 176/236 (74%), Gaps = 1/236 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ I++ +AL+LFSGGQDS+TCL+W L RF RVETL FDYGQR+ VEL+CR + +
Sbjct: 1 MSQILQH-DAALVLFSGGQDSATCLAWTLSRFARVETLGFDYGQRHAVELDCRDRLIDGL 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ P W + LG+ H L + L IS ++LT++VA+ + + LPNTFVPGRN++FL FAA
Sbjct: 60 KQIHPDWANKLGDAHTLSIPTLATISDTALTRDVAIAMGADGLPNTFVPGRNLLFLTFAA 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GI +V G+CETDYSGYPDCR T++A+ TA+NLGM + +HTPLMW K T
Sbjct: 120 ALAYRRGIGGLVGGMCETDYSGYPDCRDATLKALTTALNLGMATDFELHTPLMWRDKAAT 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
W LAQD+GG LV+LI E SHTCYLG+R R++WGYGC CPAC LR KGW E++E
Sbjct: 180 WALAQDLGGDALVDLIREHSHTCYLGERGARHDWGYGCGECPACQLRAKGWREYRE 235
>gi|264680395|ref|YP_003280305.1| exsB protein [Comamonas testosteroni CNB-2]
gi|262210911|gb|ACY35009.1| exsB protein [Comamonas testosteroni CNB-2]
Length = 253
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 135/225 (60%), Positives = 170/225 (75%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+ AL F+RVETL FDYGQR+ VE++ R VR+++ E P W
Sbjct: 24 ALVLFSGGQDSTTCLAQALAMFERVETLGFDYGQRHSVEMQVRAGVREQLAERFPLWAPR 83
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LGEDH+L L +L I SSLT++VA +Q + LPNTFVPGRN++FL A LAYR G+T
Sbjct: 84 LGEDHVLSLDVLKQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRGLTV 143
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
IV GVCETDYSGYPDCR DT++A + A+NLG+E + + TPLMWL K +TW+LAQD+GG
Sbjct: 144 IVTGVCETDYSGYPDCRDDTMKAQQLALNLGLERRLRIDTPLMWLDKAQTWQLAQDLGGS 203
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+LV LI E+HTCY G RD +EWGYGC +CPAC LR GW ++
Sbjct: 204 ELVELIRTETHTCYQGTRDALHEWGYGCGNCPACELRASGWHNWR 248
>gi|115524890|ref|YP_781801.1| ExsB family transcriptional regulator [Rhodopseudomonas palustris
BisA53]
gi|122295935|sp|Q07ML3|QUEC_RHOP5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|115518837|gb|ABJ06821.1| exsB protein [Rhodopseudomonas palustris BisA53]
Length = 242
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 136/228 (59%), Positives = 170/228 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WALDRF RVET+ FDYGQR+ VEL+ R + + L P+W
Sbjct: 9 AALVLFSGGQDSATCLAWALDRFARVETIGFDYGQRHLVELDSRAKLLDGLKTLKPEWVA 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGE H L + L +S ++LT++VA+ + + LPNTFVPGRN+IFL FAA LAYR GI
Sbjct: 69 KLGETHTLAIPTLAQVSDTALTRDVAIAMGADGLPNTFVPGRNLIFLTFAAALAYRRGIG 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I+ G+CETDYSGYPDCR TI+A+ AINLGM + +HTPLMWL K TW LAQ +GG
Sbjct: 129 AIIGGMCETDYSGYPDCRDATIKALGEAINLGMATQFELHTPLMWLDKAATWGLAQTLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LV+LI E SHTCYLG+R R++WG+GC CPAC LR KGW EF +
Sbjct: 189 ERLVDLIREHSHTCYLGERGARHDWGFGCGECPACQLRAKGWREFSAQ 236
>gi|221064992|ref|ZP_03541097.1| exsB protein [Comamonas testosteroni KF-1]
gi|220710015|gb|EED65383.1| exsB protein [Comamonas testosteroni KF-1]
Length = 253
Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 134/226 (59%), Positives = 170/226 (75%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TCL+ AL F+RVETL FDYGQR+ VE++ R VR+++ + P+W
Sbjct: 23 GALVLFSGGQDSTTCLAQALAMFERVETLGFDYGQRHSVEMQVRAGVREQLAQRFPQWAP 82
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH+L L +L I SSLT++VA +Q + LPNTFVPGRN++FL A LAYR G+T
Sbjct: 83 RLGEDHVLSLDVLKQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRGLT 142
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV GVCETDYSGYPDCR DT++A + A+NLG+E + + TPLMWL K +TW+LA D+GG
Sbjct: 143 VIVTGVCETDYSGYPDCRDDTMKAQQLALNLGLERRLRIDTPLMWLDKAQTWQLAHDLGG 202
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
DLV LI E+HTCY G RD ++WGYGC SCPAC LR GW ++
Sbjct: 203 SDLVELIRTETHTCYQGTRDVLHDWGYGCGSCPACELRASGWHNWR 248
>gi|217976466|ref|YP_002360613.1| exsB protein [Methylocella silvestris BL2]
gi|217501842|gb|ACK49251.1| exsB protein [Methylocella silvestris BL2]
Length = 236
Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 174/226 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL LFSGGQDS+TCL++ALDR+D VET+ FDY QR+++EL+ R +R ++ P WKD
Sbjct: 9 GALTLFSGGQDSTTCLAYALDRYDHVETIGFDYDQRHRIELDQRGKIRDALLRDFPAWKD 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH++ + L +I+ +++T +V + N LPNTFVPGRN++FL FA LAYR G+T
Sbjct: 69 KLGEDHLVRIGALAEIATTAMTHDVEIAFDANGLPNTFVPGRNLLFLTFAGALAYRRGLT 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I+ G+CETD+SGYPDCR DT++A++ A+NLGM++ V TPLMWL K TW+LA+ +GG
Sbjct: 129 QIIGGMCETDFSGYPDCRDDTVKAMQIALNLGMDTRFNVETPLMWLDKAATWRLAERLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ L+ +ILEE+HTCYLG+R KR+ WGYGC CPAC LR KGW E++
Sbjct: 189 KALIAIILEETHTCYLGERGKRHNWGYGCGECPACQLRAKGWREYR 234
>gi|146340791|ref|YP_001205839.1| putative ExsB [Bradyrhizobium sp. ORS278]
gi|146193597|emb|CAL77614.1| conserved hypothetical protein; putative ExsB [Bradyrhizobium sp.
ORS278]
Length = 248
Score = 298 bits (762), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 173/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WALDRF RVET+ F YGQR+ +EL+CR +R I +L W D
Sbjct: 19 TALVLFSGGQDSTTCLAWALDRFARVETIGFSYGQRHGIELDCRARLRDGIAQLRADWAD 78
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG +H L + L IS ++LT++VA+++ + LPNTFVPGRN++FL FAA LAYR GI
Sbjct: 79 KLGCEHTLDIPTLAAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAAALAYRRGIR 138
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR +TI+A++ A++LGM +HTPLMWL K TW+LA D+GG
Sbjct: 139 HIVGGMCETDYSGYPDCRDETIKALQVALSLGMARPFELHTPLMWLTKAATWQLAHDLGG 198
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ LV+LI +ESHTCYLG+R R++WG+GC CPAC LR GW +
Sbjct: 199 RGLVDLIRDESHTCYLGERGARHDWGHGCGRCPACELRAHGWRAY 243
>gi|189039059|sp|A4YUN8|QUEC_BRASO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 236
Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 132/229 (57%), Positives = 175/229 (76%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ +AL+LFSGGQDS+TCL+WALDRF RVET+ F YGQR+ +EL+CR +R I +L
Sbjct: 3 EQDATALVLFSGGQDSTTCLAWALDRFARVETIGFSYGQRHGIELDCRARLRDGIAQLRA 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
W D LG +H L + L IS ++LT++VA+++ + LPNTFVPGRN++FL FAA LAYR
Sbjct: 63 DWADKLGCEHTLDIPTLAAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAAALAYR 122
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +IV G+CETDYSGYPDCR +TI+A++ A++LGM +HTPLMWL K TW+LA
Sbjct: 123 RGIRHIVGGMCETDYSGYPDCRDETIKALQVALSLGMARPFELHTPLMWLTKAATWQLAH 182
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D+GG+ LV+LI +ESHTCYLG+R R++WG+GC CPAC LR GW +
Sbjct: 183 DLGGRGLVDLIRDESHTCYLGERGARHDWGHGCGRCPACELRAHGWRAY 231
>gi|48428738|gb|AAT42387.1| putative PP-loop superfamily ATPase [Collimonas fungivorans Ter331]
Length = 236
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 178/227 (78%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++LFSGGQDS+TCL+WAL R++RVET+ FDYGQR+ VEL R + +KI P+W
Sbjct: 6 GAIVLFSGGQDSTTCLAWALSRYERVETIGFDYGQRHAVELTVRPVLLQKIRAQFPQWAG 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH++ L+++ IS +++T++V + +Q+N LPNTFVPGRN++F+ AAT+AYR G+
Sbjct: 66 KLGEDHLIDLSLISKISSTAMTEDVEIVMQENGLPNTFVPGRNLLFMTVAATVAYRRGLN 125
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM + + + TPLMW+ K ETWKLAQD+GG
Sbjct: 126 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQIKLETPLMWIDKSETWKLAQDLGG 185
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV+LI ++HTCYLG+R ++WGYGC +CPAC LR +G+ +F+
Sbjct: 186 DALVDLIRADTHTCYLGQRGALHDWGYGCGTCPACALRARGYQQFRS 232
>gi|299133865|ref|ZP_07027059.1| exsB protein [Afipia sp. 1NLS2]
gi|298591701|gb|EFI51902.1| exsB protein [Afipia sp. 1NLS2]
Length = 235
Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 176/233 (75%), Gaps = 2/233 (0%)
Query: 5 IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K P +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ +ELECR + +
Sbjct: 1 MDKTPENAALVLFSGGQDSATCLAWALSRFARVETLGFDYGQRHAIELECRATLIEGFKR 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L P+WK LGE H+L + L +IS ++LT+++A+++++ LPNTFVPGRN++FL FAA L
Sbjct: 61 LKPEWKTKLGEAHMLAIPTLAEISDTALTRDIAIEMEEGGLPNTFVPGRNLLFLTFAAAL 120
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
YR GI +IV G+CETDYSGYPDCR +TI+++ A+N GM +HTPLMW K +TW
Sbjct: 121 GYRRGIRHIVGGMCETDYSGYPDCRDETIKSLNVALNQGMGRDFELHTPLMWRDKAQTWA 180
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
LA ++GG+ LV+LI++ SHTCYLG+R ++WGYGC CPAC LR GW ++K
Sbjct: 181 LAHELGGEALVDLIVQHSHTCYLGERGALHDWGYGCGECPACRLRAAGWEKYK 233
>gi|296536223|ref|ZP_06898341.1| transcription regulator ExsB [Roseomonas cervicalis ATCC 49957]
gi|296263445|gb|EFH09952.1| transcription regulator ExsB [Roseomonas cervicalis ATCC 49957]
Length = 248
Score = 295 bits (756), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 132/228 (57%), Positives = 175/228 (76%), Gaps = 3/228 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+++ELECR R + E W+
Sbjct: 23 GALVLFSGGQDSATCLAWALTRFARVETLGFDYGQRHRIELECRAGFRDGLPE---DWQA 79
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG DH L L LG++S ++LT+ + +Q + LPNTFVPGRN++FL FAA LAYR G+
Sbjct: 80 RLGPDHTLRLDALGELSDTALTRETEIAMQADGLPNTFVPGRNLLFLTFAAALAYRRGLR 139
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETD+SGYPDCR DT++A++ A+NLGME +HTPLMWL K ETW+LA+ +GG
Sbjct: 140 HIVGGMCETDFSGYPDCRDDTLKALQVALNLGMERRFVLHTPLMWLDKGETWELAERLGG 199
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
Q LV I+E++HTCY G+R +R+ WG+GC +CPAC LR +GW E++ +
Sbjct: 200 QKLVCDIVEKTHTCYRGERGERHPWGHGCAACPACELRARGWAEYRSR 247
>gi|118574282|sp|Q146Z6|QUEC_BURXL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 243
Score = 294 bits (753), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 174/222 (78%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R +V P W D
Sbjct: 9 SALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVVRAFPAWAD 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGEDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQ 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA ++GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFLLETPLMWLDKADTWRLAHELGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+LV L+ E+HTCYLG+R + + WG+GC CPAC LR++G+
Sbjct: 189 AELVELVRVETHTCYLGERAELHAWGFGCGECPACRLRKRGY 230
>gi|312797587|ref|YP_004030509.1| Queuosine biosynthesis protein QueC [Burkholderia rhizoxinica HKI
454]
gi|312169362|emb|CBW76365.1| Queuosine biosynthesis protein QueC [Burkholderia rhizoxinica HKI
454]
Length = 244
Score = 294 bits (753), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 176/226 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL R++RVETL FDYGQR++VELECR R ++ P+WK
Sbjct: 9 GALVLFSGGQDSATCVAWALSRYERVETLGFDYGQRHRVELECRDGFRDALIRAFPQWKQ 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+LG+DH + L++LG IS +++T+ + ++ Q N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 TLGDDHRVDLSVLGAISDTAMTREIQIETQANGLPNTFVPGRNLMFMTIAAAVAYRRGLG 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM+ + TPLMWL K +TW+LA IGG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDQRFVLETPLMWLDKADTWRLAASIGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ LV LI E+HTCY+G+R + ++WG+GC +CPAC LR +G+ F+
Sbjct: 189 EALVELIRVETHTCYVGERAELHDWGFGCGACPACRLRARGYHAFR 234
>gi|86749826|ref|YP_486322.1| ExsB [Rhodopseudomonas palustris HaA2]
gi|110816203|sp|Q2IWJ9|QUEC1_RHOP2 RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|86572854|gb|ABD07411.1| ExsB [Rhodopseudomonas palustris HaA2]
Length = 238
Score = 294 bits (752), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 131/228 (57%), Positives = 169/228 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RF RVE + FDYGQR+ VEL+CR + + +W
Sbjct: 9 TALVLFSGGQDSATCLAWALSRFARVEMIGFDYGQRHAVELDCRAKLLDGFRAISSEWAS 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+ H L + L IS ++LT++V + + + LPNTFVPGRN+IFL FAA LAYR GI
Sbjct: 69 KLGDSHTLAIPTLSAISDTALTRDVEIAMGADGLPNTFVPGRNLIFLTFAAALAYRRGIA 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR DTI+A++ AI+LGM +HTPLMW K TW+LA D+GG
Sbjct: 129 DIVGGMCETDYSGYPDCRDDTIKALQGAISLGMARDFELHTPLMWRDKAATWQLAHDLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV+LI E SHTCYLG+R +R++WGYGC CPAC LR +GW E++ +
Sbjct: 189 AALVDLIREHSHTCYLGERGERHDWGYGCGECPACALRARGWREYRTR 236
>gi|186474814|ref|YP_001856284.1| exsB protein [Burkholderia phymatum STM815]
gi|254764315|sp|B2JJV1|QUEC_BURP8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|184191273|gb|ACC69238.1| exsB protein [Burkholderia phymatum STM815]
Length = 243
Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 175/230 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WALDR++ VETL FDYGQR++VELECR R + P+W +
Sbjct: 9 SALVLFSGGQDSATCLAWALDRYETVETLGFDYGQRHRVELECREGFRSAVARTFPEWGE 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + + N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGSISETAMTREIEIHAASNGLPNTFVPGRNLMFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM+S + TPLMW+ K +TW+LA ++GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFVLETPLMWIDKADTWRLAHELGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+LV LI E+HTCYLG+R + + WG+GC CPAC LR++G+ + Q
Sbjct: 189 DELVELIRVETHTCYLGERAELHAWGFGCGECPACRLRKRGYEAYLSGEQ 238
>gi|295675133|ref|YP_003603657.1| exsB protein [Burkholderia sp. CCGE1002]
gi|295434976|gb|ADG14146.1| exsB protein [Burkholderia sp. CCGE1002]
Length = 270
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 174/225 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WALDR+D VET+ FDYGQR++VELECR R+ +V P W D
Sbjct: 36 SALVLFSGGQDSATCLAWALDRYDTVETIGFDYGQRHRVELECREGFRQAVVRAFPAWAD 95
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH + L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 96 RLGDDHTIDLSLLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQ 155
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA ++GG
Sbjct: 156 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFALETPLMWLDKADTWRLAHELGG 215
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV L+ E+HTCYLG+R + + WG+GC CPAC LR++G+ +
Sbjct: 216 DALVELVRVETHTCYLGERAELHSWGFGCGECPACRLRKRGYEAY 260
>gi|239814070|ref|YP_002942980.1| exsB protein [Variovorax paradoxus S110]
gi|239800647|gb|ACS17714.1| exsB protein [Variovorax paradoxus S110]
Length = 237
Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 128/228 (56%), Positives = 170/228 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+ AL ++ RVETL FDYGQR++VEL+ R + ++ E P W
Sbjct: 6 TALVLFSGGQDSTTCLAEALSKYQRVETLGFDYGQRHRVELDVRGTILARMRERFPDWAP 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH+L LA L + SSLT+ VA ++Q + LPNTFVPGRN++FL A LAYR G+
Sbjct: 66 RLGEDHVLTLAALAQLGGSSLTEEVAFEMQADGLPNTFVPGRNLLFLTLAGALAYRRGLQ 125
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV GVCETD+SGYPDCR DT++A++ A++LG+E + + TPLMW+ K ETW++A +GG
Sbjct: 126 VIVTGVCETDFSGYPDCRDDTVKAMQLALSLGLERRLVIETPLMWIDKAETWQMAHRLGG 185
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LV LI+EE+HTCYLG R+ R WGYGC CPAC LR+ GW + +
Sbjct: 186 EPLVELIVEETHTCYLGDREHRQAWGYGCGECPACELRKNGWERYASR 233
>gi|295688230|ref|YP_003591923.1| ExsB protein [Caulobacter segnis ATCC 21756]
gi|295430133|gb|ADG09305.1| exsB protein [Caulobacter segnis ATCC 21756]
Length = 243
Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 126/229 (55%), Positives = 176/229 (76%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ +AL+LFSGGQDSS CL+WAL+R+ RVET+ FDYGQR+ VE+E R VR+++ P
Sbjct: 5 ERTDAALVLFSGGQDSSVCLAWALERYGRVETVGFDYGQRHVVEMEARQAVRREVAARFP 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
W D LGEDH+L + G ++ S+LT + A+++ + LP+TFVPGRN++FL++AA LA R
Sbjct: 65 HWADRLGEDHVLDIRSFGAVAQSALTADRAIEMTERGLPSTFVPGRNLVFLIYAAALADR 124
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+ +V G+CETD+SGYPDCR DT+ A+++A+NLGM+ + V TPLMWL K ETW L++
Sbjct: 125 RGVDALVGGMCETDFSGYPDCRRDTLDAMQSALNLGMDRNFRVETPLMWLTKAETWALSK 184
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG+DLV LI+EESHTCY G+R + WG+GC CPAC LR+KG+ E+
Sbjct: 185 ALGGEDLVKLIVEESHTCYQGERGVLHAWGHGCGVCPACELREKGYAEW 233
>gi|16127390|ref|NP_421954.1| exsB protein [Caulobacter crescentus CB15]
gi|221236198|ref|YP_002518635.1| queuosine biosynthesis protein QueC [Caulobacter crescentus NA1000]
gi|81534466|sp|Q9A3P2|QUEC_CAUCR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764317|sp|B8H3X3|QUEC_CAUCN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|13424830|gb|AAK25122.1| exsB protein [Caulobacter crescentus CB15]
gi|220965371|gb|ACL96727.1| queuosine biosynthesis protein QueC [Caulobacter crescentus NA1000]
Length = 242
Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 122/229 (53%), Positives = 179/229 (78%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ +AL+LFSGGQDSS CL+WAL+R+DRVET+ FDYGQR+ +E++ R VR+++ P
Sbjct: 4 RERQAALVLFSGGQDSSVCLAWALERYDRVETVGFDYGQRHAIEMQARQAVRREVAARFP 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+W + LGEDH+L + G ++ S+LT + A+++ + LP+TFVPGRN++FL +AA LA R
Sbjct: 64 QWAERLGEDHVLDIRSFGAVAQSALTADRAIEMTERGLPSTFVPGRNLVFLTYAAALADR 123
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +V G+CETD+SGYPDCR DT+ A++ A+NLGM+ + + TPLMWL K +TW L++
Sbjct: 124 RGIDALVGGMCETDFSGYPDCRRDTLDAMQAALNLGMDRNFRIETPLMWLTKAQTWGLSK 183
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG+ LV+LI+EESHTCY G+R + + WG+GC +CPAC LR+KG++E+
Sbjct: 184 QLGGEALVSLIVEESHTCYQGERGQLHAWGHGCGTCPACELREKGYVEW 232
>gi|296161370|ref|ZP_06844177.1| exsB protein [Burkholderia sp. Ch1-1]
gi|295888356|gb|EFG68167.1| exsB protein [Burkholderia sp. Ch1-1]
Length = 243
Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 122/222 (54%), Positives = 173/222 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R + P W +
Sbjct: 9 SALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVARAFPAWAE 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGEDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQ 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA ++GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFLLETPLMWLDKADTWRLAHELGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+LV L+ E+HTCYLG+R + + WG+GC CPAC LR++G+
Sbjct: 189 AELVELVRVETHTCYLGERAELHAWGFGCGECPACRLRKRGY 230
>gi|332530017|ref|ZP_08405967.1| ExsB [Hylemonella gracilis ATCC 19624]
gi|332040490|gb|EGI76866.1| ExsB [Hylemonella gracilis ATCC 19624]
Length = 234
Score = 291 bits (745), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 129/230 (56%), Positives = 175/230 (76%), Gaps = 4/230 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+ AL R++RVET++FDY QR+ VEL+ RL V ++ P W
Sbjct: 4 SALVLFSGGQDSTTCLAHALSRYERVETIAFDYRQRHVVELDARLRVLDELRRAYPHWAS 63
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH+L +A+LG +S +SLT+ ++Q N LPNTFVPGRN++FL AA +AYR +
Sbjct: 64 RLGQDHLLDVAVLGAVSETSLTRETEFQMQANGLPNTFVPGRNLLFLTLAAAVAYRRDLQ 123
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V GVCETD+SGYPDCR DT++A++ A++LGM+ + + TPLMW+ K ETW+LA+ +GG
Sbjct: 124 VLVTGVCETDFSGYPDCRDDTMKAMQLALSLGMDKRLLIETPLMWIDKAETWRLAETLGG 183
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ LV LI+E +HTCYLG+RD R+ WGYGC CPAC LR +GW E+YQ
Sbjct: 184 KRLVELIVEHTHTCYLGERDHRHAWGYGCGHCPACELRARGW----ERYQ 229
>gi|161526285|ref|YP_001581297.1| exsB protein [Burkholderia multivorans ATCC 17616]
gi|189349001|ref|YP_001944629.1| ExsB protein [Burkholderia multivorans ATCC 17616]
gi|221214676|ref|ZP_03587646.1| exsB protein [Burkholderia multivorans CGD1]
gi|254764314|sp|A9AC62|QUEC_BURM1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|160343714|gb|ABX16800.1| exsB protein [Burkholderia multivorans ATCC 17616]
gi|189333023|dbj|BAG42093.1| ExsB protein [Burkholderia multivorans ATCC 17616]
gi|221165566|gb|EED98042.1| exsB protein [Burkholderia multivorans CGD1]
Length = 244
Score = 291 bits (745), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 176/225 (78%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W D
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRQFPAWAD 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRAIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
Q LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 QALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233
>gi|182677257|ref|YP_001831403.1| exsB protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633140|gb|ACB93914.1| exsB protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 241
Score = 291 bits (745), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 171/226 (75%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WALDRF VET+ F YGQR+ +EL R VR I P W +
Sbjct: 13 ALVLFSGGQDSTTCLAWALDRFAFVETIGFSYGQRHVIELTQRQVVRASIARQFPAWAER 72
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH++ + L +IS ++LT+++A+++ LPNTFVPGRN++FL FA L YR G+ +
Sbjct: 73 LGDDHLVTIEALAEISQTALTRDMAIEMDAQGLPNTFVPGRNLLFLTFAGALGYRRGLKH 132
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
IV G+CETD+SGYPDCR DT++A++ A+NLGM+ + TPLMWL K ETW+LA+ +GGQ
Sbjct: 133 IVGGMCETDFSGYPDCRDDTVKAMQVALNLGMDRRFVLETPLMWLDKAETWRLAEALGGQ 192
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV+LI+EE+HTCYLG+R + WG+GC CPAC LR KG+ +++
Sbjct: 193 ALVDLIIEETHTCYLGERGALHAWGHGCGQCPACVLRAKGYAAYRD 238
>gi|209515826|ref|ZP_03264688.1| exsB protein [Burkholderia sp. H160]
gi|209503674|gb|EEA03668.1| exsB protein [Burkholderia sp. H160]
Length = 243
Score = 291 bits (745), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 173/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WALDR+D VET+ FDYGQR++VELECR R+ +V P W D
Sbjct: 9 SALVLFSGGQDSATCLAWALDRYDTVETIGFDYGQRHRVELECREGFRQAVVRAFPAWAD 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSLLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQ 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ +NLGM+ + TPLMWL K +TW+LA ++GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMDKRFALETPLMWLDKADTWRLAHELGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+ +
Sbjct: 189 DALVELVRVETHTCYVGERAELHSWGFGCGECPACRLRKRGYEAY 233
>gi|325518104|gb|EGC97894.1| ExsB family protein [Burkholderia sp. TJI49]
Length = 244
Score = 291 bits (744), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 177/225 (78%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P+W D
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRQFPQWSD 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 EALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233
>gi|58039976|ref|YP_191940.1| putative aluminum resistance protein [Gluconobacter oxydans 621H]
gi|81351795|sp|Q5FQR2|QUEC_GLUOX RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|58002390|gb|AAW61284.1| Putative aluminum resistance protein [Gluconobacter oxydans 621H]
Length = 242
Score = 290 bits (743), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 130/228 (57%), Positives = 171/228 (75%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RFDRVET+ + YGQR+ +ELECR +R ++ P WK
Sbjct: 7 TALVLFSGGQDSATCLAWALSRFDRVETVGYAYGQRHAIELECRETLRNEMAAFSPDWKA 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH + LA LG +S ++LT+ + + +N LPNTFVPGRNIIFL FAA LA R
Sbjct: 67 RLGEDHTIDLASLGALSETALTREAEIGLSENGLPNTFVPGRNIIFLTFAAALAARRNAR 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV GVCETDYSGYPDCR DTI+A++ +NLGM+ +HTPLMW+ K +TW L +++GG
Sbjct: 127 HIVTGVCETDYSGYPDCRDDTIKALQVTLNLGMDQRFVLHTPLMWIDKAQTWDLTEELGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
Q LVNLI +SH+CY+G R +++WGYGC +CPAC LR GW +++
Sbjct: 187 QKLVNLINRDSHSCYMGDRTHQHDWGYGCGTCPACNLRADGWRRYQQS 234
>gi|163850656|ref|YP_001638699.1| exsB protein [Methylobacterium extorquens PA1]
gi|259551542|sp|A9W222|QUEC_METEP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|163662261|gb|ABY29628.1| exsB protein [Methylobacterium extorquens PA1]
Length = 243
Score = 290 bits (743), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 137/225 (60%), Positives = 175/225 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TCL+WALDRF VETL FDYGQR++VEL+ R +R+ + L P W
Sbjct: 13 GALVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHRVELDRRAALRQGLTALDPAWGR 72
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG DH L LA LG+IS ++LT++ A+ + LPNTFVPGRN+ FL FAA LAYR G+
Sbjct: 73 RLGPDHTLALAALGEISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLR 132
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K +TW LA+ +GG
Sbjct: 133 HIVGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAETLGG 192
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ LV+L++EESHTCYLG+R R+EWGYGC +CPAC LR KG+ +
Sbjct: 193 RALVDLVVEESHTCYLGERGARHEWGYGCGTCPACDLRAKGFSRY 237
>gi|221201866|ref|ZP_03574903.1| exsB protein [Burkholderia multivorans CGD2M]
gi|221207628|ref|ZP_03580636.1| exsB protein [Burkholderia multivorans CGD2]
gi|221172474|gb|EEE04913.1| exsB protein [Burkholderia multivorans CGD2]
gi|221178286|gb|EEE10696.1| exsB protein [Burkholderia multivorans CGD2M]
Length = 244
Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 176/225 (78%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W D
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRQFPAWVD 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRAIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
Q LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 QALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233
>gi|167645046|ref|YP_001682709.1| exsB protein [Caulobacter sp. K31]
gi|189038904|sp|B0SX50|QUEC_CAUSK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167347476|gb|ABZ70211.1| exsB protein [Caulobacter sp. K31]
Length = 250
Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 125/229 (54%), Positives = 176/229 (76%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+A +AL+LFSGGQDSS CL+WAL+R+ RVET+ FDYGQR+ +E+E R+ VR ++ E P
Sbjct: 12 SRADAALVLFSGGQDSSVCLAWALERYARVETVGFDYGQRHHIEMEARVAVRHQVAERFP 71
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
W LGEDH+L L G ++HS+LT +VA+++ + LP+TFVPGRN++FL++AA LA R
Sbjct: 72 HWARRLGEDHVLDLTGFGAVAHSALTADVAIEMTERGLPSTFVPGRNLVFLIYAAALADR 131
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+ +V G+CETD+SGYPDCR DT+ A+++A+NLGM+ + TPLM L K +TW LA+
Sbjct: 132 RGLGALVGGMCETDFSGYPDCRRDTLDAMQSALNLGMDRDFVIETPLMKLTKAQTWALAK 191
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG+DLV+LI+ ESHTCY G+R + WG+GC CPAC LR++G+ E+
Sbjct: 192 SLGGEDLVDLIVVESHTCYQGERGDLHPWGHGCGECPACELRRRGYEEW 240
>gi|170694007|ref|ZP_02885163.1| exsB protein [Burkholderia graminis C4D1M]
gi|170141079|gb|EDT09251.1| exsB protein [Burkholderia graminis C4D1M]
Length = 243
Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 174/225 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WAL+R+D VETL FDYGQR++VELECR R + P W +
Sbjct: 9 SALVLFSGGQDSATCLAWALERYDTVETLGFDYGQRHRVELECREGFRNAVARTFPAWGE 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ + LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISETAMTREIEIEATASGLPNTFVPGRNLMFMTIAAAIAYRRGLE 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM+S + TPLMWL K +TW+LA ++GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFALETPLMWLDKADTWRLAHELGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+ +
Sbjct: 189 DELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAY 233
>gi|78067939|ref|YP_370708.1| ExsB family protein [Burkholderia sp. 383]
gi|110816218|sp|Q39BV2|QUEC_BURS3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|77968684|gb|ABB10064.1| preQ(0) biosynthesis protein QueC [Burkholderia sp. 383]
Length = 244
Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 176/225 (78%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W D
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRDFPAWSD 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLMFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 EALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233
>gi|238028937|ref|YP_002913168.1| exsB protein [Burkholderia glumae BGR1]
gi|237878131|gb|ACR30464.1| ExsB protein [Burkholderia glumae BGR1]
Length = 244
Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 179/230 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P+W
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALRTRFPQWAG 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+++ ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRSIEIETAANGLPNTFVPGRNLLFMTIAAAVAYRRGLK 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKADTWRLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LV L+ E+HTCY+G+R + ++WG+GC +CPAC LR++G+ ++ Q
Sbjct: 189 AALVELVRVETHTCYVGERAELHDWGFGCGACPACKLRRRGYEAYRNGGQ 238
>gi|307728085|ref|YP_003905309.1| exsB protein [Burkholderia sp. CCGE1003]
gi|307582620|gb|ADN56018.1| exsB protein [Burkholderia sp. CCGE1003]
Length = 234
Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 170/224 (75%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WALDR+ VET+ FDYGQR+ +ELECR V + + P+W
Sbjct: 5 ALVLFSGGQDSTTCLAWALDRYQHVETIGFDYGQRHAIELECRQTVLASLRKQFPEWTCK 64
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH+L L+ILG IS ++LT A+++Q N LPNTFVPGRN++F AA +AYR G+
Sbjct: 65 LGDDHMLDLSILGQISDTALTAGKAIEMQKNGLPNTFVPGRNLLFFTLAAAVAYRRGLQV 124
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETDYSGYPDCR T++A++ AI LGM+ V + PLMW+ K +TW++A +GG
Sbjct: 125 LVGGMCETDYSGYPDCRDSTLKALQVAIALGMDQPVVIEAPLMWIDKAQTWQMASQLGGA 184
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV+LIL+E+HTCY+G +++WGYGC +CPAC LRQ+G+ F
Sbjct: 185 KLVDLILDETHTCYVGDHTTQHQWGYGCGTCPACELRQRGYEAF 228
>gi|323524431|ref|YP_004226584.1| exsB protein [Burkholderia sp. CCGE1001]
gi|323381433|gb|ADX53524.1| exsB protein [Burkholderia sp. CCGE1001]
Length = 243
Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 173/222 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R + P W +
Sbjct: 9 SALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVARTFPAWGE 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMVDLSVLGAISETAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQ 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM+S + TPLMWL K +TW+LA ++GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFVLETPLMWLDKADTWRLAHELGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+
Sbjct: 189 DELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGY 230
>gi|319791822|ref|YP_004153462.1| exsb protein [Variovorax paradoxus EPS]
gi|315594285|gb|ADU35351.1| exsB protein [Variovorax paradoxus EPS]
Length = 237
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 129/226 (57%), Positives = 168/226 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+ AL ++ RVETL FDYGQR++VEL+ R + ++ E P W
Sbjct: 6 TALVLFSGGQDSTTCLADALSKYQRVETLGFDYGQRHRVELDVRGTILAQMRERFPDWAP 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH+L LA L + SSLT+ VA +Q + LPNTFVPGRN++FL A LAYR G+
Sbjct: 66 RLGEDHVLTLAALAQLGGSSLTEEVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRGLQ 125
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV GVCETD+SGYPDCR DT++A++ A++LG+E + + TPLMW+ K ETW++A +GG
Sbjct: 126 VIVTGVCETDFSGYPDCRDDTMKAMQLALSLGLERRLVIETPLMWIDKAETWQMAHRLGG 185
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ LV LI+EE+HTCYLG R R WGYGC CPAC LR+KGW +
Sbjct: 186 EPLVELIVEETHTCYLGDRVHRQAWGYGCGECPACDLRKKGWERYS 231
>gi|152981295|ref|YP_001354876.1| ExsB protein [Janthinobacterium sp. Marseille]
gi|167016430|sp|A6T2X9|QUEC_JANMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151281372|gb|ABR89782.1| ExsB protein [Janthinobacterium sp. Marseille]
Length = 235
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 180/233 (77%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A AL+LFSGGQDS+TC++WAL R+ +VET+ FDYGQR+ VELE R V + + ++
Sbjct: 1 MSSADGALVLFSGGQDSTTCVAWALKRYAKVETIGFDYGQRHAVELEVRPDVLRSLRDIN 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P+W LGEDH++ L+++ IS++++T++V + + +N LPNTFVPGRN++F+ AAT+AY
Sbjct: 61 PEWNKKLGEDHMIDLSLISKISNTAMTQDVEITMMENGLPNTFVPGRNLLFMTVAATVAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +V G+CETD+SGYPDCR DT++A++ A+NLGM + + + TPLMW+ K ETWK+A
Sbjct: 121 RRGLDVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATRLKLETPLMWIDKAETWKMA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
QD+GG+ LV+LI +HTCYLG+R ++WGYGC +CPAC LR +G+ F +
Sbjct: 181 QDLGGKPLVDLIRAGTHTCYLGERGALHDWGYGCGTCPACELRARGYANFAAQ 233
>gi|91781439|ref|YP_556645.1| ExsB [Burkholderia xenovorans LB400]
gi|91685393|gb|ABE28593.1| preQ(0) biosynthesis protein QueC [Burkholderia xenovorans LB400]
Length = 232
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 171/219 (78%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R +V P W D LG
Sbjct: 1 MLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVVRAFPAWADRLG 60
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
EDH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+ +V
Sbjct: 61 EDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQVLV 120
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA ++GG +L
Sbjct: 121 GGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFLLETPLMWLDKADTWRLAHELGGAEL 180
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
V L+ E+HTCYLG+R + + WG+GC CPAC LR++G+
Sbjct: 181 VELVRVETHTCYLGERAELHAWGFGCGECPACRLRKRGY 219
>gi|307728150|ref|YP_003905374.1| exsB protein [Burkholderia sp. CCGE1003]
gi|307582685|gb|ADN56083.1| exsB protein [Burkholderia sp. CCGE1003]
Length = 243
Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 174/225 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R + P W +
Sbjct: 9 SALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRSAVARTFPAWGE 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQ 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM+S + TPLMWL K +TW+LA ++GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFLLETPLMWLDKADTWRLAHELGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+ +
Sbjct: 189 DELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAY 233
>gi|187922324|ref|YP_001893966.1| exsB protein [Burkholderia phytofirmans PsJN]
gi|254764316|sp|B2T1L3|QUEC_BURPP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|187713518|gb|ACD14742.1| exsB protein [Burkholderia phytofirmans PsJN]
Length = 244
Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 174/225 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R + P W +
Sbjct: 9 SALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVARAFPAWAE 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQ 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVLLETPLMWLDKGDTWRLAHQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+ +
Sbjct: 189 DELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAY 233
>gi|160896707|ref|YP_001562289.1| exsB protein [Delftia acidovorans SPH-1]
gi|160362291|gb|ABX33904.1| exsB protein [Delftia acidovorans SPH-1]
Length = 252
Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 175/230 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+ AL ++RVETL FDYGQR+ VE++ R VR+++ P+W
Sbjct: 20 AALVLFSGGQDSTTCLAQALSLYERVETLGFDYGQRHSVEMQVRQQVRERLSRDFPQWAP 79
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH+L L +L I SSLT++VA +Q + LPNTFVPGRN++FL A LAYR G++
Sbjct: 80 RLGDDHVLSLDVLQQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRGLS 139
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV GVCETDYSGYPDCR DT++A++ A+NLG+E + + TPLMW+ K +TW++A D+GG
Sbjct: 140 VIVTGVCETDYSGYPDCRDDTMKAMQLALNLGLERRLRIETPLMWIDKAQTWQMAHDLGG 199
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LV+LI ++HTCY G R+ ++WGYGC +CPAC LR +GW +++ + +
Sbjct: 200 DTLVDLIQRDTHTCYQGTRETLHDWGYGCGTCPACDLRARGWHQWQAQRE 249
>gi|107024050|ref|YP_622377.1| ExsB [Burkholderia cenocepacia AU 1054]
gi|116691137|ref|YP_836760.1| exsB protein [Burkholderia cenocepacia HI2424]
gi|170734468|ref|YP_001766415.1| exsB protein [Burkholderia cenocepacia MC0-3]
gi|118574281|sp|Q1BSK1|QUEC_BURCA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016412|sp|A0KBJ0|QUEC_BURCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764312|sp|B1K0I8|QUEC_BURCC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|105894239|gb|ABF77404.1| preQ(0) biosynthesis protein QueC [Burkholderia cenocepacia AU
1054]
gi|116649226|gb|ABK09867.1| preQ(0) biosynthesis protein QueC [Burkholderia cenocepacia HI2424]
gi|169817710|gb|ACA92293.1| exsB protein [Burkholderia cenocepacia MC0-3]
Length = 244
Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 176/225 (78%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W D
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKHRFPAWSD 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLMFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRMVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 EALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233
>gi|103488120|ref|YP_617681.1| ExsB [Sphingopyxis alaskensis RB2256]
gi|118574279|sp|Q1GPS4|QUEC2_SPHAL RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
gi|98978197|gb|ABF54348.1| ExsB [Sphingopyxis alaskensis RB2256]
Length = 236
Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 128/231 (55%), Positives = 171/231 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TCL+WALDRF+ VET+ FDYGQR++VELECR R +IVEL P W
Sbjct: 6 GALVLFSGGQDSATCLAWALDRFETVETVGFDYGQRHRVELECRDDFRARIVELNPAWAA 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG DH L L++LG +S ++LT++ + ++ + LPNTFVPGRN++F AA LA R +
Sbjct: 66 RLGPDHKLDLSVLGQVSETALTRDAEIALRADGLPNTFVPGRNLLFFTLAAALASRRELR 125
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V G+CETDYSGYPDCR DT+++++ +NLG+ S VHTPLMWL K +TW LA+ +GG
Sbjct: 126 HLVGGMCETDYSGYPDCRDDTLKSLQVTLNLGIGSRSVVHTPLMWLDKAQTWGLAKILGG 185
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ LV+LI +HTCY G D+ +WGYGC +CPAC LR KGW E + +
Sbjct: 186 EKLVDLIRTGTHTCYRGDHDRLQDWGYGCGTCPACELRMKGWQEHRSSLDE 236
>gi|330818677|ref|YP_004362382.1| ExsB protein [Burkholderia gladioli BSR3]
gi|327371070|gb|AEA62426.1| ExsB protein [Burkholderia gladioli BSR3]
Length = 244
Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 120/230 (52%), Positives = 179/230 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+ + VETL FDYGQR++VELECR VR+ + P+W +
Sbjct: 9 GALVLFSGGQDSATCVAWALEHYSTVETLGFDYGQRHRVELECREGVREALRTRFPQWTN 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA LAYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRAIEIETSANGLPNTFVPGRNLLFMTIAAALAYRRGLK 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRMVLETPLMWLDKADTWRLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+LV L+ E+HTCY+G+R + ++WG+GC +CPAC LR++G+ ++ Q
Sbjct: 189 AELVELVRVETHTCYVGERAELHDWGFGCGACPACKLRKRGYEAYRSGEQ 238
>gi|300313463|ref|YP_003777555.1| PP-loop superfamily ATPase [Herbaspirillum seropedicae SmR1]
gi|300076248|gb|ADJ65647.1| PP-loop superfamily ATPase protein [Herbaspirillum seropedicae
SmR1]
Length = 263
Score = 288 bits (738), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 123/228 (53%), Positives = 175/228 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WAL R+ RVET+ FDYGQR+ +EL R + +++ P W+
Sbjct: 32 SALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELAVRPALLERMRAFSPDWQT 91
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH++ L+++G IS ++LT++V + +QDN LPNTFVPGRN++F+ AATLAYR G+
Sbjct: 92 RLGEDHMIDLSLIGKISDTALTRDVEIAMQDNGLPNTFVPGRNLLFMTVAATLAYRRGLN 151
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM + + V TPLMW+ K TW LA+ +GG
Sbjct: 152 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAGTWALAELLGG 211
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV+LI ++HTCYLG+R ++WG+GC CPAC LR +G+ ++ +
Sbjct: 212 APLVDLIRTDTHTCYLGERGALHDWGHGCGKCPACELRARGYQQYAAR 259
>gi|188580425|ref|YP_001923870.1| exsB protein [Methylobacterium populi BJ001]
gi|179343923|gb|ACB79335.1| exsB protein [Methylobacterium populi BJ001]
Length = 239
Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/229 (59%), Positives = 177/229 (77%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+LFSGGQDS+TCL+WALDRF VETL FDYGQR++VEL+ R +R+ + L P W+ L
Sbjct: 11 LVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHRVELDRREALRRGVTALDPGWRRRL 70
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
GEDH L LA LG IS ++LT++ A+ + LPNTFVPGRN+ FL FAA LAYR G+ +I
Sbjct: 71 GEDHTLSLAALGAISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRHI 130
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G+CETD+SGYPDCR DTI+A++ A+NLGME +HTPLMW+ K +TW LA+ +GG+
Sbjct: 131 VGGMCETDFSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAEALGGRP 190
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LV+LI+EESHTCYLG+R +R++WGYGC +CPAC LR KG+ + D
Sbjct: 191 LVDLIVEESHTCYLGERGERHDWGYGCGTCPACDLRAKGFARYLAARAD 239
>gi|206558875|ref|YP_002229635.1| putative putative transcriptional regulator [Burkholderia
cenocepacia J2315]
gi|254764313|sp|B4E7W5|QUEC_BURCJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|198034912|emb|CAR50784.1| putative putative transcriptional regulator [Burkholderia
cenocepacia J2315]
Length = 244
Score = 288 bits (737), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 175/225 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W D
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKHRFPAWSD 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLMFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRMVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 DALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233
>gi|240137710|ref|YP_002962181.1| putative regulator, ATP-binding [Methylobacterium extorquens AM1]
gi|254560280|ref|YP_003067375.1| regulator, ATP-binding [Methylobacterium extorquens DM4]
gi|240007678|gb|ACS38904.1| Putative regulator, ATP-binding [Methylobacterium extorquens AM1]
gi|254267558|emb|CAX23400.1| Putative regulator, ATP-binding [Methylobacterium extorquens DM4]
Length = 243
Score = 287 bits (735), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 136/223 (60%), Positives = 174/223 (78%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+LFSGGQDS+TCL+WALDRF VETL FDYGQR++VEL+ R +R+ + L P W L
Sbjct: 15 LVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHRVELDRRAALRQGLTALDPAWGRRL 74
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
G DH L LA LG+IS ++LT++ A+ + LPNTFVPGRN+ FL FAA LAYR G+ +I
Sbjct: 75 GPDHTLALAALGEISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRHI 134
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K +TW LA+ +GG+
Sbjct: 135 VGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAETLGGRA 194
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV+L++EESHTCYLG+R R+EWGYGC +CPAC LR KG+ +
Sbjct: 195 LVDLVVEESHTCYLGERGARHEWGYGCGTCPACDLRAKGFSRY 237
>gi|254418985|ref|ZP_05032709.1| exsB protein [Brevundimonas sp. BAL3]
gi|196185162|gb|EDX80138.1| exsB protein [Brevundimonas sp. BAL3]
Length = 256
Score = 287 bits (735), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 130/232 (56%), Positives = 175/232 (75%), Gaps = 1/232 (0%)
Query: 1 MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M+ I++K+P SAL+LFSGGQDS+TCL+WAL+RF+RVET+ FDYGQR++VE+E R VR
Sbjct: 14 MSVILEKSPTSALVLFSGGQDSATCLAWALERFERVETVGFDYGQRHRVEMEARQAVRAG 73
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +P++ D LG+DH++ L G I+ S+LT + +++ LP TFVPGRN+IFLV A
Sbjct: 74 MGAALPQYADRLGDDHVVDLTGYGRIAESALTADRKIEMDARGLPTTFVPGRNLIFLVAA 133
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA R G+ +V G+CETDYSGYPDCRH+T+ A+ A++LG++ V + TPLMWL K +
Sbjct: 134 AALADRRGLEVLVGGMCETDYSGYPDCRHETMEAMARALSLGLDKPVVIDTPLMWLTKGQ 193
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
TW LA+ IGG+ LV LI+E+SHTCY G R R+ WGYGC CPAC LR G+
Sbjct: 194 TWALAERIGGEALVELIIEDSHTCYQGDRTHRHAWGYGCGECPACELRAAGY 245
>gi|326314995|ref|YP_004232667.1| exsB protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323371831|gb|ADX44100.1| exsB protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 236
Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 172/225 (76%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A AL+LFSGGQDS+TCL+WAL+RF+RVET+ FDYGQR+ VELE R V + E P+
Sbjct: 2 RAGHALVLFSGGQDSTTCLAWALERFERVETIGFDYGQRHHVELEARTAVLAALRERFPR 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W++ LGEDH++ LA+LG IS ++LT++ A+++ + LPNTFVPGRN++F AA + YR
Sbjct: 62 WRERLGEDHMVDLAVLGQISDTALTRDTAIQMTEAGLPNTFVPGRNLLFFQLAAAVGYRR 121
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +V G+CETD+SGYPDCR DT++A++ A++LGM T+ TPLMW+ K TW++A+
Sbjct: 122 GLHTLVGGMCETDFSGYPDCRDDTLKALQVALSLGMGQRFTIETPLMWIDKAATWEMARQ 181
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+GG +LV LI+E++HTCY G R + WG+GC CPAC LR+ G+
Sbjct: 182 LGGDELVRLIVEDTHTCYHGVRGALHAWGHGCGECPACALRRAGY 226
>gi|171319448|ref|ZP_02908553.1| exsB protein [Burkholderia ambifaria MEX-5]
gi|171095340|gb|EDT40321.1| exsB protein [Burkholderia ambifaria MEX-5]
Length = 244
Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 173/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P W
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHQFPAWAG 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLLFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV LI E+HTCY+G+R + +EWG+GC CPAC LR++G+ +
Sbjct: 189 DALVELIRVETHTCYVGERAELHEWGFGCGECPACKLRKRGYEAY 233
>gi|209545506|ref|YP_002277735.1| exsB protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209533183|gb|ACI53120.1| exsB protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 245
Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 171/231 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ VEL CR +R + L P W
Sbjct: 14 AAIVLFSGGQDSATCLAWALSRFGRVETVGFDYGQRHAVELACRARLRDGMAALDPDWAT 73
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH L L LG +S ++LT++ A+ + +N LP+TFVPGRN+IFL FAA LA R G
Sbjct: 74 RLGQDHTLALDALGAVSDTALTRDAAITMNENGLPSTFVPGRNLIFLTFAAALAARRGAR 133
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR DTI+A++ A+NLGM S +HTPLMW+ K ETW++A+ +GG
Sbjct: 134 HIVGGMCETDYSGYPDCRDDTIKAMQVALNLGMASRYVLHTPLMWIDKAETWRMAEGVGG 193
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
DLV LI ESH+CYLG RD + WG+GC +CPAC LR+ GW + D
Sbjct: 194 ADLVELINRESHSCYLGVRDVMHPWGHGCGTCPACMLRRAGWERYVADGAD 244
>gi|53717819|ref|YP_106805.1| hypothetical protein BPSL0177 [Burkholderia pseudomallei K96243]
gi|53724958|ref|YP_101991.1| exsB protein [Burkholderia mallei ATCC 23344]
gi|76810042|ref|YP_331770.1| exsB protein [Burkholderia pseudomallei 1710b]
gi|121599254|ref|YP_994091.1| exsB protein [Burkholderia mallei SAVP1]
gi|124386328|ref|YP_001028246.1| exsB protein [Burkholderia mallei NCTC 10229]
gi|126440314|ref|YP_001057214.1| ExsB protein [Burkholderia pseudomallei 668]
gi|126449865|ref|YP_001081889.1| exsB protein [Burkholderia mallei NCTC 10247]
gi|126455276|ref|YP_001064454.1| exsB protein [Burkholderia pseudomallei 1106a]
gi|134284079|ref|ZP_01770773.1| exsB protein [Burkholderia pseudomallei 305]
gi|167003283|ref|ZP_02269072.1| exsB protein [Burkholderia mallei PRL-20]
gi|217425012|ref|ZP_03456508.1| protein ExsB [Burkholderia pseudomallei 576]
gi|226194594|ref|ZP_03790189.1| exsB protein [Burkholderia pseudomallei Pakistan 9]
gi|237810349|ref|YP_002894800.1| ExsB protein [Burkholderia pseudomallei MSHR346]
gi|238561921|ref|ZP_00441217.2| ExsB protein [Burkholderia mallei GB8 horse 4]
gi|242316798|ref|ZP_04815814.1| exsB protein [Burkholderia pseudomallei 1106b]
gi|254177086|ref|ZP_04883743.1| exsB protein [Burkholderia mallei ATCC 10399]
gi|254182244|ref|ZP_04888841.1| exsB protein [Burkholderia pseudomallei 1655]
gi|254188168|ref|ZP_04894680.1| exsB protein [Burkholderia pseudomallei Pasteur 52237]
gi|254196853|ref|ZP_04903277.1| exsB protein [Burkholderia pseudomallei S13]
gi|254203671|ref|ZP_04910031.1| exsB protein [Burkholderia mallei FMH]
gi|254208647|ref|ZP_04914995.1| exsB protein [Burkholderia mallei JHU]
gi|254258405|ref|ZP_04949459.1| exsB protein [Burkholderia pseudomallei 1710a]
gi|254360299|ref|ZP_04976569.1| exsB protein [Burkholderia mallei 2002721280]
gi|81380692|sp|Q63YL0|QUEC_BURPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81605690|sp|Q62MS6|QUEC_BURMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816217|sp|Q3JXD3|QUEC_BURP1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016413|sp|A3MNQ3|QUEC_BURM7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016414|sp|A2S8H7|QUEC_BURM9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016415|sp|A1V788|QUEC_BURMS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016416|sp|A3NQ33|QUEC_BURP0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016417|sp|A3N4E3|QUEC_BURP6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|52208233|emb|CAH34164.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52428381|gb|AAU48974.1| exsB protein [Burkholderia mallei ATCC 23344]
gi|76579495|gb|ABA48970.1| exsB protein [Burkholderia pseudomallei 1710b]
gi|121228064|gb|ABM50582.1| exsB protein [Burkholderia mallei SAVP1]
gi|124294348|gb|ABN03617.1| protein ExsB [Burkholderia mallei NCTC 10229]
gi|126219807|gb|ABN83313.1| protein ExsB [Burkholderia pseudomallei 668]
gi|126228918|gb|ABN92458.1| exsB protein [Burkholderia pseudomallei 1106a]
gi|126242735|gb|ABO05828.1| protein ExsB [Burkholderia mallei NCTC 10247]
gi|134244531|gb|EBA44635.1| exsB protein [Burkholderia pseudomallei 305]
gi|147745183|gb|EDK52263.1| exsB protein [Burkholderia mallei FMH]
gi|147750523|gb|EDK57592.1| exsB protein [Burkholderia mallei JHU]
gi|148029539|gb|EDK87444.1| exsB protein [Burkholderia mallei 2002721280]
gi|157935848|gb|EDO91518.1| exsB protein [Burkholderia pseudomallei Pasteur 52237]
gi|160698127|gb|EDP88097.1| exsB protein [Burkholderia mallei ATCC 10399]
gi|169653596|gb|EDS86289.1| exsB protein [Burkholderia pseudomallei S13]
gi|184212782|gb|EDU09825.1| exsB protein [Burkholderia pseudomallei 1655]
gi|217392032|gb|EEC32058.1| protein ExsB [Burkholderia pseudomallei 576]
gi|225933295|gb|EEH29287.1| exsB protein [Burkholderia pseudomallei Pakistan 9]
gi|237506493|gb|ACQ98811.1| ExsB protein [Burkholderia pseudomallei MSHR346]
gi|238523619|gb|EEP87056.1| ExsB protein [Burkholderia mallei GB8 horse 4]
gi|242140037|gb|EES26439.1| exsB protein [Burkholderia pseudomallei 1106b]
gi|243061140|gb|EES43326.1| exsB protein [Burkholderia mallei PRL-20]
gi|254217094|gb|EET06478.1| exsB protein [Burkholderia pseudomallei 1710a]
Length = 244
Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 172/222 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P+W
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSH 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 KLGDDHLIDLSVLGSISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA+ +GG
Sbjct: 129 ALVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+
Sbjct: 189 APLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGY 230
>gi|134297294|ref|YP_001121029.1| exsB protein [Burkholderia vietnamiensis G4]
gi|167016418|sp|A4JIU1|QUEC_BURVG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|134140451|gb|ABO56194.1| preQ(0) biosynthesis protein QueC [Burkholderia vietnamiensis G4]
Length = 244
Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 173/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P W
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHRFPAWAG 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 AALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233
>gi|171060676|ref|YP_001793025.1| exsB protein [Leptothrix cholodnii SP-6]
gi|254764357|sp|B1Y8J4|QUEC_LEPCP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|170778121|gb|ACB36260.1| exsB protein [Leptothrix cholodnii SP-6]
Length = 235
Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 173/225 (76%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ + +AL+LFSGGQDS+TCL+WAL RF VETL+FDYGQR+++EL+CRL V ++ E P
Sbjct: 3 RDSRTALVLFSGGQDSTTCLAWALTRFAHVETLAFDYGQRHRIELDCRLTVLAQLREQFP 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
W + LG DH+L L++L IS ++LT +++Q N LPNTFVPGRN++FL AATLAYR
Sbjct: 63 DWAERLGADHLLDLSLLAQISDTALTTEREIELQANGLPNTFVPGRNLLFLGMAATLAYR 122
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ +V G+CETDYSGYPDCR +T++A++ A++LG+ + +T+ TPLM+L K +TW LA+
Sbjct: 123 RSASVLVGGMCETDYSGYPDCRDNTLKALQVALSLGLAAPMTIETPLMFLTKAQTWTLAE 182
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D+GG LV LI E +HTCYLG+R +R+ WG+GC CPAC LR G
Sbjct: 183 DLGGAPLVELITEHTHTCYLGERGQRHAWGHGCGHCPACELRHAG 227
>gi|162148727|ref|YP_001603188.1| succinoglycan protein [Gluconacetobacter diazotrophicus PAl 5]
gi|189038916|sp|A9HRF6|QUEC_GLUDA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|161787304|emb|CAP56898.1| Succinoglycan protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 245
Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 171/231 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ VEL CR +R + L P W
Sbjct: 14 AAIVLFSGGQDSATCLAWALSRFGRVETVGFDYGQRHAVELACRARLRDGMAALDPDWAT 73
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH L L LG +S ++LT++ A+ + +N LP+TFVPGRN+IFL FAA LA R G
Sbjct: 74 RLGQDHTLALDALGTVSDTALTRDAAITMNENGLPSTFVPGRNLIFLTFAAALAARRGAR 133
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR DTI+A++ A+NLGM S +HTPLMW+ K ETW++A+ +GG
Sbjct: 134 HIVGGMCETDYSGYPDCRDDTIKAMQVALNLGMASRYVLHTPLMWIDKAETWRMAEGLGG 193
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
DLV LI ESH+CYLG RD + WG+GC +CPAC LR+ GW + D
Sbjct: 194 ADLVELINRESHSCYLGVRDVMHPWGHGCGTCPACMLRRAGWERYVADGAD 244
>gi|46581063|ref|YP_011871.1| exsB protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601646|ref|YP_966046.1| exsB protein [Desulfovibrio vulgaris DP4]
gi|81404359|sp|Q728E4|QUEC_DESVH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016424|sp|A1VB03|QUEC_DESVV RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|46450484|gb|AAS97131.1| exsB protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120561875|gb|ABM27619.1| preQ(0) biosynthesis protein QueC [Desulfovibrio vulgaris DP4]
gi|311234740|gb|ADP87594.1| exsB protein [Desulfovibrio vulgaris RCH1]
Length = 242
Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 167/222 (75%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL++FSGGQDS+TCL WAL+RF V T+ F YGQR+ VE++CR V I ++ P WK
Sbjct: 7 NALVIFSGGQDSTTCLGWALNRFRTVATIGFHYGQRHDVEMQCRQDVLAAIGDVRPGWKA 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG D ++ + + ++ ++LT +VA+++ N LP+TFVPGRN++FL AA AYR GI
Sbjct: 67 HLGTDTVVEMGLFRELGETALTHDVAIEMGRNGLPSTFVPGRNLMFLTAAAACAYRQGIR 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V+GVCETD+SGYPDCR D ++A++ A+NLGMES VHTPLMWL K +TW +A+D GG
Sbjct: 127 HLVLGVCETDFSGYPDCRDDAMKAMQVALNLGMESRFVVHTPLMWLTKAQTWDMARDEGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
QD V L+LE SHTCY G RD R+ WGYGC +CPAC LR+ GW
Sbjct: 187 QDFVELVLERSHTCYKGVRDVRHPWGYGCGTCPACELRRAGW 228
>gi|167561071|ref|ZP_02353987.1| exsB protein [Burkholderia oklahomensis EO147]
gi|167568300|ref|ZP_02361174.1| exsB protein [Burkholderia oklahomensis C6786]
Length = 244
Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 177/230 (76%), Gaps = 4/230 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + + P+W++
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECRDGVRDALKQRFPQWEN 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ A +AYR G+
Sbjct: 69 KLGDDHMIDLSVLGAISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIGAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ +NLGM++ + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMDTRFVLETPLMWLDKADTWRLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ E YQ
Sbjct: 189 KPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGY----EAYQ 234
>gi|115353225|ref|YP_775064.1| exsB protein [Burkholderia ambifaria AMMD]
gi|172062097|ref|YP_001809749.1| exsB protein [Burkholderia ambifaria MC40-6]
gi|122321936|sp|Q0BAU3|QUEC_BURCM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764311|sp|B1YPW9|QUEC_BURA4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|115283213|gb|ABI88730.1| preQ(0) biosynthesis protein QueC [Burkholderia ambifaria AMMD]
gi|171994614|gb|ACB65533.1| exsB protein [Burkholderia ambifaria MC40-6]
Length = 244
Score = 285 bits (729), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 173/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P W
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHRFPAWAG 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLLFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 DALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233
>gi|254295715|ref|ZP_04963172.1| exsB protein [Burkholderia pseudomallei 406e]
gi|157806285|gb|EDO83455.1| exsB protein [Burkholderia pseudomallei 406e]
Length = 244
Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 172/222 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P+W
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSH 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 KLGDDHLIDLSVLGSISDTAMTRAIEIETALNGLPNTFVPGRNLLFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA+ +GG
Sbjct: 129 ALVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+
Sbjct: 189 APLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGY 230
>gi|83719597|ref|YP_440695.1| exsB protein [Burkholderia thailandensis E264]
gi|167579366|ref|ZP_02372240.1| exsB protein [Burkholderia thailandensis TXDOH]
gi|167617467|ref|ZP_02386098.1| exsB protein [Burkholderia thailandensis Bt4]
gi|257140657|ref|ZP_05588919.1| exsB protein [Burkholderia thailandensis E264]
gi|110816219|sp|Q2T2A4|QUEC_BURTA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|83653422|gb|ABC37485.1| exsB protein [Burkholderia thailandensis E264]
Length = 244
Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 173/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P+W
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSH 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ A +AYR G+
Sbjct: 69 KLGDDHMIDLSVLGAISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIGAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA+ +GG
Sbjct: 129 ALVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 KPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGFEAY 233
>gi|114799592|ref|YP_759261.1| exsB protein [Hyphomonas neptunium ATCC 15444]
gi|123028353|sp|Q0C4T2|QUEC_HYPNA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114739766|gb|ABI77891.1| exsB protein [Hyphomonas neptunium ATCC 15444]
Length = 239
Score = 285 bits (728), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 124/227 (54%), Positives = 166/227 (73%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+WALDRFDRVET+ FDYGQR+ +EL CR VR I ++ P W +
Sbjct: 7 SALVLFSGGQDSATCLAWALDRFDRVETIGFDYGQRHAIELACRPKVRAAIRQMSPVWAE 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH++ +L + +++T V + + LPNTFVPGRN++F A LA R GI
Sbjct: 67 KLGEDHMIDAGVLKSLGATAMTHEVEISMTAAGLPNTFVPGRNLLFFTLAGALAVRRGIG 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETDYSGYPDCR DT++A E + LG+++ + + PLM+L K TW+LAQ++GG
Sbjct: 127 VLVGGMCETDYSGYPDCRADTLKAQEQTLRLGLDADIRIDAPLMYLDKAATWQLAQELGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV LI EE+HTCYLG+R R++WGYGC +CPAC LR GW +++
Sbjct: 187 DALVALIGEETHTCYLGERGARHDWGYGCGTCPACELRSNGWQRWQD 233
>gi|218529380|ref|YP_002420196.1| exsB protein [Methylobacterium chloromethanicum CM4]
gi|259551539|sp|B7KR63|QUEC_METC4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218521683|gb|ACK82268.1| exsB protein [Methylobacterium chloromethanicum CM4]
Length = 243
Score = 284 bits (727), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 137/229 (59%), Positives = 173/229 (75%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+LFSGGQDS+TCL+WALDRF VETL FDYGQR+ VEL+ R +R+ + L P W L
Sbjct: 15 LVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHWVELDRRAALRQGLTALDPAWGRRL 74
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
G DH L LA LG+IS ++LT++ A+ + LPNTFVPGRN+ FL FAA LAYR G+ +I
Sbjct: 75 GPDHTLALAALGEISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRHI 134
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K +TW LA+ +GG+
Sbjct: 135 VGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAETLGGRA 194
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LV L++EESHTCYLG+R R+EWGYGC +CPAC LR KG+ + D
Sbjct: 195 LVELVVEESHTCYLGERGARHEWGYGCGTCPACDLRAKGFSRYLAARAD 243
>gi|296115260|ref|ZP_06833900.1| exsB protein [Gluconacetobacter hansenii ATCC 23769]
gi|295978163|gb|EFG84901.1| exsB protein [Gluconacetobacter hansenii ATCC 23769]
Length = 248
Score = 284 bits (726), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 132/230 (57%), Positives = 164/230 (71%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL++FSGGQDS+TCL+WAL RF VETL FDYGQR+ VEL CR +R + L P W
Sbjct: 15 SALVVFSGGQDSATCLAWALSRFAHVETLGFDYGQRHSVELSCRAALRDGMARLDPAWAA 74
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG DH L L LG +S ++LT+ + + +N LP TFVPGRNIIFL FAA LA R
Sbjct: 75 RLGPDHTLSLDALGAVSDTALTREAEITLGENGLPTTFVPGRNIIFLTFAAALAARRNAR 134
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV GVCETDYSGYPDCR DTI+A++ +NLGM S + +HTPLMW+ K +TW +AQ++GG
Sbjct: 135 HIVTGVCETDYSGYPDCRDDTIKALQVTLNLGMASRLVLHTPLMWIDKAQTWLMAQELGG 194
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LV LI ESH+CYLG R + WG+GC +CPAC LR+ GW F+ Q
Sbjct: 195 DALVGLINRESHSCYLGTRGVMHPWGHGCGTCPACQLRRAGWERFRAMTQ 244
>gi|167834986|ref|ZP_02461869.1| exsB protein [Burkholderia thailandensis MSMB43]
Length = 244
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 172/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P+W
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSH 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ A +AYR G+
Sbjct: 69 KLGDDHMVDLSVLGAISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIGAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ +NLGM+S + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMDSRFVLETPLMWLDKADTWRLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 KPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGFEAY 233
>gi|134096097|ref|YP_001101172.1| regulatory protein [Herminiimonas arsenicoxydans]
gi|167016429|sp|A4G964|QUEC_HERAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|133740000|emb|CAL63051.1| Queuosine biosynthesis protein QueC [Herminiimonas arsenicoxydans]
Length = 233
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 175/230 (76%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A SAL+LFSGGQDS+TCL+WAL + RVET+ FDYGQR+ +EL R + +K+ +
Sbjct: 1 MNSANSALVLFSGGQDSTTCLAWALTHYARVETIGFDYGQRHAIELAVRPFLLEKMRLIS 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P+W LG DH++ L+++ IS+++LT NV + + +N LPNTFVPGRN++F+ AAT+AY
Sbjct: 61 PEWDGRLGADHMIDLSLIAKISNTALTSNVEIAMLENGLPNTFVPGRNLLFMTVAATVAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +V G+CETD+SGYPDCR DT++A++ +NLGM + + V TPLMW+ K TWK+A
Sbjct: 121 RRGLDVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATKLKVETPLMWIDKAATWKMA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
QD+GG L+NL+ +HTCYLG+R + ++WGYGC +CPAC LR +G+ +F
Sbjct: 181 QDLGGTPLLNLVRTGTHTCYLGERGELHDWGYGCGNCPACKLRARGYADF 230
>gi|212702261|ref|ZP_03310389.1| hypothetical protein DESPIG_00272 [Desulfovibrio piger ATCC 29098]
gi|212674324|gb|EEB34807.1| hypothetical protein DESPIG_00272 [Desulfovibrio piger ATCC 29098]
Length = 242
Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 125/229 (54%), Positives = 171/229 (74%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL+WAL RF RV TL FDYGQR+ VELECR VR I L P+W+D
Sbjct: 12 ALVIFSGGQDSATCLAWALSRFARVCTLGFDYGQRHSVELECRGKVRSAIAALKPEWQDR 71
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG D +L +++ ++ ++LT ++ ++ + +PNTFVPGRN++F++ AA AY I +
Sbjct: 72 LGPDTLLDISLFRQLADTALTSDMPIEQEGEGIPNTFVPGRNLLFIMHAAAWAYGKDIRH 131
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V+GVCE+D SGYPDCR D+I+A++ A+N GM+SH +HTPLMWL K +TW+LA+D+GG
Sbjct: 132 LVLGVCESDSSGYPDCRDDSIKAMQVALNTGMDSHFVLHTPLMWLDKADTWRLAEDLGGM 191
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LV+ ILE+SHTCY G R +RY WGYGC CPAC LR G+ + +Y
Sbjct: 192 PLVDCILEQSHTCYEGTRGERYPWGYGCGRCPACKLRAHGYEVYLSRYH 240
>gi|170703436|ref|ZP_02894208.1| exsB protein [Burkholderia ambifaria IOP40-10]
gi|170131651|gb|EDT00207.1| exsB protein [Burkholderia ambifaria IOP40-10]
Length = 244
Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 172/225 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + W
Sbjct: 9 GALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHRFTAWAG 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 69 RLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLLFMTIAAAIAYRRGLR 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 129 VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 189 DALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233
>gi|120608847|ref|YP_968525.1| exsB protein [Acidovorax citrulli AAC00-1]
gi|189038886|sp|A1TIG3|QUEC_ACIAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|120587311|gb|ABM30751.1| preQ(0) biosynthesis protein QueC [Acidovorax citrulli AAC00-1]
Length = 235
Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 168/224 (75%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A AL+LFSGGQDS+TCL+WAL+RF+RVET+ FDYGQR+ VELE R V + P
Sbjct: 2 RAGHALVLFSGGQDSTTCLAWALERFERVETIGFDYGQRHHVELEARTAVLAALRGRFPA 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LG+DH++ LA+LG IS ++LT++ A+++ + LPNTFVPGRN++F AA + YR
Sbjct: 62 WSARLGDDHMVDLAVLGQISDTALTRDTAIQMTEAGLPNTFVPGRNLLFFQLAAAVGYRR 121
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +V G+CETD+SGYPDCR DT++A++ A++LGM T+ TPLMW+ K ETW++A+
Sbjct: 122 GLHTLVGGMCETDFSGYPDCRDDTLKALQVALSLGMGQRFTIETPLMWIDKAETWEMARQ 181
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+GG +LV LI+E++HTCY G R + WG+GC CPAC LR+ G
Sbjct: 182 LGGDELVQLIVEDTHTCYHGVRGALHAWGHGCGECPACALRRAG 225
>gi|89899546|ref|YP_522017.1| ExsB [Rhodoferax ferrireducens T118]
gi|110816253|sp|Q220R7|QUEC_RHOFD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|89344283|gb|ABD68486.1| ExsB [Rhodoferax ferrireducens T118]
Length = 243
Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 172/233 (73%), Gaps = 8/233 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+ AL ++ RVET++FDY QR+ VEL+ RL V +I P+W
Sbjct: 4 TALVLFSGGQDSTTCLALALSKYQRVETIAFDYRQRHLVELDARLIVLNEIRARFPQWAS 63
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH+L LA+LG++S +SLT++ A K++ + LPNTFVPGRN++FL AA +AYR +
Sbjct: 64 KLGEDHLLDLAVLGEVSDTSLTRDTAFKMEQSGLPNTFVPGRNLLFLTLAAAVAYRRDLQ 123
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI-- 187
+V GVCETD+SGYPDCR DTI+A++ A++LGM+ + TPLMW+ K TW LA ++
Sbjct: 124 VMVTGVCETDFSGYPDCRDDTIKAMQLALSLGMDKRFLIETPLMWIDKAATWALAYELGE 183
Query: 188 ------GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GGQ LV+LI+E +HTCYLG R R+ WGYGC SCPAC LR +G+ +
Sbjct: 184 KSGTPGGGQALVDLIIEHTHTCYLGDRQHRHAWGYGCGSCPACELRARGYERY 236
>gi|124265463|ref|YP_001019467.1| hypothetical protein Mpe_A0270 [Methylibium petroleiphilum PM1]
gi|189038926|sp|A2SCE3|QUEC_METPP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|124258238|gb|ABM93232.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 235
Score = 281 bits (719), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 167/222 (75%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+ CL+WAL+ VET+ FDYGQR+ VELECR+ VR+ I P W
Sbjct: 7 GALVLFSGGQDSTACLAWALEHHAHVETIGFDYGQRHVVELECRVQVREAIARSFPLWAG 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L DH+L L +LG IS ++LT A+++Q N LP+TFVPGRN++FL FAAT+AYR ++
Sbjct: 67 RLANDHVLDLGLLGQISDTALTSARAIEMQANGLPSTFVPGRNLLFLGFAATVAYRRNLS 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETDYSGYPDCR +T++A++ A++LGM + +T+ TPLMWL K TW L +GG
Sbjct: 127 VLVGGMCETDYSGYPDCRDNTLKALQVALSLGMATPMTIETPLMWLDKARTWALTDRLGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ L LILE +H+CYLG R R+ WGYGCN+CPAC LR+KG+
Sbjct: 187 RALNELILEHTHSCYLGDRSVRHAWGYGCNACPACELRRKGY 228
>gi|329889513|ref|ZP_08267856.1| queuosine biosynthesis protein queC [Brevundimonas diminuta ATCC
11568]
gi|328844814|gb|EGF94378.1| queuosine biosynthesis protein queC [Brevundimonas diminuta ATCC
11568]
Length = 234
Score = 281 bits (718), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 167/218 (76%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL+RFDRVET+ FDYGQR+ VE++ R VR+++V+ +P+W D
Sbjct: 7 TALVLFSGGQDSATCLAWALERFDRVETVGFDYGQRHAVEMQARQSVREELVKALPQWAD 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L G I +++T A++ LPNTFVPGRN+IFLV AA LA R G+
Sbjct: 67 RLGDDHVVDLTGFGAIGETAMTTERAIEADARGLPNTFVPGRNLIFLVAAAALADRRGLE 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G+CETDYSGYPDCR+DTI+A A++LG++ V V TPLM+L K +TW+LA IGG
Sbjct: 127 VLIGGMCETDYSGYPDCRNDTIQATARALSLGLDKSVPVETPLMFLTKAQTWELADQIGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ LV I+E SHTCYLG R R+ WGYGC +CPAC LR
Sbjct: 187 RVLVKAIIEFSHTCYLGDRTHRHVWGYGCGACPACELR 224
>gi|302383450|ref|YP_003819273.1| exsB protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194078|gb|ADL01650.1| exsB protein [Brevundimonas subvibrioides ATCC 15264]
Length = 238
Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 166/231 (71%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + SAL+LFSGGQDS+TCL+WAL+RFDRVET+ FDYGQR+ VE++ RL VR +
Sbjct: 1 MTETQPAPSSALVLFSGGQDSATCLAWALERFDRVETVGFDYGQRHAVEMDARLRVRAGM 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++P+ D LG DH++ L G I +++T + A+++ LP TFVPGRN+IFL AA
Sbjct: 61 PRVLPRLADRLGPDHVVDLTGFGAIGETAMTTDRAIEVGARGLPTTFVPGRNLIFLTAAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA R G+ +V G+CETD+SGYPDCR +T+ A+E A++LG++ V + TPLMWL K T
Sbjct: 121 ALADRRGLEVLVGGMCETDFSGYPDCRRETMDAMERALSLGLDRPVPIQTPLMWLTKART 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
W LA IGG LV+LI+E+SHTCY G R R+ WGYGC +CPAC LR GW
Sbjct: 181 WALADAIGGAALVDLIVEDSHTCYRGDRTHRHAWGYGCGACPACELRAAGW 231
>gi|91786636|ref|YP_547588.1| ExsB [Polaromonas sp. JS666]
gi|118574292|sp|Q12FK2|QUEC_POLSJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91695861|gb|ABE42690.1| preQ(0) biosynthesis protein QueC [Polaromonas sp. JS666]
Length = 235
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/225 (58%), Positives = 176/225 (78%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+ AL +++RVET++FDYGQR+KVEL+ RL V ++I P W
Sbjct: 4 SALVLFSGGQDSTTCLAQALSKYERVETVAFDYGQRHKVELDARLNVLREIKSRFPHWAP 63
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH+L LA+LG +S +SLT++VA K++++ LPNTFVPGRN++FL AA LAYR +
Sbjct: 64 KLGEDHLLDLAVLGQVSDTSLTRDVAFKMENSGLPNTFVPGRNLLFLTLAAALAYRRDLQ 123
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V GVCETD+SGYPDCR DTI+A++ A++LGM+ + TPLMW+ K +TW+LA +GG
Sbjct: 124 VLVTGVCETDFSGYPDCRDDTIKAMQLALSLGMDKRFLIETPLMWIDKADTWRLAHALGG 183
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
Q LV+LI+E +HTCYLG R R WGYGC +CPAC LR +G+ +
Sbjct: 184 QALVDLIIEHTHTCYLGDRTHRQAWGYGCGACPACELRARGYERY 228
>gi|163858842|ref|YP_001633140.1| putative exsB protein [Bordetella petrii DSM 12804]
gi|163262570|emb|CAP44873.1| putative exsB protein [Bordetella petrii]
Length = 238
Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 176/230 (76%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WALDR+ VET++FDYGQR+++EL+ RL V +++ P+W
Sbjct: 8 ALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHRIELDARLNVLRELRAQFPQWAGR 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LGEDH+L L +LG + +++T A+++Q N LPNTFVPGRN++FL AA L YR +
Sbjct: 68 LGEDHLLDLRVLGQVGDTAMTSERAIEMQANGLPNTFVPGRNLLFLALAAALGYRRQLDV 127
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DTI+A + A+ LG+ + VT+ TPLMW+ K +TW LA+ +GGQ
Sbjct: 128 LVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGTRVTIETPLMWIDKADTWALARQLGGQ 187
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LV LI+E SHTCYLG+R R++WGYGC +CPAC LR+ GW ++++ D
Sbjct: 188 ALVALIVEHSHTCYLGERGARHDWGYGCGTCPACALRKAGWQRWRDQAGD 237
>gi|330994294|ref|ZP_08318222.1| 7-cyano-7-deazaguanine synthase [Gluconacetobacter sp. SXCC-1]
gi|329758761|gb|EGG75277.1| 7-cyano-7-deazaguanine synthase [Gluconacetobacter sp. SXCC-1]
Length = 245
Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/225 (59%), Positives = 168/225 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ VELECR +R+ + P+W
Sbjct: 14 AALVLFSGGQDSATCLAWALARFGRVETLGFDYGQRHAVELECRATLREGMATENPQWAA 73
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG DH L LA+LG +S ++LT+ + + +N LPNTFVPGRN++FL FAA LA R I
Sbjct: 74 RLGADHTLDLAVLGTLSDTALTREAEITLNENGLPNTFVPGRNLLFLTFAAALAARRNIR 133
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+ GVCETDYSGYPDCR DTI++++ +NLGM SH +HTPLMWL K TW+LA+ +GG
Sbjct: 134 HIITGVCETDYSGYPDCRDDTIKSLQVTLNLGMASHYVLHTPLMWLDKARTWELARTLGG 193
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV LI ESH+CYLG R + WG+GC +CPAC LR+ GW F
Sbjct: 194 DALVGLINRESHSCYLGTRGTLHPWGHGCGTCPACQLRKAGWERF 238
>gi|189039056|sp|A1VJX7|QUEC_POLNA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 239
Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 177/233 (75%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + SAL+LFSGGQDS+TCL+ AL +++RVET++FDYGQR+KVEL+ RL V +++
Sbjct: 5 VSRAHTSALVLFSGGQDSTTCLAQALAKYERVETIAFDYGQRHKVELQARLNVLRELKSQ 64
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P+W LGEDH+L LA+LG +S SLT++VA K++ + LPNTFVPGRN++FL AA LA
Sbjct: 65 FPQWAAKLGEDHLLDLAVLGQVSDCSLTRDVAFKMESSGLPNTFVPGRNLLFLTLAAALA 124
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V GVCETD+SGYPDCR DT++A++ A++LGM+ + TPLMW+ K +TW L
Sbjct: 125 YRRDLQVLVTGVCETDFSGYPDCRDDTMKAMQLALSLGMDKRFLIETPLMWIDKADTWAL 184
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A+ +GGQ LV LI+E +HTCYLG R R+ WGYGC CPAC LR +G+ + E
Sbjct: 185 AESLGGQPLVELIIEHTHTCYLGDRIHRHAWGYGCGQCPACELRARGYARYAE 237
>gi|121603547|ref|YP_980876.1| exsB protein [Polaromonas naphthalenivorans CJ2]
gi|120592516|gb|ABM35955.1| preQ(0) biosynthesis protein QueC [Polaromonas naphthalenivorans
CJ2]
Length = 241
Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 177/233 (75%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + SAL+LFSGGQDS+TCL+ AL +++RVET++FDYGQR+KVEL+ RL V +++
Sbjct: 7 VSRAHTSALVLFSGGQDSTTCLAQALAKYERVETIAFDYGQRHKVELQARLNVLRELKSQ 66
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P+W LGEDH+L LA+LG +S SLT++VA K++ + LPNTFVPGRN++FL AA LA
Sbjct: 67 FPQWAAKLGEDHLLDLAVLGQVSDCSLTRDVAFKMESSGLPNTFVPGRNLLFLTLAAALA 126
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V GVCETD+SGYPDCR DT++A++ A++LGM+ + TPLMW+ K +TW L
Sbjct: 127 YRRDLQVLVTGVCETDFSGYPDCRDDTMKAMQLALSLGMDKRFLIETPLMWIDKADTWAL 186
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A+ +GGQ LV LI+E +HTCYLG R R+ WGYGC CPAC LR +G+ + E
Sbjct: 187 AESLGGQPLVELIIEHTHTCYLGDRIHRHAWGYGCGQCPACELRARGYARYAE 239
>gi|237749231|ref|ZP_04579711.1| queuosine biosynthesis protein queC [Oxalobacter formigenes OXCC13]
gi|229380593|gb|EEO30684.1| queuosine biosynthesis protein queC [Oxalobacter formigenes OXCC13]
Length = 246
Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 122/233 (52%), Positives = 174/233 (74%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N I+ AL+LFSGGQDS+TCL+WAL+ +D+VET+ F YGQR+ VEL R + +KI
Sbjct: 7 NHSIESTKKALVLFSGGQDSTTCLAWALNHYDKVETIGFSYGQRHAVELTVRPGILQKIR 66
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+W LGEDH+ L+++ +S +++T +V +++ +N LPNTFVPGRN++FL+ AA
Sbjct: 67 NFSEEWNKKLGEDHVCDLSLISSLSETAMTSDVEIRMMENGLPNTFVPGRNLMFLMVAAM 126
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LAYR + +V G+CETD+SGYPDCR D I+A++ A+N+GM++ + + TPLMW K ETW
Sbjct: 127 LAYRRDLNVLVGGMCETDFSGYPDCRDDAIKAMQLALNIGMDARLNLVTPLMWKNKKETW 186
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+LA ++GGQ LV+LI+ E+HTCY+G+ DK WG+GC CPAC LR+KG+ EF
Sbjct: 187 QLAAELGGQGLVDLIVNETHTCYVGEHDKLNTWGFGCGECPACLLRKKGFEEF 239
>gi|218886226|ref|YP_002435547.1| exsB protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757180|gb|ACL08079.1| exsB protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 239
Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 166/225 (73%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL++ SGGQDS+TCL WAL+RF RV T+ F YGQR+ VE++CRL + ++ L W +
Sbjct: 6 TALVVLSGGQDSATCLGWALERFGRVSTIGFHYGQRHTVEMDCRLRLMDEVRRLSAGWNE 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+D + LA+ ++ ++LT +VA+++ N LP TFVPGRN++FL AA AYR GI
Sbjct: 66 RLGDDTTVELALFRELGSTALTHDVAIEMGRNGLPTTFVPGRNLVFLTAAAAHAYRQGIR 125
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+IGVCETDYSGYPDCR DTI+A++ A+NLGME+ +HTPLMWL K TW+LA+ +GG
Sbjct: 126 HIIIGVCETDYSGYPDCRDDTIKAMQVALNLGMETRFVLHTPLMWLTKGATWELARQVGG 185
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
V ++LE +HTCY G R R+ WGYGC CPAC LR+ GW ++
Sbjct: 186 DAFVEVVLEHTHTCYKGVRATRHPWGYGCGDCPACDLRRHGWADY 230
>gi|329912653|ref|ZP_08275781.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545570|gb|EGF30744.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium
IMCC9480]
Length = 235
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 120/228 (52%), Positives = 170/228 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGGQDS+TC++WAL R+ RVET+ FDYGQR+ +E+ R V + P W
Sbjct: 6 GALVLFSGGQDSTTCVAWALQRYARVETIGFDYGQRHAIEMTVRPDVLASLRTQSPDWDH 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH++ L+++G IS ++LT NV + + +N LPNTFVPGRN++F++ AATLAYR G+
Sbjct: 66 RLGEDHVIDLSLIGKISDTALTSNVEIAMLENGLPNTFVPGRNLLFMMVAATLAYRRGLD 125
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR DT++A++ +NLGM + + + TPLMW+ K TW LA+ +GG
Sbjct: 126 VLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATRLKLETPLMWIDKAATWALAESLGG 185
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV+LI +HTCYLG+R ++WGYGC +CPAC LR KG+ ++++
Sbjct: 186 DTLVDLIRTGTHTCYLGERGALHDWGYGCGTCPACALRAKGYAGYRQR 233
>gi|121998595|ref|YP_001003382.1| exsB protein [Halorhodospira halophila SL1]
gi|189038918|sp|A1WY18|QUEC_HALHL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|121590000|gb|ABM62580.1| preQ(0) biosynthesis protein QueC [Halorhodospira halophila SL1]
Length = 247
Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 161/226 (71%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+ CL+WAL+ F RVET+ F YGQR+ VEL R V + L P W
Sbjct: 16 SALVLFSGGQDSTACLAWALEYFSRVETVGFAYGQRHDVELSAREEVLDGLRALRPDWAA 75
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG D +L +LG+IS ++LT++ + LP TFVPGRN++F AA +A+R GI
Sbjct: 76 RLGSDRVLDAGVLGEISDTALTQDAEIAYDARGLPTTFVPGRNLLFFTLAAAVAHRRGIR 135
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V GVCETD+SGYPDCR DT+++++ +NLGM + +HTPLMWL K +TW LA+ +GG
Sbjct: 136 HLVAGVCETDFSGYPDCRDDTVKSLQVTLNLGMAERLVLHTPLMWLDKAQTWMLAEQLGG 195
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
LV+L +E SHTCY G R++R+EWGYGC CPAC LR +GW F+
Sbjct: 196 SALVDLTVEASHTCYYGMREQRHEWGYGCGECPACRLRAEGWHRFR 241
>gi|83859605|ref|ZP_00953125.1| hypothetical protein OA2633_06389 [Oceanicaulis alexandrii
HTCC2633]
gi|83851964|gb|EAP89818.1| hypothetical protein OA2633_06389 [Oceanicaulis alexandrii
HTCC2633]
Length = 239
Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 123/234 (52%), Positives = 175/234 (74%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D + +AL+LFSGGQDS+TCL+WAL RF+RVET+ FDYGQR++VEL+ R VR ++++
Sbjct: 2 DTRASSNAALVLFSGGQDSATCLAWALSRFERVETIGFDYGQRHEVELKARQRVRDEMLK 61
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
P W + LGED ++ L+ G ++ S+LT ++ + + + LP+TFVPGRN++FL AA L
Sbjct: 62 AFPAWAERLGEDRLVDLSGYGALAESALTADMEIVMTEQGLPSTFVPGRNLVFLTVAAAL 121
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AYR GI +V G+C+TDYSGYPDCR DTI+ A+ LG++ + TPLM L K +TW
Sbjct: 122 AYRRGIDVLVGGMCQTDYSGYPDCREDTIQTQARALGLGLDRPTVIETPLMHLDKAQTWL 181
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA ++GG+ LV+LI+E SHTCY G+R +R++WGYGC+ CPAC LR+ GW +++E
Sbjct: 182 LAHELGGEALVDLIVEHSHTCYRGERGQRHDWGYGCDDCPACDLRKAGWNKWRE 235
>gi|197106205|ref|YP_002131582.1| exsB protein [Phenylobacterium zucineum HLK1]
gi|196479625|gb|ACG79153.1| exsB protein [Phenylobacterium zucineum HLK1]
Length = 241
Score = 278 bits (710), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 162/225 (72%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDSS CL+WALDR+DRVET+ FDYGQR+ VEL+ R VR ++ P+W
Sbjct: 7 AALVLFSGGQDSSVCLAWALDRYDRVETVGFDYGQRHAVELQARQAVRSRLAAGFPRWAG 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH + + G I +++T+ A +I + LP+T+VPGRN+ FL +AA LA R GI
Sbjct: 67 RLGEDHFIEMRGFGAIGGTAMTQERAFEITEKGLPSTYVPGRNLAFLTYAAALADRRGIP 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETDYSGYPDCR D I A+E A+NLGM + TPLM L K +TW LA +GG
Sbjct: 127 VLVGGMCETDYSGYPDCRRDAIDAMERALNLGMAQDFRIETPLMRLTKAQTWGLASRLGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ LV+LI+ ESHTCY G+R + + WG+GC CPAC LR +GW E+
Sbjct: 187 EPLVDLIVRESHTCYRGERGELHAWGHGCGDCPACELRARGWEEW 231
>gi|319942229|ref|ZP_08016545.1| queuosine biosynthesis protein queC [Sutterella wadsworthensis
3_1_45B]
gi|319804282|gb|EFW01174.1| queuosine biosynthesis protein queC [Sutterella wadsworthensis
3_1_45B]
Length = 252
Score = 278 bits (710), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 169/232 (72%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + +AL+LFSGGQDS+TCL WAL+RF RVET+ DYGQR++ ELECR+ VR+K+ +L
Sbjct: 10 VGREMAALVLFSGGQDSTTCLGWALERFGRVETIGVDYGQRHQAELECRVRVREKMAQLK 69
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P+W + LG+DH+L L +LG+I+ +LT + + + LPNTFVPGRN++F AA+LAY
Sbjct: 70 PQWGERLGDDHLLKLPVLGEIADCALTDERRIAFEASGLPNTFVPGRNLLFFTLAASLAY 129
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +V G+CETDYSGYPDCR +T+++++ ++LG++ + TPLM L K ETW LA
Sbjct: 130 RRGLRVLVGGMCETDYSGYPDCRDNTLKSLQVTLDLGLDMPFIIETPLMRLSKAETWALA 189
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ +GG V L+ ++HTCY+G R+ WGYGC CPAC LR +GW + E
Sbjct: 190 EHVGGDPFVELVRNDTHTCYMGDHQHRHVWGYGCGECPACKLRAQGWASWSE 241
>gi|187476833|ref|YP_784857.1| hypothetical protein BAV0319 [Bordetella avium 197N]
gi|110816213|sp|Q2KZT1|QUEC_BORA1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|115421419|emb|CAJ47924.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 244
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/227 (55%), Positives = 174/227 (76%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WALDR+ VET++FDYGQR+++EL+ RL V ++I P W
Sbjct: 15 ALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHRIELDARLNVLREIRGRFPAWAAR 74
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH+L L +LG + +++T + A+++Q N LPNTFVPGRN++FL AA L YR +
Sbjct: 75 LGQDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALGYRRQLDV 134
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DT++A + A++LG+ S VT+ TPLMWL K +TW LA +GG+
Sbjct: 135 LVGGMCETDFSGYPDCRDDTMKAQQVALSLGLGSRVTIETPLMWLDKADTWALADSLGGE 194
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV I+EESHTCY+G+R +R++WGYGC CPAC LR+ GW + E+
Sbjct: 195 SLVQTIVEESHTCYVGERGQRHDWGYGCGECPACVLRKAGWSRWAER 241
>gi|237747077|ref|ZP_04577557.1| queuosine biosynthesis protein queC [Oxalobacter formigenes HOxBLS]
gi|229378428|gb|EEO28519.1| queuosine biosynthesis protein queC [Oxalobacter formigenes HOxBLS]
Length = 246
Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 176/233 (75%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + +AL+LFSGGQDS+TCL+WAL ++ VET+ F YGQR+ VELE R + +K+ +
Sbjct: 10 VTRDKNALVLFSGGQDSTTCLAWALTHYNHVETVGFSYGQRHAVELEGRPRILEKLRQFS 69
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
KW LG DHI+ L+++ +S +++T + +++ +N LPNTFVPGRN++FL AA LAY
Sbjct: 70 EKWNRRLGADHIVDLSLISHLSETAMTTEMEIRVMENGLPNTFVPGRNLMFLTAAAMLAY 129
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R + +V G+CETD+SGYPDCR D ++A++ A+N+GM++ + + TPLMW K ETW++A
Sbjct: 130 RRDLNTLVGGMCETDFSGYPDCRDDAVKALQVALNIGMDTRLALLTPLMWKNKKETWQMA 189
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D+GGQ L+ LI+ E+HTCY+G+ ++ +EWGYGC CPAC LR++G+ME++ +
Sbjct: 190 FDLGGQKLIELIVSETHTCYIGEHNRLHEWGYGCGKCPACLLRKRGFMEYQSE 242
>gi|114328780|ref|YP_745938.1| queuosine biosynthesis protein QueC [Granulibacter bethesdensis
CGDNIH1]
gi|122326267|sp|Q0BQ87|QUEC_GRABC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114316954|gb|ABI63014.1| queuosine biosynthesis protein QueC [Granulibacter bethesdensis
CGDNIH1]
Length = 252
Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 164/230 (71%), Gaps = 5/230 (2%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK---- 66
AL+LFSGGQDS+TCL+WAL+RF VET+ F YGQR+ VE+ECR VR+ + + +
Sbjct: 18 ALVLFSGGQDSTTCLAWALERFAHVETIGFTYGQRHSVEMECRGRVRQVLAHMSGRSGAD 77
Query: 67 WKDSLGEDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
W LG+DH+L L L + S+LT ++I LP +FVPGRN+IFL +AA L +R
Sbjct: 78 WGSRLGDDHVLDLGNALHHVGQSALTGRSPIEIGQGGLPTSFVPGRNLIFLTYAAALGWR 137
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+ +V G+CETDYSGYPDCR DTI+A++ A+N GME+H + TPLMWL K ETW LA
Sbjct: 138 RGLRRMVGGMCETDYSGYPDCRDDTIKAMQLALNTGMEAHFVLETPLMWLTKAETWALAD 197
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+GG LV LI EE+HTCYLG R +R+ WGYGC CPAC LR +GW E++
Sbjct: 198 SLGGPALVALIEEETHTCYLGDRSQRHPWGYGCGECPACSLRAEGWREWQ 247
>gi|317401137|gb|EFV81788.1| queuosine biosynthesis protein queC [Achromobacter xylosoxidans
C54]
Length = 237
Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/227 (56%), Positives = 172/227 (75%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WALDR+ VET++FDYGQR+++EL+ RL V + I P+W
Sbjct: 8 ALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHRIELDARLNVLRDIRARFPQWAPR 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LGEDH+L L +LG + +++T + A+++Q N LPNTFVPGRN++FL AA L YR +
Sbjct: 68 LGEDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALGYRRQLDV 127
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DTI+A + A+ LG+ S VT+ TPLMW+ K ETW LA+ +GG
Sbjct: 128 LVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGSRVTIETPLMWIDKSETWALARSLGGD 187
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV I+EESHTCYLG+R R+ WGYGC CPAC LR+ GW +++ +
Sbjct: 188 ALVETIVEESHTCYLGERGARHAWGYGCGECPACKLRRAGWDKWQAQ 234
>gi|312113884|ref|YP_004011480.1| exsB protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219013|gb|ADP70381.1| exsB protein [Rhodomicrobium vannielii ATCC 17100]
Length = 242
Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 164/236 (69%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + A +L+L SGGQDS+ CL+WAL + +VETL F YGQR+ VELECR +R+ +
Sbjct: 1 MTGTPESATKSLVLLSGGQDSAVCLAWALTNYAQVETLGFSYGQRHSVELECRPKLREAL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L P+W LG DH+L L+ILG +S ++LT + + N LPNTFVPGRN++F AA
Sbjct: 61 AALSPEWAARLGPDHVLDLSILGAVSDTALTSDAEIAFGANGLPNTFVPGRNLLFFTLAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
L YR GI ++V G+C+TDYSGYPDCR +T++ + +AINLG + + TPLMW K ET
Sbjct: 121 ALGYRRGIRDLVGGMCQTDYSGYPDCRDETLQTLASAINLGTDEQFRIVTPLMWRTKAET 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
W + +GG LV+++ E SHTCY G RD R+EWGYGC +CPAC LR KG+ +++
Sbjct: 181 WAMTHALGGNPLVDIVAEHSHTCYKGVRDHRHEWGYGCGACPACDLRAKGYKAWRD 236
>gi|241764890|ref|ZP_04762892.1| exsB protein [Acidovorax delafieldii 2AN]
gi|241365549|gb|EER60291.1| exsB protein [Acidovorax delafieldii 2AN]
Length = 234
Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 166/225 (73%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WAL F+ VET+ FDYGQR++VEL+ R V + P+W++
Sbjct: 6 ALVLFSGGQDSTTCLAWALAHFEHVETIGFDYGQRHQVELQARQQVLTALRTAFPQWRER 65
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH++ LA+LG IS ++LT+ + + LPNTFVPGRN++F AA + YR G+
Sbjct: 66 LGDDHMIDLAVLGQISDTALTRETEIVMDAAGLPNTFVPGRNLLFFQLAAAVGYRRGLHT 125
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DT++A++ A++LGM T TPLMWL K TW++A +GG
Sbjct: 126 LVGGMCETDFSGYPDCRDDTLKALQVAVSLGMGQRFTFETPLMWLDKAATWEMAHTLGGP 185
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
LV++ILE+SHTCY G R+ R+ WGYGC +CPAC LR+ G+ ++
Sbjct: 186 ALVDIILEQSHTCYHGVREVRHAWGYGCGTCPACALRKAGYERWQ 230
>gi|20804095|emb|CAD31298.1| CONSERVED HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A]
Length = 245
Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 169/226 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL+ F+RVET+ FDYGQR+++EL+ R + +I P W+
Sbjct: 7 TALVLFSGGQDSTTCLAWALENFERVETIGFDYGQRHRIELDVRPYLLGRIRTDFPAWRG 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH++ +A+LG IS ++LT++V + + N L NTFVPGRN++FL FAA +AYR+G
Sbjct: 67 RLGEDHMIDMAVLGQISDTALTRDVEVALNANGLTNTFVPGRNLLFLGFAAAIAYRMGAK 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++VIGV ETD YPDCR D ++A++ A+NLGME+H+ +HTPLM K +TW LA +GG
Sbjct: 127 HLVIGVSETDRFSYPDCRDDAVKAMQLALNLGMETHLVIHTPLMRRDKAQTWALAGWLGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ LV LI E SHTCY G R+ R+ WG+GC +C C LR GW +F+
Sbjct: 187 EVLVKLICEGSHTCYSGDREHRHSWGFGCGTCIECNLRAAGWEQFR 232
>gi|149926202|ref|ZP_01914464.1| exsB protein [Limnobacter sp. MED105]
gi|149825020|gb|EDM84232.1| exsB protein [Limnobacter sp. MED105]
Length = 234
Score = 274 bits (701), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 168/224 (75%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+ CL+WAL +F+ VET+ FDYGQR+++ELECRL V ++ E P+W
Sbjct: 5 ALVLFSGGQDSTVCLAWALSKFEHVETIGFDYGQRHRIELECRLTVLDRVREQFPEWAYK 64
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LGED ++ L+ LG IS +LT+ +++ +N LPNTFVPGRN++F + ++ +AYR G++
Sbjct: 65 LGEDRVIDLSWLGQISDCALTEEREIELNENGLPNTFVPGRNLVFFLISSAVAYRRGLST 124
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+C+TD+SGYPDCR DT++A++ A NLGM S TPLMW+ K ET++L + +GG+
Sbjct: 125 LVGGMCQTDFSGYPDCREDTLKALQVATNLGMASTFRFETPLMWIDKMETFQLGEQLGGK 184
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L+ +I+ ++HTCY G R ++WG+GC CPAC LR++GW +
Sbjct: 185 KLLEIIVRDTHTCYTGDRSHEHDWGFGCGECPACDLRKRGWKNY 228
>gi|209885226|ref|YP_002289083.1| ExsB protein [Oligotropha carboxidovorans OM5]
gi|209873422|gb|ACI93218.1| ExsB protein [Oligotropha carboxidovorans OM5]
Length = 239
Score = 274 bits (700), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 173/237 (72%), Gaps = 2/237 (0%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
MN+ + K +AL+LFSGGQDS+TCL+W L RF RVET+ FDYGQR+ +ELECR + +
Sbjct: 1 MNNPLDKPLDDAALVLFSGGQDSATCLAWVLSRFARVETVGFDYGQRHAIELECRSTLIE 60
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ + P+WK LGE H L + L +IS ++LT+++A+++ LPNTFVPGRN++FL
Sbjct: 61 RFKAIKPEWKARLGEAHTLAIPTLAEISDTALTRDIAIEMDKGGLPNTFVPGRNLLFLTL 120
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA L YR GI +IV G+CETDYSGYPDCR +TI+++ AIN GM +HTPLMW K
Sbjct: 121 AAALGYRRGIRHIVGGMCETDYSGYPDCRDETIKSLNVAINQGMGRDFELHTPLMWRDKG 180
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
ETW LA ++GG LV+LI++ SHTCYLG+R ++WGYGC CPAC LR GW ++K
Sbjct: 181 ETWALAHELGGDALVDLIVQHSHTCYLGERGALHDWGYGCGECPACRLRAAGWAKYK 237
>gi|13474943|ref|NP_106513.1| hypothetical protein mll5936 [Mesorhizobium loti MAFF303099]
gi|81777876|sp|Q98AM3|QUEC2_RHILO RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
gi|14025699|dbj|BAB52299.1| mll5936 [Mesorhizobium loti MAFF303099]
Length = 245
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 165/226 (73%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL+ F+RVET+ FDYGQR+++EL+ R + ++I P W+
Sbjct: 7 TALVLFSGGQDSTTCLAWALENFERVETIGFDYGQRHRIELDVRPYLLERIRTDFPAWRG 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG DH++ +A+LG IS ++LT+ V + + N LPNTFVPGRN++FL FAA LAYRL
Sbjct: 67 RLGGDHMIDMAVLGQISDTALTRGVEVALNANGLPNTFVPGRNLLFLGFAAALAYRLSAK 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++VIGV ETD YPDCR D ++AI+ A+NLGME +HTPLM K +TW LA +GG
Sbjct: 127 HLVIGVAETDRFSYPDCRDDAVKAIQLALNLGMEKRFIIHTPLMHRDKAQTWALADWLGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ LV LI E SHTCY G R+ R+ WG+GC +C C LR GW +F+
Sbjct: 187 EALVKLICEGSHTCYSGDREHRHSWGFGCGTCIECNLRAAGWEQFR 232
>gi|220904355|ref|YP_002479667.1| exsB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219868654|gb|ACL48989.1| exsB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 258
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 169/225 (75%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL++FSGGQDS+TCL+WALDRF RV TL FDYGQR+ VEL CR +R+K+ L P+W
Sbjct: 18 TALVIFSGGQDSATCLAWALDRFARVRTLGFDYGQRHAVELACRQNLREKLATLNPQWAA 77
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L D +L + + +++++LT ++ + LPNTFVPGRN+IF++ AA AY L I
Sbjct: 78 RLDADCLLDIGLFRQLANTALTSTSPIEDKPEGLPNTFVPGRNLIFILHAAAWAYGLDIR 137
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V+GVC++D SGYPDCR D+I+A++ A+N+GM+++ +HTPLMW K + W LA+ +GG
Sbjct: 138 HMVLGVCQSDSSGYPDCRDDSIKAMQVALNVGMDANFVLHTPLMWRSKKDAWTLAEVLGG 197
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+LV+LI+EESHTCY G+R +R+ WGYGC CPAC LR G+ E+
Sbjct: 198 ANLVDLIVEESHTCYEGQRGQRHPWGYGCGQCPACRLRAAGYTEY 242
>gi|317486303|ref|ZP_07945135.1| ExsB protein [Bilophila wadsworthia 3_1_6]
gi|316922473|gb|EFV43727.1| ExsB protein [Bilophila wadsworthia 3_1_6]
Length = 239
Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI---VELMPK 66
SAL++FSGGQDS+TCL WAL+RFDRV T+ FDYGQR+ VE+ECR V + L
Sbjct: 8 SALVIFSGGQDSATCLGWALNRFDRVFTVGFDYGQRHHVEMECRRNVLNAVRSDASLPAS 67
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LGED +L L + I +++T ++ + + +PNTFVPGRN++FL AA LA+R
Sbjct: 68 WAARLGEDTLLSLGLFNQIGETAMTSDMEIAFNEQGIPNTFVPGRNLVFLTAAAALAWRK 127
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI ++V+GVCETD+SGYPDCR DT++A++ A+NLGM++ VHTPLMWL K TW LA+
Sbjct: 128 GIRHLVMGVCETDFSGYPDCRDDTVKAMQVALNLGMDARFVVHTPLMWLDKARTWTLAEQ 187
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG V + +HTCY+G R + + WGYGC CPAC LR+ GW E+ E
Sbjct: 188 EGGAPFVECVRTVTHTCYIGDRGELHPWGYGCGQCPACKLREHGWKEYSE 237
>gi|319762211|ref|YP_004126148.1| exsb protein [Alicycliphilus denitrificans BC]
gi|317116772|gb|ADU99260.1| exsB protein [Alicycliphilus denitrificans BC]
Length = 239
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 121/227 (53%), Positives = 168/227 (74%), Gaps = 2/227 (0%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+L SGGQDS+TCL+WAL R+ VET+ FDYGQR++ EL+CR +R + + MP W
Sbjct: 9 ALVLLSGGQDSATCLAWALARYAHVETIGFDYGQRHRAELDCRQRLRAGL-QAMP-WSGR 66
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG DH+L + +L + S++T+ VA+ +Q + LPNTFVPGRN++F AA LAYR G+
Sbjct: 67 LGPDHLLTVDVLAQLGGSAMTEEVAIAMQQDGLPNTFVPGRNLLFFTLAAALAYRRGLQV 126
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+ ETDYSGYPDCR +T++A++ A++LG++ +T+ TPLMW+ K TW LA +GG
Sbjct: 127 LVGGMSETDYSGYPDCRDNTLKALQVALSLGLDRPLTLETPLMWIDKAGTWALAHQLGGD 186
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV LI +SHTCYLG+RD+ ++WGYGC CPAC LR +GW ++ EK
Sbjct: 187 ALVELIRRDSHTCYLGQRDRLHDWGYGCGRCPACELRAQGWAQWAEK 233
>gi|114569268|ref|YP_755948.1| exsB protein [Maricaulis maris MCS10]
gi|122316597|sp|Q0ARS7|QUEC_MARMM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114339730|gb|ABI65010.1| preQ(0) biosynthesis protein QueC [Maricaulis maris MCS10]
Length = 243
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 160/221 (72%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL R+ RVET+ FDYGQR+ VE+ R VR + P W D
Sbjct: 13 TALVLFSGGQDSATCLAWALQRYARVETVGFDYGQRHHVEMTARERVRSGLAASFPHWGD 72
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGED ++ LA G I+ S+LT + A+++Q N LP+TFVPGRN++FL A+ LAYR G
Sbjct: 73 RLGEDFVIDLAGYGAIADSALTADRAIEMQANGLPSTFVPGRNLVFLTVASALAYRRGHG 132
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR +TI A++TA+ LG+E V + TPLM L K TW LA +GG
Sbjct: 133 VLVGGMCETDFSGYPDCRRNTIDAMQTALGLGLEMAVEIATPLMHLDKAATWALAHQLGG 192
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
L+ LI E+SHTCY G+R KR+ WGYGC CPAC LR G
Sbjct: 193 DALIGLIEEDSHTCYRGERGKRHAWGYGCGDCPACELRANG 233
>gi|300023283|ref|YP_003755894.1| exsB protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525104|gb|ADJ23573.1| exsB protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 232
Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 167/228 (73%), Gaps = 2/228 (0%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+ CL+WALDR++RVET+ F YGQR+ VEL R +R K+ L K
Sbjct: 5 SALVLFSGGQDSTVCLAWALDRYERVETVGFTYGQRHAVELAQRPVIRSKLANLSGGSK- 63
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+D +L L L IS ++LT+ + LP TFVPGRN++FL +AA LAYR GI
Sbjct: 64 -LGDDAVLDLPALQSISDTALTRETEITFAATGLPTTFVPGRNLLFLTYAAALAYRRGIG 122
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR+ T++A+ A++LG+++H+ + TPLM++ K TW LA +GG
Sbjct: 123 TLVGGMCETDFSGYPDCRNATVQALAQALSLGLDTHLEIETPLMFIDKAATWDLADKLGG 182
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LV+LI+E++HTCYLG R R+ WGYGC +CPAC LR KGW E++ +
Sbjct: 183 KALVDLIVEDTHTCYLGDRSHRHAWGYGCGTCPACELRAKGWNEWQAR 230
>gi|293602126|ref|ZP_06684578.1| transcription regulator ExsB [Achromobacter piechaudii ATCC 43553]
gi|292819462|gb|EFF78491.1| transcription regulator ExsB [Achromobacter piechaudii ATCC 43553]
Length = 239
Score = 271 bits (692), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 128/224 (57%), Positives = 167/224 (74%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WALDR+ VET++FDYGQR+ +EL RL V + I P W
Sbjct: 8 ALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHHIELSARLNVLRDIRANFPDWAPR 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LGEDH+L L +LG + +++T + A+++Q N LPNTFVPGRN++FL AA L YR +
Sbjct: 68 LGEDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALGYRRQLDV 127
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DTI+A + A+ LG+ S VT+ TPLMW+ K ETW LA +GG
Sbjct: 128 LVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGSRVTIETPLMWIDKSETWALAYQLGGD 187
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV I+EESHTCYLG+R R++WGYGC CPAC LR+ GW ++
Sbjct: 188 ALVETIVEESHTCYLGERGARHDWGYGCGECPACKLRKIGWEKW 231
>gi|330825968|ref|YP_004389271.1| exsB protein [Alicycliphilus denitrificans K601]
gi|329311340|gb|AEB85755.1| exsB protein [Alicycliphilus denitrificans K601]
Length = 239
Score = 271 bits (692), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 120/227 (52%), Positives = 167/227 (73%), Gaps = 2/227 (0%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+L SGGQDS+TCL+WAL R+ VET+ FDYGQR++ EL+CR +R + + MP W
Sbjct: 9 ALVLLSGGQDSATCLAWALARYAHVETIGFDYGQRHRAELDCRQRLRAGL-QAMP-WSGR 66
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG DH+L + +L + S++T+ VA+ +Q + LPNTFVPGRN++F AA LAYR G+
Sbjct: 67 LGPDHLLTVDVLAQLGGSAMTEEVAIAMQQDGLPNTFVPGRNLLFFTLAAALAYRRGLQV 126
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+ ETDYSGYPDCR +T++A++ A++LG++ +T+ TPLMW+ K TW LA +GG
Sbjct: 127 LVGGMSETDYSGYPDCRDNTLKALQVALSLGLDRPLTLETPLMWIDKAGTWALAHQLGGD 186
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
L LI +SHTCYLG+RD+ ++WGYGC CPAC LR +GW ++ EK
Sbjct: 187 ALAELIRRDSHTCYLGQRDRLHDWGYGCGRCPACELRAQGWAQWAEK 233
>gi|311109100|ref|YP_003981953.1| queuosine biosynthesis protein QueC [Achromobacter xylosoxidans A8]
gi|310763789|gb|ADP19238.1| queuosine biosynthesis protein QueC [Achromobacter xylosoxidans A8]
Length = 239
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/224 (56%), Positives = 167/224 (74%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WAL+R+ VET++FDYGQR+ +EL RL V + I P W
Sbjct: 8 ALVLFSGGQDSTTCLAWALERYAHVETVAFDYGQRHHIELSARLNVLRDIRNNFPDWAPR 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LGEDH+L L +LG + +++T + A+++Q N LPNTFVPGRN++FL AA L YR +
Sbjct: 68 LGEDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALGYRRQLDV 127
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DTI+A + A+ LG+ S VT+ TPLMW+ K ETW LA +GG
Sbjct: 128 LVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGSRVTIETPLMWIDKSETWALAHQLGGD 187
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV I+EESHTCYLG+R R++WGYGC CPAC LR+ GW ++
Sbjct: 188 ALVETIVEESHTCYLGERGARHDWGYGCGECPACKLRKIGWEKW 231
>gi|121611883|ref|YP_999690.1| exsB protein [Verminephrobacter eiseniae EF01-2]
gi|189029332|sp|A1WSR5|QUEC_VEREI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|121556523|gb|ABM60672.1| exsB protein [Verminephrobacter eiseniae EF01-2]
Length = 237
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 118/231 (51%), Positives = 167/231 (72%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A AL+LFSGGQDS+TCL+WAL +F VET+ FDYGQR+ VEL+ R V I +
Sbjct: 2 RAGHALVLFSGGQDSTTCLAWALTQFAHVETIGFDYGQRHHVELQARQTVLAAIRSRFAQ 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W++ LG DH++ L++LG IS ++LT++ A+++ LPNTFVPGRN++F AA + YR
Sbjct: 62 WRERLGADHMIDLSVLGRISDTALTRDSAIQLSAAGLPNTFVPGRNLLFFNLAAAVGYRR 121
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +V G+CETD+SGYPDCR D+++A++ A++LG+ T TPLMWL K TW+LA+
Sbjct: 122 GLHTLVGGMCETDFSGYPDCRDDSLKALQVAVSLGLGQRFTFETPLMWLDKAATWELARS 181
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+GGQ LV LI+ +SHTCY G R + WG+GC +CPAC LRQ G+ ++ +
Sbjct: 182 LGGQALVELIVRDSHTCYHGVRGVLHAWGHGCGTCPACVLRQTGYDRWQAR 232
>gi|154253587|ref|YP_001414411.1| exsB protein [Parvibaculum lavamentivorans DS-1]
gi|189038931|sp|A7HXX1|QUEC_PARL1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|154157537|gb|ABS64754.1| exsB protein [Parvibaculum lavamentivorans DS-1]
Length = 236
Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 161/224 (71%), Gaps = 1/224 (0%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+ CL+ L R+D VET+ FDYGQ + VEL CR +R + P W
Sbjct: 9 ALVLFSGGQDSTVCLASVLARYDEVETVGFDYGQAHAVELGCRAKLRDALTRF-PGWGAK 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG DH++ L LG IS ++LT++V +++ +N LP TFVPGRN++F +AA L YR G +
Sbjct: 68 LGPDHMIALPELGRISETALTRDVEIEMGENGLPTTFVPGRNLLFFTYAAALGYRRGASV 127
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
IV G+CETDYSGYPDCR DTI A+E AI LGM+ T+ TPLM + K TW LA ++GG
Sbjct: 128 IVGGMCETDYSGYPDCRADTIAALERAICLGMDRAFTLETPLMRIDKAATWALAHELGGD 187
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV+LI+EE+H+CY G R KR++WGYGC +CPAC LR +G+ +
Sbjct: 188 ALVDLIIEETHSCYRGDRSKRHDWGYGCGTCPACELRARGYTAY 231
>gi|303327392|ref|ZP_07357833.1| ExsB protein [Desulfovibrio sp. 3_1_syn3]
gi|302862332|gb|EFL85265.1| ExsB protein [Desulfovibrio sp. 3_1_syn3]
Length = 252
Score = 268 bits (685), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 119/231 (51%), Positives = 163/231 (70%), Gaps = 1/231 (0%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL+W L RF+RV TL FDYGQR+ VEL CR +R + EL P W
Sbjct: 14 ALVIFSGGQDSATCLAWTLSRFERVRTLGFDYGQRHNVELACRQRLRAALAELDPLWASR 73
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG D +L + I ++ ++LT + LP TFVPGRN++F++ AA AY I
Sbjct: 74 LGPDTLLNVDIFRQLADTALTSEAPIAADGPGGLPTTFVPGRNLLFILHAAVWAYAKNIR 133
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++++GVC++D SGYPDCR D+I+A++ A+N GM+S +HTPLMWL K W+LA+ +GG
Sbjct: 134 HLILGVCQSDSSGYPDCRDDSIKAMQVALNCGMDSRFVLHTPLMWLSKRGAWELAESLGG 193
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LV+LILEESHTCY G+R +RY+WGYGC CPAC LR G+ ++E ++
Sbjct: 194 TALVDLILEESHTCYAGERGRRYDWGYGCGVCPACRLRASGYAAYREARKN 244
>gi|315499627|ref|YP_004088430.1| exsb protein [Asticcacaulis excentricus CB 48]
gi|315417639|gb|ADU14279.1| exsB protein [Asticcacaulis excentricus CB 48]
Length = 241
Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 169/228 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+ CL+WAL F+RVET+ FDYGQR+ +E+ R V ++ E+ +
Sbjct: 14 SALVLFSGGQDSTACLAWALTHFERVETIGFDYGQRHAIEMTTRARVLERFPEVFELART 73
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+DH++ L G ++ SSLT+ +++ + LPN+FVPGRN++F V+AA +A R GI
Sbjct: 74 RLGDDHVVDLKGFGRVAESSLTREQEIRMGERGLPNSFVPGRNLVFFVYAAAVADRRGID 133
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V G+CETD+SGYPDCR DT+ A++T +NLG+E + PLM+L K ETW L +GG
Sbjct: 134 HLVGGMCETDFSGYPDCRKDTLEAMQTVLNLGIERPYRIDAPLMFLTKAETWALTHQLGG 193
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV+L+LE++HTCY+G+R +R+EWGYGC +CPAC LR +G+ +++ +
Sbjct: 194 DALVDLVLEDTHTCYMGERGQRHEWGYGCGTCPACELRARGFEQWRNR 241
>gi|33591458|ref|NP_879102.1| hypothetical protein BP0214 [Bordetella pertussis Tohama I]
gi|33571100|emb|CAE40594.1| Conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332380859|gb|AEE65706.1| hypothetical protein BPTD_0212 [Bordetella pertussis CS]
Length = 239
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 167/221 (75%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WAL+R+ VETL FDYGQR++VEL+ R V +++ P W
Sbjct: 8 ALVLFSGGQDSTTCLAWALERYAHVETLGFDYGQRHRVELDARQVVLRELRANFPDWAQR 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH+L L IL + +++T + +++Q N LPNTFVPGRN++FL AA L YR +
Sbjct: 68 LGDDHLLDLGILAQVGDTAMTSDREIEMQANGLPNTFVPGRNLLFLTLAAALGYRRQLDV 127
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DTI++ + + LG+ + VT+ TPLMWL K +TW+LA +GGQ
Sbjct: 128 LVGGMCETDFSGYPDCRDDTIKSQQVTLGLGLGTRVTIETPLMWLDKAQTWELADRLGGQ 187
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
LV++++E SHTCYLG+R +R++WGYGC CPAC LR+ GW
Sbjct: 188 ALVDMVIEHSHTCYLGERGQRHDWGYGCGHCPACALRKNGW 228
>gi|33599410|ref|NP_886970.1| hypothetical protein BB0421 [Bordetella bronchiseptica RB50]
gi|81432318|sp|Q7WQB2|QUEC_BORBR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816214|sp|Q7W0D1|QUEC_BORPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33567006|emb|CAE30919.1| Conserved hypothetical protein [Bordetella bronchiseptica RB50]
Length = 244
Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 167/221 (75%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WAL+R+ VETL FDYGQR++VEL+ R V +++ P W
Sbjct: 13 ALVLFSGGQDSTTCLAWALERYAHVETLGFDYGQRHRVELDARQVVLRELRANFPDWAQR 72
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH+L L IL + +++T + +++Q N LPNTFVPGRN++FL AA L YR +
Sbjct: 73 LGDDHLLDLGILAQVGDTAMTSDREIEMQANGLPNTFVPGRNLLFLTLAAALGYRRQLDV 132
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DTI++ + + LG+ + VT+ TPLMWL K +TW+LA +GGQ
Sbjct: 133 LVGGMCETDFSGYPDCRDDTIKSQQVTLGLGLGTRVTIETPLMWLDKAQTWELADRLGGQ 192
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
LV++++E SHTCYLG+R +R++WGYGC CPAC LR+ GW
Sbjct: 193 ALVDMVIEHSHTCYLGERGQRHDWGYGCGHCPACALRKNGW 233
>gi|33595128|ref|NP_882771.1| hypothetical protein BPP0419 [Bordetella parapertussis 12822]
gi|81429782|sp|Q7WCA8|QUEC_BORPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33565205|emb|CAE36003.1| Conserved hypothetical protein [Bordetella parapertussis]
Length = 244
Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 167/221 (75%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WAL+R+ VETL FDYGQR++VEL+ R V +++ P W
Sbjct: 13 ALVLFSGGQDSTTCLAWALERYAHVETLGFDYGQRHRVELDARQVVLRELRANFPDWAQR 72
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH+L L IL + +++T + +++Q N LPNTFVPGRN++FL AA L YR +
Sbjct: 73 LGDDHLLDLGILAQVGDTAMTSDREIEMQANGLPNTFVPGRNLLFLTLAAALGYRRQLDV 132
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DTI++ + + LG+ + VT+ TPLMWL K +TW+LA +GGQ
Sbjct: 133 LVGGMCETDFSGYPDCRDDTIKSQQVTLGLGLGTRVTIETPLMWLDKAQTWELADRLGGQ 192
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
LV++++E SHTCYLG+R +R++WGYGC CPAC LR+ GW
Sbjct: 193 ALVDMVIEHSHTCYLGERGQRHDWGYGCGHCPACALRKNGW 233
>gi|94987242|ref|YP_595175.1| hypothetical protein LI0800 [Lawsonia intracellularis PHE/MN1-00]
gi|118574286|sp|Q1MQ73|QUEC_LAWIP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|94731491|emb|CAJ54854.1| Conserved hypothetical protein [Lawsonia intracellularis
PHE/MN1-00]
Length = 238
Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 154/227 (67%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
ALLLFSGGQDS TCL WAL F + T+ F YGQR+ VE++CR +R KI +L W+
Sbjct: 8 ALLLFSGGQDSGTCLGWALSNFSHIITIGFSYGQRHSVEMQCRTNIRNKISKLSKIWEQR 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LGED+I L I + +++T + + LPNTFVPGRNI FL AA A+R I +
Sbjct: 68 LGEDYIFSLDIFSQLGETAITSELEIVFDKQGLPNTFVPGRNIFFLTIAAAFAWRNSIRH 127
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
++IG CETD+SGYPDC+ ++I+A + A++LG+ +T+HTPLMWL K +TW+LA +GG
Sbjct: 128 LIIGTCETDFSGYPDCQDNSIKATQLALSLGLGEDITIHTPLMWLTKAQTWELALHLGGS 187
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
V+LI E+H+CYL +EWGYGC +CPAC LR+ GW F K
Sbjct: 188 KFVDLIRNETHSCYLNDHTTSHEWGYGCGTCPACKLRKNGWETFLMK 234
>gi|121595065|ref|YP_986961.1| exsB protein [Acidovorax sp. JS42]
gi|222111408|ref|YP_002553672.1| exsb protein [Acidovorax ebreus TPSY]
gi|189038887|sp|A1W9G0|QUEC_ACISJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764333|sp|B9MBJ3|QUEC_ACIET RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|120607145|gb|ABM42885.1| preQ(0) biosynthesis protein QueC [Acidovorax sp. JS42]
gi|221730852|gb|ACM33672.1| exsB protein [Acidovorax ebreus TPSY]
Length = 239
Score = 261 bits (666), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 162/227 (71%), Gaps = 2/227 (0%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+L SGGQDS+TCL+WAL R+ VETL FDYGQR++VEL+CR + + L W
Sbjct: 9 ALVLLSGGQDSATCLAWALARYGHVETLGFDYGQRHRVELDCRQRLIDGVRAL--PWPGQ 66
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG DH+L + +L + S++T +VA+ +Q + LPNTFVPGRN++F AA LAYR G+
Sbjct: 67 LGPDHMLTVDVLAQLGGSAMTDDVAIAMQADGLPNTFVPGRNLLFFTLAAALAYRRGLDV 126
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+ ETDYSGYPDCR T++A++ A++LG++ +T+ TPLMW K +TW LAQ +GG
Sbjct: 127 LVGGMSETDYSGYPDCRDSTLKALQVALSLGVDRPLTLETPLMWRSKADTWALAQRLGGD 186
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV LI ESHTCYLG+R + WG+GC CPAC LR +GW ++ +
Sbjct: 187 ALVELIRCESHTCYLGQRGDLHAWGHGCGGCPACELRAQGWEQWTAQ 233
>gi|326404567|ref|YP_004284649.1| 7-cyano-7-deazaguanine synthase [Acidiphilium multivorum AIU301]
gi|325051429|dbj|BAJ81767.1| 7-cyano-7-deazaguanine synthase [Acidiphilium multivorum AIU301]
Length = 246
Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 164/232 (70%), Gaps = 2/232 (0%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS TCL+WALDR+DRVET+ F YGQR+ VELECR +R I L P W+
Sbjct: 11 AALVLFSGGQDSGTCLAWALDRYDRVETIGFFYGQRHAVELECRAPLRAAIAGLRP-WRA 69
Query: 70 SLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+LG D +L ++ ++ +T + ++ + LPNTFVPGRN++FL +AA LAYR GI
Sbjct: 70 TLGADTMLDISAALATLGATAMTAEIEIETTEAGLPNTFVPGRNLLFLTYAAALAYRRGI 129
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+V G+CETDYSGYPDCR+ T++A++ A++LG++ VTV TPLM+ K TW+LA ++G
Sbjct: 130 GTLVGGMCETDYSGYPDCRNTTMQAMQLALSLGLDRAVTVETPLMYRDKAATWELAAELG 189
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
G LV + SH+CY G+R ++WGYGC +CPAC LR GW ++ D
Sbjct: 190 GAALVEALRTGSHSCYRGERATLHDWGYGCGTCPACELRAAGWQRWRAARAD 241
>gi|304320028|ref|YP_003853671.1| hypothetical protein PB2503_02262 [Parvularcula bermudensis
HTCC2503]
gi|303298931|gb|ADM08530.1| hypothetical protein PB2503_02262 [Parvularcula bermudensis
HTCC2503]
Length = 243
Score = 258 bits (658), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 118/228 (51%), Positives = 165/228 (72%), Gaps = 2/228 (0%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+L SGGQDS+TCL+WAL R+ VETL FDYGQR++VEL+ R VR + P+
Sbjct: 17 GALVLLSGGQDSATCLAWALGRYRVVETLGFDYGQRHRVELDARERVRAWWAD-RPE-GG 74
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+LG DH LP+ G+I +++T V +++ N LP TFVPGRN+ FLVFA LA R G++
Sbjct: 75 ALGADHRLPVPAFGEIGDTAMTAEVEIEMAANGLPTTFVPGRNLAFLVFAGALALRRGLS 134
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+C+TD +GYPDCR +TI+A A++LG++ ++V TPLM+ K ETW LAQ++GG
Sbjct: 135 VVVGGMCQTDAAGYPDCRWETIKAQADALSLGIDPSLSVATPLMFRSKAETWALAQELGG 194
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
DLV++I+E++HTCY G R+ R+ WGYGC CPAC+ R +GW ++E
Sbjct: 195 DDLVSMIVEDTHTCYRGDREHRHPWGYGCGDCPACHERARGWATWQES 242
>gi|306831583|ref|ZP_07464741.1| transcription regulator ExsB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426368|gb|EFM29482.1| transcription regulator ExsB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 242
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 155/231 (67%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL +D VET++F+YGQR+ +E+E V K I
Sbjct: 29 KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIE----VAKHIA----- 79
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++A++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 80 -AEQGVKNHLLDMSLLGQLTENALTRDIAIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 138
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 139 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADQ 198
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G D V E + TCY G + G GC CPAC LRQ G ++ K
Sbjct: 199 LGKFDYVR---ENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 240
>gi|171778271|ref|ZP_02919477.1| hypothetical protein STRINF_00319 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282971|gb|EDT48395.1| hypothetical protein STRINF_00319 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 216
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/228 (46%), Positives = 154/228 (67%), Gaps = 19/228 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL+ ++ VET++F+YGQR+ +E+E V K I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALEHYEHVETVTFNYGQRHSLEIE----VAKHIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 53 -AEQGVKNHLLDMSLLGQLTENALTRDIEIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M + +HTPLMWL K ETW+LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMNYNFVIHTPLMWLDKSETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D V E + TCY G + G GC CPAC LRQ G ++
Sbjct: 172 LGKFDYVR---ENTFTCYNGIK------GSGCGECPACKLRQAGLEKY 210
>gi|288905499|ref|YP_003430721.1| ExsB like protein [Streptococcus gallolyticus UCN34]
gi|288732225|emb|CBI13790.1| ExsB like protein [Streptococcus gallolyticus UCN34]
Length = 217
Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 154/231 (66%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL +D VET++F+YGQR+ +E+E V K I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIE----VAKHIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 53 -AEQGVKNHLLDMSLLGQLTENALTRDIVIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELANQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G D V E + TCY G + G GC CPAC LRQ G ++ K
Sbjct: 172 LGKFDYVR---ENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 213
>gi|325978489|ref|YP_004288205.1| queuosine biosynthesis protein queC [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325178417|emb|CBZ48461.1| queuosine biosynthesis protein queC [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 215
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 154/231 (66%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL +D VET++F+YGQR+ +E+E V K I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIE----VAKHIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 53 -AEQGVKNHLLDMSLLGQLTENALTRDIVIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G D V E + TCY G + G GC CPAC LRQ G ++ K
Sbjct: 172 LGKFDYVR---ENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 213
>gi|306833728|ref|ZP_07466854.1| transcription regulator ExsB [Streptococcus bovis ATCC 700338]
gi|304424065|gb|EFM27205.1| transcription regulator ExsB [Streptococcus bovis ATCC 700338]
Length = 244
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 154/231 (66%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL +D VET++F+YGQR+ +E+E V K I
Sbjct: 29 KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIE----VAKHIA----- 79
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 80 -AEQGVKNHLLDMSLLGQLTENALTRDIVIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 138
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 139 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADQ 198
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G D V E + TCY G + G GC CPAC LRQ G ++ K
Sbjct: 199 LGKFDYVR---ENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 240
>gi|321315127|ref|YP_004207414.1| pre-queuosine 0 synthase [Bacillus subtilis BSn5]
gi|320021401|gb|ADV96387.1| pre-queuosine 0 synthase [Bacillus subtilis BSn5]
Length = 219
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 151/230 (65%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR+ E+E V K I E
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEIE----VAKSIAE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG ++H+L +++L ++ ++LT+N + ++++D LP+TFVPGRN++FL FA+ LAY
Sbjct: 54 ---KLGVKNHLLDMSLLNQLAPNALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAY 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 111 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC+LR KG+ E+
Sbjct: 171 DELGALDFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211
>gi|16078436|ref|NP_389255.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. subtilis str.
168]
gi|221309236|ref|ZP_03591083.1| hypothetical protein Bsubs1_07596 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313564|ref|ZP_03595369.1| hypothetical protein BsubsN3_07537 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318486|ref|ZP_03599780.1| hypothetical protein BsubsJ_07471 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322759|ref|ZP_03604053.1| hypothetical protein BsubsS_07577 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81341924|sp|O31675|QUEC_BACSU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189339604|pdb|3BL5|A Chain A, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339605|pdb|3BL5|B Chain B, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339606|pdb|3BL5|C Chain C, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339607|pdb|3BL5|D Chain D, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339608|pdb|3BL5|E Chain E, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339609|pdb|3BL5|F Chain F, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|2633743|emb|CAB13245.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. subtilis str.
168]
Length = 219
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 151/230 (65%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR+ E+E V K I E
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVE----VAKSIAE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG ++H+L +++L ++ ++LT+N + ++++D LP+TFVPGRN++FL FA+ LAY
Sbjct: 54 ---KLGVKNHLLDMSLLNQLAPNALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAY 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 111 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC+LR KG+ E+
Sbjct: 171 DELGALDFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211
>gi|119774961|ref|YP_927701.1| ExsB protein [Shewanella amazonensis SB2B]
gi|167016452|sp|A1S6M5|QUEC_SHEAM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119767461|gb|ABM00032.1| ExsB protein [Shewanella amazonensis SB2B]
Length = 230
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 148/227 (65%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +FD V ++FDYGQR+ E+E + ++
Sbjct: 4 AVVVFSGGQDSTTCLVQALSQFDEVHAITFDYGQRHSEEIEVAKALTSEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
I+ +++LG+++ S+LT++ V+ ++ DN LPNTFVPGRNI+FL A AY+LG
Sbjct: 55 CASHKIMDVSLLGELAISALTRDAIPVSHELMDNGLPNTFVPGRNILFLTLAGIYAYQLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D I+A+E A+NLGM+ + +HTPLMWL K ETW LA
Sbjct: 115 ADTVITGVCETDFSGYPDCRNDFIKAMEQALNLGMDKQLNIHTPLMWLNKAETWALADRY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G +LV + TCY G R G GC CPAC+LR++G ++
Sbjct: 175 GKLELVR---NHTLTCYNGIR------GDGCGDCPACHLRKRGLEDY 212
>gi|296329698|ref|ZP_06872183.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674095|ref|YP_003865767.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153196|gb|EFG94060.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305412339|gb|ADM37458.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 219
Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 151/230 (65%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR+ E+E V K I E
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEIE----VAKSIAE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG ++H+L +++L ++ ++LT+N + ++++D LP+TFVPGRN++FL FA+ LAY
Sbjct: 54 ---KLGVKNHLLDMSLLNQLAPNALTRNDIDIEVKDGELPSTFVPGRNLVFLSFASILAY 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 111 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC+LR KG+ E+
Sbjct: 171 DELGALDFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211
>gi|320546948|ref|ZP_08041249.1| transcription regulator ExsB [Streptococcus equinus ATCC 9812]
gi|320448350|gb|EFW89092.1| transcription regulator ExsB [Streptococcus equinus ATCC 9812]
Length = 217
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 154/228 (67%), Gaps = 19/228 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VET++F+YGQR+ +E+E V K+I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYEHVETVTFNYGQRHSLEIE----VAKQIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D+++PNTFV GRN +FL FAA LA RL
Sbjct: 53 -AEQGVKNHLLDMSLLGQLTENALTRDIEIENPDDDVPNTFVDGRNHLFLSFAAVLAKRL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADK 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D V E + TCY G + G GC CP+C LRQ G ++
Sbjct: 172 LGKFDYVR---ENTLTCYNGIK------GSGCGECPSCKLRQAGLEKY 210
>gi|268680496|ref|YP_003304927.1| exsB protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618527|gb|ACZ12892.1| exsB protein [Sulfurospirillum deleyianum DSM 6946]
Length = 222
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 155/230 (67%), Gaps = 17/230 (7%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL WA +RF+ VE+++FDYGQ++KVE+ +KI L+ K++
Sbjct: 4 ALVVFSGGQDSTTCLGWAKNRFEYVESITFDYGQKHKVEI----AQAQKIASLL-HVKNT 58
Query: 71 LGEDHILPLAILGDISHSSL---TKNV-AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L L L ++ S+L T+++ A NLP +FVP RN IF A A +
Sbjct: 59 L-----LSLDAFSQLNDSALIDSTQDIGAHHRVHTNLPASFVPNRNAIFFTLAHAFAQKQ 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+IGV +TDYSGYPDCR ++A+E A+NLG E+++T H PLM L K ET+ L+++
Sbjct: 114 GIEHIIIGVNQTDYSGYPDCREPFVKALELALNLGSEANITFHYPLMHLTKAETFLLSKE 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G +++L+L ESHTCY G+ +++ WGYGC CPAC LR++GW +++
Sbjct: 174 EG---VLDLVLNESHTCYNGEHSEKHTWGYGCGECPACVLRKQGWEAYEK 220
>gi|311067886|ref|YP_003972809.1| YkvJ protein [Bacillus atrophaeus 1942]
gi|310868403|gb|ADP31878.1| YkvJ [Bacillus atrophaeus 1942]
Length = 219
Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 151/232 (65%), Gaps = 22/232 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR++ E++ V K I E
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHQQEID----VAKAIAE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG ++H+L +++L ++ ++LT++ + ++ +D LP+TFVPGRN++FL FA+ LAY
Sbjct: 54 ---ELGVKNHLLDMSLLNQLAPNALTRDDIKIEAKDGELPSTFVPGRNLVFLSFASILAY 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 111 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G D V + TCY G GC CPAC LR KG+ E+ E
Sbjct: 171 DELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYEEYME 213
>gi|291483907|dbj|BAI84982.1| hypothetical protein BSNT_02306 [Bacillus subtilis subsp. natto
BEST195]
Length = 219
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 150/230 (65%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR+ E+E V K I E
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEIE----VAKSIAE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG ++H+L +++L ++ ++LT+N + ++++D LP+TFVPGRN++FL FA+ LA+
Sbjct: 54 ---KLGVKNHLLDMSLLNQLAPNALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAF 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKL
Sbjct: 111 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLV 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G + V + TCY G GC CPAC+LR KG+ E+
Sbjct: 171 DELGALEFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211
>gi|307637328|gb|ADN79778.1| Queuosine Biosynthesis QueC ATPase [Helicobacter pylori 908]
gi|325995919|gb|ADZ51324.1| Queuosine Biosynthesis protein [Helicobacter pylori 2018]
gi|325997513|gb|ADZ49721.1| Queuosine Biosynthesis QueC ATPase [Helicobacter pylori 2017]
Length = 228
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 18/228 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A +LG +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLGA 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 180 LD---LIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQAK 224
>gi|317181953|dbj|BAJ59737.1| ExsB trans-regulatory protein [Helicobacter pylori F57]
Length = 226
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 147/226 (65%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSSTAIKILTPLMFLNKAQEFQMAKDLGA 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D LI++E+HTCY G+R + +GYGCN CPAC LR+KG+ EF+
Sbjct: 180 LD---LIIKETHTCYQGERKILHAYGYGCNECPACQLRKKGYEEFE 222
>gi|322392674|ref|ZP_08066134.1| transcription regulator ExsB [Streptococcus peroris ATCC 700780]
gi|321144666|gb|EFX40067.1| transcription regulator ExsB [Streptococcus peroris ATCC 700780]
Length = 217
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 146/224 (65%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA ++RVE ++F YGQR+ +E++ V K+I E
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKQHYERVEAVTFAYGQRHHLEIQ----VAKEIAE---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIHHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G R G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGIR------GAGCGDCPACHLRQHG 206
>gi|317014059|gb|ADU81495.1| hypothetical protein HPGAM_03285 [Helicobacter pylori Gambia94/24]
Length = 225
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 150/228 (65%), Gaps = 18/228 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A +LG +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 179 --VLDLIIKETHTCYQGERKILHAYGYGCDECPACQLRKKGFEEFQAK 224
>gi|194014818|ref|ZP_03053435.1| ExsB protein [Bacillus pumilus ATCC 7061]
gi|194013844|gb|EDW23409.1| ExsB protein [Bacillus pumilus ATCC 7061]
Length = 218
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 155/235 (65%), Gaps = 25/235 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +F+ VET++F Y QR++ E++ V K+I
Sbjct: 2 KNEKAVVVFSGGQDSTTCLLWALQQFEEVETVTFHYNQRHQEEID----VAKRIA----- 52
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
D LG ++H+L +++L ++ ++LT++ + ++ ++ LP+TFVPGRN++FL FA+ LAY
Sbjct: 53 --DKLGVKNHLLDMSLLNQLAPNALTRDDIDIEEKEGELPSTFVPGRNLVFLSFASILAY 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 111 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
++ D V E+ TCY G GC CPAC LR+KG +ME KE
Sbjct: 171 DELNALDFVK---NETLTCYNGIMSD------GCGECPACKLRKKGYDTYMEMKE 216
>gi|315586680|gb|ADU41061.1| transcription regulator ExsB [Helicobacter pylori 35A]
Length = 226
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 148/226 (65%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN I Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 180 LD---LIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGYEEFE 222
>gi|261839533|gb|ACX99298.1| PP family ATPase [Helicobacter pylori 52]
Length = 226
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 150/229 (65%), Gaps = 18/229 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN I Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G D LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 177 LGALD---LIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGYEEFE 222
>gi|317177457|dbj|BAJ55246.1| ExsB trans-regulatory protein [Helicobacter pylori F16]
Length = 226
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 150/229 (65%), Gaps = 18/229 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN I Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIENALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G DLV ++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 177 LGALDLV---IKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFE 222
>gi|290580632|ref|YP_003485024.1| putative aluminium resistance ATPase [Streptococcus mutans NN2025]
gi|254997531|dbj|BAH88132.1| putative ATPase, confers aluminum resistance [Streptococcus mutans
NN2025]
Length = 217
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 148/228 (64%), Gaps = 19/228 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VET++F YGQR+ ELE V K+I
Sbjct: 2 KRQSALIVFSGGQDSTTCLFWAMKHYEYVETVTFSYGQRHSQELE----VAKEIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + HIL +++LG I+ ++LT ++A++ +D +PNTFV GRN +FL FAA LA +
Sbjct: 53 -AEQGVKHHILDMSLLGQITENALTSDIAIETKDGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +IV GVC+TD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 KIRDIVTGVCQTDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D V +++ TCY G R G GC CPAC+LRQ G ++
Sbjct: 172 LGKFDYVR---QKTLTCYNGIR------GTGCRQCPACHLRQAGLEKY 210
>gi|15614807|ref|NP_243110.1| aluminum resistance protein [Bacillus halodurans C-125]
gi|81786626|sp|Q9KAP3|QUEC_BACHD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|10174863|dbj|BAB05963.1| aluminum resistance protein [Bacillus halodurans C-125]
Length = 223
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/227 (48%), Positives = 146/227 (64%), Gaps = 23/227 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL FD V T++FDYGQR+ E+EC K+I E
Sbjct: 4 KKKKAVVVFSGGQDSTTCLFWALKTFDEVATVTFDYGQRHAEEIECA----KEIAE---- 55
Query: 67 WKDSLGED-HILPLAILGDISHSSLTKN-VAMKIQDNN-LPNTFVPGRNIIFLVFAATLA 123
LG +L + +L ++ S+LT+ +A+K +N LP+TFVPGRN +FL FAA A
Sbjct: 56 ---QLGVSFRVLDMTLLNQLTESALTREEIAVKDGENGELPSTFVPGRNQLFLSFAAVYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++G ++V GVCETDYSGYPDCR I+++ +NL M+ +HTPLMWL K ETWKL
Sbjct: 113 KQIGARHLVTGVCETDYSGYPDCRDVFIKSLNVTLNLAMDDQFVIHTPLMWLDKAETWKL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
A ++G D V E++ TCY G R G GC CPAC LR++G
Sbjct: 173 ADELGALDFVR---EKTLTCYHGIR------GDGCGECPACMLRRRG 210
>gi|328911421|gb|AEB63017.1| 7-cyano-7-deazaguanine synthase [Bacillus amyloliquefaciens LL3]
Length = 227
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 149/230 (64%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR++ E++ V K I E
Sbjct: 10 KKEKAVVVFSGGQDSTTCLLWALQNFEEVETVTFHYNQRHQEEID----VAKSIAE---- 61
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG ++H+L +++L ++ ++LT++ + ++ +D LP TFVPGRN++FL FA+ LAY
Sbjct: 62 ---KLGVKNHLLDMSLLNQLAPNALTRDDIEIEAKDGELPTTFVPGRNLVFLSFASILAY 118
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 119 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLA 178
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC LR KG+ E+
Sbjct: 179 DELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYDEY 219
>gi|154685782|ref|YP_001420943.1| YkvJ [Bacillus amyloliquefaciens FZB42]
gi|154351633|gb|ABS73712.1| YkvJ [Bacillus amyloliquefaciens FZB42]
Length = 248
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 149/230 (64%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR++ E++ V K I E
Sbjct: 31 KKEKAVVVFSGGQDSTTCLLWALQNFEEVETVTFHYNQRHQEEID----VAKSIAE---- 82
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG ++H+L +++L ++ ++LT++ + ++ +D LP TFVPGRN++FL FA+ LAY
Sbjct: 83 ---KLGVKNHLLDMSLLNQLAPNALTRDDIEIEAKDGELPTTFVPGRNLVFLSFASILAY 139
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 140 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLA 199
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC LR KG+ E+
Sbjct: 200 DELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYDEY 240
>gi|24379365|ref|NP_721320.1| putative ATPase, confers aluminum resistance [Streptococcus mutans
UA159]
gi|81451748|sp|Q8DUK7|QUEC_STRMU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24377292|gb|AAN58626.1|AE014932_9 putative ATPase, confers aluminum resistance [Streptococcus mutans
UA159]
Length = 217
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 148/228 (64%), Gaps = 19/228 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VET++F YGQR+ ELE V K+I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMKHYEYVETVTFSYGQRHSQELE----VAKEIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + HIL +++LG I+ ++LT ++A++ +D +PNTFV GRN +FL FAA LA +
Sbjct: 53 -AEQGVKHHILDMSLLGQITENALTSDIAIETKDGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +IV GVC+TD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 KIRDIVTGVCQTDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D V +++ TCY G R G GC CPAC+LRQ G ++
Sbjct: 172 LGKFDYVR---QKTLTCYNGIR------GTGCRQCPACHLRQAGLEKY 210
>gi|317010860|gb|ADU84607.1| hypothetical protein HPSA_03020 [Helicobacter pylori SouthAfrica7]
Length = 225
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 149/226 (65%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A +LG +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 179 --VLDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGYEEFQ 222
>gi|317180475|dbj|BAJ58261.1| ExsB trans-regulatory protein [Helicobacter pylori F32]
Length = 226
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 150/229 (65%), Gaps = 18/229 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN I Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKNSNNLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G D LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 177 LGALD---LIIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFE 222
>gi|308173343|ref|YP_003920048.1| QueC [Bacillus amyloliquefaciens DSM 7]
gi|189039060|sp|A7Z3Y6|QUEC_BACA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|307606207|emb|CBI42578.1| QueC [Bacillus amyloliquefaciens DSM 7]
gi|328553730|gb|AEB24222.1| QueC [Bacillus amyloliquefaciens TA208]
Length = 219
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 149/230 (64%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR++ E++ V K I E
Sbjct: 2 KKEKAVVVFSGGQDSTTCLLWALQNFEEVETVTFHYNQRHQEEID----VAKSIAE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG ++H+L +++L ++ ++LT++ + ++ +D LP TFVPGRN++FL FA+ LAY
Sbjct: 54 ---KLGVKNHLLDMSLLNQLAPNALTRDDIEIEAKDGELPTTFVPGRNLVFLSFASILAY 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 111 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC LR KG+ E+
Sbjct: 171 DELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYDEY 211
>gi|228477584|ref|ZP_04062217.1| ExsB protein [Streptococcus salivarius SK126]
gi|228250728|gb|EEK09926.1| ExsB protein [Streptococcus salivarius SK126]
Length = 217
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 149/232 (64%), Gaps = 23/232 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E V K+I +
Sbjct: 2 KRRSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIE----VAKEIAQ---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G D V E++ TCY G G GC CPAC+LRQKG EKY
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGECPACHLRQKGL----EKY 210
>gi|157692044|ref|YP_001486506.1| transcriptional regulator [Bacillus pumilus SAFR-032]
gi|189038896|sp|A8FCH9|QUEC_BACP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157680802|gb|ABV61946.1| possible transcriptional regulator [Bacillus pumilus SAFR-032]
Length = 218
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 155/235 (65%), Gaps = 25/235 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +F+ VET++F Y QR++ E++ V K+I
Sbjct: 2 KNEKAVVVFSGGQDSTTCLLWALQQFEEVETVTFHYNQRHQEEID----VAKRIA----- 52
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
D LG ++H+L +++L ++ ++LT++ + ++ ++ LP+TFVPGRN++FL FA+ LAY
Sbjct: 53 --DKLGVKNHLLDMSLLNQLAPNALTRDDIDIEEKEGELPSTFVPGRNLVFLSFASILAY 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 111 QIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
++ D V E+ TCY G GC CPAC LR+KG +ME KE
Sbjct: 171 DELNALDFVK---NETLTCYNGIISD------GCGECPACKLRKKGYDTYMEMKE 216
>gi|297578951|ref|ZP_06940879.1| exsB protein [Vibrio cholerae RC385]
gi|297536545|gb|EFH75378.1| exsB protein [Vibrio cholerae RC385]
Length = 231
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 146/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
T ++ GVCETD+SGYPDCRH+ ++A+ A+ GM+ +T+ TPLMWL K ETW LA +
Sbjct: 115 ATTVITGVCETDFSGYPDCRHEFVQAMNQALAKGMDLPLTIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC LRQ G +
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|312863345|ref|ZP_07723583.1| protein ExsB [Streptococcus vestibularis F0396]
gi|311100881|gb|EFQ59086.1| protein ExsB [Streptococcus vestibularis F0396]
Length = 217
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 149/232 (64%), Gaps = 23/232 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E V K+I +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIE----VAKEIAQ---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G D V E++ TCY G G GC CPAC+LRQKG EKY
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQKGL----EKY 210
>gi|15611649|ref|NP_223300.1| hypothetical protein jhp0582 [Helicobacter pylori J99]
gi|81555414|sp|Q9ZLJ7|QUEC_HELPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|4155143|gb|AAD06173.1| putative [Helicobacter pylori J99]
Length = 225
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 149/226 (65%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A +LG +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 179 --VLDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQ 222
>gi|167623865|ref|YP_001674159.1| exsB protein [Shewanella halifaxensis HAW-EB4]
gi|189029313|sp|B0TSC0|QUEC_SHEHH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167353887|gb|ABZ76500.1| exsB protein [Shewanella halifaxensis HAW-EB4]
Length = 229
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 149/227 (65%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +FD V ++FDYGQR++ E+E + K EL K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQFDEVHGITFDYGQRHREEIE----IAK---ELATNLK-- 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L ++ + +L +++ S+LT++ V+ ++ DN LPNTFVPGRNI+FL A AY+LG
Sbjct: 55 LASHKVMDVTLLNELAISALTRDSIPVSNELMDNGLPNTFVPGRNILFLTLAGIYAYQLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A++ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 115 ADTVITGVCETDFSGYPDCRNDFVKAMQAALEQGMDKKLTIQTPLMWLDKAETWALADKF 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D + L+ E+ TCY G + G GC +CPAC LR++G E+
Sbjct: 175 ---DSLELVRNETLTCYNGIK------GDGCGTCPACLLRKRGLEEY 212
>gi|308184425|ref|YP_003928558.1| hypothetical protein HPSJM_03245 [Helicobacter pylori SJM180]
gi|308060345|gb|ADO02241.1| hypothetical protein HPSJM_03245 [Helicobacter pylori SJM180]
Length = 225
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 150/226 (66%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN I Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIPLGFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGFEEFQ 222
>gi|312278213|gb|ADQ62870.1| Putative ATPase, confers aluminum resistance [Streptococcus
thermophilus ND03]
Length = 217
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 149/232 (64%), Gaps = 23/232 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E V K+I +
Sbjct: 2 KRQSALIVFSGGQDSTTCLFWALKHYEIVELVTFAYGQRHSLEIE----VAKEIAQ---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIDIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G D V E++ TCY G G GC CPAC+LRQKG EKY
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQKGL----EKY 210
>gi|332673487|gb|AEE70304.1| transcription regulator ExsB [Helicobacter pylori 83]
Length = 226
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 150/229 (65%), Gaps = 18/229 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVYLVGFDYVQKHFVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN I Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIENALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G DLV ++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 177 LGALDLV---IKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFE 222
>gi|322373084|ref|ZP_08047620.1| ExsB protein [Streptococcus sp. C150]
gi|321278126|gb|EFX55195.1| ExsB protein [Streptococcus sp. C150]
Length = 217
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 148/229 (64%), Gaps = 23/229 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E V K+I K+
Sbjct: 5 SALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIE----VAKEIA------KE 54
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA + GIT
Sbjct: 55 QGLKHHVLDMSLLGQITENALTSDIEIESEEGEVPNTFVDGRNHLFLSFAAVLAKQRGIT 114
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA +G
Sbjct: 115 DIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQLGA 174
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D V E++ TCY G G GC CPAC+LRQ+G EKY
Sbjct: 175 FDYVR---EKTLTCYNGI------IGTGCGECPACHLRQRGL----EKY 210
>gi|170726898|ref|YP_001760924.1| exsB protein [Shewanella woodyi ATCC 51908]
gi|169812245|gb|ACA86829.1| exsB protein [Shewanella woodyi ATCC 51908]
Length = 233
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 153/240 (63%), Gaps = 24/240 (10%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + +++
Sbjct: 3 KAVSKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHRQEIEVAETLGQQL----- 57
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L L +++L +++ S+LT++ V+ ++ DN LPNTFVPGRNI+FL A
Sbjct: 58 ----GLKSHKTLDVSMLNELAISALTRDSIQVSNELMDNGLPNTFVPGRNILFLTLAGIF 113
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AY+LG ++ GVCETD+SGYPDCR+D ++A+++A+ GM+ +T+ TPLMWL K ETW
Sbjct: 114 AYQLGADTVITGVCETDFSGYPDCRNDFVKAMQSALEQGMDRKLTLSTPLMWLNKAETWA 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF---KEKYQ 239
LA DLV +E+ TCY G G GC +CPAC LRQKG ++ KE+ Q
Sbjct: 174 LADKYHSLDLVR---DETLTCYNGI------VGTGCGTCPACLLRQKGLDDYCNNKEQVQ 224
>gi|188527512|ref|YP_001910199.1| ExsB trans-regulatory protein [Helicobacter pylori Shi470]
gi|308182872|ref|YP_003926999.1| ExsB trans-regulatory protein [Helicobacter pylori PeCan4]
gi|254764353|sp|B2UTI7|QUEC_HELPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|188143752|gb|ACD48169.1| ExsB trans-regulatory protein [Helicobacter pylori Shi470]
gi|297379840|gb|ADI34727.1| exsB protein [Helicobacter pylori v225d]
gi|308065057|gb|ADO06949.1| ExsB trans-regulatory protein [Helicobacter pylori PeCan4]
Length = 226
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 148/226 (65%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+++L+++E+HTCY G+R + +GYGC CPAC LR+KG+ EF+
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCGECPACQLRKKGYEEFE 222
>gi|322516973|ref|ZP_08069863.1| transcription regulator ExsB [Streptococcus vestibularis ATCC
49124]
gi|322124456|gb|EFX95951.1| transcription regulator ExsB [Streptococcus vestibularis ATCC
49124]
Length = 217
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 149/232 (64%), Gaps = 23/232 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E V K+I +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIE----VAKEIAQ---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDLEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G D V E++ TCY G G GC CPAC+LRQKG EKY
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGECPACHLRQKGL----EKY 210
>gi|262165605|ref|ZP_06033342.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus VM223]
gi|262025321|gb|EEY43989.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus VM223]
Length = 231
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 148/227 (65%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V +K+ + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIE----VAQKLAKQL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVGLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA +
Sbjct: 115 AATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC+LR+ G ++
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACHLRKAGLNDY 212
>gi|258627552|ref|ZP_05722329.1| ExsB protein [Vibrio mimicus VM603]
gi|258580134|gb|EEW05106.1| ExsB protein [Vibrio mimicus VM603]
Length = 231
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 148/227 (65%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V +K+ + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIE----VAQKLAKQL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVGLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA +
Sbjct: 115 AATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC+LR+ G ++
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACHLRKSGLNDY 212
>gi|261838120|gb|ACX97886.1| ExsB trans-regulatory protein [Helicobacter pylori 51]
Length = 226
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 152/229 (66%), Gaps = 18/229 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 IISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L K+ I Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKSSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G +++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 177 LG---ILDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFE 222
>gi|157962170|ref|YP_001502204.1| exsB protein [Shewanella pealeana ATCC 700345]
gi|189029314|sp|A8H532|QUEC_SHEPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157847170|gb|ABV87669.1| exsB protein [Shewanella pealeana ATCC 700345]
Length = 227
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 145/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR++ E+E + K+
Sbjct: 4 AVVVFSGGQDSTTCLIQALQHFDEVHGITFDYGQRHREEIEIAKTLASKL---------K 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L ++ + +L +++ S+LT++ V+ + DN LPNTFVPGRNI+FL A AY+LG
Sbjct: 55 LASHKVMDVTLLNELAISALTRDSIPVSNDLMDNGLPNTFVPGRNILFLTLAGIYAYQLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A++ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 115 ADVVITGVCETDFSGYPDCRNDFVKAMQAALEQGMDKKLTIQTPLMWLDKAETWALADKY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
DL+ +E+ TCY G + G GC +CPAC LR++G E+
Sbjct: 175 QSLDLIR---DETLTCYNGIK------GDGCGTCPACLLRKRGLEEY 212
>gi|262171604|ref|ZP_06039282.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus MB-451]
gi|261892680|gb|EEY38666.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus MB-451]
Length = 231
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 147/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V +K+ + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIE----VAQKLAKQL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ +Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVGLLNELAISSLTRDDIPVSHDLQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA +
Sbjct: 115 AATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC+LR+ G ++
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACHLRKAGLNDY 212
>gi|315180244|gb|ADT87158.1| queuosine biosynthesis protein QueC [Vibrio furnissii NCTC 11218]
Length = 229
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 148/229 (64%), Gaps = 21/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + KK+
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQTLAKKL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVGLLNELAISSLTRDDIPVSNELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ +A+ LGM+ + + TPLMWL K ETW +A
Sbjct: 115 AQTVITGVCETDFSGYPDCRNDFVKAMNSALVLGMDRELEIRTPLMWLNKAETWAMADQN 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G +LV E+ TCY G G GC CP+C+LR+ G ++ E
Sbjct: 175 GALELVR---HETLTCYNGI------MGDGCGDCPSCHLRKVGLNDYLE 214
>gi|258621537|ref|ZP_05716570.1| ExsB protein [Vibrio mimicus VM573]
gi|258586155|gb|EEW10871.1| ExsB protein [Vibrio mimicus VM573]
Length = 231
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 147/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V +K+ + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIE----VAQKLAKQL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ +Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVGLLNELAISSLTRDDIPVSHDLQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA +
Sbjct: 115 AATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC+LR+ G ++
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACHLRKSGLNDY 212
>gi|308061969|gb|ADO03857.1| ExsB trans-regulatory protein [Helicobacter pylori Cuz20]
gi|308063570|gb|ADO05457.1| ExsB trans-regulatory protein [Helicobacter pylori Sat464]
Length = 226
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 148/226 (65%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+++L+++E+HTCY G+R + +GYGC CPAC LR+KG+ EF+
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCGECPACQLRKKGYEEFE 222
>gi|108563047|ref|YP_627363.1| hypothetical protein HPAG1_0622 [Helicobacter pylori HPAG1]
gi|118574285|sp|Q1CTN3|QUEC_HELPH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|107836820|gb|ABF84689.1| ExsB trans-regulatory protein [Helicobacter pylori HPAG1]
Length = 228
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 149/228 (65%), Gaps = 18/228 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ L L +I+ S+L KN +Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IISLDFLENITRSALFKNSNDLMGHSHVQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+++L+++E+HTCY G+R + +GYGCN CPAC LR+KG+ EF+ K
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCNECPACQLRKKGYEEFQTK 224
>gi|309798878|ref|ZP_07693139.1| ExsB protein [Streptococcus infantis SK1302]
gi|308117527|gb|EFO54942.1| ExsB protein [Streptococcus infantis SK1302]
Length = 217
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 146/224 (65%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V K+I E
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQ----VAKEIAE---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETWKLA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWKLADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQHG 206
>gi|322388782|ref|ZP_08062379.1| transcription regulator ExsB [Streptococcus infantis ATCC 700779]
gi|321140401|gb|EFX35909.1| transcription regulator ExsB [Streptococcus infantis ATCC 700779]
Length = 217
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 146/224 (65%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA ++RVE ++F YGQR+ +E++ V K+I E
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKQHYERVEAVTFAYGQRHHLEIQ----VAKEISE---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQHG 206
>gi|55820874|ref|YP_139316.1| hypothetical protein stu0825 [Streptococcus thermophilus LMG 18311]
gi|55822790|ref|YP_141231.1| hypothetical protein str0825 [Streptococcus thermophilus CNRZ1066]
gi|81559500|sp|Q5M064|QUEC_STRT1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81560693|sp|Q5M4S5|QUEC_STRT2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|55736859|gb|AAV60501.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55738775|gb|AAV62416.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 217
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 147/232 (63%), Gaps = 23/232 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E V K+I +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIE----VAKEIAQ---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ + +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIEIEAEKGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GIIDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G D V E++ TCY G G GC CPAC+LRQKG EKY
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQKGL----EKY 210
>gi|116627683|ref|YP_820302.1| PP-loop superfamily ATPase [Streptococcus thermophilus LMD-9]
gi|122267720|sp|Q03L16|QUEC_STRTD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|116100960|gb|ABJ66106.1| Predicted PP-loop superfamily ATPase [Streptococcus thermophilus
LMD-9]
Length = 217
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 148/232 (63%), Gaps = 23/232 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E V K+I +
Sbjct: 2 KRQSALIVFSGGQDSTTCLFWALKHYEIVELVTFAYGQRHSLEIE----VAKEIAQ---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIDIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GIIDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G D V E++ TCY G G GC CPAC+LRQKG EKY
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQKGL----EKY 210
>gi|289167420|ref|YP_003445689.1| queuosine biosynthesis protein queC [Streptococcus mitis B6]
gi|288906987|emb|CBJ21821.1| queuosine biosynthesis protein queC [Streptococcus mitis B6]
Length = 217
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 146/224 (65%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQ----VAQEIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQQ 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL ME + TPLMWL K ETW+LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMEYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|237807722|ref|YP_002892162.1| exsB protein [Tolumonas auensis DSM 9187]
gi|237499983|gb|ACQ92576.1| exsB protein [Tolumonas auensis DSM 9187]
Length = 232
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 147/229 (64%), Gaps = 21/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A+ ++D V ++FDYGQR+ E+E V ++I +
Sbjct: 8 AVVVFSGGQDSTTCLLYAVQQYDEVHAITFDYGQRHVQEIE----VARQIAADL-----G 58
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L +L + +L +++ S+LT++ V+ +Q+N LPNTFVPGRNI+FL AA AY++G
Sbjct: 59 LAAHKVLDVGLLNELAVSALTRDAIPVSNDLQENGLPNTFVPGRNILFLTLAAIYAYQVG 118
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + ++A+ A+ LGME V TPLMWL K ETW LA I
Sbjct: 119 ADTVITGVCETDFSGYPDCRDEFVKALNHAVKLGMERDVKFETPLMWLNKAETWALADKI 178
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G D V +++ TCY G G GC CPAC LR KG ++++
Sbjct: 179 GRLDYVR---QQTLTCYNGV------IGDGCGECPACKLRAKGLHDYQQ 218
>gi|317009346|gb|ADU79926.1| hypothetical protein HPIN_03450 [Helicobacter pylori India7]
Length = 228
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 145/226 (64%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ L L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIQLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
DLV ++E+HTCY G+R + +GYGC CPAC LR+KG+ EF+
Sbjct: 180 LDLV---IKETHTCYQGERKILHAYGYGCGECPACQLRKKGYEEFQ 222
>gi|253576605|ref|ZP_04853933.1| exsB protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844019|gb|EES72039.1| exsB protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 222
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 146/226 (64%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F VE ++FDYGQR+K+E+EC + +
Sbjct: 3 KKEKAVVVFSGGQDSTTCLFWAIQQFGEVEAVTFDYGQRHKLEIECAKSITAE------- 55
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++LG ++ ++LT+ ++A++ Q+ LP+TFV GRN +FL FAA LA
Sbjct: 56 ----LGIKHTVLDMSLLGQLTANALTRSDIAIEHQEGELPSTFVDGRNHLFLSFAAVLAK 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKLA
Sbjct: 112 GVGAKHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIHTPLMWIDKAETWKLA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G D V E + TCY G G GC CPAC LR+ G
Sbjct: 172 DELGAFDFVR---ERTLTCYNGI------IGDGCGECPACKLRKAG 208
>gi|260768532|ref|ZP_05877466.1| queuosine Biosynthesis QueC ATPase [Vibrio furnissii CIP 102972]
gi|260616562|gb|EEX41747.1| queuosine Biosynthesis QueC ATPase [Vibrio furnissii CIP 102972]
Length = 229
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 148/229 (64%), Gaps = 21/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + KK+
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQTLAKKL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVGLLNELAISSLTRDDIPVSNELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ +A+ LGM+ + + TPLMWL K ETW +A
Sbjct: 115 AQTVITGVCETDFSGYPDCRNDFVKAMNSALVLGMDRELEICTPLMWLNKAETWAMADQN 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G +LV E+ TCY G G GC CP+C+LR+ G ++ E
Sbjct: 175 GALELVR---HETLTCYNGI------MGDGCGDCPSCHLRKVGLNDYLE 214
>gi|117619436|ref|YP_856351.1| exsB protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|167016410|sp|A0KJA0|QUEC_AERHH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|117560843|gb|ABK37791.1| exsB protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 235
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 147/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL R+D V ++FDYGQR++ E+E R+ +L
Sbjct: 4 AVVVFSGGQDSTTCLVQALSRYDEVHAITFDYGQRHREEIET---ARRLASQL------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +LG+++ S+LT++ V+ ++QDN LPNTFVPGRNI+FL AA AY++G
Sbjct: 55 IAAHKVMDVTMLGELAISALTRDEIPVSFELQDNGLPNTFVPGRNILFLTLAAIYAYQVG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + ++A+ A++LG++ + TPLMWL K ETW LA
Sbjct: 115 AEAVITGVCETDFSGYPDCRDEFVKALNQAVSLGLDRAIRFETPLMWLDKAETWALADHY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G D V +++ TCY G G GC +CPAC LR +G ++
Sbjct: 175 GHLDTVR---QQTLTCYNGI------AGDGCGACPACDLRSRGLQQY 212
>gi|15645263|ref|NP_207433.1| hypothetical protein HP0639 [Helicobacter pylori 26695]
gi|81341370|sp|O25356|QUEC_HELPY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|2313760|gb|AAD07701.1| conserved hypothetical protein [Helicobacter pylori 26695]
Length = 226
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+ S+L KN I Q+ +LPN+FVP RN IF+ + A +LG +
Sbjct: 61 -IIPLDFLENITRSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQ 222
>gi|295401299|ref|ZP_06811271.1| exsB protein [Geobacillus thermoglucosidasius C56-YS93]
gi|312111881|ref|YP_003990197.1| exsB protein [Geobacillus sp. Y4.1MC1]
gi|294976706|gb|EFG52312.1| exsB protein [Geobacillus thermoglucosidasius C56-YS93]
gi|311216982|gb|ADP75586.1| exsB protein [Geobacillus sp. Y4.1MC1]
Length = 222
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 152/234 (64%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +FD VE ++FDYGQR+++E+E + K+
Sbjct: 3 KKEKAVVVFSGGQDSTTCLFWALKQFDEVEAVTFDYGQRHRLEIEVAASIAKE------- 55
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++A++ +D LP+TFV GRN++FL FAA LA
Sbjct: 56 ----LGISHTVLDMSLLNQLAPNALTRSDIAIEQKDGQLPSTFVDGRNLLFLSFAAVLAK 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TWKLA
Sbjct: 112 QKGARHLVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYQFVIHTPLMWLTKAQTWKLA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEK 237
++G + V ++ TCY G GC CPAC LR++G E+ KEK
Sbjct: 172 DELGAFEFVR---TKTLTCYNGI------IADGCGECPACVLRRRGLEEYMKEK 216
>gi|109947331|ref|YP_664559.1| hypothetical protein Hac_0767 [Helicobacter acinonychis str.
Sheeba]
gi|123173443|sp|Q17XR6|QUEC_HELAH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|109714552|emb|CAJ99560.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 225
Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 148/232 (63%), Gaps = 18/232 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAIWAAKRFKKVYLVGFDYAQKHSVELECA----QKIASLLKLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+HS+L KN +Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IIQLDFLENITHSALFKNSNDLIGHSHVQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GANNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTTIKIVTPLMFLSKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G D LI++E+HTCY G+R + +GYGC C AC LR+KG+ EF+ ++
Sbjct: 177 LGALD---LIIKETHTCYQGERKILHAYGYGCGECLACQLRKKGYEEFQARF 225
>gi|312884428|ref|ZP_07744132.1| queuosine biosynthesis protein QueC [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367740|gb|EFP95288.1| queuosine biosynthesis protein QueC [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 231
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 150/229 (65%), Gaps = 25/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL A+ ++D V T++FDYGQR+++E+E V + I D
Sbjct: 4 AVVVFSGGQDSTTCLMQAIKQYDEVHTITFDYGQRHRLEIE----VARSIA-------DE 52
Query: 71 LG--EDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG ++ + +L D++ SSLT++ V+ +Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 53 LGVKAHKVMDVTLLNDLAASSLTRDNIAVSNDVQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +++ GVCETD+SGYPDCR+D ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 VGAHDLITGVCETDFSGYPDCRNDFVQAMGKALEQGMDRQLNIITPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G DL+ +++ TCY G G GC CP+C+LR KG ++
Sbjct: 173 SLGALDLIK---DKTLTCYNGI------IGEGCGDCPSCHLRTKGLDDY 212
>gi|34557973|ref|NP_907788.1| PP family ATPase [Wolinella succinogenes DSM 1740]
gi|81653435|sp|Q7M8H4|QUEC_WOLSU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|34483691|emb|CAE10688.1| ATPASE-PP-loop superfamily [Wolinella succinogenes]
Length = 233
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 144/231 (62%), Gaps = 20/231 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA+ F VE ++FDYGQR+++E+E RL +K ++
Sbjct: 14 ALVVFSGGQDSTTCLGWAIKHFKSVEAITFDYGQRHRIEIEQSRLIAQKLGIKQF----- 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVA-MKIQDN----NLPNTFVPGRNIIFLVFAATLAY 124
IL + + S+L + + +K + +LP +FVP RN +F A A
Sbjct: 69 ------ILEFDLFSKLGDSALLETSSDLKASPHRTKPHLPASFVPNRNALFFTLAHAYAQ 122
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+T+I+ G+ E DYSGYPDCR + I +E +NLG +S + PL+ K +T+ LA
Sbjct: 123 REGLTHIITGISEADYSGYPDCREEFITHLERTLNLGSDSSILFAYPLLHRNKAQTFALA 182
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++ G +++L+LEESHTCY G R RYEWGYGC CPAC LR+KGW E++
Sbjct: 183 KECG---VLDLVLEESHTCYNGDRSHRYEWGYGCKECPACGLREKGWREYQ 230
>gi|157375185|ref|YP_001473785.1| ExsB protein [Shewanella sediminis HAW-EB3]
gi|189029565|sp|A8FUY4|QUEC_SHESH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157317559|gb|ABV36657.1| ExsB protein [Shewanella sediminis HAW-EB3]
Length = 232
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 149/234 (63%), Gaps = 21/234 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL AL+++D V ++FDYGQR+ E+E + +++
Sbjct: 1 MSKVSKAVVVFSGGQDSTTCLIQALNQYDEVHGITFDYGQRHSQEIEVARSLGQRL---- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L IL +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A
Sbjct: 57 -----GLVSHKILDVSMLNELAISALTRDSIEVSNELMENGLPNTFVPGRNILFLTLAGI 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
AY+LG +++ GVCETD+SGYPDCR+D ++ +E+A+N GM+ + TPLMWL K ETW
Sbjct: 112 YAYQLGADSVITGVCETDFSGYPDCRNDFVKTMESALNQGMDRQCKIVTPLMWLNKAETW 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
LA +LV +E+ TCY G G GC +CPAC LRQ G ++
Sbjct: 172 ALADQYKSLELVR---DETLTCYNGI------IGNGCGTCPACLLRQSGLEDYS 216
>gi|229543595|ref|ZP_04432655.1| exsB protein [Bacillus coagulans 36D1]
gi|229328015|gb|EEN93690.1| exsB protein [Bacillus coagulans 36D1]
Length = 221
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 146/231 (63%), Gaps = 23/231 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +F VE ++FDYGQR+++E+EC K I E
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAKKKFQEVEAVTFDYGQRHRLEIECA----KNIAE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTK-NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLA 123
LG + HIL + +L ++ ++LT+ ++ +K D LPNTFVPGRN++FL FA LA
Sbjct: 54 ---ELGVKQHILDMQLLNQLAPNALTRESITVKAGADGELPNTFVPGRNLLFLSFAGVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMW K ETW L
Sbjct: 111 SQIGARHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLSMDQQFVIHTPLMWRNKAETWAL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A ++G D V E++ TCY G GC CPAC LR++G ++
Sbjct: 171 ADELGAFDFVR---EKTLTCYNGI------IADGCGECPACKLRKRGLEQY 212
>gi|322375720|ref|ZP_08050232.1| ExsB protein [Streptococcus sp. C300]
gi|321279428|gb|EFX56469.1| ExsB protein [Streptococcus sp. C300]
Length = 217
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 146/224 (65%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQ----VAEEIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +L
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGSFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|317178997|dbj|BAJ56785.1| ExsB trans-regulatory protein [Helicobacter pylori F30]
Length = 226
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 149/229 (65%), Gaps = 18/229 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I++S+L KN I Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIQLDFLENITYSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKKDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G D LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 177 LGALD---LIIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFE 222
>gi|312864994|ref|ZP_07725222.1| protein ExsB [Streptococcus downei F0415]
gi|311099105|gb|EFQ57321.1| protein ExsB [Streptococcus downei F0415]
Length = 217
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 143/224 (63%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ E+E V K I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKNYNHVEAVTFAYGQRHSHEVE----VAKGIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
KD E +L +++LG I++++LT ++ ++ Q+ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KDLEIEHQVLDMSLLGQITNNALTSDMEIEAQEGQVPNTFVDGRNHLFLSFAAILAKQK 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI++IV GVCETD+SGYPDCR ++++ +NL M + + TPLMWL K ETW+LA
Sbjct: 112 GISDIVTGVCETDFSGYPDCRDAFVKSLNVTLNLAMNYNFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V ++ TCY G G GC CPAC LRQ G
Sbjct: 172 LGAFDYVK---GKTLTCYNGI------MGAGCGECPACKLRQHG 206
>gi|254779374|ref|YP_003057479.1| hypothetical protein HELPY_0732 [Helicobacter pylori B38]
gi|254001285|emb|CAX29262.1| Conserved hypothetical protein, putative trans-regulatory protein
[Helicobacter pylori B38]
Length = 228
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 149/228 (65%), Gaps = 18/228 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ L L +I+ S+L KN I Q+ +LPN+FVP RN IF+ + A +LG +
Sbjct: 61 -IISLDFLENITRSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQAK 224
>gi|262404008|ref|ZP_06080563.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC586]
gi|262349040|gb|EEY98178.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC586]
Length = 231
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 147/229 (64%), Gaps = 21/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEIAQKLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVNLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++++ A+ GM+ + + TPLMWL K +TW LA +
Sbjct: 115 ADTVITGVCETDFSGYPDCRNDFVQSMNQALAKGMDMSLNIRTPLMWLNKAQTWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G +LV +++ TCY G G GC CPAC+LRQ G E+ E
Sbjct: 175 GALELVR---KQTLTCYNGL------IGDGCGECPACHLRQAGLNEYLE 214
>gi|327484036|gb|AEA78443.1| Queuosine Biosynthesis QueC ATPase [Vibrio cholerae LMA3894-4]
Length = 231
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA +
Sbjct: 115 ATTVITGVCETDFSGYPDCRDEFVKAMNQALAKGMDLPLMIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC LRQ G +
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|331265895|ref|YP_004325525.1| ExsB family protein; Adenosine nucleotide binding superfamily of
proteins [Streptococcus oralis Uo5]
gi|326682567|emb|CBZ00184.1| ExsB family protein; Adenosine nucleotide binding superfamily of
proteins [Streptococcus oralis Uo5]
Length = 217
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 145/224 (64%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + + VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYKTVEAVTFAYGQRHHLEIQ----VAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +L
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|306824723|ref|ZP_07458067.1| transcription regulator ExsB [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432934|gb|EFM35906.1| transcription regulator ExsB [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 217
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 145/224 (64%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQ----VAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDLEIEQKEREVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETWKLA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWKLADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|239826405|ref|YP_002949029.1| exsB protein [Geobacillus sp. WCH70]
gi|259551536|sp|C5D7Y2|QUEC_GEOSW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|239806698|gb|ACS23763.1| exsB protein [Geobacillus sp. WCH70]
Length = 221
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 151/234 (64%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +FD VE ++FDYGQR+++E+E + K+
Sbjct: 2 KKEKAIVVFSGGQDSTTCLFWALKQFDEVEAVTFDYGQRHRLEIEVAASIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++A++ + LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGVPHTVLDMSLLNQLAPNALTRSDIAIEQNEGQLPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TWKLA
Sbjct: 111 QKGARHLVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYQFVIHTPLMWLTKAKTWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEK 237
++G D V ++ TCY G GC CPAC LR++G E+ KEK
Sbjct: 171 DELGAFDFVR---TKTLTCYNGI------IADGCGECPACVLRRRGLEEYMKEK 215
>gi|52079921|ref|YP_078712.1| queuosine (Q) synthesis protein QueC [Bacillus licheniformis ATCC
14580]
gi|52785292|ref|YP_091121.1| YkvJ [Bacillus licheniformis ATCC 14580]
gi|319646262|ref|ZP_08000492.1| queuosine biosynthesis protein queC [Bacillus sp. BT1B_CT2]
gi|81385781|sp|Q65KI6|QUEC_BACLD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|52003132|gb|AAU23074.1| Queuosine (Q) synthesis protein QueC [Bacillus licheniformis ATCC
14580]
gi|52347794|gb|AAU40428.1| YkvJ [Bacillus licheniformis ATCC 14580]
gi|317392012|gb|EFV72809.1| queuosine biosynthesis protein queC [Bacillus sp. BT1B_CT2]
Length = 219
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 148/230 (64%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +F VE ++F Y QR+K E+E V KKI
Sbjct: 2 KQEKAIVVFSGGQDSTTCLLWALRQFQEVEAVTFQYNQRHKQEIE----VAKKIAA---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG + H+L + +L ++ ++LT++ + ++ ++ LP+TFVPGRN++FL FA+ LAY
Sbjct: 54 ---KLGVKHHLLDMELLNQLAPNALTRDDIEIEAKEGELPSTFVPGRNLVFLSFASILAY 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETW+LA
Sbjct: 111 QVGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMERPFVIHTPLMWLNKAETWELA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++ D ++ + E+ TCY G GC CPAC LR G+ E+
Sbjct: 171 DEL---DALDFVKNETLTCYNGI------IADGCGECPACKLRANGYNEY 211
>gi|229515738|ref|ZP_04405197.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TMA 21]
gi|229347507|gb|EEO12467.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TMA 21]
Length = 231
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSYELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA +
Sbjct: 115 ATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC LRQ G +
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|15641378|ref|NP_231010.1| queuosine biosynthesis protein QueC [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121728522|ref|ZP_01681545.1| exsB protein [Vibrio cholerae V52]
gi|147673208|ref|YP_001216925.1| queuosine biosynthesis protein QueC [Vibrio cholerae O395]
gi|153819361|ref|ZP_01972028.1| exsB protein [Vibrio cholerae NCTC 8457]
gi|153821348|ref|ZP_01974015.1| exsB protein [Vibrio cholerae B33]
gi|227081537|ref|YP_002810088.1| exsB protein [Vibrio cholerae M66-2]
gi|229505053|ref|ZP_04394563.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae BX 330286]
gi|229511277|ref|ZP_04400756.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae B33]
gi|229518395|ref|ZP_04407839.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC9]
gi|229608057|ref|YP_002878705.1| queuosine biosynthesis protein QueC [Vibrio cholerae MJ-1236]
gi|254848488|ref|ZP_05237838.1| exsB protein [Vibrio cholerae MO10]
gi|255745753|ref|ZP_05419701.1| queuosine Biosynthesis QueC ATPase [Vibrio cholera CIRS 101]
gi|262158969|ref|ZP_06030081.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae INDRE 91/1]
gi|262169328|ref|ZP_06037020.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC27]
gi|262192385|ref|ZP_06050538.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae CT 5369-93]
gi|298498550|ref|ZP_07008357.1| exsB protein [Vibrio cholerae MAK 757]
gi|81545006|sp|Q9KS93|QUEC_VIBCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|172047686|sp|A5F8G4|QUEC_VIBC3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764389|sp|C3LM61|QUEC_VIBCM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|9655860|gb|AAF94524.1| exsB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121629186|gb|EAX61626.1| exsB protein [Vibrio cholerae V52]
gi|126510106|gb|EAZ72700.1| exsB protein [Vibrio cholerae NCTC 8457]
gi|126521166|gb|EAZ78389.1| exsB protein [Vibrio cholerae B33]
gi|146315091|gb|ABQ19630.1| exsB protein [Vibrio cholerae O395]
gi|227009425|gb|ACP05637.1| exsB protein [Vibrio cholerae M66-2]
gi|227013283|gb|ACP09493.1| exsB protein [Vibrio cholerae O395]
gi|229345110|gb|EEO10084.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC9]
gi|229351242|gb|EEO16183.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae B33]
gi|229357276|gb|EEO22193.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae BX 330286]
gi|229370712|gb|ACQ61135.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae MJ-1236]
gi|254844193|gb|EET22607.1| exsB protein [Vibrio cholerae MO10]
gi|255736828|gb|EET92225.1| queuosine Biosynthesis QueC ATPase [Vibrio cholera CIRS 101]
gi|262022141|gb|EEY40850.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC27]
gi|262029154|gb|EEY47806.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae INDRE 91/1]
gi|262031738|gb|EEY50323.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae CT 5369-93]
gi|297542883|gb|EFH78933.1| exsB protein [Vibrio cholerae MAK 757]
Length = 231
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA +
Sbjct: 115 ATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC LRQ G +
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|260772756|ref|ZP_05881672.1| queuosine Biosynthesis QueC ATPase [Vibrio metschnikovii CIP 69.14]
gi|260611895|gb|EEX37098.1| queuosine Biosynthesis QueC ATPase [Vibrio metschnikovii CIP 69.14]
Length = 232
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 145/232 (62%), Gaps = 21/232 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V K
Sbjct: 4 AVVVFSGGQDSTTCLVQALQEFDEVHAITFDYGQRHKLEIE---------VAQQLALKLG 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 115 ADTIITGVCETDFSGYPDCRNDFVKAMNHALVQGMDRQLTIRTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
DLV E+ TCY G G GC +CPAC LR+ G ++ + Q
Sbjct: 175 QALDLVR---NETLTCYNGM------IGDGCGTCPACELRKAGLNQYLQHPQ 217
>gi|254228267|ref|ZP_04921696.1| ExsB protein [Vibrio sp. Ex25]
gi|262394170|ref|YP_003286024.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. Ex25]
gi|151939340|gb|EDN58169.1| ExsB protein [Vibrio sp. Ex25]
gi|262337764|gb|ACY51559.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. Ex25]
Length = 231
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 145/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQNIAKDL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR D ++A+ TA+ GM+ ++T+ TPLMWL K ETW LA
Sbjct: 115 AETVITGVCETDFSGYPDCRDDFVKAMNTALVKGMDRNLTIKTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D + L+ E + TCY G G GC CP+C LR+ G ++
Sbjct: 175 ---DALQLVRENTLTCYNGV------IGDGCGDCPSCDLRKAGLDDY 212
>gi|153825260|ref|ZP_01977927.1| exsB protein [Vibrio cholerae MZO-2]
gi|153828777|ref|ZP_01981444.1| exsB protein [Vibrio cholerae 623-39]
gi|183179364|ref|ZP_02957575.1| exsB protein [Vibrio cholerae MZO-3]
gi|254286182|ref|ZP_04961142.1| exsB protein [Vibrio cholerae AM-19226]
gi|148875730|gb|EDL73865.1| exsB protein [Vibrio cholerae 623-39]
gi|149741088|gb|EDM55147.1| exsB protein [Vibrio cholerae MZO-2]
gi|150423851|gb|EDN15792.1| exsB protein [Vibrio cholerae AM-19226]
gi|183012775|gb|EDT88075.1| exsB protein [Vibrio cholerae MZO-3]
Length = 231
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA +
Sbjct: 115 ATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC LRQ G +
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|91793370|ref|YP_563021.1| queuosine biosynthesis protein QueC [Shewanella denitrificans
OS217]
gi|123060891|sp|Q12MM8|QUEC_SHEDO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91715372|gb|ABE55298.1| ExsB [Shewanella denitrificans OS217]
Length = 232
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 145/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +FD V ++FDYGQR+ E+E + ++
Sbjct: 4 AVVVFSGGQDSTTCLIQALTQFDEVHAITFDYGQRHNEEIEVAKALASQL---------R 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG
Sbjct: 55 IASHKVMDVSLLNELAISALTRDDIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+++ GVCETD+SGYPDCR +RA+ETA+ LGM+ + + TPLMWL K ETW LA
Sbjct: 115 ANSVITGVCETDFSGYPDCRDQFVRAMETALCLGMDKQINLLTPLMWLNKAETWALADKY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ L+ E + TCY G G GC CPAC+LRQKG ++
Sbjct: 175 HS---LTLVKELTLTCYNGI------IGQGCGDCPACHLRQKGLDDY 212
>gi|261210909|ref|ZP_05925199.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC341]
gi|260839884|gb|EEX66484.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC341]
Length = 231
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 150/233 (64%), Gaps = 21/233 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALQEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR++ ++++ ++ GM+ +T+ TPLMWL K ETW LA +
Sbjct: 115 AKTVITGVCETDFSGYPDCRNEFVQSMNQSLAKGMDMPLTIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
G +LV +++ TCY G G GC CPAC+LR+ G ++ + D
Sbjct: 175 GALELVR---QQTLTCYNGL------IGDGCGECPACHLRKAGLNDYLDNRSD 218
>gi|207092521|ref|ZP_03240308.1| hypothetical protein HpylHP_06375 [Helicobacter pylori
HPKX_438_AG0C1]
gi|207108661|ref|ZP_03242823.1| hypothetical protein HpylH_03964 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 228
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 148/228 (64%), Gaps = 18/228 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IISLDFLENITRSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQTK 224
>gi|118442853|ref|YP_878459.1| exsB protein [Clostridium novyi NT]
gi|189038910|sp|A0Q1F7|QUEC_CLONN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118133309|gb|ABK60353.1| exsB protein [Clostridium novyi NT]
Length = 221
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 147/233 (63%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL W RF V +SFDY Q++K+ELEC +C + I
Sbjct: 8 AIVVFSGGQDSTTCLFWTKKRFKEVIAVSFDYNQKHKLELECAKEICSKYNI-------- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E HIL L +L ++ +SLT+ V ++ +PN+FV GRN++FL F A A +
Sbjct: 60 ----EHHILDLGLLNQLAPNSLTRTDIKVDKNAPEDGVPNSFVDGRNMLFLTFVAVFAKQ 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI++I+ GV ++D+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETWK+A
Sbjct: 116 RGISHIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFVLHTPLMWIDKAETWKMAY 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D G ++++I E+ TCY G + G GC CP+C LR+KG+++FKE Y
Sbjct: 176 DFG---VLDIIKNETLTCYNGIK------GNGCGECPSCKLRKKGYLKFKELY 219
>gi|229521472|ref|ZP_04410891.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TM 11079-80]
gi|229341570|gb|EEO06573.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TM 11079-80]
Length = 231
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA +
Sbjct: 115 ATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC LRQ G +
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|307705448|ref|ZP_07642303.1| queuosine biosynthesis protein queC [Streptococcus mitis SK597]
gi|307620983|gb|EFO00065.1| queuosine biosynthesis protein queC [Streptococcus mitis SK597]
Length = 217
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 145/224 (64%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQ----VAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCEECPACHLRQHG 206
>gi|322377476|ref|ZP_08051967.1| ExsB protein [Streptococcus sp. M334]
gi|321281676|gb|EFX58685.1| ExsB protein [Streptococcus sp. M334]
Length = 217
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 145/224 (64%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQ----VAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ +K ++ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDLEIKQKEGEVPNTFVDGRNHLFLSFAAILAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GMKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|307707094|ref|ZP_07643891.1| queuosine biosynthesis protein queC [Streptococcus mitis SK321]
gi|307617620|gb|EFN96790.1| queuosine biosynthesis protein queC [Streptococcus mitis SK321]
Length = 217
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 145/224 (64%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQ----VAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGECPACHLRQHG 206
>gi|89097394|ref|ZP_01170283.1| aluminum resistance protein [Bacillus sp. NRRL B-14911]
gi|89087690|gb|EAR66802.1| aluminum resistance protein [Bacillus sp. NRRL B-14911]
Length = 218
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 148/234 (63%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA F VE ++FDYGQR+ ELEC R+ +L
Sbjct: 2 KNEKAIVVFSGGQDSTTCLFWAKKNFKEVEAVTFDYGQRHIAELEC---ARRIAADLAI- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ H+L +++L ++ ++LT K++ ++ ++ LP+TFVPGRN++FL FA LA +
Sbjct: 58 ------QHHVLDMSLLNQLAPNALTRKDIKVEEKEGELPSTFVPGRNLLFLSFAGVLASQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ +I+ GVCETD+SGYPDCR ++++ +NL M+S +HTPLMWL K ETWKLA
Sbjct: 112 VAAKHIITGVCETDFSGYPDCRDQFVKSLNVTLNLSMDSQFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V +++ TCY G GC CPAC LR++G ++ + Q
Sbjct: 172 ELGALEYVR---KQTLTCYEGV------IADGCGECPACRLRKRGLEDYLAERQ 216
>gi|217031987|ref|ZP_03437488.1| hypothetical protein HPB128_187g14 [Helicobacter pylori B128]
gi|298736334|ref|YP_003728860.1| hypothetical protein HPB8_839 [Helicobacter pylori B8]
gi|216946297|gb|EEC24903.1| hypothetical protein HPB128_187g14 [Helicobacter pylori B128]
gi|298355524|emb|CBI66396.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 228
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 149/228 (65%), Gaps = 18/228 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYVQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ L L +I+ S+L KN I Q+ +LPN+FVP RN IF+ + A +LG +
Sbjct: 61 -IISLDFLENITRSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQTK 224
>gi|46204970|ref|ZP_00209643.1| COG0603: Predicted PP-loop superfamily ATPase [Magnetospirillum
magnetotacticum MS-1]
Length = 175
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 126/162 (77%)
Query: 79 LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
+A LG+IS ++LT++ + + LPNTFVPGRN+ FL FAA LA+R G+ +IV G+CET
Sbjct: 1 MAALGEISDTALTRDSEIAFAQDGLPNTFVPGRNLAFLTFAAALAFRRGLRHIVGGMCET 60
Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
DYSGYPDCR DTI+A++ A+NLGME +HTPLMWL K +TW LA+++GG+ LV+LI+E
Sbjct: 61 DYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWLDKAQTWSLAEELGGRPLVDLIVE 120
Query: 199 ESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+SHTCYLG+R +R+ WGYGC +CPAC LR KG+ ++ D
Sbjct: 121 DSHTCYLGERGQRHAWGYGCGTCPACDLRAKGFARYRAARTD 162
>gi|229529558|ref|ZP_04418948.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae 12129(1)]
gi|229333332|gb|EEN98818.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae 12129(1)]
Length = 231
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA +
Sbjct: 115 ATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC LRQ G +
Sbjct: 175 GALDLV---CHQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|315613638|ref|ZP_07888545.1| transcription regulator ExsB [Streptococcus sanguinis ATCC 49296]
gi|315314329|gb|EFU62374.1| transcription regulator ExsB [Streptococcus sanguinis ATCC 49296]
Length = 217
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 144/224 (64%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAITFAYGQRHHLEIQ----VAEEIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ LPNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGVRHHILDMSLLGQITENALTSDMEIEQKEGELPNTFVDGRNHLFLSFAAILAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWGLADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|187934812|ref|YP_001886173.1| ExsB protein [Clostridium botulinum B str. Eklund 17B]
gi|187722965|gb|ACD24186.1| ExsB protein [Clostridium botulinum B str. Eklund 17B]
Length = 233
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 148/240 (61%), Gaps = 26/240 (10%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIV 61
I+ A+++FSGGQDS+TCL WA RF V +SFDY Q++K+ELEC +C + +
Sbjct: 11 IVLDKEKAIVVFSGGQDSTTCLFWAKKRFREVIAVSFDYNQKHKLELECARDICKKYDV- 69
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVF 118
E HIL L +L ++ +SLT+ +V + +PN+FV GRN++FL F
Sbjct: 70 -----------EHHILDLNLLNQLAPNSLTRQDISVDKDVPKEGVPNSFVDGRNMLFLTF 118
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A A + G+ I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K
Sbjct: 119 VAVFAKQRGVNTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQFEILTPLMWINKT 178
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
ETWK+A D+G ++N++ EE+ TCY G G GC CPAC LR+ G++EFK++Y
Sbjct: 179 ETWKMANDLG---VLNIVKEETLTCYNG------VIGNGCGKCPACNLRKNGYLEFKKEY 229
>gi|307709656|ref|ZP_07646108.1| queuosine biosynthesis protein queC [Streptococcus mitis SK564]
gi|307619554|gb|EFN98678.1| queuosine biosynthesis protein queC [Streptococcus mitis SK564]
Length = 217
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 144/224 (64%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQ----VAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E + TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---ENTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|210134845|ref|YP_002301284.1| trans-regulatory protein ExsB [Helicobacter pylori P12]
gi|254764351|sp|B6JLM6|QUEC_HELP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|210132813|gb|ACJ07804.1| trans-regulatory protein ExsB [Helicobacter pylori P12]
Length = 228
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 149/231 (64%), Gaps = 18/231 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IISLDFLENITRSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G +++L+++E+HTCY G+R + +GYGC CPAC LR+KG+ EF+ K
Sbjct: 177 LG---VLDLVIKETHTCYQGERRILHAYGYGCGECPACQLRKKGYEEFQAK 224
>gi|153212723|ref|ZP_01948380.1| exsB protein [Vibrio cholerae 1587]
gi|124116373|gb|EAY35193.1| exsB protein [Vibrio cholerae 1587]
Length = 231
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 143/226 (63%), Gaps = 21/226 (9%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++ +
Sbjct: 5 VVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------GV 55
Query: 72 GEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 56 TAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIGA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
T I+ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA +G
Sbjct: 116 TTIITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALADQLG 175
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
DLV ++ TCY G G GC CPAC LRQ G +
Sbjct: 176 ALDLVR---HQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|315645293|ref|ZP_07898418.1| possible aluminum resistance protein [Paenibacillus vortex V453]
gi|315279335|gb|EFU42641.1| possible aluminum resistance protein [Paenibacillus vortex V453]
Length = 223
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 146/230 (63%), Gaps = 20/230 (8%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
KK A+++FSGGQDS+TCL WA+ +FD VE ++F+YGQR+ +E+EC + EL
Sbjct: 3 KKNKKAVVVFSGGQDSTTCLFWAMKQFDEVEAVTFNYGQRHALEIEC---ANQIADELGV 59
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
KW +L +++LG ++ ++LT++ V + D P+TFV GRN +FL FAA A
Sbjct: 60 KWT-------LLDMSLLGQLTQNALTRDDVEIVHNDGEFPSTFVEGRNHLFLSFAAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G +IV GVCETD+SGYPDCR D ++++ +NL M+ + +HTPLMW+ K ETW++A
Sbjct: 113 GVGARHIVTGVCETDFSGYPDCRDDFVKSLNVTLNLAMDHNFIIHTPLMWINKAETWEMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G + V +++ TCY G G GC +CPAC LR+ G F
Sbjct: 173 DQLGAFEFVR---KKTLTCYNGV------IGDGCGNCPACQLRKAGLDTF 213
>gi|167461682|ref|ZP_02326771.1| Aluminum resistance protein [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383446|ref|ZP_08057226.1| pre-queuosine 0 synthase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321152247|gb|EFX45073.1| pre-queuosine 0 synthase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 223
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 150/233 (64%), Gaps = 22/233 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +F VET++FDYGQR+ +E++ V K I E
Sbjct: 2 KQEKAIVVFSGGQDSTTCLFWALRQFGEVETVTFDYGQRHSLEMK----VAKSIAE---- 53
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ S+LT K++A++ ++ P+TFV GRN++FL FAA +A
Sbjct: 54 ---ELGLKHTVLDMSLLNQLAPSALTRKDMAIEEKEGEPPSTFVDGRNMLFLTFAAVMAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TW+LA
Sbjct: 111 QAGARHLVTGVCETDFSGYPDCRDAFIKSLNVTLNLAMDYPFVIHTPLMWLNKAQTWELA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + V E++ TCY G G GC CPAC LR G +++++
Sbjct: 171 DQLGAYEFVK---EKTLTCYNGV------MGSGCGECPACKLRNAGLKQYEQQ 214
>gi|307707499|ref|ZP_07643981.1| ExsB protein [Streptococcus mitis NCTC 12261]
gi|307616451|gb|EFN95642.1| ExsB protein [Streptococcus mitis NCTC 12261]
Length = 217
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 144/224 (64%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKKHYETVEAVTFAYGQRHHLEIQ----VAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|311030028|ref|ZP_07708118.1| aluminum resistance protein [Bacillus sp. m3-13]
gi|311032348|ref|ZP_07710438.1| aluminum resistance protein [Bacillus sp. m3-13]
Length = 223
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 149/228 (65%), Gaps = 22/228 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ A+++FSGGQDS+TCL WA+ FD VE ++F YGQR+++E++C + K+
Sbjct: 1 MKQKEKAMVVFSGGQDSTTCLIWAMKEFDEVEAVTFHYGQRHELEIDCATSIAKE----- 55
Query: 65 PKWKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
LG H IL +++LG ++ ++LT+ N+ ++ ++ LP+TFV GRN++FL FAA
Sbjct: 56 ------LGVKHRILDMSLLGQLTPNALTRDNIEIEEKEGELPSTFVDGRNLLFLSFAAVA 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW+
Sbjct: 110 AKQIGARHIVTGVCETDFSGYPDCRDVFIKSMNVTLNLSMDYPFVIHTPLMWLNKEETWE 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
LA D+ D ++ + ++ TCY G GC CPAC LR++G
Sbjct: 170 LADDL---DALDFVRTKTLTCYNGV------IADGCGECPACKLRKRG 208
>gi|255525615|ref|ZP_05392549.1| exsB protein [Clostridium carboxidivorans P7]
gi|296185502|ref|ZP_06853912.1| ExsB protein [Clostridium carboxidivorans P7]
gi|255510705|gb|EET87011.1| exsB protein [Clostridium carboxidivorans P7]
gi|296050336|gb|EFG89760.1| ExsB protein [Clostridium carboxidivorans P7]
Length = 222
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 142/231 (61%), Gaps = 22/231 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA +F V +SFDY Q++K+ELEC + KK
Sbjct: 6 AVVVFSGGQDSTTCLFWAKKKFKEVIAVSFDYNQKHKLELECAKSICKKYNV-------- 57
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E HIL L +L ++ +SLT+ V ++ LPN+FV GRN++FL F A A +
Sbjct: 58 --EHHILDLNLLNQLAPNSLTRQDIKVDKEVPSGGLPNSFVDGRNMLFLTFVAVFAKQRD 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I NI+ GV ++D+SGYPDCR I+++ +NL M+ ++TPLMW+ K ETWK+A D+
Sbjct: 116 INNIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQFDIYTPLMWINKAETWKMAYDL 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+V E+ TCY G + G GC CPAC LR+ G++EFK KY
Sbjct: 176 SVLDIVK---NETLTCYNGIK------GNGCGECPACRLRKNGYLEFKNKY 217
>gi|229523532|ref|ZP_04412937.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae bv. albensis
VL426]
gi|229337113|gb|EEO02130.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae bv. albensis
VL426]
Length = 231
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 145/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA +
Sbjct: 115 ATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G ++L+ ++ TCY G G GC CPAC LRQ G +
Sbjct: 175 GA---LHLVRHQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|208434560|ref|YP_002266226.1| ExsB trans-regulatory protein [Helicobacter pylori G27]
gi|254764352|sp|B5Z711|QUEC_HELPG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|208432489|gb|ACI27360.1| ExsB trans-regulatory protein [Helicobacter pylori G27]
Length = 226
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 147/226 (65%), Gaps = 18/226 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IISLDFLENITRSALFKNSNDLMGYSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQ 222
>gi|15896861|ref|NP_350210.1| PP-loop superfamily ATPase [Clostridium acetobutylicum ATCC 824]
gi|81529172|sp|Q97D53|QUEC_CLOAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|15026727|gb|AAK81550.1|AE007858_11 PP-loop superfamily ATPase, confers aluminum resistance
[Clostridium acetobutylicum ATCC 824]
gi|325511035|gb|ADZ22671.1| PP-loop superfamily ATPase, confers aluminum resistance
[Clostridium acetobutylicum EA 2018]
Length = 222
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 146/235 (62%), Gaps = 28/235 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
AL++FSGGQDS+TCL WA R+ V +SFDY Q++K+ELEC +C + +
Sbjct: 10 ALVVFSGGQDSTTCLFWAKKRYKEVVAVSFDYNQKHKLELECAKDICKKHGV-------- 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATLAY 124
E HIL + +L ++ +SLT+ MK+ ++ PNTFV GRN++FL FAA A
Sbjct: 62 ----EHHILDMKLLNQLAPNSLTR-ADMKVDEDAPKDGPPNTFVDGRNLLFLSFAAVFAK 116
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI NI+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWKLA
Sbjct: 117 QRGINNIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQFVLITPLMWIDKAETWKLA 176
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D+G D+V E+ TCY G + G GC CPAC LR+ G++EFK Y+
Sbjct: 177 DDLGVLDIVK---NETLTCYNGIK------GNGCGECPACKLRKNGYVEFKRLYK 222
>gi|149191046|ref|ZP_01869306.1| predicted aluminum resistance protein [Vibrio shilonii AK1]
gi|148835074|gb|EDL52051.1| predicted aluminum resistance protein [Vibrio shilonii AK1]
Length = 228
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 147/230 (63%), Gaps = 21/230 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+++D V ++FDYGQR+K+E+E + K+ +
Sbjct: 4 AVVVFSGGQDSTTCLVQALEQYDEVHAITFDYGQRHKLEIEVAEALANKL---------N 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVSLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D I+A+ +A+ GM+ + TPLMWL K ETW LA
Sbjct: 115 AQAVITGVCETDFSGYPDCRNDFIKALNSALVQGMDREFDIVTPLMWLDKAETWALADKF 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++LI EE+ TCY G G GC CP+C LR G + E
Sbjct: 175 NA---LSLIREETLTCYNGV------IGDGCGDCPSCDLRANGLNHYLEN 215
>gi|323491405|ref|ZP_08096590.1| queuosine biosynthesis protein QueC [Vibrio brasiliensis LMG 20546]
gi|323314531|gb|EGA67610.1| queuosine biosynthesis protein QueC [Vibrio brasiliensis LMG 20546]
Length = 228
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 147/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKQYDEVHAITFDYGQRHKLEIEVAQSLAKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ +Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVSLLNELAISSLTRDDIPVSHDLQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 AKTVITGVCETDFSGYPDCRNDFVKAMNSALEQGMDYQLEIATPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D + L+ E++ TCY G G GC CP+C LR+ G ++
Sbjct: 175 ---DALQLVREKTLTCYNGV------IGDGCGDCPSCELRKVGLNDY 212
>gi|153836122|ref|ZP_01988789.1| ExsB protein [Vibrio parahaemolyticus AQ3810]
gi|149750397|gb|EDM61142.1| ExsB protein [Vibrio parahaemolyticus AQ3810]
Length = 232
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 147/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + +KI + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIE----IAQKIAKDL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR D ++++ TA+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 115 ADTVITGVCETDFSGYPDCRDDFVKSMNTALAKGMDRALTIKTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ + L+ E + TCY G G GC CP+C LR+ G E+
Sbjct: 175 ---NALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDEY 212
>gi|328468976|gb|EGF39936.1| queuosine biosynthesis protein QueC [Vibrio parahaemolyticus 10329]
Length = 232
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 146/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V +KI + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIE----VAQKIAKDL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR D ++++ TA+ GME +T+ TPLMWL K ETW LA
Sbjct: 115 ADTVITGVCETDFSGYPDCRDDFVKSMNTALVKGMERALTIKTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ L+ E + TCY G G GC CP+C LR+ G ++
Sbjct: 175 NA---LQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDDY 212
>gi|28898412|ref|NP_798017.1| queuosine biosynthesis protein QueC [Vibrio parahaemolyticus RIMD
2210633]
gi|260365145|ref|ZP_05777716.1| protein ExsB [Vibrio parahaemolyticus K5030]
gi|260876574|ref|ZP_05888929.1| protein ExsB [Vibrio parahaemolyticus AN-5034]
gi|260895067|ref|ZP_05903563.1| protein ExsB [Vibrio parahaemolyticus Peru-466]
gi|260900923|ref|ZP_05909318.1| protein ExsB [Vibrio parahaemolyticus AQ4037]
gi|81727639|sp|Q87P80|QUEC_VIBPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|28806629|dbj|BAC59901.1| exsB protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308086022|gb|EFO35717.1| protein ExsB [Vibrio parahaemolyticus Peru-466]
gi|308093579|gb|EFO43274.1| protein ExsB [Vibrio parahaemolyticus AN-5034]
gi|308110776|gb|EFO48316.1| protein ExsB [Vibrio parahaemolyticus AQ4037]
gi|308111509|gb|EFO49049.1| protein ExsB [Vibrio parahaemolyticus K5030]
Length = 232
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 146/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V +KI + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIE----VAQKIAKDL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR D ++++ TA+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 115 ADTVITGVCETDFSGYPDCRDDFVKSMNTALVKGMDRALTIKTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ L+ E + TCY G G GC CP+C LR+ G E+
Sbjct: 175 NA---LQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDEY 212
>gi|121588012|ref|ZP_01677764.1| exsB protein [Vibrio cholerae 2740-80]
gi|121547753|gb|EAX57844.1| exsB protein [Vibrio cholerae 2740-80]
Length = 231
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDY QR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYSQRHKLEIEVAQQLAKQL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA +
Sbjct: 115 ATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALADQL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV ++ TCY G G GC CPAC LRQ G +
Sbjct: 175 GALDLVR---HQTLTCYNGL------IGDGCGECPACGLRQAGLKAY 212
>gi|308049940|ref|YP_003913506.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
gi|307632130|gb|ADN76432.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
Length = 233
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 146/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+ E+E + EL K
Sbjct: 7 AVVVFSGGQDSTTCLVQALTHYDEVHAITFDYGQRHAQEIEV---AKTLATELGVKAH-- 61
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ +++LG+++ S+LT++ VA ++ DN LPNTFVPGRNI+FL A AY++G
Sbjct: 62 ----KVMDVSLLGELAISALTRDNIAVANELMDNGLPNTFVPGRNILFLTLAGIYAYQVG 117
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR++ ++A+E A+ LGM+ +T+ TPLMWL K +TW LA
Sbjct: 118 AQTVITGVCETDFSGYPDCRNEFVQALEKALVLGMDRPLTLATPLMWLDKAQTWALADHY 177
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G +LV + + TCY G G GC +CPAC LR +G ++
Sbjct: 178 GTLELVR---DRTLTCYNGV------LGAGCGTCPACQLRARGLEQY 215
>gi|153833106|ref|ZP_01985773.1| ExsB protein [Vibrio harveyi HY01]
gi|156974666|ref|YP_001445573.1| queuosine biosynthesis protein QueC [Vibrio harveyi ATCC BAA-1116]
gi|167016455|sp|A7MW43|QUEC_VIBHB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148870674|gb|EDL69581.1| ExsB protein [Vibrio harveyi HY01]
gi|156526260|gb|ABU71346.1| hypothetical protein VIBHAR_02384 [Vibrio harveyi ATCC BAA-1116]
Length = 232
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 142/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V K +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAEKVAKDL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR D ++A+ +A+ GM+ + TPLMWL K ETW LA
Sbjct: 115 AETVITGVCETDFSGYPDCRDDFVKAMNSALVKGMDRQFEIKTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D + L+ E + TCY G G GC CP+C LR+ G ++
Sbjct: 175 ---DALQLVRESTLTCYNGI------IGDGCGDCPSCDLRKAGLDDY 212
>gi|163752022|ref|ZP_02159231.1| exsB protein [Shewanella benthica KT99]
gi|161328074|gb|EDP99243.1| exsB protein [Shewanella benthica KT99]
Length = 231
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 142/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+++D V ++FDYGQR+ E+E + K++
Sbjct: 4 AVIVFSGGQDSTTCLIQALEQYDEVHGITFDYGQRHSQEIEVAKELGKRL---------D 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L +L + +L +++ S+LT++ V+ + DN LPNTFVPGRNI+FL A AY+LG
Sbjct: 55 LASHKVLDVTMLNELAISALTRDDIAVSNTLMDNGLPNTFVPGRNILFLTLAGIFAYQLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETDYSGYPDCR D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 AEAVITGVCETDYSGYPDCRDDFVKAMASALVQGMDRQLELVTPLMWLNKAETWALADKY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
DLV +E+ TCY G GC +CPAC LRQ G ++
Sbjct: 175 NSLDLVR---DETLTCY------NDIIGSGCGTCPACLLRQTGLDDY 212
>gi|37679725|ref|NP_934334.1| queuosine biosynthesis protein QueC [Vibrio vulnificus YJ016]
gi|81757651|sp|Q7ML86|QUEC_VIBVY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|37198470|dbj|BAC94305.1| predicted ATPase [Vibrio vulnificus YJ016]
Length = 232
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 147/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+ FD V ++FDYGQR+++E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVKALNEFDEVHAITFDYGQRHRLEIEVAQNLAKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ GVCETD+SGYPDCR D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 AETIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKPLVIQTPLMWLNKAETWALADQ- 173
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ + L+ E++ TCY G G GC CP+C+LR+ G ++
Sbjct: 174 --NNALQLVREKTLTCYNGI------VGDGCGDCPSCHLRKVGLNDY 212
>gi|218709346|ref|YP_002416967.1| queuosine biosynthesis protein [Vibrio splendidus LGP32]
gi|218322365|emb|CAV18513.1| Queuosine biosynthesis protein [Vibrio splendidus LGP32]
Length = 218
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 146/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL AL+ +D V ++FDYGQR+ E++ + + K++ +
Sbjct: 6 ALVVFSGGQDSTTCLIDALNTYDEVHAITFDYGQRHSNEIDVAVSIGKEL---------N 56
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ +L + + +++ SSLT++ V+ ++ +N+LPNTFVPGRNI+FL +A AY+LG
Sbjct: 57 VKSHKVLDVTAINELAISSLTRDNIPVSNELSNNDLPNTFVPGRNIVFLTYACIHAYQLG 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +IV GVCETD+SGYPDCR IRA+ + NLGM++ + TPLMWL K ETW+LA
Sbjct: 117 IKDIVTGVCETDFSGYPDCRDTFIRALNLSCNLGMDNAFNIKTPLMWLNKAETWELADK- 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ + + + + TCY G G GC CPAC LRQ G E+
Sbjct: 176 --HNKLEYVEKNTLTCYNGI------LGKGCGECPACLLRQNGLKEY 214
>gi|320156524|ref|YP_004188903.1| queuosine Biosynthesis QueC ATPase [Vibrio vulnificus MO6-24/O]
gi|319931836|gb|ADV86700.1| queuosine Biosynthesis QueC ATPase [Vibrio vulnificus MO6-24/O]
Length = 231
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 147/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+ FD V ++FDYGQR+++E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVKALNEFDEVHAITFDYGQRHRLEIEVAQNLAKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ GVCETD+SGYPDCR D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 AQTIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKPLVIQTPLMWLNKAETWALADQ- 173
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ + L+ E++ TCY G G GC CP+C+LR+ G ++
Sbjct: 174 --NNALQLVREKTLTCYNGI------IGDGCGDCPSCHLRKVGLNDY 212
>gi|293365936|ref|ZP_06612639.1| transcription regulator ExsB [Streptococcus oralis ATCC 35037]
gi|307702339|ref|ZP_07639297.1| queuosine biosynthesis protein queC [Streptococcus oralis ATCC
35037]
gi|291315614|gb|EFE56064.1| transcription regulator ExsB [Streptococcus oralis ATCC 35037]
gi|307624142|gb|EFO03121.1| queuosine biosynthesis protein queC [Streptococcus oralis ATCC
35037]
Length = 217
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 144/224 (64%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFSYGQRHHLEIQ----VAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIQDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKSETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ D + + E + TCY G G GC CPAC+LRQ G
Sbjct: 172 L---DAFDYVRERTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|27366010|ref|NP_761538.1| queuosine biosynthesis protein QueC [Vibrio vulnificus CMCP6]
gi|81447969|sp|Q8D985|QUEC_VIBVU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|27362210|gb|AAO11065.1| Queuosine Biosynthesis QueC ATPase [Vibrio vulnificus CMCP6]
Length = 231
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 147/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+ FD V ++FDYGQR+++E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVKALNEFDEVHAITFDYGQRHRLEIEVAQNLAKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ GVCETD+SGYPDCR D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 AQTIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKPLVIQTPLMWLNKTETWALADQ- 173
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ + L+ E++ TCY G G GC CP+C+LR+ G ++
Sbjct: 174 --NNALQLVREKTLTCYNGI------IGDGCGDCPSCHLRKVGLNDY 212
>gi|126090178|ref|YP_001041659.1| queuosine biosynthesis protein QueC [Shewanella baltica OS155]
gi|126174471|ref|YP_001050620.1| queuosine biosynthesis protein QueC [Shewanella baltica OS155]
gi|217973440|ref|YP_002358191.1| queuosine biosynthesis protein QueC [Shewanella baltica OS223]
gi|254764383|sp|B8E544|QUEC_SHEB2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|125997676|gb|ABN61751.1| exsB protein [Shewanella baltica OS155]
gi|125999834|gb|ABN63904.1| hypothetical protein Sbal_4541 [Shewanella baltica OS155]
gi|217498575|gb|ACK46768.1| exsB protein [Shewanella baltica OS223]
Length = 240
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 147/232 (63%), Gaps = 21/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 11 ASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL------- 63
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY
Sbjct: 64 --KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAY 121
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+LG I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 122 QLGAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALA 181
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
DLV + TCY G G GC CPAC+LR++G E+ +
Sbjct: 182 DKYQQLDLVR---HHTLTCYNGV------IGDGCGDCPACHLRKRGLDEYMQ 224
>gi|163815378|ref|ZP_02206753.1| hypothetical protein COPEUT_01543 [Coprococcus eutactus ATCC 27759]
gi|158449352|gb|EDP26347.1| hypothetical protein COPEUT_01543 [Coprococcus eutactus ATCC 27759]
Length = 230
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 155/243 (63%), Gaps = 29/243 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K A+++FSGGQDS+TCL WAL ++ +V +SFDYGQR+ +ELEC +
Sbjct: 9 LKNKDEAVVVFSGGQDSTTCLLWALKKYKKVYAVSFDYGQRHALELECAREI-------- 60
Query: 65 PKWKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFA 119
D G E HIL +++L ++ +SLT+ MK+ +N PN+FV GRN++FL F
Sbjct: 61 ---ADKFGVEHHILDMSLLNQLAPNSLTR-TDMKVDENAPDEGTPNSFVDGRNMVFLTFV 116
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A + GI++I+ GV ++D+SGYPDCR I+++ T +NL M+ + TPLMW+ K E
Sbjct: 117 AIFAKQRGISDIITGVSQSDFSGYPDCRDIFIKSLNTTLNLAMDYEFDIITPLMWIDKME 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
TWK+A ++GG D++ + + TCY G + G GC CP+C LR+KG +M++KE
Sbjct: 177 TWKMADELGGLDVIR---DMTLTCYNGIK------GEGCGHCPSCKLRKKGYDLYMKYKE 227
Query: 237 KYQ 239
+++
Sbjct: 228 EHK 230
>gi|317012455|gb|ADU83063.1| trans-regulatory protein ExsB [Helicobacter pylori Lithuania75]
Length = 228
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 147/228 (64%), Gaps = 18/228 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A +LG +
Sbjct: 61 -IISLDFLENITRSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEYFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQTK 224
>gi|319652976|ref|ZP_08007081.1| aluminum resistance protein [Bacillus sp. 2_A_57_CT2]
gi|317395325|gb|EFV76058.1| aluminum resistance protein [Bacillus sp. 2_A_57_CT2]
Length = 219
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 146/228 (64%), Gaps = 25/228 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K AL++FSGGQDS+TCL WA +RF+ VE ++F+Y QR+K+E+EC + K+
Sbjct: 2 KNDKALVVFSGGQDSTTCLFWAKERFEEVEAVTFNYNQRHKLEIECAQQIAKE------- 54
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATL 122
LG HIL +++L ++ ++LT++ +K++D LP+TFVPGRN++FL FA L
Sbjct: 55 ----LGIRHHILDMSLLNQLAPNALTRD-EIKVKDGEEGGLPSTFVPGRNLLFLSFAGVL 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++ +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWK
Sbjct: 110 ASQINAKHIITGVCETDFSGYPDCRDIFIKSLNVTLNLSMDEQFVIHTPLMWLNKAETWK 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
LA ++ D V E++ TCY G GC CPAC+LR+ G
Sbjct: 170 LADELNALDYVR---EKTLTCYNGIP------ADGCGECPACHLRKNG 208
>gi|226314168|ref|YP_002774064.1| queuosine biosynthesis protein [Brevibacillus brevis NBRC 100599]
gi|226097118|dbj|BAH45560.1| queuosine biosynthesis protein [Brevibacillus brevis NBRC 100599]
Length = 223
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 146/227 (64%), Gaps = 20/227 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA ++F VETL+FDYGQR+K+E+EC ++ EL
Sbjct: 1 MMKKEKAVVVFSGGQDSTTCLFWAKEQFGEVETLTFDYGQRHKLEIEC---AQQIAAELG 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K + +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA A
Sbjct: 58 VK-------NSVLDMSLLNQLAPNALTRTDIDITQEEGQLPSTFVDGRNLLFLSFAGVFA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TWKL
Sbjct: 111 KQRGARHLITGVCETDFSGYPDCRDAFIKSLNVTLNLSMDYPFVIHTPLMWLNKAQTWKL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
A D+G I E + TCY G + G GC CPAC+LR+ G
Sbjct: 171 ADDLGA---FTYIRENTLTCYNGIK------GDGCGECPACHLRKAG 208
>gi|295093083|emb|CBK82174.1| preQ(0) biosynthesis protein QueC [Coprococcus sp. ART55/1]
Length = 225
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 155/243 (63%), Gaps = 29/243 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K A+++FSGGQDS+TCL WAL ++ +V +SFDYGQR+ +ELEC K+I
Sbjct: 4 LKNKDEAVVVFSGGQDSTTCLLWALKKYKKVYAVSFDYGQRHALELECA----KEIA--- 56
Query: 65 PKWKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFA 119
D G E HIL + +L ++ +SLT+ MK+ +N PN+FV GRN++FL F
Sbjct: 57 ----DKFGVEHHILDMGLLNQLAPNSLTR-TDMKVDENAPDEGTPNSFVDGRNMVFLTFV 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A + GI++I+ GV ++D+SGYPDCR I+++ T +NL M+ + TPLMW+ K E
Sbjct: 112 AIFAKQRGISDIITGVSQSDFSGYPDCRDIFIKSLNTTLNLAMDYEFDIITPLMWIDKME 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
TWK+A ++GG D++ + + TCY G + G GC CP+C LR+KG +M++KE
Sbjct: 172 TWKMADELGGLDVIR---DMTLTCYNGIK------GEGCGHCPSCKLRKKGYDLYMKYKE 222
Query: 237 KYQ 239
++
Sbjct: 223 DHK 225
>gi|261252910|ref|ZP_05945483.1| queuosine Biosynthesis QueC ATPase [Vibrio orientalis CIP 102891]
gi|260936301|gb|EEX92290.1| queuosine Biosynthesis QueC ATPase [Vibrio orientalis CIP 102891]
Length = 232
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 145/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQSLAKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+++ GVCETD+SGYPDCR+D ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 AQSVITGVCETDFSGYPDCRNDFVKAMNRALVQGMDRDLEIATPLMWLDKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D + L+ E++ TCY G G GC CP+C LR+ G +
Sbjct: 175 ---DALQLVREKTLTCYNGI------IGDGCGDCPSCDLRKVGLNSY 212
>gi|288556799|ref|YP_003428734.1| Queuosine biosynthesis protein QueC [Bacillus pseudofirmus OF4]
gi|288547959|gb|ADC51842.1| Queuosine biosynthesis protein QueC [Bacillus pseudofirmus OF4]
Length = 222
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 144/226 (63%), Gaps = 21/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F V T++FDYGQR+ E+EC RK EL
Sbjct: 2 KQDKAVVVFSGGQDSTTCLFWALKEFKEVATVTFDYGQRHSKEIEC---ARKIADELGVS 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAY 124
+ H+L + +L +S ++LT+ ++ ++ D+ LP+TFV GRN++FL FAA
Sbjct: 59 F-------HVLDMGLLNQLSPNALTRADIEVEAGDDGELPSTFVEGRNLLFLSFAAIYGK 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLMWL K +TWKLA
Sbjct: 112 QIGAKHIITGVCETDFSGYPDCRDIFVKSLNVTLNLSMDDQFVIHTPLMWLNKEQTWKLA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D+G ++ + E++ TCY G G GC CPAC LR+KG
Sbjct: 172 DDLGA---LSFVREKTLTCYNGI------IGDGCGECPACVLRKKG 208
>gi|260778538|ref|ZP_05887430.1| queuosine Biosynthesis QueC ATPase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260604702|gb|EEX30997.1| queuosine Biosynthesis QueC ATPase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 231
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 147/227 (64%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKNYDEVHAITFDYGQRHKLEIEVAQDLAKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ ++ + TPLMWL K ETW LA
Sbjct: 115 AQAVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDRNLDIVTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D + L+ E++ TCY G G GC CPAC LR+ G ++
Sbjct: 175 ---DALQLVREKTLTCYNGI------IGDGCGDCPACDLRKAGLNDY 212
>gi|150017399|ref|YP_001309653.1| exsB protein [Clostridium beijerinckii NCIMB 8052]
gi|189038906|sp|A6LWG7|QUEC_CLOB8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|149903864|gb|ABR34697.1| exsB protein [Clostridium beijerinckii NCIMB 8052]
Length = 217
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 147/233 (63%), Gaps = 23/233 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WAL FD V ++FDY Q+++ E+EC + K+
Sbjct: 5 AVVVFSGGQDSTTCLFWALKEFDEVIAVTFDYNQKHRKEIECATSIAKE----------- 53
Query: 71 LG-EDHILPLAILGDISHSSLTKN-VAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
LG E HIL + +L ++ ++LT+N + +K +N +LP+TFV GRN++FL FA LA G
Sbjct: 54 LGIEHHILDMGLLNQLAPNALTRNDIEIKAGENGSLPSTFVEGRNMLFLTFAGVLAKVKG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+IV GVCETD+SGYPDCR I+++ +NL M+ + VHTPLMW+ K ETWK+A D
Sbjct: 114 AKHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYNFVVHTPLMWIDKAETWKMADDF 173
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
G D I E++ TCY G G GC CPAC LR+ G ++ E ++
Sbjct: 174 GKLD---YIREKTLTCYKGIV------GDGCGECPACKLRKNGLDKYLESKKN 217
>gi|163800818|ref|ZP_02194718.1| exsB protein [Vibrio sp. AND4]
gi|159175167|gb|EDP59964.1| exsB protein [Vibrio sp. AND4]
Length = 232
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V +K+ + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIE----VAEKVAQDL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ +Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVGLLNELAISSLTRDDIPVSHDLQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR D ++A+ +A+ GM+ + TPLMWL K ETW LA
Sbjct: 115 AETVITGVCETDFSGYPDCRDDFVKAMNSALVKGMDRQFEIKTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D + L+ E + TCY G G GC CP+C LR+ G ++
Sbjct: 175 ---DALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDDY 212
>gi|323497329|ref|ZP_08102347.1| queuosine biosynthesis protein QueC [Vibrio sinaloensis DSM 21326]
gi|323317412|gb|EGA70405.1| queuosine biosynthesis protein QueC [Vibrio sinaloensis DSM 21326]
Length = 235
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHKLEIEVAQSLAKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++QDN LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVGLLNELAISSLTRDDIPVSHELQDNGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + +++I ++ LGM+ + TPLMWL K ETW LA
Sbjct: 115 AQAVITGVCETDFSGYPDCRDEFVKSINRSLVLGMDRQFEIETPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D + L+ E++ TCY G G GC CP+C LR+ G ++
Sbjct: 175 ---DALQLVREKTLTCYNGI------IGDGCGDCPSCELRKVGLSDY 212
>gi|317129079|ref|YP_004095361.1| exsB protein [Bacillus cellulosilyticus DSM 2522]
gi|315474027|gb|ADU30630.1| exsB protein [Bacillus cellulosilyticus DSM 2522]
Length = 218
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 145/227 (63%), Gaps = 23/227 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-ELMPKWKD 69
+++FSGGQDS+TCL WAL ++D VE ++FDY QR+ E++ V K+I EL K
Sbjct: 6 VIVVFSGGQDSTTCLFWALKKYDEVEAVTFDYHQRHSEEIQ----VAKEITSELKVK--- 58
Query: 70 SLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
HIL +++L ++ S+LT+ V + LP+TFVPGRN+IFL FA LA ++G
Sbjct: 59 ----HHILDMSLLNQLAPSALTREEIVVKDGEAGGLPSTFVPGRNLIFLSFATILARQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+IV GVCETD+SGYPDCR I+++ ++NL M+ +HTPLMWL K ETWKLA D+
Sbjct: 115 AKHIVTGVCETDFSGYPDCRDVFIKSLNVSLNLSMDDQFVIHTPLMWLDKSETWKLADDL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ + +++ TCY G R G GC CPAC LR+KG ++
Sbjct: 175 HA---LQYVRDKTLTCYNGIR------GDGCGDCPACKLRKKGLEKY 212
>gi|299541809|ref|ZP_07052132.1| queuosine biosynthesis protein [Lysinibacillus fusiformis ZC1]
gi|298725547|gb|EFI66188.1| queuosine biosynthesis protein [Lysinibacillus fusiformis ZC1]
Length = 219
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 147/232 (63%), Gaps = 25/232 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +RF+ +E ++FDYGQR+++E++C K I E
Sbjct: 2 KKEKAIVVFSGGQDSTTCLFWAKERFEEIEAVTFDYGQRHRLEIDCA----KVITE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATL 122
LG + HIL +++L ++ ++LT+ +K++D LP+TFVPGRN++FL FA L
Sbjct: 54 ---ELGIKHHILDMSLLNQLAPNALTRQ-DIKVKDGENGELPSTFVPGRNLLFLSFAGVL 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++G +IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K +TW+
Sbjct: 110 ASQVGAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSMDDSFVIDTPLMWLNKAQTWE 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LA +G + V E + TCY G GC CPAC LR KG E+
Sbjct: 170 LADQLGALEFVR---ERTLTCYNGV------IADGCGECPACKLRNKGLDEY 212
>gi|229917716|ref|YP_002886362.1| exsB protein [Exiguobacterium sp. AT1b]
gi|259551529|sp|C4L0V4|QUEC_EXISA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|229469145|gb|ACQ70917.1| exsB protein [Exiguobacterium sp. AT1b]
Length = 214
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 142/226 (62%), Gaps = 20/226 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL WA +F VE ++F YGQR+ E+E V K+I +
Sbjct: 6 ALVVFSGGQDSTTCLFWAKQQFSHVEAVTFAYGQRHDAEIE----VAKEIAAELDV---- 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
HIL L++LG ++ ++LT++ + I + ++PNTFV GRN +FL FAA +A +LG+ +
Sbjct: 58 --PHHILDLSLLGQLTSNALTRH-DLDIDNADVPNTFVDGRNHLFLSFAAVMAKQLGMHH 114
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW LA ++G
Sbjct: 115 IVTGVCETDFSGYPDCRDQFIKSLNVTLNLAMDYPFVIDTPLMWLDKKETWALADELGAF 174
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
D V E + TCY G G GC CPAC LRQ G ++E
Sbjct: 175 DYVK---ERTLTCYNGV------IGSGCGECPACKLRQNGLTAYEE 211
>gi|138894533|ref|YP_001124986.1| aluminum resistance protein [Geobacillus thermodenitrificans
NG80-2]
gi|134266046|gb|ABO66241.1| Aluminum resistance protein [Geobacillus thermodenitrificans
NG80-2]
Length = 223
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 143/226 (63%), Gaps = 22/226 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E +E+ D
Sbjct: 8 AVVVFSGGQDSTTCLFWAKKQFAEVEAVTFDYGQRHRRE-----------IEVAASIADE 56
Query: 71 LGEDH-ILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L +++LG ++ ++LT+ +A++ ++ LP TFV GRN++FL FAA LA + G
Sbjct: 57 LGVRHTVLDMSLLGQLAPNALTRGEIAIEQKEGELPTTFVDGRNLLFLSFAAVLAKQRGA 116
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA ++G
Sbjct: 117 RHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYPFVIHTPLMWLTKAETWKLADELG 176
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ V ++ TCY G GC CPAC LR++G E+
Sbjct: 177 ALEFVR---TKTLTCYNGV------IADGCGECPACVLRKRGLEEY 213
>gi|304408668|ref|ZP_07390289.1| exsB protein [Shewanella baltica OS183]
gi|307305497|ref|ZP_07585245.1| exsB protein [Shewanella baltica BA175]
gi|304352489|gb|EFM16886.1| exsB protein [Shewanella baltica OS183]
gi|306911800|gb|EFN42225.1| exsB protein [Shewanella baltica BA175]
Length = 249
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 146/230 (63%), Gaps = 21/230 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 20 ASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL------- 72
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY
Sbjct: 73 --KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAY 130
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+LG I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 131 QLGAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALA 190
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
DLV + TCY G G GC CPAC+LR++G ++
Sbjct: 191 DKYQQLDLVR---HHTLTCYNGV------IGDGCGDCPACHLRKRGLDDY 231
>gi|323465119|gb|ADX77272.1| queuosine biosynthesis protein QueC [Staphylococcus
pseudintermedius ED99]
Length = 222
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 140/224 (62%), Gaps = 19/224 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V K+I E D
Sbjct: 10 ALVVFSGGQDSTTCLFYAKKHFKEVELVTFEYGQRHAKEIE----VAKEIAE------DQ 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ H+L +A+L ++ ++LT + N++PNTFVP RN++FL FA LAY++G +
Sbjct: 60 GLKHHVLDMALLSQLTPNALTSHDMTIDSHNDVPNTFVPARNLLFLSFAGALAYQIGAKH 119
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW L+ D+G
Sbjct: 120 LITGVCETDFSGYPDCRDSFIKSMNVTLNLAMDRDFVIHTPLMWLNKKETWALSDDLGVL 179
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V + + TCY G GC CPAC LRQ+G ++
Sbjct: 180 DYVR---DRTLTCYNGI------IAEGCGECPACQLRQRGLNQY 214
>gi|189039054|sp|A4ILN7|QUEC_GEOTN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 221
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 143/226 (63%), Gaps = 22/226 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E +E+ D
Sbjct: 6 AVVVFSGGQDSTTCLFWAKKQFAEVEAVTFDYGQRHRRE-----------IEVAASIADE 54
Query: 71 LGEDH-ILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L +++LG ++ ++LT+ +A++ ++ LP TFV GRN++FL FAA LA + G
Sbjct: 55 LGVRHTVLDMSLLGQLAPNALTRGEIAIEQKEGELPTTFVDGRNLLFLSFAAVLAKQRGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA ++G
Sbjct: 115 RHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYPFVIHTPLMWLTKAETWKLADELG 174
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ V ++ TCY G GC CPAC LR++G E+
Sbjct: 175 ALEFVR---TKTLTCYNGV------IADGCGECPACVLRKRGLEEY 211
>gi|153000639|ref|YP_001366320.1| queuosine biosynthesis protein QueC [Shewanella baltica OS185]
gi|189029311|sp|A6WN68|QUEC_SHEB8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151365257|gb|ABS08257.1| exsB protein [Shewanella baltica OS185]
Length = 240
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 146/230 (63%), Gaps = 21/230 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 11 ASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL------- 63
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY
Sbjct: 64 --KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAY 121
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+LG I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 122 QLGAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALA 181
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
DLV + TCY G G GC CPAC+LR++G ++
Sbjct: 182 DKYQQLDLVR---HHTLTCYNGV------IGDGCGDCPACHLRKRGLDDY 222
>gi|297584922|ref|YP_003700702.1| exsB protein [Bacillus selenitireducens MLS10]
gi|297143379|gb|ADI00137.1| exsB protein [Bacillus selenitireducens MLS10]
Length = 219
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 142/222 (63%), Gaps = 22/222 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL WAL+RF VET++FDY QR+ E+E + K+
Sbjct: 7 ALVVFSGGQDSTTCLFWALERFKEVETVTFDYHQRHSQEIEVAEGIAKE----------- 55
Query: 71 LG-EDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG ++ +L L++L +S ++LT+ ++A++ +D LP+TFVPGRN +FL FA +A +G
Sbjct: 56 LGVKNTVLDLSLLNQLSANALTRSDIAIEQKDRELPSTFVPGRNHLFLSFAGVMAKSMGA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW LA ++G
Sbjct: 116 KHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDDTFVIDTPLMWLNKKETWALADELG 175
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D V E++ TCY G GC CPAC LR+ G
Sbjct: 176 ALDFVR---EKTLTCYNGI------LADGCGECPACELRKNG 208
>gi|270293085|ref|ZP_06199296.1| ExsB protein [Streptococcus sp. M143]
gi|270279064|gb|EFA24910.1| ExsB protein [Streptococcus sp. M143]
Length = 217
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 143/224 (63%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + + VE ++F YGQR+ +E++ V ++I
Sbjct: 2 KRHSALVVFSGGQDSTTCLFWAKEHYKTVEAVTFAYGQRHHLEIQ----VAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 53 -KEQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 DIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D V E++ TCY G G GC CPAC+LRQ G
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHG 206
>gi|160875274|ref|YP_001554590.1| queuosine biosynthesis protein QueC [Shewanella baltica OS195]
gi|189029312|sp|A9L185|QUEC_SHEB9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|160860796|gb|ABX49330.1| exsB protein [Shewanella baltica OS195]
gi|315267468|gb|ADT94321.1| exsB protein [Shewanella baltica OS678]
Length = 240
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 146/230 (63%), Gaps = 21/230 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 11 ASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL------- 63
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY
Sbjct: 64 --KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAY 121
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+LG I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 122 QLGADAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALA 181
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
DLV + TCY G G GC CPAC+LR++G ++
Sbjct: 182 DKYQQLDLVR---HHTLTCYNGI------IGDGCGDCPACHLRKRGLDDY 222
>gi|149909159|ref|ZP_01897817.1| queuosine biosynthesis protein QueC [Moritella sp. PE36]
gi|149807910|gb|EDM67855.1| queuosine biosynthesis protein QueC [Moritella sp. PE36]
Length = 242
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 144/232 (62%), Gaps = 21/232 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A A+L+FSGGQDS+TCL AL R+D V+ ++FDYGQR+ E+E V KK
Sbjct: 4 QTANKAVLVFSGGQDSTTCLVDALQRYDSVDCITFDYGQRHSQEIE----VAKKTAAYF- 58
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ I+ + +LG+++ SSLT++ V+ ++ +N LPN+FVPGRNI+F+ A+
Sbjct: 59 ----GVKNHKIINVDLLGELAISSLTRDDIAVSHELMENGLPNSFVPGRNILFMTLASIY 114
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AY++G ++ GVCETD+SGYPDCR + I++I A NLGM TPLMWL K ETW
Sbjct: 115 AYQIGANTVITGVCETDFSGYPDCRDEFIKSINQACNLGMAKDFKFETPLMWLNKAETWA 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LA D+ D ++ + +S TCY G G GC CPAC LR G ++
Sbjct: 175 LA-DL--HDELDFVTHQSLTCYNGI------VGKGCGDCPACLLRNNGLNDY 217
>gi|319891711|ref|YP_004148586.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161407|gb|ADV04950.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus pseudintermedius
HKU10-03]
Length = 222
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 140/224 (62%), Gaps = 19/224 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V K+I E D
Sbjct: 10 ALVVFSGGQDSTTCLFYAKKHFKEVELVTFEYGQRHVKEIE----VAKEIAE------DQ 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ H+L +A+L ++ ++LT + N++PNTFVP RN++FL FA LAY++G +
Sbjct: 60 GLKHHVLDMALLSQLTPNALTSHDMTIESHNDVPNTFVPARNLLFLSFAGALAYQIGAKH 119
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW L+ D+G
Sbjct: 120 LITGVCETDFSGYPDCRDSFIKSMNVTLNLAMDRDFVIHTPLMWLNKKETWALSDDLGVL 179
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V + + TCY G GC CPAC LRQ+G ++
Sbjct: 180 DYVR---DRTLTCYNGI------IAEGCGECPACQLRQRGLEQY 214
>gi|258423361|ref|ZP_05686252.1| exsB protein [Staphylococcus aureus A9635]
gi|257846422|gb|EEV70445.1| exsB protein [Staphylococcus aureus A9635]
Length = 222
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 151/228 (66%), Gaps = 22/228 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A +F VE ++F+YGQR+ E+E V K+I + D
Sbjct: 10 AIVVFSGGQDSTTCLFYAKKQFKEVELVTFNYGQRHDTEIE----VAKQIAQ------DQ 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ H+L +++L ++ ++LT++ M+I +N +PNTFVP RN++FL FA LAY++G
Sbjct: 60 GMKHHVLDMSLLSQLTPNALTQH-DMEITNNEDGIPNTFVPARNLLFLSFAGALAYQIGA 118
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K ETWKL+ ++
Sbjct: 119 KHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAETWKLSDEL- 177
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 178 --EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217
>gi|294141102|ref|YP_003557080.1| exsB protein [Shewanella violacea DSS12]
gi|293327571|dbj|BAJ02302.1| exsB protein [Shewanella violacea DSS12]
Length = 228
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+++D V ++FDYGQR+ E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLIQALEQYDEVHGITFDYGQRHSQEIEVAKDLGKRL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L +L + +L +++ S+LT++ V+ + DN LPNTFVPGRNI+FL A AY+LG
Sbjct: 55 LASHKVLDVTMLNELAISALTRDDIPVSNTLMDNGLPNTFVPGRNILFLTLAGIFAYQLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETDYSGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 AEAVITGVCETDYSGYPDCRNDFVKAMASALVQGMDIELELVTPLMWLNKAETWALADKY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ + L+ +E+ TCY G GC +CPAC LRQ G ++
Sbjct: 175 ---NCLALVRDETLTCY------NNILGSGCGTCPACLLRQTGLDDY 212
>gi|34498962|ref|NP_903177.1| hypothetical protein CV_3507 [Chromobacterium violaceum ATCC 12472]
gi|81654693|sp|Q7NSB9|QUEC_CHRVO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|34104811|gb|AAQ61168.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 234
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 140/229 (61%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++ SGGQDS+TCL WAL RF +VE ++FDYGQR++VEL+C +KI L +
Sbjct: 9 ALVVLSGGQDSTTCLYWALRRFGAGKVEAVTFDYGQRHRVELDCA----RKIAALAGVRQ 64
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATLAY 124
+LP+ I ++LT + D+ LPNTFVPGRN++FL FAA AY
Sbjct: 65 T------VLPIDTFAAIGGNALTDASIAPEEGVRDDDALPNTFVPGRNLVFLTFAAAFAY 118
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G ++V GV +TDYSGYPDCR +T++A+E A+ LGM+S V +HTPLM+L K ET LA
Sbjct: 119 TRGARHLVTGVAQTDYSGYPDCRENTLKALEVALRLGMDSRVELHTPLMYLSKAETVTLA 178
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
Q +G + L SHTCY G+ C C +C LR KG+ E
Sbjct: 179 QQVGALE----ALAWSHTCYNGEVPP-------CGHCASCELRAKGFAE 216
>gi|261419197|ref|YP_003252879.1| exsB protein [Geobacillus sp. Y412MC61]
gi|261375654|gb|ACX78397.1| exsB protein [Geobacillus sp. Y412MC61]
Length = 224
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 144/226 (63%), Gaps = 22/226 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA ++F VE ++FDYGQR++ E +++ D
Sbjct: 9 AVVVFSGGQDSTTCLFWAKEQFGEVEAVTFDYGQRHRRE-----------IDVAQAIADE 57
Query: 71 LGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L L++LG ++ ++LT+ ++A++ ++ LP TFV GRN++FL FAA A + G
Sbjct: 58 LGVRHTVLDLSLLGQLAPNALTRRDIAIEQKEGELPTTFVDGRNLLFLSFAAVFAKQRGA 117
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA ++G
Sbjct: 118 RHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETWKLADELG 177
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ I ++ TCY G GC CPAC LR++G E+
Sbjct: 178 A---LEFIRTKTLTCYNGI------IADGCGECPACVLRKRGLDEY 214
>gi|189029590|sp|A1RJY8|QUEC_SHESW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029599|sp|A4Y6J4|QUEC_SHEPC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 240
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 145/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 14 AVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL---------K 64
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG
Sbjct: 65 ITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLG 124
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 125 AEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALADKY 184
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
DLV + TCY G G GC CPAC+LR++G ++
Sbjct: 185 QQLDLVR---HHTLTCYNGV------IGDGCGDCPACHLRKRGLDDY 222
>gi|319766013|ref|YP_004131514.1| exsB protein [Geobacillus sp. Y412MC52]
gi|317110879|gb|ADU93371.1| exsB protein [Geobacillus sp. Y412MC52]
Length = 223
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 144/226 (63%), Gaps = 22/226 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA ++F VE ++FDYGQR++ E +++ D
Sbjct: 8 AVVVFSGGQDSTTCLFWAKEQFGEVEAVTFDYGQRHRRE-----------IDVAQAIADE 56
Query: 71 LGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L L++LG ++ ++LT+ ++A++ ++ LP TFV GRN++FL FAA A + G
Sbjct: 57 LGVRHTVLDLSLLGQLAPNALTRRDIAIEQKEGELPTTFVDGRNLLFLSFAAVFAKQRGA 116
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA ++G
Sbjct: 117 RHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETWKLADELG 176
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ I ++ TCY G GC CPAC LR++G E+
Sbjct: 177 A---LEFIRTKTLTCYNGI------IADGCGECPACVLRKRGLDEY 213
>gi|169828574|ref|YP_001698732.1| queuosine biosynthesis protein [Lysinibacillus sphaericus C3-41]
gi|254764358|sp|B1HPF6|QUEC_LYSSC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|168993062|gb|ACA40602.1| Queuosine biosynthesis protein [Lysinibacillus sphaericus C3-41]
Length = 219
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 147/232 (63%), Gaps = 25/232 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +RF +E ++F+YGQR+++E+EC ++I E
Sbjct: 2 KQEKAIVVFSGGQDSTTCLFWAKERFAEIEAVTFNYGQRHRLEIECA----EQIAE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATL 122
LG + HIL + +L ++ ++LT+ +K++D LP+TFVPGRN++FL FA L
Sbjct: 54 ---ELGIKHHILDMTLLNQLAPNALTRQ-DIKVEDGQNGELPSTFVPGRNLLFLSFAGVL 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++G +IV GVCETD+SGYPDCR I+++ +NL M++ + TPLMWL K +TW+
Sbjct: 110 ASQIGAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSMDNSFVIDTPLMWLNKAQTWE 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LA G + V E + TCY G GC CPAC LR+KG E+
Sbjct: 170 LADQFGALEFVR---ERTLTCYNGV------IADGCGECPACKLRKKGLDEY 212
>gi|212635181|ref|YP_002311706.1| ExsB protein [Shewanella piezotolerans WP3]
gi|254764384|sp|B8CM62|QUEC_SHEPW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|212556665|gb|ACJ29119.1| ExsB [Shewanella piezotolerans WP3]
Length = 228
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 146/226 (64%), Gaps = 20/226 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K EL K S
Sbjct: 4 AIVVFSGGQDSTTCLIQALTQYDEVHCVTFDYGQRHRQEIE----IAK---ELSSKLGAS 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L + IL D++ S+LT+++ ++ N +PNTFVPGRNI+FL A AY++
Sbjct: 57 --SHQVLDVGILNDLTVSALTRDIPIEENKDGNAIPNTFVPGRNILFLTLAGIYAYQINA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ GVCETD+SGYPDCR++ I++++TA+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 115 DVIITGVCETDFSGYPDCRNEFIKSMQTALMQGMDKQLTISTPLMWLDKAETWALADKYN 174
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+LV ++ TCY G + G GC +CPAC LRQ+G E+
Sbjct: 175 SLELVR---HQTLTCYNGLK------GDGCGTCPACILRQRGLDEY 211
>gi|149179803|ref|ZP_01858308.1| possible aluminum resistance protein [Bacillus sp. SG-1]
gi|148851995|gb|EDL66140.1| possible aluminum resistance protein [Bacillus sp. SG-1]
Length = 220
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 141/228 (61%), Gaps = 19/228 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K AL++FSGGQDS+TCL WA F VE ++F+YGQR+ EL+C R+ EL +
Sbjct: 2 KNEKALVVFSGGQDSTTCLIWAKKEFKEVEAVTFNYGQRHSFELDC---AREIAEELNVR 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
H+L +++L +S S+LT++ + ++ LP+TFVPGRN++F FA LA +
Sbjct: 59 -------HHVLDMSLLNQLSPSALTRDEEITEKEGELPSTFVPGRNLLFFSFAGVLAKNI 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +IV G+CETD+SGYPDCR ++ +NL ++ +HTPLMW+ K TWK A D
Sbjct: 112 GAKHIVTGICETDFSGYPDCRDIFAKSFNVTLNLALDEGYVLHTPLMWMDKEATWKWADD 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G ++ I E++ TCY G R G GC +CP+C LR KG ++
Sbjct: 172 MG---VLQYIREKTLTCYNGIR------GDGCGTCPSCKLRSKGLSDY 210
>gi|120598963|ref|YP_963537.1| queuosine biosynthesis protein QueC [Shewanella sp. W3-18-1]
gi|146292952|ref|YP_001183376.1| queuosine biosynthesis protein QueC [Shewanella putrefaciens CN-32]
gi|120559056|gb|ABM24983.1| exsB protein [Shewanella sp. W3-18-1]
gi|145564642|gb|ABP75577.1| exsB protein [Shewanella putrefaciens CN-32]
gi|319426519|gb|ADV54593.1| exsB protein [Shewanella putrefaciens 200]
Length = 245
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 145/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 19 AVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL---------K 69
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG
Sbjct: 70 ITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLG 129
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 130 AEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALADKY 189
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
DLV + TCY G G GC CPAC+LR++G ++
Sbjct: 190 QQLDLVR---HHTLTCYNGV------IGDGCGDCPACHLRKRGLDDY 227
>gi|114563048|ref|YP_750561.1| exsB protein [Shewanella frigidimarina NCIMB 400]
gi|122299841|sp|Q082U2|QUEC_SHEFN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114334341|gb|ABI71723.1| exsB protein [Shewanella frigidimarina NCIMB 400]
Length = 235
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 153/243 (62%), Gaps = 22/243 (9%)
Query: 1 MNDIIKKAPS-ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M+D + P+ AL++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E V K
Sbjct: 1 MSDAKQNTPTKALVVFSGGQDSTTCLIQALSQYDEVHGITFDYGQRHRQEIE----VAKS 56
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFL 116
+ + L ++ +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL
Sbjct: 57 LATEL-----KLASHKVMDTTLLNELAISALTRDAIPVSHELMNNGLPNTFVPGRNILFL 111
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
A AY+LG I+ GVCETD+SGYPDCR++ +++++ ++ LGM+ + + TPLMWL
Sbjct: 112 TLAGIYAYQLGCDAIITGVCETDFSGYPDCRNEFVQSMQNSLALGMDKPLKIITPLMWLN 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K ETW LA Q L L+ ++ TCY G G GC CPAC LRQ+G ++ +
Sbjct: 172 KAETWALADKY--QQLA-LVQHQTLTCYNGI------VGKGCGDCPACVLRQRGLDDYLQ 222
Query: 237 KYQ 239
Q
Sbjct: 223 NSQ 225
>gi|228475297|ref|ZP_04060021.1| ExsB protein [Staphylococcus hominis SK119]
gi|314936989|ref|ZP_07844336.1| ExsB protein [Staphylococcus hominis subsp. hominis C80]
gi|228270673|gb|EEK12087.1| ExsB protein [Staphylococcus hominis SK119]
gi|313655608|gb|EFS19353.1| ExsB protein [Staphylococcus hominis subsp. hominis C80]
Length = 225
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 152/241 (63%), Gaps = 20/241 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + + + A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V KI
Sbjct: 1 MPNSVLNSEKAIVVFSGGQDSTTCLFYAKRHFKEVELVTFNYGQRHNTEIE----VASKI 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
KD + HIL +++L ++ ++LTK ++ ++ ++ +PNTFVP RN++FL FA
Sbjct: 57 A------KDQGLKHHILDMSLLSQLTPNALTKHDMTIETGEDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQVNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDRDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TW+L+ ++G ++N + + TCY G G GC CPAC LRQ+G ++ E+
Sbjct: 171 TWELSDELG---VLNYVRHNTLTCYNGI------IGDGCGKCPACKLRQRGLHQYLEQKG 221
Query: 240 D 240
D
Sbjct: 222 D 222
>gi|262274644|ref|ZP_06052455.1| queuosine Biosynthesis QueC ATPase [Grimontia hollisae CIP 101886]
gi|262221207|gb|EEY72521.1| queuosine Biosynthesis QueC ATPase [Grimontia hollisae CIP 101886]
Length = 232
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 142/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDY QR+K E+E V K +
Sbjct: 4 AVVVFSGGQDSTTCLIQALSEFDEVHCITFDYNQRHKQEIEVACDVAKTL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+LG
Sbjct: 55 VTSHKVMDVGLLNELAISSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 115 AQTVITGVCETDFSGYPDCRNDFVQSMNKSLVLGMDRELEIRTPLMWLNKAETWALADKY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G + V + + TCY G G GC CPAC LRQKG ++
Sbjct: 175 GKLEYVR---DNTLTCYNGV------IGRGCGDCPACDLRQKGLDDY 212
>gi|282926575|ref|ZP_06334205.1| exsB protein [Staphylococcus aureus A10102]
gi|282591468|gb|EFB96540.1| exsB protein [Staphylococcus aureus A10102]
Length = 222
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 149/227 (65%), Gaps = 20/227 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V K+I + D
Sbjct: 10 AIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIE----VAKQIAQ------DQ 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ H+L +++L ++ ++LT+ ++ + ++ +PNTFVP RN++FL FA LAY++G
Sbjct: 60 GMKHHVLDMSLLSQLTPNALTQHDIEITNNEDGIPNTFVPARNLLFLSFAGALAYQIGAK 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K ETWKL+ ++
Sbjct: 120 HIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAETWKLSDEL-- 177
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 178 -EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217
>gi|15923702|ref|NP_371236.1| aluminum resistance protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926389|ref|NP_373922.1| hypothetical protein SA0667 [Staphylococcus aureus subsp. aureus
N315]
gi|21282403|ref|NP_645491.1| hypothetical protein MW0674 [Staphylococcus aureus subsp. aureus
MW2]
gi|49482968|ref|YP_040192.1| hypothetical protein SAR0765 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485584|ref|YP_042805.1| hypothetical protein SAS0677 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651551|ref|YP_185649.1| exsB protein [Staphylococcus aureus subsp. aureus COL]
gi|87160495|ref|YP_493400.1| exsB protein [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194486|ref|YP_499280.1| hypothetical protein SAOUHSC_00721 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267172|ref|YP_001246115.1| exsB protein [Staphylococcus aureus subsp. aureus JH9]
gi|150393220|ref|YP_001315895.1| exsB protein [Staphylococcus aureus subsp. aureus JH1]
gi|151220893|ref|YP_001331715.1| hypothetical protein NWMN_0681 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979040|ref|YP_001441299.1| hypothetical protein SAHV_0709 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161508976|ref|YP_001574635.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221140928|ref|ZP_03565421.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|253315351|ref|ZP_04838564.1| exsB protein [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253731335|ref|ZP_04865500.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253732844|ref|ZP_04867009.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus TCH130]
gi|255005504|ref|ZP_05144105.2| exsB protein [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424831|ref|ZP_05601258.1| exsB protein [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427499|ref|ZP_05603898.1| exsB protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430130|ref|ZP_05606514.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus 68-397]
gi|257432832|ref|ZP_05609192.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus E1410]
gi|257435736|ref|ZP_05611784.1| exsB protein [Staphylococcus aureus subsp. aureus M876]
gi|257794967|ref|ZP_05643946.1| exsB protein [Staphylococcus aureus A9781]
gi|258418284|ref|ZP_05682549.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9763]
gi|258421581|ref|ZP_05684506.1| exsB protein [Staphylococcus aureus A9719]
gi|258430774|ref|ZP_05688486.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9299]
gi|258441733|ref|ZP_05691005.1| queuosine biosynthesis protein queC [Staphylococcus aureus A8115]
gi|258445825|ref|ZP_05694002.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6300]
gi|258449636|ref|ZP_05697738.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6224]
gi|258452920|ref|ZP_05700914.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5948]
gi|258454037|ref|ZP_05702009.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5937]
gi|262048447|ref|ZP_06021332.1| hypothetical protein SAD30_2174 [Staphylococcus aureus D30]
gi|262052794|ref|ZP_06024982.1| hypothetical protein SA930_0351 [Staphylococcus aureus 930918-3]
gi|269202332|ref|YP_003281601.1| exsB protein [Staphylococcus aureus subsp. aureus ED98]
gi|282894477|ref|ZP_06302706.1| exsB protein [Staphylococcus aureus A8117]
gi|282903339|ref|ZP_06311230.1| ExsB protein [Staphylococcus aureus subsp. aureus C160]
gi|282905119|ref|ZP_06312977.1| exsB protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908096|ref|ZP_06315927.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910356|ref|ZP_06318160.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282913549|ref|ZP_06321338.1| ExsB protein [Staphylococcus aureus subsp. aureus M899]
gi|282916050|ref|ZP_06323813.1| exsB protein [Staphylococcus aureus subsp. aureus D139]
gi|282918502|ref|ZP_06326239.1| exsB protein [Staphylococcus aureus subsp. aureus C427]
gi|282922004|ref|ZP_06329701.1| exsB protein [Staphylococcus aureus A9765]
gi|282923467|ref|ZP_06331147.1| exsB protein [Staphylococcus aureus subsp. aureus C101]
gi|283769874|ref|ZP_06342766.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus H19]
gi|283957541|ref|ZP_06374994.1| ExsB protein [Staphylococcus aureus subsp. aureus A017934/97]
gi|284023734|ref|ZP_06378132.1| exsB protein [Staphylococcus aureus subsp. aureus 132]
gi|293500596|ref|ZP_06666447.1| exsB protein [Staphylococcus aureus subsp. aureus 58-424]
gi|293509542|ref|ZP_06668253.1| exsB protein [Staphylococcus aureus subsp. aureus M809]
gi|293524128|ref|ZP_06670815.1| ExsB protein [Staphylococcus aureus subsp. aureus M1015]
gi|294849381|ref|ZP_06790124.1| exsB protein [Staphylococcus aureus A9754]
gi|295406430|ref|ZP_06816236.1| exsB protein [Staphylococcus aureus A8819]
gi|295427288|ref|ZP_06819923.1| exsB protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296274776|ref|ZP_06857283.1| exsB protein [Staphylococcus aureus subsp. aureus MR1]
gi|297208564|ref|ZP_06924993.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245157|ref|ZP_06929031.1| exsB protein [Staphylococcus aureus A8796]
gi|297590361|ref|ZP_06949000.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
MN8]
gi|300912656|ref|ZP_07130099.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
TCH70]
gi|304381673|ref|ZP_07364322.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|81649771|sp|Q6GBB8|QUEC_STAAS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81651556|sp|Q6GIT0|QUEC_STAAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81695012|sp|Q5HHV8|QUEC_STAAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81704614|sp|Q7A1I5|QUEC_STAAW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81706049|sp|Q7A6U7|QUEC_STAAN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81781962|sp|Q99VR1|QUEC_STAAM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816263|sp|Q2FIS8|QUEC_STAA3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816264|sp|Q2G1X6|QUEC_STAA8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029535|sp|A7WZJ4|QUEC_STAA1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029536|sp|A6TZJ0|QUEC_STAA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029537|sp|A5IQR6|QUEC_STAA9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029538|sp|A6QF21|QUEC_STAAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029539|sp|A8YZY3|QUEC_STAAT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|13700603|dbj|BAB41900.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246481|dbj|BAB56874.1| similar to aluminum resistance protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|21203840|dbj|BAB94539.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49241097|emb|CAG39775.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244027|emb|CAG42453.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285737|gb|AAW37831.1| exsB protein [Staphylococcus aureus subsp. aureus COL]
gi|87126469|gb|ABD20983.1| exsB protein [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202044|gb|ABD29854.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740241|gb|ABQ48539.1| exsB protein [Staphylococcus aureus subsp. aureus JH9]
gi|149945672|gb|ABR51608.1| exsB protein [Staphylococcus aureus subsp. aureus JH1]
gi|150373693|dbj|BAF66953.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721175|dbj|BAF77592.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367785|gb|ABX28756.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253725076|gb|EES93805.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253729209|gb|EES97938.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus TCH130]
gi|257272401|gb|EEV04524.1| exsB protein [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275692|gb|EEV07165.1| exsB protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279327|gb|EEV09928.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus 68-397]
gi|257282247|gb|EEV12382.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus E1410]
gi|257284927|gb|EEV15046.1| exsB protein [Staphylococcus aureus subsp. aureus M876]
gi|257788939|gb|EEV27279.1| exsB protein [Staphylococcus aureus A9781]
gi|257839077|gb|EEV63556.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9763]
gi|257842507|gb|EEV66931.1| exsB protein [Staphylococcus aureus A9719]
gi|257849446|gb|EEV73416.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9299]
gi|257852202|gb|EEV76129.1| queuosine biosynthesis protein queC [Staphylococcus aureus A8115]
gi|257855401|gb|EEV78339.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6300]
gi|257857144|gb|EEV80043.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6224]
gi|257859431|gb|EEV82285.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5948]
gi|257863902|gb|EEV86658.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5937]
gi|259159335|gb|EEW44391.1| hypothetical protein SA930_0351 [Staphylococcus aureus 930918-3]
gi|259163535|gb|EEW48092.1| hypothetical protein SAD30_2174 [Staphylococcus aureus D30]
gi|262074622|gb|ACY10595.1| exsB protein [Staphylococcus aureus subsp. aureus ED98]
gi|269940289|emb|CBI48666.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314335|gb|EFB44725.1| exsB protein [Staphylococcus aureus subsp. aureus C101]
gi|282317636|gb|EFB48008.1| exsB protein [Staphylococcus aureus subsp. aureus C427]
gi|282319998|gb|EFB50345.1| exsB protein [Staphylococcus aureus subsp. aureus D139]
gi|282322581|gb|EFB52903.1| ExsB protein [Staphylococcus aureus subsp. aureus M899]
gi|282325748|gb|EFB56056.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282327761|gb|EFB58043.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331944|gb|EFB61455.1| exsB protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282593662|gb|EFB98654.1| exsB protein [Staphylococcus aureus A9765]
gi|282596294|gb|EFC01255.1| ExsB protein [Staphylococcus aureus subsp. aureus C160]
gi|282763190|gb|EFC03321.1| exsB protein [Staphylococcus aureus A8117]
gi|283460021|gb|EFC07111.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus H19]
gi|283470006|emb|CAQ49217.1| ExsB protein [Staphylococcus aureus subsp. aureus ST398]
gi|283790992|gb|EFC29807.1| ExsB protein [Staphylococcus aureus subsp. aureus A017934/97]
gi|285816413|gb|ADC36900.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus aureus 04-02981]
gi|290921091|gb|EFD98152.1| ExsB protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095601|gb|EFE25862.1| exsB protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291467639|gb|EFF10154.1| exsB protein [Staphylococcus aureus subsp. aureus M809]
gi|294823913|gb|EFG40339.1| exsB protein [Staphylococcus aureus A9754]
gi|294968575|gb|EFG44598.1| exsB protein [Staphylococcus aureus A8819]
gi|295128676|gb|EFG58307.1| exsB protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886819|gb|EFH25723.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177828|gb|EFH37077.1| exsB protein [Staphylococcus aureus A8796]
gi|297576660|gb|EFH95375.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
MN8]
gi|298694041|gb|ADI97263.1| aluminum resistance protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886902|gb|EFK82104.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
TCH70]
gi|302750610|gb|ADL64787.1| queuosine biosynthesis protein QueC [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339776|gb|EFM05721.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312438866|gb|ADQ77937.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
TCH60]
gi|312829205|emb|CBX34047.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129387|gb|EFT85380.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus CGS03]
gi|315194328|gb|EFU24720.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus CGS00]
gi|315197688|gb|EFU28023.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus CGS01]
gi|320139956|gb|EFW31817.1| ExsB protein [Staphylococcus aureus subsp. aureus MRSA131]
gi|320141954|gb|EFW33782.1| ExsB protein [Staphylococcus aureus subsp. aureus MRSA177]
gi|323438939|gb|EGA96674.1| aluminum resistance protein [Staphylococcus aureus O11]
gi|323441588|gb|EGA99237.1| aluminum resistance protein [Staphylococcus aureus O46]
gi|329313434|gb|AEB87847.1| 7-cyano-7-deazaguanine synthase [Staphylococcus aureus subsp.
aureus T0131]
gi|329724593|gb|EGG61100.1| queuosine biosynthesis protein QueC [Staphylococcus aureus subsp.
aureus 21172]
gi|329728517|gb|EGG64950.1| protein ExsB [Staphylococcus aureus subsp. aureus 21189]
gi|329729639|gb|EGG66040.1| protein ExsB [Staphylococcus aureus subsp. aureus 21193]
Length = 222
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 150/228 (65%), Gaps = 22/228 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V K+I + D
Sbjct: 10 AIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIE----VAKQIAQ------DQ 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ H+L +++L ++ ++LT++ M+I +N +PNTFVP RN++FL FA LAY++G
Sbjct: 60 GMKHHVLDMSLLSQLTPNALTQH-DMEITNNEDGIPNTFVPARNLLFLSFAGALAYQIGA 118
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K ETWKL+ ++
Sbjct: 119 KHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAETWKLSDEL- 177
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 178 --EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217
>gi|239636675|ref|ZP_04677677.1| ExsB protein [Staphylococcus warneri L37603]
gi|239598030|gb|EEQ80525.1| ExsB protein [Staphylococcus warneri L37603]
Length = 223
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 147/229 (64%), Gaps = 22/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F V ++F+YGQR+ E+E V KKI + +
Sbjct: 11 AIVVFSGGQDSTTCLFYAKKHFKDVTLVTFNYGQRHDTEIE----VAKKIAQ------EQ 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E HIL +++L ++ ++LT++ +KI+D + +PNTFVP RN++FL FA LAY++
Sbjct: 61 NVEHHILDMSLLSQLTPNALTQH-DLKIEDTEDGIPNTFVPARNLLFLSFAGALAYQIKA 119
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TW+LA D+G
Sbjct: 120 KHIITGVCETDFSGYPDCRDSFIKSMNVTLNLSMDRDFVIHTPLMWLDKAQTWELADDLG 179
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++N I E + TCY G G GC CPAC LR +G ++ K
Sbjct: 180 ---VLNYIRENTLTCYNGI------IGDGCGECPACQLRSRGLEKYLAK 219
>gi|82750414|ref|YP_416155.1| aluminum resistance protein [Staphylococcus aureus RF122]
gi|110816265|sp|Q2YSL9|QUEC_STAAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|82655945|emb|CAI80349.1| probable aluminum resistance protein [Staphylococcus aureus RF122]
Length = 222
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 150/228 (65%), Gaps = 22/228 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V K+I + D
Sbjct: 10 AIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIE----VAKQIAQ------DQ 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ H+L +++L ++ ++LT++ M+I +N +PNTFVP RN++FL FA LAY++G
Sbjct: 60 GMKHHVLDMSLLSQLTPNALTQH-DMEITNNEDGIPNTFVPARNLLFLSFAGALAYQIGA 118
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K ETWKL+ ++
Sbjct: 119 KHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDCVIHTPLMWLNKAETWKLSDEL- 177
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 178 --EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217
>gi|224475853|ref|YP_002633459.1| putative ExsB family protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420460|emb|CAL27274.1| putative ExsB family protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 223
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 148/229 (64%), Gaps = 22/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL +A ++F+ VE ++F YGQR+ E+E V KKI D
Sbjct: 11 ALVVFSGGQDSTTCLFYAKEKFEEVELVTFQYGQRHDTEIE----VAKKIA-------DE 59
Query: 71 LG-EDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
G + HIL +++L ++ ++LT+ N+ ++ D+ +PNTFVP RN++FL FA LAY++
Sbjct: 60 QGLKHHILDMSLLSQLTPNALTQHNLEIEQTDDGVPNTFVPARNLLFLSFAGALAYQIKA 119
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I+ GVCETD+SGYPDCR D ++++ +NL M+ + +HTPLMWL K ETW L+ +G
Sbjct: 120 RHIITGVCETDFSGYPDCRDDFVKSMNVTLNLSMDKNFVIHTPLMWLDKKETWALSDQLG 179
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+++ + ++ TCY G GC CPAC LR +G + E+
Sbjct: 180 ---VLDYVRNQTLTCYNGI------IADGCGECPACKLRARGLNAYLEE 219
>gi|121533884|ref|ZP_01665710.1| exsB protein [Thermosinus carboxydivorans Nor1]
gi|121307395|gb|EAX48311.1| exsB protein [Thermosinus carboxydivorans Nor1]
Length = 223
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 141/231 (61%), Gaps = 23/231 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL++FSGGQDS+TCL WA+ F VE ++FDYGQR++ E+EC K
Sbjct: 8 NALVVFSGGQDSTTCLFWAMKHFQEVEAVTFDYGQRHRAEIEC-----------AQKIAA 56
Query: 70 SLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAYRL 126
G H IL L++L ++ S+LT+ ++ +K +N LP TFVPGRN++FL FAA LA +
Sbjct: 57 EQGIAHTILDLSLLNQLAPSALTRADIEVKAGENGGLPTTFVPGRNLLFLSFAAVLARQK 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +IV GVCETD+SGYPDCR I+++ I L M+ +HTPLMWL K ETW+LA
Sbjct: 117 NIRHIVTGVCETDFSGYPDCRDAFIKSLNVTIQLAMDYQFVIHTPLMWLNKAETWELADQ 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G +++ I + TCY G G GC CPAC LR G + K
Sbjct: 177 LG---VLDYIRSNTLTCYHGV------IGDGCGQCPACRLRVAGLNAYLAK 218
>gi|302332422|gb|ADL22615.1| queuosine biosynthesis protein QueC [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 222
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 150/228 (65%), Gaps = 22/228 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + K+I + D
Sbjct: 10 AIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIE----IAKQIAQ------DQ 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ H+L +++L ++ ++LT++ M+I +N +PNTFVP RN++FL FA LAY++G
Sbjct: 60 GMKHHVLDMSLLSQLTPNALTQH-DMEITNNEDGIPNTFVPARNLLFLSFAGALAYQIGA 118
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K ETWKL+ ++
Sbjct: 119 KHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAETWKLSDEL- 177
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 178 --EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217
>gi|310639675|ref|YP_003944433.1| atpase, confers aluminum resistance [Paenibacillus polymyxa SC2]
gi|309244625|gb|ADO54192.1| Putative ATPase, confers aluminum resistance [Paenibacillus
polymyxa SC2]
Length = 219
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 148/230 (64%), Gaps = 23/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL WAL +D V+T+SF YGQR+K+ELEC + K EL K
Sbjct: 5 ALVVFSGGQDSTTCLLWALKEYDEVQTVSFQYGQRHKLELECASEIAK---ELNVK---- 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H+L L +L ++ ++LT+ ++I+ + LPNTFV GRN++FL FAA LA +LG
Sbjct: 58 ---HHVLDLNLLNQLAPNALTRE-DIEIEAGSEGALPNTFVDGRNMLFLSFAAILAKQLG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+I+ GVC+TD+SGYPDCR ++++ +NL M+ + +HTPLMWL K +TW+LA +
Sbjct: 114 YYHIITGVCQTDFSGYPDCRDVFVKSLNVTLNLSMDYNFVIHTPLMWLNKKQTWELADQL 173
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G D V ++ TCY G G GC CPAC LR+ G ++ ++
Sbjct: 174 GHLDFVR---TKTLTCYNGI------IGDGCGECPACLLRRAGLEQYLQE 214
>gi|91224505|ref|ZP_01259767.1| exsB protein [Vibrio alginolyticus 12G01]
gi|91190847|gb|EAS77114.1| exsB protein [Vibrio alginolyticus 12G01]
Length = 218
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL AL+ +D V ++FDYGQR+ E++ + + K++ +
Sbjct: 6 ALVVFSGGQDSTTCLIDALNTYDEVHAITFDYGQRHSDEIDIAIELGKQL---------N 56
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ +L + + +++ SSLT++ V+ + D N+PNTFVPGRNI+FL +A AY+LG
Sbjct: 57 IKSHKVLDVKSINELAISSLTRDNIPVSNDLSDANVPNTFVPGRNILFLTYACIHAYQLG 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I+ GVCETD+SGYPDCR + IR++ + NLGM+ + TPLMWL K ETW LA
Sbjct: 117 IQDIITGVCETDFSGYPDCRDNFIRSLNLSCNLGMDKAFNIKTPLMWLTKAETWALADK- 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+++ + + TCY G G GC CPAC LRQ G E+
Sbjct: 176 --HNMLEFVQNNTLTCYNGI------VGKGCGECPACLLRQSGLEEY 214
>gi|196247862|ref|ZP_03146564.1| exsB protein [Geobacillus sp. G11MC16]
gi|196212646|gb|EDY07403.1| exsB protein [Geobacillus sp. G11MC16]
Length = 223
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 143/226 (63%), Gaps = 22/226 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E +E+ D
Sbjct: 8 AVVVFSGGQDSTTCLFWAKKQFAEVEAVTFDYGQRHRRE-----------IEVAASIADE 56
Query: 71 LGEDH-ILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L +++LG ++ ++LT+ +A++ ++ LP TFV GRN++FL FAA LA + G
Sbjct: 57 LGVRHTVLDMSLLGQLAPNALTRGEIAIEQKEGELPTTFVDGRNLLFLSFAAVLAKQRGA 116
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR I+++ +NL M+ ++TPLMWL K ETWKLA ++G
Sbjct: 117 RHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYPFVIYTPLMWLTKAETWKLADELG 176
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ V ++ TCY G GC CPAC LR++G E+
Sbjct: 177 ALEFVR---TKTLTCYNGV------IADGCGECPACVLRKRGLEEY 213
>gi|152974868|ref|YP_001374385.1| exsB protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|189038895|sp|A7GMN2|QUEC_BACCN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|152023620|gb|ABS21390.1| exsB protein [Bacillus cytotoxicus NVH 391-98]
Length = 220
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 146/226 (64%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E+EC + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIECAANIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGIKHTVLDMSLLNQLAPNALTRTDIDITHEEGELPSTFVEGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K +TWKL+
Sbjct: 111 QVGARHIVTGVCETDFSGYPDCRDAFVKSLNVTLNLSMDYPFVIHTPLMWIDKADTWKLS 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G D V E++ TCY G G GC CPAC LR+ G
Sbjct: 171 DELGAFDFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 207
>gi|114047412|ref|YP_737962.1| queuosine biosynthesis protein QueC [Shewanella sp. MR-7]
gi|122944692|sp|Q0HVF0|QUEC_SHESR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|113888854|gb|ABI42905.1| exsB protein [Shewanella sp. MR-7]
Length = 239
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 140/221 (63%), Gaps = 21/221 (9%)
Query: 17 GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
GGQDS+TCL AL +FD V ++FDYGQR++ E+E + K++ + +
Sbjct: 15 GGQDSTTCLIQALTQFDEVHGITFDYGQRHREEIEVAKSLAKRL---------KITSHKV 65
Query: 77 LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG I+
Sbjct: 66 MDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIFAYQLGAEAIIT 125
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
GVCETD+SGYPDCRHD +RA+E+A+ GM+ + + TPLMWL K +TW LA DLV
Sbjct: 126 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLEIITPLMWLNKAQTWALADKYQQLDLV 185
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ TCY G G GC CPAC+LR++G ++
Sbjct: 186 R---HHTLTCYNGI------VGDGCGDCPACHLRKRGLEDY 217
>gi|56419510|ref|YP_146828.1| aluminum resistance protein [Geobacillus kaustophilus HTA426]
gi|56379352|dbj|BAD75260.1| aluminum resistance protein [Geobacillus kaustophilus HTA426]
Length = 224
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 146/232 (62%), Gaps = 23/232 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E++ + D
Sbjct: 9 AVVVFSGGQDSTTCLFWAKKQFGEVEAVTFDYGQRHRREIDVAQAI-----------ADE 57
Query: 71 LGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L L++LG ++ ++LT+ ++A++ + LP TFV GRN++FL FAA A + G
Sbjct: 58 LGVRHTVLDLSLLGQLAPNALTRRDIAIEQKKGELPTTFVDGRNLLFLSFAAVFAKQRGA 117
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA ++G
Sbjct: 118 RHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETWKLADELG 177
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEKYQ 239
+ I ++ TCY G GC CPAC LR++G E+ +EK +
Sbjct: 178 A---LEFIRTKTLTCYNGI------IADGCGECPACALRKRGLDEYLREKAE 220
>gi|330830003|ref|YP_004392955.1| putative (Aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Aeromonas veronii B565]
gi|328805139|gb|AEB50338.1| Putative (Aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Aeromonas veronii B565]
Length = 235
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 145/229 (63%), Gaps = 25/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL R+D V ++FDYGQR++ E ++ + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALARYDEVHAITFDYGQRHREE-----------IDTARRLGSA 52
Query: 71 LG--EDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG ++ + +L +++ S+LT++ V+ ++QDN LPNTFVPGRNI+FL A+ AY+
Sbjct: 53 LGIAAHKVMDVTLLNELAVSALTRDDIPVSCELQDNGLPNTFVPGRNILFLTLASIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++A+ A++LG++ + TPLMWL K ETW LA
Sbjct: 113 VGAEAVITGVCETDFSGYPDCRDEFVKALNQAVSLGLDRGIRFETPLMWLDKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G D V +++ TCY G G GC +CPAC LR++G +
Sbjct: 173 HYGHLDTVR---QQTLTCYNGI------AGDGCGTCPACELRRRGLNNY 212
>gi|110816227|sp|Q5L1C0|QUEC_GEOKA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 221
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 146/232 (62%), Gaps = 23/232 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E +++ D
Sbjct: 6 AVVVFSGGQDSTTCLFWAKKQFGEVEAVTFDYGQRHRRE-----------IDVAQAIADE 54
Query: 71 LGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L L++LG ++ ++LT+ ++A++ + LP TFV GRN++FL FAA A + G
Sbjct: 55 LGVRHTVLDLSLLGQLAPNALTRRDIAIEQKKGELPTTFVDGRNLLFLSFAAVFAKQRGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA ++G
Sbjct: 115 RHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETWKLADELG 174
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEKYQ 239
+ I ++ TCY G GC CPAC LR++G E+ +EK +
Sbjct: 175 A---LEFIRTKTLTCYNGI------IADGCGECPACALRKRGLDEYLREKAE 217
>gi|297530834|ref|YP_003672109.1| exsB protein [Geobacillus sp. C56-T3]
gi|297254086|gb|ADI27532.1| exsB protein [Geobacillus sp. C56-T3]
Length = 223
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 143/226 (63%), Gaps = 22/226 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E++ + D
Sbjct: 8 AVVVFSGGQDSTTCLFWAKKQFGEVEAVTFDYGQRHRREIDVAQAI-----------ADE 56
Query: 71 LGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L L++LG ++ ++LT+ ++A++ ++ LP TFV GRN++FL FAA A + G
Sbjct: 57 LGVRHTVLDLSLLGQLAPNALTRRDIAIEQKEGELPTTFVDGRNLLFLSFAAVFAKQRGA 116
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA ++G
Sbjct: 117 RHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETWKLADELG 176
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ I ++ TCY G GC CPAC LR++G E+
Sbjct: 177 A---LEFIRTKTLTCYNGI------IADGCGECPACVLRKRGLDEY 213
>gi|84387076|ref|ZP_00990099.1| predicted ATPase [Vibrio splendidus 12B01]
gi|84378151|gb|EAP95011.1| predicted ATPase [Vibrio splendidus 12B01]
Length = 231
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHRLEIEVAESLSKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 ANTVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDKPLDIKTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+LV ++ TCY G G GC CPAC LR+ G ++
Sbjct: 175 SALELVR---NKTLTCYNGI------VGDGCGDCPACELRKVGLNDY 212
>gi|229010736|ref|ZP_04167933.1| hypothetical protein bmyco0001_11910 [Bacillus mycoides DSM 2048]
gi|228750410|gb|EEM00239.1| hypothetical protein bmyco0001_11910 [Bacillus mycoides DSM 2048]
Length = 223
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 148/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F+ VE ++F+Y QR+K+E++C + + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIQQFEEVEAVTFNYNQRHKLEIDCAVEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H IL +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTILDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFIIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|163939247|ref|YP_001644131.1| exsB protein [Bacillus weihenstephanensis KBAB4]
gi|254764308|sp|A9VKR8|QUEC_BACWK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|163861444|gb|ABY42503.1| exsB protein [Bacillus weihenstephanensis KBAB4]
Length = 220
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 148/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F+ VE ++F+Y QR+K+E++C + + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIQQFEEVEAVTFNYNQRHKLEIDCAVEIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H IL +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGIKHTILDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 111 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 171 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 207
>gi|289551433|ref|YP_003472337.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus lugdunensis
HKU09-01]
gi|315658942|ref|ZP_07911809.1| transcription regulator ExsB [Staphylococcus lugdunensis M23590]
gi|289180964|gb|ADC88209.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus lugdunensis
HKU09-01]
gi|315496066|gb|EFU84394.1| transcription regulator ExsB [Staphylococcus lugdunensis M23590]
Length = 223
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 146/225 (64%), Gaps = 20/225 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A FD VE ++F+YGQR+ E+E V K I +
Sbjct: 11 AIVVFSGGQDSTTCLFYAKKHFDEVELVTFNYGQRHNTEIE----VAKSIAH-----EQG 61
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L HIL +++L ++ ++LT+ ++ ++ D+ +PNTFVP RN++FL FA LAY+L
Sbjct: 62 LAH-HILDMSLLSQLTPNALTQHDMKIETNDDGMPNTFVPARNLLFLSFAGALAYQLNAK 120
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+ GVCETD+SGYPDCR + I+++ ++L M+ +HTPLMWL K +TW L+ ++G
Sbjct: 121 HIITGVCETDFSGYPDCRDNFIKSMNVTLSLAMDKDFVIHTPLMWLNKAQTWALSDELG- 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+++ I ++ TCY G G GC CPAC+LR +G ++
Sbjct: 180 --VLDYIRHQTLTCYNGI------IGDGCGECPACHLRARGLQQY 216
>gi|310780052|ref|YP_003968384.1| preQ(0) biosynthesis protein QueC [Ilyobacter polytropus DSM 2926]
gi|309749375|gb|ADO84036.1| preQ(0) biosynthesis protein QueC [Ilyobacter polytropus DSM 2926]
Length = 222
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 149/242 (61%), Gaps = 23/242 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M +II K +L+FSGGQDSST L WA +F V LSF+YGQ++ +EL+C + KK
Sbjct: 1 MQNIIDK-DRCVLVFSGGQDSSTLLFWAKKKFKEVIALSFNYGQKHDLELQCAKDICKKY 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLV 117
E HIL + +L ++ ++LT+ V + + LPNTFV GRN+IFL
Sbjct: 60 DV----------EHHILDMGLLSQLAPNALTRTDIKVDKEAPEGGLPNTFVDGRNMIFLT 109
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
FA+ A + I +++ GV ++D+SGYPDCR I++I T ++L M+ + TPLMWL K
Sbjct: 110 FASIFAKQRNINHVITGVSQSDFSGYPDCRDIFIKSISTTLSLAMDYQFVIDTPLMWLDK 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
ETWK+A D+G ++++I E+ TCY G G GC CPAC LR+ G++EFK K
Sbjct: 170 AETWKMADDLG---VLDIIKNETLTCYNGI------IGNGCGECPACKLRKNGYVEFKRK 220
Query: 238 YQ 239
++
Sbjct: 221 FK 222
>gi|182416846|ref|ZP_02948232.1| ExsB protein [Clostridium butyricum 5521]
gi|237669043|ref|ZP_04529027.1| ExsB protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379308|gb|EDT76807.1| ExsB protein [Clostridium butyricum 5521]
gi|237657391|gb|EEP54947.1| ExsB protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 218
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 150/233 (64%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WAL++FD V ++F+Y Q++K+E+EC + K+
Sbjct: 5 AVVVFSGGQDSTTCLFWALEQFDEVIAVTFNYNQKHKLEIECAKSIAKE----------- 53
Query: 71 LG-EDHILPLAILGDISHSSLTKN-VAMKIQDNN-LPNTFVPGRNIIFLVFAATLAYRLG 127
LG E HIL + +L ++ ++LT++ + +K+ +N P+TFV GRN++FL FA LA G
Sbjct: 54 LGVEHHILDMGLLNQLAPNALTRDDIEIKMGENGEPPSTFVEGRNMLFLTFAGVLAKVKG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+IV GVCETD+SGYPDCR ++++ +NL M+ VHTPLMW+ K ETWK+A D
Sbjct: 114 AKHIVTGVCETDFSGYPDCRDVFVKSLNVTMNLAMDYEFVVHTPLMWIDKAETWKMADDF 173
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEK 237
G + V E++ TCY G G GC CPAC LR++G ++E K+K
Sbjct: 174 GKLEYVR---EKTLTCYNGI------IGDGCGKCPACILRKRGLDNYLESKKK 217
>gi|229160392|ref|ZP_04288390.1| hypothetical protein bcere0009_11860 [Bacillus cereus R309803]
gi|228623116|gb|EEK79944.1| hypothetical protein bcere0009_11860 [Bacillus cereus R309803]
Length = 223
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAADIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + Q+ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHQEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|113970396|ref|YP_734189.1| queuosine biosynthesis protein QueC [Shewanella sp. MR-4]
gi|123325002|sp|Q0HII5|QUEC_SHESM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|113885080|gb|ABI39132.1| exsB protein [Shewanella sp. MR-4]
Length = 239
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 140/221 (63%), Gaps = 21/221 (9%)
Query: 17 GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
GGQDS+TCL AL +FD V ++FDYGQR++ E+E + K++ + +
Sbjct: 15 GGQDSTTCLIQALTQFDEVHGITFDYGQRHREEIEVAKSLAKRL---------KITSHKV 65
Query: 77 LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG I+
Sbjct: 66 MDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLGAEAIIT 125
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
GVCETD+SGYPDCRHD +RA+E+A+ GM+ + + TPLMWL K +TW LA DLV
Sbjct: 126 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLEIITPLMWLNKAQTWALADKYQQLDLV 185
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ TCY G G GC CPAC+LR++G ++
Sbjct: 186 R---HHTLTCYNGI------VGDGCGECPACHLRKRGLEDY 217
>gi|117920608|ref|YP_869800.1| queuosine biosynthesis protein QueC [Shewanella sp. ANA-3]
gi|189029564|sp|A0KX75|QUEC_SHESA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|117612940|gb|ABK48394.1| exsB protein [Shewanella sp. ANA-3]
Length = 239
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 141/221 (63%), Gaps = 21/221 (9%)
Query: 17 GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
GGQDS+TCL AL +FD V ++FDYGQR++ E+E + K++ + +
Sbjct: 15 GGQDSTTCLIQALTQFDEVHGITFDYGQRHREEIEVAKSLAKRL---------KITSHKV 65
Query: 77 LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG I+
Sbjct: 66 IDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLGAGAIIT 125
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
GVCETD+SGYPDCRHD +RA+E+A+ GM+ + + TPLMWL K +TW LA DLV
Sbjct: 126 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLEIITPLMWLNKAQTWALADKYQQLDLV 185
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ TCY G G GC +CPAC+LR++G ++
Sbjct: 186 R---HHTLTCYNGI------VGDGCGACPACHLRKRGLEDY 217
>gi|126651677|ref|ZP_01723880.1| possible aluminum resistance protein [Bacillus sp. B14905]
gi|126591626|gb|EAZ85732.1| possible aluminum resistance protein [Bacillus sp. B14905]
Length = 219
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 144/228 (63%), Gaps = 25/228 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +RF +E ++FDYGQR+++E++C K I E
Sbjct: 2 KQEKAIVVFSGGQDSTTCLFWAKERFAEIEAVTFDYGQRHRLEIDCA----KLIAE---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATL 122
LG + HIL +++L ++ ++LT+ +K++D LP+TFVPGRN++FL FA L
Sbjct: 54 ---ELGIKHHILDMSLLNQLAPNALTRQ-DIKVEDGKNGELPSTFVPGRNLLFLSFAGVL 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++G +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K +TW+
Sbjct: 110 ASQVGAKHIITGVCETDFSGYPDCRDVFIKSLNVTLNLSMDDSFVIDTPLMWLNKAQTWE 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
LA G + V E + TCY G GC CPAC LR+KG
Sbjct: 170 LADQFGALEFVR---ERTLTCYNGV------IADGCGECPACKLRKKG 208
>gi|229057066|ref|ZP_04196458.1| hypothetical protein bcere0026_11820 [Bacillus cereus AH603]
gi|229132237|ref|ZP_04261093.1| hypothetical protein bcere0014_11750 [Bacillus cereus BDRD-ST196]
gi|229166274|ref|ZP_04294033.1| hypothetical protein bcere0007_12480 [Bacillus cereus AH621]
gi|228617219|gb|EEK74285.1| hypothetical protein bcere0007_12480 [Bacillus cereus AH621]
gi|228651175|gb|EEL07154.1| hypothetical protein bcere0014_11750 [Bacillus cereus BDRD-ST196]
gi|228720207|gb|EEL71786.1| hypothetical protein bcere0026_11820 [Bacillus cereus AH603]
Length = 223
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F+ VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIQQFEEVEAVTFNYNQRHKLEIDCAAEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H IL +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTILDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|224824583|ref|ZP_03697690.1| exsB protein [Lutiella nitroferrum 2002]
gi|224603076|gb|EEG09252.1| exsB protein [Lutiella nitroferrum 2002]
Length = 230
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 141/232 (60%), Gaps = 31/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++ SGGQDS+TCL WAL RF D VE ++FDYGQR++VEL+ + I L
Sbjct: 7 ALVVLSGGQDSTTCLYWALQRFGADNVEAVTFDYGQRHRVELDSA----RTIAALA---- 58
Query: 69 DSLGEDH-ILPLAILGDISHSSLT------KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G H +LP+ I ++LT ++ A D LPNTFVPGRN+IFL FAA
Sbjct: 59 ---GVPHTVLPIDTFAAIGGNALTDASITPESGARADDDTALPNTFVPGRNLIFLNFAAA 115
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
Y G ++V GV +TDYSGYPDCR +T++A+E A+ LG+++ V +HTPLM+L K +T
Sbjct: 116 FGYTRGARHLVTGVAQTDYSGYPDCRENTLKALELALRLGLDARVELHTPLMYLSKADTV 175
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+LAQ +G + + SHTCY G++ C C AC LR KG+ E
Sbjct: 176 RLAQQVGAMEAMAF----SHTCYNGEQPP-------CGHCAACELRAKGFAE 216
>gi|228957712|ref|ZP_04119456.1| hypothetical protein bthur0005_12280 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801955|gb|EEM48828.1| hypothetical protein bthur0005_12280 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 223
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKLA
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLA 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|222150715|ref|YP_002559868.1| ExsB protein [Macrococcus caseolyticus JCSC5402]
gi|222119837|dbj|BAH17172.1| ExsB protein [Macrococcus caseolyticus JCSC5402]
Length = 222
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 148/227 (65%), Gaps = 20/227 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TC+ +A+ +D VE ++F+YGQR+ +E++ + K+I E +
Sbjct: 9 ALVVFSGGQDSTTCMFYAMHHYDEVELVTFNYGQRHALEID----IAKQIAE------EQ 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ H+L +++L +S ++LT + + I++N++PNTFVP RN++F+ FAA LAY++ +
Sbjct: 59 GLKHHVLDMSLLSQLSPNALTHH-DLTIENNDIPNTFVPARNLLFMSFAAALAYQINAKH 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
I+ GVCETD+SGYPDCR + I+++ INL M+ + +HTPLMWL K ETW LA +G
Sbjct: 118 IITGVCETDFSGYPDCRDNFIKSLNVTINLSMDLNFEIHTPLMWLDKKETWALADTLGQL 177
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D I ++ TCY G GC CP+C LR G ++ ++
Sbjct: 178 D---YIRNKTLTCYNGIP------ADGCGECPSCKLRNNGLNQYLQE 215
>gi|228914011|ref|ZP_04077633.1| hypothetical protein bthur0012_12480 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228845616|gb|EEM90645.1| hypothetical protein bthur0012_12480 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 223
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 148/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVKIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|261405279|ref|YP_003241520.1| exsB protein [Paenibacillus sp. Y412MC10]
gi|261281742|gb|ACX63713.1| exsB protein [Paenibacillus sp. Y412MC10]
Length = 225
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 145/231 (62%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +RF VET++FDYGQR+K+E+EC + K
Sbjct: 3 KNEKAVVVFSGGQDSTTCLFWAKERFAEVETVTFDYGQRHKLEIECAAQIAK-------- 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + +L +++L ++ ++LT++ + + LP TFV GRN++FL FAA LA +
Sbjct: 55 --EQGVKQTVLDMSLLNQLAPNALTRSDIEIAEGDGLPTTFVDGRNLLFLSFAAVLAKGV 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW+LA
Sbjct: 113 GAKHLITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKSETWELADQ 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + + I + + TCY G + G GC CPAC LR+ G ++ ++
Sbjct: 173 M---NALEYIRDHTLTCYNGIK------GDGCGECPACQLRKAGLDKYMQR 214
>gi|229084430|ref|ZP_04216710.1| hypothetical protein bcere0022_10700 [Bacillus cereus Rock3-44]
gi|228698970|gb|EEL51675.1| hypothetical protein bcere0022_10700 [Bacillus cereus Rock3-44]
Length = 220
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 146/226 (64%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAADIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVEGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 111 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G D V E++ TCY G G GC CPAC LR+ G
Sbjct: 171 DELGAFDFVR---EKTLTCYNGI------IGDGCGECPACKLRKAG 207
>gi|65318709|ref|ZP_00391668.1| COG0603: Predicted PP-loop superfamily ATPase [Bacillus anthracis
str. A2012]
gi|228926470|ref|ZP_04089542.1| hypothetical protein bthur0010_11890 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228932722|ref|ZP_04095594.1| hypothetical protein bthur0009_11980 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228945038|ref|ZP_04107399.1| hypothetical protein bthur0007_12040 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229120979|ref|ZP_04250221.1| hypothetical protein bcere0016_12880 [Bacillus cereus 95/8201]
gi|229183633|ref|ZP_04310856.1| hypothetical protein bcere0004_12050 [Bacillus cereus BGSC 6E1]
gi|228599876|gb|EEK57473.1| hypothetical protein bcere0004_12050 [Bacillus cereus BGSC 6E1]
gi|228662639|gb|EEL18237.1| hypothetical protein bcere0016_12880 [Bacillus cereus 95/8201]
gi|228814707|gb|EEM60967.1| hypothetical protein bthur0007_12040 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228826927|gb|EEM72689.1| hypothetical protein bthur0009_11980 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228833294|gb|EEM78859.1| hypothetical protein bthur0010_11890 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 223
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 148/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|329925236|ref|ZP_08280179.1| protein ExsB [Paenibacillus sp. HGF5]
gi|328940069|gb|EGG36402.1| protein ExsB [Paenibacillus sp. HGF5]
Length = 225
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 144/231 (62%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +RF VET++FDYGQR+K+E+EC + K
Sbjct: 3 KNEKAVVVFSGGQDSTTCLFWAKERFAEVETVTFDYGQRHKLEIECAAQIAK-------- 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + +L +++L ++ ++LT++ + + LP TFV GRN++FL FAA LA +
Sbjct: 55 --EQGVKQTVLDMSLLNQLAPNALTRSDIEIAEGDGLPTTFVDGRNLLFLSFAAVLAKGV 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW+LA
Sbjct: 113 GAKHLITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKSETWELADQ 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + V + + TCY G + G GC CPAC LR+ G ++ ++
Sbjct: 173 MNALEYVR---DHTLTCYNGIK------GDGCGECPACKLRKAGLDKYMQR 214
>gi|86145929|ref|ZP_01064257.1| predicted ATPase [Vibrio sp. MED222]
gi|85836384|gb|EAQ54514.1| predicted ATPase [Vibrio sp. MED222]
Length = 231
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E + K +
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHRLEIEVAESLSKDL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 ANTVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDKPLDIKTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+LV ++ TCY G G GC CPAC LR+ G ++
Sbjct: 175 SALELVR---NKTLTCYNGI------IGDGCGDCPACELRKIGLSDY 212
>gi|229149641|ref|ZP_04277872.1| hypothetical protein bcere0011_12000 [Bacillus cereus m1550]
gi|228633851|gb|EEK90449.1| hypothetical protein bcere0011_12000 [Bacillus cereus m1550]
Length = 223
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYKGI------IGDGCGECPACQLRKAG 210
>gi|30261440|ref|NP_843817.1| exsB protein [Bacillus anthracis str. Ames]
gi|47526629|ref|YP_017978.1| ExsB family transcriptional regulator [Bacillus anthracis str.
'Ames Ancestor']
gi|49184274|ref|YP_027526.1| exsB protein [Bacillus anthracis str. Sterne]
gi|165870370|ref|ZP_02215025.1| exsB protein [Bacillus anthracis str. A0488]
gi|167634318|ref|ZP_02392639.1| exsB protein [Bacillus anthracis str. A0442]
gi|167639318|ref|ZP_02397590.1| exsB protein [Bacillus anthracis str. A0193]
gi|170686660|ref|ZP_02877880.1| exsB protein [Bacillus anthracis str. A0465]
gi|170706321|ref|ZP_02896782.1| exsB protein [Bacillus anthracis str. A0389]
gi|177651440|ref|ZP_02934229.1| exsB protein [Bacillus anthracis str. A0174]
gi|190568037|ref|ZP_03020947.1| exsB protein [Bacillus anthracis Tsiankovskii-I]
gi|196035303|ref|ZP_03102708.1| exsB protein [Bacillus cereus W]
gi|218902547|ref|YP_002450381.1| exsB protein [Bacillus cereus AH820]
gi|227815813|ref|YP_002815822.1| exsB protein [Bacillus anthracis str. CDC 684]
gi|229603244|ref|YP_002865853.1| exsB protein [Bacillus anthracis str. A0248]
gi|254682497|ref|ZP_05146358.1| exsB protein [Bacillus anthracis str. CNEVA-9066]
gi|254726160|ref|ZP_05187942.1| exsB protein [Bacillus anthracis str. A1055]
gi|254733913|ref|ZP_05191627.1| exsB protein [Bacillus anthracis str. Western North America
USA6153]
gi|254740397|ref|ZP_05198088.1| exsB protein [Bacillus anthracis str. Kruger B]
gi|254753787|ref|ZP_05205822.1| exsB protein [Bacillus anthracis str. Vollum]
gi|254758884|ref|ZP_05210911.1| exsB protein [Bacillus anthracis str. Australia 94]
gi|81582971|sp|Q81TC7|QUEC_BACAN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764300|sp|C3P4F6|QUEC_BACAA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764301|sp|C3LAL0|QUEC_BACAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764302|sp|B7JFS4|QUEC_BACC0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|30255294|gb|AAP25303.1| protein ExsB [Bacillus anthracis str. Ames]
gi|47501777|gb|AAT30453.1| exsB protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49178201|gb|AAT53577.1| exsB protein [Bacillus anthracis str. Sterne]
gi|164713865|gb|EDR19387.1| exsB protein [Bacillus anthracis str. A0488]
gi|167512757|gb|EDR88131.1| exsB protein [Bacillus anthracis str. A0193]
gi|167530206|gb|EDR92932.1| exsB protein [Bacillus anthracis str. A0442]
gi|170128855|gb|EDS97721.1| exsB protein [Bacillus anthracis str. A0389]
gi|170669183|gb|EDT19926.1| exsB protein [Bacillus anthracis str. A0465]
gi|172082718|gb|EDT67781.1| exsB protein [Bacillus anthracis str. A0174]
gi|190560771|gb|EDV14746.1| exsB protein [Bacillus anthracis Tsiankovskii-I]
gi|195991980|gb|EDX55943.1| exsB protein [Bacillus cereus W]
gi|218536698|gb|ACK89096.1| exsB protein [Bacillus cereus AH820]
gi|227003186|gb|ACP12929.1| protein ExsB [Bacillus anthracis str. CDC 684]
gi|229267652|gb|ACQ49289.1| exsB protein [Bacillus anthracis str. A0248]
Length = 220
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 148/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 111 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 171 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 207
>gi|293376552|ref|ZP_06622780.1| protein ExsB [Turicibacter sanguinis PC909]
gi|325839386|ref|ZP_08166825.1| protein ExsB [Turicibacter sp. HGF1]
gi|292644778|gb|EFF62860.1| protein ExsB [Turicibacter sanguinis PC909]
gi|325490506|gb|EGC92822.1| protein ExsB [Turicibacter sp. HGF1]
Length = 219
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 144/228 (63%), Gaps = 25/228 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+L+FSGGQDS+TCL WAL+ F V ++FDYGQR+ +ELEC + ++
Sbjct: 2 KQDKAVLVFSGGQDSTTCLYWALETFKEVIAVTFDYGQRHHLELECAKAICQE------- 54
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATL 122
LG E H+L +++L ++ ++LT++ +KI+ + LP+TFVPGRN++FL FA L
Sbjct: 55 ----LGVEHHVLDMSLLNQLAPNALTRD-EIKIELGEEGQLPSTFVPGRNLLFLSFAGVL 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TW+
Sbjct: 110 AKVKGAKHIITGVCETDFSGYPDCRDVFIKSLNVTLNLSMDDDFVIHTPLMWLNKAQTWE 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
LA +G I E++ TCY G G GC CPAC LR++G
Sbjct: 170 LADKLGK---FEYIREKTLTCYNGI------IGDGCGECPACVLRRRG 208
>gi|330684948|gb|EGG96627.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
VCU121]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 147/229 (64%), Gaps = 22/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F V ++F+YGQR+ E+E V KKI + +
Sbjct: 11 AIVVFSGGQDSTTCLFYAKKHFKDVILITFNYGQRHDAEIE----VAKKIAQ------EQ 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E HIL +++L ++ ++LT++ +KI+D + +PNTFVP RN++FL FA LAY++
Sbjct: 61 NVEHHILDMSLLSQLTPNALTQH-DLKIEDTEDGIPNTFVPARNLLFLSFAGALAYQIKA 119
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TW+LA ++G
Sbjct: 120 KHIITGVCETDFSGYPDCRDSFIKSMNVTLNLSMDRDFVIHTPLMWLDKAQTWELADNLG 179
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++N I E + TCY G G GC CPAC LR +G ++ K
Sbjct: 180 ---VLNYIRENTLTCYNGI------IGDGCGECPACQLRSRGLDQYLAK 219
>gi|242242079|ref|ZP_04796524.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis W23144]
gi|242234464|gb|EES36776.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis W23144]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 151/237 (63%), Gaps = 24/237 (10%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
ND+ K+ AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V KKI
Sbjct: 4 NDLNKE--KALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIE----VAKKIA 57
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN--LPNTFVPGRNIIFLVFA 119
K+ + HIL +++L ++ ++LT++ +KI+DN+ +PNTFVP RN++FL FA
Sbjct: 58 ------KEQNLKHHILDMSLLSQLTPNALTQH-ELKIEDNDDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQIHAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
TW L+ +G +++ I + TCY G G GC CPAC+LR +G + E
Sbjct: 171 TWALSDKLG---VLDYIRHNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 218
>gi|229138126|ref|ZP_04266724.1| hypothetical protein bcere0013_12500 [Bacillus cereus BDRD-ST26]
gi|229195636|ref|ZP_04322402.1| hypothetical protein bcere0001_12030 [Bacillus cereus m1293]
gi|228587885|gb|EEK45937.1| hypothetical protein bcere0001_12030 [Bacillus cereus m1293]
gi|228645471|gb|EEL01705.1| hypothetical protein bcere0013_12500 [Bacillus cereus BDRD-ST26]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAMEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|228984515|ref|ZP_04144692.1| hypothetical protein bthur0001_12200 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229155007|ref|ZP_04283121.1| hypothetical protein bcere0010_12010 [Bacillus cereus ATCC 4342]
gi|228628565|gb|EEK85278.1| hypothetical protein bcere0010_12010 [Bacillus cereus ATCC 4342]
gi|228775218|gb|EEM23607.1| hypothetical protein bthur0001_12200 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCATEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|160893111|ref|ZP_02073899.1| hypothetical protein CLOL250_00657 [Clostridium sp. L2-50]
gi|156865194|gb|EDO58625.1| hypothetical protein CLOL250_00657 [Clostridium sp. L2-50]
Length = 226
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 153/243 (62%), Gaps = 29/243 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K A+++FSGGQDS+TCL WAL ++ +V +SFDYGQ++ ELEC KKI E
Sbjct: 4 LKNRDEAVVVFSGGQDSTTCLLWALKKYKKVYAVSFDYGQKHIKELECA----KKIAE-- 57
Query: 65 PKWKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFA 119
G E HIL +++L ++ +SLT++ MK+ +N PNTFV GRN++FL F
Sbjct: 58 -----KFGVEHHILDMSLLNQLAPNSLTRS-EMKVDENAPEVGTPNTFVDGRNMVFLTFV 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A + G+++I+ GV ++D+SGYPDCR I+++ T +NL M+ + TPLMW+ K E
Sbjct: 112 AIYAKQKGVSDIITGVSQSDFSGYPDCRDIFIKSLNTTLNLAMDYEFDIITPLMWIDKME 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
TWKLA ++ G D +I + + TCY G G GC CP+C LR+KG +ME+K+
Sbjct: 172 TWKLADELDGLD---VIRDMTLTCYNGIP------GEGCGHCPSCKLRKKGYDLYMEYKK 222
Query: 237 KYQ 239
+
Sbjct: 223 NHN 225
>gi|118476910|ref|YP_894061.1| aluminum resistance protein [Bacillus thuringiensis str. Al Hakam]
gi|229090393|ref|ZP_04221636.1| hypothetical protein bcere0021_12220 [Bacillus cereus Rock3-42]
gi|118416135|gb|ABK84554.1| preQ(0) biosynthesis protein QueC [Bacillus thuringiensis str. Al
Hakam]
gi|228692976|gb|EEL46694.1| hypothetical protein bcere0021_12220 [Bacillus cereus Rock3-42]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|228900021|ref|ZP_04064257.1| hypothetical protein bthur0014_12300 [Bacillus thuringiensis IBL
4222]
gi|228907072|ref|ZP_04070936.1| hypothetical protein bthur0013_12450 [Bacillus thuringiensis IBL
200]
gi|228964403|ref|ZP_04125517.1| hypothetical protein bthur0004_12520 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228795260|gb|EEM42752.1| hypothetical protein bthur0004_12520 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228852576|gb|EEM97366.1| hypothetical protein bthur0013_12450 [Bacillus thuringiensis IBL
200]
gi|228859635|gb|EEN04059.1| hypothetical protein bthur0014_12300 [Bacillus thuringiensis IBL
4222]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAKIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|229029111|ref|ZP_04185209.1| hypothetical protein bcere0028_12130 [Bacillus cereus AH1271]
gi|228732209|gb|EEL83093.1| hypothetical protein bcere0028_12130 [Bacillus cereus AH1271]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDLEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|206977560|ref|ZP_03238454.1| exsB protein [Bacillus cereus H3081.97]
gi|217958916|ref|YP_002337464.1| exsB protein [Bacillus cereus AH187]
gi|222095073|ref|YP_002529133.1| aluminum resistance protein [Bacillus cereus Q1]
gi|254764306|sp|B7HK63|QUEC_BACC7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764307|sp|B9IUT0|QUEC_BACCQ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|206744278|gb|EDZ55691.1| exsB protein [Bacillus cereus H3081.97]
gi|217065877|gb|ACJ80127.1| exsB protein [Bacillus cereus AH187]
gi|221239131|gb|ACM11841.1| possible aluminum resistance protein [Bacillus cereus Q1]
Length = 220
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAMEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 111 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 171 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 207
>gi|228920152|ref|ZP_04083501.1| hypothetical protein bthur0011_11690 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228938555|ref|ZP_04101163.1| hypothetical protein bthur0008_12200 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228951821|ref|ZP_04113919.1| hypothetical protein bthur0006_12350 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228971434|ref|ZP_04132060.1| hypothetical protein bthur0003_12140 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978047|ref|ZP_04138426.1| hypothetical protein bthur0002_12510 [Bacillus thuringiensis Bt407]
gi|229016689|ref|ZP_04173622.1| hypothetical protein bcere0030_12600 [Bacillus cereus AH1273]
gi|229022901|ref|ZP_04179421.1| hypothetical protein bcere0029_12470 [Bacillus cereus AH1272]
gi|229043182|ref|ZP_04190905.1| hypothetical protein bcere0027_12360 [Bacillus cereus AH676]
gi|229068991|ref|ZP_04202284.1| hypothetical protein bcere0025_11990 [Bacillus cereus F65185]
gi|229078625|ref|ZP_04211182.1| hypothetical protein bcere0023_12900 [Bacillus cereus Rock4-2]
gi|229108896|ref|ZP_04238500.1| hypothetical protein bcere0018_11720 [Bacillus cereus Rock1-15]
gi|229126757|ref|ZP_04255769.1| hypothetical protein bcere0015_12140 [Bacillus cereus BDRD-Cer4]
gi|229144044|ref|ZP_04272460.1| hypothetical protein bcere0012_12070 [Bacillus cereus BDRD-ST24]
gi|229177847|ref|ZP_04305220.1| hypothetical protein bcere0005_12110 [Bacillus cereus 172560W]
gi|228605638|gb|EEK63086.1| hypothetical protein bcere0005_12110 [Bacillus cereus 172560W]
gi|228639441|gb|EEK95855.1| hypothetical protein bcere0012_12070 [Bacillus cereus BDRD-ST24]
gi|228656697|gb|EEL12523.1| hypothetical protein bcere0015_12140 [Bacillus cereus BDRD-Cer4]
gi|228674552|gb|EEL29792.1| hypothetical protein bcere0018_11720 [Bacillus cereus Rock1-15]
gi|228704695|gb|EEL57124.1| hypothetical protein bcere0023_12900 [Bacillus cereus Rock4-2]
gi|228714103|gb|EEL65985.1| hypothetical protein bcere0025_11990 [Bacillus cereus F65185]
gi|228726144|gb|EEL77378.1| hypothetical protein bcere0027_12360 [Bacillus cereus AH676]
gi|228738436|gb|EEL88912.1| hypothetical protein bcere0029_12470 [Bacillus cereus AH1272]
gi|228744597|gb|EEL94666.1| hypothetical protein bcere0030_12600 [Bacillus cereus AH1273]
gi|228781708|gb|EEM29907.1| hypothetical protein bthur0002_12510 [Bacillus thuringiensis Bt407]
gi|228788301|gb|EEM36254.1| hypothetical protein bthur0003_12140 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228807744|gb|EEM54265.1| hypothetical protein bthur0006_12350 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228821153|gb|EEM67170.1| hypothetical protein bthur0008_12200 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228839608|gb|EEM84900.1| hypothetical protein bthur0011_11690 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 223
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|322805870|emb|CBZ03435.1| queuosine Biosynthesis QueC ATPase [Clostridium botulinum H04402
065]
Length = 219
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C +C + I
Sbjct: 6 AIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYNI-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A +
Sbjct: 58 ----EHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAKQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 114 KGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMAY 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF+++Y
Sbjct: 174 DLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKEY 217
>gi|229189522|ref|ZP_04316538.1| hypothetical protein bcere0002_12010 [Bacillus cereus ATCC 10876]
gi|228593967|gb|EEK51770.1| hypothetical protein bcere0002_12010 [Bacillus cereus ATCC 10876]
Length = 223
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DKLGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|218234594|ref|YP_002366123.1| exsB protein [Bacillus cereus B4264]
gi|254764305|sp|B7HH96|QUEC_BACC4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218162551|gb|ACK62543.1| protein ExsB [Bacillus cereus B4264]
Length = 220
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 111 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWINKAETWKLS 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 171 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 207
>gi|269103133|ref|ZP_06155830.1| queuosine Biosynthesis QueC ATPase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163031|gb|EEZ41527.1| queuosine Biosynthesis QueC ATPase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 234
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + +++
Sbjct: 4 AVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAQAITQEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVGLLNELAISSLTRDNIAVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 115 AEAVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRPLRIETPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G D V E++ TCY G G GC CP+C LR+ G ++
Sbjct: 175 GKLDYVR---EKTLTCYNGI------IGDGCGDCPSCDLRRAGLEDY 212
>gi|319401215|gb|EFV89430.1| queuosine biosynthesis protein queC [Staphylococcus epidermidis
FRI909]
Length = 223
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 152/237 (64%), Gaps = 24/237 (10%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
ND+ K+ AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V KKI
Sbjct: 4 NDLNKE--KALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIE----VAKKIA 57
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN--LPNTFVPGRNIIFLVFA 119
K+ + HIL +++L ++ ++LT++ ++I+DN+ +PNTFVP RN++FL FA
Sbjct: 58 ------KEQNLKHHILDMSLLSQLTPNALTQH-ELQIEDNDDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR + I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQIHAKHIITGVCETDFSGYPDCRDNFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
TW L+ +G +++ I + TCY G G GC CPAC+LR +G + E
Sbjct: 171 TWALSDKLG---VLDYIRHNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 218
>gi|218896373|ref|YP_002444784.1| exsB protein [Bacillus cereus G9842]
gi|254764303|sp|B7IN35|QUEC_BACC2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218543833|gb|ACK96227.1| exsB protein [Bacillus cereus G9842]
Length = 220
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAKIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 111 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 171 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 207
>gi|42780532|ref|NP_977779.1| exsB protein [Bacillus cereus ATCC 10987]
gi|47566228|ref|ZP_00237256.1| exsB protein [Bacillus cereus G9241]
gi|49479999|ref|YP_035565.1| aluminum resistance protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52143996|ref|YP_082831.1| aluminum resistance protein [Bacillus cereus E33L]
gi|196040637|ref|ZP_03107936.1| protein ExsB [Bacillus cereus NVH0597-99]
gi|196046480|ref|ZP_03113705.1| exsB protein [Bacillus cereus 03BB108]
gi|225863303|ref|YP_002748681.1| exsB protein [Bacillus cereus 03BB102]
gi|301052979|ref|YP_003791190.1| putative aluminum resistance protein [Bacillus anthracis CI]
gi|81396767|sp|Q6HLK6|QUEC_BACHK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81569836|sp|Q73BG0|QUEC_BACC1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81688847|sp|Q63E31|QUEC_BACCZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189039061|sp|A0RBG1|QUEC_BACAH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764304|sp|C1EM49|QUEC_BACC3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|42736452|gb|AAS40387.1| exsB protein [Bacillus cereus ATCC 10987]
gi|47556781|gb|EAL15112.1| exsB protein [Bacillus cereus G9241]
gi|49331555|gb|AAT62201.1| possible aluminum resistance protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51977465|gb|AAU19015.1| possible aluminum resistance protein [Bacillus cereus E33L]
gi|196022664|gb|EDX61346.1| exsB protein [Bacillus cereus 03BB108]
gi|196028427|gb|EDX67035.1| protein ExsB [Bacillus cereus NVH0597-99]
gi|225785866|gb|ACO26083.1| protein ExsB [Bacillus cereus 03BB102]
gi|300375148|gb|ADK04052.1| possible aluminum resistance protein [Bacillus cereus biovar
anthracis str. CI]
gi|324325457|gb|ADY20717.1| aluminum resistance protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 220
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 111 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 171 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 207
>gi|127512990|ref|YP_001094187.1| exsB protein [Shewanella loihica PV-4]
gi|167016453|sp|A3QEN0|QUEC_SHELP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|126638285|gb|ABO23928.1| exsB protein [Shewanella loihica PV-4]
Length = 227
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+++D V ++FDYGQR+ E+ + K +
Sbjct: 4 AVVVFSGGQDSTTCLIQALNQYDEVHAVTFDYGQRHSEEIATAAKLAKDL---------K 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ IL + +L +++ S+LT++ V+ ++ DN LPNTFVPGRNI+FL A AY+LG
Sbjct: 55 VDSHKILDVTVLNELAISALTRDAIPVSNELMDNGLPNTFVPGRNILFLTLAGIYAYQLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+++ GVCETD+SGYPDCR I+A+++A+ GM+ + + TPLMWL K +TW LA
Sbjct: 115 AESVITGVCETDFSGYPDCRDSFIKAMQSALEQGMDRELKLVTPLMWLNKAQTWALADKY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+LV +++ TCY G G GC +CPAC LR KG ++
Sbjct: 175 HSLELVR---DQTLTCYNGI------VGSGCGTCPACLLRAKGLNDY 212
>gi|30019491|ref|NP_831122.1| aluminum resistance protein [Bacillus cereus ATCC 14579]
gi|206967667|ref|ZP_03228623.1| exsB protein [Bacillus cereus AH1134]
gi|296502021|ref|YP_003663721.1| aluminum resistance protein [Bacillus thuringiensis BMB171]
gi|81435436|sp|Q81G69|QUEC_BACCR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|29895035|gb|AAP08323.1| Aluminum resistance protein [Bacillus cereus ATCC 14579]
gi|206736587|gb|EDZ53734.1| exsB protein [Bacillus cereus AH1134]
gi|296323073|gb|ADH06001.1| aluminum resistance protein [Bacillus thuringiensis BMB171]
gi|326939064|gb|AEA14960.1| aluminum resistance protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 220
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 111 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 171 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 207
>gi|226940053|ref|YP_002795126.1| aluminum resistance protein [Laribacter hongkongensis HLHK9]
gi|254764355|sp|C1D6L0|QUEC_LARHH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|226714979|gb|ACO74117.1| aluminum resistance protein [Laribacter hongkongensis HLHK9]
Length = 229
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 138/236 (58%), Gaps = 27/236 (11%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D ++ AL++ SGGQDS+TCL WAL RF +V +SFDYGQR++VEL+ + +
Sbjct: 2 DSLRDPEHALVVLSGGQDSTTCLYWALSRFAQVSAISFDYGQRHRVELDA-----ARTIA 56
Query: 63 LMPKWKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNN----LPNTFVPGRNIIFLV 117
M G H I+P+ + ++LT + LPNTFVPGRN++FL
Sbjct: 57 AM------AGVGHTIIPINTFSALGGNALTDQQMSPDTGPDAETLLPNTFVPGRNLVFLT 110
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
FAA A+ GI +IV GV +TDYSGYPDCR +T+RA+E AINLGMES + +H PLM+L K
Sbjct: 111 FAAAWAWPRGIRHIVTGVAQTDYSGYPDCRENTLRALELAINLGMESRMRLHMPLMFLSK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+T LA+ +G L SHTCY G C C AC LR KG+ E
Sbjct: 171 ADTVTLARTVGAMP----ALAFSHTCYAGAVPP-------CGQCAACVLRAKGFAE 215
>gi|228990440|ref|ZP_04150405.1| hypothetical protein bpmyx0001_12020 [Bacillus pseudomycoides DSM
12442]
gi|228996541|ref|ZP_04156180.1| hypothetical protein bmyco0003_11280 [Bacillus mycoides Rock3-17]
gi|229004191|ref|ZP_04161992.1| hypothetical protein bmyco0002_11560 [Bacillus mycoides Rock1-4]
gi|228757052|gb|EEM06296.1| hypothetical protein bmyco0002_11560 [Bacillus mycoides Rock1-4]
gi|228763173|gb|EEM12081.1| hypothetical protein bmyco0003_11280 [Bacillus mycoides Rock3-17]
gi|228768966|gb|EEM17564.1| hypothetical protein bpmyx0001_12020 [Bacillus pseudomycoides DSM
12442]
Length = 223
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 146/226 (64%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAADIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACKLRKAG 210
>gi|323488451|ref|ZP_08093698.1| aluminum resistance protein [Planococcus donghaensis MPA1U2]
gi|323397958|gb|EGA90757.1| aluminum resistance protein [Planococcus donghaensis MPA1U2]
Length = 221
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 141/232 (60%), Gaps = 20/232 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ F V T++FDYGQR+ E+EC RK EL
Sbjct: 2 KNEKAVVVFSGGQDSTTCLFWAIKNFKEVATVTFDYGQRHSAEIEC---ARKIADELGVL 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+K +L + ++ +S ++LT++ + + ++ LP+TFVPGRN++FL FAA A
Sbjct: 59 FK-------VLDMTLINQLSANALTRDDIEVTAEEGELPSTFVPGRNLLFLSFAAVYADA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +++ GV +TD+SGYPDCR IR++ +NL M+ +HTPLMWL K + W+L+
Sbjct: 112 IGSRHLITGVSQTDFSGYPDCRDTFIRSLNVTLNLSMDKQFIIHTPLMWLDKADVWELSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G D V E++ TCY G GC CPAC LR +G ++ K
Sbjct: 172 TLGALDFVQ---EKTLTCYNGIPST------GCGECPACQLRNEGLARYQAK 214
>gi|229172079|ref|ZP_04299644.1| hypothetical protein bcere0006_11930 [Bacillus cereus MM3]
gi|228611422|gb|EEK68679.1| hypothetical protein bcere0006_11930 [Bacillus cereus MM3]
Length = 223
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 146/226 (64%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIKQFAEVEAVTFNYNQRHKLEIDCAAEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|24374047|ref|NP_718090.1| queuosine biosynthesis protein QueC [Shewanella oneidensis MR-1]
gi|81461394|sp|Q8EE85|QUEC_SHEON RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24348521|gb|AAN55534.1|AE015692_4 exsB protein [Shewanella oneidensis MR-1]
Length = 238
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 142/221 (64%), Gaps = 21/221 (9%)
Query: 17 GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
GGQDS+TCL AL ++D V ++FDYGQR++ E++ V K + + + ++ +
Sbjct: 14 GGQDSTTCLIQALTQYDEVHGITFDYGQRHREEID----VAKSLAQRL-----NITSHKV 64
Query: 77 LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG I+
Sbjct: 65 MDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLGAEAIIT 124
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
GVCETD+SGYPDCRHD +RA+E+A+ GM+ + + TPLMWL K +TW LA DLV
Sbjct: 125 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLNIITPLMWLNKAQTWALADKYQQLDLV 184
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ TCY G G GC CPAC+LRQ+G ++
Sbjct: 185 R---HHTLTCYNGI------VGDGCGDCPACHLRQRGLDDY 216
>gi|59712187|ref|YP_204963.1| queuosine biosynthesis protein QueC [Vibrio fischeri ES114]
gi|75353773|sp|Q5E4H1|QUEC_VIBF1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|59480288|gb|AAW86075.1| queuosine biosynthesis protein QueC [Vibrio fischeri ES114]
Length = 227
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 147/234 (62%), Gaps = 26/234 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMPKWK 68
+A+++FSGGQDS+TCL AL ++D V ++FDYGQR+ E+E V KK+ +EL
Sbjct: 3 TAIVVFSGGQDSTTCLIQALTQYDHVHCITFDYGQRHNQEIE----VAKKVSIEL----- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GAASHKVMDVGLLNELAVSSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG ++ GVCETD+SGYPDCR + +++I ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 113 LGAEAVITGVCETDFSGYPDCRDEFVKSINQSLVLGMDRQLEIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
G D V + TCY G G GC CP+C LR+ G ++E KE
Sbjct: 173 KYGKLDYVR---NHTLTCYNGV------IGDGCGDCPSCDLRKNGLDAYLENKE 217
>gi|197334729|ref|YP_002156396.1| ExsB protein [Vibrio fischeri MJ11]
gi|254764390|sp|B5FF08|QUEC_VIBFM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|197316219|gb|ACH65666.1| ExsB protein [Vibrio fischeri MJ11]
Length = 227
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 145/234 (61%), Gaps = 24/234 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+++FSGGQDS+TCL AL ++D V ++FDYGQR+ E+E +K +EL
Sbjct: 3 TAIVVFSGGQDSTTCLIQALTQYDHVHCITFDYGQRHNQEIEV---AKKVAIEL------ 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+L
Sbjct: 54 GAASHKVMDVGLLNELAVSSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + +++I ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 114 GAEAVLTGVCETDFSGYPDCRDEFVKSINQSLVLGMDRQLEIKTPLMWLNKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEK 237
G D V + TCY G G GC CP+C LR+ G ++E KE
Sbjct: 174 YGKLDYVR---NHTLTCYNGV------IGDGCGDCPSCDLRKNGLDAYLENKES 218
>gi|89073465|ref|ZP_01159988.1| putative exsB protein [Photobacterium sp. SKA34]
gi|89050729|gb|EAR56210.1| putative exsB protein [Photobacterium sp. SKA34]
Length = 231
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K +
Sbjct: 4 AVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAEAIAKDL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVGLLNELAISSLTRDNIAVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + ++++ ++ LGM+ +T+ TPLMWL K ETW LA
Sbjct: 115 AETVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRPLTIATPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V E++ TCY G G GC CP+C LR+ G ++
Sbjct: 175 QKLDYVR---EKTLTCYNGI------IGDGCGDCPSCDLRRAGLNDY 212
>gi|90579979|ref|ZP_01235787.1| putative exsB protein [Vibrio angustum S14]
gi|90438864|gb|EAS64047.1| putative exsB protein [Vibrio angustum S14]
Length = 231
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K +
Sbjct: 4 AVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAEAIAKDL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVGLLNELAISSLTRDNIAVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + ++++ ++ LGM+ +T+ TPLMWL K ETW LA
Sbjct: 115 AETVITGVCETDFSGYPDCRDEFVKSLNQSLILGMDRPLTIATPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V E++ TCY G G GC CP+C LR+ G ++
Sbjct: 175 QKLDYVR---EKTLTCYNGI------IGDGCGDCPSCDLRRAGLNDY 212
>gi|251798293|ref|YP_003013024.1| exsB protein [Paenibacillus sp. JDR-2]
gi|247545919|gb|ACT02938.1| exsB protein [Paenibacillus sp. JDR-2]
Length = 221
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 141/226 (62%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL+R++ VE ++F+YGQR+ +ELEC +
Sbjct: 2 KKGKAVVVFSGGQDSTTCLFWALERYEEVEAVTFNYGQRHALELEC-----------AAQ 50
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ LG H+L +++L ++ ++LT+ ++ ++ Q+ LP TFV GRN++FL FAA LA
Sbjct: 51 IAEELGVRHHVLDMSLLNQLAPNALTRPDIEIEQQEGGLPTTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW LA
Sbjct: 111 QIGARAIVTGVCETDFSGYPDCRDIFIKSLNVTLNLSMDYPFVIETPLMWLDKAETWGLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G + V ++ TCY G GC CPAC LR +G
Sbjct: 171 DQLGAFEYVR---TKTLTCYNGVIAD------GCGECPACKLRSQG 207
>gi|153939170|ref|YP_001390902.1| ExsB protein [Clostridium botulinum F str. Langeland]
gi|189038908|sp|A7GDP2|QUEC_CLOBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|152935066|gb|ABS40564.1| ExsB protein [Clostridium botulinum F str. Langeland]
gi|295318964|gb|ADF99341.1| ExsB protein [Clostridium botulinum F str. 230613]
Length = 219
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 142/233 (60%), Gaps = 27/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C +C + I
Sbjct: 6 AIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYNI-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A +
Sbjct: 58 ----EHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAKQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 114 KGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMAY 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF EKY
Sbjct: 174 DLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEF-EKY 216
>gi|170754738|ref|YP_001781193.1| ExsB protein [Clostridium botulinum B1 str. Okra]
gi|254764324|sp|B1IL95|QUEC_CLOBK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169119950|gb|ACA43786.1| ExsB protein [Clostridium botulinum B1 str. Okra]
Length = 219
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 142/233 (60%), Gaps = 27/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C +C + I
Sbjct: 6 AIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYNI-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A +
Sbjct: 58 ----EHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAKQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 114 KGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMAY 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF EKY
Sbjct: 174 DLGVLDIVK---EETLTCYNGIK------ADGCGECPACNLRKKGYLEF-EKY 216
>gi|168182490|ref|ZP_02617154.1| protein ExsB [Clostridium botulinum Bf]
gi|237794900|ref|YP_002862452.1| exsB protein [Clostridium botulinum Ba4 str. 657]
gi|259551497|sp|C3KVW4|QUEC_CLOB6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|182674375|gb|EDT86336.1| protein ExsB [Clostridium botulinum Bf]
gi|229261676|gb|ACQ52709.1| exsB protein [Clostridium botulinum Ba4 str. 657]
Length = 219
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 142/233 (60%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+ELEC +C + I
Sbjct: 6 AIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELECAKDICKKYNI-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E IL L +L ++ +SLT+ V +PN+FV GRN++FL F A A +
Sbjct: 58 ----EHKILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAKQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 114 RGINAIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEILTPLMWINKAETWKMAY 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF+++Y
Sbjct: 174 DLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKEY 217
>gi|148379524|ref|YP_001254065.1| hypothetical protein CBO1557 [Clostridium botulinum A str. ATCC
3502]
gi|153933891|ref|YP_001383901.1| exsB protein [Clostridium botulinum A str. ATCC 19397]
gi|153936103|ref|YP_001387449.1| exsB protein [Clostridium botulinum A str. Hall]
gi|189038905|sp|A7FU68|QUEC_CLOB1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189038907|sp|A5I232|QUEC_CLOBH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148289008|emb|CAL83097.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
gi|152929935|gb|ABS35435.1| exsB protein [Clostridium botulinum A str. ATCC 19397]
gi|152932017|gb|ABS37516.1| exsB protein [Clostridium botulinum A str. Hall]
Length = 219
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 142/233 (60%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C +C + I
Sbjct: 6 AIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYNI-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A +
Sbjct: 58 ----EHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAKQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 114 KGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMAY 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG+ EF+++Y
Sbjct: 174 DLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYWEFEKEY 217
>gi|27467405|ref|NP_764042.1| hypothetical protein SE0487 [Staphylococcus epidermidis ATCC 12228]
gi|57866294|ref|YP_187969.1| exsB protein [Staphylococcus epidermidis RP62A]
gi|251810142|ref|ZP_04824615.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875712|ref|ZP_06284583.1| protein ExsB [Staphylococcus epidermidis SK135]
gi|293368168|ref|ZP_06614798.1| transcription regulator ExsB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|81675233|sp|Q5HR20|QUEC_STAEQ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81844015|sp|Q8CTH8|QUEC_STAES RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|27314948|gb|AAO04084.1|AE016745_183 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57636952|gb|AAW53740.1| exsB protein [Staphylococcus epidermidis RP62A]
gi|251806334|gb|EES58991.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295739|gb|EFA88262.1| protein ExsB [Staphylococcus epidermidis SK135]
gi|291317702|gb|EFE58118.1| transcription regulator ExsB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329735600|gb|EGG71884.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
VCU045]
gi|329736844|gb|EGG73109.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
VCU028]
Length = 223
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 150/236 (63%), Gaps = 22/236 (9%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
ND+ K+ AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V KKI
Sbjct: 4 NDLNKE--KALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDKEIE----VAKKIA 57
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
K+ + HIL +++L ++ ++LT++ ++++ D+ +PNTFVP RN++FL FA
Sbjct: 58 ------KEQNLKHHILDMSLLSQLTPNALTQHELSIEDNDDGIPNTFVPARNLLFLSFAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAY++ +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +T
Sbjct: 112 ALAYQIHAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQT 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
W L+ +G +++ I + TCY G G GC CPAC+LR +G + E
Sbjct: 172 WALSDKLG---VLDYIRHNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 218
>gi|229002866|ref|ZP_04160742.1| hypothetical protein bmyco0003_57960 [Bacillus mycoides Rock3-17]
gi|229008540|ref|ZP_04165967.1| hypothetical protein bmyco0002_53200 [Bacillus mycoides Rock1-4]
gi|228752735|gb|EEM02336.1| hypothetical protein bmyco0002_53200 [Bacillus mycoides Rock1-4]
gi|228758391|gb|EEM07562.1| hypothetical protein bmyco0003_57960 [Bacillus mycoides Rock3-17]
Length = 221
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 144/222 (64%), Gaps = 22/222 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + +
Sbjct: 7 AIVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDC-----------AAEIANE 55
Query: 71 LGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA ++G
Sbjct: 56 LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQVGA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWK+A ++G
Sbjct: 116 HHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKIADELG 175
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ V E++ TCY G G GC CPAC LR+ G
Sbjct: 176 AFEFVR---EKTLTCYNGI------IGNGCGECPACQLRKAG 208
>gi|330445417|ref|ZP_08309069.1| 7-cyano-7-deazaguanine synthase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489608|dbj|GAA03566.1| 7-cyano-7-deazaguanine synthase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 232
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 142/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K +
Sbjct: 4 AVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAEAIAKDL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VTAHKVMDVGLLNELAISSLTRDNIAVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 115 AETVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRQLKIDTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V E++ TCY G G GC +CP+C LR+ G ++
Sbjct: 175 SKLDYVR---EKTLTCYNGI------IGDGCGNCPSCDLRRAGLNDY 212
>gi|315645651|ref|ZP_07898775.1| exsB protein [Paenibacillus vortex V453]
gi|315279129|gb|EFU42439.1| exsB protein [Paenibacillus vortex V453]
Length = 225
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 138/224 (61%), Gaps = 19/224 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL W +RF VET++FDYGQR+K+E+EC + K
Sbjct: 3 KNEKAVVVFSGGQDSTTCLFWTKERFAEVETVTFDYGQRHKLEIECAAQIAK-------- 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + +L +++L ++ ++LT++ + + LP TFV GRN++FL FAA LA
Sbjct: 55 --EQGVKQTVLDMSLLNQLAPNALTRSDIEIAEGDGLPTTFVDGRNLLFLSFAAVLAKGA 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW+LA
Sbjct: 113 GAKHLITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKSETWELADQ 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ + V + + TCY G + G GC CPAC LR+ G
Sbjct: 173 MNALEYVR---DHTLTCYNGIK------GDGCGECPACKLRKAG 207
>gi|145298761|ref|YP_001141602.1| hypothetical protein ASA_1775 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|254764293|sp|A4SLT2|QUEC_AERS4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|142851533|gb|ABO89854.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 237
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 142/223 (63%), Gaps = 21/223 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E+E R+ +
Sbjct: 6 AVVVFSGGQDSTTCLVQALAHYDEVHAITFDYGQRHREEIET---ARRLATQF------G 56
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ S+LT++ V+ ++QDN LPNTFVPGRNI+FL A+ AY++G
Sbjct: 57 IAAHKVMDVTLLNELAVSALTRDEIPVSGELQDNGLPNTFVPGRNILFLTLASIYAYQVG 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + ++++ A++LG++ + TPLMWL K ETW LA
Sbjct: 117 AEAVITGVCETDFSGYPDCRDEFVKSLNQAVSLGLDRCIRFETPLMWLDKAETWALADYY 176
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
G + V +++ TCY G G GC +CPAC LR +G
Sbjct: 177 GHLETVR---QQTLTCYNGIA------GDGCGTCPACELRSRG 210
>gi|170760165|ref|YP_001786978.1| exsB protein [Clostridium botulinum A3 str. Loch Maree]
gi|254764325|sp|B1L1S2|QUEC_CLOBM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169407154|gb|ACA55565.1| exsB protein [Clostridium botulinum A3 str. Loch Maree]
Length = 219
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 144/233 (61%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL WA +++ V +SFDY Q++K+EL+C +C + +
Sbjct: 6 AIVVFSGGQDSTTCLFWAKKKYEEVIAVSFDYNQKHKLELDCAKDICKKYNV-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A +
Sbjct: 58 ----EHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAKQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+ I+ GV ++D+SGYPDCR I+++ ++L M+ + TPLMW+ K ETWK+A
Sbjct: 114 KGVNTIITGVSQSDFSGYPDCRAVFIKSLNVTLDLAMDYEFEIITPLMWINKAETWKMAY 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF++++
Sbjct: 174 DLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKQF 217
>gi|29346976|ref|NP_810479.1| putative aluminum resistance protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338874|gb|AAO76673.1| putative aluminum resistance protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 220
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 142/232 (61%), Gaps = 24/232 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 6 TALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAEVEF----- 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT + Q+ ++PNTFVPGRN+ FL AA A
Sbjct: 61 ------DVMDVSFIGTLGHNSLTDTTMVMDQEKPAGSVPNTFVPGRNLFFLSIAAVYARE 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 115 RGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++LI E+ TCY G + G GC CPAC LR++G ++ +K
Sbjct: 175 ELG---VLDLIRNETLTCYNGIQ------GDGCGHCPACTLRREGLEKYLKK 217
>gi|90414825|ref|ZP_01222792.1| putative exsB protein [Photobacterium profundum 3TCK]
gi|90324068|gb|EAS40655.1| putative exsB protein [Photobacterium profundum 3TCK]
Length = 232
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL A++ +D V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLIQAIENYDEVHCITFDYGQRHKLEIEVAQSITKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL + AY++G
Sbjct: 55 ITAHKVMDVGLLNELAISSLTRDNIAVSHELQANGLPNSFVPGRNILFLTLSGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 115 AEAVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRALKIETPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V E++ TCY G G GC CP+C LR+ G ++
Sbjct: 175 KQLDFVR---EKTLTCYNGI------IGDGCGDCPSCDLRRAGLEDY 212
>gi|229114878|ref|ZP_04244291.1| hypothetical protein bcere0017_11750 [Bacillus cereus Rock1-3]
gi|228668570|gb|EEL23999.1| hypothetical protein bcere0017_11750 [Bacillus cereus Rock1-3]
Length = 223
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K +TWKL+
Sbjct: 114 QVEARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKADTWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|253572607|ref|ZP_04850008.1| queuosine biosynthesis protein queC [Bacteroides sp. 1_1_6]
gi|298386365|ref|ZP_06995921.1| ExsB protein [Bacteroides sp. 1_1_14]
gi|110816211|sp|Q8A7F8|QUEC_BACTN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|251837739|gb|EES65829.1| queuosine biosynthesis protein queC [Bacteroides sp. 1_1_6]
gi|298260742|gb|EFI03610.1| ExsB protein [Bacteroides sp. 1_1_14]
Length = 219
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 142/232 (61%), Gaps = 24/232 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 5 TALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAEVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT + Q+ ++PNTFVPGRN+ FL AA A
Sbjct: 60 ------DVMDVSFIGTLGHNSLTDTTMVMDQEKPAGSVPNTFVPGRNLFFLSIAAVYARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 114 RGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++LI E+ TCY G + G GC CPAC LR++G ++ +K
Sbjct: 174 ELG---VLDLIRNETLTCYNGIQ------GDGCGHCPACTLRREGLEKYLKK 216
>gi|228995353|ref|ZP_04155038.1| hypothetical protein bpmyx0001_59560 [Bacillus pseudomycoides DSM
12442]
gi|228764395|gb|EEM13258.1| hypothetical protein bpmyx0001_59560 [Bacillus pseudomycoides DSM
12442]
Length = 221
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 144/222 (64%), Gaps = 22/222 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + +
Sbjct: 7 AIVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDC-----------AAEIANE 55
Query: 71 LGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA ++G
Sbjct: 56 LGIKHTVLDMSLLNQLAPNALTRTDMEITHEECELPSTFVDGRNLLFLSFAAVLAKQVGA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWK+A ++G
Sbjct: 116 HHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKIADELG 175
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ V E++ TCY G G GC CPAC LR+ G
Sbjct: 176 AFEFVR---EKTLTCYNGI------IGNGCGECPACQLRKAG 208
>gi|226948888|ref|YP_002803979.1| ExsB protein [Clostridium botulinum A2 str. Kyoto]
gi|254764323|sp|C1FN27|QUEC_CLOBJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|226843177|gb|ACO85843.1| ExsB protein [Clostridium botulinum A2 str. Kyoto]
Length = 219
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 141/233 (60%), Gaps = 27/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C +C + I
Sbjct: 6 AIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYNI-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A +
Sbjct: 58 ----EHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAKQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 114 KGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMAY 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG+ EF EKY
Sbjct: 174 DLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYWEF-EKY 216
>gi|255693847|ref|ZP_05417522.1| ExsB protein [Bacteroides finegoldii DSM 17565]
gi|260620332|gb|EEX43203.1| ExsB protein [Bacteroides finegoldii DSM 17565]
Length = 219
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 142/235 (60%), Gaps = 25/235 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 5 AALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVEFAREIARKAEVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT + Q+ + +PNTFVPGRN+ FL AA A
Sbjct: 60 ------DVMDVSFVGQLGHNSLTDTTMVMDQEKPADTVPNTFVPGRNLFFLSIAAVYARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 114 RGINHLVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEKYQ 239
++G ++ LI E+ TCY G + G GC CPAC LR++G ++ K K Q
Sbjct: 174 ELG---VLELIRNETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLKSKNQ 219
>gi|160886302|ref|ZP_02067305.1| hypothetical protein BACOVA_04309 [Bacteroides ovatus ATCC 8483]
gi|260173585|ref|ZP_05759997.1| putative aluminum resistance protein [Bacteroides sp. D2]
gi|298484367|ref|ZP_07002527.1| ExsB protein [Bacteroides sp. D22]
gi|299146794|ref|ZP_07039862.1| ExsB protein [Bacteroides sp. 3_1_23]
gi|315921850|ref|ZP_07918090.1| queuosine biosynthesis protein queC [Bacteroides sp. D2]
gi|156108187|gb|EDO09932.1| hypothetical protein BACOVA_04309 [Bacteroides ovatus ATCC 8483]
gi|298269478|gb|EFI11079.1| ExsB protein [Bacteroides sp. D22]
gi|298517285|gb|EFI41166.1| ExsB protein [Bacteroides sp. 3_1_23]
gi|313695725|gb|EFS32560.1| queuosine biosynthesis protein queC [Bacteroides sp. D2]
Length = 219
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 143/235 (60%), Gaps = 25/235 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 5 AALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAEVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT + Q+ +++PNTFVPGRN+ FL AA A
Sbjct: 60 ------DVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 114 RGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEKYQ 239
++G ++ LI E+ TCY G + G GC CPAC LR++G ++ K K Q
Sbjct: 174 ELG---VLELIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKYLKSKNQ 219
>gi|237723138|ref|ZP_04553619.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293372679|ref|ZP_06619061.1| protein ExsB [Bacteroides ovatus SD CMC 3f]
gi|229447660|gb|EEO53451.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292632488|gb|EFF51084.1| protein ExsB [Bacteroides ovatus SD CMC 3f]
Length = 219
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 143/235 (60%), Gaps = 25/235 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 5 AALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAEVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT + Q+ +++PNTFVPGRN+ FL AA A
Sbjct: 60 ------DVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 114 RGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEKYQ 239
++G ++ LI E+ TCY G + G GC CPAC LR++G ++ K K Q
Sbjct: 174 ELG---VLGLIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKYLKSKNQ 219
>gi|268315893|ref|YP_003289612.1| exsB protein [Rhodothermus marinus DSM 4252]
gi|262333427|gb|ACY47224.1| exsB protein [Rhodothermus marinus DSM 4252]
Length = 238
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 25/235 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+L SGGQDS+TCL WAL F +VE L F YGQ++ VELE +KI D
Sbjct: 18 TALVLLSGGQDSTTCLYWALHYFPKVEALGFHYGQKHAVELE----QARKIA-------D 66
Query: 70 SLGEDHILPLAIL---GDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
G +P +L G + S+LT++ A +LP FVPGRN +FL AA+
Sbjct: 67 RAG----VPFTVLDLRGLLRGSALTEHEQDVSAAHPLAPHLPAAFVPGRNALFLTLAASY 122
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+ GI ++V G+C+TDYSGYPDCR + I A+E A++L +++ + +HTPLM L K ETW+
Sbjct: 123 GFTRGIHDLVGGMCQTDYSGYPDCRREFIDAMERALSLALDTPIRIHTPLMHLTKAETWR 182
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA+++G ++++I+E +HT Y G R +R+ WGYG PA LR +G+ E K +
Sbjct: 183 LARELG---ILDVIVELTHTDYNGDRSERHPWGYGRLDNPASILRARGYEEAKAR 234
>gi|54308161|ref|YP_129181.1| queuosine biosynthesis protein QueC [Photobacterium profundum SS9]
gi|81400103|sp|Q6LTJ7|QUEC_PHOPR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|46912589|emb|CAG19379.1| putative exsB protein [Photobacterium profundum SS9]
Length = 232
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL A+ +D V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLIQAIKNYDEVHCITFDYGQRHKLEIEVAQSITKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL + AY++G
Sbjct: 55 ITAHKVMDVGLLNELAISSLTRDNIEVSHELQANGLPNSFVPGRNILFLTLSGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR + ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 115 AEAVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRALKIETPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V E++ TCY G G GC +CP+C LR+ G ++
Sbjct: 175 KQLDFVR---EKTLTCYNGI------IGDGCGNCPSCDLRRAGLEDY 212
>gi|254246871|ref|ZP_04940192.1| hypothetical protein BCPG_01642 [Burkholderia cenocepacia PC184]
gi|124871647|gb|EAY63363.1| hypothetical protein BCPG_01642 [Burkholderia cenocepacia PC184]
Length = 156
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 112/142 (78%)
Query: 90 LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHD 149
+T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+ +V G+CETD+SGYPDCR D
Sbjct: 1 MTRMIEIETTANGLPNTFVPGRNLMFMTIAAAIAYRRGLRVLVGGMCETDFSGYPDCRDD 60
Query: 150 TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
T++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG+ LV LI E+HTCY+G+R
Sbjct: 61 TMKALQVALNLGMDTRMVLETPLMWLDKAQTWQLAEQLGGEALVELIRVETHTCYVGERA 120
Query: 210 KRYEWGYGCNSCPACYLRQKGW 231
+ ++WG+GC CPAC LR++G+
Sbjct: 121 ELHDWGFGCGECPACKLRKRGY 142
>gi|209695424|ref|YP_002263353.1| queuosine biosynthesis protein QueC [Aliivibrio salmonicida
LFI1238]
gi|254764296|sp|B6EH68|QUEC_ALISL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|208009376|emb|CAQ79650.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 227
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 141/228 (61%), Gaps = 21/228 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+++FSGGQDS+TCL AL +D V ++FDYGQR+ E+E V + K
Sbjct: 3 TAIVVFSGGQDSTTCLIQALTHYDHVHCITFDYGQRHNQEIEVAKSVALDLGATSHK--- 59
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+L
Sbjct: 60 ------VMDVGLLNELAVSSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR + +++I ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 114 GAESVITGVCETDFSGYPDCRDEFVKSINQSLVLGMDRKLKIDTPLMWLNKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G D V ++ TCY G G GC CP+C LR+ G ++
Sbjct: 174 YGKLDYVR---NQTLTCYNGV------IGDGCGDCPSCDLRKNGLDDY 212
>gi|295703391|ref|YP_003596466.1| queuosine biosynthesis protein QueC [Bacillus megaterium DSM 319]
gi|294801050|gb|ADF38116.1| queuosine biosynthesis protein QueC [Bacillus megaterium DSM 319]
Length = 221
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 25/235 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F VET++F YGQR+ E+E V K I
Sbjct: 3 KNEKAIVVFSGGQDSTTCLFWALKNFKEVETVTFQYGQRHSQEIE----VAKAIAA---- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT++ + ++ ++ LP TFV GRN++FL FAA LA
Sbjct: 55 ---DLGVKHTVLDMSLLNQLAPNALTRDDIEIEQKEGELPTTFVDGRNLLFLSFAAVLAK 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 112 NSGGRHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDFEFVIHTPLMWIDKAETWALA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
++G + V E++ TCY G GC CPAC LR++G +M+ KE
Sbjct: 172 DELGALEYVR---EKTLTCYNGI------VADGCGECPACQLRKRGLDQYMQTKE 217
>gi|212639795|ref|YP_002316315.1| putative PP-loop superfamily ATPase [Anoxybacillus flavithermus
WK1]
gi|254764299|sp|B7GLA4|QUEC_ANOFW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|212561275|gb|ACJ34330.1| Predicted PP-loop superfamily ATPase [Anoxybacillus flavithermus
WK1]
Length = 221
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 144/230 (62%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA F VE ++FDY QR+++E++ + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAKKHFAEVEAVTFDYNQRHRLEIDVAASIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
L H +L +++L ++ ++LT+ ++A++ ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LNVSHTVLDMSLLHQLAPNALTRSDIAIEQKEGQLPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA
Sbjct: 111 QKGARHLVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYQFVIHTPLMWLNKAETWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G + V ++ TCY G GC CPAC LR++G ++
Sbjct: 171 DELGALEFVR---NKTLTCYNGI------IADGCGECPACVLRKRGLDQY 211
>gi|223043070|ref|ZP_03613118.1| ExsB protein [Staphylococcus capitis SK14]
gi|222443924|gb|EEE50021.1| ExsB protein [Staphylococcus capitis SK14]
Length = 223
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 142/227 (62%), Gaps = 20/227 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V KKI +
Sbjct: 11 AIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIE----VAKKIA------NEQ 60
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ HIL +++L ++ ++LT+ ++ ++ D+ +PNTFVP RN++FL FA LAY+L
Sbjct: 61 NLKHHILDMSLLSQLTPNALTQHDLEIEENDDGIPNTFVPARNLLFLSFAGALAYQLNAK 120
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +TW+L+ ++G
Sbjct: 121 HIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQTWELSDELGV 180
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
D V + TCY G G GC CPAC LR +G + E
Sbjct: 181 LDYVR---HNTLTCYNGV------IGDGCGECPACKLRARGLHHYLE 218
>gi|294498041|ref|YP_003561741.1| queuosine biosynthesis protein QueC [Bacillus megaterium QM B1551]
gi|294347978|gb|ADE68307.1| queuosine biosynthesis protein QueC [Bacillus megaterium QM B1551]
Length = 220
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 25/235 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F VET++F YGQR+ E+E V K I
Sbjct: 2 KNEKAIVVFSGGQDSTTCLFWALKNFKEVETVTFQYGQRHSQEIE----VAKAIAA---- 53
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT++ + ++ ++ LP TFV GRN++FL FAA LA
Sbjct: 54 ---DLGVKHTVLDMSLLNQLAPNALTRDDIEIEQKEGELPTTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 111 NSGGRHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDFEFVIHTPLMWIDKAETWALA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
++G + V E++ TCY G GC CPAC LR++G +M+ KE
Sbjct: 171 DELGALEYVR---EKTLTCYNGI------VADGCGECPACQLRKRGLDQYMQTKE 216
>gi|164506981|gb|ABY59726.1| aluminum resistance protein [Anoxybacillus gonensis]
Length = 221
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 144/230 (62%), Gaps = 22/230 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA F VE ++FDY QR+++E++ + K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAKKHFAEVEAVTFDYNQRHRLEIDVAASIAKE------- 54
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
L H +L +++L ++ ++LT+ ++A++ ++ LP+TFV GRN++FL FAA LA
Sbjct: 55 ----LNVPHTVLDMSLLNQLAPNALTRSDIAIEQKEGQLPSTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA
Sbjct: 111 QKGARHLVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYQFVIHTPLMWLNKAETWKLA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G + V ++ TCY G GC CPAC LR++G ++
Sbjct: 171 DELGALEFVR---NKTLTCYNGI------IADGCGECPACVLRKRGLDQY 211
>gi|229102039|ref|ZP_04232752.1| hypothetical protein bcere0019_12040 [Bacillus cereus Rock3-28]
gi|228681426|gb|EEL35590.1| hypothetical protein bcere0019_12040 [Bacillus cereus Rock3-28]
Length = 223
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 147/226 (65%), Gaps = 22/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEIIHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K +TWKL+
Sbjct: 114 QVEARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKADTWKLS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++G + V E++ TCY G G GC CPAC LR+ G
Sbjct: 174 DELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAG 210
>gi|164686486|ref|ZP_02210514.1| hypothetical protein CLOBAR_00051 [Clostridium bartlettii DSM
16795]
gi|164604497|gb|EDQ97962.1| hypothetical protein CLOBAR_00051 [Clostridium bartlettii DSM
16795]
Length = 224
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 142/224 (63%), Gaps = 25/224 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WAL+RFD+V ++F+Y Q++K+E+EC + K+
Sbjct: 9 AVVVFSGGQDSTTCLFWALERFDKVIAVTFNYNQKHKLEIECAKNIAKE----------- 57
Query: 71 LG-EDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG E HIL + +L ++ ++LT++ +KI+ D LP+TFV GRN++FL FAA LA
Sbjct: 58 LGVEHHILDMDLLNQLAPNALTRD-DIKIEEGKDGELPSTFVEGRNMVFLTFAAILAKTK 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+IV GVCETD+SGYPDCR ++++ NL M+ +HTPLMWL K +TW+LA
Sbjct: 117 NARHIVTGVCETDFSGYPDCRDVFVKSLNVTANLAMDYDFVMHTPLMWLDKAQTWELADK 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
G + V E++ TCY G G GC CP+C LRQ G
Sbjct: 177 YGKLEYVR---EKTLTCYNGI------IGDGCGECPSCKLRQHG 211
>gi|237714947|ref|ZP_04545428.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262409102|ref|ZP_06085647.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_22]
gi|294645237|ref|ZP_06722954.1| protein ExsB [Bacteroides ovatus SD CC 2a]
gi|294809854|ref|ZP_06768533.1| protein ExsB [Bacteroides xylanisolvens SD CC 1b]
gi|229444780|gb|EEO50571.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262353313|gb|EEZ02408.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_22]
gi|292639415|gb|EFF57716.1| protein ExsB [Bacteroides ovatus SD CC 2a]
gi|294442940|gb|EFG11728.1| protein ExsB [Bacteroides xylanisolvens SD CC 1b]
Length = 219
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 142/235 (60%), Gaps = 25/235 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 5 AALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVEFAREIARKAEVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT + Q+ +++PNTFVPGRN+ FL AA A
Sbjct: 60 ------DVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 114 RGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEKYQ 239
+G ++ LI E+ TCY G + G GC CPAC LR++G ++ K K Q
Sbjct: 174 KLG---VLELIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKYLKSKNQ 219
>gi|317492902|ref|ZP_07951326.1| exsB protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919024|gb|EFV40359.1| exsB protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 246
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 140/231 (60%), Gaps = 20/231 (8%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A+++FSGGQDS+TCL ALD++D V ++FDYGQR++ E++ R ++L
Sbjct: 17 KAMKRAVVVFSGGQDSTTCLIQALDQYDEVHCITFDYGQRHRAEIDV---ARDLAIKL-- 71
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT+ N+ + + ++ +PNTFVPGRNI+FL AA A
Sbjct: 72 ----GASAHKVLDVGLLNELAISSLTRDNIPVPTESEDGIPNTFVPGRNILFLTLAAIYA 127
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI LGM V TPLMWL K ETW L
Sbjct: 128 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNKAITLGMARDVRFETPLMWLNKAETWAL 187
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A DLV E+ TCY G + G GC C AC+LR G E+
Sbjct: 188 ADHYQKLDLVR---RETLTCYNGIQ------GDGCGECAACHLRSHGLNEY 229
>gi|295087937|emb|CBK69460.1| preQ(0) biosynthesis protein QueC [Bacteroides xylanisolvens XB1A]
Length = 219
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 142/235 (60%), Gaps = 25/235 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 5 AALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAEVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT + Q+ +++PNTFVPGRN+ FL AA A
Sbjct: 60 ------DVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 114 RGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEKYQ 239
+G ++ LI E+ TCY G + G GC CPAC LR++G ++ K K Q
Sbjct: 174 KLG---VLELIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKYLKSKNQ 219
>gi|224539122|ref|ZP_03679661.1| hypothetical protein BACCELL_04024 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519263|gb|EEF88368.1| hypothetical protein BACCELL_04024 [Bacteroides cellulosilyticus
DSM 14838]
Length = 219
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 138/232 (59%), Gaps = 28/232 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA F RV LSF YGQ+++ E+E R RK VE
Sbjct: 6 ALVVFSGGQDSTTCLFWAKREFKRVVALSFLYGQKHEKEVELAREIARKADVEF------ 59
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +G + H+SLT + Q+ + PNTFVPGRN+ FL AA A
Sbjct: 60 -----EAMDVSFIGKLGHNSLTDTTMLMDQEKPAGSYPNTFVPGRNLFFLSIAAVYAREH 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA +
Sbjct: 115 GINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWGLADE 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G +++LI E+ TCY G + G GC CPAC LR++G EKY
Sbjct: 175 LG---VLDLIRNETLTCYNGIQ------GDGCGHCPACKLRREGL----EKY 213
>gi|145554190|gb|ABP68893.1| unknown [Bacillus sp. PL-12]
Length = 218
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 25/234 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ F VE ++FDY QR + E++C K I
Sbjct: 2 KNEKAVVVFSGGQDSTTCLFWAMKEFKEVEAVTFDYNQRXRTEIQCA----KDIAS---- 53
Query: 67 WKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATL 122
LG + H+L +++L ++ ++LT++ ++++D LP+TFVPGRN++FL FA L
Sbjct: 54 ---GLGVKHHVLDMSLLNQLAPNALTRS-DIEVKDGEEGELPSTFVPGRNLLFLSFAGVL 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++ +IV GVCETD+SGYPDCR I+++ +NL ++ + +HTPLMWL K +TWK
Sbjct: 110 ASQVNAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSIDQNFVIHTPLMWLNKAQTWK 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA ++ D + + + TCY G GC CPAC LR+KG E+ E
Sbjct: 170 LADEL---DAFEFVRKRTLTCYNGI------IADGCGICPACKLRKKGLDEYLE 214
>gi|319901674|ref|YP_004161402.1| preQ(0) biosynthesis protein QueC [Bacteroides helcogenes P 36-108]
gi|319416705|gb|ADV43816.1| preQ(0) biosynthesis protein QueC [Bacteroides helcogenes P 36-108]
Length = 221
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 144/235 (61%), Gaps = 28/235 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRK 58
MN + K A AL++FSGGQDS+TCL WA F +V LSF YGQ+++ VEL + R
Sbjct: 1 MNKVNKDA--ALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHQKEVELAREIAHRA 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQD--NNLPNTFVPGRNIIF 115
K+ E ++ ++ +G + H+SLT N+AM + + PNTFVPGRN+ F
Sbjct: 59 KV------------EFEVMDVSFIGKLGHNSLTDMNMAMDQEKPKDGFPNTFVPGRNLFF 106
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
L AA A GI++IV GV +TD+SGYPDCR ++++ +NL M+ +HTPLMW+
Sbjct: 107 LSVAAVYARERGISHIVTGVSQTDFSGYPDCRDVFVKSLNVTLNLAMDEQFVLHTPLMWI 166
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
K ETW LA ++G +++L+ E+ TCY G + G GC CPAC LR++G
Sbjct: 167 DKAETWALADELG---VLDLVRHETLTCYNGVQ------GDGCGHCPACKLRKEG 212
>gi|332884798|gb|EGK05054.1| 7-cyano-7-deazaguanine synthase [Dysgonomonas mossii DSM 22836]
Length = 218
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 137/228 (60%), Gaps = 21/228 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K SAL+LFSGGQDS+TCL WAL+ F V TL F YGQR+ E+E V K I E
Sbjct: 1 MNKKESALVLFSGGQDSTTCLYWALENFSSVRTLCFTYGQRHSKEVE----VAKSIAE-- 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATL 122
+ +L +I+ +S +SLT ++ M + ++ PNTFVPGRN++FL FAA +
Sbjct: 55 ----KANVPFQLLDASIISQLSVNSLTSDIVMDQEKPADSYPNTFVPGRNLLFLTFAAVI 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI +IV GV E DYSGYPDCR I + +INL M+ H +HTPLMW K W+
Sbjct: 111 ARSHGIRHIVTGVSEADYSGYPDCRDTFILSANASINLAMDEHFQIHTPLMWRDKTAVWQ 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
LA ++G + ++I ++ TCY G GC CP+C LR++G
Sbjct: 171 LADELG---VFDIIRTQTLTCYNGI------IADGCGHCPSCKLRKQG 209
>gi|168180210|ref|ZP_02614874.1| ExsB protein [Clostridium botulinum NCTC 2916]
gi|182669149|gb|EDT81125.1| ExsB protein [Clostridium botulinum NCTC 2916]
Length = 216
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 139/230 (60%), Gaps = 26/230 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C +C + I
Sbjct: 6 AIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYNI-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A +
Sbjct: 58 ----EHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAKQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 114 KGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMAY 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D+G D+V EE+ TCY G + GC CPAC LR+KG+ EF+
Sbjct: 174 DLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYWEFE 214
>gi|187779779|ref|ZP_02996252.1| hypothetical protein CLOSPO_03375 [Clostridium sporogenes ATCC
15579]
gi|187773404|gb|EDU37206.1| hypothetical protein CLOSPO_03375 [Clostridium sporogenes ATCC
15579]
Length = 219
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 141/233 (60%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+ELE +C + I
Sbjct: 6 AIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELEFAKDICKKHNI-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E IL L +L ++ +SLT+ V +PN+FV GRN++FL F A A +
Sbjct: 58 ----EHKILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAKQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 114 RGINAIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEILTPLMWINKAETWKMAY 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF+++Y
Sbjct: 174 DLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKEY 217
>gi|172058908|ref|YP_001815368.1| exsB protein [Exiguobacterium sibiricum 255-15]
gi|254764347|sp|B1YFM6|QUEC_EXIS2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|171991429|gb|ACB62351.1| exsB protein [Exiguobacterium sibiricum 255-15]
Length = 218
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 140/234 (59%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K AL++FSGGQDS+TCL AL + VE ++F+YGQR+ EL+ R+ EL K
Sbjct: 2 KNERALVVFSGGQDSTTCLFQALADYSEVEVVTFNYGQRHAAELDV---AREITSELGVK 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNV-AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H L L++L ++ +SLT + ++ ++ LP+TFV GRN +FL FAA LA
Sbjct: 59 H-------HELDLSLLSQLTSNSLTDHSQSITTNEDGLPSTFVDGRNHLFLSFAAVLAKG 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW LA
Sbjct: 112 RGIRHIITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKKETWALAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G D V + + TCY G G GC CPAC LR+KG + E+ Q
Sbjct: 172 SLGAFDFVR---KRTLTCYNGI------IGDGCGDCPACELRKKGLDAYIEEVQ 216
>gi|167747131|ref|ZP_02419258.1| hypothetical protein ANACAC_01844 [Anaerostipes caccae DSM 14662]
gi|167654091|gb|EDR98220.1| hypothetical protein ANACAC_01844 [Anaerostipes caccae DSM 14662]
Length = 219
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 141/231 (61%), Gaps = 26/231 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVE 62
+ K A+++FSGGQDS+TCL WA +++ V LSFDYGQ++ EL C +C + +
Sbjct: 1 MSKPTKAVVVFSGGQDSTTCLFWAKKKYEEVIALSFDYGQKHSDELICAKEICKKYGV-- 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E HIL +A+L ++ +SLT+ V + + PN+FV GRN++FL FA
Sbjct: 59 ----------EHHILDMALLNQLAPNSLTRADIEVDKEAPETGTPNSFVDGRNMLFLTFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K E
Sbjct: 109 AVFAKQRDIHVLVTGVSQSDFSGYPDCRHVFITSLETTLTLAMDYEFEVITPLMWIDKKE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
TWK+A D+G + ++I +E+ TCY G R G GC CPAC LR++G
Sbjct: 169 TWKMADDLG---VFDVIRQETLTCYNGVR------GDGCGDCPACRLRRRG 210
>gi|153808596|ref|ZP_01961264.1| hypothetical protein BACCAC_02894 [Bacteroides caccae ATCC 43185]
gi|149128918|gb|EDM20135.1| hypothetical protein BACCAC_02894 [Bacteroides caccae ATCC 43185]
Length = 221
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 142/235 (60%), Gaps = 25/235 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
SAL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 7 SALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHEKEVELAREIARKAEVEF----- 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT + Q+ ++ PNTFVPGRN+ FL AA A
Sbjct: 62 ------DVMDVSFIGSLGHNSLTDTSMVMDQEKPADSFPNTFVPGRNLFFLSIAAVYARE 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +++ GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 116 RGINHLITGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALAD 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEKYQ 239
++G ++++I E+ TCY G G GC CPAC LR++G ++ K K Q
Sbjct: 176 ELG---VLDVIRHETLTCYNGIP------GDGCGHCPACTLRREGLEKYLKSKNQ 221
>gi|161869451|ref|YP_001598618.1| aluminum resistance protein, putative [Neisseria meningitidis
053442]
gi|189038928|sp|A9M1Y9|QUEC_NEIM0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|161595004|gb|ABX72664.1| aluminum resistance protein, putative [Neisseria meningitidis
053442]
Length = 220
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 143/232 (61%), Gaps = 26/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELE------------RARWI 53
Query: 68 KDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG + +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGIKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D + E++HTCY G G GC CP+C LR++G E+ E
Sbjct: 174 EMGALDYIR---EQTHTCYNGI------VGGGCRECPSCILRERGLAEYLES 216
>gi|332968838|gb|EGK07885.1| transcription regulator ExsB [Kingella kingae ATCC 23330]
Length = 226
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 143/227 (62%), Gaps = 25/227 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++FSGGQDS+TCL A+ ++ D V+ ++F YGQR+ +EL+ + E+ +
Sbjct: 8 LVIFSGGQDSTTCLIQAIAQYGKDHVQAMTFAYGQRHAIELQ-------RATEIAQE--- 57
Query: 70 SLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG +L L+++G I+H++L + A ++ QDN LPNTFV GRN +FL++AA A
Sbjct: 58 -LGIAQTVLDLSLVGSITHNALMDSQARIQTQDNGLPNTFVDGRNALFLLYAAIYAKSQQ 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +IVIGVCETD+SGYPDCR I +++ + L M+ +HTPLM+L K +TW LA ++
Sbjct: 117 IHDIVIGVCETDFSGYPDCRQVFIDSMQQTLQLAMDYEFRLHTPLMYLTKKQTWALADEL 176
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G D V +HTCY+G GC+ CP+C LR++G E+
Sbjct: 177 GALDFVR---TRTHTCYMGVDG-------GCHECPSCVLRERGLQEY 213
>gi|288575467|ref|ZP_05977006.2| ExsB protein [Neisseria mucosa ATCC 25996]
gi|288567702|gb|EFC89262.1| ExsB protein [Neisseria mucosa ATCC 25996]
Length = 255
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 142/234 (60%), Gaps = 27/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +
Sbjct: 40 PQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELE------------RAR 87
Query: 67 W--KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W +D + +L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA A
Sbjct: 88 WIAQDLGVKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 147
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 148 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 207
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A +G D + E++HTCY G GC+ CP+C LR++G E+ E
Sbjct: 208 ADKMGALDYIR---EQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLES 251
>gi|70727185|ref|YP_254101.1| hypothetical protein SH2186 [Staphylococcus haemolyticus JCSC1435]
gi|110816266|sp|Q4L4D0|QUEC_STAHJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|68447911|dbj|BAE05495.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 223
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 144/227 (63%), Gaps = 20/227 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V +I K+
Sbjct: 11 AIVVFSGGQDSTTCLFYAKKHFKDVELVTFNYGQRHDAEIE----VATRIA------KEQ 60
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ HIL +++L ++ ++LT+ ++ ++ ++ +PNTFVP RN++FL FA LAY+
Sbjct: 61 NLKHHILDMSLLSQLTPNALTQHDMDIETGEDGIPNTFVPARNLLFLSFAGALAYQRNAK 120
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +TW+L+ ++G
Sbjct: 121 HIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQTWELSDELG- 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+++ I + TCY G G GC CPAC LRQ+G + E
Sbjct: 180 --VLDYIRHNTLTCYNGV------IGDGCGECPACQLRQRGLQHYLE 218
>gi|73663317|ref|YP_302098.1| hypothetical protein SSP2008 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|110816267|sp|Q49VQ7|QUEC_STAS1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|72495832|dbj|BAE19153.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 223
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 140/222 (63%), Gaps = 22/222 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA F+ VE ++F YGQR+ E+E V K+I D
Sbjct: 11 AIVVFSGGQDSTTCLFWAKKHFESVELVTFAYGQRHDTEIE----VAKQIA-------DE 59
Query: 71 LG-EDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
G + H+L +++L ++ ++LT+ ++ +++ D+ +PNTFVP RN++FL FA LAY+
Sbjct: 60 QGVKHHLLDMSLLSQLTPNALTQHDLDIEVGDDGIPNTFVPARNLLFLSFAGALAYQTNA 119
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I+ GVCETD+SGYPDCR ++++ ++L M+ +HTPLMWL K TW L+ D+G
Sbjct: 120 KHIITGVCETDFSGYPDCRDSFVKSMNVTLSLSMDKDFVIHTPLMWLDKKATWALSDDLG 179
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+++ I + TCY G G GC CPAC LR G
Sbjct: 180 ---VLDYIRYNTLTCYNGV------IGDGCGECPACQLRANG 212
>gi|304413821|ref|ZP_07395238.1| putative aluminum resistance protein [Candidatus Regiella
insecticola LSR1]
gi|304283541|gb|EFL91936.1| putative aluminum resistance protein [Candidatus Regiella
insecticola LSR1]
Length = 244
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 24/241 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+++FSGGQDS+TCL AL ++++V ++FDY QR++ E+E V KK+V+ + +
Sbjct: 4 SAVVVFSGGQDSTTCLIQALQQYEKVHCITFDYQQRHREEIE----VAKKLVKTLNTART 59
Query: 70 SLGE--DHILPLAILGDISHSSLTKN---------VAMKIQDNNLPNTFVPGRNIIFLVF 118
IL + +L +++ SSLT+N +PNTFVPGRNI+FL
Sbjct: 60 EKNSIVHKILDVTLLNELTISSLTQNHIPIPPYTDANKHTNKKAIPNTFVPGRNILFLTL 119
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA AY++ T ++ GVCETD+SGYPDCR D ++++ AINLG++ + TPLMWL K
Sbjct: 120 AAIYAYKINTTTVITGVCETDFSGYPDCRDDFVKSLNQAINLGIDRSIDFITPLMWLNKA 179
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
E W LA + LI + TCY G G GC C AC+LR +G + ++
Sbjct: 180 EIWALADHYQQ---LKLIRSSTLTCYQG------NIGDGCKQCAACHLRSQGLIYYQANK 230
Query: 239 Q 239
Q
Sbjct: 231 Q 231
>gi|160891982|ref|ZP_02072985.1| hypothetical protein BACUNI_04441 [Bacteroides uniformis ATCC 8492]
gi|270296365|ref|ZP_06202565.1| exsB protein [Bacteroides sp. D20]
gi|317480437|ref|ZP_07939533.1| ExsB protein [Bacteroides sp. 4_1_36]
gi|156858460|gb|EDO51891.1| hypothetical protein BACUNI_04441 [Bacteroides uniformis ATCC 8492]
gi|270273769|gb|EFA19631.1| exsB protein [Bacteroides sp. D20]
gi|316903384|gb|EFV25242.1| ExsB protein [Bacteroides sp. 4_1_36]
Length = 218
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 139/230 (60%), Gaps = 26/230 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E++ R RK VE
Sbjct: 5 TALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHQKEVDLARAIARKAGVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAY 124
++ ++ +G + H+SLT + M++ ++ PNTFVPGRN+ FL AA A
Sbjct: 60 ------EVMDVSFIGRLGHNSLT-DAGMEMDQEKPADSFPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G ++ LI E+ TCY G G GC CPAC LR++G +F
Sbjct: 173 DELG---VLELIRHETLTCYNGIP------GDGCGHCPACTLRREGLEKF 213
>gi|75759341|ref|ZP_00739438.1| Queuosine biosynthesis protein QueC [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493173|gb|EAO56292.1| Queuosine biosynthesis protein QueC [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 224
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 146/227 (64%), Gaps = 23/227 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K+
Sbjct: 5 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAKIAKE------- 57
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 ----LGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAK 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIE-TAINLGMESHVTVHTPLMWLKKYETWKL 183
++G +IV GVCETD+SGYPDCR ++++ T N+ M+ +HTPLMW+ K ETWKL
Sbjct: 114 QVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTFXNISMDYPFVIHTPLMWIDKAETWKL 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ ++G + V E++ CY G G GC CPAC LR+ G
Sbjct: 174 SDELGAFEFVR---EKTLACYNGI------IGDGCGECPACQLRKAG 211
>gi|294668484|ref|ZP_06733581.1| ExsB protein [Neisseria elongata subsp. glycolytica ATCC 29315]
gi|291309447|gb|EFE50690.1| ExsB protein [Neisseria elongata subsp. glycolytica ATCC 29315]
Length = 219
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 142/232 (61%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+T++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQTITFQYGQRHAVELE------------HARWI 53
Query: 68 KDSLGEDHI-LPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG I L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQIVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIKHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D + E++HTCY G GC+ CP+C LR++G E+ E
Sbjct: 174 EMGALDYIR---EQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLES 215
>gi|314933023|ref|ZP_07840389.1| ExsB protein [Staphylococcus caprae C87]
gi|313654342|gb|EFS18098.1| ExsB protein [Staphylococcus caprae C87]
Length = 223
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 144/227 (63%), Gaps = 20/227 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V +KI +
Sbjct: 11 AIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIE----VARKIA------NEQ 60
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ HIL +++L ++ ++LT+ ++ ++ ++ +PNTFVP RN++FL FA LAY++
Sbjct: 61 NLKHHILDMSLLSQLTPNALTQHDLEIEENEDGIPNTFVPARNLLFLSFAGALAYQVNAK 120
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +TW+L+ ++G
Sbjct: 121 HIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQTWELSDELG- 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+++ I + TCY G G GC CPAC LR +G + E
Sbjct: 180 --VLDYIRHHTLTCYNGI------IGDGCGECPACKLRARGLHHYLE 218
>gi|261378241|ref|ZP_05982814.1| ExsB protein [Neisseria cinerea ATCC 14685]
gi|269145319|gb|EEZ71737.1| ExsB protein [Neisseria cinerea ATCC 14685]
Length = 219
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 145/233 (62%), Gaps = 27/233 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 5 QALVIFSGGQDSTTCLIQAIQTYRRENVQAITFQYGQRHVVELE------------RARW 52
Query: 68 --KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+D + +L L+++ I+H++L + A++ DN +PNTFV GRN +FL++AA A
Sbjct: 53 IAQDLGVKQTVLDLSLMRQITHNALMDEAAAIETADNGVPNTFVDGRNALFLLYAAIYAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E++HTCY G GC+ CP+C LR++G E+ E
Sbjct: 173 DEMG---VLDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLES 215
>gi|225025884|ref|ZP_03715076.1| hypothetical protein EUBHAL_00112 [Eubacterium hallii DSM 3353]
gi|224956781|gb|EEG37990.1| hypothetical protein EUBHAL_00112 [Eubacterium hallii DSM 3353]
Length = 221
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 145/230 (63%), Gaps = 24/230 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K +A+++FSGGQDS+TCL WAL R+ +V LSFDY Q++ ELEC KKI
Sbjct: 4 LKNKDAAVVVFSGGQDSTTCLFWALKRYKKVIALSFDYHQKHVKELECA----KKIC--- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAA 120
+D E HI+ +++L ++ +SLT+ V +K+ ++ PN+FV GRN++FL +AA
Sbjct: 57 ---RDHEVEHHIMDMSLLNQLAPNSLTR-VDIKVDESAPEEGTPNSFVDGRNLLFLSYAA 112
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + GIT+I+ GV ++D+SGYPDCR I+++ T + L M+ + TPLMWL K ET
Sbjct: 113 VFAKQRGITDIITGVSQSDFSGYPDCRDMFIKSLNTTLCLAMDYQFDIITPLMWLDKKET 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
W LA ++G D++ E+ TCY G G GC CP+C LR+KG
Sbjct: 173 WALADELGAFDIIR---NETLTCYNGI------IGDGCGHCPSCKLRKKG 213
>gi|329962178|ref|ZP_08300185.1| protein ExsB [Bacteroides fluxus YIT 12057]
gi|328530465|gb|EGF57339.1| protein ExsB [Bacteroides fluxus YIT 12057]
Length = 219
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 30/234 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 5 TALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHRQEVELAREIARKAGVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATLAY 124
++ ++ +G + H+SLT + M++ ++ PNTFVPGRN+ FL AA A
Sbjct: 60 ------EVMDVSFIGRLGHNSLT-DAGMEMDREKPADSFPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
++G ++ LI E+ TCY G G GC CPAC LR++G EKY
Sbjct: 173 DELG---VLELIRHETLTCYNGIP------GDGCGHCPACTLRREGL----EKY 213
>gi|310766851|gb|ADP11801.1| queuosine biosynthesis protein QueC [Erwinia sp. Ejp617]
Length = 231
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 141/233 (60%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E +E+ + S
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAE-----------IEVAQQLSTS 52
Query: 71 LG--EDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG +L + +L +++ SSLT++ A + LP+TFVPGRNI+F FA+ AY
Sbjct: 53 LGVRAHKVLDVTMLNELAVSSLTRDNIPVPAYNSAASGLPSTFVPGRNIVFFTFASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ IV G CETD+SGYPDCR + ++A+ AINLGM + + TPLMWL K ETW LA
Sbjct: 113 QIEAEAIVTGACETDFSGYPDCRDEFVKALNQAINLGMARELRIETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D Q + LI ++ TCY G G GC C AC+LR +G E+++
Sbjct: 173 -DYWQQ--LPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216
>gi|226329054|ref|ZP_03804572.1| hypothetical protein PROPEN_02957 [Proteus penneri ATCC 35198]
gi|225202240|gb|EEG84594.1| hypothetical protein PROPEN_02957 [Proteus penneri ATCC 35198]
Length = 247
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 146/224 (65%), Gaps = 23/224 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++FSGGQDS+TCL AL+++D V ++F+YGQR+K E+E V +K+ +L+
Sbjct: 20 VVVFSGGQDSTTCLIQALEKYDEVHCITFNYGQRHKEEIE----VAQKVSQLL-----GA 70
Query: 72 GEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L +++L +++ SSLT+ N+ + + +++++P+TFVPGRNI+FL AA AY++
Sbjct: 71 TAHKVLDVSLLNELAISSLTRDNIPVPDFKESEESDIPSTFVPGRNILFLTLAAIYAYQI 130
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR + ++A+ A+NLG+ + TPLMWL K ETW LA
Sbjct: 131 GAESVITGVCETDFSGYPDCRDEFVKALNHAVNLGIARDIKFITPLMWLDKAETWALADY 190
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D V ++ TCY G + G GC C AC+LRQ+G
Sbjct: 191 YKKLDFVR---HKTLTCYNGIQ------GDGCGECAACHLRQRG 225
>gi|167761944|ref|ZP_02434071.1| hypothetical protein BACSTE_00288 [Bacteroides stercoris ATCC
43183]
gi|167700176|gb|EDS16755.1| hypothetical protein BACSTE_00288 [Bacteroides stercoris ATCC
43183]
Length = 217
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 142/233 (60%), Gaps = 28/233 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 5 AALVVFSGGQDSTTCLFWAKREFRKVYALSFLYGQKHQKEVELAREIARKAEVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT ++ M + +++PNTFVPGRN+ FL AA A
Sbjct: 60 ------EVMDVSFIGKLGHNSLTDPDMVMDREKPADSVPNTFVPGRNLFFLSIAAVYARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 114 KGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
++G +++LI E+ TCY G G GC CPAC LR++G EKY
Sbjct: 174 ELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGL----EKY 213
>gi|238754242|ref|ZP_04615599.1| Queuosine biosynthesis protein queC [Yersinia ruckeri ATCC 29473]
gi|238707489|gb|EEP99849.1| Queuosine biosynthesis protein queC [Yersinia ruckeri ATCC 29473]
Length = 232
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 141/229 (61%), Gaps = 23/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E RK +L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHREEIEV---ARKLTSQLGAKAHK- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + + + N LPNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVGMLNELAVSSLTRDNIPVPVYEENSVNTLPNTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ AINLG+ + TPLMWL K ETW LA
Sbjct: 115 VQAEAVITGVCETDFSGYPDCRDEFVKALNHAINLGIARDIAFITPLMWLDKAETWALA- 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D Q + LI + TCY G + G GC C AC+LR KG +
Sbjct: 174 DYYQQ--LELIRHHTLTCYNGVQ------GDGCGECAACHLRAKGLNNY 214
>gi|259909245|ref|YP_002649601.1| queuosine biosynthesis protein QueC [Erwinia pyrifoliae Ep1/96]
gi|224964867|emb|CAX56389.1| Queuosine biosynthesis protein [Erwinia pyrifoliae Ep1/96]
gi|283479295|emb|CAY75211.1| Queuosine biosynthesis protein queC ) [Erwinia pyrifoliae DSM
12163]
Length = 231
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 141/233 (60%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E +E+ + S
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAE-----------IEVAQQLSTS 52
Query: 71 LG--EDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG +L + +L +++ SSLT++ A + LP+TFVPGRNI+F FA+ AY
Sbjct: 53 LGVRAHKVLDVTMLNELAVSSLTRDNIPVPAYNPAASGLPSTFVPGRNIVFFTFASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ IV G CETD+SGYPDCR + ++A+ AINLGM + + TPLMWL K ETW LA
Sbjct: 113 QIEAEAIVTGACETDFSGYPDCRDEFVKALNQAINLGMARELRIETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D Q + LI ++ TCY G G GC C AC+LR +G E+++
Sbjct: 173 -DYWQQ--LPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216
>gi|161504368|ref|YP_001571480.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|189038940|sp|A9MM16|QUEC_SALAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|160865715|gb|ABX22338.1| hypothetical protein SARI_02479 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 231
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 143/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 4 AVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARSLALKL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 55 VRAHKMLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMWL K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNRAVNLGMAKDIRFETPLMWLDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D G+ +NL+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGK--LNLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|322378796|ref|ZP_08053225.1| ExsB trans-regulatory protein [Helicobacter suis HS1]
gi|322380645|ref|ZP_08054797.1| ExsB transcriptional regulator [Helicobacter suis HS5]
gi|321146967|gb|EFX41715.1| ExsB transcriptional regulator [Helicobacter suis HS5]
gi|321148826|gb|EFX43297.1| ExsB trans-regulatory protein [Helicobacter suis HS1]
Length = 242
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 139/233 (59%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
S +L FSGGQDS+T W+L F++ L FDY QR+ +ELE K +L +K
Sbjct: 17 SCVLCFSGGQDSTTLALWSLSAFEKTYLLGFDYAQRHGIELEQ---ATKIATQLKLPFK- 72
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATLAY 124
IL L L ++S+S+L K IQ + LP +FVP RN +F+ A A+
Sbjct: 73 ------ILSLDFLQELSNSALFKKSPQSIQAPHMKNPQLPASFVPDRNALFVTLAHAYAF 126
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL---GMESHVTVHTPLMWLKKYETW 181
LG + +++G+ E DYSGY DCR + + +++T++NL G +T+ P M++ K + +
Sbjct: 127 NLGASFVLLGISEQDYSGYFDCRQNFLESLQTSLNLGAFGTPEGITLLAPFMFMSKAQEF 186
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LAQ +G ++ ILE++HTCY+G R R+ +GYGC +CPAC LRQKG+ F
Sbjct: 187 ALAQKLG---FLDFILEQTHTCYIGDRSTRHPYGYGCGTCPACLLRQKGYENF 236
>gi|218767647|ref|YP_002342159.1| hypothetical protein NMA0702 [Neisseria meningitidis Z2491]
gi|81543061|sp|Q9JVT8|QUEC_NEIMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|121051655|emb|CAM07958.1| hypothetical protein NMA0702 [Neisseria meningitidis Z2491]
gi|254674036|emb|CBA09820.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|319409903|emb|CBY90228.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
Length = 219
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 142/232 (61%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D + E++HTCY G GC CP+C LR++G E+ E
Sbjct: 174 EMGALDYIR---EQTHTCYNGIVG-------GCRECPSCILRERGLAEYLES 215
>gi|296315121|ref|ZP_06865062.1| ExsB protein [Neisseria polysaccharea ATCC 43768]
gi|296838036|gb|EFH21974.1| ExsB protein [Neisseria polysaccharea ATCC 43768]
Length = 219
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 143/232 (61%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHDVELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDEAAAIETAENGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D + E++HTCY G GC+ CP+C LR++G E+ E
Sbjct: 174 EMGALDYIR---EQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLES 215
>gi|317047182|ref|YP_004114830.1| exsB protein [Pantoea sp. At-9b]
gi|316948799|gb|ADU68274.1| exsB protein [Pantoea sp. At-9b]
Length = 231
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 144/229 (62%), Gaps = 22/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + +K+ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHREEIEVAAELAQKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT+ N+ + D + LP+TFVPGRNI+FL A+ AY++
Sbjct: 60 -----VLDVTLLNELAVSSLTRDNIPVPAYDPDASGLPSTFVPGRNILFLTLASIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR + ++A+ A++LGM H+ TPLMWL K ETW LA D
Sbjct: 115 EAEAVITGVCETDFSGYPDCRDEFVKALNNAVSLGMARHIRFETPLMWLNKAETWALA-D 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
Q + L+ E+ TCY G + G GC C AC+LR +G +++
Sbjct: 174 YWQQ--LPLVRAETLTCYNGIK------GDGCGECAACHLRARGLTDYQ 214
>gi|189467207|ref|ZP_03015992.1| hypothetical protein BACINT_03591 [Bacteroides intestinalis DSM
17393]
gi|189435471|gb|EDV04456.1| hypothetical protein BACINT_03591 [Bacteroides intestinalis DSM
17393]
Length = 218
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 143/231 (61%), Gaps = 26/231 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL WA +F V LSF YGQ+++ E+E + ++I +D+
Sbjct: 6 ALVVFSGGQDSTTCLFWAKRKFREVVALSFLYGQKHEKEVE----LAREIA------RDA 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ ++ +G + H+SLT N + Q+ ++ PNTFVPGRN+ FL AA A G
Sbjct: 56 DVKFEVMDVSFIGKLGHNSLTDNTMVMDQEKPTDSFPNTFVPGRNLFFLSIAAVYAREHG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA ++
Sbjct: 116 INHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALADEL 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
G +++LI ++ TCY G G GC CPAC LR++G EKY
Sbjct: 176 G---VLDLIRNKTLTCYNGIP------GDGCGHCPACKLRREGL----EKY 213
>gi|15676432|ref|NP_273570.1| putative aluminum resistance protein [Neisseria meningitidis MC58]
gi|81784948|sp|Q9K0Q9|QUEC_NEIMB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|7225750|gb|AAF40955.1| putative aluminum resistance protein [Neisseria meningitidis MC58]
gi|316985378|gb|EFV64326.1| queuosine biosynthesis protein queC [Neisseria meningitidis H44/76]
gi|325139740|gb|EGC62274.1| exsB protein [Neisseria meningitidis CU385]
gi|325200787|gb|ADY96242.1| exsB protein [Neisseria meningitidis H44/76]
Length = 219
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 144/232 (62%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E++HTCY G GC CP+C LR++G E+ E
Sbjct: 174 EMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLES 215
>gi|304388253|ref|ZP_07370373.1| transcription regulator ExsB [Neisseria meningitidis ATCC 13091]
gi|304337780|gb|EFM03929.1| transcription regulator ExsB [Neisseria meningitidis ATCC 13091]
gi|325141743|gb|EGC64196.1| exsB protein [Neisseria meningitidis 961-5945]
gi|325197737|gb|ADY93193.1| exsB protein [Neisseria meningitidis G2136]
Length = 219
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 144/232 (62%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E++HTCY G GC CP+C LR++G E+ E
Sbjct: 174 EMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLES 215
>gi|329955670|ref|ZP_08296578.1| protein ExsB [Bacteroides clarus YIT 12056]
gi|328526073|gb|EGF53097.1| protein ExsB [Bacteroides clarus YIT 12056]
Length = 226
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 139/229 (60%), Gaps = 24/229 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E R RK VE
Sbjct: 5 AALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHRKEVELAREIARKAEVEF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + H+SLT + ++ + +PNTFVPGRN+ FL AA A
Sbjct: 60 ------EVMDVSFIGRLGHNSLTDPGMVMDKEKPADGVPNTFVPGRNLFFLSIAAVYARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 114 KGIDHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDGQFVLHTPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G +++LI E+ TCY G G GC CPAC LR++G ++
Sbjct: 174 ELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGLEKY 213
>gi|293397470|ref|ZP_06641722.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
gi|291420049|gb|EFE93326.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
Length = 236
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 146/241 (60%), Gaps = 26/241 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SA+++FSGGQDS+TCL AL +D V L+FDYGQR+ E+ KI E + K
Sbjct: 2 KNKSAVVVFSGGQDSTTCLVKALAEYDSVHCLTFDYGQRHSEEI--------KIAEQIAK 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAAT 121
K ++ IL + I+ +++ SSLT+N K +P+TFVPGRNI+FL AA
Sbjct: 54 -KLNVSSHKILDVNIINELAISSLTRNEIEVPEHKKTGSEGIPSTFVPGRNIVFLTLAAI 112
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A+++ +++ GVCETD+SGYPDCR ++A+ A+ LG+ + TPLM L K ETW
Sbjct: 113 YAFQVNAEDVITGVCETDFSGYPDCRDVFVKALNNAVTLGIGKDIRFVTPLMSLNKAETW 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF---KEKY 238
LA ++G + LI +++ TCY G + +GC C AC+LR +G+ E+ KE+
Sbjct: 173 ALADNMG---YLELIRDDTLTCYNGVK------SFGCGKCDACFLRLRGFNEYMHDKEET 223
Query: 239 Q 239
Q
Sbjct: 224 Q 224
>gi|325203616|gb|ADY99069.1| exsB protein [Neisseria meningitidis M01-240355]
Length = 219
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 142/231 (61%), Gaps = 27/231 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G D + E++HTCY G GC CP+C LR++G E+ E
Sbjct: 174 EMGALDYIR---EQTHTCYKGIVG-------GCRECPSCILRERGLAEYLE 214
>gi|291276559|ref|YP_003516331.1| queuosine biosynthesis protein [Helicobacter mustelae 12198]
gi|290963753|emb|CBG39588.1| Putative queuosine biosynthesis protein [Helicobacter mustelae
12198]
Length = 231
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 144/228 (63%), Gaps = 18/228 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++FSGGQDS+T +WA F VE L+FDY Q++++EL+ +KI E K + L
Sbjct: 5 LVVFSGGQDSTTVAAWAKKEFSSVELLAFDYQQKHRIELQ----QARKIAE---KLELKL 57
Query: 72 GEDHILPLAILGDISHSSL----TKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRL 126
+++ L L I+ S+L +N++ K + + +L +FVP RN +FL A A ++
Sbjct: 58 ---NMIVLDFLAQIADSALFAKSIENLSTKHKTHQDLLASFVPNRNGLFLTIAHAFAQKI 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+I IGV E DYSGYPDCR + I A+E+A+N G ++ + +HTPL + K E + LAQ+
Sbjct: 115 HANHIAIGVSEQDYSGYPDCREEFITAMESALNKGAQTQIKIHTPLSHMSKAEEFLLAQN 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G ++ +ILE+SHTCY G R+ R+ WGYGC C AC LR+ + +F
Sbjct: 175 LG---VLEMILEDSHTCYEGVRESRHAWGYGCGICAACILRKNAYEKF 219
>gi|298370142|ref|ZP_06981458.1| ExsB protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281602|gb|EFI23091.1| ExsB protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 219
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 142/232 (61%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D + E++HTCY G GC+ CP+C LR++G E+ E
Sbjct: 174 EMGALDYIR---EQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLES 215
>gi|307129934|ref|YP_003881950.1| enzyme in preQ0 biosynthesis [Dickeya dadantii 3937]
gi|306527463|gb|ADM97393.1| enzyme in preQ0 biosynthesis [Dickeya dadantii 3937]
Length = 231
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 26/234 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E +++ +
Sbjct: 3 SAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAE-----------IDVAAELAQ 51
Query: 70 SLGE--DHILPLAILGDISHSSLTK-NVAMKIQDNN---LPNTFVPGRNIIFLVFAATLA 123
+LG +L + +L +++ SSLT+ N+ + D N LP+TFVPGRNI+FL A+ A
Sbjct: 52 TLGARAHKVLNVGLLNELAVSSLTRDNIPVPEFDANADGLPSTFVPGRNILFLTLASIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW L
Sbjct: 112 YQVGADTVITGVCETDFSGYPDCRDEFVKALNQAITLGLARDIRFVTPLMWLNKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A D V + TCY G + G GC C AC+LR KG E++
Sbjct: 172 ADYYQQLDTVK---NHTLTCYNGIK------GTGCGQCAACHLRAKGLAEYQHN 216
>gi|317498352|ref|ZP_07956648.1| exsB protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894357|gb|EFV16543.1| exsB protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 221
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 139/233 (59%), Gaps = 22/233 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA ++D V LSF+YGQR+ ELEC KKI
Sbjct: 1 MAKPNKAVVVFSGGQDSTTCLFWAKKKYDEVIALSFNYGQRHSKELECA----KKIC--- 53
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K+ E HIL + +L ++ +SLT+ V + + PN+FV GRN++FL FAA
Sbjct: 54 ---KEHGVEHHILDMGLLNQLAPNSLTRVDMEVDHEAPEEGTPNSFVDGRNMLFLTFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K +TW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFISSLETTLTLAMDYEFEVITPLMWIDKKQTW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++A +G D+V E+ TCY G G GC CPAC LR+ G E+
Sbjct: 171 EMADKLGVFDIVR---NETLTCYNGV------MGDGCGECPACKLRRHGLEEY 214
>gi|255008270|ref|ZP_05280396.1| putative aluminum resistance protein [Bacteroides fragilis 3_1_12]
gi|313145991|ref|ZP_07808184.1| queuosine biosynthesis protein queC [Bacteroides fragilis 3_1_12]
gi|313134758|gb|EFR52118.1| queuosine biosynthesis protein queC [Bacteroides fragilis 3_1_12]
Length = 220
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 134/237 (56%), Gaps = 24/237 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVEL 63
+ K SA++LFSGGQDS+TCL WA F +V LSF YGQ++ E+E R + VE
Sbjct: 1 MMKNDSAVVLFSGGQDSTTCLFWAKKHFSKVYALSFLYGQKHAHEVELARGIAERAGVEF 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAA 120
H++ + +G + +SLT +D ++ PNTFVPGRN+ FL AA
Sbjct: 61 -----------HVMDTSFIGSLGSNSLTDTSISMDEDKPEDSFPNTFVPGRNLFFLSIAA 109
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A G ++V GV +TDYSGYPDCR I+++ +NL M+ +HTPLMW+ K ET
Sbjct: 110 VFAREQGAFHLVTGVSQTDYSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAET 169
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
W LA ++G DLV E+ TCY G GC CPAC LR++G E+ K
Sbjct: 170 WALADELGVFDLVR---NETLTCYNGIPAD------GCGHCPACKLRKQGLEEYLSK 217
>gi|82775647|ref|YP_401994.1| queuosine biosynthesis protein QueC [Shigella dysenteriae Sd197]
gi|309787039|ref|ZP_07681651.1| queuosine biosynthesis protein queC [Shigella dysenteriae 1617]
gi|110816260|sp|Q32JK2|QUEC_SHIDS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81239795|gb|ABB60505.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308924617|gb|EFP70112.1| queuosine biosynthesis protein queC [Shigella dysenteriae 1617]
Length = 231
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 141/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM H+ TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKHIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|167768060|ref|ZP_02440113.1| hypothetical protein CLOSS21_02604 [Clostridium sp. SS2/1]
gi|167710389|gb|EDS20968.1| hypothetical protein CLOSS21_02604 [Clostridium sp. SS2/1]
Length = 221
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 139/233 (59%), Gaps = 22/233 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA ++D V LSF+YGQR+ ELEC KKI
Sbjct: 1 MAKPNKAVVVFSGGQDSTTCLFWAKKKYDEVIALSFNYGQRHSKELECA----KKIC--- 53
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K+ E HIL + +L ++ +SLT+ V + + PN+FV GRN++FL FAA
Sbjct: 54 ---KEHGVEHHILDMGLLNQLAPNSLTRVDMEVDHEAPEEGTPNSFVDGRNMLFLTFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K +TW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFISSLETTLTLAMDYEFEVITPLMWIDKKQTW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++A +G D+V E+ TCY G G GC CPAC LR+ G E+
Sbjct: 171 EMADKLGVFDIVK---NETLTCYNGV------MGDGCGECPACKLRRHGLEEY 214
>gi|238897963|ref|YP_002923643.1| queuosine biosynthesis protein, ExsB domain protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465721|gb|ACQ67495.1| queuosine biosynthesis protein, ExsB domain protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 236
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 146/233 (62%), Gaps = 25/233 (10%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N+ IK+A +L+FSGGQDS+TCL AL ++D V ++FDY QR++ E+ + KK+
Sbjct: 4 NNPIKRA---VLVFSGGQDSTTCLIQALHQYDEVHCITFDYAQRHRSEIAIAQALAKKLQ 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNN---LPNTFVPGRNIIFLV 117
K IL L +L +++ SSLT+ N+ + + N+ LPNTFVPGRNI+FL
Sbjct: 61 ATSYK---------ILDLQLLNELTVSSLTRENIPLPKKQNSEGSLPNTFVPGRNIVFLT 111
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
F+A AY+L ++ GVCETD+SGYPDCR + ++++ A+ LGM+ ++T TPLMWL K
Sbjct: 112 FSAIYAYQLDADVVITGVCETDFSGYPDCRDEFVKSLNHAVTLGMQKNITFVTPLMWLNK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
ETW LA D Q + LI ++ TCY G + G GC C +C LR KG
Sbjct: 172 AETWALA-DYYQQ--MPLIRNKTLTCYNGIQ------GDGCGECLSCELRLKG 215
>gi|310640610|ref|YP_003945368.1| atpase, confers aluminum resistance [Paenibacillus polymyxa SC2]
gi|309245560|gb|ADO55127.1| Putative ATPase, confers aluminum resistance [Paenibacillus
polymyxa SC2]
Length = 227
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 141/225 (62%), Gaps = 20/225 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA F VET++FDYGQR+K E+E + ++ +P+
Sbjct: 7 AVVVFSGGQDSTTCLFWAKKHFAEVETVTFDYGQRHKQEIEVAAGIASELG--VPQ---- 60
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA + G
Sbjct: 61 ----TVLDMSLLNQLAPNALTRTDIDITQEEGELPSTFVDGRNLLFLSFAAVLAKQKGAR 116
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW++A ++
Sbjct: 117 HIITGVCETDFSGYPDCRDSFIKSLNVTLNLSMDYPFVIHTPLMWLNKAETWQMADELKA 176
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ V + TCY G G GC CPAC LR+ G ++
Sbjct: 177 FEFVR---TRTLTCYNGI------IGDGCGECPACNLRRAGLEQY 212
>gi|294789668|ref|ZP_06754901.1| ExsB protein [Simonsiella muelleri ATCC 29453]
gi|294482380|gb|EFG30074.1| ExsB protein [Simonsiella muelleri ATCC 29453]
Length = 218
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 136/228 (59%), Gaps = 26/228 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A++ F V+ ++F YGQR+ +ELE +W
Sbjct: 7 ALVIFSGGQDSTTCLFQAINEFGVGNVQAITFTYGQRHAIELE------------RAQWI 54
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+D + +L L+++G I+H++L N A +LPNTFV GRN +FL++AA A
Sbjct: 55 AQDLRVKQTVLDLSLIGSITHNALMDNTAAIDTSGSLPNTFVDGRNALFLLYAAIYAKSQ 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I I +GVCETD+SGYPDCR ++++ +NL M + TPLM+L K ETW LA
Sbjct: 115 NIHTIFVGVCETDFSGYPDCRDVFVKSMNVTLNLAMAYDFDIRTPLMYLTKKETWALADQ 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D V E +HTCYLG + GC+ CP+C LR++G E+
Sbjct: 175 MGVLDYVR---EHTHTCYLGVPN-------GCHECPSCVLRERGLSEY 212
>gi|325129660|gb|EGC52475.1| exsB protein [Neisseria meningitidis OX99.30304]
gi|325135885|gb|EGC58497.1| exsB protein [Neisseria meningitidis M0579]
gi|325202686|gb|ADY98140.1| exsB protein [Neisseria meningitidis M01-240149]
gi|325207568|gb|ADZ03020.1| exsB protein [Neisseria meningitidis NZ-05/33]
Length = 219
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 141/232 (60%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELE------------RARWI 53
Query: 68 KDSLG-EDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG + +L L+++ I+H++L + A++ N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGIKQTVLDLSLMRQITHNALMDDTAAIETAGNGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D + E++HTCY G GC CP+C LR++G E+ E
Sbjct: 174 EMGALDYIR---EQTHTCYNGIVG-------GCRECPSCILRERGLAEYLES 215
>gi|240013446|ref|ZP_04720359.1| YbaX [Neisseria gonorrhoeae DGI18]
gi|240080025|ref|ZP_04724568.1| YbaX [Neisseria gonorrhoeae FA19]
gi|240112235|ref|ZP_04726725.1| YbaX [Neisseria gonorrhoeae MS11]
gi|240114978|ref|ZP_04729040.1| YbaX [Neisseria gonorrhoeae PID18]
gi|240120517|ref|ZP_04733479.1| YbaX [Neisseria gonorrhoeae PID24-1]
gi|240125011|ref|ZP_04737897.1| YbaX [Neisseria gonorrhoeae SK-92-679]
gi|240127524|ref|ZP_04740185.1| YbaX [Neisseria gonorrhoeae SK-93-1035]
gi|260441207|ref|ZP_05795023.1| YbaX [Neisseria gonorrhoeae DGI2]
gi|268596169|ref|ZP_06130336.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae FA19]
gi|268598293|ref|ZP_06132460.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae MS11]
gi|268600646|ref|ZP_06134813.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID18]
gi|268683597|ref|ZP_06150459.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
SK-92-679]
gi|268685900|ref|ZP_06152762.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
SK-93-1035]
gi|291044541|ref|ZP_06570250.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|268549957|gb|EEZ44976.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae FA19]
gi|268582424|gb|EEZ47100.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae MS11]
gi|268584777|gb|EEZ49453.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID18]
gi|268623881|gb|EEZ56281.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
SK-92-679]
gi|268626184|gb|EEZ58584.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
SK-93-1035]
gi|291011435|gb|EFE03431.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 219
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 143/232 (61%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELE------------RAEWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ DN +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNALFLLYAAIFAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E++HTCY G GC CP+C LR++G E E
Sbjct: 174 EMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLES 215
>gi|121634320|ref|YP_974565.1| hypothetical protein NMC0464 [Neisseria meningitidis FAM18]
gi|167016439|sp|A1KSD4|QUEC_NEIMF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|120866026|emb|CAM09764.1| hypothetical protein NMC0464 [Neisseria meningitidis FAM18]
gi|254669985|emb|CBA04680.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
gi|308388708|gb|ADO31028.1| putative aluminum resistance protein [Neisseria meningitidis
alpha710]
gi|325127641|gb|EGC50557.1| exsB protein [Neisseria meningitidis N1568]
gi|325131675|gb|EGC54380.1| exsB protein [Neisseria meningitidis M6190]
gi|325137691|gb|EGC60268.1| exsB protein [Neisseria meningitidis ES14902]
Length = 219
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 144/232 (62%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E++HTCY G GC CP+C LR++G E+ E
Sbjct: 174 EMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLES 215
>gi|60680908|ref|YP_211052.1| putative ExsB family protein [Bacteroides fragilis NCTC 9343]
gi|253563256|ref|ZP_04840713.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_2_5]
gi|265762860|ref|ZP_06091428.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_16]
gi|81316024|sp|Q5LFI6|QUEC_BACFN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816210|sp|Q64WB0|QUEC_BACFR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|60492342|emb|CAH07108.1| putative ExsB family protein [Bacteroides fragilis NCTC 9343]
gi|251947032|gb|EES87314.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_2_5]
gi|263255468|gb|EEZ26814.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_16]
gi|301162471|emb|CBW22017.1| putative ExsB family protein [Bacteroides fragilis 638R]
Length = 219
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 133/235 (56%), Gaps = 24/235 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMP 65
K SA++LFSGGQDS+TCL WA F +V LSF YGQ++ E+E R + VE
Sbjct: 2 KNDSAVVLFSGGQDSTTCLFWAKKHFKKVYALSFLYGQKHAHEVELARGIAERAGVEF-- 59
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATL 122
H++ + +G + +SLT +D ++ PNTFVPGRN+ FL AA
Sbjct: 60 ---------HVMDTSFIGSLGSNSLTDTSISMDEDKPKDSFPNTFVPGRNLFFLSIAAVF 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G ++V GV +TDYSGYPDCR I+++ +NL M+ +HTPLMW+ K ETW
Sbjct: 111 AREQGAFHLVTGVSQTDYSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA ++G DLV E+ TCY G GC CPAC LR++G E+ K
Sbjct: 171 LADELGVFDLVR---NETLTCYNGIPAD------GCGHCPACKLRKQGLEEYLSK 216
>gi|291561059|emb|CBL39859.1| preQ(0) biosynthesis protein QueC [butyrate-producing bacterium
SSC/2]
Length = 221
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 139/233 (59%), Gaps = 22/233 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA ++D V LSF+YGQR+ ELEC KKI
Sbjct: 1 MAKPNKAVVVFSGGQDSTTCLFWAKKKYDEVIALSFNYGQRHSKELECA----KKIC--- 53
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K+ E HIL + +L ++ +SLT+ V + + PN+FV GRN++FL FAA
Sbjct: 54 ---KEHGVEHHILDMGLLNQLAPNSLTRVDMEVDHEAPEEGTPNSFVDGRNMLFLTFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K +TW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFISSLETTLTLAMDYEFEVITPLMWIDKKQTW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++A +G D+V E+ TCY G G GC CPAC LR+ G E+
Sbjct: 171 EMADKLGVFDIVK---NETLTCYNGV------MGDGCGECPACKLRRHGLEEY 214
>gi|53712758|ref|YP_098750.1| putative aluminum resistance protein [Bacteroides fragilis YCH46]
gi|52215623|dbj|BAD48216.1| putative aluminum resistance protein [Bacteroides fragilis YCH46]
Length = 220
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 134/237 (56%), Gaps = 24/237 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVEL 63
+ K SA++LFSGGQDS+TCL WA F +V LSF YGQ++ E+E R + VE
Sbjct: 1 MMKNDSAVVLFSGGQDSTTCLFWAKKHFKKVYALSFLYGQKHAHEVELARGIAERAGVEF 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAA 120
H++ + +G + +SLT +D ++ PNTFVPGRN+ FL AA
Sbjct: 61 -----------HVMDTSFIGSLGSNSLTDTSISMDEDKPKDSFPNTFVPGRNLFFLSIAA 109
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A G ++V GV +TDYSGYPDCR I+++ +NL M+ +HTPLMW+ K ET
Sbjct: 110 VFAREQGAFHLVTGVSQTDYSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAET 169
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
W LA ++G DLV E+ TCY G GC CPAC LR++G E+ K
Sbjct: 170 WALADELGVFDLVR---NETLTCYNGIPAD------GCGHCPACKLRKQGLEEYLSK 217
>gi|194097759|ref|YP_002000800.1| YbaX [Neisseria gonorrhoeae NCCP11945]
gi|239998262|ref|ZP_04718186.1| YbaX [Neisseria gonorrhoeae 35/02]
gi|240122816|ref|ZP_04735772.1| YbaX [Neisseria gonorrhoeae PID332]
gi|268594117|ref|ZP_06128284.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 35/02]
gi|268681430|ref|ZP_06148292.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID332]
gi|293397674|ref|ZP_06641880.1| exsB protein [Neisseria gonorrhoeae F62]
gi|254764362|sp|B4RQ61|QUEC_NEIG2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|193933049|gb|ACF28873.1| YbaX [Neisseria gonorrhoeae NCCP11945]
gi|268547506|gb|EEZ42924.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 35/02]
gi|268621714|gb|EEZ54114.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID332]
gi|291611620|gb|EFF40689.1| exsB protein [Neisseria gonorrhoeae F62]
gi|317163544|gb|ADV07085.1| YbaX [Neisseria gonorrhoeae TCDC-NG08107]
Length = 219
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 142/232 (61%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELE------------RAEWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D +L L+++ I+H++L + A++ DN +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVSQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNALFLLYAAIFAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E++HTCY G GC CP+C LR++G E E
Sbjct: 174 EMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLES 215
>gi|322834039|ref|YP_004214066.1| exsB protein [Rahnella sp. Y9602]
gi|321169240|gb|ADW74939.1| exsB protein [Rahnella sp. Y9602]
Length = 232
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 142/231 (61%), Gaps = 23/231 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E +K VEL +
Sbjct: 4 AVVVFSGGQDSTTCLIQALKQYDEVHCVTFDYGQRHRAEIEI---AQKLSVELGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNN--LPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ V +NN LP+TFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVGLLNELAVSSLTRDNIPVPNFGDENNGGLPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ TA++LG+ V TPLMWL K ETW LA
Sbjct: 115 IQAEAVITGVCETDFSGYPDCRDEFVKALNTAVSLGLARDVRFETPLMWLNKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
DLV ++ TCY G G GC C AC+LR G ++++
Sbjct: 175 YYQQLDLVR---HKTLTCYNGIA------GDGCGECAACHLRANGLQQYQQ 216
>gi|261393104|emb|CAX50701.1| conserved hypothetical protein [Neisseria meningitidis 8013]
gi|325133665|gb|EGC56322.1| exsB protein [Neisseria meningitidis M13399]
gi|325143847|gb|EGC66162.1| exsB protein [Neisseria meningitidis M01-240013]
gi|325206623|gb|ADZ02076.1| exsB protein [Neisseria meningitidis M04-240196]
Length = 219
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 141/232 (60%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELE------------RASWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D + E++HTCY G GC CP+C LR++G E+ E
Sbjct: 174 EMGALDYIR---EQTHTCYNGIVG-------GCRECPSCILRERGLAEYLES 215
>gi|225076556|ref|ZP_03719755.1| hypothetical protein NEIFLAOT_01604 [Neisseria flavescens
NRL30031/H210]
gi|224952056|gb|EEG33265.1| hypothetical protein NEIFLAOT_01604 [Neisseria flavescens
NRL30031/H210]
Length = 219
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 141/232 (60%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ +ELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAIELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A ++ + LPNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQRVLDLSLMQQITHNALMDDTASIETASDGLPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D I E +HTCY G GC+ CP+C LR++G E+ E
Sbjct: 174 EMGALD---YICEHTHTCYNGVVG-------GCHECPSCILRERGLSEYLES 215
>gi|197284034|ref|YP_002149906.1| queuosine biosynthesis protein QueC [Proteus mirabilis HI4320]
gi|227358095|ref|ZP_03842437.1| transcriptional regulator [Proteus mirabilis ATCC 29906]
gi|254764367|sp|B4EU60|QUEC_PROMH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194681521|emb|CAR40410.1| conserved hypothetical protein [Proteus mirabilis HI4320]
gi|227161830|gb|EEI46862.1| transcriptional regulator [Proteus mirabilis ATCC 29906]
Length = 232
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 145/224 (64%), Gaps = 23/224 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++FSGGQDS+TCL AL+++D V ++F+YGQR+K E+E V +++ +L+
Sbjct: 5 VVVFSGGQDSTTCLIQALEQYDEVHCITFNYGQRHKEEIE----VAQRVSQLLGATAHK- 59
Query: 72 GEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L +++L +++ SSLT+ N+ + + + +++P+TFVPGRNI+FL AA AY++
Sbjct: 60 ----VLDVSLLNELAISSLTRDNIPVPDFKQSEQSDIPSTFVPGRNILFLTLAAIYAYQI 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR + ++A+ A+NLG+ + TPLMWL K +TW LA
Sbjct: 116 GAESVITGVCETDFSGYPDCRDEFVKALNHAVNLGIARDIQFITPLMWLDKAQTWALADY 175
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
G D V + TCY G + G GC C AC+LR++G
Sbjct: 176 YGKLDFVR---HNTLTCYNGIQ------GDGCGQCAACHLRERG 210
>gi|312171581|emb|CBX79839.1| Queuosine biosynthesis protein queC ) [Erwinia amylovora ATCC
BAA-2158]
Length = 231
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 141/233 (60%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E +++ + S
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAE-----------IDVARQLSTS 52
Query: 71 LG--EDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG +L + +L +++ SSLT++ A + LP+TFVPGRNI+F FA+ AY
Sbjct: 53 LGVRAHKVLDVTMLNELAVSSLTRDNIPVPAYNPAASGLPSTFVPGRNIVFFTFASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ IV G CETD+SGYPDCR++ + A+ AINLGM + + TPLMWL K ETW LA
Sbjct: 113 QIEAQAIVTGACETDFSGYPDCRNEFVNALNQAINLGMARELRIETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D Q + LI ++ TCY G G GC C AC+LR +G E+++
Sbjct: 173 -DYWHQ--LPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216
>gi|308067861|ref|YP_003869466.1| hypothetical protein PPE_01080 [Paenibacillus polymyxa E681]
gi|305857140|gb|ADM68928.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 227
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 140/225 (62%), Gaps = 20/225 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA F VET++FDYGQR+K E+E + +++ +P+
Sbjct: 7 AVVVFSGGQDSTTCLFWAKKHFAEVETVTFDYGQRHKQEIEVAAGIARELG--VPQ---- 60
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+L +++L ++ ++LT+ ++ + Q+ LP+TFV GRN++FL FA LA + G
Sbjct: 61 ----TVLDMSLLNQLAPNALTRTDIDITQQEGELPSTFVDGRNLLFLSFAGVLAKQKGAR 116
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW +A ++
Sbjct: 117 HLITGVCETDFSGYPDCRDSFIKSLNVTLNLSMDYPFVIHTPLMWLNKAETWHMADELKA 176
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ V + TCY G G GC CPAC LR+ G ++
Sbjct: 177 FEFVR---TRTLTCYNGV------IGDGCGECPACKLRRAGLEQY 212
>gi|218130072|ref|ZP_03458876.1| hypothetical protein BACEGG_01658 [Bacteroides eggerthii DSM 20697]
gi|317476564|ref|ZP_07935811.1| exsB protein [Bacteroides eggerthii 1_2_48FAA]
gi|217987792|gb|EEC54119.1| hypothetical protein BACEGG_01658 [Bacteroides eggerthii DSM 20697]
gi|316907307|gb|EFV29014.1| exsB protein [Bacteroides eggerthii 1_2_48FAA]
Length = 231
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 140/234 (59%), Gaps = 30/234 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E++ R RK VE
Sbjct: 18 AALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHRKEVDLAREIARKAGVEF----- 72
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAY 124
++ ++++G + +SLT + M + + ++ PNTFVPGRN+ FL AA A
Sbjct: 73 ------EVMDVSLIGKLGRNSLT-DTGMAMDEEKPADSFPNTFVPGRNLFFLSIAAVYAR 125
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ HTPLMW+ K ETW LA
Sbjct: 126 EKGINHIVTGVSQTDFSGYPDCRDTFIKSLNVTLNLAMDGQFVFHTPLMWIDKAETWALA 185
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
++G +++LI E+ TCY G G GC CPAC LR++G EKY
Sbjct: 186 DELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGL----EKY 226
>gi|168261107|ref|ZP_02683080.1| ExsB protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|205350003|gb|EDZ36634.1| ExsB protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 231
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 142/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAVYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|183601069|ref|ZP_02962562.1| hypothetical protein PROSTU_04692 [Providencia stuartii ATCC 25827]
gi|188019409|gb|EDU57449.1| hypothetical protein PROSTU_04692 [Providencia stuartii ATCC 25827]
Length = 232
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 143/237 (60%), Gaps = 30/237 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E +E+ K S
Sbjct: 4 AVVVFSGGQDSTTCLIQALKMYDEVHCVTFDYGQRHRLE-----------IEVAQKLSHS 52
Query: 71 LGE--DHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG IL + +L +++ SSLT+ N+ + + N LP+TFVPGRNI+FL AA A
Sbjct: 53 LGAAAHKILDVNLLNELAVSSLTRDNIPVPDYNESATNGLPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ A+NLG+ + TPLMWL K +TW L
Sbjct: 113 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGLAKDIRFETPLMWLDKAQTWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEK 237
A G + I E++ TCY G + G GC C AC+LR KG ++ KE
Sbjct: 173 ADYYGH---LETIREQTLTCYNGIQ------GDGCGECAACHLRSKGLNYYLSHKES 220
>gi|254883022|ref|ZP_05255732.1| queuosine biosynthesis protein queC [Bacteroides sp. 4_3_47FAA]
gi|319641866|ref|ZP_07996543.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_1_40A]
gi|254835815|gb|EET16124.1| queuosine biosynthesis protein queC [Bacteroides sp. 4_3_47FAA]
gi|317386539|gb|EFV67441.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_1_40A]
Length = 223
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 137/230 (59%), Gaps = 24/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E R+ K VE
Sbjct: 6 ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARVIAGKAGVEFKA---- 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +G++ +SLT + ++ PNTFVPGRN+ FL AA A L
Sbjct: 62 -------MDVSFIGNLGKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAVYAREL 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA +
Sbjct: 115 GINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWINKAETWALADE 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G +++LI E+ TCY G + G GC CPAC LR++G ++ E
Sbjct: 175 LG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215
>gi|189462596|ref|ZP_03011381.1| hypothetical protein BACCOP_03286 [Bacteroides coprocola DSM 17136]
gi|189430757|gb|EDU99741.1| hypothetical protein BACCOP_03286 [Bacteroides coprocola DSM 17136]
Length = 219
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 136/229 (59%), Gaps = 24/229 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E R RK V+
Sbjct: 5 AALVVFSGGQDSTTCLFWAKKHFKKVYALSFLYGQKHVKEVELAREIARKAEVDF----- 59
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ ++ +G + +SLT ++ M + + PNTFVPGRN+ FL AA A
Sbjct: 60 ------HVMDVSFIGHLGKNSLTDTSIHMDEEKPEGTFPNTFVPGRNLFFLSIAAVYARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +IV GV +TD+SGYPDCR I+++ +NL ME +HTPLMW+ K +TW LA
Sbjct: 114 RGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMEEQFVIHTPLMWIDKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G DLV E+ TCY G G GC CPAC LR++G ++
Sbjct: 174 ELGVLDLVR---NETLTCYNGIP------GDGCGHCPACKLRREGLEKY 213
>gi|150004784|ref|YP_001299528.1| putative aluminum resistance protein [Bacteroides vulgatus ATCC
8482]
gi|189038897|sp|A6L2J2|QUEC_BACV8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|149933208|gb|ABR39906.1| putative aluminum resistance protein [Bacteroides vulgatus ATCC
8482]
Length = 223
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 137/230 (59%), Gaps = 24/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E R+ K VE
Sbjct: 6 ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARVIAGKAGVEFKA---- 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +G++ +SLT + ++ PNTFVPGRN+ FL AA A L
Sbjct: 62 -------MDVSFIGNLGKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAVYAREL 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA +
Sbjct: 115 GINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALADE 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G +++LI E+ TCY G + G GC CPAC LR++G ++ E
Sbjct: 175 LG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215
>gi|300721983|ref|YP_003711263.1| putative (aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Xenorhabdus nematophila ATCC
19061]
gi|297628480|emb|CBJ89045.1| putative (aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Xenorhabdus nematophila ATCC
19061]
Length = 232
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 142/234 (60%), Gaps = 23/234 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K++ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALRQYDEVHCVTFDYGQRHRAEIDVASRISKELGAAAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + + ++LPNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLNELAISSLTRDNIPVPDFNASEKSDLPNTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + +RA+ A++LG+ + TPLMWL K ETW LA
Sbjct: 115 VEAEAVITGVCETDFSGYPDCRDEFVRALNKAVSLGIARDIRFETPLMWLNKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D I ++ TCY G + G GC+ C AC+LR KG + + Q
Sbjct: 175 YYKKLD---FIRNQTLTCYNGIQ------GDGCSECAACHLRAKGLTNYLDNSQ 219
>gi|254804409|ref|YP_003082630.1| putative aluminum resistance protein [Neisseria meningitidis
alpha14]
gi|254667951|emb|CBA04189.1| putative aluminum resistance protein [Neisseria meningitidis
alpha14]
Length = 219
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 143/232 (61%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELE------------RASWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E++HTCY G GC CP+C LR++G E+ E
Sbjct: 174 EMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLES 215
>gi|242372945|ref|ZP_04818519.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis M23864:W1]
gi|242349429|gb|EES41030.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis M23864:W1]
Length = 223
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 142/225 (63%), Gaps = 20/225 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E V KKI +
Sbjct: 11 AIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIE----VAKKIA------NEQ 60
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ HIL +++L ++ ++LT+ ++ ++ ++ +PNTFVP RN++FL FA LAY++
Sbjct: 61 GLKHHILDMSLLSQLTPNALTQHDLDIEENEDGIPNTFVPARNLLFLSFAGALAYQINAK 120
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I+ GVCETD+SGYPDCR I+++ ++L M +HTPLMWL K +TW+L+ ++G
Sbjct: 121 HIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMGKDFVIHTPLMWLDKAQTWELSDELG- 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+++ I + TCY G G GC CPAC LR +G +
Sbjct: 180 --VLDYIRYNTLTCYNGI------IGDGCGECPACKLRARGLHHY 216
>gi|291326893|ref|ZP_06126250.2| ExsB protein [Providencia rettgeri DSM 1131]
gi|291312421|gb|EFE52874.1| ExsB protein [Providencia rettgeri DSM 1131]
Length = 237
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 142/231 (61%), Gaps = 27/231 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E +E+ K S
Sbjct: 12 AVVVFSGGQDSTTCLIQALQNYDEVHCVTFDYGQRHRFE-----------IEVAQKLSVS 60
Query: 71 LGE--DHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG +L + +L +++ SSLT+ N+ + + + + LP+TFVPGRNI+FL AA A
Sbjct: 61 LGAAAHKVLDVTLLNELAISSLTRDNIPVPDFAESESSALPSTFVPGRNILFLTLAAIYA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ A++LG+ ++ TPLMWL K +TW L
Sbjct: 121 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVDLGLAKNIRFETPLMWLNKAQTWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A G + I +++ TCY G + G GC C AC+LR KG E+
Sbjct: 181 ADSYGH---LETIRQQTLTCYNGIQ------GDGCGECAACHLRSKGLNEY 222
>gi|16759435|ref|NP_455052.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16763836|ref|NP_459451.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29142793|ref|NP_806135.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|167990440|ref|ZP_02571540.1| ExsB protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168231444|ref|ZP_02656502.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194472229|ref|ZP_03078213.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197247660|ref|YP_002145436.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262901|ref|ZP_03162975.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198243409|ref|YP_002214409.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200391103|ref|ZP_03217714.1| ExsB protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|207855935|ref|YP_002242586.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213027386|ref|ZP_03341833.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
gi|213160787|ref|ZP_03346497.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213425849|ref|ZP_03358599.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213586412|ref|ZP_03368238.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213612961|ref|ZP_03370787.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213645998|ref|ZP_03376051.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850131|ref|ZP_03381029.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289829268|ref|ZP_06546880.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|81416443|sp|Q7CR22|QUEC_SALTY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81499330|sp|Q8XEU3|QUEC_SALTI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764374|sp|B5EXJ5|QUEC_SALA4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764375|sp|B5FKW0|QUEC_SALDC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764376|sp|B5QU45|QUEC_SALEP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|25325301|pir||AB0559 conserved hypothetical protein ybaX [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16418962|gb|AAL19410.1| putative (aluminum) resistance protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16501726|emb|CAD08914.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138425|gb|AAO69995.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194458593|gb|EDX47432.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197211363|gb|ACH48760.1| ExsB protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197241156|gb|EDY23776.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197937925|gb|ACH75258.1| ExsB protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199603548|gb|EDZ02094.1| ExsB protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205330946|gb|EDZ17710.1| ExsB protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333976|gb|EDZ20740.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|206707738|emb|CAR32023.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261245738|emb|CBG23535.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992172|gb|ACY87057.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157066|emb|CBW16550.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911488|dbj|BAJ35462.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226033|gb|EFX51084.1| Queuosine Biosynthesis QueC ATPase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323128775|gb|ADX16205.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|326622158|gb|EGE28503.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|332987404|gb|AEF06387.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 231
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 142/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|168818932|ref|ZP_02830932.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205343967|gb|EDZ30731.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320084729|emb|CBY94520.1| Queuosine biosynthesis protein queC [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 231
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 142/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|204930537|ref|ZP_03221467.1| ExsB protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204320471|gb|EDZ05674.1| ExsB protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 231
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 142/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + PLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFEMPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR KG +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRAKGLNHY 213
>gi|168240285|ref|ZP_02665217.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194447743|ref|YP_002044490.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205351765|ref|YP_002225566.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|254764377|sp|B5R6V6|QUEC_SALG2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764378|sp|B4T9F0|QUEC_SALHS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194406047|gb|ACF66266.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205271546|emb|CAR36365.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205340377|gb|EDZ27141.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|326626800|gb|EGE33143.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 231
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 142/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGTRAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|271499603|ref|YP_003332628.1| exsB protein [Dickeya dadantii Ech586]
gi|270343158|gb|ACZ75923.1| exsB protein [Dickeya dadantii Ech586]
Length = 231
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 141/233 (60%), Gaps = 26/233 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E +++ +
Sbjct: 3 SAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAE-----------IDVAAELAH 51
Query: 70 SLGE--DHILPLAILGDISHSSLTK-NVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
+LG +L + +L +++ SSLT+ N+ + D + LP+TFVPGRNI+FL A+ A
Sbjct: 52 TLGARAHKVLNVNLLNELAVSSLTRDNIPVPEFDATVDGLPSTFVPGRNILFLTLASIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G ++ GVCETD+SGYPDCR + ++A+ A+ LG+ + TPLMWL K ETW L
Sbjct: 112 YQVGAETVITGVCETDFSGYPDCRDEFVKALNQAVALGLAKDIRFITPLMWLNKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A D V + TCY G + G GC C AC+LR KG E+++
Sbjct: 172 ADYYQQLDTVQ---NHTLTCYNGIK------GTGCGQCAACHLRAKGLAEYRQ 215
>gi|237730421|ref|ZP_04560902.1| queuosine biosynthesis protein QueC [Citrobacter sp. 30_2]
gi|226905960|gb|EEH91878.1| queuosine biosynthesis protein QueC [Citrobacter sp. 30_2]
Length = 231
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 139/229 (60%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ AL ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D N +PNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLSELAVSSLTRD-NIPVPDYEPDANGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VQAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV EE+ TCY G + G GC C AC LR G +
Sbjct: 174 YWGKLDLVR---EETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|198276947|ref|ZP_03209478.1| hypothetical protein BACPLE_03152 [Bacteroides plebeius DSM 17135]
gi|198270472|gb|EDY94742.1| hypothetical protein BACPLE_03152 [Bacteroides plebeius DSM 17135]
Length = 221
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 139/234 (59%), Gaps = 24/234 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA F++V LSF YGQ+++ E+E R RK VE
Sbjct: 7 ALVVFSGGQDSTTCLFWAKKHFEKVYALSFLYGQKHEKEVELAREIARKAGVEF------ 60
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRL 126
++ ++ +G + +SLT ++ ++ PNTFVPGRN+ FL AA A
Sbjct: 61 -----EVMDVSFIGHLGKNSLTDTSIHMDEEKPKDSFPNTFVPGRNLFFLSIAAVYAREK 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI ++V GV +TD+SGYPDCR I+++ +NL ME +HTPLMW+ K +TW LA +
Sbjct: 116 GIHHMVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMEEQFVIHTPLMWIDKAQTWALADE 175
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G +++L+ E+ TCY G G GC CPAC LR++G ++ Q+
Sbjct: 176 LG---VLDLVRNETLTCYNGIP------GDGCGHCPACKLRREGLEKYLASKQN 220
>gi|292487476|ref|YP_003530348.1| queuosine biosynthesis protein QueC [Erwinia amylovora CFBP1430]
gi|292898718|ref|YP_003538087.1| hypothetical protein EAM_0999 [Erwinia amylovora ATCC 49946]
gi|291198566|emb|CBJ45674.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
gi|291552895|emb|CBA19940.1| Queuosine biosynthesis protein queC ) [Erwinia amylovora CFBP1430]
Length = 231
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 143/231 (61%), Gaps = 22/231 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ V +++ L+
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEID----VARQLSTLL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ +L + +L +++ SSLT++ A + LP+TFVPGRN++F FA+ AY++
Sbjct: 55 VRAHKVLDVTMLNELAVSSLTRDNIPVPAYNPAASGLPSTFVPGRNLVFFTFASIYAYQI 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
IV G CETD+SGYPDCR++ + A+ AINLGM + + TPLMWL K ETW LA D
Sbjct: 115 EAQAIVTGACETDFSGYPDCRNEFVNALNQAINLGMARELRIETPLMWLNKAETWALA-D 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
Q + LI ++ TCY G G GC C AC+LR +G E+++
Sbjct: 174 YWHQ--LPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216
>gi|312962951|ref|ZP_07777437.1| queuosine biosynthesis protein [Pseudomonas fluorescens WH6]
gi|311282720|gb|EFQ61315.1| queuosine biosynthesis protein [Pseudomonas fluorescens WH6]
Length = 232
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 140/232 (60%), Gaps = 26/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+ E VE+ K
Sbjct: 5 AVMVFSGGQDSTTCLIQALALYDEVHCITFDYGQRHVAE-----------VEVAQKLARQ 53
Query: 71 LGED--HILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG ++ +++L +++ SSLT++ + ++LP+TFVPGRNI+FL AA AY
Sbjct: 54 LGATVHKVMDVSLLNELAISSLTRDNIPVPTVNSSGDSLPSTFVPGRNILFLTLAAIYAY 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+ LGME V + TPLMWL K ETW LA
Sbjct: 114 QVKAETVITGVCETDFSGYPDCRDEFVKALNQALKLGMEYDVRLDTPLMWLNKAETWALA 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
D + L+ + + TCY G G GC +C AC LR +G ++++
Sbjct: 174 D---YHDALELVRDSTLTCYNGI------IGSGCGNCDACNLRARGLSDYQQ 216
>gi|168237570|ref|ZP_02662628.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735041|ref|YP_002113486.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|254764382|sp|B4TMD3|QUEC_SALSV RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194710543|gb|ACF89764.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289471|gb|EDY28834.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 231
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 141/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ + L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LELVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|255065046|ref|ZP_05316901.1| ExsB protein [Neisseria sicca ATCC 29256]
gi|255050467|gb|EET45931.1| ExsB protein [Neisseria sicca ATCC 29256]
Length = 219
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 143/235 (60%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCY---LGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D + E++HTCY +G GC+ CP+C LR++G E+ E
Sbjct: 174 EMGALDYIR---EQTHTCYNSIVG----------GCHECPSCVLRERGLAEYLES 215
>gi|323965131|gb|EGB60590.1| exsB protein [Escherichia coli M863]
gi|327254772|gb|EGE66388.1| queuosine biosynthesis protein queC [Escherichia coli STEC_7v]
Length = 231
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDSSTCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSSTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRSNGLHHY 213
>gi|322614733|gb|EFY11662.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618839|gb|EFY15727.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623546|gb|EFY20385.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629155|gb|EFY25934.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631876|gb|EFY28630.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637387|gb|EFY34089.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642072|gb|EFY38682.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647891|gb|EFY44366.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652366|gb|EFY48721.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653269|gb|EFY49602.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660582|gb|EFY56818.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664734|gb|EFY60927.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669213|gb|EFY65363.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670758|gb|EFY66891.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322679003|gb|EFY75058.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682032|gb|EFY78057.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685139|gb|EFY81136.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192967|gb|EFZ78190.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196951|gb|EFZ82093.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203936|gb|EFZ88953.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206979|gb|EFZ91932.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323214182|gb|EFZ98940.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214494|gb|EFZ99245.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323219164|gb|EGA03661.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323227000|gb|EGA11181.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230182|gb|EGA14302.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233920|gb|EGA18009.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238386|gb|EGA22444.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244073|gb|EGA28082.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246234|gb|EGA30217.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251860|gb|EGA35723.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257856|gb|EGA41535.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261130|gb|EGA44722.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264940|gb|EGA48439.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272503|gb|EGA55910.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 231
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 143/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ R ++L +
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDV---ARALALQLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|224582293|ref|YP_002636091.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|110816258|sp|Q57SA8|QUEC_SALCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764380|sp|C0Q7Y0|QUEC_SALPC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|224466820|gb|ACN44650.1| hypothetical protein SPC_0469 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 231
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 144/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|59800588|ref|YP_207300.1| YbaX [Neisseria gonorrhoeae FA 1090]
gi|75356427|sp|Q5FA99|QUEC_NEIG1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|59717483|gb|AAW88888.1| putative aluminum resistance protein [Neisseria gonorrhoeae FA
1090]
Length = 224
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 142/237 (59%), Gaps = 32/237 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELE------------RAEWI 53
Query: 68 KDSLGEDH-ILPLAILGDISHSSL------TKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
LG +L L+++ I+H++L + A++ DN +PNTFV GRN +FL++AA
Sbjct: 54 AQDLGVSQTVLDLSLMRQITHNALMDETAAIETAAIETADNGVPNTFVDGRNALFLLYAA 113
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +T
Sbjct: 114 IFAKGQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQT 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
W LA ++G +++ I E++HTCY G GC CP+C LR++G E E
Sbjct: 174 WALADEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLES 220
>gi|168465550|ref|ZP_02699432.1| ExsB protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195631864|gb|EDX50384.1| ExsB protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
Length = 231
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 141/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D +PNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYEPNAGGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|212694007|ref|ZP_03302135.1| hypothetical protein BACDOR_03532 [Bacteroides dorei DSM 17855]
gi|237710328|ref|ZP_04540809.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237723866|ref|ZP_04554347.1| queuosine biosynthesis protein queC [Bacteroides sp. D4]
gi|294778361|ref|ZP_06743784.1| protein ExsB [Bacteroides vulgatus PC510]
gi|212663539|gb|EEB24113.1| hypothetical protein BACDOR_03532 [Bacteroides dorei DSM 17855]
gi|229437692|gb|EEO47769.1| queuosine biosynthesis protein queC [Bacteroides dorei 5_1_36/D4]
gi|229455790|gb|EEO61511.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|294447623|gb|EFG16200.1| protein ExsB [Bacteroides vulgatus PC510]
Length = 223
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 136/230 (59%), Gaps = 24/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E R K VE
Sbjct: 6 ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARAIAGKAGVEFKA---- 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +G++ +SLT + ++ PNTFVPGRN+ FL AA A L
Sbjct: 62 -------MDVSFIGNLGKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAVYAREL 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA +
Sbjct: 115 GINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALADE 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G +++LI E+ TCY G + G GC CPAC LR++G ++ E
Sbjct: 175 LG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215
>gi|333030899|ref|ZP_08458960.1| exsB protein [Bacteroides coprosuis DSM 18011]
gi|332741496|gb|EGJ71978.1| exsB protein [Bacteroides coprosuis DSM 18011]
Length = 217
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 132/229 (57%), Gaps = 21/229 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMP 65
+ A++LFSGGQDS+TCL WA RFD+V +SFDYGQ++ E++ R ++ VE +
Sbjct: 2 RNSKAIVLFSGGQDSTTCLYWAKKRFDKVYAISFDYGQKHSNEVDVARSIAQQANVEFI- 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +S ++LT ++NN PNTFVPGRN+ FL AA A+
Sbjct: 61 ----------VLDAHYISQLSINALTDTSLEMDENNNCPNTFVPGRNLFFLSMAAVFAFE 110
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ +IV GV +TD+SGYPDCRH+ I++ +NL M+ +H PLMWL K W+L+
Sbjct: 111 HDVQHIVTGVSQTDFSGYPDCRHNFIQSANLTLNLAMDKEFILHAPLMWLDKAGVWELSD 170
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G DLV + + TCY G GC CPAC LR +G E+
Sbjct: 171 KLGVFDLVK---DHTLTCYNGV------IAEGCGHCPACKLRNQGLQEY 210
>gi|157369345|ref|YP_001477334.1| queuosine biosynthesis protein QueC [Serratia proteamaculans 568]
gi|167016451|sp|A8GAR6|QUEC_SERP5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157321109|gb|ABV40206.1| exsB protein [Serratia proteamaculans 568]
Length = 232
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 142/230 (61%), Gaps = 23/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E ++ V L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALKQYDEVHCVTFDYGQRHRAEIEV---AQELSVALGAK---- 56
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + Q N LP+TFVPGRNI+FL AA AY+
Sbjct: 57 --AHKLLDVGLLNELAISSLTRDNIPVPAYDSTQSNGLPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW LA
Sbjct: 115 VEAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALA- 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D Q + L+ +++ TCY G + G GC C AC+LR G +++
Sbjct: 174 DYYHQ--LELVQQDTLTCYNGIK------GNGCGECAACHLRANGLQQYQ 215
>gi|265751135|ref|ZP_06087198.1| exsB protein [Bacteroides sp. 3_1_33FAA]
gi|263238031|gb|EEZ23481.1| exsB protein [Bacteroides sp. 3_1_33FAA]
Length = 223
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 136/230 (59%), Gaps = 24/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E R K VE
Sbjct: 6 ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARAIAGKAGVEFKA---- 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +G++ +SLT + ++ PNTFVPGRN+ FL AA A L
Sbjct: 62 -------MDVSFIGNLDKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAVYAREL 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA +
Sbjct: 115 GINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALADE 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G +++LI E+ TCY G + G GC CPAC LR++G ++ E
Sbjct: 175 LG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215
>gi|218693907|ref|YP_002401574.1| queuosine biosynthesis protein QueC [Escherichia coli 55989]
gi|254764336|sp|B7L681|QUEC_ECO55 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218350639|emb|CAU96331.1| queuosine biosynthesis protein [Escherichia coli 55989]
Length = 231
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 141/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L + +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAR-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|261380021|ref|ZP_05984594.1| ExsB protein [Neisseria subflava NJ9703]
gi|284797228|gb|EFC52575.1| ExsB protein [Neisseria subflava NJ9703]
Length = 219
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 143/229 (62%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ +ELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAIELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + V+++ + LPNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMQQITHNALMDDTVSIETASDGLPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G +++ I E +HTCY G GC+ CP+C LR++G E+
Sbjct: 174 EMG---VLDYIREHTHTCYNGVVG-------GCHECPSCILRERGLSEY 212
>gi|188534625|ref|YP_001908422.1| queuosine biosynthesis protein QueC [Erwinia tasmaniensis Et1/99]
gi|254764345|sp|B2VIU4|QUEC_ERWT9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|188029667|emb|CAO97546.1| Queuosine biosynthesis protein [Erwinia tasmaniensis Et1/99]
Length = 231
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 144/233 (61%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+++D V ++FDYGQR++ E +++ + S
Sbjct: 4 AVVVFSGGQDSTTCLIQALEQYDEVHCVTFDYGQRHRAE-----------IDVAQQLSAS 52
Query: 71 LG--EDHILPLAILGDISHSSLTK-NVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAY 124
LG +L + +L +++ SSLT+ N+ + D + LP+TFVPGRNI+F FA+ A+
Sbjct: 53 LGVRAHKVLDVTMLNELAASSLTRDNIPVPAYDPSASGLPSTFVPGRNIVFFTFASIYAF 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ I+ G CETD+SGYPDCR + ++A+ A+NLGM + + TPLMWL K ETW LA
Sbjct: 113 QIEAEAIITGACETDFSGYPDCRDEFVKALNRAVNLGMARELRIETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D Q + LI ++ TCY G G GC C AC+LR +G ++++
Sbjct: 173 -DYWQQ--LPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLDQYQQN 216
>gi|332828637|gb|EGK01333.1| 7-cyano-7-deazaguanine synthase [Dysgonomonas gadei ATCC BAA-286]
Length = 221
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 131/227 (57%), Gaps = 22/227 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
KK P AL+LFSGGQDS+TCL WA++ F V TL F YGQR+ E+E +
Sbjct: 3 KKEP-ALVLFSGGQDSTTCLYWAIENFSSVRTLCFTYGQRHSKEVEVAQSIAGHAGVPF- 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLA 123
+L +I+ +S +SLT ++ M + ++ PNTFVPGRN++FL FAA +A
Sbjct: 61 ---------QLLDASIISQLSVNSLTSDIVMDQEKPADSYPNTFVPGRNLLFLTFAAVIA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +IV GV E DYSGYPDCR I + +INL M+ H +HTPLMW K W+L
Sbjct: 112 RSHGIRHIVTGVSEADYSGYPDCRDTFILSANASINLAMDEHFQIHTPLMWRDKTAVWQL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
A +G D+V ++ TCY G GC CPAC LR++G
Sbjct: 172 ADQLGVFDVVR---TQTLTCYNGIIAD------GCGHCPACKLRKQG 209
>gi|294635330|ref|ZP_06713827.1| ExsB protein [Edwardsiella tarda ATCC 23685]
gi|291091306|gb|EFE23867.1| ExsB protein [Edwardsiella tarda ATCC 23685]
Length = 229
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 140/227 (61%), Gaps = 20/227 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL R+D V ++FDYGQR++ E++ V + + +
Sbjct: 4 AVVVFSGGQDSTTCLIQALQRYDDVHCITFDYGQRHRAEID----VARNLAHQL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L + +L +++ SSLT+ N+ + Q + +PNTFVPGRNI+FL AA AY++
Sbjct: 55 ASAHKVLDVGLLNELAISSLTRDNIPVPTQSETGIPNTFVPGRNILFLTLAAIYAYQVEA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
++ GVCETD+SGYPDCR ++A+ A++LGM + TPLMWL K ETW LA D
Sbjct: 115 EAVITGVCETDFSGYPDCRDAFVKALHHAVSLGMARDIRFETPLMWLNKAETWALA-DYY 173
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
GQ + + ++ TCY G + G GC C AC+LR G +++
Sbjct: 174 GQ--LERVRHDTLTCYNGIQ------GDGCGHCAACHLRAHGLQQYQ 212
>gi|70732354|ref|YP_262110.1| queuosine biosynthesis protein QueC [Pseudomonas fluorescens Pf-5]
gi|110816206|sp|Q4K6M3|QUEC2_PSEF5 RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
gi|68346653|gb|AAY94259.1| exsB protein [Pseudomonas fluorescens Pf-5]
Length = 232
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 148/238 (62%), Gaps = 25/238 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+++FSGGQDS+TCL AL +D V ++FDYGQR+ E+E + K++ + K
Sbjct: 4 TAVIVFSGGQDSTTCLIHALPLYDEVHCITFDYGQRHHAEIETAQRLSKQLGATVHK--- 60
Query: 70 SLGEDHILPLAILGDISHSSLTK-NVAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYR 125
+L ++L +++ SSLT+ N+ + +++ LP+TFVPGRNI+FL A+ AY+
Sbjct: 61 ------VLDASLLNELAISSLTRDNIPVPTVNSSGESLPSTFVPGRNILFLTLASIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+ LGME + + TPLMWL K ETW LA
Sbjct: 115 VKAETVITGVCETDFSGYPDCRDEFVKALNKALELGMEYKLRLETPLMWLNKAETWALA- 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEKYQD 240
D Q + L+ E++ TCY G G GC +C AC LR KG ++E K + D
Sbjct: 174 DYHNQ--LELVREQTLTCYNGI------MGSGCANCDACNLRAKGLNAYLENKTQVMD 223
>gi|319779038|ref|YP_004129951.1| Queuosine Biosynthesis QueC ATPase [Taylorella equigenitalis MCE9]
gi|317109062|gb|ADU91808.1| Queuosine Biosynthesis QueC ATPase [Taylorella equigenitalis MCE9]
Length = 222
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 141/231 (61%), Gaps = 25/231 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ AL++FSGGQDS+TCL A++ F V+ ++F YGQR+++EL KK E+
Sbjct: 2 SEKALVVFSGGQDSTTCLLQAIENFGVGNVKAITFIYGQRHEIEL-------KKAREIAI 54
Query: 66 KWKDSLG-EDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG E IL L+++ I+ ++L K +K ++ LPNTFV GRN +FL+++ A
Sbjct: 55 ----DLGIEQTILDLSVMKSITTNALMQKGAEIKTDESGLPNTFVDGRNALFLLYSCIYA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI NIVIGVCETD+SGYPDCR ++++ ++NL M+ +HTPLMWL K +TW+L
Sbjct: 111 KSQGIKNIVIGVCETDFSGYPDCRDIFVKSMNVSMNLAMDYDFVIHTPLMWLTKAQTWEL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A +G D V +HTCY G GC +CP+C LR +G E+
Sbjct: 171 ADKLGRLDYVR---TRTHTCYEGVEG-------GCGNCPSCVLRNRGLEEY 211
>gi|329296788|ref|ZP_08254124.1| queuosine biosynthesis protein QueC [Plautia stali symbiont]
Length = 231
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 140/231 (60%), Gaps = 26/231 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E + + +
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHREE-----------ISVAAQLAHQ 52
Query: 71 LGE--DHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG +L + +L +++ SSLT++ A Q + LP+TFVPGRNI+FL A+ AY
Sbjct: 53 LGARAHKVLDVTLLNELAVSSLTRDSIPVPAYNPQASGLPSTFVPGRNILFLTLASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM V TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNNAVSLGMAREVRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D Q + L+ E+ TCY G + G GC C AC+LR +G +++
Sbjct: 173 -DYWQQ--LPLVRSETLTCYNGVK------GDGCGECAACHLRARGLADYR 214
>gi|194445512|ref|YP_002039698.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|254764379|sp|B4SWU8|QUEC_SALNS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194404175|gb|ACF64397.1| ExsB protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 231
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 143/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ R ++L +
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDV---ARDLALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|161615349|ref|YP_001589314.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167551728|ref|ZP_02345481.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|238911414|ref|ZP_04655251.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|189038941|sp|A9MWC2|QUEC_SALPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|161364713|gb|ABX68481.1| hypothetical protein SPAB_03120 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205323472|gb|EDZ11311.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 231
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 143/229 (62%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ R ++L +
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDV---ARDLALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|62179067|ref|YP_215484.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62126700|gb|AAX64403.1| putative (aluminum) resistance protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322713528|gb|EFZ05099.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 266
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 143/225 (63%), Gaps = 24/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 39 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 91
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 92 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 148
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 149 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 207
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D GQ ++L+ EE+ TCY G + G GC C AC LR G
Sbjct: 208 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANG 244
>gi|331671990|ref|ZP_08372786.1| ExsB protein [Escherichia coli TA280]
gi|331070979|gb|EGI42338.1| ExsB protein [Escherichia coli TA280]
Length = 231
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 138/228 (60%), Gaps = 22/228 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ K + + +PNTFVPGRNI+FL AA AY++
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRDSIPVPDYKPEADGIPNTFVPGRNILFLTLAAIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 115 KAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALADY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 175 YGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|293408594|ref|ZP_06652433.1| exsB protein [Escherichia coli B354]
gi|291471772|gb|EFF14255.1| exsB protein [Escherichia coli B354]
Length = 231
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 138/228 (60%), Gaps = 22/228 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ K + + +PNTFVPGRNI+FL AA AY++
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRDSIPVPDYKPEADGIPNTFVPGRNILFLTLAAIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 115 KAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALADY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 175 YGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|300918173|ref|ZP_07134780.1| ExsB protein [Escherichia coli MS 115-1]
gi|300414624|gb|EFJ97934.1| ExsB protein [Escherichia coli MS 115-1]
Length = 231
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGMK------GDGCGHCAACNLRTNGLNHY 213
>gi|206577844|ref|YP_002240076.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae 342]
gi|288936827|ref|YP_003440886.1| exsB protein [Klebsiella variicola At-22]
gi|290510117|ref|ZP_06549487.1| exsB protein [Klebsiella sp. 1_1_55]
gi|254764354|sp|B5Y0T5|QUEC_KLEP3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|206566902|gb|ACI08678.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae 342]
gi|288891536|gb|ADC59854.1| exsB protein [Klebsiella variicola At-22]
gi|289776833|gb|EFD84831.1| exsB protein [Klebsiella sp. 1_1_55]
Length = 233
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 141/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+ + K
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D +PNTFVPGRNI+FL A AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-NIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 114 VKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ +E+ TCY G + G GC C AC LR G ++
Sbjct: 173 DFWGQ--LDLVRQETLTCYNGIK------GDGCGQCAACNLRANGLNQY 213
>gi|254493040|ref|ZP_05106211.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 1291]
gi|226512080|gb|EEH61425.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 1291]
Length = 219
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 141/232 (60%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELE------------RAEWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D +L L+++ I+H++L + A++ DN +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVSQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNALFLLYAAIFAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ + TPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIQTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E++HTCY G GC CP+C LR++G E E
Sbjct: 174 EMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLES 215
>gi|170021183|ref|YP_001726137.1| queuosine biosynthesis protein QueC [Escherichia coli ATCC 8739]
gi|194437541|ref|ZP_03069638.1| queuosine biosynthesis protein QueC [Escherichia coli 101-1]
gi|218553011|ref|YP_002385924.1| queuosine biosynthesis protein QueC [Escherichia coli IAI1]
gi|253774565|ref|YP_003037396.1| queuosine biosynthesis protein QueC [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160514|ref|YP_003043622.1| queuosine biosynthesis protein QueC [Escherichia coli B str.
REL606]
gi|297520136|ref|ZP_06938522.1| queuosine biosynthesis protein QueC [Escherichia coli OP50]
gi|300930253|ref|ZP_07145666.1| ExsB protein [Escherichia coli MS 187-1]
gi|189038914|sp|B1J004|QUEC_ECOLC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764340|sp|B7M3T7|QUEC_ECO8A RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169756111|gb|ACA78810.1| exsB protein [Escherichia coli ATCC 8739]
gi|194423710|gb|EDX39700.1| queuosine biosynthesis protein QueC [Escherichia coli 101-1]
gi|218359779|emb|CAQ97320.1| queuosine biosynthesis protein [Escherichia coli IAI1]
gi|242376226|emb|CAQ30917.1| enzyme in preQ[0] biosynthesis [Escherichia coli BL21(DE3)]
gi|253325609|gb|ACT30211.1| exsB protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972415|gb|ACT38086.1| predicted aluminum resistance protein [Escherichia coli B str.
REL606]
gi|253976625|gb|ACT42295.1| predicted aluminum resistance protein [Escherichia coli BL21(DE3)]
gi|300461825|gb|EFK25318.1| ExsB protein [Escherichia coli MS 187-1]
gi|323963434|gb|EGB58996.1| exsB protein [Escherichia coli H489]
gi|323972298|gb|EGB67508.1| exsB protein [Escherichia coli TA007]
Length = 231
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 141/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC+ C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCSHCAACNLRANGLNHY 213
>gi|261822500|ref|YP_003260606.1| queuosine biosynthesis protein QueC [Pectobacterium wasabiae
WPP163]
gi|261606513|gb|ACX88999.1| exsB protein [Pectobacterium wasabiae WPP163]
Length = 231
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 138/229 (60%), Gaps = 22/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E+E + +K+ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQHYDDVHCITFDYGQRHRAEIEVAQELSQKLGATAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
IL + +L +++ SSLT++ + + D N +PNTFVPGRNI+FL A+ AY++
Sbjct: 60 -----ILDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + ++A+ AI LG+ ++ TPLMWL K ETW LA
Sbjct: 115 GAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARNIRFETPLMWLNKAETWALADY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D V + TCY G + G GC C AC+LR G +++
Sbjct: 175 YQQLDTVRY---HTLTCYNGIQ------GDGCGQCAACHLRANGLAQYQ 214
>gi|218549888|ref|YP_002383679.1| queuosine biosynthesis protein QueC [Escherichia fergusonii ATCC
35469]
gi|254764346|sp|B7LMD5|QUEC_ESCF3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218357429|emb|CAQ90068.1| queuosine biosynthesis protein [Escherichia fergusonii ATCC 35469]
gi|323976071|gb|EGB71164.1| exsB protein [Escherichia coli TW10509]
gi|325498265|gb|EGC96124.1| queuosine biosynthesis protein QueC [Escherichia fergusonii ECD227]
Length = 231
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRSNGLHHY 213
>gi|319639271|ref|ZP_07994022.1| queuosine biosynthesis protein queC [Neisseria mucosa C102]
gi|317399455|gb|EFV80125.1| queuosine biosynthesis protein queC [Neisseria mucosa C102]
Length = 219
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 143/232 (61%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ +ELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGLENVQAITFQYGQRHAIELE------------RARWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E +HTCY G GC+ CP+C LR++G E+ E
Sbjct: 174 EMG---VLDYIREHTHTCYNGVVG-------GCHECPSCILRERGLSEYLES 215
>gi|56414389|ref|YP_151464.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197363309|ref|YP_002142946.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|81360136|sp|Q5PFP1|QUEC_SALPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764381|sp|B5BD76|QUEC_SALPK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56128646|gb|AAV78152.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094786|emb|CAR60319.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 231
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 141/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL A AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLVAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|240015885|ref|ZP_04722425.1| YbaX [Neisseria gonorrhoeae FA6140]
gi|240117262|ref|ZP_04731324.1| YbaX [Neisseria gonorrhoeae PID1]
gi|268602958|ref|ZP_06137125.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID1]
gi|268587089|gb|EEZ51765.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID1]
Length = 219
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 142/232 (61%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + R V+ ++F YGQR+ VELE +W
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELE------------RAEWI 53
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L L+++ I+H++L + A++ DN +PNTFV GRN +FL++AA A
Sbjct: 54 AQDLGVKQTVLDLSLMRQITHNALMDDTAAIETADNGVPNTFVDGRNALFLLYAAIFAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ + TPLM+L K +TW LA
Sbjct: 114 QGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIQTPLMYLTKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I E++HTCY G GC CP+C LR++G E E
Sbjct: 174 EMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLES 215
>gi|309700705|emb|CBJ00001.1| queuosine biosynthesis protein [Escherichia coli ETEC H10407]
Length = 231
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRASGLNHY 213
>gi|301022562|ref|ZP_07186434.1| ExsB protein [Escherichia coli MS 69-1]
gi|300397443|gb|EFJ80981.1| ExsB protein [Escherichia coli MS 69-1]
gi|324114671|gb|EGC08639.1| exsB protein [Escherichia fergusonii B253]
Length = 231
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLHHY 213
>gi|157146939|ref|YP_001454258.1| queuosine biosynthesis protein QueC [Citrobacter koseri ATCC
BAA-895]
gi|167016423|sp|A8AK09|QUEC_CITK8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157084144|gb|ABV13822.1| hypothetical protein CKO_02716 [Citrobacter koseri ATCC BAA-895]
Length = 231
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ AL ++D V ++FDYGQR++ E++ R ++L +
Sbjct: 4 AVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDV---ARDLALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVTLLSELAVSSLTRD-NIPVPDYEPDADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+ LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVTLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV EE+ TCY G + G GC C AC LR G +
Sbjct: 174 YWGKLDLVR---EETLTCYNGIK------GDGCGQCAACNLRANGLNHY 213
>gi|300924171|ref|ZP_07140163.1| ExsB protein [Escherichia coli MS 182-1]
gi|301330689|ref|ZP_07223291.1| ExsB protein [Escherichia coli MS 78-1]
gi|300419624|gb|EFK02935.1| ExsB protein [Escherichia coli MS 182-1]
gi|300843350|gb|EFK71110.1| ExsB protein [Escherichia coli MS 78-1]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|26246455|ref|NP_752494.1| queuosine biosynthesis protein QueC [Escherichia coli CFT073]
gi|91209518|ref|YP_539504.1| queuosine biosynthesis protein QueC [Escherichia coli UTI89]
gi|110640705|ref|YP_668433.1| queuosine biosynthesis protein QueC [Escherichia coli 536]
gi|117622704|ref|YP_851617.1| queuosine biosynthesis protein QueC [Escherichia coli APEC O1]
gi|191173679|ref|ZP_03035203.1| queuosine biosynthesis protein QueC [Escherichia coli F11]
gi|194435436|ref|ZP_03067614.1| queuosine biosynthesis protein QueC [Shigella dysenteriae 1012]
gi|218557354|ref|YP_002390267.1| queuosine biosynthesis protein QueC [Escherichia coli S88]
gi|218688308|ref|YP_002396520.1| queuosine biosynthesis protein QueC [Escherichia coli ED1a]
gi|218698644|ref|YP_002406273.1| queuosine biosynthesis protein QueC [Escherichia coli IAI39]
gi|218703728|ref|YP_002411247.1| queuosine biosynthesis protein QueC [Escherichia coli UMN026]
gi|227884545|ref|ZP_04002350.1| transcriptional regulator [Escherichia coli 83972]
gi|237707561|ref|ZP_04538042.1| queuosine biosynthesis protein queC [Escherichia sp. 3_2_53FAA]
gi|293403565|ref|ZP_06647656.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1412]
gi|293413699|ref|ZP_06656348.1| exsB protein [Escherichia coli B185]
gi|298379177|ref|ZP_06989058.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1302]
gi|300900515|ref|ZP_07118682.1| ExsB protein [Escherichia coli MS 198-1]
gi|300987956|ref|ZP_07178472.1| ExsB protein [Escherichia coli MS 45-1]
gi|300997367|ref|ZP_07181707.1| ExsB protein [Escherichia coli MS 200-1]
gi|301049651|ref|ZP_07196600.1| ExsB protein [Escherichia coli MS 185-1]
gi|306813088|ref|ZP_07447281.1| queuosine biosynthesis protein QueC [Escherichia coli NC101]
gi|331645629|ref|ZP_08346732.1| ExsB protein [Escherichia coli M605]
gi|331656501|ref|ZP_08357463.1| ExsB protein [Escherichia coli TA206]
gi|331661825|ref|ZP_08362748.1| ExsB protein [Escherichia coli TA143]
gi|331681839|ref|ZP_08382472.1| ExsB protein [Escherichia coli H299]
gi|81478067|sp|Q8FKA4|QUEC_ECOL6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816225|sp|Q1RF91|QUEC_ECOUT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118574284|sp|Q0TKJ7|QUEC_ECOL5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016427|sp|A1A8B3|QUEC_ECOK1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764335|sp|B7MDA3|QUEC_ECO45 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764338|sp|B7NJ50|QUEC_ECO7I RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764339|sp|B7MQG0|QUEC_ECO81 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764342|sp|B7N8Z8|QUEC_ECOLU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|26106853|gb|AAN79038.1|AE016756_221 Hypothetical protein ybaX [Escherichia coli CFT073]
gi|91071092|gb|ABE05973.1| hypothetical protein YbaX [Escherichia coli UTI89]
gi|110342297|gb|ABG68534.1| putative (aluminum) resistance protein [Escherichia coli 536]
gi|115511828|gb|ABI99902.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|190906037|gb|EDV65652.1| queuosine biosynthesis protein QueC [Escherichia coli F11]
gi|194416322|gb|EDX32513.1| queuosine biosynthesis protein QueC [Shigella dysenteriae 1012]
gi|218364123|emb|CAR01788.1| queuosine biosynthesis protein [Escherichia coli S88]
gi|218368630|emb|CAR16369.1| queuosine biosynthesis protein [Escherichia coli IAI39]
gi|218425872|emb|CAR06678.1| queuosine biosynthesis protein [Escherichia coli ED1a]
gi|218430825|emb|CAR11699.1| queuosine biosynthesis protein [Escherichia coli UMN026]
gi|222032239|emb|CAP74978.1| Queuosine biosynthesis protein queC [Escherichia coli LF82]
gi|226898771|gb|EEH85030.1| queuosine biosynthesis protein queC [Escherichia sp. 3_2_53FAA]
gi|227838631|gb|EEJ49097.1| transcriptional regulator [Escherichia coli 83972]
gi|284920254|emb|CBG33313.1| queuosine biosynthesis protein [Escherichia coli 042]
gi|291429418|gb|EFF02438.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1412]
gi|291433757|gb|EFF06730.1| exsB protein [Escherichia coli B185]
gi|294490301|gb|ADE89057.1| queuosine biosynthesis protein QueC [Escherichia coli IHE3034]
gi|298280290|gb|EFI21794.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1302]
gi|300298588|gb|EFJ54973.1| ExsB protein [Escherichia coli MS 185-1]
gi|300304186|gb|EFJ58706.1| ExsB protein [Escherichia coli MS 200-1]
gi|300355996|gb|EFJ71866.1| ExsB protein [Escherichia coli MS 198-1]
gi|300407626|gb|EFJ91164.1| ExsB protein [Escherichia coli MS 45-1]
gi|305853851|gb|EFM54290.1| queuosine biosynthesis protein QueC [Escherichia coli NC101]
gi|307552351|gb|ADN45126.1| queuosine biosynthesis protein QueC [Escherichia coli ABU 83972]
gi|307628086|gb|ADN72390.1| queuosine biosynthesis protein QueC [Escherichia coli UM146]
gi|312945022|gb|ADR25849.1| queuosine biosynthesis protein QueC [Escherichia coli O83:H1 str.
NRG 857C]
gi|315289838|gb|EFU49228.1| ExsB protein [Escherichia coli MS 110-3]
gi|315294222|gb|EFU53573.1| ExsB protein [Escherichia coli MS 153-1]
gi|315299543|gb|EFU58791.1| ExsB protein [Escherichia coli MS 16-3]
gi|320178274|gb|EFW53248.1| Queuosine Biosynthesis QueC ATPase [Shigella boydii ATCC 9905]
gi|320197082|gb|EFW71701.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli WV_060327]
gi|323191364|gb|EFZ76627.1| queuosine biosynthesis protein queC [Escherichia coli RN587/1]
gi|323952944|gb|EGB48812.1| exsB protein [Escherichia coli H252]
gi|323958637|gb|EGB54340.1| exsB protein [Escherichia coli H263]
gi|324010075|gb|EGB79294.1| ExsB protein [Escherichia coli MS 57-2]
gi|324010658|gb|EGB79877.1| ExsB protein [Escherichia coli MS 60-1]
gi|330910238|gb|EGH38748.1| queuosine Biosynthesis QueC ATPase [Escherichia coli AA86]
gi|331044381|gb|EGI16508.1| ExsB protein [Escherichia coli M605]
gi|331054749|gb|EGI26758.1| ExsB protein [Escherichia coli TA206]
gi|331060247|gb|EGI32211.1| ExsB protein [Escherichia coli TA143]
gi|331081041|gb|EGI52206.1| ExsB protein [Escherichia coli H299]
gi|332085803|gb|EGI90967.1| queuosine biosynthesis protein queC [Shigella dysenteriae 155-74]
gi|332094600|gb|EGI99646.1| queuosine biosynthesis protein queC [Shigella boydii 5216-82]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|312964531|ref|ZP_07778787.1| queuosine biosynthesis protein queC [Escherichia coli 2362-75]
gi|312290765|gb|EFR18642.1| queuosine biosynthesis protein queC [Escherichia coli 2362-75]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWSLAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|256020416|ref|ZP_05434281.1| queuosine biosynthesis protein QueC [Shigella sp. D9]
gi|332281595|ref|ZP_08394008.1| aluminum resistance protein [Shigella sp. D9]
gi|332103947|gb|EGJ07293.1| aluminum resistance protein [Shigella sp. D9]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|224026023|ref|ZP_03644389.1| hypothetical protein BACCOPRO_02776 [Bacteroides coprophilus DSM
18228]
gi|224019259|gb|EEF77257.1| hypothetical protein BACCOPRO_02776 [Bacteroides coprophilus DSM
18228]
Length = 222
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 138/233 (59%), Gaps = 28/233 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E R RK VE
Sbjct: 5 TALVVFSGGQDSTTCLFWAKKHFKKVYALSFIYGQKHVKEVELAREIARKADVEFA---- 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +G + +SLT ++ ++ PNTFVPGRN+ FL AA A
Sbjct: 61 -------VMDVSFIGHLGKNSLTDTSIHMDEEKPADSFPNTFVPGRNLFFLSIAAVHARE 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI+++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K +TW LA
Sbjct: 114 KGISHLVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
++G +++LI E+ TCY G G GC CPAC LR++G EKY
Sbjct: 174 ELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGL----EKY 213
>gi|215485525|ref|YP_002327956.1| queuosine biosynthesis protein QueC [Escherichia coli O127:H6 str.
E2348/69]
gi|254764334|sp|B7UJR7|QUEC_ECO27 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|215263597|emb|CAS07927.1| predicted aluminum resistance protein [Escherichia coli O127:H6
str. E2348/69]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|24111828|ref|NP_706338.1| queuosine biosynthesis protein QueC [Shigella flexneri 2a str. 301]
gi|30061946|ref|NP_836117.1| queuosine biosynthesis protein QueC [Shigella flexneri 2a str.
2457T]
gi|74311024|ref|YP_309443.1| queuosine biosynthesis protein QueC [Shigella sonnei Ss046]
gi|82542932|ref|YP_406879.1| queuosine biosynthesis protein QueC [Shigella boydii Sb227]
gi|157156536|ref|YP_001461631.1| queuosine biosynthesis protein QueC [Escherichia coli E24377A]
gi|157159971|ref|YP_001457289.1| queuosine biosynthesis protein QueC [Escherichia coli HS]
gi|187730250|ref|YP_001879155.1| queuosine biosynthesis protein QueC [Shigella boydii CDC 3083-94]
gi|188491966|ref|ZP_02999236.1| queuosine biosynthesis protein QueC [Escherichia coli 53638]
gi|191168270|ref|ZP_03030064.1| queuosine biosynthesis protein QueC [Escherichia coli B7A]
gi|193064187|ref|ZP_03045271.1| queuosine biosynthesis protein QueC [Escherichia coli E22]
gi|193067732|ref|ZP_03048699.1| queuosine biosynthesis protein QueC [Escherichia coli E110019]
gi|194429020|ref|ZP_03061552.1| queuosine biosynthesis protein QueC [Escherichia coli B171]
gi|209917661|ref|YP_002291745.1| queuosine biosynthesis protein QueC [Escherichia coli SE11]
gi|260842645|ref|YP_003220423.1| putative aluminum resistance protein [Escherichia coli O103:H2 str.
12009]
gi|293418515|ref|ZP_06660950.1| exsB protein [Escherichia coli B088]
gi|300818224|ref|ZP_07098435.1| ExsB protein [Escherichia coli MS 107-1]
gi|300820310|ref|ZP_07100462.1| ExsB protein [Escherichia coli MS 119-7]
gi|300903288|ref|ZP_07121216.1| ExsB protein [Escherichia coli MS 84-1]
gi|301301595|ref|ZP_07207730.1| ExsB protein [Escherichia coli MS 124-1]
gi|307312178|ref|ZP_07591814.1| exsB protein [Escherichia coli W]
gi|309794823|ref|ZP_07689244.1| ExsB protein [Escherichia coli MS 145-7]
gi|312970541|ref|ZP_07784722.1| queuosine biosynthesis protein queC [Escherichia coli 1827-70]
gi|331666800|ref|ZP_08367674.1| ExsB protein [Escherichia coli TA271]
gi|331676116|ref|ZP_08376828.1| ExsB protein [Escherichia coli H591]
gi|81723704|sp|Q83M51|QUEC_SHIFL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816259|sp|Q325F7|QUEC_SHIBS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816261|sp|Q3Z4V4|QUEC_SHISS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016425|sp|A7ZIK2|QUEC_ECO24 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016426|sp|A7ZXA2|QUEC_ECOHS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764343|sp|B6HZQ1|QUEC_ECOSE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764385|sp|B2U4P9|QUEC_SHIB3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24050620|gb|AAN42045.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30040190|gb|AAP15923.1| hypothetical protein S0395 [Shigella flexneri 2a str. 2457T]
gi|73854501|gb|AAZ87208.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81244343|gb|ABB65051.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|157065651|gb|ABV04906.1| queuosine biosynthesis protein QueC [Escherichia coli HS]
gi|157078566|gb|ABV18274.1| queuosine biosynthesis protein QueC [Escherichia coli E24377A]
gi|187427242|gb|ACD06516.1| queuosine biosynthesis protein QueC [Shigella boydii CDC 3083-94]
gi|188487165|gb|EDU62268.1| queuosine biosynthesis protein QueC [Escherichia coli 53638]
gi|190901730|gb|EDV61485.1| queuosine biosynthesis protein QueC [Escherichia coli B7A]
gi|192929216|gb|EDV82826.1| queuosine biosynthesis protein QueC [Escherichia coli E22]
gi|192959144|gb|EDV89580.1| queuosine biosynthesis protein QueC [Escherichia coli E110019]
gi|194412957|gb|EDX29247.1| queuosine biosynthesis protein QueC [Escherichia coli B171]
gi|209910920|dbj|BAG75994.1| conserved hypothetical protein [Escherichia coli SE11]
gi|257757792|dbj|BAI29289.1| predicted aluminum resistance protein [Escherichia coli O103:H2
str. 12009]
gi|281599784|gb|ADA72768.1| Queuosine biosynthesis protein queC [Shigella flexneri 2002017]
gi|291325043|gb|EFE64458.1| exsB protein [Escherichia coli B088]
gi|300404583|gb|EFJ88121.1| ExsB protein [Escherichia coli MS 84-1]
gi|300527095|gb|EFK48164.1| ExsB protein [Escherichia coli MS 119-7]
gi|300529115|gb|EFK50177.1| ExsB protein [Escherichia coli MS 107-1]
gi|300843092|gb|EFK70852.1| ExsB protein [Escherichia coli MS 124-1]
gi|306907680|gb|EFN38182.1| exsB protein [Escherichia coli W]
gi|308121476|gb|EFO58738.1| ExsB protein [Escherichia coli MS 145-7]
gi|310337190|gb|EFQ02328.1| queuosine biosynthesis protein queC [Escherichia coli 1827-70]
gi|313646929|gb|EFS11386.1| queuosine biosynthesis protein queC [Shigella flexneri 2a str.
2457T]
gi|315059724|gb|ADT74051.1| predicted aluminum resistance protein [Escherichia coli W]
gi|315256272|gb|EFU36240.1| ExsB protein [Escherichia coli MS 85-1]
gi|320186074|gb|EFW60819.1| Queuosine Biosynthesis QueC ATPase [Shigella flexneri CDC 796-83]
gi|320201688|gb|EFW76264.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli EC4100B]
gi|323160445|gb|EFZ46393.1| queuosine biosynthesis protein queC [Escherichia coli E128010]
gi|323164247|gb|EFZ50054.1| queuosine biosynthesis protein queC [Shigella sonnei 53G]
gi|323170531|gb|EFZ56181.1| queuosine biosynthesis protein queC [Escherichia coli LT-68]
gi|323184725|gb|EFZ70096.1| queuosine biosynthesis protein queC [Escherichia coli 1357]
gi|323379711|gb|ADX51979.1| exsB protein [Escherichia coli KO11]
gi|323938630|gb|EGB34879.1| exsB protein [Escherichia coli E1520]
gi|323945350|gb|EGB41406.1| exsB protein [Escherichia coli H120]
gi|324016695|gb|EGB85914.1| ExsB protein [Escherichia coli MS 117-3]
gi|324116932|gb|EGC10845.1| exsB protein [Escherichia coli E1167]
gi|331066024|gb|EGI37908.1| ExsB protein [Escherichia coli TA271]
gi|331076174|gb|EGI47456.1| ExsB protein [Escherichia coli H591]
gi|332098666|gb|EGJ03632.1| queuosine biosynthesis protein queC [Shigella boydii 3594-74]
gi|332341808|gb|AEE55142.1| queuosine biosynthesis protein QueC [Escherichia coli UMNK88]
gi|332760735|gb|EGJ91023.1| queuosine biosynthesis protein queC [Shigella flexneri 4343-70]
gi|332761453|gb|EGJ91735.1| queuosine biosynthesis protein queC [Shigella flexneri 2747-71]
gi|332763743|gb|EGJ93981.1| queuosine biosynthesis protein queC [Shigella flexneri K-671]
gi|332768366|gb|EGJ98550.1| 7-cyano-7-deazaguanine synthase [Shigella flexneri 2930-71]
gi|333008015|gb|EGK27491.1| queuosine biosynthesis protein queC [Shigella flexneri K-218]
gi|333008130|gb|EGK27605.1| queuosine biosynthesis protein queC [Shigella flexneri VA-6]
gi|333010905|gb|EGK30331.1| queuosine biosynthesis protein queC [Shigella flexneri K-272]
gi|333020707|gb|EGK39967.1| queuosine biosynthesis protein queC [Shigella flexneri K-227]
gi|333021903|gb|EGK41151.1| queuosine biosynthesis protein queC [Shigella flexneri K-304]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|300715598|ref|YP_003740401.1| Queuosine biosynthesis protein QueC [Erwinia billingiae Eb661]
gi|299061434|emb|CAX58546.1| Queuosine biosynthesis protein QueC [Erwinia billingiae Eb661]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 140/231 (60%), Gaps = 26/231 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E +++ + S
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAE-----------IDIARELSLS 52
Query: 71 LGE--DHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG +L + +L +++ SSLT+ A + LP+TFVPGRNI+FL A+ AY
Sbjct: 53 LGARAHKVLDVTMLNELAVSSLTRESIPVPAYDPDASGLPSTFVPGRNILFLTLASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ AI LGM V TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNHAIELGMARSVRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D Q + L+ E+ TCY G++ G GC C AC+LR KG E++
Sbjct: 173 -DYWQQ--LPLVRNETLTCYNGEK------GDGCGECAACHLRAKGLNEYQ 214
>gi|152979669|ref|YP_001345298.1| exsB protein [Actinobacillus succinogenes 130Z]
gi|189038890|sp|A6VQW6|QUEC_ACTSZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|150841392|gb|ABR75363.1| exsB protein [Actinobacillus succinogenes 130Z]
Length = 235
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 141/228 (61%), Gaps = 26/228 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +EL+ +W
Sbjct: 12 AVVIFSGGQDSTTCLLQAIRDYGPNNVEAVTFQYGQRHAIELQ------------KAQWI 59
Query: 68 KDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+ +++ + +K +N +PNTFV GRN +FL++AA A
Sbjct: 60 AQDLGVKQTLIDTSVIKTITTNAMMSDAQIKQDENGMPNTFVDGRNALFLLYAAIYAKGQ 119
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR+ I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 120 GITDIITGVCETDFSGYPDCRNVFIKSMNVTLNLAMDYQFNIRTPLMYLTKAQTWQLADE 179
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D V + +HTCYLG GC +CP+C LR+KG ++
Sbjct: 180 LGALDYVR---QYTHTCYLGVEG-------GCGTCPSCLLREKGLKQY 217
>gi|331651382|ref|ZP_08352407.1| ExsB protein [Escherichia coli M718]
gi|331051123|gb|EGI23175.1| ExsB protein [Escherichia coli M718]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|311280659|ref|YP_003942890.1| exsB protein [Enterobacter cloacae SCF1]
gi|308749854|gb|ADO49606.1| exsB protein [Enterobacter cloacae SCF1]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 138/229 (60%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARTLALQLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL A AY+
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPDADGIPNTFVPGRNILFLTLTAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMWL K +TW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWLDKAQTWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YWGKLDLVR---NETLTCYNGVK------GDGCGQCAACNLRSNGLSHY 213
>gi|269138354|ref|YP_003295054.1| queuosine biosynthesis protein QueC [Edwardsiella tarda EIB202]
gi|267984014|gb|ACY83843.1| queuosine biosynthesis protein QueC [Edwardsiella tarda EIB202]
gi|304558386|gb|ADM41050.1| Queuosine Biosynthesis QueC ATPase [Edwardsiella tarda FL6-60]
Length = 229
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 140/226 (61%), Gaps = 20/226 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL R+D V ++FDYGQR++ E++ + K++ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALHRYDDVHCITFDYGQRHRAEIDVARRLAKQLGASAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L + +L +++ SSLT+ N+ + Q ++ +PNTFVPGRN++FL AA AY++
Sbjct: 60 -----VLDVGLLNELAISSLTRDNIPVPTQSEDGIPNTFVPGRNVLFLTLAAIYAYQVEA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
++ GVCETD+SGYPDCR ++A+ A+ LGM + TPLMWL K ETW LA D
Sbjct: 115 EAVITGVCETDFSGYPDCRDQFVQALNHAVCLGMARDIRFETPLMWLNKAETWALA-DYY 173
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GQ + + ++ TCY G + G GC C AC+LR G ++
Sbjct: 174 GQ--LERVRHDTLTCYNGIQ------GDGCGHCAACHLRAHGLQQY 211
>gi|170680140|ref|YP_001742588.1| queuosine biosynthesis protein QueC [Escherichia coli SMS-3-5]
gi|300937061|ref|ZP_07151927.1| ExsB protein [Escherichia coli MS 21-1]
gi|254764344|sp|B1LJK1|QUEC_ECOSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|170517858|gb|ACB16036.1| queuosine biosynthesis protein QueC [Escherichia coli SMS-3-5]
gi|300457892|gb|EFK21385.1| ExsB protein [Escherichia coli MS 21-1]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|281177615|dbj|BAI53945.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|320176589|gb|EFW51633.1| Queuosine Biosynthesis QueC ATPase [Shigella dysenteriae CDC
74-1112]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|238023182|ref|ZP_04603608.1| hypothetical protein GCWU000324_03108 [Kingella oralis ATCC 51147]
gi|237865565|gb|EEP66705.1| hypothetical protein GCWU000324_03108 [Kingella oralis ATCC 51147]
Length = 217
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 134/229 (58%), Gaps = 26/229 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL A+ V+T+SF YGQR+ VEL+ W
Sbjct: 5 TALVIFSGGQDSTTCLFQAIADCGAGNVQTISFQYGQRHAVELQ------------RAAW 52
Query: 68 -KDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H +L L+ +G+I+H++L + A Q N PNTFV GRN +FL++AA A
Sbjct: 53 IAQDLGVPHTVLDLSAIGNITHNALMDSSAPIQQAGNTPNTFVDGRNALFLLYAAIHAKA 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K +TW LA
Sbjct: 113 QGIHRIYTGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPFDIRTPLMWLTKKQTWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D + +HTCY+G GC+ CPAC LR++G E+
Sbjct: 173 QLGAFDYIR---AHTHTCYMGVAG-------GCHQCPACILRERGLREY 211
>gi|251790642|ref|YP_003005363.1| exsB protein [Dickeya zeae Ech1591]
gi|247539263|gb|ACT07884.1| exsB protein [Dickeya zeae Ech1591]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 141/230 (61%), Gaps = 22/230 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + + + K
Sbjct: 3 SAVVVFSGGQDSTTCLIQALQQYDDVHCVTFDYGQRHRAEIDVAAALAQTLGARAHK--- 59
Query: 70 SLGEDHILPLAILGDISHSSLTK-NVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + D + LP+TFVPGRNI+FL A+ AY+
Sbjct: 60 ------VLNVGLLNELAVSSLTRDNIPVPEFDATADGLPSTFVPGRNILFLTLASIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++A+ A+ LG+ + TPLMWL K ETW LA
Sbjct: 114 VGADTVITGVCETDFSGYPDCRDEFVKALNQAVALGLAKDIRFVTPLMWLNKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D Q + + + TCY G + G GC C AC+LR KG E++
Sbjct: 173 DYYQQ--LETVKNHTLTCYNGIK------GTGCGQCAACHLRAKGLAEYQ 214
>gi|16128429|ref|NP_414978.1| required for 7-cyano-7-deazaguanine (preQ0) synthesis [Escherichia
coli str. K-12 substr. MG1655]
gi|89107314|ref|AP_001094.1| predicted aluminum resistance protein [Escherichia coli str. K-12
substr. W3110]
gi|170080030|ref|YP_001729350.1| enzyme in preQ0 biosynthesis [Escherichia coli str. K-12 substr.
DH10B]
gi|238899732|ref|YP_002925528.1| putative aluminum resistance protein [Escherichia coli BW2952]
gi|256023937|ref|ZP_05437802.1| queuosine biosynthesis protein QueC [Escherichia sp. 4_1_40B]
gi|260853667|ref|YP_003227558.1| putative aluminum resistance protein [Escherichia coli O26:H11 str.
11368]
gi|260866605|ref|YP_003233007.1| putative aluminum resistance protein [Escherichia coli O111:H- str.
11128]
gi|300947903|ref|ZP_07162051.1| ExsB protein [Escherichia coli MS 116-1]
gi|300958012|ref|ZP_07170176.1| ExsB protein [Escherichia coli MS 175-1]
gi|301025651|ref|ZP_07189171.1| ExsB protein [Escherichia coli MS 196-1]
gi|301647370|ref|ZP_07247182.1| ExsB protein [Escherichia coli MS 146-1]
gi|307137089|ref|ZP_07496445.1| queuosine biosynthesis protein QueC [Escherichia coli H736]
gi|331640964|ref|ZP_08342099.1| ExsB protein [Escherichia coli H736]
gi|2495537|sp|P77756|QUEC_ECOLI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764341|sp|B1XFN2|QUEC_ECODH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|259551522|sp|C4ZTK1|QUEC_ECOBW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|1580715|dbj|BAA11648.1| YbaX [Escherichia coli W3110]
gi|1773128|gb|AAB40200.1| similar to H. influenzae HI1191 [Escherichia coli]
gi|1786648|gb|AAC73547.1| required for 7-cyano-7-deazaguanine (preQ0) synthesis [Escherichia
coli str. K-12 substr. MG1655]
gi|85674584|dbj|BAE76224.1| predicted aluminum resistance protein [Escherichia coli str. K12
substr. W3110]
gi|169887865|gb|ACB01572.1| enzyme in preQ0 biosynthesis [Escherichia coli str. K-12 substr.
DH10B]
gi|238862146|gb|ACR64144.1| predicted aluminum resistance protein [Escherichia coli BW2952]
gi|257752316|dbj|BAI23818.1| predicted aluminum resistance protein [Escherichia coli O26:H11
str. 11368]
gi|257762961|dbj|BAI34456.1| predicted aluminum resistance protein [Escherichia coli O111:H-
str. 11128]
gi|260450369|gb|ACX40791.1| exsB protein [Escherichia coli DH1]
gi|299880032|gb|EFI88243.1| ExsB protein [Escherichia coli MS 196-1]
gi|300315279|gb|EFJ65063.1| ExsB protein [Escherichia coli MS 175-1]
gi|300452503|gb|EFK16123.1| ExsB protein [Escherichia coli MS 116-1]
gi|301074515|gb|EFK89321.1| ExsB protein [Escherichia coli MS 146-1]
gi|315135126|dbj|BAJ42285.1| queuosine biosynthesis protein QueC [Escherichia coli DH1]
gi|315616615|gb|EFU97232.1| queuosine biosynthesis protein queC [Escherichia coli 3431]
gi|323153481|gb|EFZ39735.1| queuosine biosynthesis protein queC [Escherichia coli EPECa14]
gi|323178287|gb|EFZ63865.1| queuosine biosynthesis protein queC [Escherichia coli 1180]
gi|323943251|gb|EGB39407.1| exsB protein [Escherichia coli E482]
gi|331037762|gb|EGI09982.1| ExsB protein [Escherichia coli H736]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGFK------GDGCGHCAACNLRANGLNHY 213
>gi|261401301|ref|ZP_05987426.1| ExsB protein [Neisseria lactamica ATCC 23970]
gi|269208680|gb|EEZ75135.1| ExsB protein [Neisseria lactamica ATCC 23970]
Length = 218
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 23/233 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++FSGGQDS+TCL A+ + R V ++F YGQR+ VELE + + + +P+
Sbjct: 6 ALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG--VPQT- 62
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ L ++ I+H++L + A++ DN +PNTFV GRN +FL++AA A G
Sbjct: 63 -------LVDLNLMKTITHNALMDEAAAIETVDNGVPNTFVDGRNALFLLYAAIHAKGQG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA ++
Sbjct: 116 IRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALADEM 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
G D + E++HTCY G GC+ CP+C LR++G E+ E D
Sbjct: 176 GALDYIR---EQTHTCYNGIVG-------GCHECPSCILRERGLAEYLESIVD 218
>gi|283834237|ref|ZP_06353978.1| ExsB protein [Citrobacter youngae ATCC 29220]
gi|291069754|gb|EFE07863.1| ExsB protein [Citrobacter youngae ATCC 29220]
Length = 231
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ AL ++D V ++FDYGQR++ E++ R ++L +
Sbjct: 4 AVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDV---ARDLALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D N +PNTFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVTLLSELAVSSLTRD-NIPVPDYEPDANGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VQAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YWGKLDLVR---AETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|170767792|ref|ZP_02902245.1| queuosine biosynthesis protein QueC [Escherichia albertii TW07627]
gi|170123280|gb|EDS92211.1| queuosine biosynthesis protein QueC [Escherichia albertii TW07627]
Length = 231
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 139/229 (60%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L ++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNQLAVSSLTRD-SIPVPDYEPDADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---SETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|330011622|ref|ZP_08307127.1| protein ExsB [Klebsiella sp. MS 92-3]
gi|328534106|gb|EGF60743.1| protein ExsB [Klebsiella sp. MS 92-3]
Length = 233
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+ + K
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D +PNTFVPGRNI+FL A AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-NIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 114 VKAEAIITGVCETDFSGYPDCRDEFVKALHNAVSLGMAKDIRFETPLMWLNKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ E+ TCY G + G GC C AC LR G ++
Sbjct: 173 DYWGQ--LDLVRRETLTCYNGIK------GDGCGQCAACNLRANGLNQY 213
>gi|227113472|ref|ZP_03827128.1| queuosine biosynthesis protein QueC [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 231
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 137/229 (59%), Gaps = 22/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + +K+ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIDVARELSQKLGATAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ + + D N +PNTFVPGRNI+FL AA AY++
Sbjct: 60 -----VLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLAAIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW LA
Sbjct: 115 GAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALADH 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D V + TCY G + G GC C AC+LR G +++
Sbjct: 175 YQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQ 214
>gi|296101567|ref|YP_003611713.1| queuosine biosynthesis protein QueC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295056026|gb|ADF60764.1| queuosine biosynthesis protein QueC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 231
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 137/225 (60%), Gaps = 24/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALHQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL A AY+
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYKPDASGIPNTFVPGRNILFLTLTAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM TPLMWL K ETW LA
Sbjct: 114 VQAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKETRFETPLMWLDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
G DLV E+ TCY G + G GC C AC LR G
Sbjct: 174 YWGKLDLVR---SETLTCYNGIK------GDGCGQCAACNLRANG 209
>gi|52425910|ref|YP_089047.1| hypothetical protein MS1855 [Mannheimia succiniciproducens MBEL55E]
gi|52307962|gb|AAU38462.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 251
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 138/228 (60%), Gaps = 26/228 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE KW
Sbjct: 41 AVVIFSGGQDSTTCLLKAIADYGVENVEAVTFQYGQRHAIELE------------KAKWI 88
Query: 68 KDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+ +++ N+ + + +PNTFV GRN +FL++ A A
Sbjct: 89 AQDLGIKQTLIDTSVIKTITANAMMDNIKITKDEAGMPNTFVDGRNALFLLYTAIYAKGQ 148
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLM+L K +TW+LA +
Sbjct: 149 GIRDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIHTPLMYLTKAQTWQLADE 208
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G +N + E +HTCYLG GC SCP+C LR+ G ++
Sbjct: 209 LGA---LNYVREHTHTCYLGVEG-------GCGSCPSCILRENGLQQY 246
>gi|50120094|ref|YP_049261.1| queuosine biosynthesis protein QueC [Pectobacterium atrosepticum
SCRI1043]
gi|81645861|sp|Q6D820|QUEC_ERWCT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|49610620|emb|CAG74065.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 231
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 138/230 (60%), Gaps = 22/230 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E+E + +K+ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ + + D N +PNTFVPGRNI+FL A+ AY++
Sbjct: 60 -----VLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW LA
Sbjct: 115 GAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALADY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
D V + TCY G + G GC C AC+LR G ++++
Sbjct: 175 YQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQK 215
>gi|325267556|ref|ZP_08134208.1| transcription regulator ExsB [Kingella denitrificans ATCC 33394]
gi|324980906|gb|EGC16566.1| transcription regulator ExsB [Kingella denitrificans ATCC 33394]
Length = 217
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 140/228 (61%), Gaps = 25/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++FSGGQDS+TCL A+ ++ + V+ ++F YGQR+ +ELE + ++
Sbjct: 4 ALVVFSGGQDSTTCLFQAMQQYGAENVQAITFAYGQRHGIELERAASIAQE--------- 54
Query: 69 DSLG-EDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG +L L+++ I+H++LT A++ +PNTFV GRN +FL++AA A
Sbjct: 55 --LGIRQTVLDLSLITAITHNALTDAQAAIETDAQGMPNTFVDGRNALFLLYAAIYAKSQ 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +I IGVCETD+SGYPDCR ++++ +NL M +HTPLM+L K ETW LA +
Sbjct: 113 NIRDIFIGVCETDFSGYPDCRQIFVQSMNVTLNLAMAYDFRLHTPLMYLTKKETWALADE 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G +++ I +HTCYLG GC+ CP+C LR++G E+
Sbjct: 173 LG---VLDYIRTRTHTCYLGVDG-------GCHECPSCVLRERGLAEY 210
>gi|309379634|emb|CBX21805.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 218
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 145/233 (62%), Gaps = 23/233 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++FSGGQDS+TCL A+ + R V ++F YGQR+ VELE + + + +P+
Sbjct: 6 ALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG--VPQT- 62
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ L ++ I+H++L + A++ +N +PNTFV GRN +FL++AA A G
Sbjct: 63 -------LVDLNLMKTITHNALMDEAAAIETAENGVPNTFVDGRNALFLLYAAIYAKGQG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA ++
Sbjct: 116 IRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALADEM 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
G +++ I E++HTCY G GC+ CP+C LR++G E+ E D
Sbjct: 176 G---VLDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLESIVD 218
>gi|85058654|ref|YP_454356.1| queuosine biosynthesis protein QueC [Sodalis glossinidius str.
'morsitans']
gi|110816262|sp|Q2NV74|QUEC_SODGM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|84779174|dbj|BAE73951.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 231
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 141/233 (60%), Gaps = 22/233 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ RK ++L +
Sbjct: 4 AVVVFSGGQDSTTCLIQALSQYDEVHCVTFDYGQRHRAEIDV---ARKLAMQLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
++ +L ++ SSLT+ N+ +++ LP+TFVPGRNI+FL AA AY++
Sbjct: 57 --AHKVIDAGLLNALAVSSLTRDNITFPGYEDSAGGLPSTFVPGRNILFLTLAAIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ ++ GVCETD+SGYPDCR + I+A+ A+NLGM ++ TPLMWL K ETW LA
Sbjct: 115 EASAVITGVCETDFSGYPDCRDNFIKALNAAVNLGMARELSFVTPLMWLDKAETWALADY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D V ++ TCY G + G GC C AC+LR G ++ + Q
Sbjct: 175 YHQLDRVR---HDTLTCYNGIK------GDGCGQCAACHLRTHGLAAYRAQPQ 218
>gi|218709345|ref|YP_002416966.1| putative ATPase [Vibrio splendidus LGP32]
gi|218322364|emb|CAV18511.1| predicted ATPase [Vibrio splendidus LGP32]
Length = 197
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 131/199 (65%), Gaps = 15/199 (7%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHRLEIEVAESLSKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VKAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 115 ANTVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDKPLDIKTPLMWLNKAETWALADQY 174
Query: 188 GGQDLVNLILEESHTCYLG 206
+LV ++ TCY G
Sbjct: 175 SALELVR---NKTLTCYNG 190
>gi|329119474|ref|ZP_08248159.1| transcription regulator ExsB [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464407|gb|EGF10707.1| transcription regulator ExsB [Neisseria bacilliformis ATCC
BAA-1200]
Length = 384
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 142/227 (62%), Gaps = 23/227 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++FSGGQDS+TCL A+ + R V+T+SF YGQR+ VELE R + + +
Sbjct: 6 ALVIFSGGQDSTTCLIQAIQTYGRENVQTISFQYGQRHAVELE-----RARSIA-----Q 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D + IL L+++ I+ ++LT N A++ N LPNTFV GRN +FL++AA A
Sbjct: 56 DWGVKQTILDLSLIKHITQNALTDNTAAIQTAANGLPNTFVDGRNALFLLYAAICAKGQN 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW+LA +
Sbjct: 116 IRHIITGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYPFQIHTPLMYLTKAQTWELADKL 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G ++ I + +HTCY G GC+ CPAC LR++G ++
Sbjct: 176 G---CLDYIRDHTHTCYNGVIG-------GCHQCPACQLRERGLAQY 212
>gi|304395506|ref|ZP_07377389.1| exsB protein [Pantoea sp. aB]
gi|304356800|gb|EFM21164.1| exsB protein [Pantoea sp. aB]
Length = 231
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 139/224 (62%), Gaps = 22/224 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+++D V ++FDYGQR++ E+E + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALEQYDEVHCVTFDYGQRHREEIEVARDLASKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ A + + LP+TFVPGRNI+FL A+ AY++
Sbjct: 60 -----VLDVTMLNELAVSSLTRDNIPVPAYNPEASGLPSTFVPGRNILFLTLASVYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR + ++A+ A++LGM V TPLMWL K ETW LA D
Sbjct: 115 EAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAREVRFETPLMWLNKAETWALA-D 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
Q ++L+ E++ TCY G + G GC C AC LR G
Sbjct: 174 YWQQ--LSLVREQTLTCYNGVK------GDGCGECAACNLRANG 209
>gi|152968979|ref|YP_001334088.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262042480|ref|ZP_06015639.1| transcription regulator ExsB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|167016431|sp|A6T5I7|QUEC_KLEP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|150953828|gb|ABR75858.1| putative (aluminum) resistance protein [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|259040184|gb|EEW41296.1| transcription regulator ExsB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 233
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+ + K
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D +PNTFVPGRNI+FL A AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-NIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 114 VKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ E+ TCY G + G GC C AC LR G ++
Sbjct: 173 DYWGQ--LDLVRRETLTCYNGIK------GDGCGQCAACNLRANGLNQY 213
>gi|302874094|ref|YP_003842727.1| exsB protein [Clostridium cellulovorans 743B]
gi|307689650|ref|ZP_07632096.1| exsB protein [Clostridium cellulovorans 743B]
gi|302576951|gb|ADL50963.1| exsB protein [Clostridium cellulovorans 743B]
Length = 222
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 141/236 (59%), Gaps = 22/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K L++ SGGQDS+TCL WA+ F V+ + F+YGQR+++EL+C +KI E
Sbjct: 6 KEQDILVVLSGGQDSTTCLFWAIKNFRNVKAIGFNYGQRHELELQCA----RKICE---- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ +L + +L ++ +SLT+ V + + PN+ V GRN+IFL FAA A
Sbjct: 58 --ENNVSYEVLDMGLLNQLTTNSLTRKDIEVQAAKEGESTPNSLVEGRNMIFLTFAAVYA 115
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
I +IV GV ++D+SGYPDCR I+++ +NL M+ +HTPLMWL K +TWKL
Sbjct: 116 KTHNIKHIVTGVSQSDFSGYPDCRDTFIKSLNVTLNLSMDYEYVIHTPLMWLDKCDTWKL 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ D+G +++ I + + TCY G G GC CP+C LR +G EF +KY+
Sbjct: 176 SDDLG---VLDTIKDRTLTCYNGI------IGAGCGICPSCLLRARGLEEFYKKYR 222
>gi|110816231|sp|Q65RE8|QUEC_MANSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 222
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 139/233 (59%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE KW
Sbjct: 12 AVVIFSGGQDSTTCLLKAIADYGVENVEAVTFQYGQRHAIELE------------KAKWI 59
Query: 68 KDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+ +++ N+ + + +PNTFV GRN +FL++ A A
Sbjct: 60 AQDLGIKQTLIDTSVIKTITANAMMDNIKITKDEAGMPNTFVDGRNALFLLYTAIYAKGQ 119
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLM+L K +TW+LA +
Sbjct: 120 GIRDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIHTPLMYLTKAQTWQLADE 179
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G +N + E +HTCYLG GC SCP+C LR+ G ++ Q
Sbjct: 180 LGA---LNYVREHTHTCYLGVEG-------GCGSCPSCILRENGLQQYLASKQ 222
>gi|219871540|ref|YP_002475915.1| queuosine biosynthesis protein QueC [Haemophilus parasuis SH0165]
gi|254764350|sp|B8F6L5|QUEC_HAEPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|219691744|gb|ACL32967.1| queuosine biosynthesis protein QueC [Haemophilus parasuis SH0165]
Length = 219
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 138/237 (58%), Gaps = 26/237 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +EL+
Sbjct: 1 MKPTPKAVVIFSGGQDSTTCLFLAIKEFGKENVEVVTFQYGQRHAIELD----------- 49
Query: 63 LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+W +D + ++ +++ I+ ++L + A Q N PNTFV GRN +FL++ A
Sbjct: 50 -KARWIAQDLGVKQTLIDTSVIKAITTNALMDDQAEIKQTGNTPNTFVDGRNALFLLYTA 108
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+SGYPDCR I+++ +NL M+ + + TPLM+L K ET
Sbjct: 109 IYAKSQGIQTIYTGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYNFNIRTPLMYLTKKET 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
W LA +G D + +HTCYLG GC++CP+C LR+KG E+ E+
Sbjct: 169 WALADQLGAFDYIR---THTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLEE 215
>gi|238893393|ref|YP_002918127.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae
NTUH-K2044]
gi|238545709|dbj|BAH62060.1| putative (aluminum) resistance protein [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 233
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+ + K
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D +PNTFVPGRNI+FL A AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-NIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 114 VKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D GQ ++L+ E+ TCY G + G GC C AC LR G ++
Sbjct: 173 DYWGQ--LDLVRRETLTCYNGIK------GDGCGQCAACNLRANGRNQY 213
>gi|223041977|ref|ZP_03612161.1| queuosine biosynthesis protein QueC [Actinobacillus minor 202]
gi|223017234|gb|EEF15662.1| queuosine biosynthesis protein QueC [Actinobacillus minor 202]
Length = 221
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 139/234 (59%), Gaps = 26/234 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+++ A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE
Sbjct: 1 MQQPQKAIVIFSGGQDSTTCLFQAIAEFGKENVEVITFQYGQRHAIELE----------- 49
Query: 63 LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+W +D + ++ +++ I+ ++L A Q + PNTFV GRN +FL++AA
Sbjct: 50 -KAQWIAQDLGVKQTLVDTSLIKAITSNALMDEQAKIEQQGDKPNTFVDGRNALFLLYAA 108
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A R GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K ET
Sbjct: 109 IYAKRQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKET 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W+LA +G D + + +HTCYLG GC++CP+C LR+KG E+
Sbjct: 169 WRLADQLGAFDYIR---QHTHTCYLGVEG-------GCHTCPSCLLREKGLNEY 212
>gi|110804472|ref|YP_687992.1| queuosine biosynthesis protein QueC [Shigella flexneri 5 str. 8401]
gi|123048404|sp|Q0T7D9|QUEC_SHIF8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110614020|gb|ABF02687.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 231
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQ+++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQQHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|15800174|ref|NP_286186.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7
EDL933]
gi|15829752|ref|NP_308525.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
Sakai]
gi|168747880|ref|ZP_02772902.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4113]
gi|168754549|ref|ZP_02779556.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4401]
gi|168760401|ref|ZP_02785408.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4501]
gi|168768399|ref|ZP_02793406.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4486]
gi|168777140|ref|ZP_02802147.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4196]
gi|168778937|ref|ZP_02803944.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4076]
gi|168786295|ref|ZP_02811302.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC869]
gi|168798008|ref|ZP_02823015.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC508]
gi|195936008|ref|ZP_03081390.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4024]
gi|208805824|ref|ZP_03248161.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4206]
gi|208816134|ref|ZP_03257313.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4045]
gi|208823253|ref|ZP_03263571.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4042]
gi|209396500|ref|YP_002269091.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4115]
gi|217325252|ref|ZP_03441336.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
TW14588]
gi|254791628|ref|YP_003076465.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
TW14359]
gi|261223927|ref|ZP_05938208.1| enzyme in preQ0 biosynthesis [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256359|ref|ZP_05948892.1| enzyme in preQ0 biosynthesis [Escherichia coli O157:H7 str.
FRIK966]
gi|291281351|ref|YP_003498169.1| Queuosine biosynthesis protein queC [Escherichia coli O55:H7 str.
CB9615]
gi|81766178|sp|Q8XE52|QUEC_ECO57 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764337|sp|B5Z3V1|QUEC_ECO5E RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|12513306|gb|AAG54794.1|AE005223_9 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13359955|dbj|BAB33921.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187767546|gb|EDU31390.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4196]
gi|188017662|gb|EDU55784.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4113]
gi|189003020|gb|EDU72006.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4076]
gi|189357982|gb|EDU76401.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4401]
gi|189362373|gb|EDU80792.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4486]
gi|189369159|gb|EDU87575.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4501]
gi|189373665|gb|EDU92081.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC869]
gi|189379336|gb|EDU97752.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC508]
gi|208725625|gb|EDZ75226.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4206]
gi|208732782|gb|EDZ81470.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4045]
gi|208737446|gb|EDZ85130.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4042]
gi|209157900|gb|ACI35333.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4115]
gi|209778638|gb|ACI87631.1| hypothetical protein ECs0498 [Escherichia coli]
gi|209778640|gb|ACI87632.1| hypothetical protein ECs0498 [Escherichia coli]
gi|209778642|gb|ACI87633.1| hypothetical protein ECs0498 [Escherichia coli]
gi|209778644|gb|ACI87634.1| hypothetical protein ECs0498 [Escherichia coli]
gi|209778646|gb|ACI87635.1| hypothetical protein ECs0498 [Escherichia coli]
gi|217321473|gb|EEC29897.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
TW14588]
gi|254591028|gb|ACT70389.1| enzyme in preQ0 biosynthesis [Escherichia coli O157:H7 str.
TW14359]
gi|290761224|gb|ADD55185.1| Queuosine biosynthesis protein queC [Escherichia coli O55:H7 str.
CB9615]
gi|320192860|gb|EFW67500.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli O157:H7 str.
EC1212]
gi|320638439|gb|EFX08153.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
G5101]
gi|320643820|gb|EFX12943.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H- str.
493-89]
gi|320649171|gb|EFX17749.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H- str.
H 2687]
gi|320656064|gb|EFX23980.1| queuosine biosynthesis protein QueC [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661214|gb|EFX28645.1| queuosine biosynthesis protein QueC [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665190|gb|EFX32283.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
LSU-61]
gi|326341208|gb|EGD65000.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli O157:H7 str.
1044]
gi|326346017|gb|EGD69756.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli O157:H7 str.
1125]
Length = 231
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 139/229 (60%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGARAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTLLNELAVSSLTRD-SIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++ + A++LGM + TPLMW+ K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKVLNHAVSLGMAKDIRFETPLMWIDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YYGKLDLVR---NETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213
>gi|56963894|ref|YP_175625.1| aluminum resistance protein [Bacillus clausii KSM-K16]
gi|81366060|sp|Q5WG41|QUEC_BACSK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56910137|dbj|BAD64664.1| aluminum resistance protein [Bacillus clausii KSM-K16]
Length = 221
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 137/222 (61%), Gaps = 21/222 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WA +R+ + + FDYGQR+K E++C + + + + +P
Sbjct: 6 AVVVFSGGQDSTTCLFWAKERYRSLHAVIFDYGQRHKEEIQCAVDIANE--QGVPY---- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + +L ++ ++LT+ N++++ + P+TFV GRN +FL FAA A +G
Sbjct: 60 ----KVFDMGLLNQLTANALTRENISVQAGEAGESPSTFVAGRNHLFLSFAAVYAREMGA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLMWL K ETW LA +G
Sbjct: 116 KHIITGVCETDFSGYPDCRDVFVKSLNVTLNLAMDEQFVIHTPLMWLNKKETWALADKMG 175
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ I ++ TCY G R G GC +CP+C LRQ G
Sbjct: 176 ---QLEYIRAKTLTCYEGIR------GDGCGTCPSCQLRQNG 208
>gi|293392538|ref|ZP_06636858.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
gi|291424940|gb|EFE98149.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
Length = 232
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 143/237 (60%), Gaps = 27/237 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E +++ + S
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAE-----------IDVAQELSHS 52
Query: 71 LGED--HILPLAILGDISHSSLTK-NVAMKI----QDNNLPNTFVPGRNIIFLVFAATLA 123
LG IL + +L +++ SSLT+ N+ + + LP+TFVPGRNI+FL AA A
Sbjct: 53 LGAKAHKILDVGLLNELAISSLTRDNIPVPAFGSETEGGLPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW L
Sbjct: 113 YQVEAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A D Q ++ I +++ TCY G + G GC C AC+LR G +++ + D
Sbjct: 173 A-DYYHQ--LDRIRQDTLTCYNGIK------GDGCGECAACHLRANGLTQYQSRQAD 220
>gi|325578616|ref|ZP_08148716.1| transcription regulator ExsB [Haemophilus parainfluenzae ATCC
33392]
gi|325159852|gb|EGC71982.1| transcription regulator ExsB [Haemophilus parainfluenzae ATCC
33392]
Length = 225
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 138/229 (60%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + + VET++F YGQR+ +ELE +W
Sbjct: 12 ALVIFSGGQDSTTCLIQAIAEYGVENVETVTFQYGQRHSIELE------------KARWI 59
Query: 68 -KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
KD + ++ +++ I+H++L N ++ +D LPNTFV GRN +FL++AA A
Sbjct: 60 AKDLGVKQTLIDTSVIKSITHNALMDANADIEQKDGELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW LA
Sbjct: 120 QGINDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPFNLKTPLMYLTKAQTWALAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D I + +HTCY G GC CP+C LR KG +E+
Sbjct: 180 ELGTLD---YIRQHTHTCYEGVEG-------GCRECPSCKLRDKGLLEY 218
>gi|293391376|ref|ZP_06635710.1| ExsB protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951910|gb|EFE02029.1| ExsB protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 276
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 135/233 (57%), Gaps = 28/233 (12%)
Query: 4 IIKKAPS-ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
I+ P+ AL++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE
Sbjct: 44 IMSNQPNKALVIFSGGQDSTTCLFLAMQEFGAENVEVITFQYGQRHAIELE--------- 94
Query: 61 VELMPKW--KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLV 117
+W +D + +L +++ I+H++L N + +DN LPNTFV GRN +FL+
Sbjct: 95 ---KARWIAQDLKVKQTVLDTSVIKAITHNALMDPNAPISQKDNELPNTFVDGRNALFLL 151
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
+AA A GI I GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K
Sbjct: 152 YAAIYAKSQGIRVIYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYPFEIRTPLMWLDK 211
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
ETW LA +G D + +HTCY G GC CP+C LR++G
Sbjct: 212 KETWALADQLGAFDYIR---RHTHTCYNGVEG-------GCGECPSCVLRERG 254
>gi|332288621|ref|YP_004419473.1| queuosine biosynthesis protein QueC [Gallibacterium anatis UMN179]
gi|330431517|gb|AEC16576.1| queuosine biosynthesis protein QueC [Gallibacterium anatis UMN179]
Length = 224
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 139/229 (60%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
A+++FSGGQDS+TCL AL + VE ++F YGQR+ +EL+ +W
Sbjct: 6 AIVIFSGGQDSTTCLLQALQTYGNGNVEAITFHYGQRHSIELD------------KSRWI 53
Query: 68 KDSLG-EDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ LG + IL L+++ I+H++L N ++ + LPNTFV GRN +FL++AA A
Sbjct: 54 ANDLGVKQTILDLSLMQSITHNALMDNNETIQQKQGELPNTFVDGRNALFLLYAAIYAKG 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI++I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW LA
Sbjct: 114 QGISDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYSFNIITPLMWLTKKETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G + +++ +HTCY G GC+ CP+C LR+KG E+
Sbjct: 174 QLG---RLEYVMQHTHTCYEGVEG-------GCHHCPSCLLREKGLNEY 212
>gi|327392988|dbj|BAK10410.1| protein YbaX [Pantoea ananatis AJ13355]
Length = 231
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 136/224 (60%), Gaps = 22/224 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLVQALQHYDEVHCVTFDYGQRHREEIDVARDLSLKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ A + + LP+TFVPGRNI+FL A+ AY++
Sbjct: 60 -----VLDVTMLNELAVSSLTRDSIPVPAYDPEASGLPSTFVPGRNILFLTLASVYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR + ++A+ AI LGM V TPLMWL K ETW LA D
Sbjct: 115 EAEAVITGVCETDFSGYPDCRDEFVKALNHAIGLGMARDVRFETPLMWLNKAETWALA-D 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
Q + LI EE+ TCY G + G GC C AC+LR G
Sbjct: 174 YWQQ--LTLIREETLTCYNGIK------GDGCGECAACHLRSNG 209
>gi|227328854|ref|ZP_03832878.1| queuosine biosynthesis protein QueC [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 231
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 137/229 (59%), Gaps = 22/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + +K+ K
Sbjct: 4 AVVVFSGGQDSTTCLVQALQDYDDVHCITFDYGQRHRAEIDVARELSQKLGATAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ + + D N +PNTFVPGRNI+FL A+ AY++
Sbjct: 60 -----VLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW LA
Sbjct: 115 GAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALADY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D V + TCY G + G GC C AC+LR G +++
Sbjct: 175 YQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQ 214
>gi|261341045|ref|ZP_05968903.1| ExsB protein [Enterobacter cancerogenus ATCC 35316]
gi|288316911|gb|EFC55849.1| ExsB protein [Enterobacter cancerogenus ATCC 35316]
Length = 231
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 137/229 (59%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ + L +
Sbjct: 4 AVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDV---ARELALNLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL A AY+
Sbjct: 57 --AHKVLDVNLLNELAVSSLTRD-SIPVPDYEPDASGIPNTFVPGRNILFLTLTAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM TPLMWL K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKETRFETPLMWLDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G DLV E+ TCY G + G GC C AC LR G +
Sbjct: 174 YWGKLDLVR---SETLTCYNGIK------GDGCGQCAACNLRANGLNHY 213
>gi|313668995|ref|YP_004049279.1| queuosine biosynthesis protein QueC [Neisseria lactamica ST-640]
gi|313006457|emb|CBN87920.1| queuosine biosynthesis protein QueC (ec 3.5.-.-) [Neisseria
lactamica 020-06]
Length = 219
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 140/230 (60%), Gaps = 23/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++FSGGQDS+TCL A+ + R V ++F YGQR+ VELE + + + +P+
Sbjct: 6 ALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG--VPQT- 62
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ L ++ I+H++L A ++ N +PNTFV GRN +FL++AA A G
Sbjct: 63 -------LVDLNLMKTITHNALMDEAASIETAGNGVPNTFVDGRNALFLLYAAIYAKGQG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA ++
Sbjct: 116 IRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALADEM 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G D + E++HTCY G GC+ CP+C LR++G E+ E
Sbjct: 176 GALDYIR---EQTHTCYNGIVG-------GCHECPSCILRERGLAEYLES 215
>gi|242240286|ref|YP_002988467.1| exsB protein [Dickeya dadantii Ech703]
gi|242132343|gb|ACS86645.1| exsB protein [Dickeya dadantii Ech703]
Length = 231
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 140/230 (60%), Gaps = 22/230 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + +++ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDAAAELTQRLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
IL + +L ++ SSLT++ + + D LP+TFVPGRNI+FL A+ AY++
Sbjct: 60 -----ILNVELLNQLAVSSLTRDSIPVPEYDETSEGLPSTFVPGRNILFLTLASIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR + ++A+ A++LG+ + TPLMWL K ETW LA
Sbjct: 115 GAESVITGVCETDFSGYPDCRDEFVKALNQAVSLGLAREIRFVTPLMWLNKAETWALADY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
D V + TCY G + G GC C AC+LR +G ++++
Sbjct: 175 YHQLDTVK---HHTLTCYNGIK------GEGCGQCAACHLRAQGLTQYQQ 215
>gi|261346357|ref|ZP_05974001.1| ExsB protein [Providencia rustigianii DSM 4541]
gi|282565671|gb|EFB71206.1| ExsB protein [Providencia rustigianii DSM 4541]
Length = 231
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 141/225 (62%), Gaps = 23/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E +K ++L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALKHYDEVHCITFDYGQRHRLEIEV---AQKLSLQLGAKAHK- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + + + + LP+TFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLSELAISSLTRDNIPVPDFKESEASGLPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++++ A++LG+ + TPLMWL K +TW LA
Sbjct: 115 VQAEAVITGVCETDFSGYPDCRDEFVKSLNHAVSLGLAKDIRFETPLMWLDKAQTWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
G + I +++ TCY G + G GC C AC+LR KG
Sbjct: 175 HYGH---LETIRQQTLTCYNGIQ------GDGCGECAACHLRSKG 210
>gi|33151752|ref|NP_873105.1| hypothetical protein HD0558 [Haemophilus ducreyi 35000HP]
gi|81423753|sp|Q7VNH6|QUEC_HAEDU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33147973|gb|AAP95494.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 224
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 137/232 (59%), Gaps = 27/232 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELM 64
++ A+++FSGGQDS+TCL A+ F R VE ++F YGQR+ +ELE
Sbjct: 6 RSHKAIVIFSGGQDSTTCLFQAIQEFKRENVEVITFQYGQRHSIELE------------K 53
Query: 65 PKW-KDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
W +LG + ++ +++ I+ ++L +K QD + PNTFV GRN +FL++ A
Sbjct: 54 AAWIAQNLGIKQTVIDTSVIKAITTNALITEATIK-QDGDKPNTFVDGRNALFLLYTAIY 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI I GVCETD+SGYPDCR I+++ +NL M+ + + TPLM+L K +TW
Sbjct: 113 AKGQGIQTIFTGVCETDFSGYPDCRDIFIKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LA +G + V E +HTCYLG GC++CP+C LR+KG E+
Sbjct: 173 LADQLGAFEYVR---EHTHTCYLGVEG-------GCHTCPSCLLREKGLNEY 214
>gi|254361904|ref|ZP_04978037.1| PP-loop superfamily ATPase [Mannheimia haemolytica PHL213]
gi|261492300|ref|ZP_05988862.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495369|ref|ZP_05991818.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153093445|gb|EDN74433.1| PP-loop superfamily ATPase [Mannheimia haemolytica PHL213]
gi|261308972|gb|EEY10226.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311983|gb|EEY13124.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 222
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 137/235 (58%), Gaps = 26/235 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ + P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE
Sbjct: 1 MTHQKPKAVVIFSGGQDSTTCLFQAIAEFGKENVEVVTFQYGQRHSIELE---------- 50
Query: 62 ELMPKW-KDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+W + LG + ++ +++ I+ ++L N A Q + PNTFV GRN +FL++
Sbjct: 51 --KARWISNDLGVKQTLIDTSVIKAITTNALMDNNAEIQQQGSTPNTFVDGRNALFLLYT 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K E
Sbjct: 109 AIYAKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
TW LA +G D I + +HTCYLG GC+ CP+C LR+KG E+
Sbjct: 169 TWALADKLGAFD---YIRDHTHTCYLGVEG-------GCHDCPSCVLREKGLNEY 213
>gi|291616556|ref|YP_003519298.1| YbaX [Pantoea ananatis LMG 20103]
gi|291151586|gb|ADD76170.1| YbaX [Pantoea ananatis LMG 20103]
Length = 255
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 136/224 (60%), Gaps = 22/224 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + K+ K
Sbjct: 28 AVVVFSGGQDSTTCLVQALQHYDEVHCVTFDYGQRHREEIDVARDLSLKLGARAHK---- 83
Query: 71 LGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ A + + LP+TFVPGRNI+FL A+ AY++
Sbjct: 84 -----VLDVTMLNELAVSSLTRDSIPVPAYDPKASGLPSTFVPGRNILFLTLASVYAYQV 138
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR + ++A+ AI LGM V TPLMWL K ETW LA D
Sbjct: 139 EAEAVITGVCETDFSGYPDCRDEFVKALNHAIGLGMARDVRFETPLMWLNKAETWALA-D 197
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
Q + LI EE+ TCY G + G GC C AC+LR G
Sbjct: 198 YWQQ--LTLIREETLTCYNGIK------GDGCGECAACHLRSNG 233
>gi|241759321|ref|ZP_04757427.1| ExsB protein [Neisseria flavescens SK114]
gi|241320457|gb|EER56754.1| ExsB protein [Neisseria flavescens SK114]
Length = 219
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 140/233 (60%), Gaps = 27/233 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ +ELE +W
Sbjct: 5 QALVIFSGGQDSTTCLIQAIQTYGCENVQAITFQYGQRHAIELE------------QARW 52
Query: 68 --KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+D + +L L+++ I+H++L + A ++ + LPNTFV GRN +FL++AA A
Sbjct: 53 IAQDLGVKQTVLDLSLMQQITHNALMDDTAYIETAPDGLPNTFVDGRNALFLLYAAIYAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
I +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW LA
Sbjct: 113 GQRIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G D I E +HTCY G GC+ CP+C LR++G E+ E
Sbjct: 173 DEMGALD---YICEHTHTCYNGVVG-------GCHECPSCILRERGLSEYLES 215
>gi|325298550|ref|YP_004258467.1| exsB protein [Bacteroides salanitronis DSM 18170]
gi|324318103|gb|ADY35994.1| exsB protein [Bacteroides salanitronis DSM 18170]
Length = 222
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 136/233 (58%), Gaps = 24/233 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA F V L+F YGQ++ E++ R RK V
Sbjct: 6 ALVVFSGGQDSTTCLFWAKKHFKEVYALTFLYGQKHVKEVDLAREIARKAEVHF------ 59
Query: 70 SLGEDHILPLAILGDISHSSLTK-NVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ ++ +G + +SLT ++ M + + N PNTFVPGRN+ FL AA A
Sbjct: 60 -----DVMDVSFIGHLGKNSLTDLSIPMDEEKPEGNYPNTFVPGRNLFFLSIAAVYARER 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI+++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA +
Sbjct: 115 GISHLVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALADE 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G D+V ++ TCY G G GC CPAC LR++G ++ E Q
Sbjct: 175 LGAFDIVR---NDTLTCYNGIP------GDGCGHCPACKLRREGLEKYLENKQ 218
>gi|283784270|ref|YP_003364135.1| queuosine biosynthesis protein [Citrobacter rodentium ICC168]
gi|282947724|emb|CBG87279.1| queuosine biosynthesis protein [Citrobacter rodentium ICC168]
Length = 231
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 139/225 (61%), Gaps = 24/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLVQALHQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVTLLSELAVSSLTRD-NIPVPDYEPDADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+ LGM + TPLMWL K ETW LA
Sbjct: 114 VKAQAVITGVCETDFSGYPDCRDEFVKALNHAVTLGMAKEIRFETPLMWLDKAETWALA- 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D G+ + + EE+ TCY G + G GC C AC LR G
Sbjct: 173 DYWGE--LERVREETLTCYNGIK------GDGCGQCAACNLRANG 209
>gi|146387132|pdb|2PG3|A Chain A, Crystal Structure Of Hypothetical Protein (Yp_049261.1)
From Erwinia Carotovora Subsp. Atroseptica Scri1043 At
2.40 A Resolution
Length = 232
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 137/230 (59%), Gaps = 22/230 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E+E + +K+ K
Sbjct: 5 AVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHK---- 60
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ + + D N +PNTFVPGRNI+FL A+ AY++
Sbjct: 61 -----VLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQV 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPL WL K ETW LA
Sbjct: 116 GAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLXWLNKAETWALADY 175
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
D V + TCY G + G GC C AC+LR G ++++
Sbjct: 176 YQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQK 216
>gi|94676652|ref|YP_588712.1| exsB protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|110816212|sp|Q1LTK2|QUEC_BAUCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|94219802|gb|ABF13961.1| exsB protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 238
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 144/241 (59%), Gaps = 26/241 (10%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N IKK +++FSGGQDS+TCL AL ++D+V ++FDYGQR++ E+ C+ +++
Sbjct: 4 NQQIKKT---VVVFSGGQDSTTCLIQALTQYDQVYCITFDYGQRHRAEI----CIARRLT 56
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPN----TFVPGRNIIFL 116
+ + + I+ + L ++ SSLT+ N+ + + + N N TFVPGRNI+FL
Sbjct: 57 ITLGAY-----DHQIIDTSALNVLAASSLTRENIIVPLAEKNHMNSSLSTFVPGRNIVFL 111
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
AA AY++ I+ GVCETD+SGYPDCR I+A+ A+NLGM ++ +PLMWL
Sbjct: 112 TLAAIYAYQVKAEVIITGVCETDFSGYPDCREKFIQALNKAVNLGMAYNIHFISPLMWLN 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K ETW LA DLV E+ TCY G + K GC C +C LR +G +K+
Sbjct: 172 KAETWALADYYQKLDLV---CNETLTCYNGIQGK------GCGFCTSCSLRARGLETYKQ 222
Query: 237 K 237
+
Sbjct: 223 Q 223
>gi|190150422|ref|YP_001968947.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307263765|ref|ZP_07545371.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|254764292|sp|B3H1X8|QUEC_ACTP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189915553|gb|ACE61805.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306870886|gb|EFN02624.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 222
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 137/234 (58%), Gaps = 27/234 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE
Sbjct: 1 MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELE----------- 49
Query: 63 LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
W KD + ++ +++ I+ +++ + +K Q+ N PNTFV GRN +FL++ A
Sbjct: 50 -KAAWIAKDLGVKQTLIDTSVIKAITSNAMMEEREIK-QEGNTPNTFVDGRNALFLLYTA 107
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K +T
Sbjct: 108 IYAKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQT 167
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W LA +G D I + +HTCYLG GC++CP+C LR+KG E+
Sbjct: 168 WALADKLGAFD---YIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEY 211
>gi|32035296|ref|ZP_00135303.1| COG0603: Predicted PP-loop superfamily ATPase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|303250158|ref|ZP_07336360.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307246013|ref|ZP_07528095.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307259430|ref|ZP_07541155.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|302651221|gb|EFL81375.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306852948|gb|EFM85171.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306866366|gb|EFM98229.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 222
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 137/234 (58%), Gaps = 27/234 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE
Sbjct: 1 MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELE----------- 49
Query: 63 LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
W KD + ++ +++ I+ +++ + +K Q+ N PNTFV GRN +FL++ A
Sbjct: 50 -KAAWIAKDLGVKQTLIDTSVIKAITSNAMMEEREIK-QEGNTPNTFVDGRNALFLLYTA 107
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K +T
Sbjct: 108 IYAKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQT 167
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W LA +G D I + +HTCYLG GC++CP+C LR+KG E+
Sbjct: 168 WALADKLGAFD---YIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEY 211
>gi|22124941|ref|NP_668364.1| queuosine biosynthesis protein QueC [Yersinia pestis KIM 10]
gi|45440630|ref|NP_992169.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Microtus str. 91001]
gi|51595316|ref|YP_069507.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis IP
32953]
gi|108808636|ref|YP_652552.1| queuosine biosynthesis protein QueC [Yersinia pestis Antiqua]
gi|108811105|ref|YP_646872.1| queuosine biosynthesis protein QueC [Yersinia pestis Nepal516]
gi|145600044|ref|YP_001164120.1| queuosine biosynthesis protein QueC [Yersinia pestis Pestoides F]
gi|149365004|ref|ZP_01887039.1| queuosine biosynthesis protein queC [Yersinia pestis CA88-4125]
gi|153948926|ref|YP_001402045.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis IP
31758]
gi|162419001|ref|YP_001607412.1| queuosine biosynthesis protein QueC [Yersinia pestis Angola]
gi|165926543|ref|ZP_02222375.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936090|ref|ZP_02224660.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011014|ref|ZP_02231912.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213075|ref|ZP_02239110.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167398760|ref|ZP_02304284.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167421566|ref|ZP_02313319.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167423798|ref|ZP_02315551.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468479|ref|ZP_02333183.1| queuosine biosynthesis protein QueC [Yersinia pestis FV-1]
gi|170025444|ref|YP_001721949.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis
YPIII]
gi|186894333|ref|YP_001871445.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis
PB1/+]
gi|218930180|ref|YP_002348055.1| queuosine biosynthesis protein QueC [Yersinia pestis CO92]
gi|229838753|ref|ZP_04458912.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229896093|ref|ZP_04511263.1| enzyme in preQ0 biosynthesis [Yersinia pestis Pestoides A]
gi|229899321|ref|ZP_04514464.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
str. India 195]
gi|229901335|ref|ZP_04516457.1| enzyme in preQ0 biosynthesis [Yersinia pestis Nepal516]
gi|270489520|ref|ZP_06206594.1| protein ExsB [Yersinia pestis KIM D27]
gi|294504882|ref|YP_003568944.1| hypothetical protein YPZ3_2772 [Yersinia pestis Z176003]
gi|81593863|sp|Q8ZC72|QUEC_YERPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81640198|sp|Q66DS7|QUEC_YERPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118574294|sp|Q1C4L5|QUEC_YERPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118574295|sp|Q1CL58|QUEC_YERPN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016457|sp|A7FLB7|QUEC_YERP3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016458|sp|A4TPD5|QUEC_YERPP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764395|sp|B2K6W4|QUEC_YERPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764396|sp|A9QZP5|QUEC_YERPG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764397|sp|B1JHR4|QUEC_YERPY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21957781|gb|AAM84615.1|AE013707_3 hypothetical protein y1034 [Yersinia pestis KIM 10]
gi|45435487|gb|AAS61046.1| Predicted ATPase (PP-loop superfamily), confers aluminum resistance
[Yersinia pestis biovar Microtus str. 91001]
gi|51588598|emb|CAH20206.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108774753|gb|ABG17272.1| hypothetical protein YPN_0940 [Yersinia pestis Nepal516]
gi|108780549|gb|ABG14607.1| hypothetical protein YPA_2645 [Yersinia pestis Antiqua]
gi|115348791|emb|CAL21745.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145211740|gb|ABP41147.1| hypothetical protein YPDSF_2785 [Yersinia pestis Pestoides F]
gi|149291417|gb|EDM41491.1| queuosine biosynthesis protein queC [Yersinia pestis CA88-4125]
gi|152960421|gb|ABS47882.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis IP
31758]
gi|162351816|gb|ABX85764.1| queuosine biosynthesis protein QueC [Yersinia pestis Angola]
gi|165916235|gb|EDR34842.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921471|gb|EDR38668.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990014|gb|EDR42315.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205862|gb|EDR50342.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166960485|gb|EDR56506.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051264|gb|EDR62672.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167057968|gb|EDR67714.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751978|gb|ACA69496.1| exsB protein [Yersinia pseudotuberculosis YPIII]
gi|186697359|gb|ACC87988.1| exsB protein [Yersinia pseudotuberculosis PB1/+]
gi|229681264|gb|EEO77358.1| enzyme in preQ0 biosynthesis [Yersinia pestis Nepal516]
gi|229687723|gb|EEO79796.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695119|gb|EEO85166.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229701016|gb|EEO89045.1| enzyme in preQ0 biosynthesis [Yersinia pestis Pestoides A]
gi|262362947|gb|ACY59668.1| hypothetical protein YPD4_2761 [Yersinia pestis D106004]
gi|262366867|gb|ACY63424.1| hypothetical protein YPD8_2751 [Yersinia pestis D182038]
gi|270338024|gb|EFA48801.1| protein ExsB [Yersinia pestis KIM D27]
gi|294355341|gb|ADE65682.1| hypothetical protein YPZ3_2772 [Yersinia pestis Z176003]
gi|320016335|gb|ADV99906.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 232
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 142/234 (60%), Gaps = 23/234 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRTEIDV---ARELALQLGAT---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN----LPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D N LP+TFVPGRNI+FL A+ AY+
Sbjct: 57 --AHKVLDVGMLNELAVSSLTRDSIPVPSYDANADGALPSTFVPGRNILFLTLASIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + I+A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 115 VQAQAVITGVCETDFSGYPDCRDEFIKALNHAIDLGIGRDIAFITPLMWLDKAETWALA- 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D Q ++LI + TCY G + G GC C AC+LR KG + Q
Sbjct: 174 DYYQQ--LDLIRHHTLTCYNGIK------GDGCGQCAACHLRAKGLASYMANKQ 219
>gi|301156476|emb|CBW15947.1| predicted aluminum resistance protein [Haemophilus parainfluenzae
T3T1]
Length = 225
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 137/229 (59%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ + + VET++F YGQR+ +ELE +W
Sbjct: 12 ALVIFSGGQDSTTCLIQAIAEYGVENVETVTFQYGQRHAIELE------------KARWI 59
Query: 68 -KDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + ++ +++ I+H++L N ++ +D LPNTFV GRN +FL++AA A
Sbjct: 60 AQDLGVKQTLIDTSVIKSITHNALMDVNADIEQKDGELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW LA
Sbjct: 120 QGINDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPFNLKTPLMYLTKAQTWSLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D I + +HTCY G GC CP+C LR KG E+
Sbjct: 180 ELGALD---YIRQHTHTCYEGVEG-------GCGECPSCKLRDKGLQEY 218
>gi|238788015|ref|ZP_04631811.1| Queuosine biosynthesis protein queC [Yersinia frederiksenii ATCC
33641]
gi|238723963|gb|EEQ15607.1| Queuosine biosynthesis protein queC [Yersinia frederiksenii ATCC
33641]
Length = 232
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 142/229 (62%), Gaps = 23/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ RK +L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDI---ARKLAAKLGVKAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN----LPNTFVPGRNIIFLVFAATLAYR 125
+L +++L +++ SSLT++ + + D + +P+TFVPGRNI+FL A+ AY+
Sbjct: 59 ----KVLDVSMLNELAVSSLTRDSIPVPTYDEDEKDAVPSTFVPGRNILFLTLASIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 115 VQAQTVITGVCETDFSGYPDCRDEFVKALNNAIDLGIGRDIAFSTPLMWLDKAETWALA- 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D Q + L+ ++ TCY G + G GC C AC+LR KG +
Sbjct: 174 DYYQQ--LELVRHDTLTCYNGIQ------GDGCGQCAACHLRAKGLESY 214
>gi|212709204|ref|ZP_03317332.1| hypothetical protein PROVALCAL_00237 [Providencia alcalifaciens DSM
30120]
gi|212688116|gb|EEB47644.1| hypothetical protein PROVALCAL_00237 [Providencia alcalifaciens DSM
30120]
Length = 233
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 141/225 (62%), Gaps = 23/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E +K ++L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALKDYDEVHCVTFDYGQRHRLEIEV---AQKLSLQLGAKAHK- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L +++L +++ SSLT+ N+ + + + + LP+TFVPGRNI+FL +A AY+
Sbjct: 60 -----VLDVSLLNELAISSLTRDNIPVPDYEESEASGLPSTFVPGRNILFLTLSAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+NLG+ + TPLMWL K +TW LA
Sbjct: 115 VNAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGLAKDIRFETPLMWLDKAQTWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
G + I ++ TCY G + G GC C AC+LR KG
Sbjct: 175 YYGH---LETIRTQTLTCYNGIQ------GDGCAECAACHLRSKG 210
>gi|238919018|ref|YP_002932532.1| queuosine biosynthesis protein QueC [Edwardsiella ictaluri 93-146]
gi|259551526|sp|C5BCK3|QUEC_EDWI9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|238868586|gb|ACR68297.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 229
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 138/228 (60%), Gaps = 24/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E +++ +
Sbjct: 4 AVVVFSGGQDSTTCLIQALHHYDDVHCITFDYGQRHRAE-----------IDVARRLAGQ 52
Query: 71 LGED--HILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG +L + +L +++ SSLT+ N+ + Q ++ +PNTFVPGRN++FL AA AY++
Sbjct: 53 LGASAHKVLDVGLLNELAISSLTRDNIPVPTQSEDGIPNTFVPGRNVLFLTLAAIYAYQV 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR ++A+ A+ LGM + TPLMWL K ETW LA D
Sbjct: 113 EAEAVITGVCETDFSGYPDCRDQFVQALNHAVCLGMARDIRFETPLMWLNKAETWALA-D 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GQ + + ++ TCY G + G GC C AC+LR G ++
Sbjct: 172 YYGQ--LARVRHDTLTCYNGVQ------GDGCGHCAACHLRAHGLQQY 211
>gi|126208569|ref|YP_001053794.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae L20]
gi|189038888|sp|A3N1A3|QUEC_ACTP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|126097361|gb|ABN74189.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 222
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 137/234 (58%), Gaps = 27/234 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE
Sbjct: 1 MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELE----------- 49
Query: 63 LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
W KD + ++ +++ I+ +++ + +K Q+ N PNTFV GRN +FL++ A
Sbjct: 50 -KAAWIAKDLGVKQTLIDTSVIKAITSNAMMEEHEIK-QEGNTPNTFVDGRNALFLLYTA 107
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K +T
Sbjct: 108 IYAKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQT 167
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W LA +G D I + +HTCYLG GC++CP+C LR+KG E+
Sbjct: 168 WALADKLGAFD---YIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEY 211
>gi|295096770|emb|CBK85860.1| preQ(0) biosynthesis protein QueC [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 231
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 137/225 (60%), Gaps = 24/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL A AY+
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPDASGIPNTFVPGRNILFLTLTAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LGM TPLMWL K ETW LA
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVDLGMAKETRFETPLMWLDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
G D+V E+ TCY G + G GC C AC LR G
Sbjct: 174 YWGKLDVVR---NETLTCYNGIK------GDGCGQCAACNLRANG 209
>gi|290474656|ref|YP_003467536.1| putative (aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Xenorhabdus bovienii SS-2004]
gi|289173969|emb|CBJ80756.1| putative (aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Xenorhabdus bovienii SS-2004]
Length = 232
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 138/225 (61%), Gaps = 23/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K++ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALRQYDEVHCVTFDYGQRHRAEIDVACRISKELGAAAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + + + + LPNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLSELAISSLTRDNIPVPDFSESEKSGLPNTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+ LG+ + TPLMWL K ETW LA
Sbjct: 115 VEAEAVITGVCETDFSGYPDCRDEFVKALNKAVCLGIARDIRFETPLMWLNKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+N + ++ TCY G + G GC+ C AC+LR G
Sbjct: 175 YY---QKLNFVRTQTLTCYNGIQ------GDGCSECAACHLRANG 210
>gi|253687450|ref|YP_003016640.1| exsB protein [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259551546|sp|C6DB62|QUEC_PECCP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|251754028|gb|ACT12104.1| exsB protein [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 231
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 136/229 (59%), Gaps = 22/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQHYDDVHCITFDYGQRHRAEIDIARELSLKLGATAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ + + D N +PNTFVPGRNI+FL A+ AY++
Sbjct: 60 -----VLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW LA
Sbjct: 115 GAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALADY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D V + TCY G + G GC C AC+LR G +++
Sbjct: 175 YQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQ 214
>gi|167856371|ref|ZP_02479098.1| queuosine biosynthesis protein QueC [Haemophilus parasuis 29755]
gi|167852509|gb|EDS23796.1| queuosine biosynthesis protein QueC [Haemophilus parasuis 29755]
Length = 219
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 136/237 (57%), Gaps = 26/237 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K P A ++FSGGQDS+TCL A+ F + VE ++F YGQR+ +EL+
Sbjct: 1 MKPTPKAAVIFSGGQDSTTCLFLAIKEFGKENVEAVTFQYGQRHAIELD----------- 49
Query: 63 LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+W +D + ++ +++ I+ ++L + A Q N PNTFV GRN +FL++ A
Sbjct: 50 -KARWIAQDLGVKQTLIDTSVIKAITANALMDDQAEIKQTGNTPNTFVDGRNALFLLYTA 108
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+S YPDCR I+++ +NL M+ + + TPLM+L K ET
Sbjct: 109 IYAKSQGIQTIYTGVCETDFSSYPDCRDVFIKSMNVTLNLAMDYNFNIRTPLMYLTKKET 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
W LA +G D + +HTCYLG GC++CP+C LR+KG E+ E+
Sbjct: 169 WALADQLGAFDYIR---THTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLEE 215
>gi|260914428|ref|ZP_05920897.1| transcription regulator ExsB [Pasteurella dagmatis ATCC 43325]
gi|260631529|gb|EEX49711.1| transcription regulator ExsB [Pasteurella dagmatis ATCC 43325]
Length = 224
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 133/228 (58%), Gaps = 26/228 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE +W
Sbjct: 12 AVVIFSGGQDSTTCLIQAIQEYGAENVEAVTFQYGQRHAIELE------------KAQWI 59
Query: 68 KDSLGEDHIL-PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG IL +++ I+ ++L A Q + PNTFV GRN +FL++AA A
Sbjct: 60 AKDLGVKQILIDTSVIKAITQNALMDKNATIEQQGSTPNTFVDGRNALFLLYAAIYAKGQ 119
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K TW+LA +
Sbjct: 120 GITDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYSFNIKTPLMYLTKAHTWQLADE 179
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D I + +HTCY+G GC CP+C LR+ G E+
Sbjct: 180 LGALD---YIRQHTHTCYMGVEK-------GCGECPSCILRENGLTEY 217
>gi|238759255|ref|ZP_04620422.1| Queuosine biosynthesis protein queC [Yersinia aldovae ATCC 35236]
gi|238702542|gb|EEP95092.1| Queuosine biosynthesis protein queC [Yersinia aldovae ATCC 35236]
Length = 232
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 138/229 (60%), Gaps = 23/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ RK ++L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDV---ARKLAIQLGAKAHK- 59
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + + D +++P+TFVPGRNI+FL A AY+
Sbjct: 60 -----VLDVGMLNELAVSSLTRDSIPVPTFDEEDEDSVPSTFVPGRNILFLTLTAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR ++A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 115 VQAEAVITGVCETDFSGYPDCRDKFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
DLV + TCY G + G GC C AC+LR KG +
Sbjct: 175 YYQQLDLVR---HHTLTCYNGIQ------GEGCGQCAACHLRAKGLSHY 214
>gi|165976518|ref|YP_001652111.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303253331|ref|ZP_07339480.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|189038889|sp|B0BQ32|QUEC_ACTPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|165876619|gb|ABY69667.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302648013|gb|EFL78220.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
Length = 222
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 136/234 (58%), Gaps = 27/234 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P A+++FSGGQDS+TCL A+ F VE ++F YGQR+ +ELE
Sbjct: 1 MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVKNVEVVTFQYGQRHAIELE----------- 49
Query: 63 LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
W KD + ++ +++ I+ +++ + +K Q+ N PNTFV GRN +FL++ A
Sbjct: 50 -KAAWIAKDLGVKQTLIDTSVIKAITSNAMMEEREIK-QEGNTPNTFVDGRNALFLLYTA 107
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K +T
Sbjct: 108 IYAKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQT 167
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W LA +G D I + +HTCYLG GC++CP+C LR+KG E+
Sbjct: 168 WALADKLGAFD---YIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEY 211
>gi|238764853|ref|ZP_04625794.1| Queuosine biosynthesis protein queC [Yersinia kristensenii ATCC
33638]
gi|238696960|gb|EEP89736.1| Queuosine biosynthesis protein queC [Yersinia kristensenii ATCC
33638]
Length = 232
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R ++L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCMTFDYGQRHRAEIDV---ARDLAIQLGAKAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKN-----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + ++LP+TFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVTMLNELAVSSLTRDSIPVPTYNEGDGDSLPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 115 VQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V ++ TCY G + G GC+ C AC+LR KG +EF
Sbjct: 175 YYQQLDRVR---HDTLTCYNGIQ------GDGCDQCAACHLRAKG-LEF 213
>gi|261867499|ref|YP_003255421.1| ExsB protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412831|gb|ACX82202.1| ExsB protein [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 234
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 130/225 (57%), Gaps = 27/225 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
AL++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE +W
Sbjct: 8 ALVIFSGGQDSTTCLFLAMQEFGAENVEVITFQYGQRHVIELE------------KARWI 55
Query: 68 -KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+D + +L +++ I+H++L N + +DN LPNTFV GRN +FL++AA A
Sbjct: 56 AQDLKVKQTVLDTSVIKAITHNALMDPNAPISQKDNELPNTFVDGRNALFLLYAAIYAKS 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI I GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 116 QGIRVIYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMAYPFEIRTPLMWLDKKETWALAD 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G D I +HTCY G GC CP+C LR++G
Sbjct: 176 QLGAFD---YIRRHTHTCYNGVEG-------GCGECPSCVLRERG 210
>gi|260596821|ref|YP_003209392.1| queuosine biosynthesis protein QueC [Cronobacter turicensis z3032]
gi|260215998|emb|CBA28662.1| Queuosine biosynthesis protein queC [Cronobacter turicensis z3032]
Length = 231
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 22/229 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ V
Sbjct: 4 AVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEID---------VASALAASLG 54
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ + + D N LP+TFVPGRNI+FL A+ AY++
Sbjct: 55 ARAHKVLDVTLLNELAVSSLTRDSIPVPDYDPNAEGLPSTFVPGRNILFLTLASIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR + ++A+ A+ LGM V TPLMWL K ETW LA
Sbjct: 115 QAEAVITGVCETDFSGYPDCRDEFVKALNHAVALGMARDVRFETPLMWLNKAETWALADY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
G D++ +++ TCY G + G GC C AC+LR G +++
Sbjct: 175 WGKLDVIR---QQTLTCYNGIQ------GDGCGECAACHLRANGLSQYQ 214
>gi|253990884|ref|YP_003042240.1| queuosine biosynthesis protein QueC [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253782334|emb|CAQ85498.1| Queuosine biosynthesis protein queC [Photorhabdus asymbiotica]
Length = 232
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 139/230 (60%), Gaps = 25/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL A++++D V ++FDYGQR+ E++ + + + + K
Sbjct: 4 AVVVFSGGQDSTTCLIQAINQYDEVHCITFDYGQRHCAEIDVARNISRSLGVVAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT+N + I + N +PNTFVPGRNI+FL AA AY
Sbjct: 60 -----VLDITLLNELALSSLTRN-NIPIPNYNESEKSTIPNTFVPGRNILFLTLAAIYAY 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LG+ + TPLMWL K ETW L+
Sbjct: 114 QVEAETVITGVCETDFSGYPDCRDEFVKAMNKAVSLGIARDIRFETPLMWLNKAETWALS 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V ++ TCY G + G GC +C AC+LR G ++
Sbjct: 174 DYYQHLDFVR---SQTLTCYNGIQ------GNGCGTCAACHLRTSGLEQY 214
>gi|332160756|ref|YP_004297333.1| queuosine biosynthesis protein QueC [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604637|emb|CBY26135.1| queuosine Biosynthesis QueC ATPase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664986|gb|ADZ41630.1| queuosine biosynthesis protein QueC [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859941|emb|CBX70270.1| queuosine biosynthesis protein queC [Yersinia enterocolitica
W22703]
Length = 232
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 146/229 (63%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDV---ARELAIQLGAK---- 56
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + + ++++P+TFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLEVGMLNELAVSSLTRDNIPVPSYSEEGEDSIPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 115 VQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALA- 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D Q ++ I ++ TCY G + G GC C AC+LR KG +EF
Sbjct: 174 DYYQQ--LDRIRHDTLTCYNGIQ------GDGCGKCAACHLRAKG-LEF 213
>gi|123443335|ref|YP_001007309.1| queuosine biosynthesis protein QueC [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|167016456|sp|A1JNM3|QUEC_YERE8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|122090296|emb|CAL13162.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 232
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 146/229 (63%), Gaps = 24/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDV---ARELAIQLGAKAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + + ++++P+TFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVGMLNELAVSSLTRDNIPVPSYSEEGEDSIPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 115 VQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALA- 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D Q ++ I ++ TCY G + G GC C AC+LR KG +EF
Sbjct: 174 DYYQQ--LDRIRHDTLTCYNGIQ------GDGCGQCAACHLRAKG-LEF 213
>gi|270263577|ref|ZP_06191846.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
gi|270042461|gb|EFA15556.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
Length = 232
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 136/230 (59%), Gaps = 23/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + V L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIEVAQALS---VALGAKAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKN-----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ Q+ LP+TFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVGLLNELAISSLTRDSIPVPAYNNEQEGGLPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+ LG+ + TPLMWL K ETW LA
Sbjct: 115 VEAEAVITGVCETDFSGYPDCRDEFVKALNHAVVLGIARDIRFETPLMWLNKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D V +++ TCY G + G GC C AC+LR G +++
Sbjct: 175 YYQQLDRVR---QDTLTCYNGIQ------GDGCGECAACHLRANGLKQYQ 215
>gi|148826200|ref|YP_001290953.1| PP-loop superfamily ATPase [Haemophilus influenzae PittEE]
gi|229846222|ref|ZP_04466334.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
7P49H1]
gi|189038917|sp|A5UCR9|QUEC_HAEIE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148716360|gb|ABQ98570.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittEE]
gi|229811226|gb|EEP46943.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
7P49H1]
Length = 227
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 140/227 (61%), Gaps = 23/227 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE R + +L K
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEK---ARAIVQDLGIKQT 68
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A G
Sbjct: 69 -------LIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQG 121
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA ++
Sbjct: 122 IQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADEL 181
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G ++N + + +HTCY G GC CP+C LR KG ++
Sbjct: 182 G---VLNYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|308185915|ref|YP_003930046.1| Queuosine biosynthesis protein queC 2 [Pantoea vagans C9-1]
gi|308056425|gb|ADO08597.1| Queuosine biosynthesis protein queC 2 [Pantoea vagans C9-1]
Length = 231
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 138/224 (61%), Gaps = 22/224 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL A+ +D V ++FDYGQR++ E+E V + + ++
Sbjct: 4 AVVVFSGGQDSTTCLIQAVQLYDEVHCVTFDYGQRHREEIE----VARDLAMIL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ +L + +L +++ SSLT++ A + + LP TFVPGRNI+FL A+ AY++
Sbjct: 55 VRAHKVLDVTMLNELAVSSLTRDNIPVPAYNPEASGLPTTFVPGRNILFLTLASVYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR + ++A+ A++LGM V TPLMWL K ETW LA D
Sbjct: 115 EAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAREVRFETPLMWLNKAETWALA-D 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
Q + L+ E++ TCY G + G GC C AC+LR G
Sbjct: 174 YWQQ--LALVREQTLTCYNGVK------GDGCGECAACHLRANG 209
>gi|238751013|ref|ZP_04612509.1| Queuosine biosynthesis protein queC [Yersinia rohdei ATCC 43380]
gi|238710703|gb|EEQ02925.1| Queuosine biosynthesis protein queC [Yersinia rohdei ATCC 43380]
Length = 232
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 135/225 (60%), Gaps = 23/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR+ E+E R+ +L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHSAEIEV---ARQLATQLGVKAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + +N +PNTFVPGRNI+FL +A AY+
Sbjct: 59 ----KVLDVGMLNELAVSSLTRDSIPVPSYHEDDENAVPNTFVPGRNILFLTLSAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 115 VQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D V ++ TCY G + G GC C AC+LR KG
Sbjct: 175 YYQQLDRVR---HDTLTCYNGIQ------GDGCGQCAACHLRAKG 210
>gi|145631240|ref|ZP_01787013.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021]
gi|144983167|gb|EDJ90662.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021]
Length = 223
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 138/228 (60%), Gaps = 25/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKAFAIAQ---------- 61
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 62 -DLGIKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D V + +HTCY G GC CP+C LR KG ++
Sbjct: 181 LGVLDYVQ---KHTHTCYEGIEG-------GCKKCPSCILRNKGLKKY 218
>gi|315453291|ref|YP_004073561.1| putative queuosine biosynthesis protein [Helicobacter felis ATCC
49179]
gi|315132343|emb|CBY82971.1| Putative queuosine biosynthesis protein [Helicobacter felis ATCC
49179]
Length = 243
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 142/236 (60%), Gaps = 21/236 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K + +L FSGGQDS+T WA F++ L FDY Q++ +EL + +++EL K
Sbjct: 17 KTHTCVLCFSGGQDSTTLALWAKRVFEQTYLLGFDYDQKHAIELAQAHKI-ARMLELPYK 75
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAAT 121
+L L+ L +IS S+L + + + Q +LP++FVP RN +F+ A
Sbjct: 76 ---------VLDLSCLQEISTSALFAHTSHALNTPHPQAQDLPSSFVPDRNALFITLAHA 126
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM---ESHVTVHTPLMWLKKY 178
A+ LG +++GV DYSGY DCR + I +++T++NLG + + + PLM+ K
Sbjct: 127 YAFNLGAQAVLLGVSMQDYSGYFDCRQNFIESLQTSLNLGAFGKKEGINLLAPLMFSSKA 186
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ ++LA +GG + LILE +HTCY G R+ R+E+GYGC CPAC LRQ+G+M+F
Sbjct: 187 QEFQLAHALGG---LELILEHTHTCYEGVRESRHEFGYGCGVCPACQLRQQGYMKF 239
>gi|238795535|ref|ZP_04639050.1| Queuosine biosynthesis protein queC [Yersinia mollaretii ATCC
43969]
gi|238720654|gb|EEQ12455.1| Queuosine biosynthesis protein queC [Yersinia mollaretii ATCC
43969]
Length = 232
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 137/225 (60%), Gaps = 23/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ +L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDV---ARELATQLGAKAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + + + +P+TFVPGRNI+FL AA AY+
Sbjct: 59 ----KVLDVGMLNELAVSSLTRDNIPVPTYNEDDTDTVPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 115 VQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
DLV + TCY G + G GC C AC+LR KG
Sbjct: 175 YYQQLDLVR---NHTLTCYNGIQ------GDGCGECAACHLRAKG 210
>gi|240949104|ref|ZP_04753452.1| queuosine biosynthesis protein QueC [Actinobacillus minor NM305]
gi|240296499|gb|EER47131.1| queuosine biosynthesis protein QueC [Actinobacillus minor NM305]
Length = 221
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 138/234 (58%), Gaps = 26/234 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+++ A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE
Sbjct: 1 MQQPQKAIVIFSGGQDSTTCLFQAIAEFGKENVEVITFQYGQRHAIELE----------- 49
Query: 63 LMPKW-KDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+W LG + ++ +++ I+ ++L + A Q + PNTFV GRN +FL++AA
Sbjct: 50 -KAQWIAQDLGIKQTLIDTSLIKAITSNALMDDQAKIEQQGDKPNTFVDGRNALFLLYAA 108
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+ K ET
Sbjct: 109 IYAKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYFTKKET 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W+LA +G D + + +HTCYLG GC++CP+C LR+KG E+
Sbjct: 169 WRLADQLGAFDYIR---QHTHTCYLGVEG-------GCHTCPSCLLREKGLNEY 212
>gi|189039057|sp|A4W7B5|QUEC_ENT38 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 231
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 138/225 (61%), Gaps = 24/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 4 AVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL A AY+
Sbjct: 57 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPDADGIPNTFVPGRNILFLTLTAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 114 VKAEAIITGVCETDFSGYPDCRDEFVKALNHAVDLGMAKEIRFETPLMWLDKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ + L+ E+ TCY G + G GC C AC LR G
Sbjct: 174 ---YWEKLELVRTETLTCYNGIK------GDGCGQCAACNLRSNG 209
>gi|256839259|ref|ZP_05544769.1| queuosine biosynthesis protein queC [Parabacteroides sp. D13]
gi|256740178|gb|EEU53502.1| queuosine biosynthesis protein queC [Parabacteroides sp. D13]
Length = 236
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 142/242 (58%), Gaps = 26/242 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E V +KI
Sbjct: 13 MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIE----VARKIA--- 65
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAA 120
D+ +L ++++ + + N ++++ +++ PNTFVPGRN++FL FAA
Sbjct: 66 ---ADANVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 122
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA GI ++V GV E DYSGYPDCR +R++ +NL M+ +HTPLM K E
Sbjct: 123 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 182
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEK 237
W+L+ ++G DLV ++ TCY G GC CPAC LR+ G +++ KE+
Sbjct: 183 WELSDELGVFDLVRT---QTLTCYNGV------MAEGCGHCPACKLRKDGLEKYLKRKEE 233
Query: 238 YQ 239
Q
Sbjct: 234 NQ 235
>gi|262382273|ref|ZP_06075410.1| exsB protein [Bacteroides sp. 2_1_33B]
gi|262295151|gb|EEY83082.1| exsB protein [Bacteroides sp. 2_1_33B]
Length = 236
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 142/242 (58%), Gaps = 26/242 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E V +KI
Sbjct: 13 MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIE----VARKIA--- 65
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAA 120
D+ +L ++++ + + N ++++ +++ PNTFVPGRN++FL FAA
Sbjct: 66 ---ADADVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 122
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA GI ++V GV E DYSGYPDCR +R++ +NL M+ +HTPLM K E
Sbjct: 123 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 182
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEK 237
W+L+ ++G DLV ++ TCY G GC CPAC LR+ G +++ KE+
Sbjct: 183 WELSDELGVFDLVRT---QTLTCYNGV------MAEGCGHCPACKLRKDGLEKYLKRKEE 233
Query: 238 YQ 239
Q
Sbjct: 234 NQ 235
>gi|150010472|ref|YP_001305215.1| putative aluminum resistance protein [Parabacteroides distasonis
ATCC 8503]
gi|301311850|ref|ZP_07217772.1| ExsB protein [Bacteroides sp. 20_3]
gi|189038930|sp|A6LIS9|QUEC_PARD8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|149938896|gb|ABR45593.1| putative aluminum resistance protein [Parabacteroides distasonis
ATCC 8503]
gi|300829952|gb|EFK60600.1| ExsB protein [Bacteroides sp. 20_3]
Length = 224
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 142/242 (58%), Gaps = 26/242 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E V +KI
Sbjct: 1 MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIE----VARKIA--- 53
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAA 120
D+ +L ++++ + + N ++++ +++ PNTFVPGRN++FL FAA
Sbjct: 54 ---ADADVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA GI ++V GV E DYSGYPDCR +R++ +NL M+ +HTPLM K E
Sbjct: 111 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEK 237
W+L+ ++G DLV ++ TCY G GC CPAC LR+ G +++ KE+
Sbjct: 171 WELSDELGVFDLVRT---QTLTCYNGV------MAEGCGHCPACKLRKDGLEKYLKRKEE 221
Query: 238 YQ 239
Q
Sbjct: 222 NQ 223
>gi|145637056|ref|ZP_01792719.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittHH]
gi|145269710|gb|EDK09650.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittHH]
Length = 227
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 140/227 (61%), Gaps = 23/227 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + C + + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELE-KACAIAQDLGIKQTLI 70
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D+ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A G
Sbjct: 71 DT---------SVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQG 121
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA ++
Sbjct: 122 IQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADEL 181
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G +++ + + +HTCY G GC CP+C LR KG ++
Sbjct: 182 G---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|146310572|ref|YP_001175646.1| queuosine biosynthesis protein QueC [Enterobacter sp. 638]
gi|145317448|gb|ABP59595.1| preQ(0) biosynthesis protein QueC [Enterobacter sp. 638]
Length = 242
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 138/225 (61%), Gaps = 24/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ ++L +
Sbjct: 15 AVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDV---ARELALKLGAR---- 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL A AY+
Sbjct: 68 --AHKVLDVTLLNELAVSSLTRD-SIPVPDYEPDADGIPNTFVPGRNILFLTLTAIYAYQ 124
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 125 VKAEAIITGVCETDFSGYPDCRDEFVKALNHAVDLGMAKEIRFETPLMWLDKAETWALAD 184
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ + L+ E+ TCY G + G GC C AC LR G
Sbjct: 185 ---YWEKLELVRTETLTCYNGIK------GDGCGQCAACNLRSNG 220
>gi|145633079|ref|ZP_01788811.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 3655]
gi|144986305|gb|EDJ92884.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 3655]
Length = 227
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 140/228 (61%), Gaps = 25/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARAITQ---------- 61
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 62 -DLGIKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G +++ I + +HTCY G GC CP+C LR KG ++
Sbjct: 181 LG---VLDYIQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|255012284|ref|ZP_05284410.1| putative aluminum resistance protein [Bacteroides sp. 2_1_7]
gi|298374841|ref|ZP_06984799.1| ExsB protein [Bacteroides sp. 3_1_19]
gi|298269209|gb|EFI10864.1| ExsB protein [Bacteroides sp. 3_1_19]
Length = 245
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 142/242 (58%), Gaps = 26/242 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E V +KI
Sbjct: 22 MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIE----VARKIA--- 74
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAA 120
D+ +L ++++ + + N ++++ +++ PNTFVPGRN++FL FAA
Sbjct: 75 ---ADADVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 131
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA GI ++V GV E DYSGYPDCR +R++ +NL M+ +HTPLM K E
Sbjct: 132 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 191
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEK 237
W+L+ ++G DLV ++ TCY G GC CPAC LR+ G +++ KE+
Sbjct: 192 WELSDELGVFDLVR---TQTLTCYNGV------MAEGCGHCPACKLRKDGLEKYLKRKEE 242
Query: 238 YQ 239
Q
Sbjct: 243 NQ 244
>gi|156935002|ref|YP_001438918.1| queuosine biosynthesis protein QueC [Cronobacter sakazakii ATCC
BAA-894]
gi|167016428|sp|A7MFJ8|QUEC_ENTS8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|156533256|gb|ABU78082.1| hypothetical protein ESA_02853 [Cronobacter sakazakii ATCC BAA-894]
Length = 231
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 138/230 (60%), Gaps = 24/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + + K
Sbjct: 4 AVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVASALAASLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D LP+TFVPGRNI+FL A+ AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYDPDAEGLPSTFVPGRNILFLTLASIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A+ LGM V TPLMWL K ETW LA
Sbjct: 114 VQAEAVITGVCETDFSGYPDCRDEFVKALNHAVALGMARDVRFETPLMWLNKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
G D++ ++ TCY G + G GC C AC+LR G +++
Sbjct: 174 YWGKLDVIR---HQTLTCYNGIQ------GDGCGECAACHLRANGLSQYE 214
>gi|145635040|ref|ZP_01790746.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittAA]
gi|229844854|ref|ZP_04464992.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
6P18H1]
gi|145267648|gb|EDK07646.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittAA]
gi|229812235|gb|EEP47926.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
6P18H1]
gi|309973345|gb|ADO96546.1| Probable 7-cyano-7-deazaguanine (preQ0) synthesis protein QueC
[Haemophilus influenzae R2846]
Length = 227
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 140/228 (61%), Gaps = 25/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARAITQ---------- 61
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 62 -DLGIKQTLIDTSVIKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G +++ I + +HTCY G GC CP+C LR KG ++
Sbjct: 181 LG---VLDYIQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|146329947|ref|YP_001210255.1| BcepGomrgp35 [Burkholderia phage BcepGomr]
gi|145321123|gb|ABP63606.1| BcepGomrgp35 [Burkholderia phage BcepGomr]
Length = 301
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 141/246 (57%), Gaps = 28/246 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+++FSGGQDS+T L A+ RV ++F YGQ++ +ELE KIV+
Sbjct: 5 TAVIVFSGGQDSTTILGKAIAEGYRVFPIAFTYGQKHAIELE----QAAKIVDHF----- 55
Query: 70 SLGEDHILPLAILGDISHSSL--TKNVAMKIQDNN--LPNTFVPGRNIIFLVFAATLAYR 125
L I+ L+ LG+++ S+L T K D N LP +FVP RN FL A A +
Sbjct: 56 GLAGLKIVDLSALGEVTTSALIGTDGDVNKPSDANPSLPASFVPNRNAAFLTLAHAYAQQ 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G + GVC TDYSGYPDCR I A+ +N+G ++ +T+ TPLM++ K ET+++A+
Sbjct: 116 VGADELWTGVCMTDYSGYPDCRDSFINALAATLNIGYDTSITIKTPLMYIDKAETFRMAE 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKR------------YEWGYGCNSCPACYLRQKGWME 233
G +++++E SHTCY G R ++WG+GC CPAC LR GW E
Sbjct: 176 LAG---CLDVVIEMSHTCYNGVRSNGEVPTNPSEGGGFFDWGHGCGECPACKLRAGGWRE 232
Query: 234 FKEKYQ 239
+ +Y+
Sbjct: 233 YLRRYR 238
>gi|154490850|ref|ZP_02030791.1| hypothetical protein PARMER_00767 [Parabacteroides merdae ATCC
43184]
gi|154088598|gb|EDN87642.1| hypothetical protein PARMER_00767 [Parabacteroides merdae ATCC
43184]
Length = 273
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 133/233 (57%), Gaps = 27/233 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E V +KI D
Sbjct: 59 AALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIE----VARKIA------AD 108
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L ++++ + + N + + ++ PNTFVPGRN++FL FAA LA
Sbjct: 109 ADVPFQLLDVSLISQLDPNCSLTNTGISMDQEKPADSYPNTFVPGRNMVFLTFAAILARS 168
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI N+V GV E D+SGYPDCR +R++ +NL M+ +HTPLM K E W+LA
Sbjct: 169 KGIFNLVTGVSEADFSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEVWELAD 228
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
++G DLV ++ TCY G GC CPAC LR++G EKY
Sbjct: 229 ELGVFDLVR---TQTLTCYNGI------MAEGCGHCPACKLRREGL----EKY 268
>gi|145627828|ref|ZP_01783629.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
22.1-21]
gi|145639290|ref|ZP_01794896.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittII]
gi|144979603|gb|EDJ89262.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
22.1-21]
gi|145271593|gb|EDK11504.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittII]
gi|309751166|gb|ADO81150.1| Probable 7-cyano-7-deazaguanine (preQ0) synthesis protein QueC
[Haemophilus influenzae R2866]
Length = 227
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 140/228 (61%), Gaps = 25/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARSIAQ---------- 61
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+H++L A ++ +++ LPNTFV GRN +FL++AA A
Sbjct: 62 -DLGIKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKGQ 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G ++N + + +HTCY G GC CP+C LR KG ++
Sbjct: 181 LG---VLNYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|258649113|ref|ZP_05736582.1| ExsB protein [Prevotella tannerae ATCC 51259]
gi|260850762|gb|EEX70631.1| ExsB protein [Prevotella tannerae ATCC 51259]
Length = 226
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 133/228 (58%), Gaps = 24/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA +F V LSF YGQ++ E+E C+ R+ V
Sbjct: 9 ALVVFSGGQDSTTCLFWAKRQFKEVFALSFRYGQKHANEVELAECIAREAGVHFQS---- 64
Query: 70 SLGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRL 126
L ++G + +SLT ++ M + + + PNTFVPGRN+ FL AA A
Sbjct: 65 -------LEAPLIGQLGRNSLTDASLEMDAEQPEGSFPNTFVPGRNLFFLSIAAVYAREH 117
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I ++V GV +TD+SGYPDCR ++++ +NL M+ +HTPLMW K TW LA +
Sbjct: 118 DIRHLVTGVSQTDFSGYPDCRDSFMKSLNVTLNLAMDEQFVIHTPLMWRDKAATWALADE 177
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G +++L+ E+ TCY G + G GC CPAC LR++G E+
Sbjct: 178 LG---VLDLVRNETLTCYNGVK------GDGCGHCPACTLRRRGLEEY 216
>gi|238791438|ref|ZP_04635076.1| Queuosine biosynthesis protein queC [Yersinia intermedia ATCC
29909]
gi|238729054|gb|EEQ20570.1| Queuosine biosynthesis protein queC [Yersinia intermedia ATCC
29909]
Length = 232
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 138/225 (61%), Gaps = 23/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R +L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDV---ARALATQLGAK---- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNV----AMKIQD-NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + +D N +P+TFVPGRNI+FL AA AY+
Sbjct: 57 --AHKVLDVGMLNELAVSSLTRDSIPIPSFDEEDANTVPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 115 VQAQTVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFVTPLMWLDKAETWALA- 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D Q + + ++ TCY G + G GC C AC+LR KG
Sbjct: 174 DYYQQ--LERVRHDTLTCYNGIQ------GDGCGQCAACHLRAKG 210
>gi|68249737|ref|YP_248849.1| PP-loop superfamily ATPase [Haemophilus influenzae 86-028NP]
gi|81335834|sp|Q4QLA8|QUEC_HAEI8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|68057936|gb|AAX88189.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
86-028NP]
Length = 227
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 138/227 (60%), Gaps = 23/227 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE R + +L K
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEK---ARAIVQDLGIKQT 68
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A G
Sbjct: 69 -------LIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQG 121
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA ++
Sbjct: 122 IQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADEL 181
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G D V + +HTCY G GC CP+C LR KG ++
Sbjct: 182 GVLDYVQ---KHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|322514964|ref|ZP_08067977.1| transcription regulator ExsB [Actinobacillus ureae ATCC 25976]
gi|322119072|gb|EFX91232.1| transcription regulator ExsB [Actinobacillus ureae ATCC 25976]
Length = 222
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 137/240 (57%), Gaps = 35/240 (14%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK 58
MN I P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + K
Sbjct: 1 MNSI----PKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAK 56
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNII 114
+ K +L + ++ ++T N M++ Q+ N PNTFV GRN +
Sbjct: 57 DL-----GVKQTLIDTSVI----------KAITSNAMMEVREIKQEGNTPNTFVDGRNAL 101
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
FL++ A A I I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+
Sbjct: 102 FLLYTAIYAKGQDIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMY 161
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L K +TW LA +G D I + +HTCYLG GC++CP+C LR+KG E+
Sbjct: 162 LTKKQTWALADKLGAFD---YIRQHTHTCYLGVEG-------GCHTCPSCILREKGLNEY 211
>gi|301169929|emb|CBW29533.1| predicted aluminum resistance protein [Haemophilus influenzae
10810]
Length = 227
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 140/228 (61%), Gaps = 25/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQ---------- 61
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+H++L A ++ +++ LPNTFV GRN +FL++AA A
Sbjct: 62 -DLGIKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKGQ 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G ++N + + +HTCY G GC CP+C LR KG ++
Sbjct: 181 LG---VLNYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|145641208|ref|ZP_01796788.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021]
gi|260582121|ref|ZP_05849915.1| queuosine biosynthesis protein queC [Haemophilus influenzae NT127]
gi|145274045|gb|EDK13911.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
22.4-21]
gi|260094753|gb|EEW78647.1| queuosine biosynthesis protein queC [Haemophilus influenzae NT127]
Length = 227
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 140/228 (61%), Gaps = 25/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQ---------- 61
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 62 -DLGIKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G +++ + + +HTCY G GC CP+C LR KG ++
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|260581108|ref|ZP_05848929.1| queuosine biosynthesis protein queC [Haemophilus influenzae RdAW]
gi|5853051|gb|AAD54291.1| HI1191 [Haemophilus influenzae]
gi|260092237|gb|EEW76179.1| queuosine biosynthesis protein queC [Haemophilus influenzae RdAW]
Length = 227
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 138/227 (60%), Gaps = 23/227 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + + K
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELE-----KARTIAQDLGIK 66
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+L + +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A G
Sbjct: 67 QTL-----IDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQG 121
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA ++
Sbjct: 122 IQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADEL 181
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G D V + +HTCY G GC CP+C LR KG ++
Sbjct: 182 GVLDYVQ---KHTHTCYEGIEG-------GCRKCPSCILRNKGLKKY 218
>gi|37527722|ref|NP_931067.1| queuosine biosynthesis protein QueC [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|81418478|sp|Q7N0M0|QUEC_PHOLL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|36787158|emb|CAE16234.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 232
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 141/229 (61%), Gaps = 23/229 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL A++++D V ++FDYGQR++ E++ V + + +
Sbjct: 4 AVVVFSGGQDSTTCLIQAINQYDEVHCVTFDYGQRHRAEID----VARNVSHFL-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L + +L +++ SSLT+ N+ + + + + +P+TFVPGRNI+FL AA AY+
Sbjct: 55 VVAHKVLDVTLLNELALSSLTRDNIPVPDHSESEKSAIPSTFVPGRNILFLTLAAIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ A++LG+ + TPLMWL K ETW L+
Sbjct: 115 VEAEAVITGVCETDFSGYPDCRDEFVKALNKAVSLGIARDIRFETPLMWLNKAETWALSD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
D V ++ TCY G + G GC +C AC+LR G ++
Sbjct: 175 YYQHLDFVR---SQTLTCYNGIQ------GNGCGTCAACHLRANGLEQY 214
>gi|15602051|ref|NP_245123.1| hypothetical protein PM0186 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|81637300|sp|Q9CP69|QUEC_PASMU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|12720406|gb|AAK02270.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 228
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 136/228 (59%), Gaps = 26/228 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE KW
Sbjct: 12 AVVIFSGGQDSTTCLFQAIQDYGVENVEVVTFQYGQRHAIELE------------KAKWI 59
Query: 68 -KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+D + ++ +++ I+ ++L A Q + PNTFV GRN +FL++ A A
Sbjct: 60 AQDLGVKQTLIDTSVIKAITQNALMDEQARIEQHGSTPNTFVDGRNALFLLYTAIYAKGQ 119
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 120 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFHLKTPLMYLTKAQTWQLADE 179
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G +++ I + +HTCY+G GC CP+C LR+KG E+
Sbjct: 180 LG---VLDYIRQHTHTCYMGVEQ-------GCGECPSCVLREKGLREY 217
>gi|320540343|ref|ZP_08039995.1| putative aluminum resistance protein [Serratia symbiotica str.
Tucson]
gi|320029663|gb|EFW11690.1| putative aluminum resistance protein [Serratia symbiotica str.
Tucson]
Length = 232
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 139/232 (59%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR+ E + + + +
Sbjct: 4 AVVIFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHHAE-----------IAVAQELSLT 52
Query: 71 LGED--HILPLAILGDISHSSLTK-NVAMKI----QDNNLPNTFVPGRNIIFLVFAATLA 123
LG +L + +L +++ SSLT+ N+ + Q N LP+TFVPGRNI+FL AA A
Sbjct: 53 LGAKAHKVLDVGLLNELAISSLTRDNIPVPAYNLNQKNALPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + I+A+ AI LG+ H+ TPLMWL K ETW L
Sbjct: 113 YQIAAETVITGVCETDFSGYPDCRDEFIKALNQAIVLGIARHIRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A DLV +++ TCY G + G GC C AC+LR G +++
Sbjct: 173 ADYYHQLDLVR---QDTLTCYNGIK------GEGCGECAACHLRANGLAQYQ 215
>gi|251792043|ref|YP_003006763.1| ExsB protein [Aggregatibacter aphrophilus NJ8700]
gi|247533430|gb|ACS96676.1| ExsB protein [Aggregatibacter aphrophilus NJ8700]
Length = 223
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 133/223 (59%), Gaps = 23/223 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + + + K K
Sbjct: 8 ALVIFSGGQDSTTCLFLAIKEFGPENVEVITFQYGQRHVIELE-----KARWIAQDLKVK 62
Query: 69 DSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+L L +++ I+H++L N + +D+ LPNTFV GRN +FL++AA A G
Sbjct: 63 QTL-----LDTSVIKAITHNALMDPNAQISQKDDELPNTFVDGRNALFLLYAAIYAKSQG 117
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I I GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K +TW LA +
Sbjct: 118 IRVIYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYPFDIRTPLMWLDKKDTWALADQL 177
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
G D I + +HTCY G GC CP+C LR++G
Sbjct: 178 GAFD---YIRQHTHTCYNGVEG-------GCGECPSCILRERG 210
>gi|2921156|gb|AAC05081.1| aluminum resistance protein [Arthrobacter viscosus]
Length = 187
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 122/175 (69%), Gaps = 14/175 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGGQDS+TCL WA++RF+ VE ++FDY QR+ +E+EC + K+ LG
Sbjct: 24 VVFSGGQDSTTCLFWAMERFEEVEAVTFDYNQRHSLEIECAQKIAKE-----------LG 72
Query: 73 -EDHILPLAILGDISHSSLTK-NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
HIL +++L ++ ++LT+ ++A++ +D LP+TFVPGRN++FL FA LA ++G
Sbjct: 73 ITHHILDMSLLNQLAPNALTRSDIAVEDGEDGELPSTFVPGRNLLFLSFAGVLASQIGAK 132
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 133 HIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSMDQSFVIDTPLMWLNKEETWELA 187
>gi|284006427|emb|CBA71663.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 239
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 138/235 (58%), Gaps = 23/235 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M D I A+++FSGGQDS+TCL A+ ++D V ++F+Y QR+ E+ V +KI
Sbjct: 1 MMDSIGMLKRAVIVFSGGQDSTTCLIQAIKQYDEVHCITFNYAQRHSTEI----VVAQKI 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAM----KIQDNNLPNTFVPGRNIIF 115
+ ++ IL + +L +++ SSLT+ N+ + K ++ LPNTFVPGRNI+F
Sbjct: 57 CQHF-----NIKAHKILDVGLLNELAISSLTRDNIPIPSYEKSSESELPNTFVPGRNILF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
L AA AY++ ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL
Sbjct: 112 LTLAAIYAYQVQAEVVITGVCETDFSGYPDCRDEFVKALNQAICLGIAKAIRFETPLMWL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
K ETW LA + + ++ TCY G G GC C AC+LR +G
Sbjct: 172 NKAETWALADYYHSFEFIQ---NKTLTCYNGI------IGDGCQKCAACHLRAEG 217
>gi|238783602|ref|ZP_04627623.1| Queuosine biosynthesis protein queC [Yersinia bercovieri ATCC
43970]
gi|238715480|gb|EEQ07471.1| Queuosine biosynthesis protein queC [Yersinia bercovieri ATCC
43970]
Length = 232
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 137/226 (60%), Gaps = 25/226 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ R+ +L K
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDV---ARELATQLGAKAH-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ ++ + N +P+TFVPGRNI+FL AA AY
Sbjct: 59 ----KVLDVGMLNELAVSSLTRD-SIPVPTYNEEDTDAVPSTFVPGRNILFLTLAAIYAY 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW LA
Sbjct: 114 QVQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALA 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D V ++ TCY G + G GC C AC+LR KG
Sbjct: 174 DYYQQLDRVR---NDTLTCYNGIQ------GDGCGECAACHLRAKG 210
>gi|270263114|ref|ZP_06191384.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
gi|270042802|gb|EFA15896.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
Length = 232
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 138/230 (60%), Gaps = 23/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL+++D V ++FDYGQR++ E+E R+ V L K
Sbjct: 4 AVVVFSGGQDSTTCLVQALEQYDEVHCITFDYGQRHRAEIEV---ARELAVALGVKGHK- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMK----IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT+ N+ + Q LP+TFVPGRNI+FL A+ AY+
Sbjct: 60 -----VLDVTMLNELAISSLTRDNIPVPAFNGTQPGGLPSTFVPGRNILFLTLASIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ GVCETD+SGYPDCR + ++A+ + LG+ + TPLMWL K E W LA
Sbjct: 115 VEAQAVITGVCETDFSGYPDCRDEFVKALHHGVALGLARDIRFETPLMWLDKAEIWALA- 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D Q + + ++ TCY G + G GC C AC+LR +G ++
Sbjct: 174 DYYRQ--LERVRSDTLTCYNGVK------GEGCGECTACHLRAEGLAAYQ 215
>gi|319776566|ref|YP_004139054.1| PP-loop superfamily ATPase [Haemophilus influenzae F3047]
gi|329124078|ref|ZP_08252625.1| transcription regulator ExsB [Haemophilus aegyptius ATCC 11116]
gi|317451157|emb|CBY87390.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae F3047]
gi|327467503|gb|EGF13001.1| transcription regulator ExsB [Haemophilus aegyptius ATCC 11116]
Length = 227
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 140/228 (61%), Gaps = 25/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARSIAQ---------- 61
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+H++L A ++ +++ LPNTFV GRN +FL++AA A
Sbjct: 62 -DLGIKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKGQ 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G +++ + + +HTCY G GC CP+C LR KG ++
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|330996187|ref|ZP_08320077.1| protein ExsB [Paraprevotella xylaniphila YIT 11841]
gi|329573691|gb|EGG55282.1| protein ExsB [Paraprevotella xylaniphila YIT 11841]
Length = 231
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 133/229 (58%), Gaps = 24/229 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL++FSGGQDS+TCL WA F +V LSF YGQ++ E VEL
Sbjct: 7 TALVVFSGGQDSTTCLFWAKKHFKKVVALSFVYGQKHVKE-----------VELAKAIAS 55
Query: 70 SLGED-HILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
G D + ++ +G + +SLT + ++ + PNTFVPGRN+ F+ AA A
Sbjct: 56 RAGVDWDCMDVSFVGSLGRNSLTDSTMQMDEEKPEGSCPNTFVPGRNLFFISIAAVYARE 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+ +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K +TW LA
Sbjct: 116 RGVNHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKCQTWALAD 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G +++L+ ++ TCY G + G GC CPAC LR +G ++
Sbjct: 176 ELG---VLDLVRHDTLTCYNGVQ------GDGCGHCPACKLRNEGLHKY 215
>gi|319897342|ref|YP_004135538.1| pp-loop superfamily atpase [Haemophilus influenzae F3031]
gi|317432847|emb|CBY81212.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae F3031]
Length = 227
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 140/228 (61%), Gaps = 25/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQ---------- 61
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+H++L A ++ +++ LPNTFV GRN +FL++AA A
Sbjct: 62 -DLGIKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKGQ 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G +++ + + +HTCY G GC CP+C LR KG ++
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKY 218
>gi|332880678|ref|ZP_08448351.1| protein ExsB [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681312|gb|EGJ54236.1| protein ExsB [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 231
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 137/231 (59%), Gaps = 28/231 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN--KVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ++ +VEL + R + W
Sbjct: 7 TALVVFSGGQDSTTCLFWAKKHFKKVVALSFVYGQKHVKEVELAKAIASRADV-----DW 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLA 123
+ ++ +G + +SLT + M++ + + PNTFVPGRN+ F+ AA A
Sbjct: 62 D-------CMDVSFVGSLGRNSLT-DATMQMDEEKPEGHCPNTFVPGRNLFFISIAAVYA 113
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K +TW L
Sbjct: 114 RERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKCQTWAL 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A ++G +++L+ ++ TCY G + G GC CPAC LR +G ++
Sbjct: 174 ADELG---VLDLVRHDTLTCYNGVQ------GDGCGHCPACKLRNEGLHKY 215
>gi|319945216|ref|ZP_08019478.1| transcription regulator ExsB [Lautropia mirabilis ATCC 51599]
gi|319741786|gb|EFV94211.1| transcription regulator ExsB [Lautropia mirabilis ATCC 51599]
Length = 228
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 133/229 (58%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
A ++FSGGQDS+TCL AL F VE ++F YGQR+ +EL+ +W
Sbjct: 7 AAVIFSGGQDSTTCLFLALHEFGPGNVEAITFQYGQRHAIELD------------KARWI 54
Query: 68 KDSLG-EDHILPLAILGDISHSSL-TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ LG + ++ +++ I+H++L ++ + +D PNTFV GRN +FL++AA A
Sbjct: 55 AEDLGVKQTLIDTSVIKAITHNALLDESATISQEDGQPPNTFVDGRNALFLLYAAIHAKA 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI + GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K +TW LA
Sbjct: 115 QGIRTLYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYTFDIRTPLMWLTKKDTWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D + + +HTCYLG GC CP+C LR++G E+
Sbjct: 175 RLGAFDYIR---QHTHTCYLGVEG-------GCGQCPSCVLRERGLHEY 213
>gi|110825738|sp|P44124|QUEC_HAEIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 228
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 139/228 (60%), Gaps = 24/228 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + + K
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELE-----KARTIAQDLGIK 66
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+L + +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A G
Sbjct: 67 QTL-----IDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQG 121
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-HTPLMWLKKYETWKLAQD 186
I +I+ GVCETD+SGYPDCR I+++ +NL M+ + + TPLM+L K +TW+LA +
Sbjct: 122 IQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPIPISKTPLMYLTKAQTWQLADE 181
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G D V + +HTCY G GC CP+C LR KG ++
Sbjct: 182 LGVLDYVQ---KHTHTCYEGIEG-------GCRKCPSCILRNKGLKKY 219
>gi|37522606|ref|NP_925983.1| hypothetical protein gll3037 [Gloeobacter violaceus PCC 7421]
gi|81707945|sp|Q7NCE2|QUEC_GLOVI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|35213607|dbj|BAC90978.1| gll3037 [Gloeobacter violaceus PCC 7421]
Length = 234
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 127/233 (54%), Gaps = 29/233 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------VEL 63
AL++FSGGQDS+TC + A +D V ++F+Y QR+ +ELE V + + + L
Sbjct: 4 ALVVFSGGQDSTTCAALACREYDEVHAVTFEYNQRHAIELESARAVGQALGLTGHEFIRL 63
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P K + PL +S + L + + + TFVPGRNI+FL AA A
Sbjct: 64 GPLLKGTS------PL-----VSDAPLGQYASAAELPAGVEPTFVPGRNILFLTLAANRA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM---ESHVTVHTPLMWLKKYET 180
+ LG +IVIGVCE D++GY DCR + A+ A+ G+ + + +HTPLM L K ET
Sbjct: 113 FCLGTGDIVIGVCEADFAGYWDCRQVFVEAMARALGEGIYGDANAIRIHTPLMRLTKAET 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL+ ++ G+ +L SHTCY G R GC C AC LR +G+ E
Sbjct: 173 VKLSVEVLGERFEE-VLALSHTCYAGVRG-------GCGRCHACILRDRGFRE 217
>gi|307261576|ref|ZP_07543244.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868699|gb|EFN00508.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 193
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 117/205 (57%), Gaps = 25/205 (12%)
Query: 32 FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW--KDSLGEDHILPLAILGDISHSS 89
+ VE ++F YGQR+ +ELE W KD + ++ +++ I+ ++
Sbjct: 1 MENVEVVTFQYGQRHAIELE------------KAAWIAKDLGVKQTLIDTSVIKAITSNA 48
Query: 90 LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHD 149
+ + +K Q+ N PNTFV GRN +FL++ A A GI I GVCETD+SGYPDCR
Sbjct: 49 MMEEREIK-QEGNTPNTFVDGRNALFLLYTAIYAKGQGIQTIFTGVCETDFSGYPDCRDV 107
Query: 150 TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
++++ +NL M+ + + TPLM+L K +TW LA +G D I + +HTCYLG
Sbjct: 108 FVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWALADKLGAFD---YIRQHTHTCYLGVEG 164
Query: 210 KRYEWGYGCNSCPACYLRQKGWMEF 234
GC++CP+C LR+KG E+
Sbjct: 165 -------GCHTCPSCVLREKGLNEY 182
>gi|307250348|ref|ZP_07532297.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307252732|ref|ZP_07534623.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307254994|ref|ZP_07536812.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257148|ref|ZP_07538920.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306857623|gb|EFM89730.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859764|gb|EFM91786.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306861867|gb|EFM93843.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864310|gb|EFM96221.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 193
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 117/205 (57%), Gaps = 25/205 (12%)
Query: 32 FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW--KDSLGEDHILPLAILGDISHSS 89
+ VE ++F YGQR+ +ELE W KD + ++ +++ I+ ++
Sbjct: 1 MENVEVVTFQYGQRHAIELE------------KAAWIAKDLGVKQTLIDTSVIKAITSNA 48
Query: 90 LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHD 149
+ + +K Q+ N PNTFV GRN +FL++ A A GI I GVCETD+SGYPDCR
Sbjct: 49 MMEEREIK-QEGNTPNTFVDGRNALFLLYTAIYAKGQGIRTIFTGVCETDFSGYPDCRDV 107
Query: 150 TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
++++ +NL M+ + + TPLM+L K +TW LA +G D I + +HTCYLG
Sbjct: 108 FVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWALADKLGAFD---YIRQHTHTCYLGVEG 164
Query: 210 KRYEWGYGCNSCPACYLRQKGWMEF 234
GC++CP+C LR+KG E+
Sbjct: 165 -------GCHTCPSCVLREKGLNEY 182
>gi|307248117|ref|ZP_07530145.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306855294|gb|EFM87469.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 193
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 25/202 (12%)
Query: 35 VETLSFDYGQRNKVELECRLCVRKKIVELMPKW--KDSLGEDHILPLAILGDISHSSLTK 92
VE ++F YGQR+ +ELE W KD + ++ +++ I+ +++ +
Sbjct: 4 VEVVTFQYGQRHAIELE------------KAAWIAKDLGVKQTLIDTSVIKAITSNAMME 51
Query: 93 NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
+K Q+ N PNTFV GRN +FL++ A A GI I GVCETD+SGYPDCR ++
Sbjct: 52 EREIK-QEGNTPNTFVDGRNALFLLYTAIYAKGQGIRTIFTGVCETDFSGYPDCRDVFVK 110
Query: 153 AIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
++ +NL M+ + + TPLM+L K +TW LA +G D I + +HTCYLG
Sbjct: 111 SMNVTLNLAMDYNFNIRTPLMYLTKKQTWALADKLGAFD---YIRQHTHTCYLGVEG--- 164
Query: 213 EWGYGCNSCPACYLRQKGWMEF 234
GC++CP+C LR+KG E+
Sbjct: 165 ----GCHTCPSCVLREKGLNEY 182
>gi|269964053|ref|ZP_06178358.1| ExsB protein [Vibrio harveyi 1DA3]
gi|269831194|gb|EEZ85348.1| ExsB protein [Vibrio harveyi 1DA3]
Length = 159
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 100/147 (68%), Gaps = 12/147 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V K + S
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAEKVAKDL---------S 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++G
Sbjct: 55 VAAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAI 154
++ GVCETD+SGYPDCR D ++ I
Sbjct: 115 AETVITGVCETDFSGYPDCRDDFVKPI 141
>gi|317473659|ref|ZP_07932948.1| ExsB protein [Anaerostipes sp. 3_2_56FAA]
gi|316898949|gb|EFV20974.1| ExsB protein [Anaerostipes sp. 3_2_56FAA]
Length = 181
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 108/178 (60%), Gaps = 17/178 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVE 62
+ K A+++FSGGQDS+TCL WA +++ V LSFDYGQ++ EL C +C + +
Sbjct: 1 MSKPTKAVVVFSGGQDSTTCLFWAKKKYEEVIALSFDYGQKHSDELICAKEICKKYGV-- 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E +IL +A+L ++ +SLT+ V + + PN+FV GRN++FL FA
Sbjct: 59 ----------EHYILDMALLNQLAPNSLTRADIEVDKEAPETGTPNSFVDGRNMLFLTFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K
Sbjct: 109 AVFAKQRDIHVLVTGVSQSDFSGYPDCRHVFITSLETTLTLAMDYEFEVITPLMWIDK 166
>gi|289808109|ref|ZP_06538738.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 160
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 108/167 (64%), Gaps = 15/167 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 4 AVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARAHK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY+
Sbjct: 60 -----VLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
+ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPL
Sbjct: 114 VKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPL 160
>gi|16273113|ref|NP_439347.1| hypothetical protein HI1191 [Haemophilus influenzae Rd KW20]
gi|1574118|gb|AAC22844.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
Length = 196
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 116/181 (64%), Gaps = 16/181 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + +
Sbjct: 12 AIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQ---------- 61
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG + ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 62 -DLGIKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-HTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + + TPLM+L K +TW+LA
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPIPISKTPLMYLTKAQTWQLAD 180
Query: 186 D 186
+
Sbjct: 181 E 181
>gi|329723320|gb|EGG59850.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
VCU144]
Length = 155
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 103/159 (64%), Gaps = 10/159 (6%)
Query: 79 LAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
+++L ++ ++LT++ ++++ D+ +PNTFVP RN++FL FA LAY++ +I+ GVCE
Sbjct: 1 MSLLSQLTPNALTQHELSIEDNDDGIPNTFVPARNLLFLSFAGALAYQIHAKHIITGVCE 60
Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197
TD+SGYPDCR I+++ ++L M+ +HTPLMWL K +TW L+ +G +++ I
Sbjct: 61 TDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQTWALSDKLG---VLDYIR 117
Query: 198 EESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ TCY G G GC CPAC+LR +G + E
Sbjct: 118 HNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 150
>gi|116327179|ref|YP_796899.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332169|ref|YP_801887.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122280102|sp|Q04PP1|QUEC_LEPBJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|122284975|sp|Q055M9|QUEC_LEPBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|116119923|gb|ABJ77966.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125858|gb|ABJ77129.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 242
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 125/237 (52%), Gaps = 42/237 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL AL +++ LSFDYGQ++K+EL KKI
Sbjct: 28 AVVLLSGGLDSTTCLYQALADGKKIQALSFDYGQKHKIELS----YAKKITR-------Q 76
Query: 71 LGEDHIL----PLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAAT 121
LG H + P LG SSLT+ ++++ N+L PNT+VPGRNI+FL FA
Sbjct: 77 LGISHTIQKLKPELFLG----SSLTQK-SLRVPKNSLGKEEIPNTYVPGRNILFLSFAVC 131
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLK 176
LA G +I IGV DYSGYPDCR + I+ ETAI LG + S + + TPL L
Sbjct: 132 LAEGTGSNSIYIGVNAMDYSGYPDCRPEFIKTYETAIQLGTKKGNQGSPIKIVTPLQNLS 191
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K E L + + + + +CY K K C C AC LR+KG+ E
Sbjct: 192 KKEIVLLG------NRLQVPFHLTFSCYDPKNRK------ACGKCDACLLRKKGFQE 236
>gi|24213033|ref|NP_710514.1| PP-loop superfamily ATPase [Leptospira interrogans serovar Lai str.
56601]
gi|45656192|ref|YP_000278.1| hypothetical protein LIC10288 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|81407974|sp|Q72VK9|QUEC_LEPIC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81471975|sp|Q8F964|QUEC_LEPIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24193722|gb|AAN47532.1| PP-loop superfamily ATPase [Leptospira interrogans serovar Lai str.
56601]
gi|45599426|gb|AAS68915.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 242
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 123/237 (51%), Gaps = 42/237 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL A+ ++ LSFDYGQR+K+EL V +K
Sbjct: 28 AVVLLSGGLDSTTCLYQAIADGKEIQALSFDYGQRHKIELSYAKKVTRK----------- 76
Query: 71 LGEDHIL----PLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAAT 121
LG H + P LG SSLT+ ++ + N+L PNT+VPGRNI+FL FA +
Sbjct: 77 LGIPHTIQKLKPELFLG----SSLTQK-SLHVPKNSLRKEEIPNTYVPGRNILFLSFAVS 131
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLK 176
LA G +I IGV DYSGYPDCR + I+ E AI LG + + + TPL L
Sbjct: 132 LAEGTGSDSIYIGVNSMDYSGYPDCRPEFIKMFEMAIQLGTKKGSQGPSIKILTPLQNLS 191
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K E L G Q V L + +CY K G C C AC LR+KG+ E
Sbjct: 192 KKEIVLL----GNQLKVPFHL--TFSCYDPKN------GKACGKCDACLLRKKGFQE 236
>gi|21672728|ref|NP_660795.1| hypothetical protein BUsg463 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091577|sp|Q8K986|QUEC_BUCAP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21623372|gb|AAM68006.1| hypothetical 25.5 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 232
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 123/230 (53%), Gaps = 24/230 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++FSGGQDS+TCL + + + ++FDY Q +K E++ + ++
Sbjct: 5 LIIFSGGQDSTTCLIHYTNIYKEIYCITFDYNQLHKSEIDSARFISNYF---------NV 55
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATLAYRL 126
+ + L L ++S SSLT + + I DN+ LP+TFVPGRNI+FL ++ A+
Sbjct: 56 KKHIFVDLKCLKNLSISSLT-DEKISILDNHPLNFSLPSTFVPGRNILFLTLSSIYAFNH 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +IV+GV E D+SGYPDCR+ ++ + + +GM + +PL+ L K E W L+
Sbjct: 115 QINSIVLGVNEIDFSGYPDCRNAFLKKMNDVVQIGMNCKINFQSPLINLSKAEIWALSDY 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
IL + TCY G + G GC C +C LR G+ ++K
Sbjct: 175 WNS---TQFILNNTVTCYQGIQ------GKGCGQCQSCILRNDGFNKWKS 215
>gi|332970921|gb|EGK09897.1| transcription regulator ExsB [Psychrobacter sp. 1501(2011)]
Length = 268
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 119/243 (48%), Gaps = 41/243 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS TCL WA R+ +V +SF+YGQR+ EL + K+
Sbjct: 36 NAVVLLSGGLDSVTCLYWAKSRYSKVTAVSFNYGQRHNSELVAAKTIAKQ---------- 85
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM--------------KIQDNNLPNTFVPGRNIIF 115
G DH + + + SSLT + I ++ +PNT+VP RN IF
Sbjct: 86 -AGVDHKIIDIDIAQLGGSSLTDHDMTVPDGDADKFPTHTDTIDNDAIPNTYVPARNTIF 144
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----T 170
L +A +A +IVIGV DYSGYPDCR + I A E NL ++ VT H T
Sbjct: 145 LSYALAVAEVTDANHIVIGVSSVDYSGYPDCRPEYIEAFEVMANLATKAGVTGHKLHIQT 204
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
PL L K +T +L +G + ++ +CY K G C C +C LR++G
Sbjct: 205 PLQKLSKAQTIQLGNSLG------VDYSQTISCY-----KADAEGRACGICDSCTLRKRG 253
Query: 231 WME 233
+ +
Sbjct: 254 FSD 256
>gi|125975583|ref|YP_001039493.1| exsB protein [Clostridium thermocellum ATCC 27405]
gi|256005912|ref|ZP_05430857.1| exsB protein [Clostridium thermocellum DSM 2360]
gi|281416595|ref|ZP_06247615.1| exsB protein [Clostridium thermocellum JW20]
gi|189038911|sp|A3DK21|QUEC_CLOTH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|125715808|gb|ABN54300.1| preQ(0) biosynthesis protein QueC [Clostridium thermocellum ATCC
27405]
gi|255990116|gb|EEU00253.1| exsB protein [Clostridium thermocellum DSM 2360]
gi|281407997|gb|EFB38255.1| exsB protein [Clostridium thermocellum JW20]
gi|316939702|gb|ADU73736.1| exsB protein [Clostridium thermocellum DSM 1313]
Length = 222
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 122/232 (52%), Gaps = 35/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCLS AL V LSFDYGQRN+ ELE K++V+
Sbjct: 4 AVVLLSGGLDSTTCLSVALAEGYEVYPLSFDYGQRNRKELESA----KQVVKYF-----K 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYRL 126
L E I+ + G++ S+LT ++ + + D +P T+VP RNIIFL +A A +
Sbjct: 55 LKEHKIVKI---GNVGGSALT-DMNIDVPDYKGLPTIPVTYVPARNIIFLSYAVGYAEVV 110
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
I IGV DYSGYPDCR + I A + AINLG +S V + TPL+ L K E
Sbjct: 111 DAEAIFIGVNAVDYSGYPDCRPEFIEAFQKAINLGTKSGVNGKPVKIITPLINLSKAEII 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KLA + N L + TCY G C C +C LR KG+ E
Sbjct: 171 KLACE------NNAPLHLTTTCYRGGEK-------ACGVCDSCVLRLKGFKE 209
>gi|116749415|ref|YP_846102.1| exsB protein [Syntrophobacter fumaroxidans MPOB]
gi|189029540|sp|A0LJR5|QUEC_SYNFM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|116698479|gb|ABK17667.1| exsB protein [Syntrophobacter fumaroxidans MPOB]
Length = 234
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 119/235 (50%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR------LCVRKKIVELM 64
A++LFSGG DS+TCL+ A LSF Y QR+ VE+E L R+ +V +
Sbjct: 9 AVVLFSGGIDSTTCLAVAKAEGFEAYALSFFYHQRHGVEVEAARRSAPALGAREHLVLEL 68
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P D I A+ G H + K+V ++ + +P T+VP RN IFL FA A
Sbjct: 69 PL-------DRIGGSALTG---HEEVPKDVPVEKMSDRIPATYVPARNTIFLSFALAWAE 118
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKY 178
LG +I IGV DYSGYPDCR + I A E NL + + VHTPL+ L K
Sbjct: 119 VLGAADIFIGVNALDYSGYPDCRPEYIAAFERMANLAIRETVEGRMRIKVHTPLIRLTKG 178
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E K ++G L +H+CY D R G C C +C LR+KG+ME
Sbjct: 179 EIIKRGLELG------LDYSLTHSCY--DPDAR---GLACGHCDSCILRKKGFME 222
>gi|110816246|sp|Q4FTN4|QUEC_PSYA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 259
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 125/244 (51%), Gaps = 32/244 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC------VRK 58
+ K+ +A++L SGG DS TCL WA R+ V +SFDYGQR+ EL V
Sbjct: 22 LHKSQNAVVLLSGGLDSVTCLYWAKARYASVTAVSFDYGQRHNSELIAAKAIAETAGVNH 81
Query: 59 KIVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+I+++ + + S DH + I+ D +I ++ +PNT+VP RN IFL
Sbjct: 82 RIIDIDIAQLGGSSLTDHSM---IVPDGDTDKFPDKKRDEIDNDAIPNTYVPARNTIFLS 138
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPL 172
+A +A +IVIGV DYSGYPDCR + I A + NL ++ H+++ TPL
Sbjct: 139 YALAVAEVTDSNHIVIGVSSVDYSGYPDCRPEYIAAFQHMANLATKAGVTGHHLSIQTPL 198
Query: 173 MWLKKYETWKLAQDIG---GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
L K +T +L +G GQ + +CY + G+ C C +C LR++
Sbjct: 199 QQLSKAKTIELGLSLGVDYGQTI---------SCYQADAN-----GFACGVCDSCALRRQ 244
Query: 230 GWME 233
G+ +
Sbjct: 245 GFAQ 248
>gi|95929965|ref|ZP_01312705.1| ExsB [Desulfuromonas acetoxidans DSM 684]
gi|95133934|gb|EAT15593.1| ExsB [Desulfuromonas acetoxidans DSM 684]
Length = 227
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 120/232 (51%), Gaps = 30/232 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TCL+WA + LSF YGQR+ +ELE K P+
Sbjct: 5 AIVLYSGGLDSTTCLAWAKAQGMTPYALSFRYGQRHSIELE-------KAESFAPQMG-- 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E H++ L I S+LT ++ + + D +P T+VP RN IFL + A LG
Sbjct: 56 -AEQHLIVDIDLRKIGGSALTADIEVPKDRQIDEAIPVTYVPARNTIFLSYGLAWAEALG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETW 181
+IVIGV DYSGYPDCR + I A + NL ++ V +HTPL+ L K +
Sbjct: 115 AFDIVIGVNALDYSGYPDCRPEFIEAYQNMANLATKAAVEGSGQYQIHTPLLHLSKADII 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
++ D+G V+ L +H+CY D R C C +C LR G+ +
Sbjct: 175 RMGTDLG----VDYAL--THSCYDPAPDGR-----ACGRCDSCVLRLNGFAQ 215
>gi|303247445|ref|ZP_07333717.1| exsB protein [Desulfovibrio fructosovorans JJ]
gi|302491141|gb|EFL51033.1| exsB protein [Desulfovibrio fructosovorans JJ]
Length = 233
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 124/235 (52%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++LFSGG DS+TCL+ A + LSF YGQR++VEL+ K++ M +
Sbjct: 8 AVVLFSGGLDSTTCLAVAREEGFAPCALSFAYGQRHEVELQ----AAKRVAAAM-----N 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ +LPL LG I S+LT ++A+ + +P T+VP RN IFL A A
Sbjct: 59 VAAHLVLPLP-LGAIGGSALTADIAVPKDRDVAAMEAEIPVTYVPARNTIFLSMALGWAE 117
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH--VTVHTPLMWLKKY 178
LG +I IGV DYSGYPDCR + A E NL +E H +++HTPL+ L K
Sbjct: 118 VLGAQDIYIGVNALDYSGYPDCRPQFVAAFEAMANLAVKEAVEGHLRISIHTPLLHLTKA 177
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +L +G V+ L +H+CY G C C +C LR+KG+ E
Sbjct: 178 DIVRLGTRLG----VDYGL--THSCY-----DPDPSGLACGRCDSCLLRKKGFAE 221
>gi|71065331|ref|YP_264058.1| ExsB family transcriptional regulator [Psychrobacter arcticus
273-4]
gi|71038316|gb|AAZ18624.1| probable ExsB protein [Psychrobacter arcticus 273-4]
Length = 285
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 125/244 (51%), Gaps = 32/244 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC------VRK 58
+ K+ +A++L SGG DS TCL WA R+ V +SFDYGQR+ EL V
Sbjct: 48 LHKSQNAVVLLSGGLDSVTCLYWAKARYASVTAVSFDYGQRHNSELIAAKAIAETAGVNH 107
Query: 59 KIVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+I+++ + + S DH + I+ D +I ++ +PNT+VP RN IFL
Sbjct: 108 RIIDIDIAQLGGSSLTDHSM---IVPDGDTDKFPDKKRDEIDNDAIPNTYVPARNTIFLS 164
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPL 172
+A +A +IVIGV DYSGYPDCR + I A + NL ++ H+++ TPL
Sbjct: 165 YALAVAEVTDSNHIVIGVSSVDYSGYPDCRPEYIAAFQHMANLATKAGVTGHHLSIQTPL 224
Query: 173 MWLKKYETWKLAQDIG---GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
L K +T +L +G GQ + +CY + G+ C C +C LR++
Sbjct: 225 QQLSKAKTIELGLSLGVDYGQTI---------SCYQADAN-----GFACGVCDSCALRRQ 270
Query: 230 GWME 233
G+ +
Sbjct: 271 GFAQ 274
>gi|153953061|ref|YP_001393826.1| transcriptional regulator [Clostridium kluyveri DSM 555]
gi|219853712|ref|YP_002470834.1| hypothetical protein CKR_0369 [Clostridium kluyveri NBRC 12016]
gi|189038909|sp|A5N597|QUEC_CLOK5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764326|sp|B9DYU5|QUEC_CLOK1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|146345942|gb|EDK32478.1| Predicted transcriptional regulator [Clostridium kluyveri DSM 555]
gi|219567436|dbj|BAH05420.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 226
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 123/234 (52%), Gaps = 35/234 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L A + V +SFDYGQR+K E++C V +
Sbjct: 4 AVVLLSGGLDSTTVLYLAKSQGYEVYAMSFDYGQRHKKEIQCARDVAS----------GT 53
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATLAYR 125
D +L + S+LT N ++K+ + N +P T+VP RN+IFL +AA+ A
Sbjct: 54 GAADFVLVTTNMNAWGGSALTDN-SIKVPEFNEESEKIPVTYVPARNMIFLSYAASYAET 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKYE 179
+G +I IGV E DYSGY DCRH+ I ++E INLG + ++ +H P ++ K E
Sbjct: 113 IGAYDIFIGVSEVDYSGYVDCRHEFIDSMEKTINLGTVCAVEHKKYIKIHAPFLYKTKSE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K+ D+G + E++ TCY G+ + C C +C LR + + E
Sbjct: 173 EIKIGMDLG------VKYEKTWTCYNGEE-------FACGICDSCRLRLEAFKE 213
>gi|296113092|ref|YP_003627030.1| ExsB family protein [Moraxella catarrhalis RH4]
gi|295920786|gb|ADG61137.1| ExsB family protein [Moraxella catarrhalis RH4]
gi|326560085|gb|EGE10475.1| ExsB family protein [Moraxella catarrhalis 46P47B1]
gi|326560468|gb|EGE10850.1| ExsB family protein [Moraxella catarrhalis 7169]
gi|326561671|gb|EGE12008.1| ExsB family protein [Moraxella catarrhalis 103P14B1]
gi|326570453|gb|EGE20493.1| ExsB family protein [Moraxella catarrhalis BC8]
gi|326573430|gb|EGE23398.1| ExsB family protein [Moraxella catarrhalis 101P30B1]
Length = 232
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 121/238 (50%), Gaps = 31/238 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVEL 63
+A++LFSGG DS+TCL WA +F V +SF YGQR+ EL +L VR ++++
Sbjct: 6 NAVVLFSGGLDSTTCLYWAKSQFKTVTAVSFCYGQRHSSELHAAQNIAKKLSVRHHVIDI 65
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ K S D ++S + ++V D P T+VP RN IFL +A +
Sbjct: 66 DIAKLGGSALTDM--------NLSVPNHDESVTYSDADQVAPITYVPARNTIFLSYALAV 117
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKK 177
A + I+IGV DYSGYPDCR D I A ET NL S H+++ PL L K
Sbjct: 118 AEVTQASAIIIGVSSVDYSGYPDCRPDYIAAFETMANLATVSGRQGNHLSIIAPLQNLSK 177
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+T L +G V+ + S CY G C C +C+LR++G+M+ K
Sbjct: 178 ADTLTLGISLG----VDYSMTVS--CYQAD-----ALGRACGHCDSCHLRKQGFMDAK 224
>gi|326564201|gb|EGE14437.1| ExsB family protein [Moraxella catarrhalis 12P80B1]
gi|326565800|gb|EGE15962.1| ExsB family protein [Moraxella catarrhalis BC1]
gi|326571136|gb|EGE21160.1| ExsB family protein [Moraxella catarrhalis BC7]
gi|326575674|gb|EGE25597.1| ExsB family protein [Moraxella catarrhalis CO72]
gi|326577140|gb|EGE27034.1| ExsB family protein [Moraxella catarrhalis O35E]
Length = 232
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 121/238 (50%), Gaps = 31/238 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVEL 63
+A++LFSGG DS+TCL WA +F V +SF YGQR+ EL +L VR ++++
Sbjct: 6 NAVVLFSGGLDSTTCLYWAKSQFKTVTAVSFCYGQRHSSELHAAQNIAKKLSVRHHVIDI 65
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ K S D ++S + ++V D P T+VP RN IFL +A +
Sbjct: 66 DIAKLGGSALTDM--------NLSVPNHDESVTYSDADQVAPITYVPARNTIFLSYALAV 117
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKK 177
A + I+IGV DYSGYPDCR D I A ET NL S H+++ PL L K
Sbjct: 118 AEVTQASAIIIGVSSVDYSGYPDCRPDYIAAFETMANLATVSGRQGNHLSIIAPLQNLSK 177
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+T L +G V+ + S CY G C C +C+LR++G+M+ K
Sbjct: 178 ADTLTLGISLG----VDYSMTVS--CYQAD-----ALGRACGHCDSCHLRRQGFMDAK 224
>gi|93005607|ref|YP_580044.1| ExsB [Psychrobacter cryohalolentis K5]
gi|110816247|sp|Q1QCP3|QUEC_PSYCK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|92393285|gb|ABE74560.1| ExsB [Psychrobacter cryohalolentis K5]
Length = 259
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 124/244 (50%), Gaps = 32/244 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC------VRK 58
+ K+ +A++L SGG DS TCL WA R+ V +SFDYGQR+ EL V
Sbjct: 22 LHKSQNAVVLLSGGLDSVTCLYWAKARYASVTAVSFDYGQRHNSELVAAKAIAETAGVNH 81
Query: 59 KIVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+I+++ + + S DH + I+ D +I ++ +PNT+VP RN IFL
Sbjct: 82 RIIDIDIAQLGGSSLTDHSM---IVPDGDTDKFPDKKRDEIDNDAIPNTYVPARNTIFLS 138
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPL 172
+A +A +IVIGV DYSGYPDCR + I A + NL ++ H+++ TPL
Sbjct: 139 YALAVAEVTDSNHIVIGVSSVDYSGYPDCRPEYIAAFQHMANLATKAGVTGHHLSIQTPL 198
Query: 173 MWLKKYETWKLAQDIG---GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
L K +T +L +G GQ + +CY + G C C +C LR++
Sbjct: 199 QQLSKAKTIELGLSLGVDYGQTI---------SCYQADAN-----GLACGVCDSCALRRQ 244
Query: 230 GWME 233
G+ +
Sbjct: 245 GFAQ 248
>gi|239906319|ref|YP_002953060.1| putative aluminum resistance protein [Desulfovibrio magneticus
RS-1]
gi|259551518|sp|C4XPJ3|QUEC_DESMR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|239796185|dbj|BAH75174.1| putative aluminum resistance protein [Desulfovibrio magneticus
RS-1]
Length = 235
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 123/235 (52%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++LFSGG DS+TCL+ A LSF+YGQR+KVELE V K + +
Sbjct: 9 AVVLFSGGLDSTTCLAVARRDGFLPCALSFEYGQRHKVELEAARRVAKAM---------A 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKI------QDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ILPL LG I S+LT ++ + + ++P T+VP RN IFL A A
Sbjct: 60 VTTHLILPLP-LGSIGGSALTADIDVPKDRDIGEMEADIPVTYVPARNTIFLSMALGWAE 118
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKY 178
LG ++I IGV DYSGYPDCR + I A E NL ++ V +HTPL+ L K
Sbjct: 119 VLGASDIYIGVNALDYSGYPDCRPEFIAAFEAMANLAVKEAVEGRLAIRIHTPLLHLSKA 178
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +G V+ L +H+CY D G C C +C LR+KG+ E
Sbjct: 179 GIVELGTSLG----VDYGL--THSCYDPAPD-----GLACGRCDSCLLRRKGFEE 222
>gi|148653563|ref|YP_001280656.1| exsB protein [Psychrobacter sp. PRwf-1]
gi|189038944|sp|A5WGB5|QUEC_PSYWF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148572647|gb|ABQ94706.1| exsB protein [Psychrobacter sp. PRwf-1]
Length = 256
Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 121/236 (51%), Gaps = 27/236 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVEL 63
+A++L SGG DS TCL WA R+ +V +SF+YGQR+ EL + V KI+++
Sbjct: 25 NAVVLLSGGLDSVTCLYWAKARYAKVTAVSFNYGQRHNSELVAAKSIAGQAGVNHKIIDI 84
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + S DH + + GD + I + +PNT+VP RN IFL +A +
Sbjct: 85 DIAQLGGSSLTDHDMTVPD-GDADKFPTHTD---DIDNQAIPNTYVPARNTIFLSYALAV 140
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLKK 177
A +IVIGV DYSGYPDCR + I A E NL ++ VT H TPL L K
Sbjct: 141 AEVTDANHIVIGVSSVDYSGYPDCRPEYIEAFEVMANLATKAGVTGHKLHIQTPLQKLSK 200
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+T +L +G + ++ +CY K G C C +C LR++G+ +
Sbjct: 201 AQTIQLGNSLG------VDYSQTISCY-----KADSEGRACGICDSCTLRKRGFSD 245
>gi|257453857|ref|ZP_05619135.1| ExsB protein [Enhydrobacter aerosaccus SK60]
gi|257448784|gb|EEV23749.1| ExsB protein [Enhydrobacter aerosaccus SK60]
Length = 236
Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 120/236 (50%), Gaps = 30/236 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVEL 63
+A++L SGG DS TCL WA + V +SF+YGQR+ EL V +I+++
Sbjct: 9 NAVVLLSGGLDSVTCLYWAKANYTNVTAVSFNYGQRHNSELNAAKKIAATAQVNHRIIDI 68
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + S D L ++ D + + N ++++P T+VP RN IFL +A L
Sbjct: 69 DLAQLGGSALTDASL---VVPDAKQTDFSDNQ----HNDSIPITYVPARNTIFLSYALAL 121
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPLMWLKK 177
A IVIGV DYSGYPDCR + I A E NL M +H+ + TPL+ L K
Sbjct: 122 AEVTQSNTIVIGVNAVDYSGYPDCRPEYIEAFEKMANLATKAGVMGNHLHIATPLLHLSK 181
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E KL +G V+ L S CY + R C C +CYLRQ+G+++
Sbjct: 182 AEIIKLGVSLG----VDYALTVS--CYRADSEGR-----ACAHCDSCYLRQQGFLQ 226
>gi|13541927|ref|NP_111615.1| ATPase [Thermoplasma volcanium GSS1]
gi|74575424|sp|Q979P0|QUEC_THEVO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|14325358|dbj|BAB60262.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 241
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 120/232 (51%), Gaps = 33/232 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L++AL++ V +SFDYGQR+ E+ K E + K+ +
Sbjct: 5 AVVLLSGGLDSSTVLAYALNKGFEVYAISFDYGQRHLKEM--------KSSEAISKFYNV 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
D + L I S+LT N+ + +D +P T+VP RN IFL AA A
Sbjct: 57 ---DRKIVKVDLRSIGKSALTDNIEVPSRDISTIEEEIPVTYVPARNTIFLSIAAAYAES 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHTPLMWLKKYETW 181
LG + IG DYSGYPDCR + A+E A++L G++ ++ PL +L K +
Sbjct: 114 LGTNEVFIGANAIDYSGYPDCRPEYFNAMENALSLGTKIGLKEKFHINVPLQYLSKADIV 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL + N+ E + +CY G+ + C C +C LR KG+ME
Sbjct: 174 KLGVKL------NVPYELTWSCYKGEEE-------ACGECDSCQLRLKGFME 212
>gi|325295563|ref|YP_004282077.1| exsB protein [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325066011|gb|ADY74018.1| exsB protein [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 233
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 121/238 (50%), Gaps = 38/238 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
SA+++ SGG DS+T L WA F++V ++F YGQR+ +E+E R+ +K VE
Sbjct: 3 SAIVILSGGLDSTTALYWAKKNFNKVFAITFYYGQRHSLEVEMARIIAKKAKVE------ 56
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAM-------KIQDNNLPNTFVPGRNIIFLVFAA 120
+HIL + S+LT KN+ + +I++ +P T+VP RN IFL AA
Sbjct: 57 -----EHILFEVDISKFGGSALTDKNLEVPETQSIEEIKERGIPITYVPFRNGIFLSIAA 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN----LGMESHV-TVHTPLMWL 175
A TN+V G DYSGYPDCR + + A+E A+N LG E +H PL+ L
Sbjct: 112 AYAETKNTTNLVGGWNAVDYSGYPDCRPEFLAAMEEALNKGTKLGSEGKSWKIHAPLINL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K E KL +G S +CY G C C +C LR KGWME
Sbjct: 172 TKGEIIKLGLSLGAD------YSYSISCYRGTE-------VPCGKCDSCVLRAKGWME 216
>gi|89894801|ref|YP_518288.1| hypothetical protein DSY2055 [Desulfitobacterium hafniense Y51]
gi|89334249|dbj|BAE83844.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 243
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 30/237 (12%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ ++KKA ++L SGG DS+TC+S A + LSFDYGQR++ ELE K V
Sbjct: 8 SSVMKKA---VVLLSGGLDSTTCMSVAHKAGYELYPLSFDYGQRHQRELEA-----AKAV 59
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K K E ++ + +G + + + V +D +P T+VP RNI+FL +A
Sbjct: 60 AQYYKVK----EHRLIKIEHVGGSALTDASIQVPDYTEDGQIPVTYVPARNILFLSYALG 115
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----PLMWLK 176
+G I IG+ DYSGYPDCR + ++A + +++G ++ V+ T PL++L
Sbjct: 116 YGEVMGAEAIFIGISSVDYSGYPDCRPEFLQAFQKVVDVGTKAGVSGQTIAIKAPLLYLS 175
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K ET +LA + G L + +CY G C +C +C LR KG+ E
Sbjct: 176 KAETIQLAAENGAP------LHHTTSCYRGGEK-------ACGTCDSCTLRLKGFAE 219
>gi|110816205|sp|Q24VU8|QUEC2_DESHY RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
Length = 233
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 27/228 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TC+S A + LSFDYGQR++ ELE K V K K
Sbjct: 4 AVVLLSGGLDSTTCMSVAHKAGYELYPLSFDYGQRHQRELEA-----AKAVAQYYKVK-- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
E ++ + +G + + + V +D +P T+VP RNI+FL +A +G
Sbjct: 57 --EHRLIKIEHVGGSALTDASIQVPDYTEDGQIPVTYVPARNILFLSYALGYGEVMGAEA 114
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----PLMWLKKYETWKLAQ 185
I IG+ DYSGYPDCR + ++A + +++G ++ V+ T PL++L K ET +LA
Sbjct: 115 IFIGISSVDYSGYPDCRPEFLQAFQKVVDVGTKAGVSGQTIAIKAPLLYLSKAETIQLAA 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ G L + +CY G C +C +C LR KG+ E
Sbjct: 175 ENGAP------LHHTTSCYRGGEK-------ACGTCDSCTLRLKGFAE 209
>gi|303242853|ref|ZP_07329317.1| exsB protein [Acetivibrio cellulolyticus CD2]
gi|302589599|gb|EFL59383.1| exsB protein [Acetivibrio cellulolyticus CD2]
Length = 222
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 122/232 (52%), Gaps = 35/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++LFSGG DS+TCLS A V LSFDYGQR+K ELEC V+ + K+
Sbjct: 4 AIVLFSGGLDSTTCLSVAFKEGYEVYPLSFDYGQRHKKELEC--------VKQITKYY-K 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + I+ + ++ S+LT + ++++ D +P T+VP RNIIFL +AA A +
Sbjct: 55 IKSNKIIRI---DNVGGSALTDS-SIEVPDYQGLPQIPVTYVPARNIIFLSYAAGYAEAI 110
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
I IGV DYSGYPDCR + I A E I +G + V + TPL+ L K E
Sbjct: 111 EADAIYIGVNAVDYSGYPDCRPEFIEAFEKMIKVGTKRGVNGKPIKIETPLINLSKAEII 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KLA + N L + +CY G+ C C +C LR KG+ E
Sbjct: 171 KLACE------NNAPLHLTTSCYKGEEK-------ACGVCDSCVLRLKGFKE 209
>gi|219669238|ref|YP_002459673.1| exsB protein [Desulfitobacterium hafniense DCB-2]
gi|254764332|sp|B8G1I4|QUEC_DESHD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|219539498|gb|ACL21237.1| exsB protein [Desulfitobacterium hafniense DCB-2]
Length = 233
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 27/228 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TC+S A + LSFDYGQR++ ELE K V K K
Sbjct: 4 AVVLLSGGLDSTTCMSVAHKAGYELYPLSFDYGQRHQRELEA-----AKAVAQYYKVK-- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
E ++ + +G + + + V +D +P T+VP RNI+FL +A +G
Sbjct: 57 --EHRLIKIEHVGGSALTDASIQVPDYTEDGQIPVTYVPARNILFLSYALGYGEVIGAEA 114
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----PLMWLKKYETWKLAQ 185
I IG+ DYSGYPDCR + ++A + +++G ++ V+ T PL++L K ET +LA
Sbjct: 115 IFIGISSVDYSGYPDCRPEFLQAFQKVVDVGTKAGVSGQTIAIKAPLLYLSKGETIQLAA 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ G L + +CY G C +C +C LR KG+ E
Sbjct: 175 ENGAP------LHHTTSCYRGGEK-------ACGTCDSCTLRLKGFAE 209
>gi|183219600|ref|YP_001837596.1| hypothetical protein LEPBI_I0175 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909739|ref|YP_001961294.1| PP-loop superfamily ATPase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|189038920|sp|B0S9S9|QUEC_LEPBA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764356|sp|B0SK77|QUEC_LEPBP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167774415|gb|ABZ92716.1| PP-loop superfamily ATPase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778022|gb|ABZ96320.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 248
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 124/247 (50%), Gaps = 48/247 (19%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE-------TLSFDYGQRNKVELECRLCVRKKIVEL 63
A++L SGG DS+TCL A F + LSFDY Q++K+EL KKI +
Sbjct: 18 AIVLLSGGLDSTTCLYLAAKDFGYPKNKKLPLLALSFDYSQKHKIEL----TKSKKIAK- 72
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN----------NLPNTFVPGRNI 113
+LG H++ G SSLT++ +K++ N +PNT+VPGRNI
Sbjct: 73 ------TLGIKHVIQKLDPGFFLGSSLTES-KIKVRKNAKSLFSGDETEIPNTYVPGRNI 125
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------ 167
+FL FA +LA G +I IGV DYSGYPDCR + I + + NLG + V+
Sbjct: 126 LFLSFALSLAEGHGYDSIYIGVNALDYSGYPDCRPEFIDSFQKMANLGTKKGVSGTGDSI 185
Query: 168 -VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
+ TPL+ L K E +L +G L +H+CY G C C +C L
Sbjct: 186 QIKTPLLHLGKKEIIELGMSVGAP------LGLTHSCY------DPVSGKPCGKCDSCIL 233
Query: 227 RQKGWME 233
R KG++E
Sbjct: 234 RAKGFLE 240
>gi|319790596|ref|YP_004152229.1| exsB protein [Thermovibrio ammonificans HB-1]
gi|317115098|gb|ADU97588.1| exsB protein [Thermovibrio ammonificans HB-1]
Length = 235
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 38/242 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
A+++FSGG DS+T L WA F++V ++F YGQR+ +E+E ++ K V+
Sbjct: 3 GAVVIFSGGLDSTTALYWAKRHFEKVYAITFYYGQRHSLEVEFAKITAEKANVD------ 56
Query: 69 DSLGEDHILPLAILGDISHSSLT--------KNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+H++ L I S+LT + +I++ +P T+VP RN IF+ AA
Sbjct: 57 -----EHLIFPVDLSRIGASALTDRSIEVPETSSVEEIKERGIPVTYVPFRNGIFISIAA 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
A G TN+V G DYSGYPDCR ++A+E A+NLG ++ +H PL+ L
Sbjct: 112 AYAEAKGCTNLVGGWNAVDYSGYPDCRPQFLKAMEEALNLGTKAGAEGKRWHIHAPLINL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + KL ++G +L +CY G C C +C LR KGW E
Sbjct: 172 TKGQIIKLGLELGADYSYSL------SCYRGDE-------VPCMKCDSCILRAKGWEEVG 218
Query: 236 EK 237
E+
Sbjct: 219 EE 220
>gi|288957455|ref|YP_003447796.1| queuosine biosynthesis protein [Azospirillum sp. B510]
gi|288909763|dbj|BAI71252.1| queuosine biosynthesis protein [Azospirillum sp. B510]
Length = 242
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 119/239 (49%), Gaps = 37/239 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A RV LSF YGQR+ VELE +++V M
Sbjct: 10 AVVLVSGGLDSTTVLAIAKAEGYRVNALSFRYGQRHSVELEAA----RRVVAAMGV---- 61
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN----------NLPNTFVPGRNIIFLVFAA 120
E H++ L S+LT +A+ D+ +P T+VP RN +FL FA
Sbjct: 62 --ERHVIADIDLRAFGGSALTDAIAVPKHDSAADLEAELGQGIPVTYVPARNTVFLSFAL 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMW 174
A LG +++ IGV DYSGYPDCR + I A ET NL ++ V +H PLM
Sbjct: 120 AWAETLGASDLFIGVNALDYSGYPDCRPEYIAAFETLANLATKAGVEGGSRFRIHAPLMT 179
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K + ++G V+ L +H+CY G C +C +C LR KG+ E
Sbjct: 180 LDKAAIVRRGLELG----VDYSL--THSCY-----DPTPAGLSCGACDSCLLRLKGFSE 227
>gi|189424272|ref|YP_001951449.1| exsB protein [Geobacter lovleyi SZ]
gi|189420531|gb|ACD94929.1| exsB protein [Geobacter lovleyi SZ]
Length = 223
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 120/231 (51%), Gaps = 29/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+S G DS+TCL+ A D+ +SFDYGQR++ EL+ +K+ +
Sbjct: 4 AVILYSSGLDSTTCLAIARDQGFAPYAISFDYGQRHRHELDLARANARKLGAV------- 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+H++ L + S+LT + + + +++P T+VP RN IFL FA A LG
Sbjct: 57 ---EHLVVAFDLRQVGGSALTSEIDVPKEGVADDIPVTYVPARNTIFLSFALGWAEVLGA 113
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + I A + NL ++ H T+HTPL+ L K E K
Sbjct: 114 YDIFIGVNALDYSGYPDCRPEYIDAYQRMANLATKAGVEGTGHFTIHTPLINLTKAEIIK 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G + ++H+CY D G C C +C LR KG+ E
Sbjct: 174 QGTALG------VDYSQTHSCYDPTPD-----GLSCGQCDSCRLRLKGFSE 213
>gi|16081996|ref|NP_394411.1| transcription regulator (exsB) related protein [Thermoplasma
acidophilum DSM 1728]
gi|74543780|sp|Q9HJL6|QUEC_THEAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|10640266|emb|CAC12080.1| transcription regulator (exsB) related protein [Thermoplasma
acidophilum]
Length = 238
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 117/232 (50%), Gaps = 33/232 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L++A+ V +SFDYGQR+ E+ E + K+
Sbjct: 6 AVVLLSGGLDSSTVLAYAISLGYEVHAISFDYGQRHSREMNSS--------EELAKY--- 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYR 125
G D + L I S+LT ++ + +D +P T+VP RN IFL AA A
Sbjct: 55 YGVDRKIVHVDLRSIGKSALTDDIEVPSRDLESIPEEIPVTYVPARNTIFLSIAAAYAES 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME----SHVTVHTPLMWLKKYETW 181
+G T+I IG DYSGYPDCR + A+E A+ LG E + ++ PL +L K +
Sbjct: 115 IGSTDIFIGANAIDYSGYPDCRPEYFNAMEKALTLGTEIGLRKGMHINVPLQYLTKADII 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
++ +G + E++ +CY G C C +C LR KG+ME
Sbjct: 175 RMGLKLG------VPYEKTWSCYKGGEK-------ACGECDSCLLRLKGFME 213
>gi|116619444|ref|YP_821600.1| exsB protein [Candidatus Solibacter usitatus Ellin6076]
gi|116222606|gb|ABJ81315.1| exsB protein [Candidatus Solibacter usitatus Ellin6076]
Length = 223
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 116/238 (48%), Gaps = 35/238 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P+A+ L SGG DS+TCL+ A LSFDYGQR+KVEL+ +
Sbjct: 2 PNAVCLLSGGLDSATCLALARREGYSCYALSFDYGQRHKVELDA-----------AARVA 50
Query: 69 DSLGEDHILPLAILGDI-SHSSLT------KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+LG + L + I D+ S+LT K + +P T+VP RN IFL FA
Sbjct: 51 QALGAERHLVVKIGLDVFGGSALTAAIDVPKGRSTGEMGAGIPITYVPARNTIFLSFALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWL 175
A LG ++I IGV DYSGYPDCR + I A E NL + V +HTPL+ L
Sbjct: 111 WAEVLGSSDIFIGVNALDYSGYPDCRPEYIEAYERLANLATRAGVEGTTRMKIHTPLLHL 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K KL +++G L + +CY G C C AC LR+KG+ E
Sbjct: 171 SKAGIVKLGRELG------LDFGLTFSCY-----DPGPGGLACGQCDACLLRRKGFDE 217
>gi|23097767|ref|NP_691233.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
gi|81747126|sp|Q8ETE9|QUEC_OCEIH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|22775991|dbj|BAC12268.1| transcriptional regulator (exsB family) [Oceanobacillus iheyensis
HTE831]
Length = 221
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 27/228 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++ SGG DS+TC+ + + +SF YGQR+ E+E KK+ +
Sbjct: 6 AVVILSGGLDSTTCMGVGKEAGYELYPISFHYGQRHDREIENA----KKVASYF-----N 56
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ E + L L +I SSLT V+ + ++PNT+VPGRN IFL AA+ A +G
Sbjct: 57 VTEHKVFSLEFLKEIGGSSLTDQSMEVSQEGVGEDVPNTYVPGRNTIFLSIAASYAEAIG 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
I +GV DYSGYPDCR + I A++ I G ++ +T+ PL+ L K +T KL
Sbjct: 117 AEKIYVGVSAVDYSGYPDCRPEFIEAMQQTIYQGTNANPAMTIEAPLIDLSKGDTVKLGM 176
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ N+ + +CYLG + C C +C LR +G+ E
Sbjct: 177 KL------NVPYHLTTSCYLGGEE-------ACGECDSCRLRLQGFEE 211
>gi|83593292|ref|YP_427044.1| ExsB [Rhodospirillum rubrum ATCC 11170]
gi|110816255|sp|Q2RSY8|QUEC_RHORT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|83576206|gb|ABC22757.1| ExsB [Rhodospirillum rubrum ATCC 11170]
Length = 241
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 117/235 (49%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A V LSF YGQR+ VELE V +
Sbjct: 10 AIVLVSGGLDSTTTLAIAQAEGFTVNALSFSYGQRHAVELEAARRVTQAFAV-------- 61
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAY 124
E H++ L S+LT ++ + Q + +P T+VP RN +FL FA A
Sbjct: 62 --ERHVIATIDLRQFGGSALTDSIGVPKQRSLETMGAGIPVTYVPARNTVFLSFALAWAE 119
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKY 178
L ++ IGV DYSGYPDCR + I A +T NL + V T+HTPL+ L K
Sbjct: 120 VLEANDVFIGVNALDYSGYPDCRPEYISAFQTMANLATKRGVEGTGVLTIHTPLIALTKG 179
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + D+G V+ L +H+CY D E G C +C +C LR KG+ E
Sbjct: 180 QIIRRGLDLG----VDYAL--THSCY----DPSAE-GEACGTCDSCLLRLKGFAE 223
>gi|117923750|ref|YP_864367.1| exsB protein [Magnetococcus sp. MC-1]
gi|189038921|sp|A0L4R8|QUEC_MAGSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|117607506|gb|ABK42961.1| preQ(0) biosynthesis protein QueC [Magnetococcus sp. MC-1]
Length = 228
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 125/232 (53%), Gaps = 29/232 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA++L SGG DS+T L A R+ LSF YGQR+ +ELE RK+ + L P
Sbjct: 6 SAVVLLSGGLDSATVLRMAHATGQRIHALSFRYGQRHTMELEM---ARKQALSL-PGVAH 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + L L++ G S+LT ++ + + +N +P T+VP RN++FL A A L
Sbjct: 62 RIMD---LQLSLFGG---SALTADIPVPKGGVDENTIPVTYVPARNMVFLSLALAWAESL 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETW 181
G ++ IGV DYSGYPDCR + I++ + NL G+E H TVHTPL+ L K +
Sbjct: 116 GAQHLYIGVNAVDYSGYPDCRPEFIQSFQQTANLATKAGVEGHPFTVHTPLINLTKAQII 175
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G V+ L S CY D + G GC C AC LR +G+ E
Sbjct: 176 QQGLALG----VDYGLTRS--CY--DPDAQ---GAGCGLCDACRLRLQGFAE 216
>gi|283853630|ref|ZP_06370865.1| exsB protein [Desulfovibrio sp. FW1012B]
gi|283570992|gb|EFC19017.1| exsB protein [Desulfovibrio sp. FW1012B]
Length = 233
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 115/237 (48%), Gaps = 33/237 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++LFSGG DS+TCL+ A LSF+YGQR+ VE +
Sbjct: 5 PKAVVLFSGGLDSTTCLAVARSEGFLPCALSFEYGQRHSVE---------LLAARRVAAA 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAATL 122
+ ILPL LG I S+LT ++ + + +P T+VP RN IFL A
Sbjct: 56 LDVHAHLILPLP-LGAIGGSALTADIDVPKDRDPATMETEIPATYVPARNTIFLSLALGW 114
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLK 176
A LG +I IGV DYSGYPDCR I A E NL ++ V +HTPL+ L
Sbjct: 115 AEVLGAEDIFIGVNALDYSGYPDCRPQFIAAFEAMANLAVKEAVEGRLRIRIHTPLLHLT 174
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K +L +G V+ L +H+CY E G C C +C LR+KG+ E
Sbjct: 175 KAGIVRLGTSLG----VDFGL--THSCY-----DPTEEGLACGRCDSCLLRKKGFEE 220
>gi|326203400|ref|ZP_08193264.1| exsB protein [Clostridium papyrosolvens DSM 2782]
gi|325986220|gb|EGD47052.1| exsB protein [Clostridium papyrosolvens DSM 2782]
Length = 226
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 125/238 (52%), Gaps = 35/238 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L A + + +SF+YGQR+ ELEC + +K +
Sbjct: 5 AVVLLSGGMDSTTALYIAKSQGYEIYAISFNYGQRHFKELECAKIISEK----------A 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAATLAYR 125
++HI+ + S+LT + ++ + D+N+ P T+VP RN+IFL FAA+ A
Sbjct: 55 GVKEHIIVNTNMDAWGGSALTDS-SISVPDSNIHNGKIPITYVPARNMIFLSFAASYAEV 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKYE 179
+G +I IGV E DYSGY DCR + I A+E AIN G + +H PL+ + K +
Sbjct: 114 IGAQDIFIGVSEVDYSGYVDCRQEFIDAMENAINFGTVCAVEEGKKIKIHAPLVCMTKSD 173
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
KL +G V+ L + TCY G+ C +C +C LR K + E EK
Sbjct: 174 EIKLGIKLG----VDYSL--TWTCYRGEE-------LACGTCDSCSLRLKAFKEAGEK 218
>gi|48478380|ref|YP_024086.1| hypothetical protein PTO1308 [Picrophilus torridus DSM 9790]
gi|74567352|sp|Q6KZF9|QUEC_PICTO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|48431028|gb|AAT43893.1| hypothetical protein PTO1308 [Picrophilus torridus DSM 9790]
Length = 239
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 119/236 (50%), Gaps = 41/236 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ L SGG DS T L++AL V LSFDYGQR+K ELE KKI +
Sbjct: 4 AVCLLSGGLDSPTVLAYALSNGYEVFPLSFDYGQRHKKELESS----KKICDY------- 52
Query: 71 LGEDHILPLAI----LGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAAT 121
+ L L I L I HS+LT N+ + D N++P T+VP RN IFL AA
Sbjct: 53 ----YHLNLKIIKIDLRAIGHSALTDNIDVPENDLKSIGNDIPVTYVPARNTIFLSIAAA 108
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHTPLMWLKK 177
A L I IG DYSGYPDCR + +E A++L G+ + + ++ PL +L K
Sbjct: 109 YAETLNANEIFIGANAIDYSGYPDCRPEYFNKMEEALSLGTSIGLRNGIKINVPLQYLTK 168
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ KL + + + + + +CY G++ C C +C LR KG+ME
Sbjct: 169 SDIVKLGRKL------KVPYKLTWSCYNGRKK-------ACGKCDSCLLRLKGFME 211
>gi|148266057|ref|YP_001232763.1| exsB protein [Geobacter uraniireducens Rf4]
gi|189038915|sp|A5G8S2|QUEC_GEOUR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|146399557|gb|ABQ28190.1| preQ(0) biosynthesis protein QueC [Geobacter uraniireducens Rf4]
Length = 228
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 117/231 (50%), Gaps = 29/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TC++ A +SF YGQR+K ELE K + +
Sbjct: 5 AVILYSGGLDSTTCMAIAKAEGFEPYAMSFAYGQRHKAELELAKGNAKPMGAV------- 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+H++ L + S+LT + + + N++P T+VP RN IFL FA A LG
Sbjct: 58 ---EHMVVEFDLRKMGGSALTAEIDVPKEGVGNDIPVTYVPARNTIFLSFALGWAETLGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + I A ET NL ++ V T+HTPL+ L K E +
Sbjct: 115 FDIFIGVNALDYSGYPDCRPEYIAAFETMANLATKAGVEGAGRFTIHTPLIHLTKAEIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G + +H+CY D+ C C +C LR KG+ E
Sbjct: 175 KGLSLG------VDYGRTHSCYDPTADE-----LACGRCDSCRLRLKGFAE 214
>gi|197120054|ref|YP_002140481.1| 7-cyano-7-deazaguanine synthase [Geobacter bemidjiensis Bem]
gi|254764348|sp|B5EDQ7|QUEC_GEOBB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|197089414|gb|ACH40685.1| 7-cyano-7-deazaguanine synthase [Geobacter bemidjiensis Bem]
Length = 225
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 120/230 (52%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TCL+ A ++ LSF YGQR++ ELE + +L + +
Sbjct: 5 AVILYSGGLDSTTCLAIAKEQGFAPYALSFSYGQRHQQELE--------VAKLNARPMGA 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ DH+L L + S+LT ++ + + +P T+VP RN IFL FA A L
Sbjct: 57 V--DHLLVEFDLRKMGGSALTSDIEVPKEGVGEEIPVTYVPARNTIFLSFALGWAETLDC 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + I A ET NL ++ V +HTPL+ L K E +
Sbjct: 115 FDIFIGVNALDYSGYPDCRPEFISAYETMANLATKAGVEGKRLKIHTPLISLTKAEIIQK 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G + ++H+CY D G C C +C LR KG+ E
Sbjct: 175 GLSLG------VDYSKTHSCYDPAED-----GAACGRCDSCRLRLKGFAE 213
>gi|322421610|ref|YP_004200833.1| exsB protein [Geobacter sp. M18]
gi|320127997|gb|ADW15557.1| exsB protein [Geobacter sp. M18]
Length = 229
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TCL+ A + LSF YGQR++ EL + +L + +
Sbjct: 5 AVILYSGGLDSTTCLAIARHQGFEPYALSFSYGQRHQHEL--------AVAKLNARPMGA 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ DH+L L + S+LT ++ + ++P T+VP RN IFL FA A LG
Sbjct: 57 V--DHLLVDFDLRKMGGSALTSDIEVPKAGVGEDIPVTYVPARNTIFLSFALGWAETLGC 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + I A E NL ++ V T+HTPL+ L K E K
Sbjct: 115 FDIFIGVNALDYSGYPDCRPEFIAAYEAMANLATKAGVEGKRMTIHTPLISLSKAEIIKT 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G + ++H+CY D G C C +C LR KG+ E
Sbjct: 175 GLTLG------VDYGKTHSCYDPSED-----GAACGLCDSCRLRLKGFAEL 214
>gi|253702376|ref|YP_003023565.1| exsB protein [Geobacter sp. M21]
gi|259551532|sp|C6E7E7|QUEC_GEOSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|251777226|gb|ACT19807.1| exsB protein [Geobacter sp. M21]
Length = 225
Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 119/230 (51%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TCL+ A + LSF YGQR++ ELE + +L + +
Sbjct: 5 AVILYSGGLDSTTCLAIAKKQGFAPYALSFSYGQRHQQELE--------VAKLNARPMGA 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ DH+L L + S+LT ++ + + +P T+VP RN IFL FA A L
Sbjct: 57 V--DHLLVEFDLRKMGGSALTSDIEVPKEGVGEEIPVTYVPARNTIFLSFALGWAETLDC 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + I A ET NL ++ V +HTPL+ L K E +
Sbjct: 115 FDIFIGVNALDYSGYPDCRPEFISAYETMANLATKAGVEGKRLQIHTPLISLTKAEIIQK 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G + ++H+CY D G C C +C LR KG+ E
Sbjct: 175 GISLG------VDYSKTHSCYDPAED-----GAACGRCDSCRLRLKGFAE 213
>gi|327398275|ref|YP_004339144.1| exsB protein [Hippea maritima DSM 10411]
gi|327180904|gb|AEA33085.1| exsB protein [Hippea maritima DSM 10411]
Length = 239
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 115/235 (48%), Gaps = 30/235 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++++SGG DS+TCL WALD FD V T++F Y QR+ +E++ KK +EL + K+
Sbjct: 4 AVIIYSGGLDSTTCLFWALDEFDEVHTITFYYAQRHSIEVD----FSKKTLELAQRIKNK 59
Query: 71 LGEDHILPLAILGDISHSSLT-------KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ H + L I S+LT KN + + +P T+VP RN +FL A LA
Sbjct: 60 TIKSHYFSID-LSQIGGSALTDPSIDVPKNRDEEKISSEIPITYVPFRNGVFLSITAALA 118
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKY 178
+ I NI+ G DYSGYPDCR D + A E AIN G ++ + TPL+ + K
Sbjct: 119 EKNEIYNIIGGWNMLDYSGYPDCRDDFLTAFEKAINYGTKAGSQGKTFKILTPLLKMNKA 178
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + G + G C C AC LR KG+ E
Sbjct: 179 QIILFGKKHGADYSYSYSCYSGD-------------GIPCGECDACILRAKGFKE 220
>gi|325279460|ref|YP_004252002.1| exsB protein [Odoribacter splanchnicus DSM 20712]
gi|324311269|gb|ADY31822.1| exsB protein [Odoribacter splanchnicus DSM 20712]
Length = 223
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 126/238 (52%), Gaps = 36/238 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A + FD + ++F+YGQ++ EL+ +
Sbjct: 4 AIVLLSGGLDSSTALYLAQSQGFDEIYAITFEYGQKHDKELK---------SAIAIAKAA 54
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAY 124
+ E I+ L +L S +LT + M+++D ++P+T+VP RN++FL AA+ A
Sbjct: 55 GVKEHKIVNL-LLNQWSGCALT-DPDMEVEDGHIERQDIPSTYVPARNMVFLSVAASWAD 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKY 178
L IT+I IGV E DYSGY DCR + I+A+E AINLG + +T+H P M L K
Sbjct: 113 ALDITDIFIGVSEVDYSGYVDCREEFIKAMENAINLGTVLGAEKKQRITIHAPFMHLTKA 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
E KL +G V+ L + TCY G + C C +C LR K + E E
Sbjct: 173 EEVKLGVSLG----VDFGL--TWTCYRGGE-------HPCGVCDSCLLRAKAFAEANE 217
>gi|148244668|ref|YP_001219362.1| trans-regulatory protein ExsB [Candidatus Vesicomyosocius okutanii
HA]
gi|189029333|sp|A5CWP9|QUEC_VESOH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|146326495|dbj|BAF61638.1| trans-regulatory protein ExsB [Candidatus Vesicomyosocius okutanii
HA]
Length = 230
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 121/233 (51%), Gaps = 29/233 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + +LSFDYGQ+ + EL+ + K +
Sbjct: 10 AVILLSGGLDSTTTLAIAKSKKFECYSLSFDYGQKQESELQSAKNIAKIFIT-------- 61
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E ++ +++ G IS S+LT + V Q N +P T+VP RN IFL +A + L
Sbjct: 62 -SEHRVVKISLSG-ISKSALTNDNIDVPKFSQSNKIPITYVPARNTIFLSYALAWSEVLN 119
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETWK 182
+I IGV E DYSGYPDCR I+A E NL G+E +T+HTPL+ L K + K
Sbjct: 120 CQHIFIGVNELDYSGYPDCRKSYIKAFEIMANLATKQGIEGQKLTIHTPLIHLNKAQIIK 179
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G ++ L + TCY ++ G C C AC R+ G+ E K
Sbjct: 180 KGLSLG----IDYTL--TTTCYQADKN-----GKACGICDACEYRKLGFKEAK 221
>gi|307823681|ref|ZP_07653909.1| exsB protein [Methylobacter tundripaludum SV96]
gi|307734975|gb|EFO05824.1| exsB protein [Methylobacter tundripaludum SV96]
Length = 225
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 113/231 (48%), Gaps = 30/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS T L+ A + + LSFDYGQR+ EL V D
Sbjct: 5 AIVLLSGGLDSITVLALAKKQGFKCYALSFDYGQRHNAEL----------VAAAQIAADY 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
EDH + L I S+LT V QD +P T+VP RN IFL FA A L
Sbjct: 55 QVEDHKIIKLGLSSIGGSALTDEHIAVPHSPQDG-IPVTYVPARNTIFLSFALGWAEVLK 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETWK 182
+++I IGV DYSGYPDCR + I+A + NL ++ H +HTPL+ L K E K
Sbjct: 114 LSDIFIGVNAVDYSGYPDCRPEFIKAFQQLANLATKAGVEGEHFVIHTPLIALSKAEIIK 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
++G + + + +CY E G C C AC LR+ G+ E
Sbjct: 174 QGVELG------VDYQRTVSCYSAD-----EQGRACQVCDACRLRKIGFTE 213
>gi|39995591|ref|NP_951542.1| exsB protein [Geobacter sulfurreducens PCA]
gi|81703348|sp|Q74FW9|QUEC_GEOSL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|39982354|gb|AAR33815.1| exsB protein [Geobacter sulfurreducens PCA]
Length = 237
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 117/231 (50%), Gaps = 29/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TCL+ A +SF YGQR+ VELE L R + +
Sbjct: 5 AVVLYSGGLDSTTCLAIARAEGFEPHAMSFSYGQRHSVELE--LAKRNA--------RPA 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+H++ L + S+LT ++A+ + +++P T+VP RN IFL FA A LG
Sbjct: 55 GAVEHMVVEFDLRKVGGSALTADIAVPKEGVGDDIPVTYVPARNTIFLSFALGWAEVLGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + I A ET NL V +H PLM L K E +
Sbjct: 115 FDIFIGVNALDYSGYPDCRPEYISAFETMANLATRVGVEGTGRFRIHAPLMRLTKAEIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L +H+CY G C C +C LR KG+ E
Sbjct: 175 KGLALG----VDYGL--THSCY-----DPSPAGVACGLCDSCRLRLKGFAE 214
>gi|298504610|gb|ADI83333.1| 7-cyano-7-deazaguanine synthase [Geobacter sulfurreducens KN400]
Length = 237
Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 119/231 (51%), Gaps = 29/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TCL+ A +SF YGQR+ VELE L R + +
Sbjct: 5 AVVLYSGGLDSTTCLAIARAEGFEPHAMSFSYGQRHSVELE--LAKRNA--------RPA 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+H++ L + S+LT ++A+ + +++P T+VP RN IFL FA A LG
Sbjct: 55 GAVEHMVVEFDLRKVGGSALTADIAVPKEGVGDDIPVTYVPARNTIFLSFALGWAEVLGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAIN----LGME--SHVTVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + I A ET N LG+E +H PLM L K E +
Sbjct: 115 FDIFIGVNALDYSGYPDCRPEYISAFETMANLATRLGVEGTGRFRIHAPLMRLTKAEIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L +H+CY G C C +C LR KG+ E
Sbjct: 175 KGLALG----VDYGL--THSCY-----DPSPAGVACGLCDSCRLRLKGFAE 214
>gi|50085674|ref|YP_047184.1| hypothetical protein ACIAD2601 [Acinetobacter sp. ADP1]
gi|81392613|sp|Q6F9A3|QUEC_ACIAD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|49531650|emb|CAG69362.1| Queuosine biosynthesis protein queC [Acinetobacter sp. ADP1]
Length = 229
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 122/241 (50%), Gaps = 32/241 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN P A++L SGG DS+TCL+WA R++ + LSF YGQR+ EL+ K I
Sbjct: 1 MNGEFGMRPRAIVLLSGGLDSTTCLAWAQARYECM-ALSFMYGQRSTTELD----AAKAI 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLV 117
+ + G +H + L ++ S+LT +V ++Q+ +P T+VP RN IFL
Sbjct: 56 AQ-------NAGVEHRVINIDLANLGGSALTDHNIDVPEQLQEG-IPVTYVPARNTIFLS 107
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPL 172
+A A G IVIGV DYSGYPDCR + I+A L ++ V T TPL
Sbjct: 108 YALAAAEVFGAEAIVIGVNAVDYSGYPDCRPEYIQAFTNMARLATKAGVEGKPLTFETPL 167
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K +L + G + ++ +CY R C C +C LR++G++
Sbjct: 168 LHLSKANIIRLGIEHG------VDYSQTVSCYQADAQGR-----ACGKCDSCRLRKQGFI 216
Query: 233 E 233
E
Sbjct: 217 E 217
>gi|269468715|gb|EEZ80340.1| PP-loop superfamily ATPase [uncultured SUP05 cluster bacterium]
Length = 228
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 118/229 (51%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LSFDYGQ+ K EL + K+
Sbjct: 9 AIVLLSGGLDSTTALAIAKSQGFECYALSFDYGQKQKSELNSAKKIAKQF---------D 59
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMK--IQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E I+ ++ L D S+LT KN+A+ Q + +P T+VP RN IFL +A A L
Sbjct: 60 ATEHRIMSIS-LSDFGGSALTDKNIAVPDFKQSDEIPITYVPARNTIFLSYALAWAEVLE 118
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETWK 182
+I IGV TDYSGYPDCR + I A E NL G+E +TVHTPL+ L K +
Sbjct: 119 SQSIFIGVNSTDYSGYPDCRQEYITAFEIMANLATKQGIEGQKITVHTPLINLDKSQIIT 178
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G ++ L + TCY + G C +C AC R++G+
Sbjct: 179 QGLSLG----IDYSL--TTTCYQADNE-----GKACGTCDACEYRKQGF 216
>gi|78224267|ref|YP_386014.1| ExsB [Geobacter metallireducens GS-15]
gi|110816228|sp|Q39R35|QUEC_GEOMG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78195522|gb|ABB33289.1| preQ(0) biosynthesis protein QueC [Geobacter metallireducens GS-15]
Length = 237
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 116/231 (50%), Gaps = 29/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TCL+ A +SF YGQR+ VELE + +
Sbjct: 5 AVVLYSGGLDSTTCLAIARAEGYEPYAMSFSYGQRHSVELE----------QAKRNARPM 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
DH++ + S+LT ++A+ + +++P T+VP RN +FL FA A LG
Sbjct: 55 GAVDHLVVEFDYRQVGGSALTSDIAVPKEGVGSDIPVTYVPARNTVFLSFALGWAEVLGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + I A E NL ++ V +HTPL+ L K E +
Sbjct: 115 FDIFIGVNALDYSGYPDCRPEYIAAFEAMANLATKAGVEGKGRFRIHTPLIHLTKAEIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G + +H+CY D E G C C +C LR KG+ E
Sbjct: 175 KGLSLG------VDYGRTHSCY----DPTPE-GLACGLCDSCRLRLKGFAE 214
>gi|302558409|ref|ZP_07310751.1| exsB protein [Streptomyces griseoflavus Tu4000]
gi|302476027|gb|EFL39120.1| exsB protein [Streptomyces griseoflavus Tu4000]
Length = 231
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 119/236 (50%), Gaps = 34/236 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A D+ LSF YGQR+ +ELE K++ E+ +
Sbjct: 5 AIVLLSGGLDSTTVLAIAKDQGFTPYALSFRYGQRHSIELEAA----KRVAEVQGVAR-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-------IQDNNLPNTFVPGRNIIFLVFAATLA 123
H++ L S+LT ++ + ++D +P T+VP RN IFL FA A
Sbjct: 59 ----HVIADIDLRVFGGSALTADIEVPKHESLDDVEDGGVPITYVPARNTIFLSFALAFA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME--SHVTVHTPLMWLKK 177
+G ++I GV DYSGYPDCR + + A T NL G+E S +T+H+PL+ + K
Sbjct: 115 ETVGASDIFTGVTAVDYSGYPDCRPEYMDAFATMANLATRAGVEGISRMTLHSPLIAMSK 174
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + +G V+ L S CY + G C C C LR KG+ E
Sbjct: 175 ADIVREGLRLG----VDYSLTSS--CY-----NPDDQGQACGKCDTCLLRLKGFAE 219
>gi|220926070|ref|YP_002501372.1| exsB protein [Methylobacterium nodulans ORS 2060]
gi|219950677|gb|ACL61069.1| exsB protein [Methylobacterium nodulans ORS 2060]
Length = 251
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV----ELMPK 66
AL++ SGGQDS+TCL WA +FD V L+FDYGQR+ ELE + V K E++ K
Sbjct: 4 ALVVLSGGQDSTTCLFWAKQQFDEVHALTFDYGQRHARELEAAVTVAKMAGVASHEVL-K 62
Query: 67 WKDSLGEDHIL--PLAILGD-ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
D L L P A L S+ + + + +++ TFVP RN +FL AA A
Sbjct: 63 LPDLLRSTSPLVDPGAALEQYASYEQMEETIGDRVE-----LTFVPMRNALFLTIAANRA 117
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWLKKYETWK 182
L N+V GVC+ D + YPDCR D + A + IN + +HTPLM L K ET K
Sbjct: 118 VALDCFNLVTGVCQQDNANYPDCRLDFVLAQQGTINQALGVGRFRIHTPLMHLTKAETVK 177
Query: 183 LAQDIGGQDLVNLILEESHTCYLG 206
LA + G L SHT Y G
Sbjct: 178 LAGSLPG---CWEALAYSHTAYDG 198
>gi|86742063|ref|YP_482463.1| ExsB [Frankia sp. CcI3]
gi|110816226|sp|Q2J7K8|QUEC_FRASC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|86568925|gb|ABD12734.1| preQ(0) biosynthesis protein QueC [Frankia sp. CcI3]
Length = 236
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 113/231 (48%), Gaps = 24/231 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P+A++L SGG DS+T L+ A + LSF YGQR++VEL V + +
Sbjct: 15 PAAVVLLSGGLDSATVLAIANQQGFACHALSFRYGQRHEVELAAARRVASALGVVRHVVV 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D + L + G + + T V +P T+VP RN IFL F LA G
Sbjct: 75 D-------IDLGVFGGSALTDPTIAVPAAGTAEEIPVTYVPARNTIFLSFGLALAETAGA 127
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
++ IG DYSGYPDCR + + A + NL ++ V +VH PLM L K +T +
Sbjct: 128 WDVFIGASSVDYSGYPDCRPEYLAAYQAMANLATKATVSGERTLSVHAPLMHLSKADTIR 187
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L +G V+ L +H+CY D R C C +C LR++G+ E
Sbjct: 188 LGLSLG----VDYGL--THSCYDPGPDGRP-----CGRCDSCSLRERGFTE 227
>gi|90417120|ref|ZP_01225048.1| exsB protein [marine gamma proteobacterium HTCC2207]
gi|90331136|gb|EAS46392.1| exsB protein [marine gamma proteobacterium HTCC2207]
Length = 226
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 117/231 (50%), Gaps = 28/231 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A++L SGG DS+T ++ A + TLSFDYGQR++ EL +KI ELM
Sbjct: 2 AKKAVILVSGGLDSTTVVAMAKSQGYDCYTLSFDYGQRHRSEL----VAAQKISELMTVH 57
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H + LG I S+LT + + + +P T+VP RN +FL A A
Sbjct: 58 A------HKVVKLDLGSIGGSALTDSSIEVPETETTGIPVTYVPARNTVFLSIALGWAEV 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
LG +I +GV DYSGYPDCR + I+A ET NL ++ V T+H PL+ L K +
Sbjct: 112 LGANDIFLGVNAVDYSGYPDCRPEYIKAFETMANLATKAAVEGQKLTIHAPLIDLTKGQI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + G D N + +CY + G C C +C LR++G+
Sbjct: 172 VEAGMAL-GVDYSNTV-----SCYQANLE-----GEACGKCESCRLRRQGF 211
>gi|149175149|ref|ZP_01853772.1| ExsB [Planctomyces maris DSM 8797]
gi|148846127|gb|EDL60467.1| ExsB [Planctomyces maris DSM 8797]
Length = 233
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 121/241 (50%), Gaps = 31/241 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-----CRLCVRK 58
+ + P A++L SGG DS+T L+ A D + LSFDYGQR++ ELE C+ K
Sbjct: 1 MTTEVPKAVVLVSGGLDSATTLAIAADAGFELYALSFDYGQRHRHELEAAKKVCQAFDVK 60
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
K V + P G A+ DI + K+ + + +P T+VP RN +FL
Sbjct: 61 KFV-IFPLDLRVFGGS-----ALTADID---VPKDRSEHDLETGIPITYVPARNTVFLSL 111
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPL 172
A A L ++ IGV DYSGYPDCR + I A +T +L ++ H +HTPL
Sbjct: 112 ALAWAETLNAYDLFIGVNAVDYSGYPDCRPEFISAFQTVASLATKTGVEHSGHWKIHTPL 171
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ LKK + K ++G V+ L +H+CY D G C C +C LR KG+
Sbjct: 172 ISLKKADIIKTGMELG----VDYGL--THSCYDPLPD-----GTPCGHCDSCQLRAKGFA 220
Query: 233 E 233
E
Sbjct: 221 E 221
>gi|41019306|gb|AAR98564.1| GntR [Micromonospora echinospora]
gi|85814031|emb|CAF31447.1| putative gentamicin production protein [Micromonospora echinospora]
Length = 245
Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 119/238 (50%), Gaps = 37/238 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A+ LSF YGQR+ VELE V K +
Sbjct: 20 AVVLLSGGLDSATVLAMAVHEGYEAHALSFRYGQRHTVELEAAARVAK-----------A 68
Query: 71 LGED-HILPLAILGDISHSSLTKN-VAMKIQD------NNLPNTFVPGRNIIFLVFAATL 122
LG H++ L S+LT + +A+ D + +P T+VP RN IFL FA
Sbjct: 69 LGATRHVVADIDLRVFGGSALTDDTLAVPHHDSADELGDEIPVTYVPARNTIFLSFALAW 128
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLK 176
A L ++I IGV DYSGYPDCR + + A ET NL ++ V +HTPL+ L
Sbjct: 129 AETLDASDIFIGVSALDYSGYPDCRPEYVAAYETMANLATKAGVEGRQRLRIHTPLIQLT 188
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K ET + ++G + +H+CY D R C SC +C LR +G+ E
Sbjct: 189 KAETIRRGLELG------VDYAWTHSCY-DPVDGR-----ACGSCDSCLLRGRGFAEL 234
>gi|88800188|ref|ZP_01115756.1| exsB protein [Reinekea sp. MED297]
gi|88777034|gb|EAR08241.1| exsB protein [Reinekea sp. MED297]
Length = 227
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 116/230 (50%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A V LSFDYGQR+ EL+ +KI
Sbjct: 8 AVVLLSGGLDSTTVLAKAKADGCEVYALSFDYGQRHDSELD----AARKIA-----ANAQ 58
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E I+P+ L I S+LT + + + +P T+VP RN +FL A A +
Sbjct: 59 VAEHKIVPMN-LRSIGGSALTDDAIDVPEQESEGIPATYVPARNTVFLSIALGWAEVIDA 117
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMES-HVTVHTPLMWLKKYETWKL 183
I IGV DYSGYPDCR + I A ET NL G+E V + TPL+ L K +T KL
Sbjct: 118 DAIYIGVSAVDYSGYPDCRPEYIEAYETLANLATKRGVEGRRVEIRTPLINLTKADTVKL 177
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
Q +G + E+ +CY + G C C +C LR+KG+ +
Sbjct: 178 GQSLG------VDYAETVSCYQANAN-----GEACGVCDSCRLRKKGFAD 216
>gi|320355234|ref|YP_004196573.1| preQ(0) biosynthesis protein QueC [Desulfobulbus propionicus DSM
2032]
gi|320123736|gb|ADW19282.1| preQ(0) biosynthesis protein QueC [Desulfobulbus propionicus DSM
2032]
Length = 229
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 119/234 (50%), Gaps = 33/234 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A LSF YGQR VEL+ R +++ +
Sbjct: 6 AVVLLSGGLDSTTVLAIAQSLGFTCNCLSFQYGQRQSVELD-----RARVIGRLAGVAR- 59
Query: 71 LGEDHILPLAILGDISHSSLT------KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
H++ L I S+LT K+ + + ++P T+VPGRNI+FL A + A
Sbjct: 60 ----HLVLRVDLDAIGGSALTTAIEVPKDRPLNEMEQDIPVTYVPGRNILFLAHALSWAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
LG+++I +G+ DYSGYPDCR ++A E NLG ++ T +H PL+ L K E
Sbjct: 116 VLGVSDIFLGINAVDYSGYPDCRPQFLQAFEQMANLGTKAGTTGRPFRLHAPLIQLSKKE 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
++G V+ L +H+CY DK C C AC LR +G+ E
Sbjct: 176 IILKGMELG----VDYSL--THSCYDPAGDK------ACGRCDACQLRLQGFRE 217
>gi|226952146|ref|ZP_03822610.1| ExsB family protein [Acinetobacter sp. ATCC 27244]
gi|294651042|ref|ZP_06728381.1| trans-regulatory protein ExsB [Acinetobacter haemolyticus ATCC
19194]
gi|226837108|gb|EEH69491.1| ExsB family protein [Acinetobacter sp. ATCC 27244]
gi|292823055|gb|EFF81919.1| trans-regulatory protein ExsB [Acinetobacter haemolyticus ATCC
19194]
Length = 226
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 117/231 (50%), Gaps = 32/231 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+WA R+D V +SF YGQR+ EL+ + ++
Sbjct: 9 AIVLLSGGLDSTTCLAWAQARYDCV-AISFMYGQRSTTELDAAKALAQRA---------- 57
Query: 71 LGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G +H + LG++ S+LT +V ++Q+ +P T+VP RN IFL +A A
Sbjct: 58 -GVEHRVINIDLGNLGGSALTDHNIDVPEQLQEG-IPVTYVPARNTIFLSYALAAAEVFD 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
IVIGV DYSGYPDCR + I A L ++ V + TPL+ L K +
Sbjct: 116 AEAIVIGVNAVDYSGYPDCRPEFIDAFANLARLATKAGVEGKPLKIETPLLHLSKANIIR 175
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L + G + ++ +CY G C C +C LRQ+G++E
Sbjct: 176 LGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRQQGFIE 215
>gi|77920572|ref|YP_358387.1| putative transcriptional regulator [Pelobacter carbinolicus DSM
2380]
gi|110816239|sp|Q3A090|QUEC_PELCD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|77546655|gb|ABA90217.1| preQ(0) biosynthesis protein QueC [Pelobacter carbinolicus DSM
2380]
Length = 230
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 119/232 (51%), Gaps = 30/232 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TCL+ A LSF YGQR+ VELE K P+ +
Sbjct: 5 AVVLYSGGLDSTTCLAEARAAGFTPYALSFHYGQRHTVELE-------KARLYAPQVGAA 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
DH++ L I S+LT + + + D+ +P T+VP RN IFL FA A LG
Sbjct: 58 ---DHMVIDFDLRRIGGSALTSDEEVPKGREIDDAIPVTYVPARNTIFLSFALGWAEVLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKYETW 181
+I IGV DYSGYPDCR + I A E NL ++ V VH PL+ L K +
Sbjct: 115 SFDIFIGVNALDYSGYPDCRPEFISAFEQLANLATKAGVEGQGQYRVHAPLLHLTKAQII 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K ++G V+ L +H+CY D E G C C +C LR KG+ E
Sbjct: 175 KRGLELG----VDYSL--THSCY----DPTPE-GLACGLCDSCQLRLKGFAE 215
>gi|158520513|ref|YP_001528383.1| exsB protein [Desulfococcus oleovorans Hxd3]
gi|158509339|gb|ABW66306.1| exsB protein [Desulfococcus oleovorans Hxd3]
Length = 228
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 30/232 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A+ + V +L+FDYGQR++ EL V + +
Sbjct: 8 AVVLSSGGIDSTTAMAMAVSQGFSVFSLTFDYGQRHRHELSAARAVARHLN--------- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E H++ I S+LT ++ + +N +P T+VP RN IFL +A A L
Sbjct: 59 -AEKHLVLETDFRKIGGSALTADIPVPGTGPVENTIPVTYVPARNTIFLAYALAWAETLD 117
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETW 181
+I IGV DYSGYPDCR + I A NLG ++ V VHTPL+ + K E
Sbjct: 118 AADIFIGVNAVDYSGYPDCRPEYIEAFARVANLGSKAGVEGRITFAVHTPLIHMTKAEII 177
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G V+ + S CY D E G C C +C +R+KG+++
Sbjct: 178 RTGAALG----VDYSITSS--CY----DPSPE-GLACGLCDSCRIRKKGFVD 218
>gi|87201149|ref|YP_498406.1| ExsB [Novosphingobium aromaticivorans DSM 12444]
gi|110816238|sp|Q2G3K1|QUEC_NOVAD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|87136830|gb|ABD27572.1| preQ(0) biosynthesis protein QueC [Novosphingobium aromaticivorans
DSM 12444]
Length = 233
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 118/240 (49%), Gaps = 30/240 (12%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N AP A++L SGG DS C A ++ RV L+ DY QR++VEL+ + ++
Sbjct: 4 NSPAPDAPLAVVLLSGGLDSMVCAGLAQEQGFRVLALTIDYNQRHRVELDAARAIAARLG 63
Query: 62 ELMPKWKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVF 118
E H ILPL L S+LT ++A+ +++P T+VP RN+IFL
Sbjct: 64 V----------ERHVILPLD-LRQFGGSALTADIAVPKDGVGDDIPVTYVPARNLIFLSL 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGMESH-VTVHTPLM 173
A A G ++ IGV DYSGYPDCR + + E A +G E VTVH PL
Sbjct: 113 ALAWAEAAGSKDLFIGVNALDYSGYPDCRPEFVAGFEDLARIATKVGSEGGTVTVHAPLQ 172
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
LKK E + A +G L +S +CY D R C C +C LR+ G+ E
Sbjct: 173 HLKKSEIAREAARLG------LEAGDSWSCYDPLPDGR-----ACGVCDSCRLRRAGFEE 221
>gi|33862247|ref|NP_893808.1| ATPase [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|81575506|sp|Q7UZH5|QUEC_PROMP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33634465|emb|CAE20150.1| hypothetical ATPase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 224
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 122/238 (51%), Gaps = 28/238 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMP 65
K SA++L SGG DSST A ++ LSFDYGQR+K EL+ + +E
Sbjct: 4 KNKSAVILLSGGLDSSTVTGLAKASKAKIFGLSFDYGQRHKKELDSAFTIANHFEIEEFK 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAY 124
K L L++ G S + + K++ + IQ N +PNT+VPGRN IF+ A + A
Sbjct: 64 IVK--------LDLSLWGGSSLTDIKKDLPIDGIQQNTIPNTYVPGRNTIFISVALSYAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPLMWLKKYE 179
+ I +GV DYSGYPDCR D I+ + NL E+ + + TPL+ L K +
Sbjct: 116 AINADLIGLGVNALDYSGYPDCRPDYIKKFQELANLANKRGREENPIKLWTPLLDLNKED 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+LA D N+ LE++ +CY G + C C +C +RQ + +++ K
Sbjct: 176 IIQLAFD------NNVPLEKTWSCYSGNLEP-------CGKCDSCRIRQTAYKKWQIK 220
>gi|114776302|ref|ZP_01451347.1| exsB protein [Mariprofundus ferrooxydans PV-1]
gi|114553132|gb|EAU55530.1| exsB protein [Mariprofundus ferrooxydans PV-1]
Length = 230
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 32/237 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L+WA+ + + T++FDYGQR+++EL+ +
Sbjct: 8 AVVLLSGGLDSSTALAWAVRKMGWQCHTVAFDYGQRHRIELDASAAI-----------AH 56
Query: 70 SLG-EDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
S G DH + L I HS+LT + + +P+T+VP RN+IFL AA LA
Sbjct: 57 SFGVTDHRVISVDLRAIGHSALTSATPVPKDEAGHAGIPSTYVPARNLIFLSLAAGLAEA 116
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYET 180
+ T +VIG DYSGYPDCR + + A LG ++ + + PL+ L K E
Sbjct: 117 VCATRLVIGANVVDYSGYPDCRQEFLDAFVRTALLGTKAGSEGGDLQIAAPLIQLGKAEI 176
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+L D+G L + +CY G C C +CY R++G+ + +
Sbjct: 177 IELGLDLG------LDYGLTRSCY-----DPLPGGSPCGHCDSCYYRRQGFEQLGRQ 222
>gi|222053803|ref|YP_002536165.1| exsB protein [Geobacter sp. FRC-32]
gi|254764349|sp|B9M0M7|QUEC_GEOSF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|221563092|gb|ACM19064.1| exsB protein [Geobacter sp. FRC-32]
Length = 229
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TC++ A + +SFDYGQR+ VEL K +
Sbjct: 5 AVILYSGGLDSTTCMAIAREEGFEPYAMSFDYGQRHSVELATAKANAKTMG--------- 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+H++ L + S+LT ++ + + +P T+VP RN IFL FA A LG
Sbjct: 56 -ASEHLVVSFDLRKVGGSALTADLDVPKEGIGAGIPVTYVPARNTIFLSFALGWAEVLGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + I A E NL + V +H PL+ + K E +
Sbjct: 115 FDIFIGVNALDYSGYPDCRPEYIAAFEATANLATRAGVEGTGRFVIHAPLIAMTKAEIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G + +H+CY D E G C C +C LR KG+ E
Sbjct: 175 KGLALG------VDYGRTHSCY----DPTPE-GLACGLCDSCRLRLKGFAE 214
>gi|118579716|ref|YP_900966.1| exsB protein [Pelobacter propionicus DSM 2379]
gi|171704444|sp|A1ANI8|QUEC_PELPD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118502426|gb|ABK98908.1| preQ(0) biosynthesis protein QueC [Pelobacter propionicus DSM 2379]
Length = 226
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 29/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L+SGG DS+TCL+ A +SF YGQR+ ELE + + +
Sbjct: 5 AVVLYSGGLDSTTCLAMAKADGFAPYAMSFSYGQRHGFELEVAKANARPLGAV------- 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+H++ L + S+LT ++++ + +++P T+VP RN IFL FA A LG
Sbjct: 58 ---EHLVVDFDLRRMGGSALTDDISVPKEGVGSDIPVTYVPARNTIFLSFALGWAEVLGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + + A E NL +S H ++ TPL+ + K E K
Sbjct: 115 FDIYIGVNSLDYSGYPDCRPEFVSAFEALANLATKSGVEGQGHFSIRTPLINMTKAEIIK 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G + +H+CY + D G C C +C LR KG+ E
Sbjct: 175 AGVALG------VDYSWTHSCYDPESD-----GTSCGRCDSCRLRLKGFAE 214
>gi|224038929|gb|ACN38358.1| transcription regulator related protein [Micromonospora inyonensis]
Length = 236
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 117/239 (48%), Gaps = 39/239 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI---------V 61
A++L SGG DS+T L+ A+ LSF YGQR+ VELE V K + +
Sbjct: 11 AVVLLSGGLDSATVLAMAVHEGYEAHALSFRYGQRHTVELEAAARVAKALGATRHVVADI 70
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L +L +D ++ + H + + + +P T+VP RN IFL FA
Sbjct: 71 DLRVFGGSALTDDTLV-------VPHHASADEMG-----DEIPVTYVPARNTIFLSFALA 118
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWL 175
A L ++I IGV DYSGYPDCR + + A ET NL ++ V +HTPL+ L
Sbjct: 119 WAETLDASDIFIGVSALDYSGYPDCRPEYVAAYETMANLATKAGVEGRQRLRIHTPLIQL 178
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K ET + ++G + +H+CY D R C +C +C LR +G+ E
Sbjct: 179 TKAETIRRGLEMG------VDYAWTHSCY-DPVDGR-----ACGTCDSCLLRGRGFAEL 225
>gi|108758889|ref|YP_634541.1| exsB protein [Myxococcus xanthus DK 1622]
gi|118574291|sp|Q1CYI2|QUEC_MYXXD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|108462769|gb|ABF87954.1| exsB protein [Myxococcus xanthus DK 1622]
Length = 230
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 119/235 (50%), Gaps = 34/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + L+ YGQR+ VELE K +
Sbjct: 5 AVVLISGGLDSTTCLAMAKAKGFEPVCLAVAYGQRHAVELE-----------QARKVAAA 53
Query: 71 LGEDHILPLAI-LGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLVFAATLA 123
+G ++I L + S+LT ++ + + +P T+VP RN +FL A LA
Sbjct: 54 MGVTDFRVVSIDLRQVGGSALTADIEVPKDRPSDEMSHGIPVTYVPARNALFLSLALGLA 113
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHTPLMWLKKY 178
+G T+I IGV DYSGYPDCR + IR+ E+ NL G+E +H TVH PL L K
Sbjct: 114 EVVGSTDIYIGVNAVDYSGYPDCRPEFIRSFESMANLATKAGVEGAHFTVHAPLSGLTKA 173
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + +G V+ L +H+CY G C C +C LR+KG+ E
Sbjct: 174 DIIREGVKLG----VDYGL--THSCY-----DPDAQGRACGRCDSCVLRKKGFEE 217
>gi|302343484|ref|YP_003808013.1| exsB protein [Desulfarculus baarsii DSM 2075]
gi|301640097|gb|ADK85419.1| exsB protein [Desulfarculus baarsii DSM 2075]
Length = 234
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 118/239 (49%), Gaps = 33/239 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+ A D+ LSF YGQR+ VEL +++ + + +
Sbjct: 8 PPAVVLLSGGLDSATCLAMANDQGFEPHALSFRYGQRHAVEL----LAAQRVAQALGARR 63
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA------MKIQDNNLPNTFVPGRNIIFLVFAATL 122
H++ L + S+LT ++A + + +P T+VP RN +FL A
Sbjct: 64 ------HLILDVDLRGVGGSALTADMAVPKGRSLAEMTDGVPVTYVPARNTLFLSLALAW 117
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLK 176
A L +I IGV DYSGYPDCR + I A E NL + ++ VH PL+ +
Sbjct: 118 AETLDCADIFIGVNALDYSGYPDCRPEFILAFENLANLATKMSTEQGRYIRVHAPLIRMT 177
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + +G V+ L +H+CY D G C C +C LR KG+ E K
Sbjct: 178 KAQIIRAGLALG----VDYGL--THSCYDPDAD-----GKPCGQCDSCLLRAKGFAEAK 225
>gi|218781986|ref|YP_002433304.1| exsB protein [Desulfatibacillum alkenivorans AK-01]
gi|254764330|sp|B8FMW6|QUEC_DESAA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218763370|gb|ACL05836.1| exsB protein [Desulfatibacillum alkenivorans AK-01]
Length = 233
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN I K+ A++L SGG DS+T ++ A D +V LSF YGQR+ ELE K++
Sbjct: 1 MNAIQKE--KAVVLLSGGLDSATAMAIAKDMGFQVYALSFSYGQRHTTELE----AAKRV 54
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + + + + + + K A + + +P T+VP RN IFL FA
Sbjct: 55 AKTLGAVEHQVANIDLTCFGGSALTADLDVPKGRAPEDMEKEIPVTYVPARNTIFLSFAL 114
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME--SHVTVHTPLMW 174
A L ++I IGV DYSGYPDCR + I+A NL G+E + + +HTPL+
Sbjct: 115 AWAEVLETSHIFIGVNAVDYSGYPDCRPEYIQAFTAMANLATKAGVEGRTKIEIHTPLID 174
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K + + +G V+ L +H+CY D E G C C +C LR+KG+ E
Sbjct: 175 LTKAQIIQKGIALG----VDYGL--THSCY----DPSPE-GLACGQCDSCLLRKKGFAE 222
>gi|284028808|ref|YP_003378739.1| exsB protein [Kribbella flavida DSM 17836]
gi|283808101|gb|ADB29940.1| exsB protein [Kribbella flavida DSM 17836]
Length = 235
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 119/234 (50%), Gaps = 32/234 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A LSF YGQR+ VEL ++ E +
Sbjct: 11 AVVLLSGGLDSTTVLAIARSEGFTPYALSFRYGQRHVVEL----AAATRVAEAQGVARHV 66
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAY 124
+ + + L + G S+LT ++ + D+ ++P T+VP RN IFL FA A
Sbjct: 67 IAD---IDLRVFGG---SALTSDIDVPKHDDVSDVDESIPLTYVPARNTIFLSFALAYAE 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
+G ++ IGV DYSGYPDCR + I A E NL G++ H + +HTPL+ + K +
Sbjct: 121 TVGAIDVFIGVSALDYSGYPDCRPEYIEAYEAMANLATRAGVDGHRLKIHTPLIEMTKGQ 180
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
T +L +G V+ L S CY D R C C +C LR+KG+ E
Sbjct: 181 TVELGLKLG----VDYALTSS--CYDPDLDGR-----PCGHCDSCLLRRKGFAE 223
>gi|83313120|ref|YP_423384.1| PP-loop superfamily ATPase [Magnetospirillum magneticum AMB-1]
gi|110816230|sp|Q2W000|QUEC_MAGSA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|82947961|dbj|BAE52825.1| Predicted PP-loop superfamily ATPase [Magnetospirillum magneticum
AMB-1]
Length = 227
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 112/235 (47%), Gaps = 34/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A L+F YGQR+ VE+ + +
Sbjct: 4 AIVLLSGGLDSATVLAIAKAEGFAPAALTFRYGQRHAVEIRA-----------AERVAAA 52
Query: 71 LG-EDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAATLA 123
LG DH + L S+LT ++A+ + +P T+VP RN I L FA A
Sbjct: 53 LGIRDHRIADIDLRVFGGSALTSDIAVPKGELDEAIPAGIPVTYVPARNTIMLSFALAFA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKY 178
LG +I +GV DYSGYPDCR D I+A E NL ++ V T+HTPL+ L K
Sbjct: 113 EVLGAADIFVGVNAVDYSGYPDCRPDYIKAFEAMANLATKAAVEGTRLTIHTPLIDLTKG 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + D+G + + TCY D G C C +C LR KG+ E
Sbjct: 173 QIIRRGLDLG------VDYSITSTCYDPTPD-----GKACGHCDSCRLRLKGFAE 216
>gi|301063542|ref|ZP_07204068.1| protein ExsB [delta proteobacterium NaphS2]
gi|300442351|gb|EFK06590.1| protein ExsB [delta proteobacterium NaphS2]
Length = 228
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 119/236 (50%), Gaps = 35/236 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T + A V L+F YGQR+ VEL+ K +
Sbjct: 8 AVVLLSGGLDSTTVAAIACSEGYDVFALTFRYGQRHAVELKA-----------AEKVAHN 56
Query: 71 LG-EDHILPLAILGDISHSSLTKNV------AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG +H++ L I S+LT ++ ++ + +P T+VP RN IFL +A A
Sbjct: 57 LGLTEHLIVDLDLRKIGGSALTDHIDVPKRRGAELSEEEIPVTYVPARNTIFLSYALAWA 116
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKK 177
LG NI IGV DYSGYPDCR + I+A E NL ++ VT + TP++++ K
Sbjct: 117 EVLGAWNIFIGVNAVDYSGYPDCRAEFIKAFEEMANLATKAGVTLTRRLKIRTPVIYMSK 176
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ K +G V+ L +H+CY D G C C +C LR+KG+ E
Sbjct: 177 GDIIKTGLKLG----VDYTL--THSCYDPSPD-----GKACGLCDSCLLRKKGFEE 221
>gi|331007034|ref|ZP_08330268.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC1989]
gi|330419161|gb|EGG93593.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC1989]
Length = 243
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 121/231 (52%), Gaps = 30/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + TLSFDYGQR++ EL + + +++ K +
Sbjct: 25 AVILVSGGLDSTTVLAIAQSQGYDCYTLSFDYGQRHRAEL---VAAERLSLKMGAKEHKT 81
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ IL L +G S+LT + A+ + ++ +P T+VP RN +FL A A LG
Sbjct: 82 V----ILDLRTIG---GSALTDD-AIDVPESASEGIPVTYVPARNTVFLSIALGWAEVLG 133
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR D I+A E NL ++ V + TPL+ L K E +
Sbjct: 134 ANDIFIGVNAVDYSGYPDCRLDYIKAYEQMANLATKACVEGRPLRIQTPLIDLSKAEIIR 193
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
++G + E+ +CY D G C C +C LRQ+G+ E
Sbjct: 194 QGVELG------IDYAETISCYQANAD-----GDACGKCDSCRLRQQGFAE 233
>gi|119896704|ref|YP_931917.1| ExsB protein [Azoarcus sp. BH72]
gi|189038894|sp|A1K2H5|QUEC_AZOSB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119669117|emb|CAL93030.1| conserved hypothetical ExsB protein [Azoarcus sp. BH72]
Length = 228
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 111/231 (48%), Gaps = 29/231 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+ A D LS YGQR+ EL +++ +
Sbjct: 5 PRAVVLLSGGLDSATCLAIARDMGLETYALSVAYGQRHAAELT----ASRRVAHALGA-- 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
+H + LG+ S+LT +D +P T+VP RN + L A A
Sbjct: 59 ----REHRVASVSLGEFGGSALTDPAIAVPEDAAPGGIPVTYVPARNTVMLSMALAWAEV 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYET 180
LG +I +GV DYSGYPDCR I+A ET NL G+E H T+H PL+ L K +
Sbjct: 115 LGARHIFVGVNAVDYSGYPDCRPAFIQAFETMANLATKAGVEGHPTTIHAPLIDLSKADI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G V+ L S CY D R C C AC LR++G+
Sbjct: 175 IRRGVALG----VDYGLTVS--CYQADDDGR-----ACGRCDACRLRREGF 214
>gi|52843081|ref|YP_096880.1| ExsB protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52630192|gb|AAU28933.1| ExsB protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 233
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 32/236 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I+KKA ++L SGG DS+TCL+ A + LSF YGQR+ EL C +I +
Sbjct: 5 IMKKA---VVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAEL----CAATRIAKH 57
Query: 64 MPKWKDSLGEDH---ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
M DH L +A+ G + + + V + +P T+VP RN IFL A
Sbjct: 58 MG------AADHKIVTLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWL 175
A +G +I IG DYS YPDCR + I + ++ NL ++ + T++ PL +L
Sbjct: 112 GYAESIGARDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K +T +L ++G V+ L S CY + E G C C +C R++G+
Sbjct: 172 SKVQTIQLGTELG----VDYGLTVS--CY-----QANEAGEACGQCDSCTFRKRGF 216
>gi|255320800|ref|ZP_05361975.1| ExsB protein [Acinetobacter radioresistens SK82]
gi|262379424|ref|ZP_06072580.1| queuosine biosynthesis protein queC [Acinetobacter radioresistens
SH164]
gi|255302177|gb|EET81419.1| ExsB protein [Acinetobacter radioresistens SK82]
gi|262298881|gb|EEY86794.1| queuosine biosynthesis protein queC [Acinetobacter radioresistens
SH164]
Length = 222
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 119/230 (51%), Gaps = 30/230 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+WA R++ + +SF YGQR+ EL+ + ++
Sbjct: 5 AIVLLSGGLDSTTCLAWAQARYECI-AISFMYGQRSTTELDAAKALTQR----------- 52
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAYRLGI 128
G +H + LG++ S+LT N+ + +Q+ + +P T+VP RN IFL +A A
Sbjct: 53 AGVEHRVINIDLGNLGGSALTDHNIDVPVQEQSGIPVTYVPARNTIFLSYALAAAEVFDA 112
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLMWLKKYETWKL 183
IVIG+ DYSGYPDCR + I A A +G+E + TPL+ L K +L
Sbjct: 113 EAIVIGINAVDYSGYPDCRPEFIEAFANMARLATKVGVEGKPLKFETPLLHLSKANIIRL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ G + ++ +CY + G C C +C LR++G+ E
Sbjct: 173 GIEHG------VDYSQTVSCYQAD-----DQGRACGQCDSCRLRKQGFQE 211
>gi|302392166|ref|YP_003827986.1| preQ(0) biosynthesis protein QueC [Acetohalobium arabaticum DSM
5501]
gi|302204243|gb|ADL12921.1| preQ(0) biosynthesis protein QueC [Acetohalobium arabaticum DSM
5501]
Length = 223
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 120/235 (51%), Gaps = 37/235 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++LFSGG DS+T L A + +V LSF YGQ + ELE K+I D
Sbjct: 4 AVVLFSGGLDSTTALYLAKSKGYQVYALSFKYGQSHSRELE----AAKRIA-------DQ 52
Query: 71 LG-EDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAY 124
+G +H++ L S+LT M I + +P T+VP RN+IFL +AA+ A
Sbjct: 53 VGVAEHVVVETSLSAWGGSALTDQ-EMDIPQGEKEREEIPTTYVPARNMIFLSYAASYAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKY 178
+G +I IGV E DYSGY DCR + I A+E AIN G ++ + + P + L K
Sbjct: 112 AVGAHDIFIGVSEVDYSGYVDCRQEFIDAMEEAINQGTVCGAEEDNPIKIQAPFINLTKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E +L ++G V+ L + +CY G+ C +C +C LR K + E
Sbjct: 172 EEIELGMELG----VDYSL--TWSCYRGEE-------LACGNCDSCMLRLKAFEE 213
>gi|307611759|emb|CBX01467.1| hypothetical protein LPW_31551 [Legionella pneumophila 130b]
Length = 228
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + LSF YGQR+ EL C +I + M
Sbjct: 4 AVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAEL----CAATRIAKHMG----- 54
Query: 71 LGEDH---ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
DH L +A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 55 -ASDHKIVTLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IG DYS YPDCR + I + ++ NL ++ + T++ PL +L K +T +
Sbjct: 114 ARDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQ 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L ++G V+ L S CY + E G C C +C R++G+
Sbjct: 174 LGTELG----VDYGLTVS--CY-----QANEAGEACGQCDSCTFRKRGF 211
>gi|54295711|ref|YP_128126.1| hypothetical protein lpl2799 [Legionella pneumophila str. Lens]
gi|81367596|sp|Q5WSS7|QUEC_LEGPL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|53755543|emb|CAH17042.1| hypothetical protein lpl2799 [Legionella pneumophila str. Lens]
Length = 228
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + LSF YGQR+ EL C +I + M
Sbjct: 4 AVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAEL----CAATRIAKHMG----- 54
Query: 71 LGEDH---ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
DH L +A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 55 -AADHKIVTLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IG DYS YPDCR + I + ++ NL ++ + T++ PL +L K +T +
Sbjct: 114 ARDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQ 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L ++G V+ L S CY + E G C C +C R++G+
Sbjct: 174 LGAELG----VDYGLTVS--CY-----QANEAGEACGQCDSCTFRKRGF 211
>gi|258512334|ref|YP_003185768.1| exsB protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257479060|gb|ACV59379.1| exsB protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 227
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 30/235 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++ SGG DS+TC+ A + ++FDYGQR+++ELE KK+
Sbjct: 4 AVVILSGGLDSATCMGIAHAAGYELCPITFDYGQRHRIELESA----KKVAAFY-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + I+ + L I S+LT +V + +P T+VPGRN++FL AA+ A +G
Sbjct: 55 VKDHRIVSIDFLRQIGGSALTDESIDVPTEGVSREIPVTYVPGRNLLFLAIAASYAEVIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
I IGV DYSGYPDCR + I +E + +G ++ V + TPL+ K E +
Sbjct: 115 AEAIYIGVNALDYSGYPDCRPEFIEGVEHVLRIGTKAGVEGRPIRIETPLLHWTKGEIVR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + E + +CY G C C +C LR KG+ E K
Sbjct: 175 KGLELG------VPYELTTSCYQGGE-------VACGECDSCRLRLKGFAEAGAK 216
>gi|304312905|ref|YP_003812503.1| ExsB protein [gamma proteobacterium HdN1]
gi|301798638|emb|CBL46870.1| ExsB protein [gamma proteobacterium HdN1]
Length = 233
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 115/235 (48%), Gaps = 29/235 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS+TCL+ A + V LSF YGQR+ VELE +++ +
Sbjct: 6 AAIVLLSGGLDSATCLALARQQGFDVYALSFSYGQRHSVELE----ASRRVAHALGATAH 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKI------QDNNLPNTFVPGRNIIFLVFAATLA 123
+ + LA G + + L+ +V + +P T+VP RN IFL +A A
Sbjct: 62 RIAN---IDLAAFGGSALTDLSIDVPVAAPNAPVDHSEEIPITYVPARNTIFLSYALAWA 118
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY 178
L +I IGV DYSGYPDCR + I A ET NL V +H PLM + K
Sbjct: 119 EVLESDDIFIGVNAVDYSGYPDCRLEFINAFETMANLATRRAVEGAKLHIHAPLMKMSKA 178
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ ++ +G + + +CY + G C +C +C LR++G+++
Sbjct: 179 QIIEVGVSLG------VDYGATISCYQAD-----DQGAACGACDSCRLRREGFLQ 222
>gi|262368583|ref|ZP_06061912.1| queuosine biosynthesis protein queC [Acinetobacter johnsonii SH046]
gi|262316261|gb|EEY97299.1| queuosine biosynthesis protein queC [Acinetobacter johnsonii SH046]
Length = 222
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 119/233 (51%), Gaps = 32/233 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+WA ++D LSF YGQR+ EL+ + KK
Sbjct: 3 PRAIVLLSGGLDSTTCLAWAQAQYD-CTALSFMYGQRSTTELDAARELTKKA-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYR 125
G +H + LG++ S+LT + ++ + D+ +P T+VP RN IFL +A A
Sbjct: 54 ---GVEHRVINIDLGNLGGSALTDH-SIDVPDHEQVGIPVTYVPARNTIFLSYALAAAEV 109
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLMWLKKYET 180
L IVIG+ DYSGYPDCR + I A A +G+E + TPL+ L K
Sbjct: 110 LDAEAIVIGINAVDYSGYPDCRPEFIEAFANMARLATKVGVEGKPLKFETPLLHLSKANI 169
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L + G + ++ +CY + G C C +C LR++G+ +
Sbjct: 170 IRLGIEHG------VDYSQTVSCYQAD-----DQGRACGKCDSCRLRKEGFAD 211
>gi|118574287|sp|Q5ZRJ5|QUEC_LEGPH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 228
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + LSF YGQR+ EL C +I + M
Sbjct: 4 AVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAEL----CAATRIAKHMG----- 54
Query: 71 LGEDH---ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
DH L +A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 55 -AADHKIVTLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IG DYS YPDCR + I + ++ NL ++ + T++ PL +L K +T +
Sbjct: 114 ARDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQ 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L ++G V+ L S CY + E G C C +C R++G+
Sbjct: 174 LGTELG----VDYGLTVS--CY-----QANEAGEACGQCDSCTFRKRGF 211
>gi|304408386|ref|ZP_07390033.1| exsB protein [Paenibacillus curdlanolyticus YK9]
gi|304342675|gb|EFM08522.1| exsB protein [Paenibacillus curdlanolyticus YK9]
Length = 240
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 125/240 (52%), Gaps = 30/240 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--------RK 58
K A+++ SGG DS+TC+ +A + + L+FDYGQR+++ELE V R
Sbjct: 5 KNKKAVIILSGGLDSTTCMGFAKEAGYELFPLTFDYGQRHRIELEKSRQVAEHYGVIDRY 64
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
K+++L + ++G + AI + + + + ++ ++ +P T+VPGRN +FL
Sbjct: 65 KVIKL--DFLRNIGGSALTDEAIA--VPKGTGVEQMDVEQAESEIPVTYVPGRNFMFLAI 120
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLM 173
A + A +G I IGV DYSGYPDCR + I +E A +G+E +++ TPL+
Sbjct: 121 ATSYAEAVGAEAIYIGVNALDYSGYPDCRPEFIAKVEEVMALATKVGVEGKPISIETPLI 180
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K + + +G + E + +CY G+ + C C +C LR KG+ E
Sbjct: 181 ALSKADIVREGVRMG------VPYELTTSCYNGEEE-------ACGECDSCVLRLKGFSE 227
>gi|218288779|ref|ZP_03493042.1| exsB protein [Alicyclobacillus acidocaldarius LAA1]
gi|218241137|gb|EED08313.1| exsB protein [Alicyclobacillus acidocaldarius LAA1]
Length = 227
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 30/235 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++ SGG DS+TC+ A + ++FDYGQR+++ELE KK+
Sbjct: 4 AVVILSGGLDSATCMGIAHASGYELCPITFDYGQRHRIELESA----KKVAAFY-----G 54
Query: 71 LGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + I+ + L I S+LT +V + +P T+VPGRN++FL AA+ A +G
Sbjct: 55 VKDHRIVSIDFLRQIGGSALTDESIDVPTEGVSREIPVTYVPGRNLLFLAIAASYAEVIG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
I IGV DYSGYPDCR + I +E + +G ++ V + TPL+ K E +
Sbjct: 115 AEAIYIGVNALDYSGYPDCRPEFIEGVEHVLRIGTKAGVEGRPIRIETPLLHWTKGEIVR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + E + +CY G C C +C LR KG+ E K
Sbjct: 175 KGLELG------VPYELTTSCYQGGD-------VACGECDSCRLRLKGFAEAGAK 216
>gi|254428689|ref|ZP_05042396.1| exsB protein [Alcanivorax sp. DG881]
gi|196194858|gb|EDX89817.1| exsB protein [Alcanivorax sp. DG881]
Length = 222
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 114/228 (50%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A D+ T++FDYGQR + EL+ + V + L +
Sbjct: 4 AVVLLSGGLDSATCLAIARDQGYECHTIAFDYGQRTRSELDAAVQVSGALGALSHR---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN--LPNTFVPGRNIIFLVFAATLAYRLGI 128
++ L +G+I S+LT + +D +P T+VP RN +FL A LA +
Sbjct: 60 -----VIELG-MGNIGGSALTDHSIDVPEDGGEGIPVTYVPARNTVFLSLALGLAEVVDA 113
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
I IGV DYSGYPDCR I A ++ NL ++ V + TPLM L K + +
Sbjct: 114 QAIFIGVNAVDYSGYPDCRPAFIEAFQSMANLATKAGVEGRPMQIETPLMHLSKAQIIQQ 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L + +CY + E G C C +C LR +G+
Sbjct: 174 GVALG------LDYGLTVSCY-----QADENGNACGKCDSCRLRSQGF 210
>gi|30248246|ref|NP_840316.1| ExsB protein [Nitrosomonas europaea ATCC 19718]
gi|81584822|sp|Q82XN5|QUEC_NITEU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|30180131|emb|CAD84133.1| ExsB protein [Nitrosomonas europaea ATCC 19718]
Length = 228
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 109/229 (47%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A LS DYGQR+ EL + + +
Sbjct: 4 AVVLLSGGMDSATTLAIARQSGFACYALSIDYGQRHVAELAAAARIGQSLQV-------- 55
Query: 71 LGEDHI---LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
DH L LA+L + ++ V + +P T+VP RN I L A A LG
Sbjct: 56 --SDHQFLKLDLAVLASSVLTDISATVPLHGTSTGIPVTYVPARNTIMLALALAWAEVLG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHV-TVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR D I A E NL G E V TVH PL+ L K E +
Sbjct: 114 SHDIFIGVTAVDYSGYPDCRRDYIDAFEKMANLATKAGREGMVLTVHAPLIDLPKREIIQ 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G ++ L S CY + E GY C C AC++R+ G+
Sbjct: 174 CGMELG----IDYGLTVS--CY-----QADEAGYACGQCDACHIRRAGF 211
>gi|88705615|ref|ZP_01103325.1| secreted protein [Congregibacter litoralis KT71]
gi|88700128|gb|EAQ97237.1| secreted protein [Congregibacter litoralis KT71]
Length = 226
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 119/235 (50%), Gaps = 28/235 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + A++L SGG DS+T L+ A ++ +LSFDYGQR++ EL V K + ++
Sbjct: 1 MNSSKKAVVLVSGGLDSTTVLALAREQGYECYSLSFDYGQRHRAELFAAERVSKTLGDV- 59
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQ-DNNLPNTFVPGRNIIFLVFAATL 122
+H + L I S+LT +N+A+ + +P T+VP RN +FL A
Sbjct: 60 ---------EHKVVRLNLDSIGGSALTDENIAVPEEASEGIPVTYVPARNTVFLSIALGW 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKK 177
A LG +I IGV DYSGYPDCR I A + N+ + V +HTPLM L K
Sbjct: 111 AEVLGAQDIFIGVNAVDYSGYPDCRPAFIDAFQQLANVATQVGVEGGRYEIHTPLMDLGK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ KL +G + ++ +CY D G C C AC LR++G++
Sbjct: 171 DDIVKLGARLG------VDYSQTVSCYQATDD-----GLACGVCDACRLRREGFV 214
>gi|161830778|ref|YP_001597812.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 331]
gi|189038913|sp|A9NBS5|QUEC_COXBR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|161762645|gb|ABX78287.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 331]
Length = 226
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 121/236 (51%), Gaps = 31/236 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + LSFDYGQ++ EL +KI +
Sbjct: 4 AVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSEL----VAAEKIAAHF-----N 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ L+I G + S+LT N ++ + D ++P T+VP RN IFL A A L
Sbjct: 55 VVRHEVVTLSI-GKLGGSALTDN-SLDVPDYGGNESIPITYVPARNTIFLSIALGWAEIL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETW 181
+I+IG DYSGYPDCR + I A + NL G+E H + + PL+ L K ET
Sbjct: 113 DAESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETI 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
KL +G + + +CY + E G C C +C LR+KG+ E + K
Sbjct: 173 KLGYSLGVDYSMTV------SCY-----RANEEGLACGYCDSCELRKKGFKEAEIK 217
>gi|292490345|ref|YP_003525784.1| exsB protein [Nitrosococcus halophilus Nc4]
gi|291578940|gb|ADE13397.1| exsB protein [Nitrosococcus halophilus Nc4]
Length = 224
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 119/234 (50%), Gaps = 28/234 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+P A++L SGG DS+T L+ A ++ T+SFDYGQR++VEL+ + + + +
Sbjct: 2 SSPKAVVLVSGGLDSATVLAIAREQEFACYTMSFDYGQRHRVELQAAAEISRLLGAV--- 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+H L LG + S+LT ++A+ + +P T+VP RN +FL FA A
Sbjct: 59 -------EHKLITIDLGGMGGSALTDSSIAVPEAPTEAIPVTYVPARNTVFLAFALGWAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
LG +I IGV DYSGYPDCR + A E NL G+E + PL+ L K E
Sbjct: 112 VLGAQDIFIGVNAVDYSGYPDCRPAFVEAFEHLANLATRAGLEGQRFRIQAPLIHLSKAE 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + L ++ S T + D E G C C +C R++G+ E
Sbjct: 172 IIR--------EGIRLGIDYSRTVSCYQAD---ETGRACGVCDSCRFRKQGFQE 214
>gi|88810548|ref|ZP_01125805.1| exsB protein [Nitrococcus mobilis Nb-231]
gi|88792178|gb|EAR23288.1| exsB protein [Nitrococcus mobilis Nb-231]
Length = 243
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 112/236 (47%), Gaps = 29/236 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ P A++L SGG DS+T L+ A + LSFDYGQR+ EL + K +
Sbjct: 3 ERHPRAVVLLSGGLDSTTTLAIAQAQGFCCFALSFDYGQRHASELSAGTAIAKAM----- 57
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM--KIQDNNLPNTFVPGRNIIFLVFAATLA 123
S+ E +L + L D+ S+LT + K +P T+VP RN IFL +A A
Sbjct: 58 ----SVAEHRVLRIG-LDDLGGSALTDVASPLPKPPSKGIPATYVPARNTIFLAYALAYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKK 177
L +I IGV DYSGYPDCR + I A E NL +S + TPL+ L K
Sbjct: 113 EVLQAHDIFIGVNAIDYSGYPDCRPEFITAFEHMANLATKSSAEDRSCYHISTPLIQLTK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E + +G + + +CY + G C C ACY R KG+ +
Sbjct: 173 AEIIQCGARLGVDYSITV------SCYNAD-----QIGRACGRCDACYYRAKGFRQ 217
>gi|299769137|ref|YP_003731163.1| hypothetical protein AOLE_04465 [Acinetobacter sp. DR1]
gi|298699225|gb|ADI89790.1| hypothetical protein AOLE_04465 [Acinetobacter sp. DR1]
Length = 222
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+WA R++ + +SF YGQR+ EL+ + ++
Sbjct: 3 PRAIVLLSGGLDSTTCLAWAQARYECI-AISFMYGQRSTTELDAAKALAQR--------- 52
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
G +H + L ++ S+LT N+A+ Q +P T+VP RN IFL +A A
Sbjct: 53 --AGVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSYALAAAEVF 110
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
IVIG+ DYSGYPDCR + I A L ++ V TPL+ L K
Sbjct: 111 NAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKANII 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L + G + ++ +CY R C C +C LR++G++E
Sbjct: 171 RLGIEHG------VDYSQTVSCYQADAQGR-----ACGKCDSCRLRKEGFIE 211
>gi|148361198|ref|YP_001252405.1| ExsB protein [Legionella pneumophila str. Corby]
gi|296108534|ref|YP_003620235.1| hypothetical protein lpa_04195 [Legionella pneumophila 2300/99
Alcoy]
gi|167016432|sp|A5II59|QUEC_LEGPC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148282971|gb|ABQ57059.1| ExsB protein [Legionella pneumophila str. Corby]
gi|295650436|gb|ADG26283.1| hypothetical protein lpa_04195 [Legionella pneumophila 2300/99
Alcoy]
Length = 228
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + LSF YGQR+ EL C +I + M
Sbjct: 4 AVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAEL----CAATRIAKHMD----- 54
Query: 71 LGEDH---ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
DH L A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 55 -AADHKIVTLDTALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IG DYS YPDCR + I + ++ NL ++ + T++ PL +L K +T +
Sbjct: 114 ARDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQ 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L ++G V+ L S CY + E G C C +C R++G+
Sbjct: 174 LGTELG----VDYGLTVS--CY-----QANEAGEACGQCDSCTFRKRGF 211
>gi|110816223|sp|Q83A28|QUEC_COXBU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 226
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 35/238 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL ++ +V
Sbjct: 4 AVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHFNVVRY----- 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAY 124
++ L+I G + S+LT N ++ + D ++P T+VP RN IFL A A
Sbjct: 59 ------EVVTLSI-GKLGGSALTDN-SLDVPDYGGNESIPITYVPARNTIFLSIALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
L +I+IG DYSGYPDCR + I A + NL G+E H + + PL+ L K E
Sbjct: 111 ILDAESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
T KL +G + + +CY + E G C C +C LR+KG+ E + K
Sbjct: 171 TIKLGYSLGVDYSMTV------SCY-----RANEEGLACGYCDSCELRKKGFKEAEIK 217
>gi|215919333|ref|NP_821053.2| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 493]
gi|206584218|gb|AAO91567.2| queuosine biosynthesis protein [Coxiella burnetii RSA 493]
Length = 244
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 35/238 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL ++ +V
Sbjct: 22 AVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHFNVVRY----- 76
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAY 124
++ L+I G + S+LT N ++ + D ++P T+VP RN IFL A A
Sbjct: 77 ------EVVTLSI-GKLGGSALTDN-SLDVPDYGGNESIPITYVPARNTIFLSIALGWAE 128
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
L +I+IG DYSGYPDCR + I A + NL G+E H + + PL+ L K E
Sbjct: 129 ILDAESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAE 188
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
T KL +G + + +CY + E G C C +C LR+KG+ E + K
Sbjct: 189 TIKLGYSLGVDYSMTV------SCY-----RANEEGLACGYCDSCELRKKGFKEAEIK 235
>gi|212219578|ref|YP_002306365.1| queuosine biosynthesis protein [Coxiella burnetii CbuK_Q154]
gi|212013840|gb|ACJ21220.1| queuosine biosynthesis protein [Coxiella burnetii CbuK_Q154]
Length = 244
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 35/238 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL ++ +V
Sbjct: 22 AVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRY----- 76
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAY 124
++ L+I G + S+LT N ++ + D ++P T+VP RN IFL A A
Sbjct: 77 ------EVVTLSI-GKLGGSALTDN-SLDVPDYGGNESIPITYVPARNTIFLSIALGWAE 128
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
L +I+IG DYSGYPDCR + I A + NL G+E H + + PL+ L K E
Sbjct: 129 ILDAESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAE 188
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
T KL +G + + +CY + E G C C +C LR+KG+ E + K
Sbjct: 189 TIKLGYSLGVDYSMTV------SCY-----RANEEGLACGYCDSCELRKKGFKEAEIK 235
>gi|209364301|ref|YP_001425481.2| queuosine biosynthesis protein [Coxiella burnetii Dugway 5J108-111]
gi|212213526|ref|YP_002304462.1| queuosine biosynthesis protein [Coxiella burnetii CbuG_Q212]
gi|207082234|gb|ABS77553.2| queuosine biosynthesis protein [Coxiella burnetii Dugway 5J108-111]
gi|212011936|gb|ACJ19317.1| queuosine biosynthesis protein [Coxiella burnetii CbuG_Q212]
Length = 244
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 35/238 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL ++ +V
Sbjct: 22 AVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRY----- 76
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAY 124
++ L+I G + S+LT N ++ + D ++P T+VP RN IFL A A
Sbjct: 77 ------EVVTLSI-GKLGGSALTDN-SLDVPDYGGNESIPITYVPARNTIFLSIALGWAE 128
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
L +I+IG DYSGYPDCR + I A + NL G+E H + + PL+ L K E
Sbjct: 129 ILDAESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAE 188
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
T KL +G + + +CY + E G C C +C LR+KG+ E + K
Sbjct: 189 TIKLGYSLGVDYSMTV------SCY-----RANEEGLACGYCDSCELRKKGFKEAEIK 235
>gi|164685855|ref|ZP_01945726.2| queuosine biosynthesis protein QueC [Coxiella burnetii 'MSU Goat
Q177']
gi|189038912|sp|A9KDD3|QUEC_COXBN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|164601372|gb|EAX33605.2| queuosine biosynthesis protein QueC [Coxiella burnetii 'MSU Goat
Q177']
Length = 226
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 35/238 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL ++ +V
Sbjct: 4 AVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRY----- 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAY 124
++ L+I G + S+LT N ++ + D ++P T+VP RN IFL A A
Sbjct: 59 ------EVVTLSI-GKLGGSALTDN-SLDVPDYGGNESIPITYVPARNTIFLSIALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
L +I+IG DYSGYPDCR + I A + NL G+E H + + PL+ L K E
Sbjct: 111 ILDAESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
T KL +G + + +CY + E G C C +C LR+KG+ E + K
Sbjct: 171 TIKLGYSLGVDYSMTV------SCY-----RANEEGLACGYCDSCELRKKGFKEAEIK 217
>gi|165924029|ref|ZP_02219861.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 334]
gi|165916514|gb|EDR35118.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 334]
Length = 226
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 35/238 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL ++ +V
Sbjct: 4 AVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRY----- 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAY 124
++ L+I G + S+LT N ++ + D ++P T+VP RN IFL A A
Sbjct: 59 ------EVVTLSI-GKLGGSALTDN-SLDVPDYGGNESIPITYVPARNTIFLSIALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
L +I+IG DYSGYPDCR + I A + NL G+E H + + PL+ L K E
Sbjct: 111 ILDAESILIGASAIDYSGYPDCRPEYIAAFQNLANLATQRGIEGHSIKIEAPLIHLSKAE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
T KL +G + + +CY + E G C C +C LR+KG+ E + K
Sbjct: 171 TIKLGYSLGVDYSMTV------SCY-----RANEEGLACGYCDSCELRKKGFKEAEIK 217
>gi|262373097|ref|ZP_06066376.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262313122|gb|EEY94207.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 226
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 115/231 (49%), Gaps = 32/231 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS TCL+WA +D + LSF YGQR+ EL+ + ++
Sbjct: 9 AIVLLSGGLDSITCLAWAQANYDCI-ALSFMYGQRSTTELDAAKALAQRA---------- 57
Query: 71 LGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G +H + LG++ S+LT +V ++Q+ +P T+VP RN IFL +A A
Sbjct: 58 -GVEHRVINIDLGNLGGSALTDHNIDVPEQLQEG-IPVTYVPARNTIFLSYALAAAEVFD 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
IVIGV DYSGYPDCR + I A L ++ V + TPL+ L K +
Sbjct: 116 AEAIVIGVNAVDYSGYPDCRPEFIDAFANLARLATKAGVEGKPLKIETPLLHLSKANIIR 175
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L + G + ++ +CY R C C +C LRQ+G++E
Sbjct: 176 LGIEHG------VDYSKTVSCYQADAQGR-----ACGKCDSCRLRQQGFIE 215
>gi|85813930|emb|CAF31559.1| putative fortimicin production protein; unknown ATP/GTP-binding
protein [Micromonospora olivasterospora]
Length = 233
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 115/239 (48%), Gaps = 39/239 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI---------V 61
A++L SGG DS+T L+ A+ LSF YGQR+ VEL+ V K + +
Sbjct: 8 AVVLLSGGLDSATVLAMAVHEGYEAHALSFRYGQRHTVELKAAARVAKALGATRHVVADI 67
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L +L +D + + H + + ++P T+VP RN IFL FA
Sbjct: 68 DLRVFGGSALTDDSLA-------VPHHASADELG-----GDIPVTYVPARNTIFLSFALA 115
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWL 175
A L ++I IGV DYSGYPDCR + I A E NL ++ V +HTPL+ L
Sbjct: 116 WAETLDASDIFIGVSALDYSGYPDCRPEYIAAYEAMANLATKAGVEGRQRLRIHTPLIQL 175
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K ET + ++G + +H+CY D R C +C +C LR +G+ E
Sbjct: 176 TKAETIRRGLELG------VDYAWTHSCY-DPVDGR-----ACGTCDSCLLRGRGFAEL 222
>gi|319957259|ref|YP_004168522.1| preq(0) biosynthesis protein quec [Nitratifractor salsuginis DSM
16511]
gi|319419663|gb|ADV46773.1| preQ(0) biosynthesis protein QueC [Nitratifractor salsuginis DSM
16511]
Length = 225
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 119/232 (51%), Gaps = 34/232 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC-RLCVRKKIVELMPKWK 68
A+ + SGG DS+ + A + + F+YGQR + ELEC RL +E + +++
Sbjct: 4 AVCIISGGMDSAVSAALAKREGYEIIAVHFNYGQRTERKELECFRLLAED--LEAVERYE 61
Query: 69 DSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ L I S+LT +V + + +P T+VP RN IFL AA +A +
Sbjct: 62 --------IDLPFFTQIGASALTDPSIDVPTEGLEPGVPVTYVPFRNGIFLSIAAAIAEK 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
G IVIGV E D SGYPDCR IRA+E AINLG E+ +T+ PL+ L+K E
Sbjct: 114 HGAEAIVIGVVEEDSSGYPDCRESYIRAMEKAINLGTKEETKITIKMPLVHLRKSEIVTK 173
Query: 184 AQDIGGQDLVNLILEESHT--CYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
A +IG V+L SHT CY E C C +C LR +G+ +
Sbjct: 174 ALEIG----VDL----SHTWSCY-------KEEEAACGVCDSCRLRLEGFKQ 210
>gi|257075836|ref|ZP_05570197.1| hypothetical protein Faci_02164 [Ferroplasma acidarmanus fer1]
Length = 239
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 114/232 (49%), Gaps = 33/232 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS T L++ALD +V +SFDYGQR+ EL+ + + K K
Sbjct: 6 AVILISGGLDSPTVLAYALDNGYKVYPVSFDYGQRHIRELQSSEDICNYYGVKLKKIKID 65
Query: 71 LGEDHILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + I S+LT + ++ + +P T+VP RN IF+ AA
Sbjct: 66 MTQ-----------IGGSALTDKIDVPERGLENIEKEIPVTYVPARNTIFISLAAAYGET 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT----VHTPLMWLKKYETW 181
+ +I IG DYSGYPDCR + +E +NLG E +T + PL +L K +
Sbjct: 115 IKANSIFIGANAIDYSGYPDCRPEFFNTMEKTLNLGTELGITDGFRIMVPLQYLTKSDIV 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL + +G + + +CY G RDK C C +C LR KG+ME
Sbjct: 175 KLGRRLG------VPYRLTWSCYNG-RDK------ACGKCDSCLLRLKGFME 213
>gi|270158200|ref|ZP_06186857.1| queuosine biosynthesis protein QueC [Legionella longbeachae D-4968]
gi|289163542|ref|YP_003453680.1| transcriptional regulator ExsB [Legionella longbeachae NSW150]
gi|269990225|gb|EEZ96479.1| queuosine biosynthesis protein QueC [Legionella longbeachae D-4968]
gi|288856715|emb|CBJ10526.1| putative transcriptional regulator ExsB [Legionella longbeachae
NSW150]
Length = 226
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 116/231 (50%), Gaps = 31/231 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + +SF YGQR+ EL + K +K
Sbjct: 4 AVILLSGGLDSTTCLALAASKGFACYAISFSYGQRHSAELFAAQRIAKH-------YK-- 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYRL 126
+ H + + + ++ H+S + ++ + D + +P T+VP RN IFL A A +
Sbjct: 55 -AKTHQI-VTLDTELFHNSALTDPSVDVPDFKEGSEIPVTYVPARNTIFLSMALGFAESI 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
G +I IG DYS YPDCR + I A +T NL ++ V T+H PL +L K +T
Sbjct: 113 GARDIFIGASSVDYSHYPDCRPEFISAFQTLANLATKAGVTGDSFTIHAPLQYLSKVQTI 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+L +G V+ L S CY + E G C C +C R++G++
Sbjct: 173 QLGISLG----VDYSLTVS--CY-----QANEAGEACGQCDSCTFRKRGFI 212
>gi|254448701|ref|ZP_05062159.1| exsB protein [gamma proteobacterium HTCC5015]
gi|198261709|gb|EDY85996.1| exsB protein [gamma proteobacterium HTCC5015]
Length = 222
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 116/229 (50%), Gaps = 30/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L+ A + TLSFDYGQRN+ EL V K + +
Sbjct: 4 AVVLLSGGLDSSTVLALARAEGYQCHTLSFDYGQRNRAEL-----VASK------RLSEE 52
Query: 71 LGE-DHILPLAILGDISHSSLTKN-VAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
LG +H + L I S+LT + + + Q++ +P T+VP RN +FL A A L
Sbjct: 53 LGAVEHKIIQLDLRAIGGSALTDSRIDVPTQESEGVPVTYVPARNTVFLSIALGWAEVLE 112
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG----MESH-VTVHTPLMWLKKYETWK 182
++ IGV DYSGYPDCR + I A +T NL E H +TVHTPL+ L K E +
Sbjct: 113 AYDVFIGVNAVDYSGYPDCRPEFIEAFQTMANLATKASTEGHPLTVHTPLIDLSKSEIIQ 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G L + +CY E G C C AC LR++G+
Sbjct: 173 KGVAAG------LDYGLTVSCYDAN-----EAGEACGQCDACRLRRQGF 210
>gi|254516699|ref|ZP_05128758.1| exsB protein [gamma proteobacterium NOR5-3]
gi|219675122|gb|EED31489.1| exsB protein [gamma proteobacterium NOR5-3]
Length = 232
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 115/235 (48%), Gaps = 28/235 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + A++L SGG DS+T L+ A ++ R +LSFDYGQR++ EL V K + ++
Sbjct: 7 MNSSKKAVILVSGGLDSTTVLALAKEQGYRCYSLSFDYGQRHRAELFAAERVSKTLGDV- 65
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATL 122
+H + L I S+LT + ++ +P T+VP RN +FL A
Sbjct: 66 ---------EHKVVRLNLDSIGGSALTDDSIAVPEEASEGIPVTYVPARNTVFLSIALGW 116
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKK 177
A LG +I IGV DYSGYPDCR I A + N+ V +HTPLM L K
Sbjct: 117 AEVLGAQDIFIGVNAVDYSGYPDCRPAFIDAFQQLANVATRVGVEGGSYQIHTPLMDLGK 176
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
E KL + ++ ++ +CY D G C C AC LR+ G++
Sbjct: 177 DEIVKLGARL------DVDYSQTVSCYQATDD-----GLACGVCDACRLRRDGFV 220
>gi|169795076|ref|YP_001712869.1| hypothetical protein ABAYE0921 [Acinetobacter baumannii AYE]
gi|260551477|ref|ZP_05825661.1| queuosine biosynthesis protein queC [Acinetobacter sp. RUH2624]
gi|260556562|ref|ZP_05828780.1| queuosine biosynthesis protein queC [Acinetobacter baumannii ATCC
19606]
gi|332851075|ref|ZP_08433184.1| protein ExsB [Acinetobacter baumannii 6013150]
gi|332869676|ref|ZP_08438864.1| protein ExsB [Acinetobacter baumannii 6013113]
gi|332875965|ref|ZP_08443751.1| protein ExsB [Acinetobacter baumannii 6014059]
gi|169148003|emb|CAM85866.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|260405471|gb|EEW98964.1| queuosine biosynthesis protein queC [Acinetobacter sp. RUH2624]
gi|260409821|gb|EEX03121.1| queuosine biosynthesis protein queC [Acinetobacter baumannii ATCC
19606]
gi|322509050|gb|ADX04504.1| Queuosine biosynthesis protein queC [Acinetobacter baumannii
1656-2]
gi|323519032|gb|ADX93413.1| hypothetical protein ABTW07_2990 [Acinetobacter baumannii
TCDC-AB0715]
gi|332730239|gb|EGJ61564.1| protein ExsB [Acinetobacter baumannii 6013150]
gi|332732578|gb|EGJ63811.1| protein ExsB [Acinetobacter baumannii 6013113]
gi|332735831|gb|EGJ66872.1| protein ExsB [Acinetobacter baumannii 6014059]
Length = 227
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+WA R++ + +SF YGQR+ EL+ + ++
Sbjct: 7 PRAIVLLSGGLDSTTCLAWAQARYECI-AISFMYGQRSTTELDAAKALAQRA-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
G +H + L ++ S+LT N+A+ Q +P T+VP RN IFL +A A
Sbjct: 58 ---GVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSYALAAAEVF 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
IVIG+ DYSGYPDCR + I A L ++ V TPL+ L K
Sbjct: 115 NAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKANII 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L + G + ++ +CY G C C +C LR++G+++
Sbjct: 175 RLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFID 215
>gi|296122193|ref|YP_003629971.1| exsB protein [Planctomyces limnophilus DSM 3776]
gi|296014533|gb|ADG67772.1| exsB protein [Planctomyces limnophilus DSM 3776]
Length = 244
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 120/241 (49%), Gaps = 36/241 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVEL 63
K +P ++L SGG DS+T L+ A + +SFDYGQR++ ELE ++C + +
Sbjct: 16 KISPPCVVLVSGGLDSATILAMAKAQGFSPFAISFDYGQRHRFELEAAEKVCQAQGVARH 75
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLV 117
+ ++PL + I S+LT N+ + + +P T+VP RN +FL
Sbjct: 76 V-----------VIPLD-MRSIGGSALTANIDVPKDRSEAELTSGIPITYVPARNTVFLS 123
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPL 172
A A +G ++ +GV DYSGYPDCR + + A E NL ++ V +H PL
Sbjct: 124 IALGWAEVIGAQDLFVGVNAVDYSGYPDCRPEFVAAFEKLANLATQTGVEGQPWKIHAPL 183
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K E + +G V+ L +H+CY G C C +C +R+KG++
Sbjct: 184 IHLTKAEIIRQGVALG----VDYSL--THSCY-----DPTPTGLSCGHCDSCLIRKKGFL 232
Query: 233 E 233
E
Sbjct: 233 E 233
>gi|94266965|ref|ZP_01290615.1| ExsB [delta proteobacterium MLMS-1]
gi|93452343|gb|EAT02971.1| ExsB [delta proteobacterium MLMS-1]
Length = 239
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 115/250 (46%), Gaps = 40/250 (16%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + + +A++L SGG DS+T L+WA R LSFDYGQR+ ELE R+
Sbjct: 1 MTENNQPGEAAVVLLSGGLDSTTVLAWASTAGYRCHCLSFDYGQRHTHELEL---ARQNA 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--------------NNLPNT 106
+W H++ L I S+LT +A+ D +P T
Sbjct: 58 A----RWG---AVQHLVLRLGLEAIGGSALTSELAVPKADPAGTLSTDPAETGAGQIPVT 110
Query: 107 FVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-- 164
+VPGRN IFL A A LG I IGV DYSGYPDCR D + + NLG ++
Sbjct: 111 YVPGRNTIFLSCAVAWAEVLGAGEIFIGVNAVDYSGYPDCRPDFLESFNRTANLGTKAGR 170
Query: 165 ---HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSC 221
+ PL+ L K E K +G V+ L +H+CY R C C
Sbjct: 171 EGRGFRIQAPLLRLSKAEIIKKGLALG----VDYSL--THSCYDPDEHHRP-----CGRC 219
Query: 222 PACYLRQKGW 231
AC LR++G+
Sbjct: 220 DACRLRRRGF 229
>gi|261855157|ref|YP_003262440.1| exsB protein [Halothiobacillus neapolitanus c2]
gi|261835626|gb|ACX95393.1| exsB protein [Halothiobacillus neapolitanus c2]
Length = 235
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 116/237 (48%), Gaps = 35/237 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+T + A +V +SFDYGQR+KVEL+ V +
Sbjct: 10 PKAVVLLSGGLDSATVAAIAKSDGYQVHAVSFDYGQRHKVELKAAYRVALQ--------- 60
Query: 69 DSLGEDHILPLAI-LGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAAT 121
LG H ++I L D+ S+LT + A+ + D ++P T+VP RN+ FL A
Sbjct: 61 --LGIQHHKMISINLNDVGGSALTDS-ALAVPDYDAQSAEHIPITYVPARNLTFLSLALG 117
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
A LG I IGV DYSGYPDCR + I+ E NL + +T + PL L
Sbjct: 118 WAEILGARRIYIGVNAVDYSGYPDCRPEFIKQFEVTANLATAAGLTGEPFKIIAPLQTLT 177
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K E + G + ++ +CY E G C C AC+ R++G+M+
Sbjct: 178 KAEIIQWGTRFG------VDYAQTISCY-----NPDEQGRACGRCDACHYRKQGFMD 223
>gi|184159136|ref|YP_001847475.1| PP-loop superfamily ATPase [Acinetobacter baumannii ACICU]
gi|213158262|ref|YP_002320313.1| ExsB protein [Acinetobacter baumannii AB0057]
gi|215482626|ref|YP_002324818.1| Queuosine biosynthesis protein queC [Acinetobacter baumannii
AB307-0294]
gi|239501046|ref|ZP_04660356.1| hypothetical protein AbauAB_01927 [Acinetobacter baumannii AB900]
gi|301346461|ref|ZP_07227202.1| hypothetical protein AbauAB0_09454 [Acinetobacter baumannii AB056]
gi|301512447|ref|ZP_07237684.1| hypothetical protein AbauAB05_12717 [Acinetobacter baumannii AB058]
gi|301594744|ref|ZP_07239752.1| hypothetical protein AbauAB059_03007 [Acinetobacter baumannii
AB059]
gi|183210730|gb|ACC58128.1| predicted PP-loop superfamily ATPase [Acinetobacter baumannii
ACICU]
gi|193078033|gb|ABO12959.2| hypothetical protein A1S_2542 [Acinetobacter baumannii ATCC 17978]
gi|213057422|gb|ACJ42324.1| ExsB protein [Acinetobacter baumannii AB0057]
gi|213987229|gb|ACJ57528.1| Queuosine biosynthesis protein queC [Acinetobacter baumannii
AB307-0294]
Length = 223
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+WA R++ + +SF YGQR+ EL+ + ++
Sbjct: 3 PRAIVLLSGGLDSTTCLAWAQARYECI-AISFMYGQRSTTELDAAKALAQR--------- 52
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
G +H + L ++ S+LT N+A+ Q +P T+VP RN IFL +A A
Sbjct: 53 --AGVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSYALAAAEVF 110
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
IVIG+ DYSGYPDCR + I A L ++ V TPL+ L K
Sbjct: 111 NAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKANII 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L + G + ++ +CY R C C +C LR++G+++
Sbjct: 171 RLGIEHG------VDYSQTVSCYQADAQGR-----ACGKCDSCRLRKEGFID 211
>gi|94263299|ref|ZP_01287115.1| ExsB [delta proteobacterium MLMS-1]
gi|93456382|gb|EAT06506.1| ExsB [delta proteobacterium MLMS-1]
Length = 239
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 115/250 (46%), Gaps = 40/250 (16%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + + +A++L SGG DS+T L+WA R LSFDYGQR+ ELE R+
Sbjct: 1 MTENNQPGEAAVVLLSGGLDSTTVLAWASTAGYRCHCLSFDYGQRHTHELEL---ARQNA 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--------------NNLPNT 106
+W H++ L I S+LT +A+ D +P T
Sbjct: 58 A----RWG---AVQHLVLKLGLEAIGGSALTSELAVPKADPAGTLSTDPAETGAGQIPVT 110
Query: 107 FVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-- 164
+VPGRN IFL A A LG I IGV DYSGYPDCR D + + NLG ++
Sbjct: 111 YVPGRNTIFLSCAVAWAEVLGAGEIFIGVNAVDYSGYPDCRPDFLESFNRTANLGTKAGR 170
Query: 165 ---HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSC 221
+ PL+ L K E K +G V+ L +H+CY R C C
Sbjct: 171 EGRGFRIQAPLLRLSKAEIIKKGLALG----VDYSL--THSCYDPDEHHRP-----CGRC 219
Query: 222 PACYLRQKGW 231
AC LR++G+
Sbjct: 220 DACRLRRRGF 229
>gi|54298878|ref|YP_125247.1| hypothetical protein lpp2945 [Legionella pneumophila str. Paris]
gi|81369632|sp|Q5X101|QUEC_LEGPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|53752663|emb|CAH14098.1| hypothetical protein lpp2945 [Legionella pneumophila str. Paris]
Length = 228
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + LSF YGQR+ EL C +I + M
Sbjct: 4 AVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAEL----CAATRIAKHMG----- 54
Query: 71 LGEDH---ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
DH L A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 55 -AADHKIVTLDTALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IG DYS YPDCR + I + ++ NL ++ + T++ PL +L K + +
Sbjct: 114 ARDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQAIQ 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L ++G V+ L S CY + E G C C +C R++G+
Sbjct: 174 LGTELG----VDYGLTVS--CY-----QANEAGEACGQCDSCTFRKRGF 211
>gi|296132467|ref|YP_003639714.1| exsB protein [Thermincola sp. JR]
gi|296031045|gb|ADG81813.1| exsB protein [Thermincola potens JR]
Length = 225
Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 112/233 (48%), Gaps = 34/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ C+S A + + +SF YGQR+ E+EC KK+ E K
Sbjct: 4 AVVLLSGGLDSTVCMSVAQKQGYELYPISFLYGQRHSREIECA----KKVAEYYQVKK-- 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + I S+LT N+ + D N +P T+VP RN+IFL +A A +G
Sbjct: 58 ----HLIITTNMDSIGGSALTANIDVPEGDENRSEIPVTYVPARNLIFLSYALGYAEVIG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYETW 181
I IGV DYSGYPDCR + I + + ++ + + PL+ L K E
Sbjct: 114 AEKIFIGVNAVDYSGYPDCRPEFIERFQQLADYSTKAATQDKREIKIEAPLLNLTKAEIV 173
Query: 182 KLAQDIGGQDLVN-LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL + N LE + +CY G C C +C LR KG+ E
Sbjct: 174 KLG-------VANKAPLELTTSCYRGGEK-------ACGRCDSCLLRLKGFKE 212
>gi|32475312|ref|NP_868306.1| transcription regulator [Rhodopirellula baltica SH 1]
gi|81658063|sp|Q7UFU6|QUEC_RHOBA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|32445853|emb|CAD78584.1| probable transcription regulator [Rhodopirellula baltica SH 1]
Length = 250
Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 33/242 (13%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A A++L SGG DS+TC++ A D+ V +SF YGQR+ EL+ K LM
Sbjct: 19 QDAGKAVVLLSGGLDSATCVAIARDQGFEVHAISFRYGQRHDGELD----RAAKQASLMG 74
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFA 119
+ + + LA LG + + ++A+ D+ ++P T+VP RN IFL +A
Sbjct: 75 VVSHRVID---IDLAQLG--GSALVDSSIAVPKSDHVDKIAGDIPVTYVPARNTIFLSYA 129
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLM 173
+A LG +I IGV DYSGYPDCR + I A +T L ++ V T+HTPL+
Sbjct: 130 LAVAETLGSRDIFIGVNALDYSGYPDCRPEFIDAFQTMARLATKAGVEDEHSLTIHTPLL 189
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCY--LGKRDKRYEWGYGCNSCPACYLRQKGW 231
K E + ++G + ++ +CY G D+ C C AC LR KG+
Sbjct: 190 HWTKAEIIQRGIELG------VDYSQTLSCYDPQGSSDEMRP----CGQCDACLLRAKGF 239
Query: 232 ME 233
E
Sbjct: 240 AE 241
>gi|118602572|ref|YP_903787.1| exsB protein [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|189038939|sp|A1AWK9|QUEC_RUTMC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118567511|gb|ABL02316.1| preQ(0) biosynthesis protein QueC [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 230
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 115/233 (49%), Gaps = 29/233 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + +LSFDYGQ+ K EL K E K S
Sbjct: 10 AVILLSGGLDSTTTLAIAKTKNFECYSLSFDYGQKQKSEL--------KSAENFAKIFGS 61
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ H + L +I S+LT + + + +++P T+VP RN IFL +A + + L
Sbjct: 62 I--KHRVMKISLSNIDFSALTDDKIDIPKFSKSDDIPITYVPARNTIFLSYALSWSEVLD 119
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR I+A E NL + + T+HTPL+ L K + K
Sbjct: 120 CQHIFIGVNTLDYSGYPDCREIYIKAFEVMANLATKQSIEGKKLTIHTPLIHLNKAQIIK 179
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + TCY + G C C AC R+ G++E K
Sbjct: 180 KGLSLG------IDYSLTTTCYQADKS-----GKACGICDACEYRKLGFIEAK 221
>gi|237800230|ref|ZP_04588691.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|237806418|ref|ZP_04593122.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023087|gb|EGI03144.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027531|gb|EGI07586.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 229
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 119/238 (50%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN++ A++L SGG DS+T ++ AL T+SFDYGQR++ EL+ V + +
Sbjct: 1 MNELTNTGKRAVILLSGGLDSATVVAMALAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGSALG----VDYSLTVS--CY-----QADDQGRACGKCDSCRLRAEGF 217
>gi|154149359|ref|YP_001406321.1| ExsB protein [Campylobacter hominis ATCC BAA-381]
gi|189038903|sp|A7I1D0|QUEC_CAMHC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|153805368|gb|ABS52375.1| ExsB protein [Campylobacter hominis ATCC BAA-381]
Length = 220
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 118/232 (50%), Gaps = 37/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPKW 67
A+ + SGG DSST A ++ + L FDY QR K E EC +C
Sbjct: 3 AVCVISGGMDSSTAAFIAKEQGYEILALHFDYNQRTMKKERECFNLIC------------ 50
Query: 68 KDSLG--EDHILPLAILGDISHSSLT-KNVAMK---IQDNNLPNTFVPGRNIIFLVFAAT 121
D LG IL ++ + I +SLT KN+ ++ ++ +PNT+VP RN IFL AA
Sbjct: 51 -DDLGVKSREILDVSFIAQIGANSLTDKNLTIQKTGVKSGEIPNTYVPFRNGIFLSVAAA 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYE 179
A + G + IGV E D SGYPDC + I+ IE+AIN G + + + PL+ L K +
Sbjct: 110 FAEKEGADALFIGVVEEDSSGYPDCSENFIKKIESAINAGTSPNFKLEIKIPLVHLSKTQ 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K A +IG + LE + +CY + DK C C +C LR KG+
Sbjct: 170 IVKKALEIG------VPLEHTWSCY-EREDK------ACGFCDSCRLRLKGF 208
>gi|167628631|ref|YP_001679130.1| exsb protein, putative [Heliobacterium modesticaldum Ice1]
gi|167591371|gb|ABZ83119.1| exsb protein, putative [Heliobacterium modesticaldum Ice1]
Length = 247
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 33/240 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVELM 64
A+++ SGG DS+TC++ A R + + L+F Y QR+ E+E C +I++L
Sbjct: 8 AVVILSGGLDSTTCMALADCRGEDIFALTFAYNQRHIREIEAAQAVACHYGAHHQIIDLG 67
Query: 65 PKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNN-------LPNTFVPGRNIIFL 116
+ S L I P + + S++ K AM + N +P T+VP RNI+FL
Sbjct: 68 AVFAASALTSTEIRP-EVAAPLGGSAVAKMEAMGCAEKNPVAIATAIPATYVPARNILFL 126
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTP 171
+A + A ++G I GV D GYPDCR + I A + I++G ++ V V TP
Sbjct: 127 AYALSFAEKVGARRIYTGVNALDNPGYPDCRPEFIAAFQRMIDVGTKAGTEGRSVEVFTP 186
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ + K + +LA D+ + L + TCY G+R C C +C LR +G+
Sbjct: 187 LIEMNKADIIRLALDL------DAPLHLTLTCYYGERP-------ACGECNSCRLRLEGF 233
>gi|297621549|ref|YP_003709686.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
86-1044]
gi|297376850|gb|ADI38680.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
86-1044]
Length = 228
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 27/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++ SGG DSS CL A+DR D+V ++SF YGQR+ EL + ++
Sbjct: 2 RCKQALVVHSGGMDSSLCLKLAIDRHGADQVLSISFRYGQRHSNEL-------VQAAKIC 54
Query: 65 PKWKDSLGEDH-ILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
W G DH ++ L L +I+ ++L +A++ PNT V GRN + AA
Sbjct: 55 RDW----GVDHCVIQLDCLQEITDNALMNTEIAIEHSQGRPPNTLVLGRNGLMARLAAIH 110
Query: 123 AYRLGITNIVIGVCETD--YSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYE 179
A LG I +GV E + SGY DC D + +E + + +++ + TP++ + K +
Sbjct: 111 ANHLGAEKIYMGVIEVEGANSGYRDCSRDYMDLMEKILRIDLDNPRFEIVTPIVQMTKCQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
T LA +G +++ +L+E+ TCY G G GC CPAC LR +G +K
Sbjct: 171 TMALADQLG---VLDYLLKETITCYEGI------GGRGCQHCPACKLRNEGADRYK 217
>gi|46201268|ref|ZP_00055430.2| COG0603: Predicted PP-loop superfamily ATPase [Magnetospirillum
magnetotacticum MS-1]
Length = 229
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 112/236 (47%), Gaps = 36/236 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A L+F YGQR+ VE+ R+ ++
Sbjct: 6 AIVLLSGGLDSATVLAIAKAEGFTPSALTFRYGQRHAVEIRAAERVAAALRV-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAATL 122
DH + L S+LT ++A+ + +P T+VP RN I L FA
Sbjct: 58 ----SDHRVADIDLRVFGGSALTSDIAVPKGNLDEAIPEGIPVTYVPARNTIMLSFALAF 113
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKK 177
A LG +I +GV DYSGYPDCR D I+A E NL ++ V T+HTPL+ L K
Sbjct: 114 AEVLGAADIFVGVNAVDYSGYPDCRPDYIKAFEAMANLATKAAVEGTRMTLHTPLIDLTK 173
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + +G V+ L + TCY G C C +C LR KG+ E
Sbjct: 174 ADIIRRGLALG----VDYSL--TSTCY-----DPDPMGRACGHCDSCRLRLKGFAE 218
>gi|260887290|ref|ZP_05898553.1| ExsB protein [Selenomonas sputigena ATCC 35185]
gi|330838956|ref|YP_004413536.1| exsB protein [Selenomonas sputigena ATCC 35185]
gi|260862926|gb|EEX77426.1| ExsB protein [Selenomonas sputigena ATCC 35185]
gi|329746720|gb|AEC00077.1| exsB protein [Selenomonas sputigena ATCC 35185]
Length = 224
Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 32/230 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TC++ A ++ + +SFDY QR+ +ELE KKI +
Sbjct: 4 AVVLLSGGLDSTTCMAVAKEQGKELYPISFDYHQRHSIELEGA----KKIAAFYKVNR-- 57
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
H++ + I S+LT + +A+ + ++P T+VP RN+IFL +A A +
Sbjct: 58 ----HLIIETNMEAIGGSALTDDSIAVPEGDVSRTSVPVTYVPARNLIFLSYALGYAETI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETW 181
G ++ IGV DYSGYPDCR + IR + + E+ + + TPL L K +
Sbjct: 114 GARSVYIGVNSVDYSGYPDCRPEFIRHFQAVADYSTEAASEGKRIEIVTPLQNLSKADIV 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+LA + + LE +H+CY G C C +C LR +G+
Sbjct: 174 RLATRLA------VPLELTHSCYSGGEK-------ACGVCDSCKLRLQGF 210
>gi|192361867|ref|YP_001983292.1| exsB protein [Cellvibrio japonicus Ueda107]
gi|254764318|sp|B3PC22|QUEC_CELJU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|190688032|gb|ACE85710.1| exsB protein [Cellvibrio japonicus Ueda107]
Length = 225
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 121/231 (52%), Gaps = 30/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A + T+SFDYGQR++ EL K E+ K S
Sbjct: 6 AVILVSGGLDSTTVIAIARSQGYDCYTISFDYGQRHRAEL--------KAAEITAKAHGS 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKI---QDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L +H + LG I S+LT + ++ + + + +P T+VP RN +FL A A LG
Sbjct: 58 L--EHKVIRLDLGAIGGSALT-DTSIDVPEEETSGIPVTYVPARNTVFLSIALGWAEVLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR D I A ET NL G+E + + TPL+ L K + +
Sbjct: 115 ALDIFIGVNAVDYSGYPDCRPDYIAAYETMANLATKRGIEGERLHIRTPLINLTKAQIIQ 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L S CY + + G C C +C LR++G+ +
Sbjct: 175 QGLALG----VDYRLTVS--CY-----QANDGGEACGKCDSCRLRKQGFEQ 214
>gi|288942464|ref|YP_003444704.1| exsB protein [Allochromatium vinosum DSM 180]
gi|288897836|gb|ADC63672.1| exsB protein [Allochromatium vinosum DSM 180]
Length = 232
Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 115/236 (48%), Gaps = 35/236 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A LSF YGQR+ VELE + +S
Sbjct: 4 AVVLLSGGLDSTTALAIARAEGFVPHALSFRYGQRHAVELEA-----------AARVAES 52
Query: 71 LG-EDHILPLAILGDISHSSLTKNVAM------KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+G +H++ L S+LT ++A+ + ++++P T+VP RN +FL FA A
Sbjct: 53 MGVTEHVIAEIDLRRFGGSALTADLAVPKGRDPREMESDIPVTYVPARNTVFLSFALAWA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKK 177
L ++I IGV DYSGYPDCR + I A E NL + V +H PL+ + K
Sbjct: 113 EVLEASDIFIGVNALDYSGYPDCRPEYIAAFEQLANLATAAGVEGRQRYRIHAPLIEMSK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E + +G V+ L S CY G C +C +C LR KG+ E
Sbjct: 173 AEIIRTGLALG----VDYGLTSS--CY-----DPGSGGRPCGACDSCQLRAKGFAE 217
>gi|262278176|ref|ZP_06055961.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258527|gb|EEY77260.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 226
Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+WA R++ + +SF YGQR+ EL+ + ++
Sbjct: 7 PRAIVLLSGGLDSTTCLAWAQARYECI-AISFMYGQRSTTELDAAKALTQR--------- 56
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+H + L ++ S+LT N+A+ Q +P T+VP RN IFL +A A
Sbjct: 57 --ADVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSYALAAAEVF 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
IVIG+ DYSGYPDCR + I A L ++ V TPL+ L K
Sbjct: 115 NAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKANII 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L + G + ++ +CY G C C +C LR++G++E
Sbjct: 175 RLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIE 215
>gi|206889348|ref|YP_002248069.1| ExsB protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741286|gb|ACI20343.1| ExsB protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 224
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 112/230 (48%), Gaps = 25/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L A LSFDYGQR+K+E+E V K I
Sbjct: 4 AVILLSGGIDSSTTLIIAKSEGFECYALSFDYGQRHKIEIEAAKKVAKHIGV-------- 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
++H++ L I S+LT + + ++ +P T+VP RN IFL F A L
Sbjct: 56 --KEHLIVSFDLRKIGGSALTSKMEIPKEEIEGIPITYVPARNTIFLSFGLAWAEVLQCP 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWKL 183
NI IG DYSGYPDCR + ++A E NL + V ++ PL++L K E K
Sbjct: 114 NIFIGANIVDYSGYPDCRPEYLQAFERMANLATKISVEGTLKFKINAPLLYLTKSEIIKK 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
++G L + +CY + D E C CP+C R KG+ E
Sbjct: 174 GIELG------LDYSLTWSCYDPQGDP--ENPSPCLKCPSCIYRLKGFKE 215
>gi|262375548|ref|ZP_06068781.1| queuosine biosynthesis protein queC [Acinetobacter lwoffii SH145]
gi|262309802|gb|EEY90932.1| queuosine biosynthesis protein queC [Acinetobacter lwoffii SH145]
Length = 222
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 32/233 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+WA R++ + LSF YGQR+ EL+ + ++
Sbjct: 3 PRAIVLLSGGLDSTTCLAWAQARYECI-ALSFRYGQRSTTELDAARALTQRA-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYR 125
G +H + LG++ S+LT + ++++ D+ +P T+VP RN IFL +A A
Sbjct: 54 ---GVEHRVINIDLGNLGGSALTDH-SIEVPDHEQAGIPITYVPARNTIFLSYALAAAEV 109
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLMWLKKYET 180
IVIG+ DYSGYPDCR + I A A +G+E + TPL+ L K
Sbjct: 110 FEAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKVGVEGQALKFETPLLHLSKANI 169
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L + G + ++ +CY + G C C +C LR++G+ +
Sbjct: 170 IRLGIEHG------VDYSQTVSCYQAD-----DQGRACGKCDSCRLRKQGFAD 211
>gi|326330125|ref|ZP_08196436.1| ExsB protein [Nocardioidaceae bacterium Broad-1]
gi|325951938|gb|EGD43967.1| ExsB protein [Nocardioidaceae bacterium Broad-1]
Length = 232
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 122/235 (51%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A D+ LSF YGQR+++ELE V +
Sbjct: 5 AVVLLSGGLDSTTVLAIAKDQGYEPYALSFRYGQRHEIELEAARRVAEAAGVTR------ 58
Query: 71 LGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
H+L L S+LT +V A ++ +++P T+VP RN +FL FA A
Sbjct: 59 ----HVLCDIDLRVFGGSALTADVDVPKHGSADELASDDVPITYVPARNTVFLSFALAYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKY 178
+ T+I IGV DYSGYPDCR + I A E NL G+E + + +HTPL+ L K
Sbjct: 115 ETIEATDIFIGVSALDYSGYPDCRPEYIAAYEQMANLATRAGIEGNRMKIHTPLIELTKG 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+T ++ + +G V+ L S CY D E G+ C C +C LR KG+ E
Sbjct: 175 QTVEIGKRLG----VDYSLTSS--CY----DPDAE-GHPCGHCDSCLLRLKGFAE 218
>gi|169632732|ref|YP_001706468.1| hypothetical protein ABSDF0931 [Acinetobacter baumannii SDF]
gi|169151524|emb|CAP00291.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii]
Length = 227
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+WA R + + +SF YGQR+ EL+ + ++
Sbjct: 7 PRAIVLLSGGLDSTTCLAWAQARHECI-AISFMYGQRSTTELDAAKALAQRA-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
G +H + L ++ S+LT N+A+ Q +P T+VP RN IFL +A A
Sbjct: 58 ---GVEHHVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSYALAAAEVF 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
IVIG+ DYSGYPDCR + I A L ++ V TPL+ L K
Sbjct: 115 NAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKANII 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L + G + ++ +CY G C C +C LR++G+++
Sbjct: 175 RLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFID 215
>gi|123967115|ref|YP_001012196.1| ATPase [Prochlorococcus marinus str. MIT 9515]
gi|167016445|sp|A2BZ78|QUEC_PROM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|123201481|gb|ABM73089.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9515]
Length = 224
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 123/239 (51%), Gaps = 30/239 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA++L SGG DSST A ++ LSFDYGQR+K EL L + K
Sbjct: 7 SAVILLSGGLDSSTVTGLAKASKAKIFGLSFDYGQRHKKELNSALTIAKHF--------- 57
Query: 70 SLGEDHI--LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ E I L L++ G S + K++ ++ +Q N +PNT+VPGRN IF+ A + A +
Sbjct: 58 AIEEFKIVKLDLSLWGGSSLTDTKKDLPIEGVQLNTIPNTYVPGRNTIFISVALSYAEAI 117
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETW 181
I +GV DYSGYPDCR D I+ + L G E + + + TPL+ L K +
Sbjct: 118 NADLIGLGVNALDYSGYPDCRPDYIKKFQELAYLANKRGREDNPIKLWTPLIDLNKEDII 177
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+LA D N+ LE++ +CY G C C +C +RQ + +++ K +
Sbjct: 178 QLAFD------HNVPLEKTWSCYSGNLKP-------CGKCDSCRIRQTAYKKWQIKQNE 223
>gi|260436436|ref|ZP_05790406.1| ExsB protein [Synechococcus sp. WH 8109]
gi|260414310|gb|EEX07606.1| ExsB protein [Synechococcus sp. WH 8109]
Length = 226
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 28/231 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + AL++ DRV LSFDYGQR++ EL+ + +++
Sbjct: 5 TAIALLSGGLDSATAAALALEQGDRVIGLSFDYGQRHRRELDAAAAIAEQL--------- 55
Query: 70 SLGEDHILPL-------AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L E H + + + L D S S T V ++ ++P T+VPGRN +F+ +L
Sbjct: 56 GLAEHHCISVNLASWGGSALTDASISIPTHGV----EEGSIPPTYVPGRNTVFISVGLSL 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G +V+GV DYSGYPDCR D + A +T +L ++ H +W + W
Sbjct: 112 AEARGAERLVLGVNAVDYSGYPDCRPDYLNAFQTLADLASKAGREDHGAQLWAPLVQ-WS 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + + +E + +CY G + C C +C +R E
Sbjct: 171 KVRIVEEALRLGVPIETTWSCYSGGT-------HPCGVCDSCRIRDAALRE 214
>gi|330830835|ref|YP_004393787.1| 7-cyano-7-deazaguanine synthase 2 [Aeromonas veronii B565]
gi|328805971|gb|AEB51170.1| 7-cyano-7-deazaguanine synthase 2 [Aeromonas veronii B565]
Length = 131
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 9/121 (7%)
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
+FL +A AY++G ++ GVCETD+SGYPDCR + ++A+ A+ LGM+ V TPLM
Sbjct: 1 MFLTLSAIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNLAVVLGMDRPVRFETPLM 60
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
WL K ETW LA G + V ++ TCY G + G GC CPAC LR KG E
Sbjct: 61 WLDKAETWALADHCGHLETVR---RQTLTCYNGIQ------GDGCGECPACILRAKGLEE 111
Query: 234 F 234
+
Sbjct: 112 Y 112
>gi|254482558|ref|ZP_05095797.1| exsB protein [marine gamma proteobacterium HTCC2148]
gi|214037249|gb|EEB77917.1| exsB protein [marine gamma proteobacterium HTCC2148]
Length = 224
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 30/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + TLSFDYGQR++ EL + +
Sbjct: 6 AVILVSGGLDSTTVLAMAKAQGYACYTLSFDYGQRHRAELFA-----------AERVSVT 54
Query: 71 LGE-DHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+ +H + L I S+LT + + + +P T+VP RN +FL A A LG
Sbjct: 55 LGDVEHKVVTLNLDSIGGSALTDSGIPVPEEETEGIPVTYVPARNTVFLSIALGWAEVLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR D I A E NL + V +HTPLM + K + +
Sbjct: 115 AQDIFIGVNAVDYSGYPDCRPDYISAFEVMANLATRAGVEGNRLGIHTPLMEMSKGDIIE 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY + + G C C AC LR +G+
Sbjct: 175 AGLALG----VDYALTVS--CY-----QATDEGLACGKCDACRLRSQGF 212
>gi|205373220|ref|ZP_03226024.1| aluminum resistance protein [Bacillus coahuilensis m4-4]
Length = 108
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 79 LAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
+++L ++ ++LT+ ++A+ ++ LP+TFVPGRN++FL FAA LA ++G +I+ GVCE
Sbjct: 1 MSLLNQLAPNALTRSDIAITHEEGELPSTFVPGRNLLFLSFAAVLAKQIGAKHIITGVCE 60
Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
TD+SGYPDCR I+++ +NL M+ +HTPLMWL K
Sbjct: 61 TDFSGYPDCRDVFIKSLNVTLNLSMDEQFVIHTPLMWLDK 100
>gi|71909651|ref|YP_287238.1| ExsB [Dechloromonas aromatica RCB]
gi|110816224|sp|Q478G3|QUEC_DECAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|71849272|gb|AAZ48768.1| preQ(0) biosynthesis protein QueC [Dechloromonas aromatica RCB]
Length = 225
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 115/229 (50%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + LSF+YGQR+ EL ++V+ +
Sbjct: 5 AVVLLSGGLDSATCLAIARSQGFESYCLSFNYGQRHCAEL----VAADRVVKAL-----G 55
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E +L L S+LT N+A+ + +P T+VP RN I L A A LG
Sbjct: 56 AAEHRVLNFG-LAQFGGSALTDTNIAVPTEGVQPGIPVTYVPARNTIMLSLALAWAEVLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETWK 182
+I +GV DYSGYPDCR + I A ET NL G+E H +++H PL+ L K E +
Sbjct: 115 SRDIFVGVNAVDYSGYPDCRPEYIAAFETMANLATKAGVEGHKLSIHAPLIDLSKAEIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY + E G C C +C LR +G+
Sbjct: 175 TGAALG----VDYSLTVS--CY-----QADEQGRACGVCDSCRLRAEGF 212
>gi|33866961|ref|NP_898520.1| ATPase [Synechococcus sp. WH 8102]
gi|81573666|sp|Q7U3K1|QUEC_SYNPX RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33639562|emb|CAE08946.1| possible ATPase [Synechococcus sp. WH 8102]
Length = 226
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ L SGG DS+T + AL+ DRV LSFDYGQR+ ELE V +
Sbjct: 5 TSVALLSGGLDSATAAAMALEEGDRVIGLSFDYGQRHHRELEAAAAVASHL--------- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L E H L + L S+LT + +Q+ +P T+VPGRN +F+ +LA
Sbjct: 56 GLAEHHCLAVD-LAAWGGSALTDDAVTIPTDGVQEGVIPPTYVPGRNTVFIAVGLSLAEA 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G +V+GV DYSGYPDCR D + + NL ++ H +W E W +
Sbjct: 115 RGAERLVLGVNAVDYSGYPDCRPDYLNVFQQLANLASKAGREGHGTELWAPLVE-WSKTR 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +N+ ++ + +CY G C C +C +R E
Sbjct: 174 IVEEAFRLNVPIQSTWSCYSGGTTP-------CGICDSCRIRDAALRE 214
>gi|327540919|gb|EGF27477.1| trans-regulatory protein ExsB [Rhodopirellula baltica WH47]
Length = 245
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 121/240 (50%), Gaps = 29/240 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A A++L SGG DS+TC++ A D+ V +SF YGQR+ EL+ K LM
Sbjct: 14 QDAGKAVVLLSGGLDSATCVAIARDQGFEVHAISFRYGQRHDGELD----RAAKQASLMG 69
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFA 119
+ + + LA LG + + ++A+ D+ ++P T+VP RN IFL +A
Sbjct: 70 VVTHRVID---IDLAQLG--GSALVDSSIAVPKSDHVDKIAGDIPVTYVPARNTIFLSYA 124
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLM 173
+A LG +I IGV DYSGYPDCR + I A +T L ++ V T+HTPL+
Sbjct: 125 LAVAETLGSRDIFIGVNALDYSGYPDCRPEFINAFQTMARLATKAGVEDEHSLTIHTPLL 184
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K E + ++G + ++ +CY + E C C AC LR KG+ E
Sbjct: 185 HWTKAEIIQRGIELG------VDYSQTLSCY-DPQGSNAEM-RPCGQCDACLLRAKGFAE 236
>gi|53804444|ref|YP_113697.1| exsB protein [Methylococcus capsulatus str. Bath]
gi|81682290|sp|Q609K0|QUEC_METCA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|53758205|gb|AAU92496.1| exsB protein [Methylococcus capsulatus str. Bath]
Length = 223
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 114/232 (49%), Gaps = 32/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A +SFDYGQR+ EL+ + S
Sbjct: 4 AVVLLSGGLDSATTLAIARREGFACHAMSFDYGQRHGAELKA-----------ARRLAQS 52
Query: 71 LGE-DHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRL 126
LG +H L I S+LT ++ + + D N +P T+VP RN +FL FA A L
Sbjct: 53 LGAIEHKTVHIGLDAIGGSALT-DLRIAVPDHPQNGIPVTYVPARNTVFLSFALGWAEVL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
G +I IGV DYSGYPDCR + IRA E NL + V +HTPL+ L K +
Sbjct: 112 GALDIFIGVNAVDYSGYPDCRPEFIRAFEQLANLATKVGVEGGRFRIHTPLIDLSKADII 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G ++ + S CY + G C C +C LR++G+ +
Sbjct: 172 RTGTALG----IDYAMTVS--CYAADAE-----GLACGVCDSCRLRRQGFEQ 212
>gi|77163687|ref|YP_342212.1| ExsB [Nitrosococcus oceani ATCC 19707]
gi|254435905|ref|ZP_05049412.1| exsB protein [Nitrosococcus oceani AFC27]
gi|110816236|sp|Q3JER4|QUEC_NITOC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|76882001|gb|ABA56682.1| preQ(0) biosynthesis protein QueC [Nitrosococcus oceani ATCC 19707]
gi|207089016|gb|EDZ66288.1| exsB protein [Nitrosococcus oceani AFC27]
Length = 224
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 30/232 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AP A++L SGG DS+T L+ A ++ TLSF+YGQR++VEL+ + +++ +
Sbjct: 3 APKAVVLVSGGLDSATVLAIAREQEFICHTLSFNYGQRHRVELQAAAEISRRMGAV---- 58
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLAY 124
+H LG S+LT + +M + + + +P T+VP RN +FL FA A
Sbjct: 59 ------EHKRITIDLGGFGGSALT-DPSMAVPEASSGAIPITYVPARNTVFLSFALGWAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHV-TVHTPLMWLKKYE 179
LG +I IGV DYSGYPDCR I+A E L G+E + PL+ L K E
Sbjct: 112 VLGAQDIFIGVNAVDYSGYPDCRPAFIKAFEHLAKLATCAGLEGRAFRIQAPLLHLSKAE 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G + + +CY E G C C +C R++G+
Sbjct: 172 IIREGMRLG------IDYSRTISCYQAD-----ENGRACGVCDSCRFRKQGF 212
>gi|254414877|ref|ZP_05028641.1| exsB protein [Microcoleus chthonoplastes PCC 7420]
gi|196178366|gb|EDX73366.1| exsB protein [Microcoleus chthonoplastes PCC 7420]
Length = 232
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 112/241 (46%), Gaps = 37/241 (15%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-------K 59
K A++L SGG DSST L A +SFDY QR++ ELE + + K +
Sbjct: 5 KMSKAVVLLSGGLDSSTVLYQAKAEGYECYAISFDYQQRHQRELESAIAIAKGAGVKYHQ 64
Query: 60 IVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+V + +W S D L L + +++ ++P T+VP RN IFL F
Sbjct: 65 VVRFDLSQWGGSALTDDTL-----------DLPQTRSLQQMSQSIPITYVPARNTIFLSF 113
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLM 173
+ A +G T + +GV DYSGYPDCR D I+A++ LG + + + TPL+
Sbjct: 114 GLSYAEAIGATALYLGVNALDYSGYPDCRPDYIQAMQEVFRLGTKQGREGEPIQIITPLI 173
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
LKK E +L +G + E+ +CY G C C +C LR + E
Sbjct: 174 QLKKTEIIELGNKLG------VPWHETWSCYAGDE-------VACGVCDSCRLRLAAFAE 220
Query: 234 F 234
Sbjct: 221 L 221
>gi|144897535|emb|CAM74399.1| ExsB [Magnetospirillum gryphiswaldense MSR-1]
Length = 230
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 115/234 (49%), Gaps = 32/234 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LSF YGQR++VEL C V + D
Sbjct: 5 AVILLSGGLDSATVLALATEWGFDCAALSFRYGQRHQVELACAAKVAAAAGVADHRIAD- 63
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKI------QDNNLPNTFVPGRNIIFLVFAATLAY 124
+ L + G S+LT ++A+ + +P T+VP RN I L FA A
Sbjct: 64 ------IDLRLFGG---SALTADIAVPKDRLEAEMEAEIPVTYVPARNTIMLSFALAFAE 114
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
LG +I +GV DYSGYPDCR + I+A ET NL ++ V T+H PL+ L K +
Sbjct: 115 VLGAADIFVGVNAVDYSGYPDCRPEYIKAFETMANLATKAGVEGRRLTIHAPLISLTKAQ 174
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G V+ L S CY D G+ C C AC LR KG+ +
Sbjct: 175 IIAEGKRLG----VDYGLTSS--CY----DPDVH-GHACGRCDACRLRLKGFAD 217
>gi|110833623|ref|YP_692482.1| exsB protein [Alcanivorax borkumensis SK2]
gi|110646734|emb|CAL16210.1| exsB protein, putative [Alcanivorax borkumensis SK2]
Length = 227
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 116/229 (50%), Gaps = 30/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A D+ T++FDYGQR + EL+ V + L + +
Sbjct: 9 AVVLLSGGLDSATCLAIARDQGYACHTIAFDYGQRTRSELDAAERVSGVLGALSHRVIE- 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRLG 127
LG +G+I S+LT + ++++ +N +P T+VP RN +FL A LA +
Sbjct: 68 LG---------MGNIGGSALTDH-SIEVPENGGDGIPVTYVPARNTVFLSLALGLAEVID 117
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
I IGV DYSGYPDCR I A ++ L ++ V + TPLM L K + +
Sbjct: 118 AQAIFIGVNAVDYSGYPDCRPAFIEAFQSMATLATKAGVEGRPMQIETPLMHLSKAQIIQ 177
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L + +CY + + G C C +C LR +G+
Sbjct: 178 RGVALG------LDYGLTVSCY-----QADDHGNACGKCDSCRLRSQGF 215
>gi|113953927|ref|YP_732051.1| exsB protein [Synechococcus sp. CC9311]
gi|113881278|gb|ABI46236.1| exsB protein [Synechococcus sp. CC9311]
Length = 237
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 22/227 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + A+ RV LSFDYGQR++ EL+ + + K +
Sbjct: 16 TAIALLSGGLDSATAAALAIKSGFRVIGLSFDYGQRHRRELDAAVEIAKAL--------- 66
Query: 70 SLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L E H + LA+ G S + + + ++ + +PNT+VPGRN +F+ +LA
Sbjct: 67 NLAEHHTINVDLAMWGGSSLTDHAQTLPTSGVETSIIPNTYVPGRNTVFIAIGLSLAEAR 126
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +V+GV DYSGYPDCR D + A + +L + H P +W E K Q
Sbjct: 127 GADRLVLGVNAVDYSGYPDCRPDYLEAFQDLADLSSRAGREGHGPKLWAPLVEWSK--QQ 184
Query: 187 IGGQDL-VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
I + L + + +E + +CY G C C +C +R + +
Sbjct: 185 IAEEALHLGIPIERTWSCYSGGD-------VPCGVCDSCRIRDEALL 224
>gi|293609846|ref|ZP_06692148.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828298|gb|EFF86661.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123072|gb|ADY82595.1| queuosine biosynthesis protein QueC [Acinetobacter calcoaceticus
PHEA-2]
Length = 226
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 30/230 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+WA R++ + +SF YGQR+ EL+ + ++
Sbjct: 9 AIVLLSGGLDSTTCLAWAQARYECI-AISFMYGQRSTTELDAAKALAQR----------- 56
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
G +H + L ++ S+LT N+A+ Q +P T+VP RN IFL +A A
Sbjct: 57 SGVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSYALAAAEVFNA 116
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
IVIG+ DYSGYPDCR + I A L ++ V TPL+ L K +L
Sbjct: 117 EAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKANIIRL 176
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ G + ++ +CY G C C +C LR++G+++
Sbjct: 177 GIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFID 215
>gi|189039055|sp|A4VN94|QUEC_PSEU5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 224
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 110/230 (47%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A D T+SFDYGQR++ EL+ V K++ +
Sbjct: 6 AVILLSGGLDSATVVAMARDEGYACYTMSFDYGQRHRAELQAAERVAKQLAVV------- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E ++ L + G I S+LT + +P T+VP RN +FL A A LG
Sbjct: 59 --EHKVIGLNLNG-IGGSALTDTSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLGA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL L K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVAAFERMANLATKAGVEGQGFRIQAPLQNLSKAQIVRK 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ + S CY D R C C +C LR G+ E
Sbjct: 176 GSRLG----VDYAMTVS--CYQADDDGR-----ACGKCDSCRLRSAGFAE 214
>gi|217969209|ref|YP_002354443.1| exsB protein [Thauera sp. MZ1T]
gi|217506536|gb|ACK53547.1| exsB protein [Thauera sp. MZ1T]
Length = 233
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 112/231 (48%), Gaps = 29/231 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+TCL+ A D LS YGQR+ EL K++ + +
Sbjct: 8 PRAVVLLSGGLDSATCLAIARDMGFETYALSVAYGQRHAAEL----AASKRVAQALGA-- 61
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKI-QDN-NLPNTFVPGRNIIFLVFAATLAYR 125
+H LG S+LT +A+ + QDN +P T+VP RN + L A A
Sbjct: 62 ----REHRTASVELGQFGGSALTDPGIAVPLDQDNTGIPVTYVPARNTVMLSIALAWAEV 117
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGME-SHVTVHTPLMWLKKYET 180
LG +I +GV DYSGYPDCR I A E A +G+E + + +H PL+ L K +
Sbjct: 118 LGANDIFVGVNAVDYSGYPDCRPVFIEAFEHMARLATKVGVEGAQLHIHAPLIELSKADI 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G V+ L + TCY D G C C AC LR G+
Sbjct: 178 IRRGTALG----VDYGL--TVTCYQADDD-----GLACGRCEACRLRAAGF 217
>gi|329893689|ref|ZP_08269823.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC3088]
gi|328923616|gb|EGG30928.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC3088]
Length = 231
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 116/239 (48%), Gaps = 30/239 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN P A++L SGG DS+T L+ A + TLSFDYGQR++ EL ++I
Sbjct: 1 MNQDANALPKAVILVSGGLDSATVLAMAHAQGFECYTLSFDYGQRHRAEL----IAAERI 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLV 117
P H + L I S+LT + A+ + ++ +P T+VP RN IFL
Sbjct: 57 SAGYPDVT------HKVVTLNLDSIGGSALT-DTAIAVPESPTEGIPITYVPARNTIFLS 109
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHTPL 172
A A LG +I IGV DYSGYPDCR + I A E+ N+ G+E +H+ + PL
Sbjct: 110 IALGWAEVLGALDIFIGVNAVDYSGYPDCRPEFISAYESLANVATKAGVEGNHLRIQAPL 169
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K E + +G + + +CY R C C +C LR++G+
Sbjct: 170 SNLSKAEIIQQGSQLG------VDYSATVSCYQADNQGR-----ACGLCDSCRLRKEGF 217
>gi|327481487|gb|AEA84797.1| ExsB protein [Pseudomonas stutzeri DSM 4166]
Length = 224
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 110/230 (47%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A D T+SFDYGQR++ EL+ V K++ +
Sbjct: 6 AVILLSGGLDSATVVAMARDEGYACYTMSFDYGQRHRAELQAAERVAKQLAVV------- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E ++ L + G I S+LT + +P T+VP RN +FL A A LG
Sbjct: 59 --EHKVIGLNLNG-IGGSALTDTSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLGA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL L K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVAAFERMANLATKAGVEGQGFRIQAPLQNLSKAQIVRE 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ + S CY D R C C +C LR G+ E
Sbjct: 176 GSRLG----VDYAMTVS--CYQADDDGR-----ACGKCDSCRLRSAGFAE 214
>gi|189029594|sp|Q0I671|QUEC_SYNS3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 226
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 22/227 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + A+ RV LSFDYGQR++ EL+ + + K +
Sbjct: 5 TAIALLSGGLDSATAAALAIKSGFRVIGLSFDYGQRHRRELDAAVEIAKAL--------- 55
Query: 70 SLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L E H + LA+ G S + + + ++ + +PNT+VPGRN +F+ +LA
Sbjct: 56 NLAEHHTINVDLAMWGGSSLTDHAQTLPTSGVETSIIPNTYVPGRNTVFIAIGLSLAEAR 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +V+GV DYSGYPDCR D + A + +L + H P +W E K Q
Sbjct: 116 GADRLVLGVNAVDYSGYPDCRPDYLEAFQDLADLSSRAGREGHGPKLWAPLVEWSK--QQ 173
Query: 187 IGGQDL-VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
I + L + + +E + +CY G C C +C +R + +
Sbjct: 174 IAEEALHLGIPIERTWSCYSGGD-------VPCGVCDSCRIRDEALL 213
>gi|300112862|ref|YP_003759437.1| exsB protein [Nitrosococcus watsonii C-113]
gi|299538799|gb|ADJ27116.1| exsB protein [Nitrosococcus watsonii C-113]
Length = 224
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 30/232 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AP A++L SGG DS+T L+ A ++ TLSF+YGQR+ VEL+ + +++ +
Sbjct: 3 APKAVVLVSGGLDSATVLAIAREQAFICHTLSFNYGQRHSVELQAAAEISRQMGAV---- 58
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAY 124
+H LG S+LT + +M + + +P T+VP RN +FL FA A
Sbjct: 59 ------EHKCITIDLGGFGGSALT-DPSMAVPEASTGTIPITYVPARNTVFLSFALGWAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
LG +I IGV DYSGYPDCR I+A E L G+E + PL+ L K +
Sbjct: 112 VLGAQDIFIGVNAVDYSGYPDCRPAFIKAFEQLAKLATCAGLEGRSFRIQAPLLPLSKAD 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G VN + +CY + E G C C +C LR++G+
Sbjct: 172 IIREGMRLG----VN--YSRTISCY-----QADENGRACGVCDSCRLRKQGF 212
>gi|78214105|ref|YP_382884.1| ExsB [Synechococcus sp. CC9605]
gi|110816272|sp|Q3AGF3|QUEC_SYNSC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78198564|gb|ABB36329.1| ExsB [Synechococcus sp. CC9605]
Length = 226
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 28/231 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + AL++ DRV LSFDYGQR+ EL+ V +++
Sbjct: 5 TAIALLSGGLDSATAAALALEQGDRVIGLSFDYGQRHLRELDAAAAVAQQL--------- 55
Query: 70 SLGEDHILPL-------AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L E H + + + L D S S T V ++ +P T+VPGRN +F+ +L
Sbjct: 56 GLAEHHCISVNLASWGGSALTDASISIPTDGV----EEGRIPPTYVPGRNTVFISVGLSL 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G +V+GV DYSGYPDCR D + A +T +L ++ H +W + W
Sbjct: 112 AEARGAERLVLGVNAVDYSGYPDCRPDYLNAFQTLADLASKAGREGHGAQLWAPLVQ-WS 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + + +E + +CY G + C C +C +R E
Sbjct: 171 KVRIVEEALRLGVPIETTWSCYSGGT-------HPCGVCDSCRIRDAALRE 214
>gi|119367947|sp|Q0VRI8|QUEC_ALCBS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 222
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 30/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A D+ T++FDYGQR + EL+ V + L +
Sbjct: 4 AVVLLSGGLDSATCLAIARDQGYACHTIAFDYGQRTRSELDAAERVSGVLGALSHR---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRLG 127
++ L +G+I S+LT + ++++ +N +P T+VP RN +FL A LA +
Sbjct: 60 -----VIELG-MGNIGGSALTDH-SIEVPENGGDGIPVTYVPARNTVFLSLALGLAEVID 112
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
I IGV DYSGYPDCR I A ++ L ++ V + TPLM L K + +
Sbjct: 113 AQAIFIGVNAVDYSGYPDCRPAFIEAFQSMATLATKAGVEGRPMQIETPLMHLSKAQIIQ 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L + +CY + + G C C +C LR +G+
Sbjct: 173 RGVALG------LDYGLTVSCY-----QADDHGNACGKCDSCRLRSQGF 210
>gi|332975982|gb|EGK12854.1| transcription regulator ExsB [Desmospora sp. 8437]
Length = 231
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A+++ SGG DS+TC+ A + + L+F YGQR+ E+E V K
Sbjct: 2 AEKAVVVLSGGLDSTTCMGLAREAGYELYPLTFHYGQRHDREVEQARKVAKHF------- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLA 123
+ + ++ + L I S+LT + + + + D + +P+T+VP RN+IFL A A
Sbjct: 55 --GVKKHRVVDMGFLRQIGGSALTDDKMEVPVPDGSGEEIPSTYVPARNLIFLSLATAYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY 178
+G + IGV DYSGYPDCR + IR++E + G ++ V + PL+ L K
Sbjct: 113 EVIGAVKVYIGVSAVDYSGYPDCRPEFIRSMEETVRRGTKAGVNGNPIRLEAPLLHLSKG 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
ET + + + + +CY G R C C +C LR KG+ +
Sbjct: 173 ETIREGLRL------QVPYHLTTSCYRGDR-------VACGLCDSCRLRLKGFRD 214
>gi|146283134|ref|YP_001173287.1| ExsB protein [Pseudomonas stutzeri A1501]
gi|145571339|gb|ABP80445.1| ExsB protein [Pseudomonas stutzeri A1501]
Length = 241
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 110/230 (47%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A D T+SFDYGQR++ EL+ V K++ +
Sbjct: 23 AVILLSGGLDSATVVAMARDEGYACYTMSFDYGQRHRAELQAAERVAKQLAVV------- 75
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E ++ L + G I S+LT + +P T+VP RN +FL A A LG
Sbjct: 76 --EHKVIGLNLNG-IGGSALTDTSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLGA 132
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL L K + +
Sbjct: 133 RDIFIGVNAVDYSGYPDCRPEFVAAFERMANLATKAGVEGQGFRIQAPLQNLSKAQIVRK 192
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ + S CY D R C C +C LR G+ E
Sbjct: 193 GSRLG----VDYAMTVS--CYQADDDGR-----ACGKCDSCRLRSAGFAE 231
>gi|91070513|gb|ABE11420.1| hypothetical ATPase [uncultured Prochlorococcus marinus clone
HOT0M-3E5]
Length = 224
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 117/232 (50%), Gaps = 28/232 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMP 65
K S ++L SGG DSST A ++ LSFDYGQR+K EL + K +E
Sbjct: 4 KNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELNSASIIAKHFDIEEFK 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAY 124
K L L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A + A
Sbjct: 64 IIK--------LDLSLWGGSSLTDTQKNIPIEGVQTNQIPNTYVPGRNTIFISVALSYAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
+ I +GV DYSGYPDCR D I+ + +L G E++ + + TPL+ L K E
Sbjct: 116 AIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNKEE 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
KLA D ++ L+++ +CY G C C +C +R +
Sbjct: 176 IIKLAFD------NHVPLDKTWSCYSGNSKP-------CGKCDSCRIRNAAY 214
>gi|90022170|ref|YP_527997.1| ExsB protein [Saccharophagus degradans 2-40]
gi|110816257|sp|Q21HP4|QUEC_SACD2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|89951770|gb|ABD81785.1| ExsB [Saccharophagus degradans 2-40]
Length = 225
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 117/241 (48%), Gaps = 32/241 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A TLSFDYGQR++VELE V K+
Sbjct: 6 AVILVSGGLDSTTALAIAQSEGYECYTLSFDYGQRHRVELEAAQRVSDKM---------H 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + ++ L L I S+LT + +D +P T+VP RN +FL A A L
Sbjct: 57 VAQHKVVQLD-LKSIGGSALTDDDIAVPEDGPEGIPVTYVPARNTVFLSIALGWAEVLNA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLMWLKKYETWKL 183
I IGV DYSGYPDCR + I A + A +G+E + + TPL+ + K E +L
Sbjct: 116 EAIFIGVNAVDYSGYPDCRPEYIAAFQKLAMLATKVGVEGKPLQIKTPLIDMTKAEIVQL 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQ 239
+G + + +CY D G C C +C LR+KG+ ME +Y
Sbjct: 176 GMRLG------VDYSATVSCYQANVD-----GEACGRCDSCRLRRKGFEDAQMEDPTRYA 224
Query: 240 D 240
+
Sbjct: 225 N 225
>gi|123969433|ref|YP_001010291.1| ATPase [Prochlorococcus marinus str. AS9601]
gi|167016446|sp|A2BTS3|QUEC_PROMS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|123199543|gb|ABM71184.1| hypothetical ATPase [Prochlorococcus marinus str. AS9601]
Length = 224
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 117/233 (50%), Gaps = 30/233 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K S ++L SGG DSST A ++ LSFDYGQR+K EL + K
Sbjct: 4 KNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELNSASIIAKHF------ 57
Query: 67 WKDSLGEDHI--LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
+ E I L L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A + A
Sbjct: 58 ---DIDEFKIIKLDLSLWGGSSLTDTQKNIPIEGVQTNKIPNTYVPGRNTIFISVALSYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKY 178
+ I +GV DYSGYPDCR D I+ + +L G E++ + + TPL+ L K
Sbjct: 115 EAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNKE 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E KLA D ++ L+++ +CY G C C +C +R +
Sbjct: 175 EIIKLAFD------NHVPLDKTWSCYSGNSKP-------CGKCDSCRIRNAAY 214
>gi|159904365|ref|YP_001551709.1| PP-loop superfamily ATPase [Prochlorococcus marinus str. MIT 9211]
gi|159889541|gb|ABX09755.1| Predicted PP-loop superfamily ATPase [Prochlorococcus marinus str.
MIT 9211]
Length = 229
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 28/228 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P ++ L SGG DS+T + AL+ V +SFDYGQR+K ELE + + +
Sbjct: 7 PISIALLSGGLDSATATAMALEAGHNVIGISFDYGQRHKRELEAAIELAAHL-------- 58
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ LG + I + LA G S + L ++V + I +PNT+VPGRN +F+ +LA
Sbjct: 59 NLLGHEIINVNLAKWGGSSLTDLQQSVPTQGIIKGKIPNTYVPGRNTVFIAIGLSLAEAK 118
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-----LKKYETW 181
G IV+G+ DYSGYPDCR D +++ + NL ++ + P +W L K E
Sbjct: 119 GANQIVLGINAMDYSGYPDCRPDYLKSFQALANLASKAGREGNAPKLWAPLIHLNKVEII 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ A + N+ ++++ +CY G C C +C +R +
Sbjct: 179 QEALRL------NIPIDKTWSCYNGLEKP-------CGLCDSCRIRNE 213
>gi|255020131|ref|ZP_05292201.1| Queuosine Biosynthesis QueC ATPase [Acidithiobacillus caldus ATCC
51756]
gi|254970424|gb|EET27916.1| Queuosine Biosynthesis QueC ATPase [Acidithiobacillus caldus ATCC
51756]
Length = 228
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 28/233 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS+T L+ A + + LSFDYGQR+ EL+ +K+ E
Sbjct: 7 AAIVLLSGGLDSATVLAIAREAGFALHALSFDYGQRHATELQ----FARKLAEAAGVRSH 62
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + + L I G + + V + +P T+VP RN +FL +A LA LG+
Sbjct: 63 RVLK---MDLRIFGASALTDERIAVPEEPAAAGIPITYVPARNTLFLSYALALAEVLGVL 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAI----ETAINLGME--SHVTVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + I+ + A LG E +++H PL +L K + +
Sbjct: 120 DIFIGVNSQDYSGYPDCRPEFIQRFQELAQVATVLGTEKGQKLSIHAPLQYLSKAQIIRR 179
Query: 184 AQDIGGQDLVNLILEESHT--CYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G ++ +HT CY + D + G C C +C LR G+ E
Sbjct: 180 GLELG--------VDYAHTRSCY--QLDTQ---GRSCGRCDSCRLRLAGFAEL 219
>gi|152990536|ref|YP_001356258.1| ExsB family transcriptional regulator [Nitratiruptor sp. SB155-2]
gi|189038929|sp|A6Q342|QUEC_NITSB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151422397|dbj|BAF69901.1| transcriptional regulator, ExsB family [Nitratiruptor sp. SB155-2]
Length = 220
Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 29/227 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKD 69
A+++ SGG DSS A + + F+YGQR + ELE R EL K +
Sbjct: 3 AVVILSGGMDSSITAYMAKKDGYEIIAVHFNYGQRTEQKELEA---FRAIAGELNAKTYE 59
Query: 70 SLGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ L I S+L N+A+ Q + +P T+VP RN IFL AA +A +
Sbjct: 60 -------IDLPFFEQIGASALIDTNIAIPKQGIEPGIPVTYVPFRNGIFLSVAAAIAEKE 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLA 184
G +I IGV E D SGYPDCR D I+ +E+AIN G E+ + + TPL+ L+K + +L
Sbjct: 113 GADSIYIGVVEEDSSGYPDCREDFIQKMESAINAGTKPETDIKIKTPLIHLRKEDIVQLG 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + LE++ +CY + + C C +C LR KG+
Sbjct: 173 LSLG------VPLEKTWSCYESEDE-------ACGECDSCRLRLKGF 206
>gi|56476932|ref|YP_158521.1| ExsB protein [Aromatoleum aromaticum EbN1]
gi|81357766|sp|Q5P4Z2|QUEC_AZOSE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56312975|emb|CAI07620.1| similar to queC gene product; involved in queuosine biosynthesis
[Aromatoleum aromaticum EbN1]
Length = 226
Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A + LS YGQR+ EL +++ + +
Sbjct: 7 AIVLLSGGLDSATCLAIARNAGFDCYALSIAYGQRHTAEL----AAARRVAQSLDA---- 58
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+H L LG+ S+LT + V ++ +P T+VP RN + L A A LG
Sbjct: 59 --REHRLAHVSLGEFGGSALTDSSIPVPIEGAVGGIPVTYVPARNTVMLSIALAWAEVLG 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHTPLMWLKKYETWK 182
+I +GV DYSGYPDCR + I A E NL G+E + +T+H PL+ L K +
Sbjct: 117 AHDIYVGVNAVDYSGYPDCRPEFIAAFEAMANLATKAGIEGARITIHAPLIRLSKAGIIQ 176
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++ +CY + E G C C AC LR+ G+
Sbjct: 177 RGTALG------VDYAQTVSCY-----QADEAGRACGVCDACRLRKAGF 214
>gi|78485246|ref|YP_391171.1| ExsB [Thiomicrospira crunogena XCL-2]
gi|110816274|sp|Q31H76|QUEC_THICR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78363532|gb|ABB41497.1| ExsB family protein [Thiomicrospira crunogena XCL-2]
Length = 232
Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 122/241 (50%), Gaps = 34/241 (14%)
Query: 1 MNDI-IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK- 58
M D+ +KKA ++L SGG DS+T L+ A + T+SFDYGQR++ EL + +
Sbjct: 1 MADVDVKKA---VVLLSGGLDSATVLAIAQAQGFECHTISFDYGQRHRAELIAAERISRV 57
Query: 59 ---KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
K +M ++G + +I D+ S + K + +P T+VP RN +F
Sbjct: 58 SGAKTHRVMEMNMHAIGGSALTDDSI--DVPVSGVEKEM--------IPVTYVPARNTVF 107
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHT 170
L +A LA L +I IGV DYSGYPDCR + I A E NL G+E H + + T
Sbjct: 108 LSYALALAEVLEADDIFIGVNAVDYSGYPDCRPEYIAAYEKMANLATKAGVEGHKMHIQT 167
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
PL+ L K E + +G + ++ +CY ++ G C C +C LR++G
Sbjct: 168 PLIDLTKAEIIQTGVKLG------VDYSQTVSCYQADKN-----GAACGICDSCRLRKQG 216
Query: 231 W 231
+
Sbjct: 217 F 217
>gi|157414297|ref|YP_001485163.1| PP-loop superfamily ATPase [Prochlorococcus marinus str. MIT 9215]
gi|167016444|sp|A8G7J6|QUEC_PROM2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157388872|gb|ABV51577.1| Predicted PP-loop superfamily ATPase [Prochlorococcus marinus str.
MIT 9215]
Length = 224
Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 118/233 (50%), Gaps = 30/233 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K S ++L SGG DSST A ++ LSFDYGQR+K EL + K
Sbjct: 4 KNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELYSASIIAKHF------ 57
Query: 67 WKDSLGEDHI--LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
++ E I L L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A + A
Sbjct: 58 ---NIEEFKIIKLDLSLWGGSSLTDTQKNIPLEGVQTNKIPNTYVPGRNTIFISVALSYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKY 178
+ I +GV DYSGYPDCR D I+ + +L G E++ + + TPL+ L K
Sbjct: 115 EAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNKE 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E KLA ++ LE++ +CY G + C C +C +R +
Sbjct: 175 EIIKLAYS------NHVPLEKTWSCYSG-------YSKPCGKCDSCRIRNDAY 214
>gi|187251576|ref|YP_001876058.1| exsB protein [Elusimicrobium minutum Pei191]
gi|186971736|gb|ACC98721.1| ExsB protein [Elusimicrobium minutum Pei191]
Length = 484
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 32/237 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLC----VRKKIVELM 64
A++LFSGG DS+ CL WAL LS YGQ++ E+E RL V K +E+
Sbjct: 271 AVVLFSGGLDSTVCLYWALKEGYECYALSVAYGQKHLKEIEVAQRLAKQAGVTHKHIEIN 330
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
W LA + + M+ ++P+T+VP RN+IF+ A+ A
Sbjct: 331 LPW-----------LAEATSLVGGAEIPATPMEQIGKSIPSTYVPARNLIFVSLGASWAD 379
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWK 182
+G +V+G DYSGYPDC + + A+ +G + + TP++ L K E K
Sbjct: 380 SIGAEAVVLGPNAVDYSGYPDCTPQFYKPLSEAVRVGTRLGKKFEILTPIIKLNKAEIVK 439
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
L + +G LE++ TCY G C C +C LR+KG+ + E+ +
Sbjct: 440 LGRKLGAP------LEQTWTCYNGGEKP-------CGVCESCKLRRKGFEDAGEREE 483
>gi|153876460|ref|ZP_02003770.1| ExsB family protein [Beggiatoa sp. PS]
gi|152067076|gb|EDN66230.1| ExsB family protein [Beggiatoa sp. PS]
Length = 225
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LSFDYGQR+++EL+ V + + + K+
Sbjct: 4 AVILVSGGLDSTTTLAIAKSQGYACYALSFDYGQRHRIELQAARQVAEHLGVVEHKFI-- 61
Query: 71 LGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
HI L I S+LT NV + + +P T+VP RN +FL A A L
Sbjct: 62 ----HI----NLDSIGGSALTDTQINVPTQGLSDQIPITYVPARNTVFLALALGWAEVLS 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + A E N G+E H +HTPL+ L K + +
Sbjct: 114 AYHIFIGVNAVDYSGYPDCRPKFVEAFEQLANFATKAGVEGHSFKIHTPLIHLTKAQIIQ 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G NL + +CY + GY C C AC LR G+
Sbjct: 174 EGLRLGVD--YNLTI----SCYQPNPN-----GYACGMCDACRLRADGF 211
>gi|254525807|ref|ZP_05137859.1| exsB protein [Prochlorococcus marinus str. MIT 9202]
gi|221537231|gb|EEE39684.1| exsB protein [Prochlorococcus marinus str. MIT 9202]
Length = 224
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 117/233 (50%), Gaps = 30/233 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K S ++L SGG DSST A ++ LSFDYGQR+K EL + K
Sbjct: 4 KNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELYSASIIAKHF------ 57
Query: 67 WKDSLGEDHI--LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
++ E I L L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A + A
Sbjct: 58 ---NIEEFKIIKLDLSLWGGSSLTDTQKNIPLEGVQTNKIPNTYVPGRNTIFISVALSYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKY 178
+ I +GV DYSGYPDCR D I+ + +L G E++ + + TPL+ L K
Sbjct: 115 EAINADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNKE 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E KLA ++ LE++ +CY G C C +C +R +
Sbjct: 175 EIIKLAY------ANHVPLEKTWSCYSGNSKP-------CGKCDSCRIRNDAY 214
>gi|126697220|ref|YP_001092106.1| ATPase [Prochlorococcus marinus str. MIT 9301]
gi|167016442|sp|A3PFI0|QUEC_PROM0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|126544263|gb|ABO18505.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9301]
Length = 224
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 119/241 (49%), Gaps = 31/241 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMP 65
K S ++L SGG DSST A ++ LSFDYGQR+K EL + K +E
Sbjct: 4 KNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELNSASIIAKHFDIEEFK 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAY 124
K L L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A + A
Sbjct: 64 IIK--------LDLSLWGGSSLTDSQKNIPIEGVQANKIPNTYVPGRNTIFISVALSYAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
+ I +GV DYSGYPDCR D I+ + +L G E++ + + TPL+ L K E
Sbjct: 116 AIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNKEE 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
KLA D ++ +++ +CY G C C +C +R W+ K
Sbjct: 176 IIKLAFD------NHVPFDKTWSCYSGNSKP-------CGKCDSCRIRNAAYEKWLNNKN 222
Query: 237 K 237
K
Sbjct: 223 K 223
>gi|116071887|ref|ZP_01469155.1| ExsB [Synechococcus sp. BL107]
gi|116065510|gb|EAU71268.1| ExsB [Synechococcus sp. BL107]
Length = 226
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 112/228 (49%), Gaps = 22/228 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + A + DRV LSFDYGQR++ EL+ V +
Sbjct: 5 TAIALLSGGLDSATAAALAQESGDRVIGLSFDYGQRHRRELKAAAKVAAHL--------- 55
Query: 70 SLGEDHILPLAILGDISHSSLT---KNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L E H + + LG S+LT + V +++ +P T+VPGRN +F+ +LA
Sbjct: 56 NLAEHHQVDVN-LGAWGGSALTDPNQTVPTSGVEEGVIPVTYVPGRNTVFIAIGLSLAEA 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G +V+GV DYSGYPDCR D + A ++ +L ++ H P +W E W +
Sbjct: 115 RGAERLVLGVNAVDYSGYPDCRPDYLDAFQSLASLSSKAGREGHGPQLWAPLVE-WSKTK 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + + E+ +CY G C C +C +R E
Sbjct: 174 IVDEALRLGVPINETWSCYSGGNRP-------CGVCDSCRIRDSALRE 214
>gi|220935393|ref|YP_002514292.1| ExsB ATPase [Thioalkalivibrio sp. HL-EbGR7]
gi|219996703|gb|ACL73305.1| ExsB ATPase [Thioalkalivibrio sp. HL-EbGR7]
Length = 229
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 112/231 (48%), Gaps = 28/231 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS+T L+ A ++ LSF YGQR++ EL+ V K + + D
Sbjct: 7 NAVVLLSGGMDSATVLAIAREQGYVCHALSFRYGQRHRAELDAAARVAKSQGAVRHQVVD 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L L++ G S+LT + + +P T+VP RN +FL A A L
Sbjct: 67 -------LDLSLFGG---SALTDSRIDLPETPSEGIPVTYVPARNTVFLSVALAWAEVLP 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR I A E NL + V ++H PL +L K + +
Sbjct: 117 ARDIFIGVNAVDYSGYPDCRPAFIEAFERLANLATRAGVEGRQLSIHAPLQYLSKADIIR 176
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
++G + E+ TCY G K G C C AC LR +G+ +
Sbjct: 177 RGTELG------VDFAETVTCY-GADAK----GLACGVCDACRLRAQGFAD 216
>gi|152992854|ref|YP_001358575.1| ExsB family transcriptional regulator [Sulfurovum sp. NBC37-1]
gi|167016454|sp|A6Q9Q9|QUEC_SULNB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151424715|dbj|BAF72218.1| transcriptional regulator, ExsB family [Sulfurovum sp. NBC37-1]
Length = 222
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 28/227 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A + + L F+YGQR + ELEC RK EL
Sbjct: 5 AVCIISGGMDSALSAKIAQEEGYEIIALHFNYGQRTRNKELEC---FRKITQEL------ 55
Query: 70 SLGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E + + L I S+LT K++ + I + +P T+VP RN IFL AA +A +
Sbjct: 56 NASESYEIDLDFFEQIGASALTDKSIDVPIGGLEEGVPVTYVPFRNGIFLSIAAAIAEKH 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLA 184
G + IGV E D SGYPDCR I ++ AINLG E+++ + PL+ L+K + + A
Sbjct: 116 GAEALFIGVVEEDSSGYPDCRESYIEQMQKAINLGTKDETNIEIKMPLVSLRKSQIVQKA 175
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G + LE++ +CY + C C +C LR +G+
Sbjct: 176 IELG------VPLEDTWSCYQAED-------AACGVCDSCRLRLRGF 209
>gi|256823061|ref|YP_003147024.1| exsB protein [Kangiella koreensis DSM 16069]
gi|256796600|gb|ACV27256.1| exsB protein [Kangiella koreensis DSM 16069]
Length = 224
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 114/229 (49%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + +SF+YGQR+ EL KKI + +
Sbjct: 5 AVVLLSGGLDSTTALAMAKSQGYDCYAMSFNYGQRSLAELN----AAKKIAQSLD----- 55
Query: 71 LGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++HI+ + I S+LT +V + + +P T+VP RN +FL A A L
Sbjct: 56 -AKEHIVVNLDMSQIGGSALTDHSIDVPTEGLEEGIPVTYVPARNTVFLSIALGWAEVLK 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + I+A ET NL ++ V T+ PL+ L K
Sbjct: 115 ADHIFIGVNAVDYSGYPDCRPEFIKAFETMANLATKAGVEGQKLTIEAPLINLTK----- 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
AQ I + + ++ +CY D G C C +C LR++G+
Sbjct: 170 -AQIIAEGMTLGVDYSQTVSCYKATDD-----GKACGVCDSCRLRKQGF 212
>gi|332709791|ref|ZP_08429748.1| preQ(0) biosynthesis protein QueC [Lyngbya majuscula 3L]
gi|332351389|gb|EGJ30972.1| preQ(0) biosynthesis protein QueC [Lyngbya majuscula 3L]
Length = 228
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 112/236 (47%), Gaps = 37/236 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-------RKKIVEL- 63
++L SGG DS+T L ++ LSFDY QR++ EL+ + ++V
Sbjct: 6 IVLLSGGLDSATVLYQSVGDGYECYALSFDYQQRHRRELKSAYAIATAAGVKEHQVVRFD 65
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +W S D L L K +++ +P T+VP RN IFL F + A
Sbjct: 66 LRQWGGSALTDDNL-----------DLPKERSLEQMSQEIPITYVPARNTIFLSFGLSYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
+G + +GV DYSGYPDCR D I+A++TA +LG + + + + TPL+ LKK
Sbjct: 115 EAIGAEGVYVGVNALDYSGYPDCRPDYIKAMQTAFDLGTKQGREGNGIKIFTPLIDLKKT 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
E +L +G + E++ +CY G C C AC LR + E
Sbjct: 175 EIIQLGNQLG------VPWEKTWSCYTGND-------LACGVCDACRLRLAAFAEL 217
>gi|85860086|ref|YP_462288.1| queuosine biosynthesis protein [Syntrophus aciditrophicus SB]
gi|110816269|sp|Q2LVL3|QUEC_SYNAS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|85723177|gb|ABC78120.1| queuosine biosynthesis protein [Syntrophus aciditrophicus SB]
Length = 231
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 116/239 (48%), Gaps = 41/239 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A + L+F YGQR+ VELE R+ L K
Sbjct: 7 AVVLLSGGLDSATTMAIAKAENYELYALTFQYGQRHAVELEA---ARRIAAALGAK---- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM-KIQDNN-----LPNTFVPGRNIIFLVFAATLAY 124
+H+ L I S+LT + K Q+ +P T+VP RN IFL +A A
Sbjct: 60 ---EHLFISIDLRIIGGSALTGPFEVPKKQEGEETSAEIPVTYVPARNTIFLSYALAWAE 116
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKY 178
L I+ I IGV DYSGYPDCR + I A E NL +++ V + TPL+ L K
Sbjct: 117 VLQISEIFIGVNAVDYSGYPDCRPEYITAFEAMANLAIKAAVEGTMRVKIRTPLIDLSKA 176
Query: 179 ETWK----LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + L+ D G +H+CY D G C C +C+LR+KG+ E
Sbjct: 177 DIIRKGMALSVDYG----------LTHSCYDPLPD-----GKPCGQCDSCHLRRKGFRE 220
>gi|325981314|ref|YP_004293716.1| exsB protein [Nitrosomonas sp. AL212]
gi|325530833|gb|ADZ25554.1| exsB protein [Nitrosomonas sp. AL212]
Length = 225
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 109/226 (48%), Gaps = 23/226 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + R LS DYGQRN EL +KI + + K
Sbjct: 4 AIVLLSGGLDSATTLAIAHGQGFRCYALSIDYGQRNFAELN----AAQKIAQSLDSHKHQ 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + + L G + + + V ++ +P T+VP RN I L A A L +
Sbjct: 60 IIK---IDLTAFGGSALTDQSIKVPTSGENPGIPVTYVPARNTIMLSLALAWAETLDCQD 116
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKLAQ 185
I GV DYSGYPDCR + I+A NL ++ V T+HTPLM L K + +
Sbjct: 117 IFTGVNAVDYSGYPDCRAEYIQAFGIMANLATKASVEGKQLTIHTPLMLLSKQQIIQTGL 176
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY + E G C C +C +R+ G+
Sbjct: 177 ALG----VDYSLTVS--CY-----QADEAGQACGVCDSCRIRKAGF 211
>gi|78780169|ref|YP_398281.1| ExsB [Prochlorococcus marinus str. MIT 9312]
gi|110816241|sp|Q317V0|QUEC_PROM9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78713668|gb|ABB50845.1| preQ(0) biosynthesis protein QueC [Prochlorococcus marinus str. MIT
9312]
Length = 224
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 117/233 (50%), Gaps = 30/233 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K S ++L SGG DSST S A ++ LSFDYGQR+K EL + K
Sbjct: 4 KNKSIVVLLSGGLDSSTVTSIAKKSEAKIFGLSFDYGQRHKKELHSASTIAKHF------ 57
Query: 67 WKDSLGEDHI--LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
+ E I L L++ G S + KN+ + +Q N +PNT+VPGRN IF+ A + A
Sbjct: 58 ---DIQEFKIIKLDLSLWGGSSLTDTKKNIPTEGVQTNKIPNTYVPGRNTIFISVALSYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKY 178
+ I +GV DYSGYPDCR D I+ + +L G E++ + + TPL+ L K
Sbjct: 115 EAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNKE 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +LA D ++ L+++ +CY G C C +C +R +
Sbjct: 175 QIIQLAMD------NHVPLDKTWSCYSGD-------AKPCGKCDSCRIRNTAY 214
>gi|330950597|gb|EGH50857.1| ExsB [Pseudomonas syringae Cit 7]
Length = 229
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYTCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG----VDYSLTVS--CY-----QADDQGRACGKCDSCRLRAEGF 217
>gi|72383131|ref|YP_292486.1| ExsB [Prochlorococcus marinus str. NATL2A]
gi|110816242|sp|Q46I95|QUEC_PROMT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|72002981|gb|AAZ58783.1| preQ(0) biosynthesis protein QueC [Prochlorococcus marinus str.
NATL2A]
Length = 225
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 32/234 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + L SGG DS+T A++ +V LSFDYGQR+ EL+ + K +
Sbjct: 5 TTIALLSGGIDSATAACIAMEAGQKVIGLSFDYGQRHLKELQAAADLAKNLNL------- 57
Query: 70 SLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
EDHI L SSLT IQ N +PNT+VPGRN IF+ +LA
Sbjct: 58 ---EDHITIKIDLSSWGGSSLTDTSQAIPTQGIQKNTIPNTYVPGRNTIFVAIGLSLAEA 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYET 180
G I +G+ DYSGYPDCR D ++A + NL G E + + + PL+ +K +
Sbjct: 115 RGANRIALGINAMDYSGYPDCRPDYLKAYQELANLSSRVGREGNGIKLWAPLLDWEKTKI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++ A + + +E++ +CY G+ C C +C +R K E
Sbjct: 175 FEEALRL------KIPIEKTWSCYQGESKP-------CGKCDSCRIRDKALKEI 215
>gi|330964834|gb|EGH65094.1| exsB protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 229
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG----VDYALTVS--CY-----QADDQGRACGKCDSCRLRAEGF 217
>gi|213969195|ref|ZP_03397334.1| exsB protein [Pseudomonas syringae pv. tomato T1]
gi|301384810|ref|ZP_07233228.1| exsB protein [Pseudomonas syringae pv. tomato Max13]
gi|302130600|ref|ZP_07256590.1| exsB protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213926193|gb|EEB59749.1| exsB protein [Pseudomonas syringae pv. tomato T1]
Length = 229
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG----VDYALTVS--CY-----QADDQGRACGKCDSCRLRAEGF 217
>gi|124026870|ref|YP_001015985.1| ATPase [Prochlorococcus marinus str. NATL1A]
gi|167016443|sp|A2C5G1|QUEC_PROM1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|123961938|gb|ABM76721.1| hypothetical ATPase [Prochlorococcus marinus str. NATL1A]
Length = 225
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 32/234 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + L SGG DS+T A++ +V LSFDYGQR+ EL+ + K +
Sbjct: 5 TTIALLSGGIDSATAACIAMEAGQKVIGLSFDYGQRHLKELQAAADLAKNLNL------- 57
Query: 70 SLGEDHI---LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
EDHI + L+ G S + ++ + K IQ N +PNT+VPGRN IF+ +LA
Sbjct: 58 ---EDHITIKIDLSSWGGSSLTDTSQAIPTKGIQKNTIPNTYVPGRNTIFVAIGLSLAEA 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYET 180
G I +G+ DYSGYPDCR D ++A + NL G E + + PL+ +K +
Sbjct: 115 RGANRIALGINAMDYSGYPDCRPDYLKAYQELANLSSRVGREGKGIKLWAPLLDWEKTKI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++ A + + +E++ +CY G+ C C +C +R K E
Sbjct: 175 FEEALRL------KIPIEKTWSCYQGESKP-------CGRCDSCRIRDKALKEI 215
>gi|330502229|ref|YP_004379098.1| ExsB protein [Pseudomonas mendocina NK-01]
gi|328916515|gb|AEB57346.1| ExsB protein [Pseudomonas mendocina NK-01]
Length = 224
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 120/239 (50%), Gaps = 33/239 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MND KKA ++L SGG DS+T ++ A ++SFDYGQR++ EL+ V +++
Sbjct: 1 MND--KKA---VILLSGGLDSATVVAMARAEGYACYSMSFDYGQRHRAELQAAERVARQL 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P+T+VP RN +FL
Sbjct: 56 ---------GVVEHKVIGLNLNG-IGGSALTDSSIAVPEAPTEGIPSTYVPARNTVFLAL 105
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A L +I IGV DYSGYPDCR + + A E NL ++ V ++ PL
Sbjct: 106 ALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVQGQSFSIRAPLQ 165
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K E ++ +G V+ L S CY D R C C +C LR G++
Sbjct: 166 QMSKAEIIQVGMSLG----VDYALTVS--CYQADDDGR-----ACGKCDSCRLRAAGFV 213
>gi|152968323|ref|YP_001364107.1| exsB protein [Kineococcus radiotolerans SRS30216]
gi|189038919|sp|A6WGA4|QUEC_KINRD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151362840|gb|ABS05843.1| exsB protein [Kineococcus radiotolerans SRS30216]
Length = 229
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 110/234 (47%), Gaps = 32/234 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LSF YGQR+ VEL+ R+ L
Sbjct: 5 AVVLLSGGLDSTTVLAIAKSQGFTPYALSFAYGQRHAVELDA---ARRVATALGAAG--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAY 124
H++ L S+LT ++A+ D ++P T+VP RN IFL +A A
Sbjct: 59 ----HVIATIDLTVFGGSALTADIAVPKHDTVEDLQADIPITYVPARNTIFLSYALAYAE 114
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
+G +I IGV DYSGYPDCR + + A + L + V T+H PLM + K +
Sbjct: 115 VVGAGDIFIGVNALDYSGYPDCRPEYVDAFQAMGRLATRAGVQGTELTIHAPLMQMTKAD 174
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G V+ + S CY G+ C C +C LR G+ E
Sbjct: 175 IVRAGLALG----VDYGMTSS--CY-----DPDAAGHPCGHCDSCLLRLNGFAE 217
>gi|330896139|gb|EGH28360.1| ExsB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 229
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGAALG----VDYSLTVS--CY-----QADDQGRACGKCDSCRLRAEGF 217
>gi|330872643|gb|EGH06792.1| exsB protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 229
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + R C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG----VDYALTVS--CYQADDEGR-----ACGRCDSCRLRAEGF 217
>gi|66044667|ref|YP_234508.1| ExsB [Pseudomonas syringae pv. syringae B728a]
gi|302187147|ref|ZP_07263820.1| ExsB [Pseudomonas syringae pv. syringae 642]
gi|75502945|sp|Q4ZWK2|QUEC_PSEU2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|63255374|gb|AAY36470.1| ExsB [Pseudomonas syringae pv. syringae B728a]
gi|330968881|gb|EGH68947.1| ExsB [Pseudomonas syringae pv. aceris str. M302273PT]
gi|330975317|gb|EGH75383.1| ExsB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 229
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG----VDYSLTVS--CY-----QADDQGRACGKCDSCRLRAEGF 217
>gi|258516746|ref|YP_003192968.1| exsB protein [Desulfotomaculum acetoxidans DSM 771]
gi|257780451|gb|ACV64345.1| exsB protein [Desulfotomaculum acetoxidans DSM 771]
Length = 229
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 35/237 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+++ SGG DS+ C+++A R + ++F+YGQR+ E+ KKI +
Sbjct: 3 NAVIILSGGMDSTVCMAYAGSREYNLYPITFNYGQRHAYEVG----QAKKIASYFQSNRH 58
Query: 70 SLGEDHILPLAILGDISHSSLTK-------NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ LA +I S+LT N K + +P T+VP RN +FL A
Sbjct: 59 -----LVVDLAFFREIGGSALTSEAIELPLNRTEKEIGSGIPITYVPFRNGVFLSLAVAY 113
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLK 176
A + I IGV DYSGYPDCR + I A +T I+ G + + + TPL++
Sbjct: 114 AEAVKAQAIFIGVNALDYSGYPDCRPEFIEAYQTVIDAGTKQASEDKQKLQIITPLLYKT 173
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K E K+ D+ L+ + +CY G+ C C +C LR KG+ E
Sbjct: 174 KAEIVKMGMDLAAP------LQLTTSCYRGEE-------LACGRCDSCLLRLKGFSE 217
>gi|257487000|ref|ZP_05641041.1| exsB protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289626506|ref|ZP_06459460.1| exsB protein [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289650952|ref|ZP_06482295.1| exsB protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|298488199|ref|ZP_07006235.1| Queuosine Biosynthesis QueC ATPase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157257|gb|EFH98341.1| Queuosine Biosynthesis QueC ATPase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320323042|gb|EFW79131.1| exsB protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320329686|gb|EFW85675.1| exsB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330868622|gb|EGH03331.1| exsB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330892250|gb|EGH24911.1| exsB protein [Pseudomonas syringae pv. mori str. 301020]
gi|330988979|gb|EGH87082.1| exsB protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331009358|gb|EGH89414.1| exsB protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 229
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPITYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGAALG----VDYSLTVS--CY-----QADDQGRACGKCDSCRLRAEGF 217
>gi|198282217|ref|YP_002218538.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665551|ref|YP_002424582.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198246738|gb|ACH82331.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517764|gb|ACK78350.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 229
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 122/249 (48%), Gaps = 41/249 (16%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
A A++L SGG DS+T L AL R D V LSFDYGQR+K EL + L+
Sbjct: 5 ATPAIVLLSGGLDSATVL--ALMRRDGFAVHALSFDYGQRHKEEL--------RYAALLA 54
Query: 66 KWKDSLGEDHILPLAI-LGDISHSSLTKNVAMKIQDNNL----PNTFVPGRNIIFLVFAA 120
+ S+G L I L S+LT + + I + L P T+VP RN +FL A
Sbjct: 55 Q---SMGAASHRVLRIDLAAFGGSALT-DPQLSIPETGLAPGIPITYVPARNTVFLSLAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLMWL 175
LA LG +I +GV DYSGYPDCR + ++A E A LG E+ +H PL +L
Sbjct: 111 ALAEVLGARDIFLGVNSQDYSGYPDCRAEFVQAFEALAQVATRLGDEARGPRIHAPLQFL 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF- 234
K E +L +G V+ + S CY + G C C +C LR++G+ +
Sbjct: 171 NKSEIIRLGSRLG----VDYGMTRS--CY-----QLDAEGRSCGRCDSCRLRREGFRQAG 219
Query: 235 ---KEKYQD 240
YQD
Sbjct: 220 IADPTPYQD 228
>gi|260222251|emb|CBA31627.1| hypothetical protein Csp_D28070 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 143
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 65/81 (80%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL+ AL R++RVET++FDY QR+ VELE RL V ++I P+W
Sbjct: 4 SALVLFSGGQDSTTCLAHALARYERVETIAFDYRQRHNVELEARLNVLREIKTRFPQWAA 63
Query: 70 SLGEDHILPLAILGDISHSSL 90
LGEDH+L LA+LG++S +SL
Sbjct: 64 KLGEDHLLDLAVLGEVSETSL 84
>gi|71735695|ref|YP_275903.1| exsB protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|110816243|sp|Q48FD4|QUEC_PSE14 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|71556248|gb|AAZ35459.1| exsB protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 229
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPITYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGAALG----VDYSLTVS--CY-----QADDQGRACGKCDSCRLRTEGF 217
>gi|331016449|gb|EGH96505.1| exsB protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 229
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGIALG----VDYALTVS--CY-----QADDQGRACGKCDSCRLRAEGF 217
>gi|330936707|gb|EGH40895.1| ExsB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 229
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 116/238 (48%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY R C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG----VDYSLTVS--CYQADNQGR-----ACGKCDSCRLRAEGF 217
>gi|318040804|ref|ZP_07972760.1| ExsB [Synechococcus sp. CB0101]
Length = 225
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 22/228 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + AL+ RV LSFDYGQR++ ELE + ++
Sbjct: 3 TAIALLSGGLDSATAAALALEDGQRVIGLSFDYGQRHRRELEAAARIAAQL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L E H + + L S+LT + + +Q + +P+T+VPGRN +F+ +LA
Sbjct: 54 GLAEHHTISVN-LAAWGGSALTDSRMAVPSDGVQADVIPSTYVPGRNTVFIAIGLSLAEA 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G +V+GV DYSGYPDCR D + A + +L ++ H +W TW +
Sbjct: 113 RGAERLVLGVNAVDYSGYPDCRPDYLDAFQRLADLASKAGREGHGSRLW-APLVTWSKTK 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + + ++ +CY G C C +C +R ++
Sbjct: 172 IVQEALRLGVPIADTWSCYSGGEQP-------CGVCDSCRIRDAALID 212
>gi|289674881|ref|ZP_06495771.1| ExsB [Pseudomonas syringae pv. syringae FF5]
Length = 229
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G V+ L S CY + + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG----VDYSLTVS--CY-----QADDHGRACGKCDSCRLRAEGF 217
>gi|94495451|ref|ZP_01302031.1| ExsB [Sphingomonas sp. SKA58]
gi|94424839|gb|EAT09860.1| ExsB [Sphingomonas sp. SKA58]
Length = 233
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS + A + R+ LS DY QR++VEL V + + +
Sbjct: 9 AVVLLSGGLDSMVAGALAREAGYRLFALSIDYNQRHRVELRAAARVAQALNAI------- 61
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+LPL + S+LT ++A+ +++P T+VP RN IFL LA G
Sbjct: 62 --RHIVLPLDLTA-FGGSALTADIAVPKSGVGSDIPVTYVPARNTIFLSLTLGLAEVAGA 118
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLMWLKKYETWKL 183
++I IGV DYSGYPDCR + I A + A G+E H + ++TPL ++ K + +
Sbjct: 119 SDIFIGVNALDYSGYPDCRPEFIDAFQKMATLATKAGVEGHPIRINTPLQYMTKADIARE 178
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
A +G L S +CY D ++ C C +C LR KG+ E
Sbjct: 179 ADRLG------LDAGISWSCYDPTPDGKH-----CGLCDSCRLRSKGYQE 217
>gi|254787331|ref|YP_003074760.1| ExsB protein [Teredinibacter turnerae T7901]
gi|237683716|gb|ACR10980.1| ExsB protein [Teredinibacter turnerae T7901]
Length = 224
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 117/230 (50%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A D+ TLSFDYGQR++ EL+ +++ + M +
Sbjct: 5 AVVLVSGGLDSATVLAMAKDQGYECFTLSFDYGQRHRAELQ----AAERVAQAMGAAQ-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
H + L I S+LT + + + + +P T+VP RN +FL A A +G
Sbjct: 59 ----HKVVSLDLRTIGGSALTDDSISVPEGETSGIPVTYVPARNTVFLSIALGWAEVVGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETWKL 183
I IGV DYSGYPDCR + I+A + +L G+E V + TPL+ L K
Sbjct: 115 QAIFIGVNAVDYSGYPDCRPEYIKAYQAMADLATKAGVEGRGVAIKTPLIELSK------ 168
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
A I +++ + +CY D R C C +C LR++G+++
Sbjct: 169 ADIICHGHALHVDYALTVSCYQADDDGR-----ACGKCDSCRLRRRGFLD 213
>gi|325111074|ref|YP_004272142.1| preQ(0) biosynthesis protein QueC [Planctomyces brasiliensis DSM
5305]
gi|324971342|gb|ADY62120.1| preQ(0) biosynthesis protein QueC [Planctomyces brasiliensis DSM
5305]
Length = 230
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L+ A ++ + +SFDYGQ+++ EL+ +++ + K
Sbjct: 7 AVVLLSGGLDSSTTLAIAREQGFELWAISFDYGQKHRFELD----AARRLAQAFDVKK-- 60
Query: 71 LGEDHILPLAILGDISHSSLTKNV------AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
H++ LG S+LT ++ + + +P T+VP RN +FL A A
Sbjct: 61 ----HVIVKIDLGAFGGSALTSDIEVPKDRSTDQMEAAIPITYVPARNTVFLSTALGWAE 116
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKY 178
L +++ IGV DYSGYPDCR + + A NL ++ V VH PL+ L K
Sbjct: 117 TLDCSDLFIGVNAVDYSGYPDCRPEFVEAFTRLANLATKTGVEGTADWKVHAPLIDLTKA 176
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + +G V+ + +HTCY E G C C AC LR +G+ +
Sbjct: 177 DIIRKGTALG----VDYAM--THTCY-----DPNEAGLACGHCDACQLRLQGFEQ 220
>gi|57505254|ref|ZP_00371183.1| exsB protein [Campylobacter upsaliensis RM3195]
gi|57016390|gb|EAL53175.1| exsB protein [Campylobacter upsaliensis RM3195]
Length = 231
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 114/228 (50%), Gaps = 29/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKD 69
AL + SGG DS+ C A + L FDY QR + E EC +I E + K
Sbjct: 4 ALCVISGGMDSTLCAYLAKKEGFEIIALHFDYNQRTERKEKECF----HQICEHLGVLKH 59
Query: 70 SLGEDHILPLAILGDISHSSLT-KNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++L + L DI ++L +++A+ + N LPNT+VP RN IFL AA+LA +
Sbjct: 60 -----YVLNASFLKDIGGNALVDESLAVPKNALHQNALPNTYVPFRNGIFLSIAASLAEK 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G + IGV E D SGYPDC + I+ E IN G +++ PL++L K E L
Sbjct: 115 EGCEALYIGVVEEDSSGYPDCSENFIKKAENFINEGTSEGFKLSIKMPLVYLSKAEIVSL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A N+ LE + +CY DK C +C +C LR KG+
Sbjct: 175 ALK------ENVPLELTWSCY-ESEDK------ACGACDSCLLRLKGF 209
>gi|168702722|ref|ZP_02734999.1| exsB protein [Gemmata obscuriglobus UQM 2246]
Length = 230
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 114/235 (48%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS DYGQR++VELE R V K + ++
Sbjct: 4 AVVLLSGGLDSTTALAVARGQGFECYALSVDYGQRHRVELE-RAAVVAKALGVI------ 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNIIFLVFAATLAY 124
+H L +I S+LT ++A+ ++ +P T+VP RN I L A A
Sbjct: 57 ---EHRTVKLDLREIGGSALTSDLAVPKDRSDGEMGHGVPVTYVPARNTILLGVALGFAE 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKY 178
+G +I IG DYSGYPDCR + + A E NL ++ VH+PL+ L K
Sbjct: 114 VVGAFDIFIGANVLDYSGYPDCRPEFLSAFEALANLATKAGTEGAGRFRVHSPLLKLTKA 173
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E + +G + ++ +CY G C C +C LR+KG+ E
Sbjct: 174 EIIREGVKLG------VDYAQTLSCY-----DPDAAGRACGRCDSCLLRKKGFAE 217
>gi|282889960|ref|ZP_06298495.1| hypothetical protein pah_c008o049 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500153|gb|EFB42437.1| hypothetical protein pah_c008o049 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 231
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 123/238 (51%), Gaps = 29/238 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K A+++ SGG DSS CL+ A+ F + V +LSF Y QR+ ELE KKI +
Sbjct: 1 MKLQKKAVVIHSGGMDSSICLALAIRTFSVENVLSLSFIYDQRHSSELE----QAKKICQ 56
Query: 63 LMPKWKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNN--LPNTFVPGRNIIFLVFA 119
S DH IL + L +I+ ++LT + ++ IQ N PNT V GRN +
Sbjct: 57 -------SWNVDHIILSIPCLKEITTNALT-DTSLPIQCGNGEAPNTLVVGRNGLMAQLG 108
Query: 120 ATLAYRLGITNIVIGV--CETDYSGYPDCRHDTIRAIET-AINLGMESHVTVHTPLMWLK 176
A A+ LG I +G+ E ++SGY DC + +T + T+ TPL+ +
Sbjct: 109 AIHAHELGAHCIYMGIIGVEGNHSGYRDCSRAYMDLKQTLLRLDLDDHLFTIETPLVDMS 168
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K +T +LAQ++G ++ +L E+ TCY G GC CPAC LR +G +F
Sbjct: 169 KKKTLELAQEMG---VLEFLLNETITCYEGLEK------LGCQKCPACILRNEGIRQF 217
>gi|114330320|ref|YP_746542.1| exsB protein [Nitrosomonas eutropha C91]
gi|122941346|sp|Q0AJ94|QUEC_NITEC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114307334|gb|ABI58577.1| preQ(0) biosynthesis protein QueC [Nitrosomonas eutropha C91]
Length = 226
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 23/226 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A LS DYGQR+ EL +I +L+ +
Sbjct: 4 AVVLLSGGLDSTTTLAIARGNGFACYALSVDYGQRHAAELA----AATRIGQLLQVCEHQ 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ L L +L + + + V + + +P T+VP RN I L A A LG +
Sbjct: 60 FLK---LDLTVLASSALTDPSVTVPIHGTNRGIPATYVPARNTIMLSLALAWAEVLGSQD 116
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKLAQ 185
I IGV DYSGYPDCR D I A E NL ++ + VH PL+ L K++ +
Sbjct: 117 IFIGVTAVDYSGYPDCRPDYIDAFEKMANLATKAGREGNLLKVHAPLINLPKHDIIRRGL 176
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G + + +CY G+ C C AC++R+ G+
Sbjct: 177 ELG------IDYSMTVSCYQADAS-----GWACGQCDACHIRRAGF 211
>gi|146306313|ref|YP_001186778.1| exsB protein [Pseudomonas mendocina ymp]
gi|189038935|sp|A4XRT0|QUEC_PSEMY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|145574514|gb|ABP84046.1| preQ(0) biosynthesis protein QueC [Pseudomonas mendocina ymp]
Length = 224
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A ++SFDYGQR++ EL+ V +++
Sbjct: 6 AVILLSGGLDSATVVAMARAEGYACYSMSFDYGQRHRAELQAAERVARQL---------G 56
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL A A LG
Sbjct: 57 VVEHKVVGLNLNG-IGGSALTDSSIAVPETPGEGIPVTYVPARNTVFLSLALGWAEVLGA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL + K E +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFAIRAPLQQMSKGEIIQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY D R C C +C LR G+
Sbjct: 176 GMRLG----VDYALTVS--CYQADDDGR-----ACGKCDSCRLRAAGF 212
>gi|28871113|ref|NP_793732.1| exsB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|81730072|sp|Q87Y44|QUEC_PSESM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|28854363|gb|AAO57427.1| exsB protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 226
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 114/228 (50%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + + +
Sbjct: 8 AVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDLGAV------- 60
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E ++ L + G I S+LT ++A+ + +P T+VP RN +FL A A LG
Sbjct: 61 --EHKVIGLNLSG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSLALGWAEVLGA 117
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + + E NL ++ V T+ PL L K + K
Sbjct: 118 RDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNLSKSDIVKA 177
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY + + G C C +C LR +G+
Sbjct: 178 GIALG----VDYALTVS--CY-----QADDQGRACGKCDSCRLRAEGF 214
>gi|163783753|ref|ZP_02178739.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
gi|159880999|gb|EDP74517.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
Length = 215
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 117/230 (50%), Gaps = 33/230 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L A FD+V +SFDYGQR++VEL+ K + EL
Sbjct: 4 AIVLLSGGMDSATLLWLAKREFDKVWAISFDYGQRHQVELK----YAKGLAELA-----E 54
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E I+ L I I S+L ++V + +D N P T VP RN+ FL A+ A L
Sbjct: 55 VEEHIIVKLPIYESIKGSALIDESVEVPSEDYPENEPPITTVPMRNLNFLSIASAFADAL 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG----MESHVTVH--TPLMWLKKYET 180
I +I IGV D + YPDCR + I + E+AIN G + V +H P + + K E
Sbjct: 115 EIDHIGIGVHALD-TPYPDCRPEFITSAESAINAGSILTAKKKVRIHVWAPFLGMSKREI 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
L +++G + E++++CY G C CP C R++
Sbjct: 174 ALLGKELG------VPYEKTYSCYRGTEPP-------CGECPTCRQREEA 210
>gi|186684589|ref|YP_001867785.1| exsB protein [Nostoc punctiforme PCC 73102]
gi|254764363|sp|B2IUR7|QUEC_NOSP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|186467041|gb|ACC82842.1| exsB protein [Nostoc punctiforme PCC 73102]
Length = 224
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK-------IVEL 63
A++L SGG DSST L A +SFDY QR++ EL+ L V KK +V
Sbjct: 3 AVILLSGGLDSSTILYKAKADGCECHAISFDYQQRHRQELQSALTVAKKAAIAKHQVVNF 62
Query: 64 -MPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ +W S L +D I L + ++ N+P T+VP RN IFL FA
Sbjct: 63 DLRQWGGSALTDDAI------------DLPQQRSLDEMSQNIPVTYVPARNTIFLSFALG 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLK 176
A + + IGV DYSGYPDCR D I A++ LG + + + PL+ LK
Sbjct: 111 YAEAIAAERVYIGVNALDYSGYPDCRPDYIEAMQEVFRLGTKQGREGQPIKIVAPLINLK 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K E +L ++G + E + +CY G C C +C LR + E
Sbjct: 171 KTEIIQLGNELG------VPWELTWSCYAGN-------DVACGVCDSCRLRLAAFAEL 215
>gi|67458609|ref|YP_246233.1| trans-regulatory protein ExsB [Rickettsia felis URRWXCal2]
gi|75536925|sp|Q4UMZ0|QUEC_RICFE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|67004142|gb|AAY61068.1| Trans-regulatory protein ExsB [Rickettsia felis URRWXCal2]
Length = 224
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 117/239 (48%), Gaps = 32/239 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + + +SF+YGQRN EL +K+ EL+ ++
Sbjct: 4 AVILVSGGADSATVLAIAREMGYEIHAMSFNYGQRNNAEL-------RKVKELIKEYN-- 54
Query: 71 LGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPN----TFVPGRNIIFLVFAATLA 123
+ H + L S+LT N V N LP T+VP RN IFL +A A
Sbjct: 55 -VKQHKIVYIDLRAFGGSALTDNNIDVPHYHDVNELPEDVPVTYVPARNTIFLSYALGYA 113
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETW 181
+G +I IGV +D + YPDCR + I++ E NL + + +T+HTPL+ + K +
Sbjct: 114 EVIGAKDIFIGVHTSDSANYPDCRPEYIKSFEEMANLATNIGNRITIHTPLIDMAKEQII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
K ++ G D N I +CY D C +C AC +R + K QD
Sbjct: 174 KTGLEL-GVDYKNTI-----SCYDPTEDD-----LSCGNCLACMIRLDAFK--KNNVQD 219
>gi|254457915|ref|ZP_05071342.1| exsB protein [Campylobacterales bacterium GD 1]
gi|207085308|gb|EDZ62593.1| exsB protein [Campylobacterales bacterium GD 1]
Length = 224
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 120/237 (50%), Gaps = 31/237 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKK 59
MN+ KKA L + SGG DS+ + + L F+Y QR K ELEC K
Sbjct: 1 MNEQNKKA---LCVMSGGMDSTLSAYMMKNSGYEIIALHFNYNQRTQKKELECF----HK 53
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFL 116
I E + + E +IL L I S+LT K++ + I + +P T+VP RN IFL
Sbjct: 54 ICEDL-----DVKEKYILDLDFFAQIGASALTDKSIEVPIGGIEEGVPVTYVPFRNGIFL 108
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMW 174
AA +A + G I IGV E D SGYPDCR I ++E +INLG E+++ + PL+
Sbjct: 109 SMAAAVAEKEGANVISIGVVEEDSSGYPDCRESYINSMEQSINLGTKDETNIEIKMPLVH 168
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
LKK + + + ++ N+ L + +CY DK C C +C LR G+
Sbjct: 169 LKKSQIVQKSLEL------NVPLSLTWSCY-KNEDK------ACGVCDSCRLRLNGF 212
>gi|74318220|ref|YP_315960.1| ExsB ATPase [Thiobacillus denitrificans ATCC 25259]
gi|110816275|sp|Q3SGT8|QUEC_THIDA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|74057715|gb|AAZ98155.1| ExsB ATPase [Thiobacillus denitrificans ATCC 25259]
Length = 224
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+T L+ A + LS DYGQR+ EL + ++ +
Sbjct: 3 PCAIVLLSGGLDSATALAMAREAGFACHALSLDYGQRHTAELAAAARLAAQLGAV----- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYR 125
E ++ L LGD S+LT + ++ + ++ +P T+VP RN + L A A
Sbjct: 58 ----EHRVIRLG-LGDFGGSALT-DASIAVPESPVAGIPVTYVPARNTVMLALALAWAEV 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYET 180
LG +I IGV DYSGYPDCR + I A E NL ++ V +H PL L K E
Sbjct: 112 LGARDIFIGVNAVDYSGYPDCRPEFIEAFERMANLATKAGVEGAQLRIHAPLQHLSKAEI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + ++ +CY + R C C AC LR++G++
Sbjct: 172 IHRGTALG------VDYAQTVSCYQADAEGR-----ACGRCDACRLRREGFL 212
>gi|226228043|ref|YP_002762149.1| queuosine biosynthesis protein QueC [Gemmatimonas aurantiaca T-27]
gi|226091234|dbj|BAH39679.1| queuosine biosynthesis protein QueC [Gemmatimonas aurantiaca T-27]
Length = 238
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 113/246 (45%), Gaps = 35/246 (14%)
Query: 2 NDIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
+D AP A++L SGG DS+T L+ A ++F YGQR+ E+E V
Sbjct: 3 SDPHSPAPERPAVVLLSGGLDSATALAVARRDGFTPYAMTFRYGQRHAGEIEAARRVAAA 62
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM-KIQD-----NNLPNTFVPGRNI 113
H++ L S+LT +V + K +D + +P T+VP RN
Sbjct: 63 QQAAR----------HVVVDIDLRQWGGSALTSDVEVPKDRDVDEVTDEIPVTYVPARNT 112
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------T 167
IFL FA A LG I IGV DYSGYPDCR + + A ET NL + V T
Sbjct: 113 IFLSFALAWAETLGADAIFIGVNALDYSGYPDCRPEYVAAFETMANLATRAGVEGTQRLT 172
Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+H PL L K + L + +G V+ L S CY D G C C AC LR
Sbjct: 173 IHAPLQHLTKAQIVTLGRSLG----VDYSLTTS--CYDPAPD-----GTACGHCDACQLR 221
Query: 228 QKGWME 233
+G+ E
Sbjct: 222 LRGFAE 227
>gi|15606187|ref|NP_213564.1| trans-regulatory protein ExsB [Aquifex aeolicus VF5]
gi|81343542|sp|O67003|QUEC_AQUAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|2983380|gb|AAC06966.1| trans-regulatory protein ExsB [Aquifex aeolicus VF5]
Length = 218
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 116/237 (48%), Gaps = 35/237 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+KK ++L SGG DS+T L A F +V +SFDYGQR+KVEL+ K++ +L
Sbjct: 1 MKKHDGIIVLLSGGMDSATLLWLAKREFKKVYAISFDYGQRHKVELK----YAKELAKL- 55
Query: 65 PKWKDSLGEDH-ILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFA 119
+ EDH I+ + + S+L + +N P T VP RN+IFL A
Sbjct: 56 -----AEVEDHFIVQVPFYTSLKGSALIDESVEVPKGEYPENEPPVTTVPMRNLIFLSIA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLM 173
+ A L + I IGV D + YPDCR + I A E AIN G + + V+ P +
Sbjct: 111 SAFADNLEVNYIGIGVHALD-TPYPDCRPEFITAAEAAINAGSTFVAKKKERMHVYAPFL 169
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ K + L +++G + E++++CY+G C CP C R++
Sbjct: 170 GMSKRDIALLGKELG------VPFEKTYSCYMGTEPP-------CGECPTCIQREEA 213
>gi|149194505|ref|ZP_01871601.1| ExsB [Caminibacter mediatlanticus TB-2]
gi|149135249|gb|EDM23729.1| ExsB [Caminibacter mediatlanticus TB-2]
Length = 221
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 112/226 (49%), Gaps = 26/226 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++ SGG DS+T A + L F+YGQR + + L I + +
Sbjct: 4 AVVILSGGMDSTTATFIAKKEGYEIIPLHFNYGQRTE---KRELKAFNDICDYL-----E 55
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L +++ + I S+L +N+ + +P T+VP RN IFL A +A + G
Sbjct: 56 LKNRYVIDIPFFKQIGASALVDENIEVPTDGIKPGIPITYVPFRNGIFLSIATAVAEKEG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQ 185
I IGV E D SGYPDCR + I++IE AIN G ++ + + TPL+ LKK + K A
Sbjct: 116 AEAIYIGVVEEDSSGYPDCREEFIKSIEDAINKGTKPQTQIKIKTPLIHLKKEDIVKKAV 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G + LE + +CY E C C +C LR KG+
Sbjct: 176 EVG------VPLELTWSCY-------KEEDKACGVCDSCRLRLKGF 208
>gi|308273460|emb|CBX30062.1| Queuosine biosynthesis protein queC [uncultured Desulfobacterium
sp.]
Length = 230
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 118/235 (50%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A + ++SF YGQR+ EL KK+ E+ K
Sbjct: 5 AIVLLSGGLDSTTVMAIAKHEGFDLYSMSFFYGQRHSHELN----AAKKVSEVFNVKK-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNV------AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
H++ L I S+LT ++ ++ + +P T+VP RN IFL A A
Sbjct: 59 ----HLVINIDLNKIGGSALTADIKVPKARSLNSINKGIPVTYVPARNTIFLAHALAWAE 114
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKY 178
+ +I IGV D+SGYPDCR + I A E NL ++ V + TPL+ + K
Sbjct: 115 VIKSFDIFIGVNAIDFSGYPDCRPEFISAFEYMANLATKAGVEGKMRLKIRTPLINMTKA 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ K ++G V+ L +H+CY D G C+ C +C+LR+KG+ E
Sbjct: 175 QIIKKGIELG----VDYSL--THSCYDPGPD-----GSACSLCDSCFLRKKGFEE 218
>gi|87123416|ref|ZP_01079267.1| ExsB [Synechococcus sp. RS9917]
gi|86169136|gb|EAQ70392.1| ExsB [Synechococcus sp. RS9917]
Length = 226
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 20/222 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ L SGG DS+T + A++ RV LSFDYGQR++ ELE + +
Sbjct: 6 AIALLSGGLDSATAAALAIEAGQRVIGLSFDYGQRHRRELEAARHLANSL---------G 56
Query: 71 LGEDHILP--LAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L E H L LA G S + + + ++ +Q +P+T+VPGRN +F+ +LA G
Sbjct: 57 LEEHHTLAVNLASWGGSSLTDRRQELPIEGVQQGVIPSTYVPGRNTVFIAIGLSLAETRG 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V+GV DYSGYPDCR D + A +T NL + + P +W E W + +
Sbjct: 117 ADQLVLGVNAVDYSGYPDCRPDYLAAFQTLANLSSRAGLEGRGPRLWAPLVE-WSKQRIV 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ + +E++ +CY G C C +C +R +
Sbjct: 176 EEALRLGVPIEQTWSCYSGG-------AVACGVCDSCRIRDE 210
>gi|153006757|ref|YP_001381082.1| exsB protein [Anaeromyxobacter sp. Fw109-5]
gi|189038891|sp|A7HHA2|QUEC_ANADF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|152030330|gb|ABS28098.1| exsB protein [Anaeromyxobacter sp. Fw109-5]
Length = 233
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 111/236 (47%), Gaps = 36/236 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+TCL+ A LS DYGQR+K EL R + + +
Sbjct: 9 AVVLLSGGLDSTTCLAVARRDGFEAHCLSVDYGQRHKGEL-----ARAR------RLSRA 57
Query: 71 LGE-DHILPLAILGDISHSSLT-------KNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
LG DH + L S+LT K + + + +P T+VP RN + L A
Sbjct: 58 LGAADHRVVKVDLSAFGGSALTDRAIAVPKGRSGRRRAAEIPVTYVPARNTVLLALALAH 117
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGMESH-VTVHTPLMWLKK 177
A LG ++ +GV DYSGYPDCR +RA E A G+E + +H PL+ L K
Sbjct: 118 AETLGAEDVYVGVNAIDYSGYPDCRPAFLRAFERLATVATKAGVEGRPLRIHAPLLRLTK 177
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +G V L +CY R G C +C AC LR+KG+ E
Sbjct: 178 AGIVRLGTSLGVPYRVTL------SCYDPVR------GRACGACDACVLRRKGFAE 221
>gi|89094846|ref|ZP_01167779.1| ExsB [Oceanospirillum sp. MED92]
gi|89080901|gb|EAR60140.1| ExsB [Oceanospirillum sp. MED92]
Length = 227
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 114/244 (46%), Gaps = 40/244 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A DR LSFDYGQR+ EL + K++
Sbjct: 9 AVVLLSGGLDSATALAMAADRGYDCYVLSFDYGQRSLTELNAAKEIAKQLN--------- 59
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+H + L D S+LT + + + +++P T+VP RN +FL A A L
Sbjct: 60 -AREHRVIRLHLEDFGGSALTDHSIDVPEEETDDIPVTYVPARNTVFLSLALGWAEVLEA 118
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK----YE 179
+I IGV DYSGYPDCR + I A ET NL + V + TPL+ L K E
Sbjct: 119 DSIFIGVNAVDYSGYPDCRPEYIAAFETMANLATKRGVNGDPIKIETPLIDLTKEAIIQE 178
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFK 235
+L D G + +CY + G C +C +C LR G+ +E
Sbjct: 179 GTRLGVDYG----------LTVSCYQAD-----DSGRACGNCDSCRLRALGFTDAGLEDP 223
Query: 236 EKYQ 239
+YQ
Sbjct: 224 TRYQ 227
>gi|254166659|ref|ZP_04873513.1| exsB protein [Aciduliprofundum boonei T469]
gi|254167513|ref|ZP_04874365.1| exsB protein [Aciduliprofundum boonei T469]
gi|289596334|ref|YP_003483030.1| exsB protein [Aciduliprofundum boonei T469]
gi|197623776|gb|EDY36339.1| exsB protein [Aciduliprofundum boonei T469]
gi|197624269|gb|EDY36830.1| exsB protein [Aciduliprofundum boonei T469]
gi|289534121|gb|ADD08468.1| exsB protein [Aciduliprofundum boonei T469]
Length = 237
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 111/233 (47%), Gaps = 34/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L+ AL+ V LSFDYGQR+ ELE KKI
Sbjct: 3 AVVLLSGGLDSSTVLAIALEMGYDVHALSFDYGQRHSRELESA----KKIARY------- 51
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM---KIQD--NNLPNTFVPGRNIIFLVFAATLAYR 125
H + L I S+LT N+ + +++D +P T+VP RN I L A A
Sbjct: 52 FNVPHKIIKIDLRQIGGSALTDNIEVPERQVEDIEKEIPITYVPARNTILLSLALGYAEV 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
+ I G DYSGYPDCR + + A E NLG + V + P++ + K E
Sbjct: 112 IDADAIFYGANAIDYSGYPDCRPEYVEAFERVANLGTKRGVEGKPIKIIAPIIHMTKAEI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K ++G + E + +CY G++ C C +C LR KG+ME
Sbjct: 172 IKKGMELG------VPYELTWSCYRGEKK-------ACGKCDSCLLRLKGFME 211
>gi|295695131|ref|YP_003588369.1| exsB protein [Bacillus tusciae DSM 2912]
gi|295410733|gb|ADG05225.1| exsB protein [Bacillus tusciae DSM 2912]
Length = 240
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 37/240 (15%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
+A A+++ SGG DS+TC++ A + ++F YGQ++ VELE R+ R
Sbjct: 4 RALRAVVILSGGLDSTTCMAIADHEGYELYPITFSYGQKHAVELESAKQVAAHYRVGDRH 63
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
++V+L + S D S+ +++ +P+T+VPGRN +FL
Sbjct: 64 RVVDLGNFIRGSSLTD-----------PDQSIPVGRSLEEIGTGVPSTYVPGRNTVFLSL 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLM 173
A + A R+ I IGV DYSGYPDCR + ++A + I+ G + + + PL+
Sbjct: 113 ALSFAERIDAQAIFIGVNALDYSGYPDCRPEFLQAFQRVIDTGTVAGTEGAGIRLKAPLV 172
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K E + +G + +H+CY G C C +C +R +G+ E
Sbjct: 173 HLTKAEIIRRGSQLGAPYAL------THSCYQGTVPA-------CGVCDSCRIRIQGFRE 219
>gi|330877969|gb|EGH12118.1| exsB protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 221
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 28/234 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 8 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 67
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 68 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPITYVPARNTVFLSL 117
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 118 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 177
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
L K + K +G V+ L S CY + + G C C +C LR
Sbjct: 178 NLSKSDIVKAGAALG----VDYSLTVS--CY-----QADDQGRACGKCDSCRLR 220
>gi|218246824|ref|YP_002372195.1| exsB protein [Cyanothece sp. PCC 8801]
gi|218167302|gb|ACK66039.1| exsB protein [Cyanothece sp. PCC 8801]
Length = 225
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 113/236 (47%), Gaps = 40/236 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK-------IVEL 63
A++L SGG DS+T + AL + + LS YGQR++ EL + K IVE+
Sbjct: 7 AVVLLSGGLDSATSAAIALSQGYHLIALSLRYGQRHEKELAAAKNIAKALDITEHYIVEV 66
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +W S D L L G I N +P+T+VPGRN +F+ A +L
Sbjct: 67 NLAQWGGSALTDTALTLPQGG--------------INPNIIPSTYVPGRNTVFIAIALSL 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVT-VHTPLMWLKK 177
A G T I +G+ DYSGYPDCR D ++A + NL G+E H + PL+ K
Sbjct: 113 AEAKGATAIFLGINAVDYSGYPDCRPDYLQAYQRLANLSSKAGIEGHAPQLIAPLINDSK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + A +G + +E++ +CY G C C +C +R + +E
Sbjct: 173 VDIVRRAVSLG------VPIEDTWSCYQGGEKP-------CGLCDSCRIRDRALIE 215
>gi|145588460|ref|YP_001155057.1| exsB protein [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|189038942|sp|A4SVH9|QUEC_POLSQ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|145046866|gb|ABP33493.1| preQ(0) biosynthesis protein QueC [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 246
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 112/241 (46%), Gaps = 34/241 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A++LFSGG DS+T L+ A D LS YGQR+ EL + K+I
Sbjct: 15 KDGAPAVILFSGGLDSTTVLALAKDLGYTPYALSVGYGQRHSSELAAAKHIAKQI----- 69
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT-KNVAMKI---QDNNLPNTFVPGRNIIFLVFAAT 121
+ ++ L L S+LT ++A+ +D +P T+VP RN I L A
Sbjct: 70 ----GVARHEVVNLD-LTRFGGSALTDSSIAVPTTPGKDQEIPVTYVPARNTILLSLALG 124
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---------VHTPL 172
A LG ++ G DYSGYPDCR + + + ET NL ++ V VH P+
Sbjct: 125 WAESLGGLDVFYGANSVDYSGYPDCRPEYVASFETMANLATKAGVEAINNENRFRVHAPI 184
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K E +L +G + ++ +CY + + G C C +C LRQ G+
Sbjct: 185 ISLTKAEIIQLGSTLG------VDYSQTVSCY-----QANDLGEACGECESCRLRQIGFK 233
Query: 233 E 233
+
Sbjct: 234 Q 234
>gi|85375614|ref|YP_459676.1| exsB protein [Erythrobacter litoralis HTCC2594]
gi|122543216|sp|Q2N612|QUEC_ERYLH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|84788697|gb|ABC64879.1| exsB protein [Erythrobacter litoralis HTCC2594]
Length = 239
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 109/234 (46%), Gaps = 33/234 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A +L SGG DS + A ++ V L+ DYGQR+KVEL+ + KI
Sbjct: 8 AAAILLSGGLDSMVTAAIAQEQGYAVHALTIDYGQRHKVELQSARLIAAKIG-------- 59
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E H+ A L + S+LT ++ + N++P T+VP RN++FL A G
Sbjct: 60 --AERHVEIEADLRALGGSALTDDIDVPKCGVGNDIPVTYVPARNLVFLSLTTAFAEASG 117
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETW 181
+I IGV DYSGYPDCR + I + NL ++ V +H PL + K +
Sbjct: 118 ARDIFIGVNALDYSGYPDCRPEFIESFAVTANLATKAGVEESAPFKIHAPLQHMTKADIA 177
Query: 182 KLAQDIGGQDLVNLILEE--SHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + L LE S +CY C +C +C LR+KG+ E
Sbjct: 178 R--------ECARLGLESAWSWSCY-----DPLPGLKPCGACDSCRLRRKGFAE 218
>gi|225851495|ref|YP_002731729.1| ExsB protein [Persephonella marina EX-H1]
gi|254764364|sp|C0QST3|QUEC_PERMH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|225645380|gb|ACO03566.1| ExsB protein [Persephonella marina EX-H1]
Length = 227
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 32/236 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K++ S ++L SGG DS+ L A FD+V +SFDYGQ+++VEL+ KK+ E
Sbjct: 1 MKQSSSIIILVSGGMDSAALLWLAKKEFDKVYAVSFDYGQKHRVELD----FAKKLTE-- 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD--NNLPNTFVPGRNIIFLVFAAT 121
+ + E I + L I S+LT ++V + ++ P T VP RN+ FL AA+
Sbjct: 55 ---EAGVEEHFIAEVPHLKGIKGSALTDRSVEIPSEEYPEGPPVTTVPMRNLNFLSIAAS 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWL 175
A I NI IGV D S YPDCR + + A E AIN ++ +TV+TP + +
Sbjct: 112 FADIYEIENIGIGVHSVD-SPYPDCRAEFVSAAEAAINASSVMVAKKKNRITVYTPFLGM 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + ++ ++G + E++++CY G C C C R + +
Sbjct: 171 TKTDVLRIGLELG------VPYEKTYSCYRGTIPP-------CGECATCRQRIEAF 213
>gi|317968278|ref|ZP_07969668.1| PP-loop superfamily ATPase [Synechococcus sp. CB0205]
Length = 233
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 111/228 (48%), Gaps = 20/228 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P+A+ L SGG DS+T + A RV LSFDYGQR++ EL+ V + +
Sbjct: 14 PTAIALLSGGLDSATAAALAQAEGYRVIGLSFDYGQRHRRELQAAAAVAQTL-------- 65
Query: 69 DSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L E + LA G + + +V + +Q+ +P+T+VPGRN +F+ +LA
Sbjct: 66 -GLAEHQSIHVNLAAWGGSALTDTAMDVPNEGVQEGVIPSTYVPGRNTVFIAIGLSLAEA 124
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G +V+GV DYSGYPDCR D + A +T +L ++ H +W E W +
Sbjct: 125 RGAERLVLGVNAVDYSGYPDCRPDYLGAFQTLADLASKAGREGHGTQLWAPLVE-WSKTK 183
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + ++++ +CY G C C +C +R +E
Sbjct: 184 IVEEALRLGVPIDQTWSCYSGGEQP-------CGVCDSCRIRDAALIE 224
>gi|118474384|ref|YP_891314.1| ExsB protein [Campylobacter fetus subsp. fetus 82-40]
gi|261886302|ref|ZP_06010341.1| ExsB protein [Campylobacter fetus subsp. venerealis str. Azul-94]
gi|189038902|sp|A0RM81|QUEC_CAMFF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118413610|gb|ABK82030.1| ExsB protein [Campylobacter fetus subsp. fetus 82-40]
Length = 223
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 111/231 (48%), Gaps = 29/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--NKVELECRLCVRKKIVELMPKWK 68
A+ + SGG DS+ A + + L FDY QR NK E EC + +
Sbjct: 7 AVCVISGGMDSALAAYKAKNSGYEIVALHFDYNQRTMNK-ERECFNLICDDL-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + IL + + I ++LT N+ N+P T+VP RN IFL AA LA +
Sbjct: 58 -DVEKRFILDVGFIAQIGGNALTDKTLNIPKDGISENIPITYVPFRNGIFLSIAAALAQK 116
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWKLA 184
G I IGV E D SGYPDC I +I AINLG ++++ + TPL+ L K + K A
Sbjct: 117 EGCEAIYIGVVEEDSSGYPDCTEQFINSINKAINLGTADNNIVIKTPLVHLSKGDIVKEA 176
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + LE + +CY + C +C +C LR KG+ E K
Sbjct: 177 SSL------KVPLELTWSCYENSE-------FACGTCDSCRLRLKGFKEAK 214
>gi|213419651|ref|ZP_03352717.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 159
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 86/141 (60%), Gaps = 15/141 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
LL + ++TCL+ A ++D V ++FDYGQR++ E++ + K+ K
Sbjct: 29 LLYLVEVRTTTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARAHK----- 83
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL AA AY++
Sbjct: 84 ----VLDVTLLNELAVSSLTRD-SIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQV 138
Query: 127 GITNIVIGVCETDYSGYPDCR 147
++ GVCETD+SGYPDCR
Sbjct: 139 KAEAVITGVCETDFSGYPDCR 159
>gi|254490174|ref|ZP_05103365.1| exsB protein [Methylophaga thiooxidans DMS010]
gi|224464660|gb|EEF80918.1| exsB protein [Methylophaga thiooxydans DMS010]
Length = 223
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 111/229 (48%), Gaps = 30/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + T+SFDYGQR++ ELE + K S
Sbjct: 4 AVILLSGGLDSATVLAIAKSQGYDCYTISFDYGQRHRAELEASARLSK-----------S 52
Query: 71 LGE-DHILPLAILGDISHSSLT-KNVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG +H + L I S+LT ++ + Q + +P T+VP RN +F+ A A L
Sbjct: 53 LGATEHKVINIDLTAIGGSALTDSSIDVPSQHEEGIPITYVPARNTVFMSIALGWAEVLN 112
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
I +GV DYSGYPDCR D I A E NL ++ V T+ TPL+ L K +
Sbjct: 113 AQAIFVGVNAVDYSGYPDCRPDYIAAFEKMANLATKTGVEGLKLTIETPLIDLTKQAIIE 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++ +CY R C C +C R++G+
Sbjct: 173 KGIALG------VDYGQTVSCYQADNQGR-----ACGQCDSCRFRKQGF 210
>gi|302036609|ref|YP_003796931.1| queuosine biosynthesis protein queC [Candidatus Nitrospira
defluvii]
gi|300604673|emb|CBK41005.1| Queuosine biosynthesis protein QueC [Candidatus Nitrospira
defluvii]
Length = 232
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 109/234 (46%), Gaps = 32/234 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+ + A R+ L+ YGQR+ VE+E R + V
Sbjct: 6 PKAVILLSGGLDSTVTAAIAKQDGYRLYCLTISYGQRHHVEVE-----RARAVAQALSAA 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM---KIQDN---NLPNTFVPGRNIIFLVFAATL 122
H++ L S+LT +V + + Q++ +P T+VP RN IFL A
Sbjct: 61 A-----HVVVDVDLRAFGGSALTDDVTVPKDRTQEDRAGGIPVTYVPARNTIFLSLALAY 115
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKK 177
A L I G DYSGYPDCR D I A ET L GME V V PL+ L K
Sbjct: 116 AETLEAQRIYFGANVLDYSGYPDCRPDFIHAFETVARLGTKIGMEGRSVEVCAPLLMLSK 175
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + Q++ LE +H+CY D G C C +C +R++G+
Sbjct: 176 AEIVQRGQEL------RAPLELTHSCYDPGAD-----GVACGRCDSCRIRREGF 218
>gi|115373156|ref|ZP_01460458.1| ExsB protein [Stigmatella aurantiaca DW4/3-1]
gi|310824375|ref|YP_003956733.1| queuosine biosynthesis protein [Stigmatella aurantiaca DW4/3-1]
gi|115369912|gb|EAU68845.1| ExsB protein [Stigmatella aurantiaca DW4/3-1]
gi|309397447|gb|ADO74906.1| Queuosine biosynthesis protein [Stigmatella aurantiaca DW4/3-1]
Length = 229
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 121/235 (51%), Gaps = 34/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+TCL+ A D F+ V L+ YGQR+ VELE +++ E M
Sbjct: 4 AVVLLSGGLDSTTCLAMAKADGFEPV-CLAIHYGQRHAVELE----RARQVAETMGAR-- 56
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLVFAATLA 123
+ I+PL + G I S+LT ++ + + +P T+VP RN++FL A LA
Sbjct: 57 ---DFRIVPLDLRG-IGGSALTADIEVPKDRPETEMSHGIPVTYVPARNLLFLSLALGLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKY 178
+G +I IGV DYSGYPDCR I A + L ++ V VH PL + K
Sbjct: 113 EVVGAHDIYIGVNAVDYSGYPDCRPQFIEAFASVATLATKAGVEGQRFQVHAPLSGMTKA 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + +G V+ L +H+CY D + G C C +C LR+KG+ E
Sbjct: 173 QIIREGTRLG----VDYGL--THSCY--DPDAK---GRACGHCDSCVLRKKGFQE 216
>gi|330811383|ref|YP_004355845.1| transcription factor, ExsB family [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379491|gb|AEA70841.1| Putative transcription factor, ExsB family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 230
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 110/228 (48%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A R T+SFDYGQR++ EL V + +
Sbjct: 12 AVILLSGGLDSATVVAMARAEGYRCYTMSFDYGQRHRAELHAAERVARDL---------G 62
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A LG
Sbjct: 63 VVEHKVIGLNLNG-IGGSALTDSSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLGA 121
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL L K + K
Sbjct: 122 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRILAPLQNLSKADIVKA 181
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY + + G C C +C LR +G+
Sbjct: 182 GVKLG----VDYGLTVS--CY-----QADDQGRACGKCDSCRLRAEGF 218
>gi|307721058|ref|YP_003892198.1| preQ(0) biosynthesis protein QueC [Sulfurimonas autotrophica DSM
16294]
gi|306979151|gb|ADN09186.1| preQ(0) biosynthesis protein QueC [Sulfurimonas autotrophica DSM
16294]
Length = 227
Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 116/234 (49%), Gaps = 32/234 (13%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELEC--RLCVRKKIVE 62
K A+ + SGG DS+ + + + F+Y QR + ELEC +C +
Sbjct: 6 KTNKKAVCIMSGGMDSTLSAYMMQNEGYEIIAVHFNYDQRTQTKELECFENICASLHV-- 63
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFA 119
+ +IL L + S+LT K + + Q + +P T+VP RN IFL A
Sbjct: 64 ---------KQKYILDLDFFKQLGASALTDKTIEVPTQGIEEGVPVTYVPFRNGIFLSMA 114
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKK 177
A +A + I IGV E D SGYPDCR + I+A++ AINLG E+++ + PL+ LKK
Sbjct: 115 AAIAEKESAQIISIGVVEEDSSGYPDCREEYIKAMQNAINLGTKEETNIEIKMPLVHLKK 174
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + A + N+ LE + +CY K +K+ C C +C LR G+
Sbjct: 175 SQIVQEALKL------NVPLELTWSCY--KNEKK-----ACGICDSCRLRLNGF 215
>gi|119504268|ref|ZP_01626348.1| ExsB protein [marine gamma proteobacterium HTCC2080]
gi|119459776|gb|EAW40871.1| ExsB protein [marine gamma proteobacterium HTCC2080]
Length = 221
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LSFDYGQR++ EL V ++ K
Sbjct: 3 AVVLTSGGLDSATVLAMAHAAGRQCYALSFDYGQRHRAELSAAARVAASFEGIIHK---- 58
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ L + G I S+LT + + + ++ +P T+VP RN +FL A A +G
Sbjct: 59 -----TVSLDLRG-IGGSALTDDAIDVPVEPTEGIPVTYVPARNTVFLSIALGWAEVIGA 112
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAI----ETAINLGMESH-VTVHTPLMWLKKYETWKL 183
+ I IGV DYSGYPDCR + I A A G+E + + TP++ L K E
Sbjct: 113 SEIYIGVNAVDYSGYPDCRPEFIDAFGALAAVATKAGVEGDPIKICTPIIDLTKAEIIAR 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
D+G + E++ +CY + + G C C +C LR +G+ E
Sbjct: 173 GMDLG------VDYEQTVSCY-----QASDEGKACGRCDSCRLRAQGFFE 211
>gi|257059865|ref|YP_003137753.1| exsB protein [Cyanothece sp. PCC 8802]
gi|256590031|gb|ACV00918.1| exsB protein [Cyanothece sp. PCC 8802]
Length = 225
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 113/236 (47%), Gaps = 40/236 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK-------IVEL 63
A++L SGG DS+T + AL + + LS YGQR++ EL + K IVE+
Sbjct: 7 AVVLLSGGLDSATSAAIALSQGYHLIALSLRYGQRHEKELAAAKNIAKALDITEHYIVEV 66
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +W S D L L G I N +P+T+VPGRN +F+ A +L
Sbjct: 67 NLAQWGGSALTDTALTLPQAG--------------INPNIIPSTYVPGRNTVFIAIALSL 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVT-VHTPLMWLKK 177
A G T I +G+ DYSGYPDCR D ++A + NL G+E H + PL+ K
Sbjct: 113 AEAKGATAIFLGINAVDYSGYPDCRPDYLQAYQRLANLSSKAGIEGHAPQLIAPLINDSK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + A +G + +E++ +CY G C C +C +R + ++
Sbjct: 173 VDIVRRAFSLG------VPIEDTWSCYQGGEKP-------CGLCDSCRIRDRALID 215
>gi|288818468|ref|YP_003432816.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|288787868|dbj|BAI69615.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|308752058|gb|ADO45541.1| exsB protein [Hydrogenobacter thermophilus TK-6]
Length = 214
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 45/237 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
S L+L SGG DS+T L + FD++ +SFDYGQR++VE+ K+
Sbjct: 3 SVLVLLSGGMDSATLLWLSKKEFDKIYAISFDYGQRHRVEI---------------KYAK 47
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN----------TFVPGRNIIFLVFA 119
L + + + ++ H S+ K A+ Q+ ++P T VP RN+ F+ A
Sbjct: 48 DLAKMAQVEEHFIVEVPHYSVLKGSALLDQEASIPKGEYPQEEPPITTVPMRNLTFISIA 107
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLM 173
A+ A L I +I IGV D S YPDCR + I + E A+N + + ++ P +
Sbjct: 108 ASFADTLEIDHIGIGVHALD-SPYPDCRPEFITSAEAAVNASSIFVAKTKKRIHIYAPFL 166
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ K + + +D+G + E++++CY+G C C AC R++
Sbjct: 167 GMSKRDIALIGRDLG------VPFEKTYSCYVGTEPP-------CGECAACLQRKQA 210
>gi|296284927|ref|ZP_06862925.1| exsB protein [Citromicrobium bathyomarinum JL354]
Length = 231
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A L SGG DS + A +R V L+ DYGQR+ E+E +KI + +
Sbjct: 10 AAALLSGGLDSMVAAALARERGHEVHALTIDYGQRHVREIE----AARKIAKAL-----G 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + L L S+LT ++ + D +P T+VP RN++FL A +G
Sbjct: 61 LASHREITLD-LRKFGGSALTADIDVPKDGVDGTIPVTYVPARNLVFLALTTAFAESIGA 119
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
IVIGV DYSGYPDCR + I + LG ++ + + PL +L K E
Sbjct: 120 GRIVIGVNALDYSGYPDCRPEFIASFAETARLGTKAGIEGGGFAIDAPLQFLGKAEIASE 179
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
A +G L S +CY D R + G C C +C LR+KG+ +
Sbjct: 180 ANRLG------LDTALSWSCY----DPRGD-GLPCGLCDSCRLRRKGFAD 218
>gi|222823734|ref|YP_002575308.1| ExsB family transcriptional regulator [Campylobacter lari RM2100]
gi|222538956|gb|ACM64057.1| transcriptional regulator, ExsB family [Campylobacter lari RM2100]
Length = 221
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 113/229 (49%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL + SGG DS+ C A + L FDY QR L+ R C K +L K K
Sbjct: 4 ALCIISGGMDSTLCAYLAKKEGYEIIALHFDYNQRTM--LKERECFNKICEKLNIKTK-- 59
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+IL ++ + +I +SLT N+ + K+ + +PNT+VP RN IFL A +A +
Sbjct: 60 ----YILDVSFIANIGGNSLTDLNLEIPKEKLHEKEVPNTYVPFRNGIFLSIAGAIAEKE 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLA 184
+I IGV + D SGYPDC + I+ IN G +V + TPL+ L K + +LA
Sbjct: 116 KCESIFIGVVQEDSSGYPDCSANFIQKASEFINEGTTKTCNVAIKTPLVHLSKGQIVELA 175
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ LE + +CY + DK C C +C LR KG+ E
Sbjct: 176 LK------EKVALECTWSCY-EREDK------ACGKCDSCLLRLKGFKE 211
>gi|70732079|ref|YP_261835.1| exsB protein [Pseudomonas fluorescens Pf-5]
gi|110816202|sp|Q4K7E8|QUEC1_PSEF5 RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|68346378|gb|AAY93984.1| exsB protein [Pseudomonas fluorescens Pf-5]
Length = 233
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 110/228 (48%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A R T+SFDYGQR++ EL V + +
Sbjct: 15 AVILLSGGLDSATVVAMARAEGYRCYTMSFDYGQRHRAELHAAERVARDL---------G 65
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A L
Sbjct: 66 VVEHKVIGLNLNG-IGGSALTDSTIEVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLHA 124
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL L K E +
Sbjct: 125 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNLSKAEIIQA 184
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY + + G+ C C +C LR +G+
Sbjct: 185 GVRLG----VDYGLTVS--CY-----QADDSGHACGKCDSCRLRAEGF 221
>gi|281358519|ref|ZP_06244999.1| exsB protein [Victivallis vadensis ATCC BAA-548]
gi|281315001|gb|EFA99034.1| exsB protein [Victivallis vadensis ATCC BAA-548]
Length = 225
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 110/232 (47%), Gaps = 31/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A T+SFDYGQR++ ELE +I + K
Sbjct: 5 AVILLSGGLDSATVLAIAGSEGFDCYTMSFDYGQRHRCELE----AAGRIAAALGAVK-- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYRL 126
H L S+LT + A+ + D + +P T+VP RN+IFL FA A L
Sbjct: 59 ----HNTVKIDLRQWGGSALTDD-ALAVPDAEDSHGIPITYVPARNLIFLSFATAWAEVL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETW 181
G +I IGV DYSGYPDCR I + + LG + H +++ PL L K E
Sbjct: 114 GARDIFIGVNSVDYSGYPDCRPKFIESFQETARLGTCAVDEGWHYSINAPLQNLSKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G V+ L S CY + R C C +C LR G+ E
Sbjct: 174 RRGVALG----VDYGLTTS--CYNPDSEGR-----SCGKCASCSLRIAGFRE 214
>gi|119487253|ref|ZP_01621004.1| hypothetical protein L8106_21052 [Lyngbya sp. PCC 8106]
gi|119455808|gb|EAW36943.1| hypothetical protein L8106_21052 [Lyngbya sp. PCC 8106]
Length = 229
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 37/237 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-------ECRLCVRKKIVEL 63
A++L SGG DSST L A +SFDY QR++ EL + V ++V+
Sbjct: 3 AVILLSGGLDSSTVLYQAKAEGYECYAISFDYQQRHQRELASAQQIAQSAGVVEHQVVKF 62
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ W S D + L + ++ N+P T+VP RN IFL FA
Sbjct: 63 DLSLWGGSALTDRKI-----------DLPNDRSLNQMSENIPITYVPARNTIFLSFALGY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
A + + + IGV DYSGYPDCR D I A++ LG + + + +H+PL+ LKK
Sbjct: 112 AETVNASRVYIGVNALDYSGYPDCRPDYIAAMQDVFRLGTKQGREGNPILIHSPLIHLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
E +L + + + E++ +CY G+ C C +C LR + E
Sbjct: 172 TEIIQLG------NRLRVPWEKTWSCYAGEEKS-------CGVCDSCKLRLAAFKEL 215
>gi|67920157|ref|ZP_00513677.1| ExsB [Crocosphaera watsonii WH 8501]
gi|67857641|gb|EAM52880.1| ExsB [Crocosphaera watsonii WH 8501]
Length = 230
Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 115/230 (50%), Gaps = 24/230 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+T + A+D+ V LS +YGQR++ ELE K I E +
Sbjct: 5 PIAVVLLSGGLDSATSAAIAIDQGYEVIALSLEYGQRHQRELEAA----KTIAEAL---- 56
Query: 69 DSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ + +I+ + I G S + N +P+T+VPGRN +F+ A +L
Sbjct: 57 -NITQHYIIDVNIAQWGGSSLTDSSLSLPQGGVDPNEIPSTYVPGRNTVFIGLALSLGEA 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G T I +G+ DYSGYPDCR + ++A + NL ++ + P + K+
Sbjct: 116 KGATAIYLGINAVDYSGYPDCRPEYLQAYQNLANLSSKAGIEGKAPQLVAPLISKTKV-- 173
Query: 186 DIGGQDLVNLILEESHT--CYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
DI +D + L + S T CY G+++ C C +C +R + +E
Sbjct: 174 DI-VKDAIRLGVPISKTWSCYQGEQEP-------CGLCDSCRIRDRALIE 215
>gi|307293825|ref|ZP_07573669.1| exsB protein [Sphingobium chlorophenolicum L-1]
gi|306879976|gb|EFN11193.1| exsB protein [Sphingobium chlorophenolicum L-1]
Length = 230
Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 109/231 (47%), Gaps = 30/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS A + RV LS DY QR+++EL V + +
Sbjct: 9 AVVLLSGGLDSMVAGGLAREAGYRVLALSIDYNQRHRLELRAAGRVAAALNAI------- 61
Query: 71 LGEDHI-LPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLG 127
HI LPL + S+LT ++A+ +P T+VP RN IFL LA G
Sbjct: 62 ---SHIVLPLDLTA-FGGSALTADIAVPKGGVGPGIPVTYVPARNTIFLSLTLGLAEVAG 117
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLMWLKKYETWK 182
++ IGV DYSGYPDCR + I A + A G+E H + ++ PL + K + +
Sbjct: 118 ANDVFIGVNALDYSGYPDCRPEFIDAFQKMAALATKAGVEGHPIRINAPLQHMSKADIVR 177
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
A +G L S +CY D ++ C C +C LR KG+ME
Sbjct: 178 EAHRLG------LDAGLSWSCYDPTPDGKH-----CGQCDSCRLRSKGFME 217
>gi|300866059|ref|ZP_07110789.1| 7-cyano-7-deazaguanine synthase [Oscillatoria sp. PCC 6506]
gi|300335920|emb|CBN55947.1| 7-cyano-7-deazaguanine synthase [Oscillatoria sp. PCC 6506]
Length = 231
Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 109/237 (45%), Gaps = 37/237 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-------VRKKIVEL 63
A++L SGG DSST L A T+SFDY QR+ ELE V+ ++V
Sbjct: 3 AVVLLSGGLDSSTVLYQAQADGCESYTISFDYQQRHLRELESAKAIALSAGVVKHQVVSF 62
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ W S D+ + ++ + ++P T+VP RN IFL FA
Sbjct: 63 DLSLWGGSALTDNKI-----------DFPRDRTLAQMSESIPITYVPARNTIFLSFALAW 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
A L I IGV DYSGYPDCR D I+A++ LG + + +++ TPL+ LKK
Sbjct: 112 AETLNADRIYIGVNALDYSGYPDCRPDYIQAMQEVFRLGTKQGREGNPISILTPLIDLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
E KL +G + E++ +CY G C C +C LR + E
Sbjct: 172 TEIIKLGNHLG------VPWEKTWSCYAGGE-------LACGLCDSCRLRVAAFEEL 215
>gi|320530194|ref|ZP_08031264.1| ExsB protein [Selenomonas artemidis F0399]
gi|320137627|gb|EFW29539.1| ExsB protein [Selenomonas artemidis F0399]
Length = 228
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVE--LMPK 66
A++L SGG DS TC++ A + + +SF YGQR E++C R+ E ++
Sbjct: 5 AVILLSGGLDSCTCMAVAQEAGCELYPVSFVYGQRYDREVDCAKRIAAHFHAAEHLIIET 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D++G + +I D+ + ++P T+VP RN+IFL + A R+
Sbjct: 65 NMDAIGGSAVTDRSI--DVPEGDPDRT--------DIPLTYVPARNLIFLSYGLGFAERV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYET 180
G ++ IGV DYSGYPDCR + IR + ++ + V TPL +L K E
Sbjct: 115 GAAHLYIGVNSVDYSGYPDCRPEFIRQFQAVADMATAAATERGKRIVVETPLQYLSKGEI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L +G E + +CY G + C C +C LR +G+ E
Sbjct: 175 IALGTRLGAP------YEMTTSCYNGGTEA-------CGVCDSCRLRLRGFAE 214
>gi|253997440|ref|YP_003049504.1| exsB protein [Methylotenera mobilis JLW8]
gi|253984119|gb|ACT48977.1| exsB protein [Methylotenera mobilis JLW8]
Length = 226
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS+T L++A + LS DY QR+ EL+ K + ++M
Sbjct: 4 NAVVLLSGGLDSATVLAYARSQGFECYCLSLDYHQRHIAELQ----AAKNVAKVMGAAAH 59
Query: 70 SLGEDHILPLAILGDISHSSLTKN-VAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ L L++ G S+LT + +A+ + +P T+VP RN I L A A L
Sbjct: 60 KTAQ---LDLSLFGG---SALTDDAIAVPVSATEGIPITYVPARNTIMLSLALAWAEVLQ 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + ++A + NL +S V T+H PL+ + K +
Sbjct: 114 AQDIFIGVNALDYSGYPDCRGEYVKAFQDMANLATKSAVEGKTITIHAPLIDMTKAQIVT 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L ++G V+ + S CY + G C C +C LR+ G+
Sbjct: 174 LGTELG----VDYAMTVS--CYQADSE-----GEACGLCDSCRLRRDGFF 212
>gi|126657829|ref|ZP_01728982.1| ExsB [Cyanothece sp. CCY0110]
gi|126620769|gb|EAZ91485.1| ExsB [Cyanothece sp. CCY0110]
Length = 231
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 30/233 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+T + A+D+ V LS YGQR++ EL + + +
Sbjct: 5 PLAVVLLSGGLDSATSAAIAIDQGYEVIALSLRYGQRHQRELNAAQTIAQAL-------- 56
Query: 69 DSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ + +I+ + I G S + +P+T+VPGRN +F+ A +LA
Sbjct: 57 -NISKHYIIDVNIAQWGGSSLTDSSLSLPQSGVDTTVIPSTYVPGRNTVFIALALSLAEA 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHT-PLMWLKKYET 180
G I +G+ DYSGYPDCR D ++A +T NL G+E + T PL+ K +
Sbjct: 116 KGAQAIYLGINAVDYSGYPDCRPDYLQAYQTLANLSSKAGLEGKAPLLTAPLITKTKVDI 175
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K A +G + + ++ +CY GK + C C +C +R + +E
Sbjct: 176 IKDAIKLG------VPIAKTWSCYQGKPEP-------CGLCDSCRIRDRALIE 215
>gi|313894914|ref|ZP_07828474.1| protein ExsB [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976595|gb|EFR42050.1| protein ExsB [Selenomonas sp. oral taxon 137 str. F0430]
Length = 228
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 33/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS TC++ A + + +SF YGQR E++C K+I
Sbjct: 5 AVILLSGGLDSCTCMAVAQEAGCELYPVSFVYGQRYDREVDCA----KRIAAHFHAA--- 57
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRL 126
+H++ + I S++T +++ + D ++P T+VP RN+IFL + A R+
Sbjct: 58 ---EHLIIETNMDAIGGSAVTDRSIDVPEGDPDRTDIPLTYVPARNLIFLSYGLGFAERV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYET 180
G ++ IGV DYSGYPDCR + IR + A ++ + V TPL +L K E
Sbjct: 115 GAAHLYIGVNSVDYSGYPDCRPEFIRQFQAAADMATAAATERGKRIVVETPLQYLSKGEI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L +G E + +CY G + C C +C LR +G+ E
Sbjct: 175 IALGTRLGAP------YELTTSCYNGGTEA-------CGVCDSCRLRLRGFAE 214
>gi|88809457|ref|ZP_01124965.1| ExsB [Synechococcus sp. WH 7805]
gi|88786676|gb|EAR17835.1| ExsB [Synechococcus sp. WH 7805]
Length = 229
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + A RV LSFDYGQR++ EL+ K+I +
Sbjct: 8 TAIALLSGGLDSATAAALAKAAGCRVIGLSFDYGQRHRRELQ----AAKEIALAL----- 58
Query: 70 SLGEDHILP--LAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L E H + LA G S + T ++ +Q++ +P+T+VPGRN +F+ +LA
Sbjct: 59 NLLEHHTISVNLASWGGSSLTDTTLSLPTDGVQEDAIPSTYVPGRNTVFISIGLSLAEAR 118
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +V+G+ DYSGYPDCR D +RA +T NL + P +W E W +
Sbjct: 119 GAEQVVLGINAVDYSGYPDCRPDYLRAFQTLANLSSKVGREGRGPRLWAPLVE-WSKQRI 177
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ + + +E + +CY G C C +C +R
Sbjct: 178 VEEALRLGVPIESTWSCYSGG-------AVPCGRCDSCRIR 211
>gi|194366887|ref|YP_002029497.1| exsB protein [Stenotrophomonas maltophilia R551-3]
gi|254764386|sp|B4ST23|QUEC_STRM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194349691|gb|ACF52814.1| exsB protein [Stenotrophomonas maltophilia R551-3]
Length = 221
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V K + K D
Sbjct: 4 AVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELDAAARVAKAQGVIAHKTVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + + +P T+VP RN I L A A LG
Sbjct: 63 ---------VDLRSIGGSALTDDIDVPEAGGAGIPVTYVPARNTIMLSLALGWAEVLGAN 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKK----YET 180
+I GV DYSGYPDCR + + A + NL +S V VH PL +L K E
Sbjct: 114 DIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIKVHAPLQFLSKGQIVSEG 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L D G + +CY + G C+ C AC LR +G+ E
Sbjct: 174 VRLGVDFG----------LTVSCYNADAN-----GAACSHCDACRLRAQGFTE 211
>gi|319786289|ref|YP_004145764.1| exsB protein [Pseudoxanthomonas suwonensis 11-1]
gi|317464801|gb|ADV26533.1| exsB protein [Pseudoxanthomonas suwonensis 11-1]
Length = 224
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 106/228 (46%), Gaps = 29/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ L SGG DS+ L+ A ++ V LS YGQR+ EL+ + +
Sbjct: 4 AVALVSGGMDSAVVLAIAREQGFAVHALSVRYGQRHTSELDA-----------AARVASA 52
Query: 71 LGEDHILPLAI-LGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG +AI L I S+LT ++ + + +P T+VP RN I L A A LG
Sbjct: 53 LGAAAHKTVAIDLRSIGGSALTDDIEVPEAGGEGIPVTYVPARNTIMLSAALGWAEVLGA 112
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I GV DYSGYPDCR + I A E NL ++ V VH PL+ + K E +
Sbjct: 113 ADIFCGVNAVDYSGYPDCRPEFIEAFERLANLATKAGVEGAGIRVHAPLLHMGKDEIVRE 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++ +CY + + G C C AC LR G+
Sbjct: 173 GLRLG------VDFAQTVSCY-----RADDQGLACGHCDACQLRAAGF 209
>gi|291612994|ref|YP_003523151.1| exsB protein [Sideroxydans lithotrophicus ES-1]
gi|291583106|gb|ADE10764.1| exsB protein [Sideroxydans lithotrophicus ES-1]
Length = 225
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 110/230 (47%), Gaps = 32/230 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS DYGQR+ EL + S
Sbjct: 5 AVVLLSGGLDSATVLAMARTQGFECYALSVDYGQRHHAELAA-----------AQRVAQS 53
Query: 71 LG--EDHILPLAILGDISHSSLT-KNVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG E ++ + + G S+LT N+A+ Q + +P T+VP RN I L A A L
Sbjct: 54 LGAREQRVVNIDLTG-FGGSALTDANIAVPEQAGSGIPITYVPARNTIMLSLALAWAEVL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
+I GV DYSGYPDCR + + A E NL ++ V T+H PL+ L K E
Sbjct: 113 KAQDIFFGVNAVDYSGYPDCRPEYVAAFERMANLATQAAVEGKPLTLHAPLLHLSKAEII 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G V+ L S CY + G C C +C LR++G+
Sbjct: 173 RQGVRLG----VDYGLTVS--CYQAD-----DEGRACGRCDSCRLRREGF 211
>gi|91205311|ref|YP_537666.1| trans-regulatory protein ExsB [Rickettsia bellii RML369-C]
gi|157826917|ref|YP_001495981.1| trans-regulatory protein ExsB [Rickettsia bellii OSU 85-389]
gi|110816256|sp|Q1RJ87|QUEC_RICBR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016448|sp|A8GVR7|QUEC_RICB8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91068855|gb|ABE04577.1| Trans-regulatory protein ExsB [Rickettsia bellii RML369-C]
gi|157802221|gb|ABV78944.1| Trans-regulatory protein ExsB [Rickettsia bellii OSU 85-389]
Length = 225
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ ++ + +SF+YGQRN EL +K+ EL+ ++
Sbjct: 4 AVILVSGGADSATVLAIMREQGYEIHAISFNYGQRNNAEL-------RKVTELVKEYNVK 56
Query: 71 LGEDHILPLAILG---------DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + L G + H TK + ++P T+VP RN IFL +A
Sbjct: 57 QHKIVNIDLRAFGGSALTDDDIKVPHYHDTKELP-----EDVPVTYVPARNTIFLSYALG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWLKKYET 180
A +G +I IGV +D + YPDCR + I++ E NL VT+HTPL+ + K +
Sbjct: 112 FAEIIGAKDIFIGVHTSDSANYPDCRPEYIKSFEAMANLATNIGGVTIHTPLINMTKDQI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
K + G D N I +CY D C +C AC +R + K QD
Sbjct: 172 IKTGLRL-GVDYKNTI-----SCYDPSEDD-----LSCGTCLACTIRLDAFK--KNNVQD 218
>gi|332296388|ref|YP_004438311.1| exsB protein [Thermodesulfobium narugense DSM 14796]
gi|332179491|gb|AEE15180.1| exsB protein [Thermodesulfobium narugense DSM 14796]
Length = 216
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 27/222 (12%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
+FSGG DS+T L + L++ +V+T+SF YGQ++K ELEC + +K+ E
Sbjct: 6 IFSGGLDSTTLLYYLLNQGHKVKTISFFYGQKHKKELECSKNIARKLNI----------E 55
Query: 74 DHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ ++ L+ L DI SSLT ++ + D N+ +T VP RN+IFL A + A
Sbjct: 56 NKLIDLSALKDIFGKSSLTSDMDIPEGHYNDTNMKSTVVPNRNMIFLSIAISYAISSNFD 115
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ IGV D++ YPDCR I ++ + S + + P + LKKYE K+ ++
Sbjct: 116 AVSIGVHAGDHAIYPDCRPVFINKMKDVAKVSDYSEIGILAPFLDLKKYEIVKIGLEL-- 173
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + TCY G+ C C +C R + +
Sbjct: 174 ----KVPYEMTWTCYKGEEKP-------CLKCGSCTERLEAF 204
>gi|254521815|ref|ZP_05133870.1| exsB protein [Stenotrophomonas sp. SKA14]
gi|219719406|gb|EED37931.1| exsB protein [Stenotrophomonas sp. SKA14]
Length = 221
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V K + K D
Sbjct: 4 AVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELDAAARVAKAQRVVAHKTVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + + +P T+VP RN I L A A LG
Sbjct: 63 ---------VDLRSIGGSALTDDIDVPEAGGAGIPVTYVPARNTIMLSLALGWAEVLGAN 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKK----YET 180
+I GV DYSGYPDCR + + A + NL +S V VH PL +L K E
Sbjct: 114 DIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIQVHAPLQFLSKGQIVSEG 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L D G + +CY + G C C AC LR +G+ E
Sbjct: 174 VRLGVDFG----------LTVSCYNADAN-----GAACGHCDACRLRAQGFAE 211
>gi|289661975|ref|ZP_06483556.1| ExsB protein [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289667005|ref|ZP_06488080.1| ExsB protein [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 224
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 31/231 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ R+ + ++
Sbjct: 4 AVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAATRVAAAQGVIA------ 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H + L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 58 ------HKVVDVDLRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 112 ANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L S CY D R C C AC LR G+ +
Sbjct: 172 EGVRLG----VDFGLTVS--CYRADADGR-----ACGHCDACRLRAAGFAD 211
>gi|258593845|emb|CBE70186.1| Queuosine biosynthesis protein queC [NC10 bacterium 'Dutch
sediment']
Length = 233
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 116/235 (49%), Gaps = 35/235 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++L SGG DS+T + A + ++ L+F YGQR+ E VE + +L
Sbjct: 1 MVLLSGGIDSATAAALAKAKGYQLHALTFRYGQRHARE-----------VESATRIAAAL 49
Query: 72 GEDHILPLAI-LGDISHSSLTKNVA------MKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
G L L + L I S+LT + M + +P T+VP RN IFL +A A
Sbjct: 50 GASQHLILDLDLRRIGGSALTAEIPVPKGREMDEIGSGIPVTYVPARNTIFLSYALAWAE 109
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME--SHVTVHTPLMWLKKY 178
+G +IV+GV DYSGYPDCR + I A E NL G E S +T++TPL+ L K
Sbjct: 110 VIGSEDIVLGVNAIDYSGYPDCRPEYIAAFERMANLATRAGAEGRSTLTIYTPLIHLSKA 169
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E + +G + + +CY +D R C +C +C LR+KG+ E
Sbjct: 170 EIIRRGAALG------IDFRLTWSCYDPTQDGRP-----CRACDSCILREKGFAE 213
>gi|190575558|ref|YP_001973403.1| putative transcriptional regulator [Stenotrophomonas maltophilia
K279a]
gi|254764387|sp|B2FRM5|QUEC_STRMK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|190013480|emb|CAQ47115.1| putative transcriptional regulator [Stenotrophomonas maltophilia
K279a]
Length = 221
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V K + K D
Sbjct: 4 AVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELDAAARVAKAQGVVAHKIVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + + +P T+VP RN I L A A LG
Sbjct: 63 ---------VDLRSIGGSALTDDIDVPEAGGAGIPVTYVPARNTIMLSLALGWAEVLGAN 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKK----YET 180
+I GV DYSGYPDCR + + A + NL +S V VH PL +L K E
Sbjct: 114 DIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIKVHAPLQFLSKGQIVSEG 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L D G + +CY + G C C AC LR +G+ E
Sbjct: 174 VRLGVDFG----------LTVSCYNADAN-----GAACGHCDACRLRAQGFAE 211
>gi|157804083|ref|YP_001492632.1| trans-regulatory protein ExsB [Rickettsia canadensis str. McKiel]
gi|167016449|sp|A8EZR4|QUEC_RICCK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157785346|gb|ABV73847.1| Trans-regulatory protein ExsB [Rickettsia canadensis str. McKiel]
Length = 227
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 33/230 (14%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS+T L+ A + +SF+YGQRN EL +K+ EL+ ++ +
Sbjct: 7 LVSGGADSATVLAIAQKMGYEIYAMSFNYGQRNNAEL-------RKVRELVKEYN---VK 56
Query: 74 DHILPLAILGDISHSSLTKN---VAMKIQDNNLPN----TFVPGRNIIFLVFAATLAYRL 126
H + L S S+LT N V N LP+ T+VP RN IFL +A A +
Sbjct: 57 QHKIVNIDLRAFSGSALTDNNISVPHYHDVNELPDDVPVTYVPARNTIFLSYALGFAEVI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMES-HVTVHTPLMWLKKYETW 181
G +I IGV +D + YPDCR + I++ E A N+G++ +T+HTPL+ + K +
Sbjct: 117 GAKDIFIGVHTSDSANYPDCRPEYIKSFEEMANLATNMGVQGKKITIHTPLIDMTKEQII 176
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++ G D N I +CY D C +C AC +R +
Sbjct: 177 RTGLEL-GVDYKNTI-----SCYEPTEDD-----LSCGTCLACMIRLDAF 215
>gi|292670246|ref|ZP_06603672.1| transcription regulator ExsB [Selenomonas noxia ATCC 43541]
gi|292648198|gb|EFF66170.1| transcription regulator ExsB [Selenomonas noxia ATCC 43541]
Length = 232
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 110/230 (47%), Gaps = 32/230 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS TC++ A + +SFDY QR+ EL C +K V
Sbjct: 10 AVVLLSGGLDSCTCMAVADAAGHELYPVSFDYHQRHIRELSC---AKKIAVHYH------ 60
Query: 71 LGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+H++ + + S+LT + Q ++P T+VP RN+IFL +A A R+
Sbjct: 61 -AAEHLIIETNMNAVGGSALTDDTIDVPEGDAQRTDIPATYVPARNLIFLSYALGYAERV 119
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETW 181
G T++ IGV DYSGYPDCR I A + A + + + V TPL L K E
Sbjct: 120 GATHLYIGVNSVDYSGYPDCRPAFIAAFQAAADAATAAAERGRRIIVETPLQSLSKGEII 179
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+L +G E + +CY G+ + C C +C LR +G+
Sbjct: 180 RLGTKLGAP------YELTTSCYRGEEEA-------CGVCDSCVLRLRGF 216
>gi|254425193|ref|ZP_05038911.1| exsB protein [Synechococcus sp. PCC 7335]
gi|196192682|gb|EDX87646.1| exsB protein [Synechococcus sp. PCC 7335]
Length = 243
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 125/244 (51%), Gaps = 34/244 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K +P A++L SGG DS+TC + A+ D +D V LSF+YGQR+ EL L R+ + L
Sbjct: 1 MKPSPKAVVLLSGGLDSATCAAQAIADGYD-VIALSFNYGQRHDREL---LAARELVSAL 56
Query: 64 MPKWKDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVF 118
+ E I+ LA G S + T + + +D + +P+T+VPGRN +F+
Sbjct: 57 ------DITEHQIIDINLAQWGGSSLTDRTMVIPTEGKDLDAKVIPSTYVPGRNTVFIAI 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVT-VHTPLM 173
A +LA G I +G+ DYSGYPDCR D + A +T +L G+E+ + PL+
Sbjct: 111 ALSLAEASGAIAIYLGINAVDYSGYPDCRPDYLAAFQTLASLSSKAGLENRAPKLVAPLI 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + A ++G + +E++ +CY G+ C C +C +R ++
Sbjct: 171 SDSKVDIVHRALNLG------VPIEKTWSCYSGE-------DLPCGRCDSCRIRNDALVK 217
Query: 234 FKEK 237
+
Sbjct: 218 AGRR 221
>gi|118594348|ref|ZP_01551695.1| hypothetical protein MB2181_01730 [Methylophilales bacterium
HTCC2181]
gi|118440126|gb|EAV46753.1| hypothetical protein MB2181_01730 [Methylophilales bacterium
HTCC2181]
Length = 228
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 117/241 (48%), Gaps = 44/241 (18%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLC-----VRK 58
K + SA++L SGG DS+T L+ A + ++ +Y QR+ EL+ RL
Sbjct: 4 KVSKSAVILLSGGLDSATVLAIAKAEGYQCYAMNINYQQRHSAELKYAKRLAHHYDVEEY 63
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIF 115
K+V++ W ++ SSLT N +M I + +P+T+VP RN I
Sbjct: 64 KVVDIDLSW-----------------LTGSSLT-NKSMIIPQSASEGIPSTYVPARNTIM 105
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHT 170
+ A A + I IGV DYSGYPDCR + I++ E NL G+E S +T+H
Sbjct: 106 MTLALAWAETIKSQAIFIGVNAIDYSGYPDCREEYIKSFEVMANLATKTGVEGSRITIHA 165
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
PL+ L K E L G L ++ +CY + E G+ C C +C LR++G
Sbjct: 166 PLIHLDKAEIISLGIQKG------LDYSKTVSCY-----QATEEGHACGKCDSCRLRREG 214
Query: 231 W 231
+
Sbjct: 215 F 215
>gi|103486841|ref|YP_616402.1| ExsB [Sphingopyxis alaskensis RB2256]
gi|98976918|gb|ABF53069.1| ExsB [Sphingopyxis alaskensis RB2256]
Length = 227
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
I + ++L SGG DS C A + R+ L+ DY QR++VELE + +
Sbjct: 3 IMSGKTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHV---- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATL 122
E +LPL L S+LT ++ + ++P T+VP RN+IFL L
Sbjct: 59 -----GAAEHIVLPLD-LRRFGGSALTADIDVPKDGVGTDIPVTYVPARNLIFLSLTLGL 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL-------GMESHVTVHTPLMWL 175
A +IVIGV DYSGYPDCR I+ E L G+ H +H PL +
Sbjct: 113 AEARQAADIVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVRFH--IHAPLQHM 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + A +G + S +CY D E G C +C +C LR+KG+ +
Sbjct: 171 TKADIAAEAARLG------MDAAMSWSCY----DPTPE-GLHCGACDSCRLRRKGFAD 217
>gi|119511109|ref|ZP_01630227.1| hypothetical protein N9414_16856 [Nodularia spumigena CCY9414]
gi|119464204|gb|EAW45123.1| hypothetical protein N9414_16856 [Nodularia spumigena CCY9414]
Length = 234
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 107/240 (44%), Gaps = 37/240 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKKIVEL 63
A++L SGG DSST L A +SFDY QR++ EL V+ ++V
Sbjct: 12 AVILLSGGLDSSTVLYQAKADGYECHPISFDYQQRHRRELHSAFLVAQTLGVVKHQVVNF 71
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ W S D + +L + ++ N+P T+VP RN IFL FA
Sbjct: 72 DLRLWGGSALTDETI-----------NLPQERSLDEMSQNIPVTYVPARNTIFLSFALGY 120
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
A + + IGV DYSGYPDCR D I+A++ LG + + + + PL+ LKK
Sbjct: 121 AEAIAAQRVYIGVNALDYSGYPDCRPDYIQAMQKVFQLGTKQGREGNPIKIVAPLIDLKK 180
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
E +L +G + E + +CY G C C +C LR + E K
Sbjct: 181 TEIIQLGNQLG------VPWELTWSCYAGS-------DVACGVCDSCRLRLAAFAELGLK 227
>gi|294626852|ref|ZP_06705444.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294665415|ref|ZP_06730703.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292598866|gb|EFF43011.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292604826|gb|EFF48189.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 224
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 31/231 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ R+ + +V
Sbjct: 4 AVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVADAQGVVA------ 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H + L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 58 ------HKVVDVDLRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVIG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 112 ANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L S CY D R C C AC LR G+ +
Sbjct: 172 EGVRLG----VDFGLTVS--CYRADADGR-----ACGHCDACRLRAAGFAD 211
>gi|78185805|ref|YP_378239.1| ExsB [Synechococcus sp. CC9902]
gi|110816271|sp|Q3AUG1|QUEC_SYNS9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78170099|gb|ABB27196.1| ExsB [Synechococcus sp. CC9902]
Length = 226
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 22/228 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + A + DRV LSFDYGQR++ EL+ V +
Sbjct: 5 TAIALLSGGLDSATAAALAQEAGDRVIGLSFDYGQRHRRELKAAAKVAAHL--------- 55
Query: 70 SLGEDHILPLAILGDISHSSLT---KNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L E H + + LG S+LT + V +++ +P T+VPGRN +F+ +LA
Sbjct: 56 NLAEHHQVDVN-LGAWGGSALTDPNQTVPTSGVEEGVIPVTYVPGRNTVFIAIGLSLAEA 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G +V+GV DYSGYPDCR D + A +T L ++ H P +W + W +
Sbjct: 115 RGAERLVLGVNAVDYSGYPDCRPDYLDAFQTLATLSSKAGREGHGPQLWAPLVQ-WSKTK 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + + E+ +CY G C C +C +R E
Sbjct: 174 IVDEALRLGVPIGETWSCYSGGSRP-------CGVCDSCRIRDSALRE 214
>gi|297539672|ref|YP_003675441.1| exsB protein [Methylotenera sp. 301]
gi|297259019|gb|ADI30864.1| exsB protein [Methylotenera sp. 301]
Length = 230
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 30/234 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K +A++L SGG DS+TCL+ A + LS DY QR+ EL K + +M
Sbjct: 4 KTKKNAVVLLSGGLDSATCLAIAKSQGFDCYCLSLDYHQRHIAELH----AAKNVANVMG 59
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATL 122
L L++ G S+LT + A+ + ++ +P T+VP RN I L A
Sbjct: 60 AAAHKTAN---LDLSLFGG---SALTDD-AIAVPESETAGIPITYVPARNTIMLSLALAW 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKK 177
A L +I IGV DYSGYPDCR + ++A + NL +S V T+H PL+ + K
Sbjct: 113 AEVLKSQDIFIGVNALDYSGYPDCRGEYVKAFQAMANLATKSAVEGHAITIHAPLIDMTK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ L ++G V+ + S CY + G C C +C LR++G+
Sbjct: 173 AQIVTLGTELG----VDYAMTVS--CY-----QADSHGEACGLCDSCRLRREGF 215
>gi|87308580|ref|ZP_01090720.1| ExsB protein [Blastopirellula marina DSM 3645]
gi|87288672|gb|EAQ80566.1| ExsB protein [Blastopirellula marina DSM 3645]
Length = 234
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + + L+F YGQR++ E+E K
Sbjct: 4 AIVLLSGGLDSTTMLAIAKSQGFTISALTFAYGQRHQSEVESARRTAKAFNV-------- 55
Query: 71 LGEDHILPLAILGDISHSSLT------KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+DH + L S+LT K+ + +P T+VP RN IFL +A +A
Sbjct: 56 --QDHTVIDIDLRAFGGSALTDMIDVPKDRTLDEMTAAIPITYVPARNTIFLSYALAIAE 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL------GMESHVTVHTPLMWLKKY 178
+I IGV DY+GYPDCR + + A + NL G + +HTPL+ K
Sbjct: 114 VREAFDIFIGVNSLDYAGYPDCRPEYVSAFQAMANLATAQAVGSGPQLNIHTPLIHKPKA 173
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E + ++G + + +CY D R C C AC LR++G+ +
Sbjct: 174 EIIQAGIELG------VDYSTTVSCYEANGDGR-----ACGHCDACILRRQGFQQ 217
>gi|148243543|ref|YP_001228700.1| PP-loop superfamily ATPase [Synechococcus sp. RCC307]
gi|189029542|sp|A5GWT8|QUEC_SYNR3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|147851853|emb|CAK29347.1| Predicted PP-loop superfamily ATPase [Synechococcus sp. RCC307]
Length = 222
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 107/227 (47%), Gaps = 20/227 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + L SGG DS+T + A + RV LSFDYGQR++ EL V + +
Sbjct: 4 TTIALLSGGLDSATAAALAREAGHRVIGLSFDYGQRHQRELRAAAEVAQAL--------- 54
Query: 70 SLGEDHILP--LAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L E H + LA G S + L + V +QD +P+T+VPGRN +F+ +LA
Sbjct: 55 GLAEHHTINVNLAAWGGSSLTDLDQPVPDQGVQDGVIPSTYVPGRNTVFIALGLSLAEAK 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +V+GV DYSGYPDCR D + A + +L S H +W E W +
Sbjct: 115 GAERLVLGVNAIDYSGYPDCRPDYLDAYQHLADLASRSGREGHGTQLWAPLVE-WSKTKI 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +N+ + + +CY G + C C +C +R E
Sbjct: 174 VEEALRLNVPIASTWSCYAGGD-------HPCGVCDSCRIRDAALRE 213
>gi|86160217|ref|YP_467002.1| ExsB protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|110816208|sp|Q2IG55|QUEC_ANADE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|85776728|gb|ABC83565.1| preQ(0) biosynthesis protein QueC [Anaeromyxobacter dehalogenans
2CP-C]
Length = 234
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 104/245 (42%), Gaps = 34/245 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M +A A++L SGG DSSTCL+ A LS DYGQR+K EL
Sbjct: 1 MAKATSEARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGELA--------- 51
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-------KNVAMKIQDNNLPNTFVPGRNI 113
+ H + L S+LT K + ++P T+VP RN
Sbjct: 52 -RARRIARALGAAGHRVVKVDLSAFGGSALTDAAIAVPKGRSEARMARDIPVTYVPARNT 110
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGMESH-VTV 168
+ L A A +G I +GV DYSGYPDCR + A E A G+E H + +
Sbjct: 111 VMLSLALAHAEVIGAEQIFVGVNAIDYSGYPDCRPAFLHAFERLAKVATRAGVEGHPLRI 170
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
PL+ L K +L +G + L +CY R G C C AC LR+
Sbjct: 171 RAPLLRLSKAGIVRLGTKLGVPYRMTL------SCYDPIR------GRACGRCDACSLRR 218
Query: 229 KGWME 233
KG+ E
Sbjct: 219 KGFAE 223
>gi|148554324|ref|YP_001261906.1| exsB protein [Sphingomonas wittichii RW1]
gi|189029534|sp|A5V652|QUEC_SPHWW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148499514|gb|ABQ67768.1| exsB protein [Sphingomonas wittichii RW1]
Length = 230
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 32/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS A ++ + L+ DY QR++VELE K++ +
Sbjct: 12 AIVLLSGGLDSMVSGGIAREQGFALAALTIDYNQRHRVELE----AAKRVAA-------A 60
Query: 71 LGED-HI-LPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRL 126
LG D H+ LPL + SSLT ++ + +P+T+VP RN IFL A A
Sbjct: 61 LGVDRHVTLPLNLRA-FGGSSLTDDIDVPKDGVMPGIPSTYVPARNTIFLSLALGFAEAT 119
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGMESH-VTVHTPLMWLKKYETW 181
G +I +GV DYSGYPDCR + I A + A +G+E T+H PL + K +
Sbjct: 120 GARDIFLGVNALDYSGYPDCRPEFIAAFQHLADLATKMGVEGQGFTIHAPLQHMTKADIA 179
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A +G L S +CY D ++ C C +C LR KG+ +
Sbjct: 180 QEAARLG------LDAGMSWSCYDPTPDGKH-----CGLCDSCRLRSKGFAD 220
>gi|197124245|ref|YP_002136196.1| exsB protein [Anaeromyxobacter sp. K]
gi|196174094|gb|ACG75067.1| exsB protein [Anaeromyxobacter sp. K]
Length = 234
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 104/245 (42%), Gaps = 34/245 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M +A A++L SGG DSSTCL+ A LS DYGQR+K EL
Sbjct: 1 MAKATSEARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGELA--------- 51
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-------KNVAMKIQDNNLPNTFVPGRNI 113
+ H + L S+LT K + ++P T+VP RN
Sbjct: 52 -RARRIARALGAAGHRVVKVDLSAFGGSALTDAAIAVPKGRSEARMARDIPVTYVPARNT 110
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGMESH-VTV 168
+ L A A +G I +GV DYSGYPDCR +RA E A G+E + +
Sbjct: 111 VMLSLALAHAEVIGAEQIFVGVNAIDYSGYPDCRPAFLRAFERLAKVATRAGVEGRPLRI 170
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
PL+ L K +L +G + L +CY R G C C AC LR+
Sbjct: 171 RAPLLRLSKAGIVRLGTKLGVPYRMTL------SCYDPIR------GRACGRCDACRLRR 218
Query: 229 KGWME 233
KG+ E
Sbjct: 219 KGFAE 223
>gi|118574278|sp|Q1GTF3|QUEC1_SPHAL RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
Length = 224
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 108/233 (46%), Gaps = 32/233 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ ++L SGG DS C A + R+ L+ DY QR++VELE + +
Sbjct: 5 TVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHV--------- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLG 127
E +LPL L S+LT ++ + ++P T+VP RN+IFL LA
Sbjct: 56 GAAEHIVLPLD-LRRFGGSALTADIDVPKDGVGTDIPVTYVPARNLIFLSLTLGLAEARQ 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL-------GMESHVTVHTPLMWLKKYET 180
+IVIGV DYSGYPDCR I+ E L G+ H +H PL + K +
Sbjct: 115 AADIVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVRFH--IHAPLQHMTKADI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
A +G + S +CY D E G C +C +C LR+KG+ +
Sbjct: 173 AAEAARLG------MDAAMSWSCY----DPTPE-GLHCGACDSCRLRRKGFAD 214
>gi|116074186|ref|ZP_01471448.1| ExsB [Synechococcus sp. RS9916]
gi|116069491|gb|EAU75243.1| ExsB [Synechococcus sp. RS9916]
Length = 228
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + AL+ RV LSFDYGQR++ EL+ + +
Sbjct: 8 TAIALLSGGLDSATAAALALEAGHRVIGLSFDYGQRHRRELDAAAALANTL--------- 58
Query: 70 SLGEDHILP--LAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L E H + LA G S + + + +++ +P+T+VPGRN +F+ +LA
Sbjct: 59 GLAEHHTIAVNLASWGGSSLTDTQQEIPTDGVEEGVIPSTYVPGRNTVFISIGLSLAEAR 118
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G IV+GV DYSGYPDCR D + A +T +L + H P +W TW
Sbjct: 119 GADRIVLGVNAVDYSGYPDCRPDYLAAFQTLADLSSKVGREGHGPQLW-APLVTWSKQTI 177
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ + + ++++ +CY G C C +C +R
Sbjct: 178 VEEALRLQVPIDQTWSCYSGGAQP-------CGVCDSCRIR 211
>gi|284053643|ref|ZP_06383853.1| exsB protein [Arthrospira platensis str. Paraca]
gi|291569828|dbj|BAI92100.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 226
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 107/230 (46%), Gaps = 37/230 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKKIVEL 63
A++L SGG DSST L A LSF+Y QR+ ELE + VE
Sbjct: 3 AVILLSGGLDSSTVLYQAKADGYECYALSFNYQQRHLRELEAAAKIAQAAGVAAHQTVEF 62
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +W S D + L ++ S T +P T+VP RN IFL FA
Sbjct: 63 DLKRWGGSALTDDNIDLPCDRTLAEMSAT-----------IPITYVPARNTIFLSFALAY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
+G I IGV DYSGYPDCR D I A+++ LG + + +T++TPL+ LKK
Sbjct: 112 GEAIGADRIYIGVNALDYSGYPDCRPDYIVAMQSVFRLGTKQGREGNPITINTPLIDLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ +L +G + E + +CY G+ + C C AC LR
Sbjct: 172 TDIIQLGNSLG------VPWEHTWSCYGGEAE-------ACGVCDACRLR 208
>gi|157165515|ref|YP_001466416.1| ExsB protein [Campylobacter concisus 13826]
gi|189038900|sp|A7ZCA8|QUEC_CAMC1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157101540|gb|EAT99024.2| ExsB protein [Campylobacter concisus 13826]
Length = 221
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 117/232 (50%), Gaps = 38/232 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR----LCVRKKIVELMPK 66
A+ + SGG DS+ C A V L FDY QR ++ E R +C R +V+ +
Sbjct: 4 AVCIMSGGMDSTLCAVMAKRAGYDVVALHFDYNQRT-MKREKRAFDEICERLGVVKKIN- 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATL 122
L ++ + I ++LT + +M+I+ N++PNT+VP RN +F+ AA L
Sbjct: 62 ----------LDVSFIAQIGGNALT-DTSMQIRKDGVSNDVPNTYVPFRNGVFISIAAAL 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKYET 180
A + G I IGV E D SGYPDC+ I++I AINLG + + + TPL+ L K
Sbjct: 111 AEKEGAQAIYIGVVEEDSSGYPDCKESFIKSINEAINLGTSADFSCEIITPLVNLSK--- 167
Query: 181 WKLAQDIGGQDL-VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
DI + L +N +E + +CY + + C C +C LR G+
Sbjct: 168 ----ADIVSKSLELNSPIELTWSCYESEDE-------ACGLCDSCRLRLNGF 208
>gi|289207755|ref|YP_003459821.1| exsB protein [Thioalkalivibrio sp. K90mix]
gi|288943386|gb|ADC71085.1| exsB protein [Thioalkalivibrio sp. K90mix]
Length = 227
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE--TLSFDYGQRNKVELEC--RLCVRKKIVELMPK 66
A++L SGG DS+TCL+ A R D ++ LS DYGQR++ EL+ R+ + +
Sbjct: 7 AVVLLSGGLDSATCLAMA--RADGLDCHALSIDYGQRHRTELDAARRVAASQGV------ 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAY 124
+DH + L I S+LT + +A+ + +P T+VP RN +FL A LA
Sbjct: 59 ------QDHRVVRVDLTAIGGSALTDDAIAVPTEASEGIPVTYVPARNTVFLSLALGLAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
L + +G DYSGYPDCR I A + + V V PLM + K E
Sbjct: 113 TLDARLLYVGANAVDYSGYPDCRPAFIDAFRDLAQVATRAGVEGVRWEVRAPLMHMSKAE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G + ++ +CY D R C C +C +R++G+
Sbjct: 173 IIRAGASLG------VDYAQTVSCYQADPDGR-----ACGRCDSCRIRREGF 213
>gi|91776687|ref|YP_546443.1| ExsB [Methylobacillus flagellatus KT]
gi|118574290|sp|Q1GYT5|QUEC_METFK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91710674|gb|ABE50602.1| preQ(0) biosynthesis protein QueC [Methylobacillus flagellatus KT]
Length = 229
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 28/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + V LS DY QR++ EL+ V K + +M +
Sbjct: 5 AVVLLSGGLDSATVLAIARHQGYDVYCLSLDYQQRHRAELQAADRVTKALGAVMHRTVK- 63
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L L++ G S+LT ++A+ ++ +P T+VP RN I L A A L
Sbjct: 64 ------LDLSVFGG---SALTDASIAVPEVPSEGIPVTYVPARNTIMLSLALAWAEVLEA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A + NL +S V +H PL+ + K +
Sbjct: 115 RDIFIGVNALDYSGYPDCRGEYVHAFQAMANLATKSAVEGRTIAIHAPLIDMTKADIVTQ 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G V+ L S CY + G C C +C LR++G++
Sbjct: 175 GTSLG----VDYSLTVS--CYQAD-----DEGRACGVCDSCRLRRQGFV 212
>gi|21232444|ref|NP_638361.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767473|ref|YP_242235.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990579|ref|YP_001902589.1| Putative transcriptional regulator, ExsB family [Xanthomonas
campestris pv. campestris str. B100]
gi|81306547|sp|Q4UXK8|QUEC_XANC8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81793141|sp|Q8P6F6|QUEC_XANCP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764391|sp|B0RPZ6|QUEC_XANCB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21114225|gb|AAM42285.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66572805|gb|AAY48215.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. 8004]
gi|167732339|emb|CAP50531.1| Putative transcriptional regulator, ExsB family [Xanthomonas
campestris pv. campestris]
Length = 224
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V + K D
Sbjct: 4 AVVLLSGGMDSAAVIALAQEQGFAVHALSVRYGQRHTSELDAAARVAAAQGVVAHKVVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 63 ---------VDLRSIGGSALTADIDVPEAGGAGIPVTYVPARNTIMLSLALGWAEVVGAN 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 114 DLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVRAG 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L S CY D R C C AC LR G+ +
Sbjct: 174 VRLG----VDFGLTVS--CYNADADGR-----ACGHCDACRLRAAGFAD 211
>gi|157826116|ref|YP_001493836.1| trans-regulatory protein ExsB [Rickettsia akari str. Hartford]
gi|167016447|sp|A8GPK3|QUEC_RICAH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157800074|gb|ABV75328.1| Trans-regulatory protein ExsB [Rickettsia akari str. Hartford]
Length = 227
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 37/235 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + + ++SF+YGQRN EL +K+ EL+ ++
Sbjct: 4 AVMLVSGGADSATVLAMAREIGYEIHSMSFNYGQRNNAEL-------RKVKELIKEYNVK 56
Query: 71 LGEDHILPLAILG---------DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + L G D+ H V ++P T+VP RN IFL +A
Sbjct: 57 QHKIVDIDLRAFGGSALTDDNIDVPHYHDVNAVP-----EDVPVTYVPSRNTIFLSYALG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLK 176
A +G +I IGV +D + YPDCR + I++ E NL +T+HTPL+ +
Sbjct: 112 YAEVIGAKDIFIGVHTSDSANYPDCRPEYIKSFEKMANLATSIGIQGQKITIHTPLIDMT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + + + G D N I +CY D C +C AC +R +
Sbjct: 172 KEQIIRTGLKL-GVDYKNTI-----SCYEPTEDDS-----SCGNCLACMIRLDAF 215
>gi|254468087|ref|ZP_05081493.1| exsB protein [beta proteobacterium KB13]
gi|207086897|gb|EDZ64180.1| exsB protein [beta proteobacterium KB13]
Length = 227
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 114/232 (49%), Gaps = 36/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS T L+ A D FD L YGQR+ E + + KK
Sbjct: 5 AIVLLSGGLDSLTTLAIAQNDGFD-CYALHVIYGQRHSSETKAARNIAKKY--------- 54
Query: 70 SLGEDHILPLAILGDIS--HSSLTKNVAMKI---QDNNLPNTFVPGRNIIFLVFAATLAY 124
+L E + + D+S SS N M I + +P T+VP RN I + FAA A
Sbjct: 55 NLAEFREINV----DMSWLKSSALTNHDMTIPEERSEGIPVTYVPARNTIMMSFAAAWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
L I+++ +GV DYSGYPDCR + I A + +NLG ++ + +HTPL+ L K E
Sbjct: 111 SLAISHLFLGVNAVDYSGYPDCRPEFIDAFKKMVNLGTKAAIEGTPFNIHTPLIGLTKDE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G + S +CY ++ G C C +CYLR++G+
Sbjct: 171 IITKGCNLG------VDYSMSISCYQADQN-----GNACGRCDSCYLRRQGF 211
>gi|254239324|ref|ZP_04932647.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126171255|gb|EAZ56766.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 224
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++ +
Sbjct: 6 AVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGVI------- 58
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E ++ L + G + S+LT +++A+ + +P T+VP RN +FL A A L
Sbjct: 59 --EHKVIGLDLNG-MGGSALTDESIAVPESPSEGIPVTYVPARNTVFLSLALGWAEVLDA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL +L K + ++
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQIIQV 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY E G C C +C LR G+
Sbjct: 176 GVARG----VDYGLTVS--CYQAD-----EQGRACGKCDSCRLRADGF 212
>gi|282898083|ref|ZP_06306078.1| ExsB [Raphidiopsis brookii D9]
gi|281197227|gb|EFA72128.1| ExsB [Raphidiopsis brookii D9]
Length = 282
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 114/246 (46%), Gaps = 44/246 (17%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVE--TLSFDYGQRNKVELECRLCVRK--KIV 61
K A++L SGG DSST L A R D E +SFDY QR++ EL+ + + + ++V
Sbjct: 54 KSIMKAVILLSGGLDSSTVLYQA--RADGYECYVISFDYHQRHRRELQSAISIAQSLEVV 111
Query: 62 EL------MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
E + W S D+ +P+ +N + ++P T+VP RN IF
Sbjct: 112 EHQLVTFDLRSWGGSALTDNSIPVP-----------QNRPLDQMSGSIPITYVPARNTIF 160
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHT 170
L FA A + + IGV DYSGYPDCR D I A++ LG + + +
Sbjct: 161 LSFALAYAEAIRAERVYIGVNALDYSGYPDCRPDYIHAMQEVFRLGTKQGREGKRIDIVA 220
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
PL+ L K + +L +L+ + E + +CY G + C C +C LR
Sbjct: 221 PLINLTKSQIIQLG------NLLGVPWELTWSCYSGDQQP-------CGVCDSCQLR--- 264
Query: 231 WMEFKE 236
W F E
Sbjct: 265 WAAFHE 270
>gi|77460619|ref|YP_350126.1| ExsB [Pseudomonas fluorescens Pf0-1]
gi|110816245|sp|Q3K7W9|QUEC_PSEPF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|77384622|gb|ABA76135.1| preQ(0) biosynthesis protein QueC [Pseudomonas fluorescens Pf0-1]
Length = 230
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 110/229 (48%), Gaps = 30/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR+ EL V + +
Sbjct: 12 AVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRSHAELHAAARVARDL---------G 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ E ++ L + G + S+LT + ++ I + +P T+VP RN +FL A A LG
Sbjct: 63 VVEHKVIGLNLNG-MGGSALT-DTSIDIPEELGEGIPVTYVPARNTVFLSLALGWAEVLG 120
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR + I + E NL ++ V + PL L K + +
Sbjct: 121 ARDIFIGVNAVDYSGYPDCRPEFIESFERMANLATKAGVEGNGFRIQAPLQNLSKAQIVQ 180
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY D R C C +C LR +G+
Sbjct: 181 AGVKLG----VDYGLTVS--CYQADDDGR-----ACGKCDSCRLRAEGF 218
>gi|226354846|ref|YP_002784586.1| Queuosine biosynthesis protein [Deinococcus deserti VCD115]
gi|226316836|gb|ACO44832.1| putative Queuosine biosynthesis protein [Deinococcus deserti
VCD115]
Length = 237
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A R LSF YGQR+ VEL+ + +
Sbjct: 8 AVVLLSGGLDSSTVLGIATRRDGYTCAALSFRYGQRHTVELDRAAQIARH---------- 57
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
G +H + LG S+LT D +P T+VPGRN +F+ +LA
Sbjct: 58 -FGAEHRIIDINLGSFGGSALTDETITVPTDGADDGVIPPTYVPGRNTVFIAIGLSLAEA 116
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYET 180
+G I +G+ DYSGYPDCR + + A + NL G+E H + PL+ + K +
Sbjct: 117 IGAERIYLGINAVDYSGYPDCRPEYLEAYQHLANLATKAGLEGHGAALVAPLLHMTKVDI 176
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
A ++G + ++ + +CY G + C C +C +R + E
Sbjct: 177 VNAALELG------VPVDVTWSCYQGGTEP-------CGVCDSCRIRDRALTE 216
>gi|326389108|ref|ZP_08210689.1| ExsB [Novosphingobium nitrogenifigens DSM 19370]
gi|326206414|gb|EGD57250.1| ExsB [Novosphingobium nitrogenifigens DSM 19370]
Length = 214
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 23 TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAIL 82
C A ++ V L+FDY QR++VEL+ V ++ + ILPL L
Sbjct: 2 VCAGLAREQGFEVLALTFDYNQRHRVELDASRKVAARV---------GVERHVILPLD-L 51
Query: 83 GDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDY 140
S+LT ++A+ +P T+VP RN++FL A A G ++I IGV DY
Sbjct: 52 RQFGGSALTDDIAVPKDGVGEEIPVTYVPARNLVFLSLALAWAEAAGSSDIFIGVNALDY 111
Query: 141 SGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNL 195
SGYPDCR + I E + + +V +H PL +LKK + + A +G L
Sbjct: 112 SGYPDCRPEFIGGFEALARVATKFGDKGGNVKIHAPLQYLKKADIAREAVRLG------L 165
Query: 196 ILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
ES +CY D R C C +C LR+ G+ E
Sbjct: 166 ETGESWSCYDPLPDGR-----ACGLCDSCRLRRAGFKE 198
>gi|229592291|ref|YP_002874410.1| putative transcriptional regulator [Pseudomonas fluorescens SBW25]
gi|259551561|sp|C3JYR8|QUEC_PSEFS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|229364157|emb|CAY51802.1| putative transcriptional regulatory protein [Pseudomonas
fluorescens SBW25]
Length = 224
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A + T+SFDYGQR++ EL V + +
Sbjct: 6 AVILLSGGLDSATVVAMAQAQGYSCYTMSFDYGQRHRAELNAAARVARDM---------G 56
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A L
Sbjct: 57 VVEHKVIGLNLNG-IGGSALTDSSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLNA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + + E NL ++ V + PL L K + K
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFRILAPLQNLSKADIVKA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY D R C C +C LR +G+
Sbjct: 176 GVGLG----VDYSLTVS--CYQADDDGR-----ACGKCDSCRLRAEGF 212
>gi|219850958|ref|YP_002465390.1| exsB protein [Methanosphaerula palustris E1-9c]
gi|254764360|sp|B8GJL3|QUEC_METPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|219545217|gb|ACL15667.1| exsB protein [Methanosphaerula palustris E1-9c]
Length = 221
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 106/233 (45%), Gaps = 33/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKD 69
A+ L SGG DSST A D + L +YGQR K EL+ + +
Sbjct: 3 AVCLLSGGMDSSTLAYVAKDMGYHIHALHLNYGQRTEKKELQSATAIAR----------- 51
Query: 70 SLGEDHILPLAI--LGDISHSSLT-KNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLA 123
SL + +PL + SSLT + + + D N LPNT+VP RN L A + A
Sbjct: 52 SLSAEEFIPLDLGYFKAFGKSSLTDPAIDVDVFDENRPELPNTYVPFRNANLLSIATSFA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETW 181
I IGV DYSGYPDCR I+A + ++LG +H+ + TP + L K +
Sbjct: 112 ESRDADAIFIGVQALDYSGYPDCRPAFIQAFQQVMDLGTADGTHIDLLTPFIGLTKTDIL 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ D+G + E + +CY + C C +C+ RQK + E
Sbjct: 172 RKGLDLG------VPYEHTWSCYQNEEK-------ACGVCGSCHFRQKAFAEL 211
>gi|113475545|ref|YP_721606.1| exsB protein [Trichodesmium erythraeum IMS101]
gi|123056780|sp|Q114E1|QUEC_TRIEI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110166593|gb|ABG51133.1| exsB protein [Trichodesmium erythraeum IMS101]
Length = 222
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L A +SFDY QR+ EL+ KKI D+
Sbjct: 3 AVILLSGGLDSSTVLYQAKADGCECYAISFDYQQRHLRELDSA----KKIA-------DT 51
Query: 71 LG--EDHILPL-------AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+G E HI+ + L D S L + ++ N+P T+VP RN IFL FA
Sbjct: 52 VGVIEHHIVSFDLRSWGGSALTD-SQIDLPSDRDLEEMSQNIPITYVPARNTIFLSFALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLK 176
A + + + IGV DYSGYPDCR D I A++ LG + + PL+ +K
Sbjct: 111 YAEVVNASRVYIGVNALDYSGYPDCRPDYILAMQEVFRLGTRQGREGEAIAIVAPLIEMK 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K E +L +G + E++ +CY G C C +C LR + E
Sbjct: 171 KTEIIQLGNSLG------VPWEKTWSCYAGGEKP-------CGICDSCKLRLTAFQEL 215
>gi|149185387|ref|ZP_01863703.1| exsB protein [Erythrobacter sp. SD-21]
gi|148830607|gb|EDL49042.1| exsB protein [Erythrobacter sp. SD-21]
Length = 238
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 108/238 (45%), Gaps = 48/238 (20%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS + A +R + L+ DYGQR+ EL+ + +K
Sbjct: 12 AVVLLSGGLDSMVTAALARERGHALHALTIDYGQRHMRELQSAKSIAEK----------- 60
Query: 71 LG-EDHI-LPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRL 126
LG E H+ LPL L S+LT ++ + N++P T+VP RN++FL A
Sbjct: 61 LGVERHVELPLD-LRRFGGSALTADIDVPKTGVGNDIPVTYVPARNLVFLALTTAFAETS 119
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
G +I IGV DYSGYPDCR + I + LG + V ++H PL + K +
Sbjct: 120 GSRDIFIGVNALDYSGYPDCRPEFIASFAETARLGTKQGVEGEPFSIHAPLQHMSKAD-- 177
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEW--------GYGCNSCPACYLRQKGW 231
I E H L D + W G C +C +C LR+KG+
Sbjct: 178 --------------IARECHRLAL---DPAWSWSCYDPTPEGTACGACDSCRLRRKGF 218
>gi|154174066|ref|YP_001407913.1| ExsB protein [Campylobacter curvus 525.92]
gi|189038901|sp|A7GXH1|QUEC_CAMC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|112803412|gb|EAU00756.1| ExsB protein [Campylobacter curvus 525.92]
Length = 223
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 113/228 (49%), Gaps = 30/228 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ C A + L FDY QR R+K+ + D
Sbjct: 4 AVCIMSGGMDSTLCAVMAKREGYEIIALHFDYEQRTMR--------REKMA--FEQICDY 53
Query: 71 LGEDHILPL--AILGDISHSSLT-KNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYR 125
LG L L + + DI ++LT KN+A+ + +PNT+VP RN IF+ AA LA +
Sbjct: 54 LGIKKRLNLDVSFIADIGGNALTDKNLAVSKSGLGDEIPNTYVPFRNGIFISIAAALAEK 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
G I IGV E D SGYPDC+ + I + AIN+G E+ + + TPL+ L K +
Sbjct: 114 EGAQAIYIGVVEEDSSGYPDCKGEFIERMNAAINVGTAPETKIKIVTPLVNLSKADIVAK 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + G LE + +CY +R+ C C +C LR +G+
Sbjct: 174 SLEFGSP------LELTWSCY--EREDE-----ACGLCDSCRLRLRGF 208
>gi|220919027|ref|YP_002494331.1| exsB protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956881|gb|ACL67265.1| exsB protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 234
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 103/245 (42%), Gaps = 34/245 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M KA A++L SGG DSSTCL+ A LS DYGQR+K EL
Sbjct: 1 MAKATSKARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGELA--------- 51
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-------KNVAMKIQDNNLPNTFVPGRNI 113
+ H + L S+LT K + ++P T+VP RN
Sbjct: 52 -RARRIARALGAAGHRVVKVDLSAFGGSALTDAAIAVPKGRSEARMARDIPVTYVPARNT 110
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGMESH-VTV 168
+ L A A +G I +GV DYSGYPDCR +RA E A G+E + +
Sbjct: 111 VMLSLALAHAEVIGAEQIFVGVNAIDYSGYPDCRPAFLRAFERLAKVATRAGVEGRPLRI 170
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
PL+ L K +L + + + +CY R G C C AC LR+
Sbjct: 171 RAPLLRLSKAGIVRLGTKL------RVPYRLTLSCYDPIR------GRACGRCDACRLRR 218
Query: 229 KGWME 233
KG+ E
Sbjct: 219 KGFAE 223
>gi|283956194|ref|ZP_06373679.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni 1336]
gi|283792348|gb|EFC31132.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni 1336]
Length = 224
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 120/243 (49%), Gaps = 34/243 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
+ AL + SGG DS+ C A + L FDY QR + E EC K+I + +
Sbjct: 2 SKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKERECF----KQICKALKV 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL------PNTFVPGRNIIFLVFAA 120
K +IL ++ + DI ++LT + ++ I N L P T+VP RN IFL A
Sbjct: 58 EKS-----YILDVSFIKDIGGNALT-DKSIDIPKNELCISDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + V + TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME--FKE 236
+ +LA N+ LE + +CY K + C C +C LR +G+ + FK+
Sbjct: 172 KIVELALK------ENVPLELTWSCYESKDE-------ACGECDSCLLRLRGFEKAGFKD 218
Query: 237 KYQ 239
K +
Sbjct: 219 KIK 221
>gi|294013048|ref|YP_003546508.1| probable transcription regulator ExsB [Sphingobium japonicum UT26S]
gi|292676378|dbj|BAI97896.1| probable transcription regulator ExsB [Sphingobium japonicum UT26S]
Length = 230
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 110/235 (46%), Gaps = 38/235 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS A + R+ LS DY QR+++EL+ V + +
Sbjct: 9 AVVLLSGGLDSMVAGGLAREAGYRLFALSIDYNQRHRLELQAAGRVAAALNAI------- 61
Query: 71 LGEDHI-LPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLG 127
HI LPL L S+LT ++A+ +P T+VP RN IFL LA G
Sbjct: 62 ---SHIVLPLD-LTAFGGSALTADIAVPKGGVGAGIPITYVPARNTIFLSLTLGLAEVAG 117
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLMWLKKY---- 178
++ IGV DYSGYPDCR + I A + A G+E H + ++ PL + K
Sbjct: 118 ANDVFIGVNALDYSGYPDCRPEFIDAFQKMAALATKAGVEGHPIRINAPLQHMSKADIVR 177
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E ++L D G S +CY D R+ C C +C LR KG++E
Sbjct: 178 EAYRLGLDTG----------LSWSCYDPTPDGRH-----CGLCDSCRLRSKGFVE 217
>gi|58581302|ref|YP_200318.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623226|ref|YP_450598.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577420|ref|YP_001914349.1| ExsB protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|325929353|ref|ZP_08190483.1| transcriptional regulator;preQ(0) biosynthesis protein QueC
[Xanthomonas perforans 91-118]
gi|75435924|sp|Q5H288|QUEC_XANOR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816278|sp|Q2P553|QUEC_XANOM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764392|sp|B2STI7|QUEC_XANOP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|58425896|gb|AAW74933.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367166|dbj|BAE68324.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188521872|gb|ACD59817.1| ExsB protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|325540265|gb|EGD11877.1| transcriptional regulator;preQ(0) biosynthesis protein QueC
[Xanthomonas perforans 91-118]
Length = 224
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V + K D
Sbjct: 4 AVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVVAHKVVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 63 ---------VDLRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVGAN 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 114 DLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVREG 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L S CY D R C C AC LR G+ +
Sbjct: 174 VRLG----VDFGLTVS--CYRADADGR-----ACGHCDACRLRAAGFAD 211
>gi|49081904|gb|AAT50352.1| PA0976 [synthetic construct]
Length = 225
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++ +
Sbjct: 6 AVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGVI------- 58
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E ++ L + G + S+LT +++A+ + +P T+VP RN +FL A A L
Sbjct: 59 --EHKVIGLDLNG-MGGSALTDESIAVPESPSEGIPVTYVPARNTVFLSLALGWAEVLDA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL +L K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQIIQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY + E G C C +C LR G+
Sbjct: 176 GVARG----VDYGLTVS--CY-----QADEQGRACGKCDSCRLRADGF 212
>gi|15596173|ref|NP_249667.1| hypothetical protein PA0976 [Pseudomonas aeruginosa PAO1]
gi|107100432|ref|ZP_01364350.1| hypothetical protein PaerPA_01001457 [Pseudomonas aeruginosa PACS2]
gi|116048901|ref|YP_792298.1| hypothetical protein PA14_51670 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893053|ref|YP_002441922.1| hypothetical protein PLES_43381 [Pseudomonas aeruginosa LESB58]
gi|254245259|ref|ZP_04938581.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296390665|ref|ZP_06880140.1| hypothetical protein PaerPAb_21028 [Pseudomonas aeruginosa PAb1]
gi|81541661|sp|Q9I4Z2|QUEC_PSEAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|122258008|sp|Q02ID8|QUEC_PSEAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764368|sp|B7UXV6|QUEC_PSEA8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|9946884|gb|AAG04365.1|AE004531_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|32454317|gb|AAP82946.1| conserved hypothetical protein [Pseudomonas aeruginosa PA14]
gi|115584122|gb|ABJ10137.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198637|gb|EAZ62700.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218773281|emb|CAW29093.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
Length = 224
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++ +
Sbjct: 6 AVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGVI------- 58
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E ++ L + G + S+LT +++A+ + +P T+VP RN +FL A A L
Sbjct: 59 --EHKVIGLDLNG-MGGSALTDESIAVPESPSEGIPVTYVPARNTVFLSLALGWAEVLDA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL +L K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQIIQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY + E G C C +C LR G+
Sbjct: 176 GVARG----VDYGLTVS--CY-----QADEQGRACGKCDSCRLRADGF 212
>gi|33864486|ref|NP_896046.1| ATPase [Prochlorococcus marinus str. MIT 9313]
gi|81576635|sp|Q7V3W6|QUEC_PROMM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33641266|emb|CAE22396.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9313]
Length = 229
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 20/227 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + L SGG DS+T + A++ +V LSFDYGQR++ EL+ + +
Sbjct: 8 TTIALLSGGLDSATAAALAVEAGQKVIGLSFDYGQRHRKELQAADALAAHM--------- 58
Query: 70 SLGEDHILP--LAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L E H++ L G S + LT+ V + + D +PNT+VPGRN +F+ +LA
Sbjct: 59 GLSEHHVISVNLGSWGGSSLTDLTQTVPSEGVVDGVIPNTYVPGRNTVFIAIGLSLAEAR 118
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V+G+ DYSGYPDCR D +RA ++ +L ++ H +W + W Q
Sbjct: 119 NANQLVLGINAMDYSGYPDCRPDYLRAYQSLADLANKAGREGHGIKLWAPLID-WNKKQI 177
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + ++++ +CY G + C C +C +R E
Sbjct: 178 VQEALRLGVPIDKTWSCYSGGD-------HACGICDSCRIRDAALSE 217
>gi|330721754|gb|EGG99746.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC2047]
Length = 203
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 37 TLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM 96
+SF+YGQR EL ++IV+ M + E ++ + +G I S+LT +
Sbjct: 11 AISFNYGQRCNAEL----AAAERIVKSM-----GVIEHQVINID-MGKIGGSALTDDSID 60
Query: 97 KIQDN--NLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI 154
+D +P T+VP RN +FL FA A +G I IGV DYSGYPDCR + I A
Sbjct: 61 VPEDEPEGIPVTYVPARNTVFLSFALGWAEVIGAQEIYIGVSAVDYSGYPDCRPEFIEAF 120
Query: 155 ETAINLGMESHV-----TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
E NL ++ V + TPLM L K ET + +G V+ L + +CY D
Sbjct: 121 EAMANLATKAGVEGESIKIQTPLMHLSKAETVQAGIQLG----VDYSL--TVSCYQADDD 174
Query: 210 KRYEWGYGCNSCPACYLRQKGW 231
G C C +C LR KG+
Sbjct: 175 -----GKACGKCDSCRLRIKGF 191
>gi|330959275|gb|EGH59535.1| exsB protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 187
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 17/195 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTMTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT ++A+ + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPEAPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V T+ PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERTANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIG 188
L K + K +G
Sbjct: 171 NLSKSDIVKAGAALG 185
>gi|313202055|ref|YP_004040713.1| exsb protein [Methylovorus sp. MP688]
gi|312441371|gb|ADQ85477.1| exsB protein [Methylovorus sp. MP688]
Length = 225
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS DY QR+ EL +++ E + +
Sbjct: 5 AVVLLSGGLDSATVLAIARSQGYECYCLSLDYHQRHSAEL----LAAQRVAECLGAAEHK 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ L L++ G S+LT N Q +P T+VP RN I L A A L
Sbjct: 61 TVQ---LDLSLFGG---SALTDNRIDVPQSPTEGIPVTYVPARNTIMLSLALAWAEVLKS 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + +RA ++ NL ++ V TVH PL+ L K + K
Sbjct: 115 RDIFIGVNALDYSGYPDCRAEYVRAFQSMANLATKAAVEGDTITVHAPLIDLSKADIVKR 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + + +CY E G C C +C R++G++
Sbjct: 175 GSALGFDYGMTV------SCYQAD-----EEGRACGKCDSCRFRREGFL 212
>gi|313105863|ref|ZP_07792126.1| hypothetical protein PA39016_000110160 [Pseudomonas aeruginosa
39016]
gi|310878628|gb|EFQ37222.1| hypothetical protein PA39016_000110160 [Pseudomonas aeruginosa
39016]
Length = 224
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++ +
Sbjct: 6 AVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGVI------- 58
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E ++ L + G + S+LT +++A+ + +P T+VP RN +FL A A L
Sbjct: 59 --EHKVIGLDLNG-MGGSALTDESIAVPESPSAGIPVTYVPARNTVFLSLALGWAEVLDA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL +L K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQIIQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY + E G C C +C LR G+
Sbjct: 176 GVARG----VDYGLTVS--CY-----QADEQGRACGKCDSCRLRADGF 212
>gi|254000096|ref|YP_003052159.1| exsB protein [Methylovorus sp. SIP3-4]
gi|253986775|gb|ACT51632.1| exsB protein [Methylovorus sp. SIP3-4]
Length = 225
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS DY QR+ EL +++ E + +
Sbjct: 5 AVVLLSGGLDSATVLAIARSQGYECYCLSLDYHQRHSAEL----LAAQRVAECLGAAEHK 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ L L++ G S+LT N Q +P T+VP RN I L A A L
Sbjct: 61 TVQ---LDLSLFGG---SALTDNRIDVPQSPTEGIPVTYVPARNTIMLSLALAWAEVLKS 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + +RA ++ NL ++ V TVH PL+ L K + K
Sbjct: 115 RDIFIGVNALDYSGYPDCRAEYVRAFQSMANLATKAAVEGDTITVHAPLIDLSKADIVKR 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + + +CY E G C C +C R++G++
Sbjct: 175 GSALGFDYGMTV------SCYQAD-----EEGRACGKCDSCRFRREGFL 212
>gi|172036294|ref|YP_001802795.1| transcription regulator [Cyanothece sp. ATCC 51142]
gi|171697748|gb|ACB50729.1| transcription regulator [Cyanothece sp. ATCC 51142]
Length = 233
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 40/238 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------V 61
P A++L SGG DS+T + A+D+ V LS YGQR++ EL+ + + + +
Sbjct: 5 PVAVVLLSGGLDSATSAAIAIDQGYEVIALSLRYGQRHQRELDAAKIIAQTLNITQHYTI 64
Query: 62 EL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + +W S D L L G + +P+T+VPGRN +F+ A
Sbjct: 65 DVNIAQWGGSSLTDTSLSLPQSG--------------VDATIIPSTYVPGRNTVFIALAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
+LA G I +G+ DYSGYPDCR D ++A +T NL ++ + + PL+
Sbjct: 111 SLAEAKGAQAIYLGINAVDYSGYPDCRPDYLQAYQTLANLSSKAGLVGKAPQLLAPLITK 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + K A +G + + ++ +CY G+++ C C +C +R + +E
Sbjct: 171 TKVDIIKDAIKLG------VPITKTWSCYQGEQEP-------CGLCDSCRIRDQALIE 215
>gi|152985628|ref|YP_001349881.1| hypothetical protein PSPA7_4532 [Pseudomonas aeruginosa PA7]
gi|189038934|sp|A6V9Z6|QUEC_PSEA7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|150960786|gb|ABR82811.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 224
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++ +
Sbjct: 6 AVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGAI------- 58
Query: 71 LGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E ++ L + G + S+LT + + +P T+VP RN +FL A A L
Sbjct: 59 --EHKVIGLDLNG-MGGSALTDDSIAVPEAPSQGIPVTYVPARNTVFLSLALGWAEVLEA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL +L K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQIIQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY + + G C C +C LR G+
Sbjct: 176 GVARG----VDYGLTVS--CY-----QADDQGRACGKCDSCRLRADGF 212
>gi|302879777|ref|YP_003848341.1| exsB protein [Gallionella capsiferriformans ES-2]
gi|302582566|gb|ADL56577.1| exsB protein [Gallionella capsiferriformans ES-2]
Length = 225
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS+T L+ A + LS DYGQR+ EL +++ E +
Sbjct: 3 NAVVLLSGGLDSATVLAMARAQGYTCYALSVDYGQRHHSEL----AAAQRVAETLGAR-- 56
Query: 70 SLGEDHILPLAILGDISHSSLT-KNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
E ++ + + G S+LT N+A+ + +P T+VP RN I L A A L
Sbjct: 57 ---EHRVVNIDLTG-FGGSALTDNNIAVPEHASAGIPLTYVPARNTIMLSLALAWAEVLR 112
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR I A E NL ++ V T+H PL+ L K + K
Sbjct: 113 AQDIFIGVNAVDYSGYPDCRPAYIEAFERMANLATQAAVEGHPLTLHAPLLHLSKADIIK 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+++ + +CY + G C C +C LR G+
Sbjct: 173 ------SGSLLSVDYAATVSCYQAD-----DLGRACGVCDSCRLRSAGF 210
>gi|71275956|ref|ZP_00652238.1| ExsB [Xylella fastidiosa Dixon]
gi|71901398|ref|ZP_00683490.1| ExsB [Xylella fastidiosa Ann-1]
gi|170730260|ref|YP_001775693.1| transcriptional regulator [Xylella fastidiosa M12]
gi|254764394|sp|B0U2I4|QUEC_XYLFM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|71163189|gb|EAO12909.1| ExsB [Xylella fastidiosa Dixon]
gi|71728831|gb|EAO30970.1| ExsB [Xylella fastidiosa Ann-1]
gi|167965053|gb|ACA12063.1| transcriptional regulator [Xylella fastidiosa M12]
Length = 230
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + + + K D
Sbjct: 4 AVILLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARALNVVAHKVVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 63 ---------VDLRSIGGSALTDDIEIPDAGGEGIPVTYVPARNTIMLSLALGWAEVIGAA 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHTPLMWLKKYETWKLA 184
+I GV DYSGYPDCR I A ET NL G+E + + VH PL +L K E
Sbjct: 114 DIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHEG 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
G V+ L S CY D R C C AC LR G+ +
Sbjct: 174 LLHG----VDFGLTVS--CYRADVDGR-----ACGRCDACKLRAAGFAD 211
>gi|78048824|ref|YP_364999.1| ExsB family transcriptional regulator [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|110816277|sp|Q3BQG4|QUEC_XANC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78037254|emb|CAJ24999.1| putative transcriptional regulator, ExsB family [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 224
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V + K D
Sbjct: 4 AVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVVAHKVVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 63 ---------VDLRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVGAN 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 114 DLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGVGLRVHAPLQFLSKADIVREG 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L S CY D R C C AC LR G+ +
Sbjct: 174 VRLG----VDFGLTVS--CYRADADGR-----ACGHCDACRLRAAGFSD 211
>gi|195952408|ref|YP_002120698.1| exsB protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932020|gb|ACG56720.1| exsB protein [Hydrogenobaculum sp. Y04AAS1]
Length = 216
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 36/231 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR------LCVRKKIVELMP 65
L+L SGG DS+T L A +F +SFDYGQ++ VEL+ + +++ + +P
Sbjct: 5 LVLLSGGMDSATLLWEAKKKFKDAYAISFDYGQKHIVELKYAKELANMVGIKEHFIVKIP 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+K+ +L ++ K + + ++P T+VP RN+ FL A+ +A
Sbjct: 65 HYKEINFHSPLLSVS----------KKEIPKESYQEDVPITYVPMRNLTFLAIASGIADE 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWLKKYE 179
LGI NI I V D + YPDCR + I + E AIN G + + V+ P + K +
Sbjct: 115 LGIENIGIAVHAVD-APYPDCRPEFITSAEAAINAGSSFVVKTKKRIYVYAPFLGFSKKD 173
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
KL + +G + +++++CY G C C C R++
Sbjct: 174 IAKLGKTLG------VPFDKTYSCYEGTEPP-------CGECATCIQRKEA 211
>gi|71901606|ref|ZP_00683686.1| ExsB [Xylella fastidiosa Ann-1]
gi|71728616|gb|EAO30767.1| ExsB [Xylella fastidiosa Ann-1]
Length = 230
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + + + K D
Sbjct: 4 AVILLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARALNVVAHKVVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 63 ---------VDLRSIGGSALTDDIEIPDAGGEGIPVTYVPARNTIMLSLALGWAEVIGAA 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHTPLMWLKKYETWKLA 184
+I GV DYSGYPDCR I A ET NL G+E + + VH PL +L K E
Sbjct: 114 DIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHEG 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
G V+ L S CY D R C C AC LR G+ +
Sbjct: 174 LLHG----VDFGLTVS--CYRADVDGR-----ACGRCDACKLRAAGFAD 211
>gi|51473874|ref|YP_067631.1| trans-regulatory protein ExsB [Rickettsia typhi str. Wilmington]
gi|81389982|sp|Q68W43|QUEC_RICTY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|51460186|gb|AAU04149.1| trans-regulatory protein ExsB [Rickettsia typhi str. Wilmington]
Length = 227
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 27/227 (11%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS+T L+ A + + +SF+YGQRN EL+ K+ EL+ K+ +
Sbjct: 7 LLSGGIDSATVLAIASEMCYEIHAMSFNYGQRNHAELQ-------KVKELIKKYNVKQHK 59
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPN----TFVPGRNIIFLVFAATLAYRLGIT 129
+ L G + + ++ N LP T+VP RN IFL +A A +G
Sbjct: 60 IVDIDLRAFGGSALTDDNIDIPHYHSINELPEIVPVTYVPARNTIFLSYALGFAEVIGAQ 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGMES-HVTVHTPLMWLKKYETWKLA 184
+I IGV +D + YPDCR + I++ E A N+G++ +T+H PL+ + K + +
Sbjct: 120 DIFIGVHTSDSANYPDCRPEYIKSFEKMVNVATNMGIQGKKITIHAPLIDMTKEQIIRTG 179
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ G D N I +CY D C +C AC +R +
Sbjct: 180 LKL-GVDYKNTI-----SCYTPTEDD-----LSCGNCLACIIRLDAF 215
>gi|82703823|ref|YP_413389.1| ExsB [Nitrosospira multiformis ATCC 25196]
gi|110816235|sp|Q2Y5H4|QUEC_NITMU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|82411888|gb|ABB75997.1| preQ(0) biosynthesis protein QueC [Nitrosospira multiformis ATCC
25196]
Length = 232
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS YGQR+ EL + + + K
Sbjct: 4 AVVLLSGGLDSATVLAIARQQGYECYALSVSYGQRHGAELAAAKNLARSLGATAHKIIQ- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ L+ G + + + +P+T+VP RN I L A A LG +
Sbjct: 63 ------VDLSTFGGSALIDKEREIPTDGVTPGIPSTYVPARNTIMLSIALAWAEVLGSGD 116
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHTPLMWLKKYETWKLAQ 185
I IGV DYSGYPDCR + I A ET N+ G+E + + +H PLM L K E K
Sbjct: 117 IFIGVNAIDYSGYPDCRPEYIEAFETMANVATKAGIEGTRLAIHAPLMNLSKAEIIKRGG 176
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + + +CY + + G C C +C LR+ G+
Sbjct: 177 VLG------VDYSMTVSCY-----QADDAGLACGVCDSCRLRRAGF 211
>gi|166712979|ref|ZP_02244186.1| transcriptional regulator [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 224
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V + K D
Sbjct: 4 AVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVIAHKVVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 63 ---------VDLRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVGAN 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 114 DLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAELRVHAPLQFLSKADIVREG 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L S CY D R C C AC LR G+ +
Sbjct: 174 VRLG----VDFGLTVS--CYRADADGR-----ACGHCDACRLRAAGFAD 211
>gi|21243864|ref|NP_643446.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str.
306]
gi|81800086|sp|Q8PHW1|QUEC_XANAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21109465|gb|AAM37982.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str.
306]
Length = 224
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V + K D
Sbjct: 4 AVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVIAHKVVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 63 ---------VDLRSIGGSALTDDIEVPDAGGDGIPVTYVPARNTIMLSLALGWAEVIGAN 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY----ET 180
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K E
Sbjct: 114 DLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVREG 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L D G + +CY D R C C AC LR G+ +
Sbjct: 174 VRLGVDFG----------VTVSCYRADADGR-----ACGHCDACRLRAAGFAD 211
>gi|104783063|ref|YP_609561.1| hypothetical protein PSEEN4083 [Pseudomonas entomophila L48]
gi|122402284|sp|Q1I6F8|QUEC_PSEE4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|95112050|emb|CAK16777.1| conserved hypothetical protein; ExsB protein [Pseudomonas
entomophila L48]
Length = 224
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 6 AVILLSGGLDSATVVAMAKAEGYACYTMSFDYGQRHRAELDAAARVARDL---------G 56
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT N + +P T+VP RN +FL A A L
Sbjct: 57 VVEHKVIGLNLNG-IGGSALTDNSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL L K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNLSKAQIVQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY + R C C +C LR G+
Sbjct: 176 GIAQG----VDYSLTVS--CYQADDEGR-----ACGKCDSCRLRADGF 212
>gi|85709640|ref|ZP_01040705.1| ExsB [Erythrobacter sp. NAP1]
gi|85688350|gb|EAQ28354.1| ExsB [Erythrobacter sp. NAP1]
Length = 232
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 111/234 (47%), Gaps = 32/234 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS + AL+ V L+ DYGQR++ EL + +K+ +L + +
Sbjct: 11 PKAVVLLSGGLDSMVSAATALENGFDVHALTIDYGQRHRRELAAARSIAEKL-DLSSQTE 69
Query: 69 DSLGEDHILPLAILGDISHSSLTK--NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L L S+LT +V +++P T+VP RN++FL A
Sbjct: 70 LALD---------LTAFGGSALTDEIDVPKGGVGDDIPVTYVPARNLVFLALTTACAEAA 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
G +I IGV DYSGYPDCR + I + LG ++ V +H PL + K +
Sbjct: 121 GANDIFIGVNALDYSGYPDCRPEFIASFAETAKLGTKAGVEAAPFKIHAPLQNMTKADIA 180
Query: 182 KLAQDIGGQDLVNLILEE--SHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + L L+ S +CY D E G C C +C LR+KG+ E
Sbjct: 181 R--------ECARLRLDPSWSWSCY----DPTPE-GLACGLCDSCRLRKKGFEE 221
>gi|283953651|ref|ZP_06371182.1| exsB protein [Campylobacter jejuni subsp. jejuni 414]
gi|283794692|gb|EFC33430.1| exsB protein [Campylobacter jejuni subsp. jejuni 414]
Length = 226
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 120/241 (49%), Gaps = 30/241 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ AL + SGG DS+ C A ++ L FDY QR + E E R C + L
Sbjct: 2 SKKALCIISGGMDSTLCAYLAKKEDYKIIALHFDYEQRTQ-EKE-RDCFEQICKAL---- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD----NNLPNTFVPGRNIIFLVFAATL 122
+ + +IL ++ + DI ++LT KN+ + + + P T+VP RN IFL A +L
Sbjct: 56 --KVEKSYILDVSFIKDIGGNALTDKNIDIPKNELCINDTPPITYVPFRNGIFLSIAGSL 113
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYET 180
A + +I IGV E D SGYPDC + I+ + IN G + V + TPL+ L K +
Sbjct: 114 AEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQKFINEGTSKNFKVCIKTPLVRLNKAQI 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME--FKEKY 238
KLA N+ LE + +CY + + C C +C LR +G+ + FK+K
Sbjct: 174 VKLALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKDKI 220
Query: 239 Q 239
+
Sbjct: 221 K 221
>gi|167035185|ref|YP_001670416.1| exsB protein [Pseudomonas putida GB-1]
gi|189038937|sp|B0KTI3|QUEC_PSEPG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|166861673|gb|ABZ00081.1| exsB protein [Pseudomonas putida GB-1]
Length = 228
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL V + +
Sbjct: 6 AVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDL---------G 56
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT N+ + + +P T+VP RN +FL A A L
Sbjct: 57 VVEHKVIGLNLDG-IGGSALTDSNIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVLEA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL + K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY D R C C +C LR G+
Sbjct: 176 GMARG----VDYSLTVS--CYQADDDGR-----ACGKCDSCRLRADGF 212
>gi|121612477|ref|YP_999736.1| exsB protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|148926832|ref|ZP_01810511.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|167004712|ref|ZP_02270470.1| exsB protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|205355756|ref|ZP_03222526.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|167016421|sp|A1VX95|QUEC_CAMJJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|87248967|gb|EAQ71929.1| exsB protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|145844557|gb|EDK21664.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|205346533|gb|EDZ33166.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 224
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 34/243 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
+ AL + SGG DS+ C A + L FDY QR + E EC K+I + +
Sbjct: 2 SKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKEKECF----KQICKALKV 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL------PNTFVPGRNIIFLVFAA 120
K +IL ++ + DI ++LT + ++ I N L P T+VP RN IFL A
Sbjct: 58 EKS-----YILDVSFIKDIGGNALT-DKSIDIPKNELCISDVPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + V + TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME--FKE 236
+ +LA N+ LE + +CY + + C C +C LR +G+ + FK+
Sbjct: 172 KIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKD 218
Query: 237 KYQ 239
K +
Sbjct: 219 KIK 221
>gi|298492860|ref|YP_003723037.1| exsB protein ['Nostoc azollae' 0708]
gi|298234778|gb|ADI65914.1| exsB protein ['Nostoc azollae' 0708]
Length = 224
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 112/240 (46%), Gaps = 43/240 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE--TLSFDYGQRNKVELECRLCVRKKIVELMPK-- 66
A++L SGG DSST L A R D E +SFDY Q++ EL+ + V K + + +
Sbjct: 3 AVILLSGGLDSSTVLYQA--RADGCECYAISFDYQQQHCRELQSAVLVGKSVGVVQHQVV 60
Query: 67 ------WKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
W S L +D I +L + ++ N+P T+VP RN IFL FA
Sbjct: 61 NFDLRLWGGSALTDDAI------------ALPQARSLDEMSQNIPVTYVPARNTIFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMW 174
A + + IGV DYSGYPDCR D I+A++ LG + + + PL+
Sbjct: 109 LGYAEVIAAERVYIGVNALDYSGYPDCRPDYIQAMQEVFRLGTKQGREGQPINIIAPLVN 168
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LKK E +L +G + E + +CY G DK C C +C LR + E
Sbjct: 169 LKKTEIIQLGNQLG------VPWELTWSCYAGG-DK------ACGVCDSCRLRLAAFAEL 215
>gi|153950993|ref|YP_001397288.1| exsB protein [Campylobacter jejuni subsp. doylei 269.97]
gi|167016420|sp|A7H1A8|QUEC_CAMJD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|152938439|gb|ABS43180.1| exsB protein [Campylobacter jejuni subsp. doylei 269.97]
Length = 224
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 34/243 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
+ AL + SGG DS+ C A + L FDY QR + E EC K+I + +
Sbjct: 2 SKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKEKECF----KQICKALKV 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL------PNTFVPGRNIIFLVFAA 120
K +IL ++ + DI ++LT + ++ I N L P T+VP RN IFL A
Sbjct: 58 EKS-----YILDVSFIKDIGGNALT-DKSIDIPKNELCISDIPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + V + TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME--FKE 236
+ +LA N+ LE + +CY + + C C +C LR +G+ + FK+
Sbjct: 172 KIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKD 218
Query: 237 KYQ 239
K +
Sbjct: 219 KIK 221
>gi|57169010|ref|ZP_00368138.1| exsB protein [Campylobacter coli RM2228]
gi|57236928|ref|YP_178043.1| ExsB [Campylobacter jejuni RM1221]
gi|86150544|ref|ZP_01068768.1| exsB protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86152354|ref|ZP_01070564.1| exsB protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|86153997|ref|ZP_01072199.1| exsB protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|218561709|ref|YP_002343488.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|305432554|ref|ZP_07401715.1| transcription regulator ExsB [Campylobacter coli JV20]
gi|315123629|ref|YP_004065633.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|81354271|sp|Q5HXE2|QUEC_CAMJR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|166218759|sp|P0C634|QUEC_CAMJE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|57019555|gb|EAL56245.1| exsB protein [Campylobacter coli RM2228]
gi|57165732|gb|AAW34511.1| ExsB [Campylobacter jejuni RM1221]
gi|85838996|gb|EAQ56261.1| exsB protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85840651|gb|EAQ57903.1| exsB protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|85842535|gb|EAQ59748.1| exsB protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|112359415|emb|CAL34197.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|284925319|gb|ADC27671.1| ExsB [Campylobacter jejuni subsp. jejuni IA3902]
gi|304444265|gb|EFM36917.1| transcription regulator ExsB [Campylobacter coli JV20]
gi|307746979|gb|ADN90249.1| Queuosine biosynthesis protein queC [Campylobacter jejuni subsp.
jejuni M1]
gi|315017351|gb|ADT65444.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315057457|gb|ADT71786.1| Queuosine Biosynthesis QueC ATPase [Campylobacter jejuni subsp.
jejuni S3]
gi|315929942|gb|EFV09099.1| Transcriptional regulator ExsB [Campylobacter jejuni subsp. jejuni
305]
Length = 224
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 34/243 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
+ AL + SGG DS+ C A + L FDY QR + E EC K+I + +
Sbjct: 2 SKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKEKECF----KQICKALKV 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL------PNTFVPGRNIIFLVFAA 120
K +IL ++ + DI ++LT + ++ I N L P T+VP RN IFL A
Sbjct: 58 EKS-----YILDVSFIKDIGGNALT-DKSIDIPKNELCTSDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + V + TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME--FKE 236
+ +LA N+ LE + +CY + + C C +C LR +G+ + FK+
Sbjct: 172 KIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKD 218
Query: 237 KYQ 239
K +
Sbjct: 219 KIK 221
>gi|28198846|ref|NP_779160.1| transcriptional regulator [Xylella fastidiosa Temecula1]
gi|182681543|ref|YP_001829703.1| exsB protein [Xylella fastidiosa M23]
gi|81438814|sp|Q87CW1|QUEC_XYLFT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764393|sp|B2I4Y4|QUEC_XYLF2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|28056937|gb|AAO28809.1| transcriptional regulator [Xylella fastidiosa Temecula1]
gi|182631653|gb|ACB92429.1| exsB protein [Xylella fastidiosa M23]
gi|307579970|gb|ADN63939.1| exsB protein [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 230
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + + + K D
Sbjct: 4 AVILLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARALNVVAHKVVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 63 ---------VDLRSIGGSALTDDIEIPDAGGEGIPVTYVPARNTIMLSLALGWAEVIGAA 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHTPLMWLKKYETWKLA 184
+I GV DYSGYPDCR I A ET NL G+E + + VH PL +L K E
Sbjct: 114 DIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHEG 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
G V+ L S CY D R C C AC LR G+ +
Sbjct: 174 LLHG----VDFGLTVS--CYRADVDGR-----ACGRCDACKLRVAGFAD 211
>gi|157414337|ref|YP_001481593.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni 81116]
gi|166218758|sp|A8FJH9|QUEC_CAMJ8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157385301|gb|ABV51616.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni 81116]
gi|315931290|gb|EFV10259.1| 7-cyano-7-deazaguanine synthase [Campylobacter jejuni subsp. jejuni
327]
Length = 224
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 119/241 (49%), Gaps = 34/241 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
+ AL + SGG DS+ C A + L FDY QR + E EC K+I + +
Sbjct: 2 SKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKERECF----KQICKALKV 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL------PNTFVPGRNIIFLVFAA 120
K +IL ++ + DI ++LT + ++ I N L P T+VP RN IFL A
Sbjct: 58 EKS-----YILDVSFIKDIGGNALT-DKSIDIPKNELCISDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + V+ TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVYIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME--FKE 236
+ +LA N+ LE + +CY + + C C +C LR +G+ + FK+
Sbjct: 172 KIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKVGFKD 218
Query: 237 K 237
K
Sbjct: 219 K 219
>gi|26987961|ref|NP_743386.1| exsB protein [Pseudomonas putida KT2440]
gi|75489508|sp|Q9WWW8|QUEC_PSEPU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81441873|sp|Q88NI3|QUEC_PSEPK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24982674|gb|AAN66850.1|AE016313_9 exsB protein [Pseudomonas putida KT2440]
gi|5514781|emb|CAB50783.1| hypothetical protein [Pseudomonas putida]
gi|313497578|gb|ADR58944.1| ExsB [Pseudomonas putida BIRD-1]
Length = 224
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL V + +
Sbjct: 6 AVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDL---------G 56
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A L
Sbjct: 57 VVEHKVIGLNLDG-IGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL + K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY D R C C +C LR G+
Sbjct: 176 GMARG----VDYSLTVS--CYQADDDGR-----ACGKCDSCRLRADGF 212
>gi|320335722|ref|YP_004172433.1| exsB protein [Deinococcus maricopensis DSM 21211]
gi|319757011|gb|ADV68768.1| exsB protein [Deinococcus maricopensis DSM 21211]
Length = 230
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 111/232 (47%), Gaps = 33/232 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L+ A V LSF YGQR+ VELE + + +
Sbjct: 4 AVVLLSGGLDSSTTLAIAQQDGYAVTALSFRYGQRHTVELE-------RAAHIAAHF--- 53
Query: 71 LGEDHILPLAILGDISHSSLTKN-VAMKIQ---DNNLPNTFVPGRNIIFLVFAATLAYRL 126
G DH + +G S+LT + + + + D +P T+VPGRN +F+ A +LA +
Sbjct: 54 -GADHRVIDINIGSFGGSALTDDRIDVPVDATPDGVIPPTYVPGRNTVFIAVALSLAEAI 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTI----RAIETAINLGMESH-VTVHTPLMWLKKYETW 181
+ +G+ DYSGYPDCR + + R + A G+E + PL+ L K +
Sbjct: 113 EAERLYLGITAVDYSGYPDCRPEYLDAYQRLADLATKAGLEGRGAKLVAPLLTLTKLDIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A D+G + + + +CY G C C +C +R + ++
Sbjct: 173 RAALDLG------VPVNVTWSCYQGGTQP-------CGVCDSCRIRDRALID 211
>gi|88597669|ref|ZP_01100902.1| exsB protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|88189973|gb|EAQ93949.1| exsB protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|315928446|gb|EFV07758.1| thiamine biosynthesis family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 224
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 34/243 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
+ AL + SGG DS+ C A + L FDY QR + E EC K+I + +
Sbjct: 2 SKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKEKECF----KQICKALKV 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL------PNTFVPGRNIIFLVFAA 120
K +IL ++ + DI ++LT + ++ I N L P T+VP RN IFL A
Sbjct: 58 EKS-----YILDVSFIKDIGGNALT-DKSIDIPKNELCTSDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKY 178
+LA + ++ IGV E D SGYPDC + I+ + IN G + V + TPL+ L K
Sbjct: 112 SLAEKENCESVFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME--FKE 236
+ +LA N+ LE + +CY + + C C +C LR +G+ + FK+
Sbjct: 172 KIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKD 218
Query: 237 KYQ 239
K +
Sbjct: 219 KIK 221
>gi|189039053|sp|A2CDY7|QUEC_PROM3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 226
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 30/232 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + L SGG DS+T + A++ +V LSFDYGQR++ EL+ +++ M
Sbjct: 5 TTIALLSGGLDSATAAALAIEAGQKVIGLSFDYGQRHRKELQ----AAEELAACM----- 55
Query: 70 SLGEDHILP--LAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L E H++ L G S + LT+ V + + D +PNT+VPGRN +F+ +LA
Sbjct: 56 GLTEHHVISVNLGSWGGSSLTDLTQTVPSEGVVDGVIPNTYVPGRNTVFIAIGLSLAEAR 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETW 181
+V+GV DYSGYPDCR D ++A ++ +L G E H + + PLM K
Sbjct: 116 HANRLVLGVNAMDYSGYPDCRPDYLKAYQSLADLANKAGREGHGIKLWAPLMHWHKKRIV 175
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A +G + ++++ +CY G + C C +C +R E
Sbjct: 176 QEALRLG------VPIDKTWSCYSGGD-------HACGICDSCRIRDAALSE 214
>gi|325283488|ref|YP_004256029.1| exsB protein [Deinococcus proteolyticus MRP]
gi|324315297|gb|ADY26412.1| exsB protein [Deinococcus proteolyticus MRP]
Length = 233
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 33/234 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DSST L A+ LSF YGQR+ VELE + ++ +
Sbjct: 7 PRAVVLLSGGLDSSTVLGLAVRSGLEATALSFRYGQRHTVELE-------RAAQIAAHF- 58
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLAY 124
G H + +G S+LT + +A+ + D +P T+VPGRN +F+ +LA
Sbjct: 59 ---GAAHRVVDINIGSFGGSALTDEGLAVPQEATPDGVIPPTYVPGRNTVFIAVGLSLAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
+ ++ +G+ DYSGYPDCR D + A +T +L G E + PL+ + K +
Sbjct: 116 AIDAGSLHLGITAVDYSGYPDCRPDYLAAYQTLADLATVAGREGRGARLVAPLLEMSKVD 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A ++G + + + +CY G + C C +C +R + +
Sbjct: 176 IVRTALEVG------VPVHLTWSCYSGGSEP-------CGLCDSCRIRDEALLS 216
>gi|124024655|ref|YP_001018962.1| ATPase [Prochlorococcus marinus str. MIT 9303]
gi|123964941|gb|ABM79697.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9303]
Length = 229
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 30/232 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + L SGG DS+T + A++ +V LSFDYGQR++ EL+ +++ M
Sbjct: 8 TTIALLSGGLDSATAAALAIEAGQKVIGLSFDYGQRHRKELQ----AAEELAACM----- 58
Query: 70 SLGEDHILP--LAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L E H++ L G S + LT+ V + + D +PNT+VPGRN +F+ +LA
Sbjct: 59 GLTEHHVISVNLGSWGGSSLTDLTQTVPSEGVVDGVIPNTYVPGRNTVFIAIGLSLAEAR 118
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYETW 181
+V+GV DYSGYPDCR D ++A ++ +L G E H + + PLM K
Sbjct: 119 HANRLVLGVNAMDYSGYPDCRPDYLKAYQSLADLANKAGREGHGIKLWAPLMHWHKKRIV 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A +G + ++++ +CY G + C C +C +R E
Sbjct: 179 QEALRLG------VPIDKTWSCYSGGD-------HACGICDSCRIRDAALSE 217
>gi|110816279|sp|Q9PCC3|QUEC_XYLFA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 230
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + + K D
Sbjct: 4 AVVLLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARVLNVAAHKVVD- 62
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 63 ---------VDLRSIGGSALTDDIEIPDAGGKGIPVTYVPARNTIMLSLALGWAEVIGAA 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHTPLMWLKKYETWKLA 184
+I GV DYSGYPDCR I A ET NL G+E + + VH PL +L K E
Sbjct: 114 DIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHEG 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
G V+ L S CY D R C C AC LR G+ +
Sbjct: 174 VLHG----VDFGLTVS--CYRADVDGR-----ACGRCDACKLRAAGFAD 211
>gi|15838456|ref|NP_299144.1| transcriptional regulator [Xylella fastidiosa 9a5c]
gi|9106947|gb|AAF84664.1|AE004007_3 transcriptional regulator [Xylella fastidiosa 9a5c]
Length = 254
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + + K D
Sbjct: 28 AVVLLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARVLNVAAHKVVD- 86
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 87 ---------VDLRSIGGSALTDDIEIPDAGGKGIPVTYVPARNTIMLSLALGWAEVIGAA 137
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINL----GME-SHVTVHTPLMWLKKYETWKLA 184
+I GV DYSGYPDCR I A ET NL G+E + + VH PL +L K E
Sbjct: 138 DIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHEG 197
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
G V+ L S CY D R C C AC LR G+ +
Sbjct: 198 VLHG----VDFGLTVS--CYRADVDGR-----ACGRCDACKLRAAGFAD 235
>gi|149923844|ref|ZP_01912234.1| ExsB ATPase [Plesiocystis pacifica SIR-1]
gi|149815301|gb|EDM74846.1| ExsB ATPase [Plesiocystis pacifica SIR-1]
Length = 239
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 117/246 (47%), Gaps = 24/246 (9%)
Query: 12 LLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD- 69
++L SGG DS+T L+ A + RV LSF YGQR+ +EL C ++ + D
Sbjct: 1 MVLLSGGLDSTTVLAIAAREAGQRVHALSFAYGQRHALELGCAARQARRFDAAAHEVVDL 60
Query: 70 -SLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATLA 123
LG + P L S ++ A + Q +P+T+VP RN +FL +A A
Sbjct: 61 SHLGR-LVAPATSLVAASELAVPDAEARQRQLERGEAEAIPSTYVPARNTLFLSYALAWA 119
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYETWK 182
+G +I +GV DYSGYPDCR + + A E L ++ V V PL+ L+K +
Sbjct: 120 EVVGARDIWLGVNAVDYSGYPDCRPEFVAAFEAMARLATKATDVRVRAPLIDLEKGAIIE 179
Query: 183 LAQDIGGQDLVNLILEESHTCY----LGKRDKRYEWGYGCNSCPACYLRQKGW----MEF 234
+G + ++ +CY +G+ E C C +C LR++G+ +E
Sbjct: 180 RGLGLG------VDYGDTTSCYDPSSVGEPGSADERPLACGRCESCMLRRQGFAAAGVED 233
Query: 235 KEKYQD 240
+Y D
Sbjct: 234 PTRYAD 239
>gi|297570306|ref|YP_003691650.1| exsB protein [Desulfurivibrio alkaliphilus AHT2]
gi|296926221|gb|ADH87031.1| exsB protein [Desulfurivibrio alkaliphilus AHT2]
Length = 258
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 113/240 (47%), Gaps = 27/240 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKK 59
K A++L SGG DS+T L+ A R LSF YGQR+ ELE R
Sbjct: 14 KGQPAVVLLSGGLDSTTVLALAKAAGYRCHCLSFRYGQRHTQELELARANARHWGAARHL 73
Query: 60 I--VELMPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
I +EL +L D + +P L + + A + +P T+VPGRN IFL
Sbjct: 74 ILNIELDAIGGSALTGDELEVPKDNLSPLDSPDGAETDAPGMA-GEVPVTYVPGRNTIFL 132
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTP 171
+AA+ A LG +I IGV D+SGYPDCR D + A+ A+NLG + + P
Sbjct: 133 AYAASWAEVLGARDIFIGVNAVDFSGYPDCRPDYLEALAAALNLGSQCGREGRPFRLQAP 192
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ L K E +G + +H+CY + R C C AC LR++G+
Sbjct: 193 LLHLSKAEIIAKGLALG------VDYARTHSCYDPDQQHR-----ACGRCDACILRRRGF 241
>gi|320108725|ref|YP_004184315.1| exsB protein [Terriglobus saanensis SP1PR4]
gi|319927246|gb|ADV84321.1| exsB protein [Terriglobus saanensis SP1PR4]
Length = 236
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 106/238 (44%), Gaps = 35/238 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++ SGG DS+ C + A FD V L F YGQR + L + + E
Sbjct: 17 AVICLSGGMDSTVCATLASRDFD-VYALHFSYGQRTEAR---ELASARAVAEY------- 65
Query: 71 LGEDHILPLA--ILGDISHSSLTKN---VAMKIQD-----NNLPNTFVPGRNIIFLVFAA 120
+G LPL + I S+LT V +D + +P T+VP RN FL A
Sbjct: 66 IGAKEFLPLRMDLFRQIGGSALTDTSIAVPNAPEDEATIGHEVPVTYVPFRNAHFLSAAV 125
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYE 179
+ A LG + IG E D SGYPDCR A I G E ++ V TPL+ LKK E
Sbjct: 126 SWAEVLGAPTVSIGAVEQDSSGYPDCRPAYYDAFNALIQQGTKEGNIRVITPLIHLKKAE 185
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+L ++ + L S +CY G+ C C +C LR + + E EK
Sbjct: 186 IVRLGVEL------HAPLHVSWSCYSGEEK-------ACGVCESCSLRLRAFKEAGEK 230
>gi|285019179|ref|YP_003376890.1| transcriptional regulator, exsb family protein [Xanthomonas
albilineans GPE PC73]
gi|283474397|emb|CBA16898.1| putative transcriptional regulator, exsb family protein
[Xanthomonas albilineans]
Length = 221
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS+ ++ A + V LS YGQR+ EL+ V + + K
Sbjct: 3 NAVVLLSGGMDSAVVVAIARAQGYAVHALSVRYGQRHTSELDAAARVASALNVVAHK--- 59
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++ D L I S+LT ++ + + +P T+VP RN I L A A LG
Sbjct: 60 TVNVD-------LRSIGGSALTDDIEVPDAGGSGIPVTYVPARNTIMLSVALGWAEVLGA 112
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I GV DYSGYPDCR + I A +T N+ ++ V VH PL + K + +
Sbjct: 113 ADIFCGVNAVDYSGYPDCRPEFIDAFQTLANIATKAGVEGAGLRVHAPLQQMSKADIVRE 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G V+ L S CY + G C C AC LR G+ E
Sbjct: 173 GVRLG----VDFGLTVS--CY-----RADAAGRACGHCDACRLRAAGFAE 211
>gi|148546498|ref|YP_001266600.1| exsB protein [Pseudomonas putida F1]
gi|189038936|sp|A5VZV6|QUEC_PSEP1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148510556|gb|ABQ77416.1| exsB protein [Pseudomonas putida F1]
Length = 224
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL V +
Sbjct: 6 AVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVAHDL---------G 56
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A L
Sbjct: 57 VVEHKVIGLNLDG-IGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVLEA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL + K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY D R C C +C LR G+
Sbjct: 176 GMARG----VDYSLTVS--CYQADDDGR-----ACGKCDSCRLRADGF 212
>gi|220910546|ref|YP_002485857.1| exsB protein [Cyanothece sp. PCC 7425]
gi|254764328|sp|B8HQ99|QUEC_CYAP4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|219867157|gb|ACL47496.1| exsB protein [Cyanothece sp. PCC 7425]
Length = 229
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 107/239 (44%), Gaps = 36/239 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKKIVEL- 63
++L SGG DS+T L A LSF+YGQR+K EL + ++ +++
Sbjct: 4 VILLSGGLDSTTVLYLARSLGHDCYALSFNYGQRHKQELAAAIAVAQLAGVIQHQVISFD 63
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W S D+ L L +N A K +P T+VP RN IFL FA + A
Sbjct: 64 LGLWGGSALTDYTL-----------DLPQNRAFKEMAEQIPITYVPARNTIFLSFALSYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKY 178
+G T + G+ DYSGYPDCR D I A++ LG + + + TPL+ L K
Sbjct: 113 EAIGATQVYAGMNAIDYSGYPDCRPDYIAAMQEVYRLGTKQGREGEPIQIITPLIDLTKP 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYL--GKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+L +G + ++ +CY G D C C +C LR + E
Sbjct: 173 AIIQLGNRLG------VPWAKTWSCYSDGGGNDPP----VACGVCDSCRLRLAAFAELS 221
>gi|33241304|ref|NP_876246.1| PP-loop superfamily ATPase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|81663872|sp|Q7V9H8|QUEC_PROMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33238834|gb|AAQ00899.1| Predicted PP-loop superfamily ATPase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 227
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 30/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+++ P + L SGG DS+T + A+++ V LSFDYGQR+K ELE + +
Sbjct: 3 LEERPKTIALLSGGLDSATATAIAIEQGHNVIGLSFDYGQRHKRELEAAKLLANHL---- 58
Query: 65 PKWKDSLGEDHILP--LAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAAT 121
L E HI+ L+ G S + L +++ + +PNT+VPGRN +F+ +
Sbjct: 59 -----KLIEHHIIDINLSTWGGSSLTDLNESIPKTGVLPGVIPNTYVPGRNTVFIAIGLS 113
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLK 176
LA +V+G+ DYSGYPDCR D + + NL G E + + + PL+
Sbjct: 114 LAEARNAKQLVLGINAMDYSGYPDCRPDYLDEFQKLANLASKAGREGNGIKLLAPLIH-- 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
W Q + +++ ++ + +CY G ++ C C +C +R + +
Sbjct: 172 ----WNKIQIVQEALRLDIPIDLTWSCYNGDTEE-------CGLCDSCRIRNEALQSVR 219
>gi|158335496|ref|YP_001516668.1| ExsB protein [Acaryochloris marina MBIC11017]
gi|189038885|sp|B0C253|QUEC_ACAM1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|158305737|gb|ABW27354.1| ExsB protein [Acaryochloris marina MBIC11017]
Length = 228
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-------RKKIVEL 63
A++L SGG DSST L A +SFDY QR++ EL+ + + + +IV
Sbjct: 3 AVVLLSGGLDSSTALYKAKADGADCYAISFDYRQRHRQELDSAVAIAQSAQVTQHQIVAF 62
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ W S D + D+ S+ + +++P T+VP RN IFL FA
Sbjct: 63 DLTLWGGSALTDTQI------DLPSRSIEEMA------DHIPVTYVPARNSIFLSFALAY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
A + + IGV + DYSGYPDCR D I+A++ LG + + + TPL+ L K
Sbjct: 111 AETISAEQVYIGVNQLDYSGYPDCRPDFIQAMQEVFRLGTKLGREGQAIEICTPLINLHK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+L D+G + E++ +CY D C C +C LR + +
Sbjct: 171 SAIIELGNDLG------VPWEQTWSCY---SDGGGSPPLACGQCDSCQLRLAAFAQL 218
>gi|257091669|ref|YP_003165310.1| exsB protein [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257044193|gb|ACV33381.1| exsB protein [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 233
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A LS DYGQR+ R ++ +
Sbjct: 13 AVVLLSGGLDSATTLAIARADGFACHCLSIDYGQRH----------RAELAAAALLAEAL 62
Query: 71 LGEDHI---LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+H L L + G + + V + + +P T+VP RN + L A A LG
Sbjct: 63 GAREHRQLRLTLEVFGGSALTDERIAVPVDGVHSGIPITYVPARNTVMLSLALAWAEVLG 122
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I +GV DYSGYPDCR + I A E NL + V T+H PLM L K E +
Sbjct: 123 SRDIFVGVNAVDYSGYPDCRPEYIAAYEKMANLATRAAVQGASLTIHAPLMGLGKAEIIQ 182
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY RD R C C +C LR+ G+
Sbjct: 183 RGITLG----VDYGLTVS--CYQADRDGR-----ACGVCDSCRLRRAGF 220
>gi|87301705|ref|ZP_01084545.1| ExsB [Synechococcus sp. WH 5701]
gi|87283922|gb|EAQ75876.1| ExsB [Synechococcus sp. WH 5701]
Length = 243
Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 22/229 (9%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D AP A+ L SGG DS+T + A++ RV LSFDYGQR++ ELE + +
Sbjct: 15 DPGSPAPLAVALLSGGLDSATAAALAIEAGYRVIGLSFDYGQRHRQELEAAALLASVL-- 72
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMK---IQDNNLPNTFVPGRNIIFLVF 118
L E H + L L S+LT ++A+ + + +P T+VPGRN +F+
Sbjct: 73 -------GLIEHHTIALN-LAAWGGSALTDPDIALPGAGVVEGVIPPTYVPGRNTVFIAL 124
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
+LA G + +V+GV DYSGYPDCR D + A ++ +L ++ +W
Sbjct: 125 GLSLAEARGASRLVLGVNAVDYSGYPDCRPDYLAAFQSLADLASKAGREGQGAQLW-APL 183
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+W + + + L +E + +CY G C C +C +R
Sbjct: 184 LSWSKTRIVEEALRLRLPIERTWSCYAGGTVP-------CGRCDSCRIR 225
>gi|282898901|ref|ZP_06306885.1| ExsB [Cylindrospermopsis raciborskii CS-505]
gi|281196212|gb|EFA71125.1| ExsB [Cylindrospermopsis raciborskii CS-505]
Length = 222
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 108/241 (44%), Gaps = 44/241 (18%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE--TLSFDYGQRNKVELECRLCV--------RKKI 60
A++L SGG DSST L A R D E +SFDY QR++ EL+ + + +++
Sbjct: 3 AVILLSGGLDSSTVLYQA--RADGYECYAISFDYHQRHRRELQSAMSIAQSLGVVEHQQV 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ W S D+ +P+ N + ++P T+VP RN IFL F
Sbjct: 61 TFDLRSWGGSALTDNSIPVP-----------HNRPLDQMSESIPITYVPARNTIFLSFGL 109
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWL 175
A + + IGV DYSGYPDCR D I A++ LG + + + PL+ L
Sbjct: 110 AYAEAIRAERVYIGVNALDYSGYPDCRPDYIHAMQEVFRLGTKQGREGKPIDIIAPLINL 169
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + +L +G + E + +CY G + C C +C LR W F
Sbjct: 170 TKTQIIQLGNRLG------VPWELTWSCYSGGE-------HPCGVCDSCQLR---WAAFH 213
Query: 236 E 236
E
Sbjct: 214 E 214
>gi|307150182|ref|YP_003885566.1| exsB protein [Cyanothece sp. PCC 7822]
gi|306980410|gb|ADN12291.1| exsB protein [Cyanothece sp. PCC 7822]
Length = 227
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 32/234 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+T + AL V LS YGQR++ EL+ KK+V +
Sbjct: 4 PLAVVLLSGGLDSATSAAIALADGYEVIALSLSYGQRHQRELQAA----KKVVAALDI-- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ H + L SSLT + ++ N +PNT+VPGRN +F+ A +LA
Sbjct: 58 ----KSHYIMDVNLSQWGGSSLTDELIDMPTDGVKPNLIPNTYVPGRNTVFIAIALSLAE 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
G I +G+ DYSGYPDCR + I A + +L G+E + + PL+ K +
Sbjct: 114 AKGAEAIYLGINAVDYSGYPDCRPEYIEAFQKLASLSSKVGVEGKAIQLMAPLVKDSKAD 173
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A + + + ++ +CY G + C C +C +R + +E
Sbjct: 174 IVRRAMSL------EVPIADTWSCYQGGDEP-------CGLCDSCRIRNRALIE 214
>gi|22299275|ref|NP_682522.1| transcription regulator ExsB-like protein [Thermosynechococcus
elongatus BP-1]
gi|81742784|sp|Q8DI59|QUEC_THEEB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|22295458|dbj|BAC09284.1| tlr1732 [Thermosynechococcus elongatus BP-1]
Length = 233
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 107/236 (45%), Gaps = 35/236 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L A LSFDYGQR++ ELE + +
Sbjct: 7 AVVLLSGGLDSSTVLFRAKALGYACYALSFDYGQRHRRELEAAIAIATSA---------G 57
Query: 71 LGEDHILPL-------AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ E ILPL + L D+S L ++ + +P T+VP RN IFL A A
Sbjct: 58 VVEHQILPLNLRLWGGSALTDLS-IDLPRDRDLATMSQEIPVTYVPARNTIFLSVALAYA 116
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
L ++ IGV DYSGYPDCR D I A++ LG + + + TPL+ L K
Sbjct: 117 EALEARSVHIGVNALDYSGYPDCRPDYIAAMQEVYRLGTKQGREGQPIEIVTPLIDLHKT 176
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ +L G + E++ +CY + C C AC LR + E
Sbjct: 177 DIIRLGHGYG------VPWEKTWSCYSDGQQ-------ACGRCDACRLRLAAFAEL 219
>gi|170723150|ref|YP_001750838.1| exsB protein [Pseudomonas putida W619]
gi|254764369|sp|B1JD61|QUEC_PSEPW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169761153|gb|ACA74469.1| exsB protein [Pseudomonas putida W619]
Length = 224
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL V + +
Sbjct: 6 AVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDL---------G 56
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A L
Sbjct: 57 VVEHKVIGLNLDG-IGGSALTDSSIDVPETPGEGIPVTYVPARNTVFLSLALGWAEVLQA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL + K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY + R C C +C LR G+
Sbjct: 176 GMARG----VDYSLTVS--CYQADDEGR-----ACGKCDSCRLRADGF 212
>gi|224372822|ref|YP_002607194.1| ExsB protein [Nautilia profundicola AmH]
gi|254764361|sp|B9L986|QUEC_NAUPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|223588633|gb|ACM92369.1| ExsB protein [Nautilia profundicola AmH]
Length = 222
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 26/226 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++ SGG DS+T A + + F+Y QR + + L I + + +
Sbjct: 4 AVVILSGGMDSTTAAFIAKSEGYEIIPVHFNYSQRTE---KRELKAFNDICDYL-----N 55
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L +I+ + I S+L +N+ + + +P T+VP RN IFL AA +A + G
Sbjct: 56 LDNRYIIDIPFFKQIGASALVDENIDVPVDGVKPGIPVTYVPFRNGIFLSIAAAVAEKEG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQ 185
I IGV E D SGYPDC D I+ ++ A+N G E+++ + TPL+ LKK + K A
Sbjct: 116 AEAIYIGVVEEDSSGYPDCTEDFIQNMQKAVNSGTKPETNIEIKTPLVHLKKEDIVKTAV 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
N+ L + +CY + + C C +C LR KG+
Sbjct: 176 K------YNVPLHLTWSCYKNEDE-------ACGVCDSCRLRLKGF 208
>gi|320103234|ref|YP_004178825.1| preQ(0) biosynthesis protein QueC [Isosphaera pallida ATCC 43644]
gi|319750516|gb|ADV62276.1| preQ(0) biosynthesis protein QueC [Isosphaera pallida ATCC 43644]
Length = 246
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI---------VE 62
++L SGG DS+T L+ A+ ++ L+ YGQR+++E E V + V+
Sbjct: 20 VVLLSGGLDSTTVLAEAVSKYSMPHALTIHYGQRHQIEREAARRVARAFNVVRHVELEVD 79
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L + +L +D L + D S + + + + P T+VP RN IFL A
Sbjct: 80 LRAFGRSALTDD----LEVPKDRSDTEIARGI---------PITYVPARNTIFLSLALAF 126
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLK 176
A +G T++ +GV DYSGYPDCR + +RA E NL + V VH P +
Sbjct: 127 AESIGSTDLFVGVNCVDYSGYPDCRPEYLRAFEALANLATKVGVEGTGRFRVHAPFLHAT 186
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + + ++G V+ L +H+CY + G C C +C LR + +
Sbjct: 187 KADIIRRGLELG----VDYSL--THSCY-----DPDDQGRACGRCDSCRLRLAAFRQ 232
>gi|209527869|ref|ZP_03276358.1| exsB protein [Arthrospira maxima CS-328]
gi|209491672|gb|EDZ92038.1| exsB protein [Arthrospira maxima CS-328]
Length = 226
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-------KVELECRLCVRKKIVEL 63
A++L SGG DSST L A LSF+Y QR+ E ++VE
Sbjct: 3 AVILLSGGLDSSTVLYQAKADGCECYALSFNYQQRHLRELEAAAKIAEAAGVAAHQVVEF 62
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +W S DH + L ++ S T +P T+VP RN IFL A
Sbjct: 63 DLKRWGGSALTDHNIDLPCDRTLAEMSAT-----------IPITYVPARNTIFLSLALAY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
+G I IGV DYSGYPDCR D I A+++ LG + + +T++TPL+ LKK
Sbjct: 112 GETIGADRIYIGVNALDYSGYPDCRPDYIAAMQSVFRLGTKQGREGNAITINTPLIDLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ +L +G + E + +CY G+ C C AC LR
Sbjct: 172 TDIIQLGNSLG------VPWEYTWSCYGGEAQ-------ACGVCDACRLR 208
>gi|269836354|ref|YP_003318582.1| exsB protein [Sphaerobacter thermophilus DSM 20745]
gi|269785617|gb|ACZ37760.1| exsB protein [Sphaerobacter thermophilus DSM 20745]
Length = 230
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + P A++L SGG DS+T A + LSFDYGQR++ EL+ V + +
Sbjct: 1 MQAQANERPGAVVLLSGGVDSTTVAYLARASGYAIYALSFDYGQRHRRELDAAAAVARAV 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVF 118
+ H + L I SSLT + + + +P+T+VP RN IFL
Sbjct: 61 EAVE----------HRVVRIDLAGIGGSSLTGHGEIPTGGVTDGIPSTWVPARNHIFLAV 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPL 172
A+ A +G I IGV + DYSGYPDCR + + A + A +L + V V PL
Sbjct: 111 ASGYAEVVGARAIYIGVSQVDYSGYPDCRAEFLEAYQRAADLASKQFVEEGRSIPVVAPL 170
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ L K T +L +G V+ L S CY G C C +C LR
Sbjct: 171 LHLSKAGTVRLGLALG----VDYGLTWS--CYQGGESP-------CGVCDSCRLR 212
>gi|299067716|emb|CBJ38925.1| queuosine biosynthesis protein [Ralstonia solanacearum CMR15]
Length = 224
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 39/234 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKKIVEL 63
A++L SGG DS+T L+ A + LS YGQR+ ELE VR +IV+L
Sbjct: 5 AIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHEIVDL 64
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ S D L + G +Q+ +P T+VP RN I L A
Sbjct: 65 DLRRFGGSALTDDALDVPTTG--------------VQEG-IPITYVPARNTIMLSLALGW 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKK 177
A +G ++ G DYSGYPDCR + + A ET NL ++ H+ V+ P++ + K
Sbjct: 110 AEAVGARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDHIRVNAPIIAMTK 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +G V+ L S CY + G C C +C +R+ G+
Sbjct: 170 AEIIQAGARLG----VDYSLTVS--CYQAD-----DAGRACGVCDSCRIRRAGF 212
>gi|223039865|ref|ZP_03610149.1| ExsB protein [Campylobacter rectus RM3267]
gi|222878874|gb|EEF13971.1| ExsB protein [Campylobacter rectus RM3267]
Length = 223
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 111/232 (47%), Gaps = 26/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ C A + L FDYGQR +E ++I E + K
Sbjct: 4 AVCIMSGGMDSTLCAVLAKRAGYEIVALHFDYGQRT---MEREKLAFEQICERIGALKKV 60
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ H + I ++LT +N+A++ + P+T+VP RN IF+ AA LA + G
Sbjct: 61 NLDAHFI-----ASIGGNALTDENLAIRKDGAKPDTPSTYVPFRNGIFISIAAALAEKEG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKYETWKLAQ 185
+ IG+ E D SGYPDC D I IE+A+N G + + TPL+ L K + +
Sbjct: 116 AQALYIGIVEEDGSGYPDCTADFIAKIESAVNAGTSKDFSLRIETPLVNLSKAGIVRKSL 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ G LE + +CY + + C C +C LR +G+ EK
Sbjct: 176 EAGSP------LELTWSCYELEDE-------ACGECDSCRLRLRGFELAGEK 214
>gi|226945709|ref|YP_002800782.1| ExsB protein [Azotobacter vinelandii DJ]
gi|259551494|sp|C1DRE9|QUEC_AZOVD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|226720636|gb|ACO79807.1| ExsB protein [Azotobacter vinelandii DJ]
Length = 224
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T + A ++SFDYGQR++ EL V +++ +
Sbjct: 6 AVILLSGGLDSATVAALAKTEGYACYSMSFDYGQRHRAELRAAERVARQLGMV------- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYRLG 127
+H + LG I S+LT + A+ + ++ +P T+VP RN +FL A A LG
Sbjct: 59 ---EHKVIGLDLGGIGGSALT-DPAIAVPESPCEGIPVTYVPARNTVFLALALGWAEVLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR I A E NL ++ V + PL L K E +
Sbjct: 115 ARDIFIGVNAVDYSGYPDCRPAFIEAFERMANLATKAGVEGQGFRIRAPLQNLGKDEIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY E G C C +C LR G+
Sbjct: 175 AGLRHG----VDYGLTVS--CYQAD-----EEGRACGRCDSCRLRAAGF 212
>gi|17545457|ref|NP_518859.1| signal peptide protein [Ralstonia solanacearum GMI1000]
gi|81506162|sp|Q8Y1F2|QUEC_RALSO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|17427749|emb|CAD14268.1| hypothetical signal peptide protein [Ralstonia solanacearum
GMI1000]
Length = 224
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 39/234 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKKIVEL 63
A++L SGG DS+T L+ A + LS YGQR+ ELE VR +IV+L
Sbjct: 5 AIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHEIVDL 64
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ S D L + G +Q+ +P T+VP RN I L A
Sbjct: 65 DLRRFGGSALTDDALEVPTTG--------------VQEG-IPITYVPARNTIMLSLALGW 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKK 177
A +G ++ G DYSGYPDCR + + A ET NL ++ H+ V+ P++ + K
Sbjct: 110 AEAVGARDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDHIRVNAPIIAMTK 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +G V+ L S CY + R C C +C +R+ G+
Sbjct: 170 AEIIQAGARLG----VDYSLTVS--CYQADDEGR-----ACGVCDSCRIRRAGF 212
>gi|325274587|ref|ZP_08140643.1| exsB protein [Pseudomonas sp. TJI-51]
gi|324100229|gb|EGB98019.1| exsB protein [Pseudomonas sp. TJI-51]
Length = 224
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T ++ A T+SFDYGQR++ EL V + +
Sbjct: 6 AVILLSGGLDSATVVAMAKADGYSCYTMSFDYGQRHRAELNAAARVARDL---------G 56
Query: 71 LGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A L
Sbjct: 57 VVEHKVIGLNLDG-IGGSALTDSSIDVPETPGEGIPVTYVPARNTVFLSLALGWAEVLEA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + + A E NL ++ V + PL + K + +
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G V+ L S CY + R C C +C LR G+
Sbjct: 176 GMARG----VDYSLTVS--CYQADDEGR-----ACGKCDSCRLRADGF 212
>gi|254282794|ref|ZP_04957762.1| exsB protein [gamma proteobacterium NOR51-B]
gi|219678997|gb|EED35346.1| exsB protein [gamma proteobacterium NOR51-B]
Length = 224
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 109/230 (47%), Gaps = 28/230 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LSFDYGQR++ EL+ V +
Sbjct: 6 AVVLVSGGLDSATVLAMAAAAGRQCFALSFDYGQRHRAELKAAAHVASSVP--------- 56
Query: 71 LGEDHILPLAILGDISHSSLT-KNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLGI 128
G H + L I S+LT ++A+ +P T+VP RN +FL A A L
Sbjct: 57 -GTVHKVVQLDLSTIGGSALTDTSIAVPTSPTEGIPVTYVPARNTVFLSIALGWAEVLDA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESH-VTVHTPLMWLKKYETWKL 183
I IGV DYSGYPDCR I A + A G+E H + V TP++ + K + +
Sbjct: 116 DEIHIGVNAVDYSGYPDCRPAFIDAFRSLAAVATKAGVEGHPLAVCTPIIDMTKGDIIRA 175
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
++G V+ L S CY + G C C +C LR+ G+ E
Sbjct: 176 GTELG----VDYALTVS--CYQPDGE-----GLACGRCDSCRLRRAGFRE 214
>gi|77386124|gb|ABA77541.1| putative transcriptional regulatory protein [Campylobacter jejuni]
Length = 224
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 119/240 (49%), Gaps = 34/240 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKD 69
AL + SGG DS+ C A + L FDY R + E EC K+I + +
Sbjct: 5 ALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEPRTQEKERECF----KQICKAL----- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL------PNTFVPGRNIIFLVFAATLA 123
+ + +IL ++ + DI ++LT + ++ I N L P T+VP RN IFL A +LA
Sbjct: 56 KVEKSYILDVSFIKDIGGNALT-DKSIDIPKNELCISDTPPITYVPFRNGIFLSIAGSLA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETW 181
+ +I IGV E D SGYPDC + I+ + IN G + V+ TPL+ L K +
Sbjct: 115 EKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVYIKTPLVRLNKAKIV 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME--FKEKYQ 239
+LA N+ LE + +CY + + C C +C LR +G+ + FK+K +
Sbjct: 175 ELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKVGFKDKIK 221
>gi|152996127|ref|YP_001340962.1| exsB protein [Marinomonas sp. MWYL1]
gi|189038923|sp|A6VX48|QUEC_MARMS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|150837051|gb|ABR71027.1| exsB protein [Marinomonas sp. MWYL1]
Length = 219
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 37/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-----CR-LCVRKKIVELM 64
A++++SGG DS T L+ A+ V LSF+YGQ++ ELE CR L + K+V++
Sbjct: 5 AVVVYSGGMDSFTVLNTAIQNGLDVYALSFNYGQKHSKELEVAAHVCRKLGISHKVVDIT 64
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAAT 121
AI +++SSLT + + +D+N+ +T VP RN++ L A
Sbjct: 65 ---------------AINSLMANSSLTGDAEIPEGHYEDDNMKSTVVPNRNMVLLSMAIA 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A L + G D+ YPDCR + + A+ + V + TP + K E
Sbjct: 110 YAVSLEAGKVYYGAHSGDHHIYPDCRPEFVEAMNAVSKIANYQSVEIVTPFLHSSKGEIL 169
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K D+ NL + TCY G+ C C ACY R + + E
Sbjct: 170 KAGLDM------NLNYANTWTCYNGREKS-------CGKCGACYERLEAFAE 208
>gi|187940192|gb|ACD39320.1| hypothetical protein PACL_0661 [Pseudomonas aeruginosa]
Length = 222
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLC 55
+++ K+ ++L SGG DS+ CL A R V +L Y Q + VEL+ R
Sbjct: 9 HEVEKEKRKIVVLHSGGLDSTVCLLLAHSRGHEVVSLGVSYNQHHHVELDYAAAQCARYG 68
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
+ +KIV + W ++P KN +M + + F+PGRN IF
Sbjct: 69 IERKIVSVA--WSKPA---RVIP-------------KNRSMAEIKKGVSSAFLPGRNGIF 110
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
L+ A+ A +G + G+ D+SGYPDCR + I + ++ + + PL
Sbjct: 111 LMLASAEAAGIGADEVWTGINSVDFSGYPDCRPEFIESFRKMLSYAIPKGPKLSAPLQKK 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY-GCNSCPACYLRQKGWMEF 234
K + KLA +G Q ++ +CY R K E G+ C +C AC L + W
Sbjct: 171 SKPQIAKLAHRLGLQR------HDTWSCY---RPKIAEAGFVPCGACDACKLHEFAWQGI 221
Query: 235 K 235
K
Sbjct: 222 K 222
>gi|88604066|ref|YP_504244.1| ExsB [Methanospirillum hungatei JF-1]
gi|110816233|sp|Q2FS65|QUEC_METHJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|88189528|gb|ABD42525.1| preQ(0) biosynthesis protein QueC [Methanospirillum hungatei JF-1]
Length = 220
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELEC--RLCVRKKIVELMPKW 67
A+ L SGG DSST A + L F YGQR + E EC R+ +E +
Sbjct: 3 AVCLLSGGMDSSTLACLAKHDGYDILALHFSYGQRTEEKERECAKRIARHLNALEFLE-- 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATL 122
+ L L + SSLT + AM+++ + +P+T+VP RN L A +
Sbjct: 61 ---------VDLTYLKAVGASSLT-DYAMQVKAHEDAGDGIPDTYVPFRNANLLSVATSF 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
A G I IGV +DYSGYPDCR + I A + I LG ++ + + TP + L K E
Sbjct: 111 AEARGADAIYIGVQASDYSGYPDCRPEFIDAFQKVITLGTRPDAGIILKTPFVKLNKAEI 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K+ D+ N+ E++ +CY E C C +C+ R + + +
Sbjct: 171 LKIGMDL------NVPYEDTWSCYA-------ENEVACGICGSCHYRLEAFRQ 210
>gi|148240805|ref|YP_001226192.1| PP-loop superfamily ATPase [Synechococcus sp. WH 7803]
gi|189029541|sp|A5GPN0|QUEC_SYNPW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|147849344|emb|CAK24895.1| Predicted PP-loop superfamily ATPase [Synechococcus sp. WH 7803]
Length = 229
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 22/222 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + A + RV LSFDYGQR++ R+
Sbjct: 8 TAIALLSGGLDSATAAALAQEAGCRVIGLSFDYGQRHR---------RELQAAAAIAEAL 58
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L E H + + L SSLT + +QD +P+T+VPGRN +F+ +LA
Sbjct: 59 NLAEHHTISVN-LASWGGSSLTDSAQALPVDGVQDGVIPSTYVPGRNTVFISIGLSLAEA 117
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G +V+GV DYSGYPDCR D + A +T +L + P +W E W +
Sbjct: 118 RGADRLVLGVNAVDYSGYPDCRPDYLDAFQTLADLSSKVGREGRGPRLWAPLVE-WSKQK 176
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ + + +E S +CY G + C C +C +R
Sbjct: 177 IVEEALRLGVPIERSWSCYSGGD-------HPCGVCDSCRIR 211
>gi|254432181|ref|ZP_05045884.1| exsB protein [Cyanobium sp. PCC 7001]
gi|197626634|gb|EDY39193.1| exsB protein [Cyanobium sp. PCC 7001]
Length = 225
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 22/229 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P+ + L SGG DS+T + A++ RV LSFDYGQR++ EL + +
Sbjct: 6 PTTIALLSGGLDSATAAALAIEAGHRVIGLSFDYGQRHRRELLAANAIAGAL-------- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN----LPNTFVPGRNIIFLVFAATLAY 124
+L E H + + L S+LT QD +P+T+VPGRN +F+ +LA
Sbjct: 58 -NLAEHHTIAVN-LAAWGGSALTDPALPVPQDGTAEGVIPSTYVPGRNTVFIALGLSLAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G +V+GV DYSGYPDCR D + A +T +L ++ +W + W
Sbjct: 116 ARGAGRLVLGVNAVDYSGYPDCRPDYLEAFQTLADLASKAGREGRGVRLWAPLVQ-WSKT 174
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + + + + +CY G C C +C +R +E
Sbjct: 175 RIVTEALRLGVPIASTSSCYSGGDRP-------CGVCDSCRIRDAALIE 216
>gi|15604537|ref|NP_221055.1| hypothetical protein RP694 [Rickettsia prowazekii str. Madrid E]
gi|81554792|sp|Q9ZCM9|QUEC_RICPR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|3861231|emb|CAA15131.1| unknown [Rickettsia prowazekii]
Length = 227
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS+T L+ A + + +SF+YGQRN EL +K+ EL+ K+ +
Sbjct: 7 LLSGGTDSATVLAIASEMCYEIYAMSFNYGQRNNAEL-------RKVKELIKKYNVKQHK 59
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPN----TFVPGRNIIFLVFAATLAYRLGIT 129
+ L G + + +V N LP T+VP RN IFL +A A +G
Sbjct: 60 IVDIDLRAFGGSALTDDNIDVPYYHGINALPEIVPVTYVPARNTIFLSYAVGFAEVIGSQ 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLA 184
+I IGV +D + YPDC + I++ E +NL +T+H PL+ + K + +
Sbjct: 120 DIFIGVHTSDSANYPDCCPEYIQSFEKMVNLATNMGVQGKKITIHAPLIDMTKEQIIRTG 179
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ G D N I +CY D C +C AC +R +
Sbjct: 180 LKL-GVDYKNTI-----SCYSPTEDD-----LSCGNCLACIIRLDAF 215
>gi|292572327|gb|ADE30242.1| Trans-regulatory protein ExsB [Rickettsia prowazekii Rp22]
Length = 236
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS+T L+ A + + +SF+YGQRN EL +K+ EL+ K+ +
Sbjct: 16 LLSGGTDSATVLAIASEMCYEIYAMSFNYGQRNNAEL-------RKVKELIKKYNVKQHK 68
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPN----TFVPGRNIIFLVFAATLAYRLGIT 129
+ L G + + +V N LP T+VP RN IFL +A A +G
Sbjct: 69 IVDIDLRAFGGSALTDDNIDVPYYHGINALPEIVPVTYVPARNTIFLSYAVGFAEVIGSQ 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLA 184
+I IGV +D + YPDC + I++ E +NL +T+H PL+ + K + +
Sbjct: 129 DIFIGVHTSDSANYPDCCPEYIQSFEKMVNLATNMGVQGKKITIHAPLIDMTKEQIIRTG 188
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ G D N I +CY D C +C AC +R +
Sbjct: 189 LKL-GVDYKNTI-----SCYSPTEDD-----LSCGNCLACIIRLDAF 224
>gi|15892993|ref|NP_360707.1| trans-regulatory protein ExsB [Rickettsia conorii str. Malish 7]
gi|81527957|sp|Q92GQ2|QUEC_RICCN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|15620191|gb|AAL03608.1| trans-regulatory protein ExsB [Rickettsia conorii str. Malish 7]
Length = 228
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 31/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+ + +
Sbjct: 5 AVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKDY--N 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM-KIQD-----NNLPNTFVPGRNIIFLVFAATLAY 124
+ + ++ + + I + N+ + K Q+ +++P T+VP RN IFL +A +A
Sbjct: 56 VKQHRVINIDLQSFIGSALTDDNIDVPKFQNTDQLPSDIPVTYVPARNTIFLSYALGVAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
+G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ + K +
Sbjct: 116 VIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTKEQ 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++G + ++ +CY D G C C +C R +
Sbjct: 176 IIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAF 216
>gi|332188916|ref|ZP_08390619.1| exsB family protein [Sphingomonas sp. S17]
gi|332011056|gb|EGI53158.1| exsB family protein [Sphingomonas sp. S17]
Length = 231
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ AP A++L SGG DS + A R+ LS DY QR+KVEL V
Sbjct: 1 MTSSAPMAVVLVSGGLDSMISAASAKAAGYRILALSVDYNQRHKVELAAARRVAVA---- 56
Query: 64 MPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAA 120
E HI LPL L S+LT ++ + +P T+VP RN IFL A
Sbjct: 57 ------LGAERHIVLPLD-LSAFGGSALTADIDVPKDGVQPGIPVTYVPARNTIFLSLAL 109
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI----ETAINLGMESH-VTVHTPLMWL 175
A G ++ IGV DYSGYPDCR + + A E A G+E +H PL +
Sbjct: 110 GWAEAAGARDLFIGVNALDYSGYPDCRPEFVAAFEGLAEIATKAGVEGQPFKIHAPLQHM 169
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + + +G V++ L S +CY G C C +C LR KG+ E
Sbjct: 170 TKADIVREGTRLG----VDMGL--SWSCY-----DPAPGGLHCGRCDSCRLRSKGFEE 216
>gi|225873461|ref|YP_002754920.1| exsB protein [Acidobacterium capsulatum ATCC 51196]
gi|254764291|sp|C1F844|QUEC_ACIC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|225791467|gb|ACO31557.1| exsB protein [Acidobacterium capsulatum ATCC 51196]
Length = 229
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 107/239 (44%), Gaps = 31/239 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K A++ SGG DS C + A ++ + F YGQR E R V + V
Sbjct: 1 MTPKRERAVVCLSGGMDSCVCAAIAARDYEPY-AIHFSYGQRT----EARELVSARSVAE 55
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLT-------KNVAMKIQ-DNNLPNTFVPGRNIIF 115
+KD L L + + I S+LT K A + +P T+VP RN F
Sbjct: 56 RLGFKDLLH----LKIDLFRRIGGSALTDTSIDVPKAPAEEAAIGAEIPVTYVPFRNAHF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMW 174
L A + A LG + IVIG E D SGYPDCR A + I G E + V TPL+
Sbjct: 112 LAAAVSWAEVLGASKIVIGAVEQDSSGYPDCRPAYYEAFQHLIETGTKEGSIRVETPLIQ 171
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L+K E +L ++G L+ + +CY G + C C +C LR + + E
Sbjct: 172 LRKREIVRLGLELGAP------LDLTWSCYSGAEE-------ACGECESCVLRLRAFEE 217
>gi|194290404|ref|YP_002006311.1| queuosine biosynthesis protein quec homolog [Cupriavidus
taiwanensis LMG 19424]
gi|254764327|sp|B3R5T4|QUEC_CUPTR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|193224239|emb|CAQ70248.1| queuosine biosynthesis protein QueC putative homolog [Cupriavidus
taiwanensis LMG 19424]
Length = 227
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS YGQR+ ELE K++ + +
Sbjct: 5 AIVLLSGGLDSATVLAMARAQGFETYALSMRYGQRHSSELEAA----KRVAAALGAVRHE 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L L G + + V +P T+VP RN I L A A +G +
Sbjct: 61 IVD---LDLRRFGGSALTDDALEVPTDGASGGIPVTYVPARNTIMLSLALGWAEAVGGRD 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLAQ 185
+ G DYSGYPDCR + + A ET NL ++ V VH P++ + K E +
Sbjct: 118 LFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFRVHAPIIDMTKGEIIRAGI 177
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY D R C C +C +R+ G+
Sbjct: 178 ALG----VDYSLTVS--CYQADDDGR-----ACGVCDSCRIRRAGF 212
>gi|157828917|ref|YP_001495159.1| trans-regulatory protein ExsB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933642|ref|YP_001650431.1| queuosine biosynthesis protein [Rickettsia rickettsii str. Iowa]
gi|167016450|sp|A8GTC6|QUEC_RICRS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189038938|sp|B0BUW5|QUEC_RICRO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157801398|gb|ABV76651.1| trans-regulatory protein ExsB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908729|gb|ABY73025.1| queuosine biosynthesis protein [Rickettsia rickettsii str. Iowa]
Length = 228
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 31/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+ + +
Sbjct: 5 AVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKDY--N 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAY 124
+ + ++ + + I + N+ + N ++P T+VP RN IFL +A +A
Sbjct: 56 VKQHRVINIDLQSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYALGVAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
+G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ + K +
Sbjct: 116 VIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTKEQ 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++G + ++ +CY D G C C +C +R +
Sbjct: 176 IIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIVRLDAF 216
>gi|296272040|ref|YP_003654671.1| exsB protein [Arcobacter nitrofigilis DSM 7299]
gi|296096215|gb|ADG92165.1| exsB protein [Arcobacter nitrofigilis DSM 7299]
Length = 223
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 28/233 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A + + + F+YGQR K EL+ V + +
Sbjct: 5 AICILSGGMDSTLSSYIAKNEGYEIIAIHFNYGQRTEKRELKAFRDVCENL--------- 55
Query: 70 SLGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ + + + I S+LT N+ + I +P T+VP RN IFL AA +A +
Sbjct: 56 NVKNKYEIDIPFFTQIGASALTDANIDVPIDGVKPGVPVTYVPFRNGIFLSIAAAVAEKE 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKLA 184
+ IGV E D SGYPDC I I+ AIN G + +H+++ TPL+ L K E K A
Sbjct: 116 NAEAMFIGVVEEDSSGYPDCTDAFINQIKNAINEGTKEATHISIKTPLVKLHKSEIVKKA 175
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++ N+ LE + +CY +++ C C +C LR G+ + K
Sbjct: 176 LEL------NVPLELTWSCYKEEKE-------ACGVCDSCRLRLNGFAQANSK 215
>gi|113868782|ref|YP_727271.1| PP-loop superfamily ATPase [Ralstonia eutropha H16]
gi|123032775|sp|Q0K7W8|QUEC_RALEH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|113527558|emb|CAJ93903.1| Predicted PP-loop superfamily ATPase [Ralstonia eutropha H16]
Length = 227
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS YGQR+ ELE R+ L +
Sbjct: 5 AIVLLSGGLDSATVLAMARAQGFETYALSMRYGQRHSSELEA---ARRVAAALGATRHEI 61
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ D L S+LT + D + +P T+VP RN I L A A +G
Sbjct: 62 IDLD-------LRRFGGSALTDDALAVPTDGASDGIPVTYVPARNTIMLSLALGWAEAVG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
++ G DYSGYPDCR + + A ET NL ++ V VH P++ + K E +
Sbjct: 115 GRDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFRVHAPIIDMTKGEIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY D R C C +C +R+ G+
Sbjct: 175 AGIALG----VDYSLTVS--CYQADDDGR-----ACGVCDSCRIRRAGF 212
>gi|34581313|ref|ZP_00142793.1| trans-regulatory protein ExsB [Rickettsia sibirica 246]
gi|28262698|gb|EAA26202.1| trans-regulatory protein ExsB [Rickettsia sibirica 246]
Length = 228
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 33/241 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+ + +
Sbjct: 5 AVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKDY--N 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAY 124
+ + ++ + + I + N+ + N ++P T+VP RN IFL +A +A
Sbjct: 56 VKQHRVINIDLRSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYALGVAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
+G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ + K +
Sbjct: 116 VIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTKEQ 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
K ++G + ++ +CY D G C C +C R + K Q
Sbjct: 176 IIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAFK--KNNVQ 222
Query: 240 D 240
D
Sbjct: 223 D 223
>gi|229587053|ref|YP_002845554.1| Trans-regulatory protein ExsB [Rickettsia africae ESF-5]
gi|259551568|sp|C3PLH1|QUEC_RICAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|228022103|gb|ACP53811.1| Trans-regulatory protein ExsB [Rickettsia africae ESF-5]
Length = 228
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 31/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+ + +
Sbjct: 5 AVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKDY--N 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAY 124
+ + ++ + + I + N+ + N ++P T+VP RN IFL +A +A
Sbjct: 56 VKQHRVINIDLQSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYALGVAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
+G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ + K +
Sbjct: 116 VIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTKEQ 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++G + ++ +CY D G C C +C R +
Sbjct: 176 IIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAF 216
>gi|255322577|ref|ZP_05363722.1| ExsB protein [Campylobacter showae RM3277]
gi|255300485|gb|EET79757.1| ExsB protein [Campylobacter showae RM3277]
Length = 223
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ C A + L FDYGQR + K E + + +
Sbjct: 4 AVCIMSGGMDSTLCAVLAKRAGYEIIALHFDYGQRT-------MKREKLAFEQISERIGA 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYRLG 127
L + + L + + I ++LT +D + P T+VP RN IF+ AA LA + G
Sbjct: 57 LKKVN-LDASFIASIGGNALTDESLAIRKDGAKPDTPTTYVPFRNGIFISIAAALAEKEG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWKLAQ 185
+ IG+ E D SGYPDC D I IE+A+N G ++ TPL+ L K + + +
Sbjct: 116 AQALYIGIVEEDGSGYPDCTADFIGKIESAVNAGTSKDFSLRIVTPLVNLSKADIVRKSI 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ G LE + +CY +R+ C C +C LR +G+ EK
Sbjct: 176 EAGSP------LELTWSCY--EREDE-----ACGECDSCRLRLRGFELAGEK 214
>gi|17232587|ref|NP_489135.1| hypothetical protein alr5095 [Nostoc sp. PCC 7120]
gi|81769494|sp|Q8YM45|QUEC_ANASP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|17134233|dbj|BAB76794.1| alr5095 [Nostoc sp. PCC 7120]
Length = 229
Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 39/238 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKKIVEL 63
A++L SGG DSST L A ++SFDY QR++ EL V+ +++
Sbjct: 3 AVILLSGGLDSSTILYQAKADGCECYSISFDYQQRHRRELHSAFLVAQTAGIVQHQVINF 62
Query: 64 -MPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ W S L +D+I L + ++ N+P T+VP RN IFL FA
Sbjct: 63 DLRLWGGSALTDDNI------------DLPQERSLDAMSQNIPVTYVPARNTIFLSFALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLK 176
A + + IGV DYSGYPDCR D I A++ LG + + + PL+ LK
Sbjct: 111 YAEAIAAQRVYIGVNALDYSGYPDCRPDYIEAMQEVFRLGTKQGREGQPINIVAPLINLK 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K E +L +G + + +CY G C C +C LR + E
Sbjct: 171 KTEIIQLGNQLG------VPWNLTWSCYAGGD-------VACGVCDSCRLRLAAFAEL 215
>gi|313682542|ref|YP_004060280.1| preq(0) biosynthesis protein quec [Sulfuricurvum kujiense DSM
16994]
gi|313155402|gb|ADR34080.1| preQ(0) biosynthesis protein QueC [Sulfuricurvum kujiense DSM
16994]
Length = 221
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 107/227 (47%), Gaps = 28/227 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWKD 69
AL + SGG DS+ R + L F+YGQR EL C + K +
Sbjct: 5 ALCIMSGGMDSTLVAYIMRSRGYEIVALHFNYGQRTVAKELSCFREICKDL--------- 55
Query: 70 SLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E + + L I S+LT +V + +P T+VP RN IFL A +A +
Sbjct: 56 GVNEKYEIDLDFFKTIGASALTDHSIDVPTGGIEPGVPITYVPFRNGIFLSIATAIAEKE 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKLA 184
G + I IGV E D SGYPDCR I A A NLG + +++++ PL+ L+K + + A
Sbjct: 116 GCSAIAIGVVEEDSSGYPDCRESFIDAFTKAANLGTKESTNLSIEMPLVRLQKSQIVQEA 175
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++ L + +CY DK C C +C LR +G+
Sbjct: 176 IQL------DVPLHLTWSCY-SSEDK------ACGVCDSCRLRLRGF 209
>gi|207728192|ref|YP_002256586.1| hypothetical protein RSMK04567 [Ralstonia solanacearum MolK2]
gi|206591437|emb|CAQ57049.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 224
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 39/234 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKKIVEL 63
A++L SGG DS+T L+ A + LS YGQR+ ELE VR +IV+L
Sbjct: 5 AIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHEIVDL 64
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ S D L + G +Q+ +P T+VP RN I L A
Sbjct: 65 DLRRFGGSALTDDALDVPTTG--------------VQEG-IPITYVPARNTIMLSLALGW 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
A +G ++ G DYSGYPDCR + + A ET NL ++ V V+ P++ + K
Sbjct: 110 AEAVGARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDRIRVNAPIIAMTK 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +G V+ L S CY + G C C +C +R+ G+
Sbjct: 170 AEIIQAGARLG----VDYSLTVS--CYQAD-----DAGRACGVCDSCRIRRAGF 212
>gi|304437053|ref|ZP_07397016.1| transcription regulator ExsB [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370004|gb|EFM23666.1| transcription regulator ExsB [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 228
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 33/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS TC++ A + +SF+Y QR+ EL+ +
Sbjct: 5 AVILLSGGLDSCTCMAIAHAAGQELYPISFNYHQRHSRELDAAKSIAAHY---------- 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATLAYRL 126
+H++ + I S+LT + Q + ++P T+VP RN+IFL +A A R+
Sbjct: 55 HAAEHLIIETNMDAIGGSALTDSAIDVPQGDAERTDIPVTYVPARNLIFLSYAVGYAERV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYET 180
G ++ IGV DYSGYPDCR I A + A + + + + TPL L K E
Sbjct: 115 GAAHVYIGVNSVDYSGYPDCRPAFIAAFQRAADAATAASAENGRRIVIETPLQHLSKGEI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ D ++ + +CY G C C +C LR +G+ E
Sbjct: 175 IRRG------DALDAPYALTTSCYQG-------GSVACGVCDSCLLRLRGFAE 214
>gi|94311604|ref|YP_584814.1| ExsB [Cupriavidus metallidurans CH34]
gi|110816250|sp|Q1LJY1|QUEC_RALME RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|93355456|gb|ABF09545.1| Queuosine biosynthesis protein queC [Cupriavidus metallidurans
CH34]
Length = 227
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A LS YGQR+ ELE ++ EL K +
Sbjct: 5 AIVLLSGGLDSATVLAMANAAGFETYALSMRYGQRHSSELEA---AKRVAAELGAKRHEI 61
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ D L G + + +V +P T+VP RN I L A A +G +
Sbjct: 62 IDLD----LRRFGGSALTDDALDVPTDGAAGGIPITYVPARNTIMLSLALGWAEAIGGRD 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLAQ 185
+ G DYSGYPDCR + + A ET NL ++ V VH P++ + K E
Sbjct: 118 LFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFHVHAPIIDMTKAEIILAGV 177
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY D R C C +C +R+ G+
Sbjct: 178 KLG----VDYGLTVS--CYKADDDGR-----ACGVCDSCRIRRAGF 212
>gi|167950640|ref|ZP_02537714.1| exsB protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 213
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 17/171 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A++L SGG DS+T L+ A + LS YGQR+ EL+ V + + +
Sbjct: 4 AKRAVVLLSGGLDSATVLAMARQQGFECHALSMLYGQRHAAELDAARQVAQALGAV---- 59
Query: 68 KDSLGEDHILPLAILGDISHSSLT-KNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
DH L L DI S+LT + +A+ K +P T+VP RN +FL A A
Sbjct: 60 ------DHKLINIGLDDIGGSALTDEQIAVPKTPSEGIPPTYVPARNTVFLSLALGWAEV 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTP 171
L +I IGV DYSGYPDCR + I A E NL ++ V +HTP
Sbjct: 114 LEAQDIFIGVNAVDYSGYPDCRPEFIVAFEQLANLATKAGVEGRRIHIHTP 164
>gi|83746168|ref|ZP_00943222.1| Queuosine biosynthesis protein QueC [Ralstonia solanacearum UW551]
gi|207744073|ref|YP_002260465.1| hypothetical protein RSIPO_02259 [Ralstonia solanacearum IPO1609]
gi|83727134|gb|EAP74258.1| Queuosine biosynthesis protein QueC [Ralstonia solanacearum UW551]
gi|206595477|emb|CAQ62404.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 224
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS YGQR+ ELE KK+ + +
Sbjct: 5 AIVLLSGGLDSATVLAMANTQGFETYALSMRYGQRHSSELEAA----KKVAAALGAVRHE 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L L G + + +V +P T+VP RN I L A A +G +
Sbjct: 61 IVD---LDLRRFGGSALTDDALDVPTTGVKEGIPITYVPARNTIMLSLALGWAEAVGARD 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLAQ 185
+ G DYSGYPDCR + + A ET NL ++ V V+ P++ + K E +
Sbjct: 118 LFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDRIRVNAPIIAMTKAEIIQAGA 177
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY + G C C +C +R+ G+
Sbjct: 178 RLG----VDYSLTVS--CYQAD-----DAGRACGVCDSCRIRRAGF 212
>gi|241662344|ref|YP_002980704.1| exsB protein [Ralstonia pickettii 12D]
gi|309780843|ref|ZP_07675584.1| ExsB protein [Ralstonia sp. 5_7_47FAA]
gi|240864371|gb|ACS62032.1| exsB protein [Ralstonia pickettii 12D]
gi|308920525|gb|EFP66181.1| ExsB protein [Ralstonia sp. 5_7_47FAA]
Length = 224
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 106/227 (46%), Gaps = 25/227 (11%)
Query: 11 ALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T L+ A D F+ LS YGQR+ ELE KK+ + +
Sbjct: 5 AIVLLSGGLDSATVLAMANADGFE-TYALSMRYGQRHSSELEAA----KKVAAALGAVRH 59
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + L L G + + +V +P T+VP RN I L A A +G
Sbjct: 60 EIVD---LDLRKFGGSALTDDALDVPTDGAQTGIPITYVPARNTIMLSLALGWAEAVGAR 116
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
++ G DYSGYPDCR + + A ET NL ++ V V+ P++ + K E +
Sbjct: 117 DLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGERIRVNAPIIDMTKAEIIQAG 176
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY K + G C C +C +R+ G+
Sbjct: 177 VRLG----VDYGLTVS--CY-----KADDAGRACGVCDSCRIRKAGF 212
>gi|73540502|ref|YP_295022.1| ExsB [Ralstonia eutropha JMP134]
gi|110816249|sp|Q474K5|QUEC_RALEJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|72117915|gb|AAZ60178.1| ExsB [Ralstonia eutropha JMP134]
Length = 226
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS YGQR+ EL+ V + + + D
Sbjct: 5 AIVLLSGGLDSATVLAMAKAQGFETYALSMRYGQRHSSELDAAKQVASALGAVRHEIVD- 63
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
L L G + + +V + +P T+VP RN I L A A +G +
Sbjct: 64 ------LDLRRFGGSALTDDKLDVPTGGASSGIPITYVPARNTIMLSLALGWAEAVGGRD 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLAQ 185
+ G DYSGYPDCR + + A ET NL ++ V VH P++ + K E +
Sbjct: 118 LFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFHVHAPIIDMTKAEIIRAGI 177
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ + S CY D R C C +C +R+ G+
Sbjct: 178 RLG----VDYSMTVS--CYKADDDGR-----ACGVCDSCRIRRAGF 212
>gi|300704847|ref|YP_003746450.1| queuosine biosynthesis protein [Ralstonia solanacearum CFBP2957]
gi|299072511|emb|CBJ43861.1| queuosine biosynthesis protein [Ralstonia solanacearum CFBP2957]
Length = 224
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L+ A + LS YGQR+ ELE KK+ + +
Sbjct: 5 AIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAA----KKVAAALGAVRHE 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L L G + + +V +P T+VP RN I L A A +G +
Sbjct: 61 IVD---LDLRRFGGSALTDDALDVPTAGVKEGIPITYVPARNTIMLSLALGWAEAVGARD 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLAQ 185
+ G DYSGYPDCR + + A ET NL ++ V V+ P++ + K E +
Sbjct: 118 LFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGERIRVNAPIIAMTKAEIIQAGA 177
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY + G C C +C +R+ G+
Sbjct: 178 RLG----VDYSLTVS--CYQAD-----DEGRACGVCDSCRIRRAGF 212
>gi|238926261|ref|ZP_04658021.1| trans-regulatory protein ExsB [Selenomonas flueggei ATCC 43531]
gi|238885941|gb|EEQ49579.1| trans-regulatory protein ExsB [Selenomonas flueggei ATCC 43531]
Length = 228
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 33/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS TC++ A + +SF+Y QR+ EL+ +
Sbjct: 5 AVILLSGGLDSCTCMAIAHAAGQELYPISFNYHQRHSRELDAARSIAAHY---------- 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATLAYRL 126
+H++ + I S+LT + Q N ++P T+VP RN+IFL +A A R+
Sbjct: 55 HAAEHLIIETNMDAIGGSALTDSAIDVPQGNAERTDIPVTYVPARNLIFLSYALGYAERV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYET 180
G ++ IGV DYSGYPDCR + I A + A + + + + TPL L K E
Sbjct: 115 GAAHVYIGVNSVDYSGYPDCRPEFIAAFQRAADAATAASAEDGRRIVIETPLQHLSKGEI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
I D ++ + +CY G C C +C LR +G+ E
Sbjct: 175 ------ILRGDELDAPYALTTSCYRGGT-------VACGVCDSCLLRLRGFAE 214
>gi|254496018|ref|ZP_05108921.1| ExsB protein [Legionella drancourtii LLAP12]
gi|254354767|gb|EET13399.1| ExsB protein [Legionella drancourtii LLAP12]
Length = 206
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 38 LSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+SF YGQR+ EL + + ++ E I+ L + +S + +M
Sbjct: 14 MSFSYGQRHTAELSAATRIAQHY---------AVKEHKIVTLDT--QLFRNSALTDASMA 62
Query: 98 IQD----NNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRA 153
+ D +P T+VP RN IFL A A +G +I IG DYS YPDCR + I A
Sbjct: 63 VPDFQESAEIPITYVPARNTIFLSMALGFAESIGARDIYIGASSVDYSHYPDCRPEFIAA 122
Query: 154 IETAINLGMESHV-----TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKR 208
+T NL ++ V T+H PL L K +T +L +G V+ L S CY
Sbjct: 123 FQTLANLATKAGVSGDPFTIHAPLQHLSKVKTIELGLSLG----VDYSLTVS--CYQAN- 175
Query: 209 DKRYEWGYGCNSCPACYLRQKGW 231
+ G C C +C R++G+
Sbjct: 176 ----DAGEACGQCDSCTFRKRGF 194
>gi|307352769|ref|YP_003893820.1| exsB protein [Methanoplanus petrolearius DSM 11571]
gi|307156002|gb|ADN35382.1| exsB protein [Methanoplanus petrolearius DSM 11571]
Length = 221
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK- 68
A+ L SGG DS+T A D + L YGQR K E EC +K+ L+ +
Sbjct: 4 AVCLLSGGMDSTTLAYVAKDIGYEILALHTRYGQRTEKKEAECA----RKVASLLGAVEF 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-----NLPNTFVPGRNIIFLVFAATLA 123
+ H+L SSL M++ D+ +PNT+VP RN L A + A
Sbjct: 60 TEISLSHLLAFG------GSSLIDK-GMEVHDHEDLGEGIPNTYVPFRNSNLLSIATSYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
G I IGV +DY+GYPDCR + + A + I+LG ++++T+ TP + L K E
Sbjct: 113 EARGAEAIFIGVQASDYAGYPDCRPEFVEAFQHVIDLGTSDDTNITLMTPFVNLNKTEIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++G + E + +CY G C +C +CY R + +
Sbjct: 173 RRGIELG------VPYEHTWSCYRSN-------GPACGNCDSCYYRLEAF 209
>gi|154150640|ref|YP_001404258.1| exsB protein [Candidatus Methanoregula boonei 6A8]
gi|167016434|sp|A7I7A4|QUEC_METB6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|153999192|gb|ABS55615.1| exsB protein [Methanoregula boonei 6A8]
Length = 217
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 111/228 (48%), Gaps = 29/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+L+ SGG DS+T L +D+ V ++FDY Q++K E+ C +K +L K
Sbjct: 3 AVLILSGGMDSTTLLYDLIDQGYEVSAITFDYHQKHKKEIAC---AQKTCAKLSIPHK-- 57
Query: 71 LGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L++L D++ SSLT+ + ++ T VP RN++FL AA+ A +
Sbjct: 58 -----IVNLSVLNDLAPSSLTRADRDVPEGHYAEESMKQTVVPNRNMVFLSLAASYAIGI 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ D++ YPDCR + A+ TA +L + + + P + L K + K +
Sbjct: 113 GAGHLFYAAHAGDHAIYPDCRPVFVSAMSTAFHLCDWNDLVLQVPYLMLSKGDIAK--KG 170
Query: 187 IG-GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
IG G D N + +CY GK C C AC R + + E
Sbjct: 171 IGLGVDYAN-----TWSCYKGKERS-------CGKCGACTERLEAFRE 206
>gi|187927783|ref|YP_001898270.1| exsB protein [Ralstonia pickettii 12J]
gi|254764370|sp|B2U7H6|QUEC_RALPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|187724673|gb|ACD25838.1| exsB protein [Ralstonia pickettii 12J]
Length = 224
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 11 ALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T L+ A D F+ LS YGQR+ ELE KK+ + +
Sbjct: 5 AIVLLSGGLDSATVLAMANADGFE-TYALSMRYGQRHSSELEAA----KKVAAALGAVRH 59
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + L L G + + +V + +P T+VP RN I L A A +G
Sbjct: 60 EIVD---LDLRKFGGSALTDDALDVPTDGVQSGIPITYVPARNTIMLSLALGWAEAVGAR 116
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
++ G DYSGYPDCR + + A ET NL ++ V V+ P++ + K E +
Sbjct: 117 DLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGERIRVNAPIINMTKAEIIQAG 176
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L S CY K + G C C +C +R+ G+
Sbjct: 177 VRLG----VDYGLTVS--CY-----KADDAGRACGVCDSCRIRKAGF 212
>gi|170076909|ref|YP_001733547.1| exsB protein [Synechococcus sp. PCC 7002]
gi|169884578|gb|ACA98291.1| exsB protein [Synechococcus sp. PCC 7002]
Length = 225
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 112/233 (48%), Gaps = 34/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T + A+ V LSF YGQ++ EL +KI E
Sbjct: 4 AVVLLSGGLDSATSAAQAIADGYEVFALSFRYGQKHSREL----VAAQKIAE-------H 52
Query: 71 LG-EDHILPLAILGDISHSSLTK-NVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG +H + L SSLT N A+ +Q ++P+T+VPGRN +FL A +LA
Sbjct: 53 LGITEHFIMDVNLSQWGGSSLTDVNQAIPQSGVQTGDIPSTYVPGRNTVFLAIALSLAEA 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHV-TVHTPLMWLKKYET 180
I +G+ DYSGYPDCR + + A + +L G+E H + PL+ K E
Sbjct: 113 KQAEAIYLGINAVDYSGYPDCRPEYLAAYQKLADLSSKVGIEGHAPQLVAPLVLDTKVEI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A +G + + + +CY G + C C +C +R + ++
Sbjct: 173 IQKAVKLG------VPIAATWSCYQGGE-------HPCGLCDSCRIRDEALIK 212
>gi|238651010|ref|YP_002916866.1| trans-regulatory protein ExsB [Rickettsia peacockii str. Rustic]
gi|259551571|sp|C4K2L7|QUEC_RICPU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|238625108|gb|ACR47814.1| trans-regulatory protein ExsB [Rickettsia peacockii str. Rustic]
Length = 228
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 31/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+ + +
Sbjct: 5 AVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKDY--N 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAY 124
+ + ++ + + I + N+ + N ++P T+VP RN IFL +A +
Sbjct: 56 VKQHRVINIDLQSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYALGVVE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
+G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ + K +
Sbjct: 116 VIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTKEQ 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++G + ++ +CY D G C C +C R +
Sbjct: 176 IIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAF 216
>gi|300692234|ref|YP_003753229.1| queuosine biosynthesis protein [Ralstonia solanacearum PSI07]
gi|299079294|emb|CBJ51966.1| queuosine biosynthesis protein [Ralstonia solanacearum PSI07]
Length = 224
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKKIVEL 63
A++L SGG DS+T L+ A + LS YGQR+ ELE VR +IV+L
Sbjct: 5 AIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHEIVDL 64
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ S D L + G +P T+VP RN I L A
Sbjct: 65 DLRRFGGSALTDDALEVPTTG---------------VKEGIPITYVPARNTIMLSLALGW 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
A +G ++ G DYSGYPDCR + + A ET NL ++ V V+ P++ + K
Sbjct: 110 AEAVGARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDRIRVNAPIIAMTK 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +G V+ L S CY + G C C +C +R+ G+
Sbjct: 170 AEIIQAGARLG----VDYSLTVS--CYQAD-----DEGRACGVCDSCRIRRAGF 212
>gi|157964844|ref|YP_001499668.1| trans-regulatory protein ExsB [Rickettsia massiliae MTU5]
gi|157844620|gb|ABV85121.1| Trans-regulatory protein ExsB [Rickettsia massiliae MTU5]
Length = 238
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 31/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L + LSF+Y +RN E++ KI L+ + +
Sbjct: 15 AVILLSGGPDSTTVLEIVSKMDYEIYALSFNYHRRNSPEVQ-------KIQGLIKDY--N 65
Query: 71 LGEDHILPLAILGDISHSSLTKNV---AMKIQD---NNLPNTFVPGRNIIFLVFAATLAY 124
+ + ++ + + I + N+ K D +++P T+VP RN IFL +A +A
Sbjct: 66 VKQHRVINIDLQSFIGSALTDDNIDVPKFKHTDQLPSDIPVTYVPARNTIFLSYALGVAE 125
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
+G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ + K +
Sbjct: 126 VIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTKEQ 185
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++G + ++ +CY E G C C +C R +
Sbjct: 186 IIKKGLELG------VDYSKTISCY-----DPTEAGLSCGQCLSCIARLDAF 226
>gi|288931808|ref|YP_003435868.1| exsB protein [Ferroglobus placidus DSM 10642]
gi|288894056|gb|ADC65593.1| exsB protein [Ferroglobus placidus DSM 10642]
Length = 243
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 38/234 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L+ SGG DSST L + L + V L+F YGQR+ E+E K+IVE K
Sbjct: 3 GVLILSGGIDSSTLLYYLLKKGYEVHALTFYYGQRHSKEIE----YSKRIVEEAKKVGKV 58
Query: 71 LGEDHILPLAILGD-ISHSSLTKNVAMKIQDNNLPNTF----------VPGRNIIFLVFA 119
E ++ ++ + + I+ +LT D ++P F VP RN+I L A
Sbjct: 59 --EHKVVDISSIHELIAKGALT-------SDEDVPKAFYTEEVQRRTIVPNRNMILLSIA 109
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKY 178
A A ++G + ++DYS YPDCR + ++A++TA+ LG + + V + P + + K
Sbjct: 110 AGYAVKIGAAEVFYAAHKSDYSVYPDCRKEFVKALDTALYLGNLWTPVELRAPFVDMTKA 169
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
E KL ++ + E + +CY G C SC C R + ++
Sbjct: 170 EIVKLGLEL------KVPYEHTWSCYEGGERP-------CLSCGTCLERTEAFL 210
>gi|189039052|sp|A8F2I5|QUEC_RICM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 228
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 31/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T L + LSF+Y +RN E++ KI L+ + +
Sbjct: 5 AVILLSGGPDSTTVLEIVSKMDYEIYALSFNYHRRNSPEVQ-------KIQGLIKDY--N 55
Query: 71 LGEDHILPLAILGDISHSSLTKNV---AMKIQD---NNLPNTFVPGRNIIFLVFAATLAY 124
+ + ++ + + I + N+ K D +++P T+VP RN IFL +A +A
Sbjct: 56 VKQHRVINIDLQSFIGSALTDDNIDVPKFKHTDQLPSDIPVTYVPARNTIFLSYALGVAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
+G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ + K +
Sbjct: 116 VIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTKEQ 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++G + ++ +CY E G C C +C R +
Sbjct: 176 IIKKGLELG------VDYSKTISCY-----DPTEAGLSCGQCLSCIARLDAF 216
>gi|284104500|ref|ZP_06386146.1| Exoenzyme S synthesis protein B/queuosine synthesis [Candidatus
Poribacteria sp. WGA-A3]
gi|283830200|gb|EFC34454.1| Exoenzyme S synthesis protein B/queuosine synthesis [Candidatus
Poribacteria sp. WGA-A3]
Length = 232
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 32/234 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ L SGG DS+ + A + L+ YGQR+ E++ K E+ W +
Sbjct: 4 AVALASGGLDSTVTAAMARHDGYALYLLTIRYGQRHHAEIQ-------KAREIA-AWLGA 55
Query: 71 LGEDHILPLAILGDISHSSLT------KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E IL L L + S+L KN + + ++ +P+T+VP RN IFL A A
Sbjct: 56 -AEHKILQLD-LHEFGGSALVGAGDVPKNRSDRERETGIPSTYVPARNTIFLSLALAYAE 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
+ + I IG DYSGYPDCR + + A E LG + V + PL+ L K +
Sbjct: 114 VVDASCIFIGANVLDYSGYPDCRPEFLHAFERVARLGTKKGTDGQTVQIKAPLLLLSKTQ 173
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + +G + E +H+CY D R E G C C +C +R +G+ +
Sbjct: 174 IIQQGRVLG------VPFELTHSCY----DPR-EDGAACGRCDSCMIRLQGFRD 216
>gi|110816273|sp|Q55468|QUEC_SYNY3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 232
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 34/234 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS+T + A RV LSF+YGQR+ EL IV+
Sbjct: 4 TAVVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRHDRELRAA----ADIVQ------- 52
Query: 70 SLG-EDHI---LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAY 124
+LG +H L LA G S + + + ++ + +P+T+VPGRN +F+ +LA
Sbjct: 53 ALGIPEHFSINLDLAQWGGSSLTDRQQTLPQTGVEPDIIPSTYVPGRNTVFIALGLSLAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
G + +G+ DYSGYPDCR + + + L G+E + + PL+ L K +
Sbjct: 113 AKGAEAVFLGINAIDYSGYPDCRPEYLATYQQLAALSSKVGVEGRPIQLLAPLIELSKVD 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
A ++G + + ++ +CY G + C C +C LR + +E
Sbjct: 173 IVHKALELG------VPIAQTWSCYAGGEEP-------CGRCDSCRLRDQALIE 213
>gi|260880908|ref|ZP_05403120.2| ExsB protein [Mitsuokella multacida DSM 20544]
gi|260849899|gb|EEX69906.1| ExsB protein [Mitsuokella multacida DSM 20544]
Length = 210
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 35 VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLT-KN 93
V +SF+Y QR+ +ELE KKI K H++ + I S+LT +
Sbjct: 11 VYPISFNYHQRHSIELEGA----KKIASYYGVKK------HLIIETNMEAIGGSALTDEK 60
Query: 94 VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT 150
+ + D N +P T+VP RN+IFL +A A LG T++ IGV DYSGYPDCR +
Sbjct: 61 IEVPEGDVNRHSVPPTYVPARNLIFLSYAMGYAEVLGATHVYIGVNSVDYSGYPDCRPEF 120
Query: 151 IRAIETAINLGMES------HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCY 204
I + + + +T+ TPL L K + L +G + +H+CY
Sbjct: 121 IEKFQALADYATTATAVKGQKITIETPLQDLSKKDIVLLGTKLGAP------FQFTHSCY 174
Query: 205 LGKRDKRYEWGYGCNSCPACYLRQKGWME 233
G C C +C LR +G+ E
Sbjct: 175 KGGEK-------ACGICDSCKLRLRGFAE 196
>gi|86750585|ref|YP_487081.1| ExsB [Rhodopseudomonas palustris HaA2]
gi|86573613|gb|ABD08170.1| ExsB [Rhodopseudomonas palustris HaA2]
Length = 231
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 26/227 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+TCL A V +L DYGQR +VE+M + +
Sbjct: 28 LVLHSGGMDSTTCLLQAKAEGHDVASLGIDYGQR-------------LLVEMM--FAEGQ 72
Query: 72 GEDHILPLAILG---DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E + +P ++ + + N +++ +++ F+PGRNI+FL A +G
Sbjct: 73 CEKYSIPRHVINVNWQKAERQIPLNRSVEEMAHSVSPAFLPGRNIVFLGLGHAHAAGIGA 132
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ IG+ D+SGYPDC + T +N+G + PL+ + K E +LA +G
Sbjct: 133 DELQIGLNCVDFSGYPDCTTQFYDSYCTMLNIGNPGGPKLVAPLLKMSKPEIARLASTLG 192
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
Q ++ +CY + R C C AC L + W E K
Sbjct: 193 LQR------NDTWSCY--RPQIREGSIVACGECDACKLHEFAWQELK 231
>gi|16332015|ref|NP_442743.1| ExsB protein [Synechocystis sp. PCC 6803]
gi|1001327|dbj|BAA10814.1| ExsB protein [Synechocystis sp. PCC 6803]
Length = 271
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 34/234 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS+T + A RV LSF+YGQR+ EL IV+
Sbjct: 43 TAVVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRHDRELR----AAADIVQ------- 91
Query: 70 SLG-EDHI---LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAY 124
+LG +H L LA G S + + + ++ + +P+T+VPGRN +F+ +LA
Sbjct: 92 ALGIPEHFSINLDLAQWGGSSLTDRQQTLPQTGVEPDIIPSTYVPGRNTVFIALGLSLAE 151
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
G + +G+ DYSGYPDCR + + + L G+E + + PL+ L K +
Sbjct: 152 AKGAEAVFLGINAIDYSGYPDCRPEYLATYQQLAALSSKVGVEGRPIQLLAPLIELSKVD 211
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
A ++G + + ++ +CY G + C C +C LR + +E
Sbjct: 212 IVHKALELG------VPIAQTWSCYAGGEEP-------CGRCDSCRLRDQALIE 252
>gi|188997266|ref|YP_001931517.1| exsB protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|254764388|sp|B2V5L9|QUEC_SULSY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|188932333|gb|ACD66963.1| exsB protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 222
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 34/237 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K + ++L SGG DS+ L + F V T+S+ YGQ++ +ELE K++ ++
Sbjct: 3 KKENIIVLLSGGMDSAVLLWLSKTIFKDVYTISYSYGQKHSIELE----YAKELSKIA-- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN----TFVPGRNIIFLVFAATL 122
+ E I+ + L + S+LT ++I N P+ T VP RN+IFL AA+
Sbjct: 57 ---GVKEHFIVEVPHLKQLKGSALTDE-NLEIPSENYPDEPPITTVPMRNLIFLSIAASF 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLK 176
A I NI IG+ D S YPDCR + + E IN ++ + + TP + +
Sbjct: 113 ADVYEIENIGIGIHSLD-SPYPDCRAEFASSAEAVINASSVMVAKKKNRIKIFTPFLGMS 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + KL +++G + E++++CY G C C C R++ E
Sbjct: 172 KTDIAKLGRELG------VPFEKTYSCYKGTVPP-------CGECATCRQREEALRE 215
>gi|218438301|ref|YP_002376630.1| exsB protein [Cyanothece sp. PCC 7424]
gi|254764329|sp|B7K7J4|QUEC_CYAP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218171029|gb|ACK69762.1| exsB protein [Cyanothece sp. PCC 7424]
Length = 230
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 32/234 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+T + AL LS YGQR+ E+E +KIV+++
Sbjct: 4 PKAVILLSGGLDSATTAAIALASGYEAIALSLFYGQRHHKEIEAA----QKIVQVL---- 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ E + L + L S+LT + + +P T+VPGRN +F+ A +LA
Sbjct: 56 -GIKEHYSLEVN-LSQWGGSALTDQSIEVPKAGLNPHLIPITYVPGRNTVFIAIALSLAE 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESH-VTVHTPLMWLKKYE 179
G I +G+ DYSGYPDCR + + A + NL G+E + + PL+ K +
Sbjct: 114 AKGAQAIYLGINAIDYSGYPDCRPEYLEAFQKLANLSSKIGVEGKTIQLIAPLVKDSKVD 173
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A +G + + ++ +CY G+ + C C +C +R + +E
Sbjct: 174 IVRRAVRLG------VPIADTWSCYQGEDEP-------CGLCDSCRIRDRALIE 214
>gi|110816207|sp|Q2IUE0|QUEC2_RHOP2 RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
Length = 210
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 26/227 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+TCL A V +L DYGQR +VE+M + +
Sbjct: 7 LVLHSGGMDSTTCLLQAKAEGHDVASLGIDYGQR-------------LLVEMM--FAEGQ 51
Query: 72 GEDHILPLAILG---DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E + +P ++ + + N +++ +++ F+PGRNI+FL A +G
Sbjct: 52 CEKYSIPRHVINVNWQKAERQIPLNRSVEEMAHSVSPAFLPGRNIVFLGLGHAHAAGIGA 111
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ IG+ D+SGYPDC + T +N+G + PL+ + K E +LA +G
Sbjct: 112 DELQIGLNCVDFSGYPDCTTQFYDSYCTMLNIGNPGGPKLVAPLLKMSKPEIARLASTLG 171
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
Q ++ +CY + R C C AC L + W E K
Sbjct: 172 LQR------NDTWSCY--RPQIREGSIVACGECDACKLHEFAWQELK 210
>gi|126180150|ref|YP_001048115.1| exsB protein [Methanoculleus marisnigri JR1]
gi|189038925|sp|A3CXN3|QUEC_METMJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|125862944|gb|ABN58133.1| preQ(0) biosynthesis protein QueC [Methanoculleus marisnigri JR1]
Length = 222
Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 33/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWKD 69
A+ L SGG DS+T A D + L F YGQR + E EC V K + D
Sbjct: 4 AVCLLSGGMDSTTLAYVAKDTGYDIVALHFTYGQRTEAKERECARAVAKNL--------D 55
Query: 70 SLGEDHI-LPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
+L D + + L I SSLT + ++ +++ +P+T+VP RN L A +LA
Sbjct: 56 AL--DFVEISLEHFTKIGASSLT-DTSIPVEEYAGEEEGVPSTYVPFRNANLLAIATSLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETW 181
+ IGV DY GYPDCR + I A + A++LG E + + TP + + K +
Sbjct: 113 EARRAEAVFIGVQTGDYPGYPDCRPEFIEAFQRAVDLGTAAEPRIVLMTPFVRMSKVDIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ +G + E + +CY + D R C C +C+ R++ + E
Sbjct: 173 RKGLALG------VPYELTWSCY--QNDDR-----ACGVCSSCHYRREAFREL 212
>gi|328950181|ref|YP_004367516.1| exsB protein [Marinithermus hydrothermalis DSM 14884]
gi|328450505|gb|AEB11406.1| exsB protein [Marinithermus hydrothermalis DSM 14884]
Length = 233
Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 30/233 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A+ L SGG DS+T + AL V LSF YGQR+ EL V K +
Sbjct: 3 PKAVALLSGGLDSATAAAQALADGYEVIALSFAYGQRHTRELTAAKEVAKAL-------- 54
Query: 69 DSLGEDHILP--LAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++L LA G + + T V + +P T+VPGRN +FL A +LA
Sbjct: 55 -GIQEHYVLEVNLAQWGGSALTDPTIQVPTGGVNPEVIPPTYVPGRNTVFLAIALSLAEA 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVT-VHTPLMWLKKYET 180
G I +G+ DYSGYPDCR + + A + NL G+E + PL+ K +
Sbjct: 114 RGAEAIYLGINAVDYSGYPDCRPEYLEAFQRLANLATKAGLEGQAPRLVAPLVMDTKADI 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A +G + +E + +CY G + C C +C +R + +E
Sbjct: 174 VRRALALG------VPIERTWSCYQGGEEP-------CGLCDSCRIRDRALIE 213
>gi|299139077|ref|ZP_07032253.1| exsB protein [Acidobacterium sp. MP5ACTX8]
gi|298598757|gb|EFI54919.1| exsB protein [Acidobacterium sp. MP5ACTX8]
Length = 236
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 102/236 (43%), Gaps = 30/236 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI------- 60
P A++ SGG DS+ C + A ++ L F YGQR + EL V +
Sbjct: 4 PKAVVCLSGGMDSTVCAALAARDYESY-GLHFSYGQRTEARELASARAVAAAVGLHDLLE 62
Query: 61 --VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+L + S D + + GD + + ++ P T+VP RN FL
Sbjct: 63 LKTDLFRRIGGSALTDSSIAVPEAGDENADETSHRTGSEV-----PVTYVPFRNAHFLSA 117
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKK 177
A + A LG T + IG E D SGYPDCR A I G E + V TPL+ L+K
Sbjct: 118 AVSWAEVLGATTVFIGAVEQDSSGYPDCRPAYYEAFNQLIRTGTKEGEIAVVTPLIRLRK 177
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E +L ++G L S +CY G+ + C C +C LR + + E
Sbjct: 178 SEIVRLGVELGAP------LHVSWSCYSGETE-------ACGVCESCVLRLRAFAE 220
>gi|325914191|ref|ZP_08176544.1| preQ(0) biosynthesis protein QueC;transcriptional regulator
[Xanthomonas vesicatoria ATCC 35937]
gi|325539694|gb|EGD11337.1| preQ(0) biosynthesis protein QueC;transcriptional regulator
[Xanthomonas vesicatoria ATCC 35937]
Length = 213
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 97/220 (44%), Gaps = 27/220 (12%)
Query: 20 DSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPL 79
DS+ ++ A ++ V LS YGQR+ EL+ V K D
Sbjct: 2 DSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVAAHKVVD---------- 51
Query: 80 AILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
L I S+LT ++ + + +P T+VP RN I L A A +G ++ GV
Sbjct: 52 VDLRSIGGSALTDDIEVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVGANDLFCGVNAV 111
Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLAQDIGGQDLV 193
DYSGYPDCR + +RA E NL ++ V VH PL +L K + + +G V
Sbjct: 112 DYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVREGVRLG----V 167
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ L S CY D R C C AC LR G+ +
Sbjct: 168 DFGLTVS--CYRADVDGR-----ACGHCDACRLRAAGFAD 200
>gi|315636553|ref|ZP_07891789.1| transcription regulator ExsB [Arcobacter butzleri JV22]
gi|315479202|gb|EFU69899.1| transcription regulator ExsB [Arcobacter butzleri JV22]
Length = 228
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 38/247 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS--FDYGQRNK-VELE-----C 52
MN I K A+ + SGG DS+ LS + + D E ++ F+YGQR + EL+ C
Sbjct: 1 MNKISTK--KAICILSGGMDST--LSSYIAKKDGFEIIAVHFNYGQRTQNRELKAFKDIC 56
Query: 53 RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
K E+ + +G + + ++I D+ S L V P T+VP RN
Sbjct: 57 NELDIKSKYEIDIPFFTQIGANALTDMSI--DVPTSGLEAGV---------PITYVPFRN 105
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHT 170
IFL A +A + G T + IGV + D SGYPDC + I+ ++ AIN G ++ + + T
Sbjct: 106 GIFLAITAAIAEKEGATAMYIGVVQEDSSGYPDCTEEFIQDMKKAINQGTKEDTKIEIIT 165
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
PL+ L K AQ + +N+ LE + +CY + + C C +C LR G
Sbjct: 166 PLVHLSK------AQIVQEAIKLNVPLELTWSCYKEEEE-------ACGVCDSCRLRLNG 212
Query: 231 WMEFKEK 237
+ + +K
Sbjct: 213 FEQAGKK 219
>gi|78777268|ref|YP_393583.1| ExsB [Sulfurimonas denitrificans DSM 1251]
gi|110816276|sp|Q30RN3|QUEC_SULDN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78497808|gb|ABB44348.1| ExsB [Sulfurimonas denitrificans DSM 1251]
Length = 224
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
K A+ + SGG DS+ + + L F+Y QR + EL C KKI E +
Sbjct: 4 KNKKAICIMSGGMDSTLGAYMVKEMGYEIVALHFNYAQRTEAKELFCF----KKICEAL- 58
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATL 122
++ ++L L I S+LT K++ + I + +P T+VP RN IFL AA L
Sbjct: 59 ----NVSNSYVLDLDFFSKIGASALTDKSIDIPINGLEEGVPITYVPFRNGIFLSIAAAL 114
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
A + I IGV + D SGYPDC+ I ++E +INLG E+ + ++ PL+ L K +
Sbjct: 115 AEKEEAVLIAIGVVQEDSSGYPDCKDSFITSMEQSINLGTKDETKIKIYMPLVHLSKSQI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ A + N+ LE + +CY +D+ C C +C LR G+
Sbjct: 175 VEHALRL------NVPLELTWSCY---KDEE----AACGVCDSCRLRLNGF 212
>gi|75908579|ref|YP_322875.1| ExsB protein [Anabaena variabilis ATCC 29413]
gi|110816209|sp|Q3MAK6|QUEC_ANAVT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|75702304|gb|ABA21980.1| preQ(0) biosynthesis protein QueC [Anabaena variabilis ATCC 29413]
Length = 227
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 104/238 (43%), Gaps = 39/238 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-------CVRKKIVEL 63
A++L SGG DSST L A ++SFDY QR++ EL V+ ++V
Sbjct: 3 AVILLSGGLDSSTILYQAKADGCECYSISFDYQQRHRRELHSAFLVAQTAGIVQHQVVNF 62
Query: 64 -MPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ W S L +D I L + ++ N+P T+VP RN IFL FA
Sbjct: 63 DLRLWGGSALTDDKI------------DLPQERSVDAMSQNIPVTYVPARNTIFLSFALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLK 176
A + + IGV DYSGYPDCR D I A++ LG + + + PL+ LK
Sbjct: 111 YAEAIAAERVYIGVNALDYSGYPDCRPDYIEAMQEVFRLGTKQGREGQPINIVAPLINLK 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K +L +G + + +CY G C C +C LR + E
Sbjct: 171 KTAIIQLGNQLG------VPWNLTWSCYNGGD-------VACGVCDSCRLRLAAFAEL 215
>gi|118574283|sp|Q3AR02|QUEC_CHLCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 228
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPKW 67
A+LL SGG DS + A + + +YGQR + EL +C I + +
Sbjct: 3 AILLLSGGMDSLVTTAIAQQAGFELAAMHVNYGQRTMQRELNSFRAICSHYSIQQRLEIN 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D LG+ +G S + L+ V++ ++ + +P ++VP RN FL A + A +
Sbjct: 63 ADFLGK--------IGGSSLTDLSMPVSVANLESHAIPASYVPFRNAGFLSMAVSWAEVI 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLA 184
G I IG E D SGYPDCR A I LG E+H+ V TPL+ LKK+E +
Sbjct: 115 GAERIFIGAVEEDSSGYPDCRKIFYEAFNRVIELGTKPETHIEVVTPLIALKKWEIVRKG 174
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++ + S +CY + G C C +C LR + +
Sbjct: 175 IEL------HAPFAFSWSCYKNE-------GQACGVCDSCALRLRAF 208
>gi|313205278|ref|YP_004043935.1| exsb protein [Paludibacter propionicigenes WB4]
gi|312444594|gb|ADQ80950.1| exsB protein [Paludibacter propionicigenes WB4]
Length = 214
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 34/230 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMPKWK 68
++L+SGG DSS L DR R L+F+YG ++ ++E R C R I
Sbjct: 5 VILYSGGMDSSVALYEHADRIRRA--LTFNYGSKHNLREMEYAARNCKRLGI-------- 54
Query: 69 DSLGEDHILPLAI--LGDISH--SSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E H++ L + +G +S S +D N+ T VP RN I L AA +A
Sbjct: 55 ----EHHVIELDMNKMGFVSDLLQSGGDIPNGHYEDQNMIKTVVPFRNGIMLSIAAGIAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G ++I D++ YPDCR + I+ + AI+LG +H + P L K E +
Sbjct: 111 SIGCDKLMISNHAGDHAIYPDCREEFIQTMNKAISLGTYNHCEILAPYTNLTKREIALIG 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++IG + E++++CY G C +C C R++G F
Sbjct: 171 KEIG------VPFEDTYSCYNGLETH-------CGTCGTCTERKEGLEGF 207
>gi|282889933|ref|ZP_06298468.1| hypothetical protein pah_c008o016 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500126|gb|EFB42410.1| hypothetical protein pah_c008o016 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 221
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 108/241 (44%), Gaps = 39/241 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETL--SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ L+ ++ ++ETL SFDYGQR++VELE KKI
Sbjct: 3 AIVLLSGGLDSAVMLARLHEQ--QIETLAISFDYGQRHRVELE----FAKKIA------- 49
Query: 69 DSLGEDH-ILPLAILGDISHSSLTKNVAMK-------IQDNNLPNTFVPGRNIIFLVFAA 120
D G +H ++P+ L S+LT + + I ++P T+VP RN +FL +A
Sbjct: 50 DFYGIEHEVIPIDPLIFRGGSALTSSATPQKGKSKEDILKQSIPFTYVPARNTLFLAYAL 109
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWL 175
A G I G D+ YPDCR A + N + V + TPL+
Sbjct: 110 AKAEMHGADQIHFGSNAMDFLSYPDCRPGYFEAAQELFNRATKQSVEGKAPQIVTPLLKW 169
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E K + + E + +CY + G C C AC LRQ ++
Sbjct: 170 TKEEIVKEGYRL------KVPFELTSSCYDPTAN-----GQPCQQCDACTLRQDAFLSIS 218
Query: 236 E 236
E
Sbjct: 219 E 219
>gi|325678487|ref|ZP_08158102.1| protein ExsB [Ruminococcus albus 8]
gi|324109798|gb|EGC03999.1| protein ExsB [Ruminococcus albus 8]
Length = 228
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELE------CRLCVRKKIVE 62
AL+LFSGG DSSTCL A+D++ D V LS YGQ++ E+ V+++ ++
Sbjct: 3 ALVLFSGGLDSSTCLGLAVDKYGADNVLALSVYYGQKHDKEIRASEKVAAHYGVKQQTLD 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVPGRNIIFLVFAAT 121
L ++ G D L GDI S K + + P +T+VP RN +FL AA+
Sbjct: 63 LAKIFE---GSDCTLLKGSDGDIPKESYAKQIE---ESAGKPVSTYVPFRNGLFLASAAS 116
Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+A G I G D +G YPDC + RA+ AI LG + + P + L K +
Sbjct: 117 IALSNGCDVIYYGAHSDDAAGNAYPDCSENFNRAMNEAIYLGSGEQLRIEAPFVSLTKAD 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLG 206
+ ++G + E + +CY G
Sbjct: 177 VVRKGVELG------VPFELTWSCYEG 197
>gi|257452359|ref|ZP_05617658.1| queuosine biosynthesis protein QueC [Fusobacterium sp. 3_1_5R]
gi|257465849|ref|ZP_05630160.1| queuosine biosynthesis protein QueC [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917006|ref|ZP_07913246.1| archaeosine biosynthesis protein queC [Fusobacterium gonidiaformans
ATCC 25563]
gi|317058902|ref|ZP_07923387.1| archaeosine biosynthesis protein queC [Fusobacterium sp. 3_1_5R]
gi|313684578|gb|EFS21413.1| archaeosine biosynthesis protein queC [Fusobacterium sp. 3_1_5R]
gi|313690881|gb|EFS27716.1| archaeosine biosynthesis protein queC [Fusobacterium gonidiaformans
ATCC 25563]
Length = 231
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 109/234 (46%), Gaps = 32/234 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVE-LECRLCVRKKIVELMPKWK 68
L+L SGG DS+TCL+ A+D++ D+V LS YGQ++ E L R + VEL+
Sbjct: 4 LVLLSGGLDSTTCLAIAVDKYGADQVVALSASYGQKHTKEILSARAIAKYYQVELL---- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-------MKIQDNNLPNTFVPGRNIIFLVFAAT 121
L I + +SHS T+ V + Q+ + +T+VP RN +FL AA+
Sbjct: 60 -ELNLSKIFSYSNCSLLSHS--TEEVPHHSYAEQLNQQEEEILSTYVPFRNGLFLSTAAS 116
Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+A + I+ G D +G YPDC A+ TAI G V V P + L K +
Sbjct: 117 IALSKECSIILYGAHSDDAAGNAYPDCSPAFNEAMNTAIYEGSGRQVKVEAPFIGLHKKD 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL + + E + +CY GK + C C C R+K + E
Sbjct: 177 IVKLGLTL------QVPYELTWSCYEGKE-------HSCGECGTCIDREKAFEE 217
>gi|301167719|emb|CBW27303.1| putative transcriptional regulatory protein [Bacteriovorax marinus
SJ]
Length = 233
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKD 69
A++L SGG DS + A ++ R+ L +YGQ+ + EL+C E+ +
Sbjct: 9 AVVLVSGGMDSLVTAAMANEKHQRMAFLHLNYGQKTQDRELKC-------FNEIADHYNV 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAY 124
I+ ++ L I SSLT + ++ ++D +P+++VP RN + A + +
Sbjct: 62 PKSLRKIIDISFLSQIGGSSLTDD-SIDVKDYKGDSEEIPDSYVPFRNTHIVAMAVSWSE 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKL 183
+G I IG D SGYPDCR +A+ I G + + V TP++ +KK E K
Sbjct: 121 VVGAKKIYIGAVYEDSSGYPDCRPSYYQALNNLIKEGTKDGDIEVVTPVIHMKKEEIVKK 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A + L S++CY + DK C C +C LR +G+
Sbjct: 181 AISLQAP------LSSSYSCY-ARGDK------ACGICDSCALRLRGF 215
>gi|157738264|ref|YP_001490948.1| ExsB family transcriptional regulator [Arcobacter butzleri RM4018]
gi|189038892|sp|A8EWF5|QUEC_ARCB4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157700118|gb|ABV68278.1| transcriptional regulator, ExsB family [Arcobacter butzleri RM4018]
Length = 228
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 119/247 (48%), Gaps = 38/247 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS--FDYGQRNK-VELE-----C 52
MN I K A+ + SGG DS+ LS + + D E ++ F+YGQR + EL+ C
Sbjct: 1 MNKISTK--KAICILSGGMDST--LSSYIAKKDGFEIIAVHFNYGQRTQNRELKAFRDIC 56
Query: 53 RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
K E+ + +G + + ++I D+ L V P T+VP RN
Sbjct: 57 NELDIKSKYEIDIPFFTQIGANALTDMSI--DVPTGGLEAGV---------PITYVPFRN 105
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHT 170
IFL A +A + G T + IGV + D SGYPDC + I+ ++ AIN G ++ + + T
Sbjct: 106 GIFLAITAAIAEKEGATAMYIGVVQEDSSGYPDCTEEFIQDMKKAINQGTKEDTKIEIIT 165
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
PL+ L K AQ + +N+ LE + +CY + + C C +C LR G
Sbjct: 166 PLVHLSK------AQIVQEAIKLNVPLELTWSCYKEEEE-------ACGVCDSCRLRLNG 212
Query: 231 WMEFKEK 237
+ + +K
Sbjct: 213 FEQAGKK 219
>gi|57642198|ref|YP_184676.1| ExsB family transcriptional regulator [Thermococcus kodakarensis
KOD1]
gi|74505472|sp|Q5JHU5|QUEC_PYRKO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|57160522|dbj|BAD86452.1| predicted transcription regulator, ExsB family [Thermococcus
kodakarensis KOD1]
Length = 239
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 38/241 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++LFSGG DS+ CL WA +D V L+ +YG + V K+ E K D
Sbjct: 4 AVVLFSGGLDSTACLYWAKKNYDEVIMLTVNYGSNEEK-------VTNKVAEFFSKELD- 55
Query: 71 LGEDHILPLAIL--------GDISHSSLTKNVAMKIQDNNLPN----------TFVPGRN 112
+PL I+ + ++L K+ L N +VP RN
Sbjct: 56 ------VPLKIVRLDFLEEFSKLRGTTLVGGETPKVTGEELENIEVAQETAKSVWVPARN 109
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
++ + AA+L LG +IV+G + + +PD + + + + G + V V PL
Sbjct: 110 VVLIAVAASLLDALGGGDIVVGFNAEEGATFPDNTPEFVEKMNEMLKYGTMAEVRVVAPL 169
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K KL +++G + E S++CY+ K C C +C R +G +
Sbjct: 170 INLDKRGIAKLLKELGAK------YEYSNSCYMPKGFTEDGKPIHCGECESCVRRHRGLI 223
Query: 233 E 233
E
Sbjct: 224 E 224
>gi|159026229|emb|CAO86385.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 225
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 118/234 (50%), Gaps = 36/234 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T + A+ ++ LSF YGQR++ EL KKI + +
Sbjct: 5 AIILLSGGLDSATTAAIAIAAGYQLIALSFRYGQRHEREL----AAAKKIANFL-----N 55
Query: 71 LGEDHILP--LAILGDISHSSLT-KNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ E H++ L++ G S+LT +++A+ I N +P T+VPGRN +F+ A +LA
Sbjct: 56 IKEHHLIEVNLSLWGG---SALTDQSIAIPQEGINPNIIPITYVPGRNTVFISIALSLAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVT-VHTPLMWLKKYE 179
I +G+ DYSGYPDCR + A +T NL G+E + PL+ K +
Sbjct: 113 ARAAEAIYLGINAVDYSGYPDCRPQYLEAFQTLANLSSKAGLEGKAPQLIAPLVMDSKVD 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A +G + + ++ +CY G+ C C +C +R + +E
Sbjct: 173 IVRRAVSLG------VPIADTWSCYQGEVKP-------CGLCDSCRIRDQALIE 213
>gi|237737357|ref|ZP_04567838.1| succinoglycan biosynthesis regulator [Fusobacterium mortiferum ATCC
9817]
gi|229421219|gb|EEO36266.1| succinoglycan biosynthesis regulator [Fusobacterium mortiferum ATCC
9817]
Length = 232
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 107/232 (46%), Gaps = 32/232 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
L+L SGG DSSTCL+ A+DR+ D V LS YGQ++ ELE R +EL+ +
Sbjct: 4 LVLLSGGVDSSTCLAMAVDRYGKDNVVALSASYGQKHTKELESARKIASYYQIELI---E 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-------TFVPGRNIIFLVFAAT 121
+LG+ I + +SHS K + D L N T+VP RN +FL AA+
Sbjct: 61 INLGK--IFSFSNCSLLSHSD--KEIPQGSYDEQLRNIDGEKLSTYVPFRNGLFLSTAAS 116
Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+A I G D +G YPDC + A+ AI LG + + P + + K +
Sbjct: 117 IALSKNCQVIYYGAHSDDSAGDAYPDCSPEFNEAMNRAIYLGSGKELKIEAPFVNMHKSD 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++ NL E + +CY G Y C C C R+K +
Sbjct: 177 IVKKGLEL------NLPYELTWSCYEGGE-------YPCGKCGTCIDREKAF 215
>gi|322434471|ref|YP_004216683.1| exsB protein [Acidobacterium sp. MP5ACTX9]
gi|321162198|gb|ADW67903.1| exsB protein [Acidobacterium sp. MP5ACTX9]
Length = 231
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+L SGG DS C + A R + + F YGQR E R + + + KD
Sbjct: 4 AVLCLSGGMDSCVCAALAA-RDHELYAVHFSYGQRT----EARELRSAEAIAKLVGAKDF 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD------------NNLPNTFVPGRNIIFLVF 118
L L + + I S+LT ++ + D + +P T+VP RN FL
Sbjct: 59 LH----LKIELFRRIGGSALTDR-SIAVPDAVAEEAMHGRTGDEVPVTYVPFRNAHFLSA 113
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKK 177
A + A LG + IG E D SGYPDCR A I G E + V TPL+ ++K
Sbjct: 114 AVSWAEVLGAKVVTIGAVEQDSSGYPDCRPAYYDAFNELIRQGTKEGEIRVETPLIRMRK 173
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E +L ++G L S +CY G+ + C C +C LR + + E
Sbjct: 174 NEIVRLGVELGAP------LHVSWSCYSGEDE-------ACGVCESCALRLRAFRE 216
>gi|237755832|ref|ZP_04584430.1| ExsB protein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691997|gb|EEP61007.1| ExsB protein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 222
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 112/237 (47%), Gaps = 34/237 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K + ++L SGG DS+ L + F V +S+ YGQ++ +ELE K++ ++
Sbjct: 3 KKENIIVLLSGGMDSAVLLWLSKTMFKDVYAISYSYGQKHSIELE----YAKELSKIA-- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN----TFVPGRNIIFLVFAATL 122
+ E I+ + L + ++LT + ++I N P+ T VP RN+IFL AA+
Sbjct: 57 ---GVKEHFIVEVPHLKQLKGNALT-DENLEIPSENYPDEPPITTVPMRNLIFLSIAASF 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLK 176
A I NI IG+ D S YPDCR + + E IN ++ + + TP + +
Sbjct: 113 ADVYEIENIGIGIHSLD-SPYPDCRAEFASSAEAVINASSVMVAKKKNRIKIFTPFLGMG 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + KL +++G + E++++CY G C C C R+ E
Sbjct: 172 KTDIAKLGRELG------VPFEKTYSCYKGTVPP-------CGECATCRQREDALRE 215
>gi|242399134|ref|YP_002994558.1| Archaeosine biosynthesis protein queC [Thermococcus sibiricus MM
739]
gi|242265527|gb|ACS90209.1| Archaeosine biosynthesis protein queC [Thermococcus sibiricus MM
739]
Length = 241
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 24/238 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A++LFSGG DS+ CL WA + +D V L+ +YG + V KI E K
Sbjct: 2 KMTRAVVLFSGGLDSTACLYWAKENYDEVIMLTINYGSNEEK-------VINKIAEFFSK 54
Query: 67 WKD-SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----------FVPGRNIIF 115
+ L H+ L + ++L K+ +L NT +VP RN++
Sbjct: 55 ELNIPLKIIHLDFLEEFSKLRGTTLVGGETPKVTSKDLENTEKAQETAKSVWVPARNLVL 114
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+L LG +I++G + +PD + + + + G S V V PL+ L
Sbjct: 115 ISVAASLLDALGGGDIIVGFNAEEGMTFPDNTPEFVEKMNNMLKYGSMSDVKVVAPLIGL 174
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K +L ++ G + E S++CY+ K C C +C R +G ++
Sbjct: 175 SKKGIARLLKEFGAK------YEYSNSCYMPKGFTEDGKPIHCGECESCIRRHRGLVD 226
>gi|218961226|ref|YP_001741001.1| exsB protein [Candidatus Cloacamonas acidaminovorans]
gi|167729883|emb|CAO80795.1| exsB protein [Candidatus Cloacamonas acidaminovorans]
Length = 222
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS + A+ D V L F+YGQ K EL E + +
Sbjct: 4 AIVLLSGGMDSLVTAACAVSECDEVCFLHFNYGQLTEKKELSS--------FEALVNYYQ 55
Query: 70 SLGEDHILPLAILGDISHSSLT-KNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + ++ + L +I S+LT +N+ ++ + + +P T+VP RN IFL A A
Sbjct: 56 PI-QAKVINYSWLSEIGGSALTDRNIPVQKGILSSSKIPVTYVPFRNAIFLCSAVAWAEV 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWKL 183
+ T I IG E D SGYPDCR +A I G + + + TP++ K E +L
Sbjct: 115 IQATRIYIGAVEEDSSGYPDCREVFFQAFNKVIATGTKGEIPIEISTPVLHKSKAEIVQL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++ E S +CY E C C +C LR+K +
Sbjct: 175 GIELKAP------FELSWSCYT-------ENDVACGVCESCLLRKKAF 209
>gi|332158265|ref|YP_004423544.1| hypothetical protein PNA2_0623 [Pyrococcus sp. NA2]
gi|331033728|gb|AEC51540.1| hypothetical protein PNA2_0623 [Pyrococcus sp. NA2]
Length = 239
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 26/235 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKV------ELECRL-CVRK 58
A++LFSGG DS+ CL WA +D V L+ +YG R N+V EL L +R
Sbjct: 4 AVVLFSGGLDSTACLYWAKRNYDEVIMLTINYGSREERVTNRVAEFFSNELNVPLKIIRV 63
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+E K +S + G+I H S + ++I + +VP RN++ +
Sbjct: 64 DFLEEFAKLSESS--------LVKGNIPHVSAKELEDIEIARETARSVWVPARNLVLISI 115
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA+L LG +IV+G + +PD + + + + S V V PL+ L K
Sbjct: 116 AASLLDALGGGDIVVGFNREEGRTFPDNTLEFVERVNKVLEYATMSKVKVVAPLIDLDKK 175
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL ++ G + E S++CY + C C +C R +G +E
Sbjct: 176 GIAKLLKEFGAK------YEYSNSCYDPQGFTEDGKPIHCGKCESCVRRHRGLIE 224
>gi|124516512|gb|EAY58020.1| ExsB protein [Leptospirillum rubarum]
gi|206603411|gb|EDZ39891.1| ExsB protein [Leptospirillum sp. Group II '5-way CG']
Length = 241
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 29/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+++L SGG DS+ + A+ RV L YG R + E + + W
Sbjct: 19 SVVLVSGGMDSAVTAAMAIRESPRVAFLHVRYGARAQDSEE------RAFRNIARHW--G 70
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATLAYR 125
+ ++ LA LG + S+LT +M++ N +P+T+VP RN FL A +
Sbjct: 71 VDRVQVIDLAPLGALGGSALTDR-SMEVPAANPDAPGIPSTYVPFRNAHFLAIATSWCEV 129
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKL 183
L I IG E D SGYPDCR A E AI LG + + + TP++ L K E
Sbjct: 130 LKFDRIWIGAVEEDSSGYPDCRRIFYDAFEEAIRLGTRPGTGIRIMTPVIHLNKGEIVSE 189
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + E + +CY E C C +C LR +G+
Sbjct: 190 GVRLG------VPFEHTWSCY-------REGTRACGRCDSCALRLRGF 224
>gi|307545034|ref|YP_003897513.1| queuosine biosynthesis protein QueC [Halomonas elongata DSM 2581]
gi|307217058|emb|CBV42328.1| K06920 queuosine biosynthesis protein QueC [Halomonas elongata DSM
2581]
Length = 257
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 41/240 (17%)
Query: 5 IKKAPSA---LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLC---- 55
+ +AP++ ++++SGG DS T L AL V LSFDYGQR+ EL+ R+C
Sbjct: 20 MSQAPASSATVVIYSGGMDSFTVLHRALGEGRDVHALSFDYGQRHSRELDVARRVCRDLE 79
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD---NNLPNTFVPGR 111
V ++V++ AI G I +S+LT M D +NL +T VP R
Sbjct: 80 VPHQVVDIR---------------AIHGLIDNSALTDAERVMPDGDYDADNLADTVVPNR 124
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
N++ L A A +G + G D+ YPDCR + + A+ + V +HTP
Sbjct: 125 NMMLLSMAIAKAVNIGAGRVDYGAHGGDHVLYPDCRPEFVEAMNAVAGIANFEPVEIHTP 184
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ K + +G L ++ TCYLG+ C C +C R +
Sbjct: 185 YLRHTKADILADGLSMG------LDYADTWTCYLGE-------SLACGRCGSCRERLAAF 231
>gi|110816248|sp|O57836|QUEC_PYRHO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
Length = 239
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK-WKD 69
++LFSGG DS+ CL WA +D V L+ +YG R + V K+ E K K
Sbjct: 4 GVVLFSGGLDSTACLYWAKRHYDEVIMLTINYGSREE-------SVMNKVAEFFSKELKI 56
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----------NTFVPGRNIIFLVFA 119
L + L +S S+L + ++ + L + +VP RN++ + A
Sbjct: 57 PLKIIRVNFLNEFSKLSGSALVEGNVPRVSASELEVIERAKETARSVWVPARNLVLISIA 116
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A+L LG +I++G + + +PD + + + A+ + V V PL+ L K
Sbjct: 117 ASLLDALGGGDIIVGFNKEEGETFPDNTKEFVERVNKALEYATMNKVRVVAPLIELDKRG 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +++G + E S++CY K C C +C R +G ME
Sbjct: 177 IARLLKELGAK------YEYSNSCYDPKGFTEDGKPIHCGRCESCVRRHRGLME 224
>gi|221633771|ref|YP_002522997.1| exsB protein [Thermomicrobium roseum DSM 5159]
gi|221157005|gb|ACM06132.1| exsB protein [Thermomicrobium roseum DSM 5159]
Length = 226
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 32/236 (13%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIVELM 64
K++ A++L SGG DS+T L++ LD + V LSF YGQR++ ELE + +K+
Sbjct: 5 KRSQRAVVLLSGGLDSTT-LAYLLDAYGFVLYGLSFRYGQRHERELEAARAIAEKL---- 59
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAATLA 123
E ++ + L SSL + + Q + +P+T+VP RN++FL A A
Sbjct: 60 -----RFAEHRVVTID-LAQWGGSSLVGSGEIPRQPTSGIPSTYVPVRNLVFLAIAHAYA 113
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKK 177
+ + I V + DYSGYPDCR + + A + A +L V V P + + K
Sbjct: 114 EAIDADAVAIAVSQVDYSGYPDCRGEFLAAYQQAADLASRRFVETGRRIPVLAPFLDVPK 173
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +G + E+ +CY G C C +C LR + + E
Sbjct: 174 SAIVRLGLRLG------VDYAETWSCYRGGERP-------CQECDSCRLRAQAFAE 216
>gi|14590038|ref|NP_142102.1| hypothetical protein PH0085 [Pyrococcus horikoshii OT3]
gi|3256471|dbj|BAA29154.1| 269aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 269
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK-WKD 69
++LFSGG DS+ CL WA +D V L+ +YG R + V K+ E K K
Sbjct: 34 GVVLFSGGLDSTACLYWAKRHYDEVIMLTINYGSREE-------SVMNKVAEFFSKELKI 86
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----------NTFVPGRNIIFLVFA 119
L + L +S S+L + ++ + L + +VP RN++ + A
Sbjct: 87 PLKIIRVNFLNEFSKLSGSALVEGNVPRVSASELEVIERAKETARSVWVPARNLVLISIA 146
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A+L LG +I++G + + +PD + + + A+ + V V PL+ L K
Sbjct: 147 ASLLDALGGGDIIVGFNKEEGETFPDNTKEFVERVNKALEYATMNKVRVVAPLIELDKRG 206
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +++G + E S++CY K C C +C R +G ME
Sbjct: 207 IARLLKELGAK------YEYSNSCYDPKGFTEDGKPIHCGRCESCVRRHRGLME 254
>gi|225847995|ref|YP_002728158.1| ExsB protein [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644692|gb|ACN99742.1| ExsB protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 219
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 32/239 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K + ++L SGG DS+T L A F+ V +SF YGQ++ +E+E K++ ++
Sbjct: 3 KEKNIIVLLSGGMDSATLLWLAKQNFEEVYAISFIYGQKHSIEIE----YAKELAKIA-- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLA 123
+ + I+ L L + S+LT ++ + QD + P T VP RN+ FL AA A
Sbjct: 57 ---DVKQHFIVELPHLKQLGKSALTDPSLEVPSQDYTDQPPITTVPMRNLTFLSIAAAFA 113
Query: 124 YRLGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
I NI IG+ D S YPDCR + + + ++ + ++TP + + K
Sbjct: 114 DVYEIENIGIGIHSLD-SPYPDCRAEFASAAEAAINASSVMVANKKNRIKIYTPFLGMSK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ KL +G + E++++CY G C C C R++ KE
Sbjct: 173 VDIAKLGYKLG------VPFEKTYSCYKGTNPP-------CGECATCRQREEALKSIKE 218
>gi|166365323|ref|YP_001657596.1| transcription regulator ExsB-like protein [Microcystis aeruginosa
NIES-843]
gi|189038927|sp|B0JIA6|QUEC_MICAN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|166087696|dbj|BAG02404.1| transcription regulator ExsB homolog [Microcystis aeruginosa
NIES-843]
Length = 230
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 36/234 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T + AL ++ LSF YGQR++ EL KKI + +
Sbjct: 5 AIILLSGGLDSATTAAIALAAGYQLIALSFRYGQRHEREL----AAAKKIANFL-----N 55
Query: 71 LGEDHILP--LAILGDISHSSLT-KNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ E H++ L++ G S+LT +++A+ I + +P T+VPGRN +F+ A +LA
Sbjct: 56 IKEHHLIEVNLSLWGG---SALTDQSIAIPQEGINPDIIPITYVPGRNTVFISIALSLAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVT-VHTPLMWLKKYE 179
I +G+ DYSGYPDCR + + A +T NL G+E + PL+ K +
Sbjct: 113 AREAEAIYLGINAVDYSGYPDCRPEYLDAFQTLANLSSKAGLEGKAPQLIAPLVMDSKVD 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ A +G + + ++ +CY G+ + C C +C +R + +E
Sbjct: 173 IVRRAVSLG------VPIADTWSCYQGEVEP-------CGLCDSCRIRDQALIE 213
>gi|289548574|ref|YP_003473562.1| exsB protein [Thermocrinis albus DSM 14484]
gi|289182191|gb|ADC89435.1| exsB protein [Thermocrinis albus DSM 14484]
Length = 214
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 43/234 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-----CRLC-VRKKIVELMP 65
L+L SGG DS+ L A F+ V +SFDYGQR+ VEL+ +L V++ I+ +P
Sbjct: 5 LVLLSGGMDSAVLLWLAKREFEEVYAISFDYGQRHSVELKYAKILAQLAGVKEHILVEVP 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ I G + + + + P T VP RN++FL A++ A
Sbjct: 65 SYR-----------YIKGSALIDTRVEVPTGEYPTHAPPITTVPMRNLVFLAIASSFADA 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLK 176
L I ++ IGV D + YPDCR + I +++TA ++ V V P + +
Sbjct: 114 LEIDHVGIGVHALD-TPYPDCRPEFITAAEAAINAASVQTATK---KTRVHVFAPFLGMT 169
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
K + L +++G + E++++CY G C CP C R++
Sbjct: 170 KRQIALLGKELG------VPFEKTYSCYRGTEPP-------CGECPTCIQREEA 210
>gi|206603341|gb|EDZ39821.1| ExsB protein [Leptospirillum sp. Group II '5-way CG']
Length = 241
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++L SGG DS+ + A+ R+ L YG R + E + + W
Sbjct: 18 GSVVLVSGGMDSAVTAAMAIRESPRIAFLHVRYGARAQDSEE------RAFRNIARHW-- 69
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATLAY 124
+ ++ LA LG + S+LT +M++ N +P+T+VP RN FL A +
Sbjct: 70 GVDRVQVVDLAPLGVLGGSALTDR-SMEVPAANPDAPGIPSTYVPFRNAHFLAIATSWCE 128
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWK 182
L I IG E D SGYPDCR A E AI LG + + + TP++ L K E
Sbjct: 129 VLKFDRIWIGAVEEDSSGYPDCRRIFYDAFEEAIRLGTRPGTGIRIMTPVIHLNKGEIVS 188
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + E + +CY E C C +C LR +G+
Sbjct: 189 EGIRLG------VPFEHTWSCY-------REGTRACGRCDSCALRLRGF 224
>gi|315231295|ref|YP_004071731.1| queuosine biosynthesis QueC-like ATPase [Thermococcus barophilus
MP]
gi|315184323|gb|ADT84508.1| queuosine biosynthesis QueC-like ATPase [Thermococcus barophilus
MP]
Length = 242
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 20/232 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKVE--LECRLCVRKKIVEL 63
A++LFSGG DS+ CL WA +D V L+ +YG NKV L + KI++L
Sbjct: 4 AVVLFSGGLDSTACLYWAKKNYDEVIMLTINYGSNEERATNKVAEFFSKELNIPLKIIKL 63
Query: 64 MPKWKDSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
D L E L L G+ + M+ + +VP RN++ + AA+
Sbjct: 64 -----DFLEEFSKLRGTTLVGGETPRVTARDLENMERAQETAKSVWVPARNVVLISVAAS 118
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L LG +I++G + + +PD + + + + G S V V PL+ L K
Sbjct: 119 LLDALGGGDIIVGFNAEEGATFPDNTPEFVEKMNEMLRYGALSEVKVVAPLINLDKKGIA 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL +++ N E S++CY+ K C C +C R +G ME
Sbjct: 179 KLLKEL------NAKYEYSNSCYMPKGFTEDGKPIHCGECESCVRRHRGLME 224
>gi|330506762|ref|YP_004383190.1| ExsB protein [Methanosaeta concilii GP-6]
gi|328927570|gb|AEB67372.1| ExsB protein [Methanosaeta concilii GP-6]
Length = 220
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 36/230 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVELM 64
A+L+ SGG DS+T L L V+ L+F+YGQ++K E++C RL V +I++L
Sbjct: 3 AVLILSGGLDSTTLLYKLLADGYLVDALTFNYGQKHKKEIDCAIAITSRLDVPHQIIDL- 61
Query: 65 PKWKDSLGEDHILPLAILG--DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
LGE A+LG ++ T+ A + T VP RN+I L AA
Sbjct: 62 STLAAFLGES-----ALLGKKEVPSCHYTEEAARQ--------TVVPNRNMIMLSVAAGY 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWLKKYETW 181
A IT + + D + YPDCR + + A++ AI LG + V + P + + K +
Sbjct: 109 AEAHEITELFYAAHKNDQTIYPDCRPEFVEALKPAIRLGTAWNPVELQAPFVHMTKADIV 168
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++ + + E + +CY GK C +CP C R++ +
Sbjct: 169 RMGLKL------QVPYELTWSCYKGK-------AMPCRTCPTCIEREEAF 205
>gi|83649265|ref|YP_437700.1| PP-loop superfamily ATPase [Hahella chejuensis KCTC 2396]
gi|110816229|sp|Q2S7U9|QUEC_HAHCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|83637308|gb|ABC33275.1| predicted PP-loop superfamily ATPase [Hahella chejuensis KCTC 2396]
Length = 231
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 37/230 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVELM 64
A+ +FSGG DS T L+ + V LSF+YGQR+ ELEC L + KI+++
Sbjct: 13 AVAIFSGGMDSFTLLNELVQEGKEVFALSFNYGQRHSKELECARQVCESLNIAHKIIDIT 72
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAAT 121
AI ++ SSLT ++ + ++ N+ +T VP RN+I L A
Sbjct: 73 ---------------AINSLLAGSSLTDDIQVPEGHYEEENMKSTVVPNRNMILLSLAIG 117
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A L + G D++ YPDCR + + A L V V P ++ K E
Sbjct: 118 YAVSLKAEAVYYGAHGGDHAIYPDCRPAFVEIMSEASKLANYEPVEVRAPYLYETKIEIL 177
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G L ++ TCY G+ C C +C R + +
Sbjct: 178 RRGLALG------LDYGQTWTCYNGREK-------ACGKCGSCVERLEAF 214
>gi|328953828|ref|YP_004371162.1| exsB protein [Desulfobacca acetoxidans DSM 11109]
gi|328454152|gb|AEB09981.1| exsB protein [Desulfobacca acetoxidans DSM 11109]
Length = 227
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 107/236 (45%), Gaps = 34/236 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPKW 67
A++L SGG DS + A +D + +YGQR + EL+ L V + L+
Sbjct: 7 AVVLLSGGLDSCVTAAVAGQDYD-LALFHGNYGQRTVRRELQAFRELAVFFRCRHLLEAN 65
Query: 68 KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLA 123
D LG I SSLT ++A+ D LP+T+VP RN I + A
Sbjct: 66 LDYLGA-----------IGGSSLTDASLAIPQTDTESEELPSTYVPFRNTILIAAVVAWA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETW 181
+G + + IG D YPDCR D A I LG +H+ +HTPL+ L K +
Sbjct: 115 EVIGASAVFIGANIIDGPDYPDCRPDYFNAYNRLIELGTRPGTHIRIHTPLIHLDKADII 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+L + + LE + +CY + + R C CP+C +R KG+ E K
Sbjct: 175 RLGLKL------QVPLELTWSCY--RNEDR-----ACGCCPSCRIRLKGFAEVGIK 217
>gi|297621469|ref|YP_003709606.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
86-1044]
gi|297376770|gb|ADI38600.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
86-1044]
Length = 212
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE--CRLCVRKKIVELMPKWK 68
A++L SGG DS+ L+ A LSFDYGQR+KVELE + K+ +++
Sbjct: 3 AIVLLSGGIDSTVVLAMAQSLGRECTALSFDYGQRHKVELEHAAHIAHYYKVPQIIINIS 62
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ E+ L ++ ++ KN + +I +P+T+VP RN +FL +AA A +
Sbjct: 63 PACFENTAL-------VNALNVPKNRTLDEISKGGIPSTYVPARNTLFLAYAAGQAEIMN 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGMESHVT-VHTPLMWLKKYETWK 182
I G D + YPDCR + A + +A G E + + TPL+ K +
Sbjct: 116 AEEIHCGPNLLDRNCYPDCRPEFYSAFQQVLASATKQGAEGNPPRIVTPLINWDKNRIVQ 175
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ +G L+ + +CY G C C AC LRQ+
Sbjct: 176 EGRKLGAP------LDTTFSCY------SPSAGKACGMCDACILRQEA 211
>gi|260222250|emb|CBA31625.1| hypothetical protein Csp_D28060 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 82
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 8/72 (11%)
Query: 174 WLKKYETWKLAQDIG--------GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
W+ K +TW+LA ++G GQ LV+L++E +HTCYLG R R+ WGYGC +CPAC
Sbjct: 5 WINKAQTWELAHELGERSGVPEGGQALVDLVVEHTHTCYLGDRTHRHAWGYGCGTCPACE 64
Query: 226 LRQKGWMEFKEK 237
LR KG+ F +K
Sbjct: 65 LRAKGYAGFVDK 76
>gi|317054937|ref|YP_004103404.1| exsB protein [Ruminococcus albus 7]
gi|315447206|gb|ADU20770.1| exsB protein [Ruminococcus albus 7]
Length = 228
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRK------KIVE 62
AL+LFSGG DS+TCL+ A+ + + V LS YGQ++ E++ V + K ++
Sbjct: 3 ALVLFSGGLDSATCLALAIKKHGKENVTALSVFYGQKHDKEIQAAKNVAEYYGVTLKTLD 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L + DS D L DI H S + ++ D +T+VP RN +FL AA++
Sbjct: 63 LALIFADS---DCSLLSNSDKDIPHESYAEQLSH--TDGKPVSTYVPFRNGLFLASAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A L I G D +G YPDC A+ +AI +G V + P + L K +
Sbjct: 118 AISLDCGVIYYGAHADDAAGNAYPDCSQAFNNAMNSAITIGSGEQVHIEAPFVGLTKADV 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K+ ++G + E + +CY G C C C R +
Sbjct: 178 VKMGTELG------VPYELTWSCYEGGEKP-------CGVCGTCIDRTAAF 215
>gi|18976420|ref|NP_577777.1| succinoglycan biosynthesis regulator [Pyrococcus furiosus DSM 3638]
gi|74537535|sp|Q8U4N3|QUEC_PYRFU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|18891952|gb|AAL80172.1| succinoglycan biosynthesis regulator [Pyrococcus furiosus DSM 3638]
Length = 240
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 36/240 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKVE--LECRLCVRKKIVEL 63
A++LFSGG DS+ CL WA ++D V L+ +YG NKV L VR KIV+L
Sbjct: 5 AVVLFSGGLDSTACLYWAKKQYDEVIMLTVNYGSNEERVTNKVAEYFSKELDVRLKIVKL 64
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN----------TFVPGRNI 113
D L E +I SSL ++ L + ++P RN+
Sbjct: 65 -----DFLKE--------FSEIRGSSLVGGEVPRVTAEELEDIEKASETARSVWIPARNL 111
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
+ + AA+L LG +I++G + + +PD + + + A+ + V V PL+
Sbjct: 112 VLISVAASLLDALGGGDIIVGFNAEEATTFPDNSREFVEKLNEALRFATLNPVKVVAPLI 171
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K KL +++ N E S++CY K C C +C R KG +E
Sbjct: 172 DLDKRGIAKLLKEL------NAKYEYSNSCYNPKGFTEDGRPIHCGECESCVRRHKGLIE 225
>gi|194335950|ref|YP_002017744.1| exsB protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194308427|gb|ACF43127.1| exsB protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 258
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMP 65
P A++L SGG DS + A + + +YGQR + ELE +C I + +
Sbjct: 10 PKAVVLLSGGMDSLVTTAMAHAAGFELAAMHVNYGQRTWQKELESFRSICSHYNIEQRLE 69
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAA 120
D L I SSLT + +M + Q +++P ++VP RN FL A
Sbjct: 70 VNAD-----------FLAQIGGSSLT-DFSMPVGGADLQGSSIPTSYVPFRNAGFLSMAV 117
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
+ + +G + I IG E D SGYPDCR A T I LG E+ + + TPL+ ++K
Sbjct: 118 SWSEVIGASKIFIGAVEEDSSGYPDCRKVFYDAFNTVIVLGTKPETDIAILTPLIEMQKS 177
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + ++ + E S +CY + G C C +C R + +
Sbjct: 178 EIVRKGIEL------QVPFELSWSCYKSE-------GKACGLCDSCARRLRAF 217
>gi|257463608|ref|ZP_05627999.1| queuosine biosynthesis protein QueC [Fusobacterium sp. D12]
gi|317061162|ref|ZP_07925647.1| succinoglycan biosynthesis regulator [Fusobacterium sp. D12]
gi|313686838|gb|EFS23673.1| succinoglycan biosynthesis regulator [Fusobacterium sp. D12]
Length = 231
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 24/230 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCV----RKKIVELMP 65
L+L SGG DS+TCL+ A++++ +V LS YGQ++ EL+ + R +++EL
Sbjct: 4 LVLLSGGIDSTTCLAMAIEKYGVGQVVALSAFYGQKHNKELQAARNIANYYRVELIELNL 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L + +I H S + +A + ++ L +T++P RN +FL AA++A
Sbjct: 64 SKIFAYSNSSLLKHS-GKEIPHCSYVEQLAER-KEKTL-STYIPFRNGLFLSTAASIAIS 120
Query: 126 LGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G D +G YPDC A+ TAI G V V P + L K E KL
Sbjct: 121 KNCSIIFYGAHSDDAAGNAYPDCSPAFHEAMNTAIYEGSGRQVRVEAPFLKLHKKEIVKL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
D+ L E + +CY G Y C C C R+K + E
Sbjct: 181 GLDL------KLPYELTWSCYEGGE-------YPCGQCGTCIDREKAFEE 217
>gi|257460681|ref|ZP_05625782.1| queuosine biosynthesis protein QueC [Campylobacter gracilis RM3268]
gi|257442012|gb|EEV17154.1| queuosine biosynthesis protein QueC [Campylobacter gracilis RM3268]
Length = 391
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 101 NNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
++LP+T+VP RN +FL AA LA + I IGV + D SGYPDC I A E A+ L
Sbjct: 257 SDLPSTYVPFRNGVFLSIAAALAEKERCDAIFIGVVQEDSSGYPDCGASFIAAFERALEL 316
Query: 161 GMES--HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
G H + TPL+ L K + LA +IG + LE + +CY +R+ C
Sbjct: 317 GTSRDFHPRIKTPLVHLSKAQIVSLALEIG------VPLELTWSCY--ERED-----AAC 363
Query: 219 NSCPACYLRQKGW 231
C +C LR KG+
Sbjct: 364 GLCDSCLLRLKGF 376
>gi|71282550|ref|YP_269590.1| exsB protein [Colwellia psychrerythraea 34H]
gi|110816200|sp|Q480C9|QUEC1_COLP3 RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|71148290|gb|AAZ28763.1| exsB protein [Colwellia psychrerythraea 34H]
Length = 218
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A ++++SGG DS T L+ A V LSFDYGQR+ ELEC V K++
Sbjct: 2 AEKVVVIYSGGMDSFTVLNRAKKDGKEVFALSFDYGQRHVKELECASIVCKEL------- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ I AI ++ SSLT ++ + + ++ +T VP RN+I L A A
Sbjct: 55 --AVNHKVIDISAINQLLAGSSLTDDIDIPEGHYEAESMKSTVVPNRNMILLSLAVAYAV 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G + G D++ YPDCR + + + + V + +P + + K T LA
Sbjct: 113 SVGAEQVYYGAHSGDHAIYPDCRPEFVEKMNDVCKIANYESVEIFSPYLSVDK--TAILA 170
Query: 185 QDIG-GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
I G D N + TCY G+ C C +C R + + E
Sbjct: 171 DGIKMGLDYSN-----TWTCYNGREK-------ACGKCGSCQERLEAFEE 208
>gi|332140738|ref|YP_004426476.1| putative regulator protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|254764297|sp|B4RTX3|QUEC_ALTMD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|327550760|gb|AEA97478.1| putative regulator protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 218
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 37/231 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVEL 63
+ ++++SGG DS T L AL +V LSFDYGQR+K EL+ L V KIV++
Sbjct: 4 NVVVIYSGGMDSFTVLHKALRAGKKVHALSFDYGQRHKKELDYAAAVCTSLGVPHKIVDI 63
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAA 120
AI I S+LT ++ + ++ ++ T VP RN+I L A
Sbjct: 64 S---------------AINTLIGGSALTSDIDVPEGHYEEPSMKQTVVPNRNMILLSLAV 108
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A L + G D++ YPDCR + + + + + VT+ TP ++K +T
Sbjct: 109 GYAVSLDANEVYYGAHSGDHAIYPDCRPEFVHKMNDVCGIANYTPVTIMTP--YIKDSKT 166
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L + + L ++ TCY G+ C C AC R + +
Sbjct: 167 AILTDGLS----MGLDYGQTWTCYNGREK-------ACGKCGACEERLEAF 206
>gi|56750230|ref|YP_170931.1| transcription regulator [Synechococcus elongatus PCC 6301]
gi|81300142|ref|YP_400350.1| ExsB [Synechococcus elongatus PCC 7942]
gi|81596804|sp|Q5N5K7|QUEC_SYNP6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816270|sp|Q31NK6|QUEC_SYNE7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56685189|dbj|BAD78411.1| transcription regulator [Synechococcus elongatus PCC 6301]
gi|81169023|gb|ABB57363.1| ExsB [Synechococcus elongatus PCC 7942]
Length = 231
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 32/232 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------VEL 63
A++L SGG DS+T + A+ LSF YGQR+ ELE V + V++
Sbjct: 4 AVVLLSGGLDSATAAAQAIADGYEAIALSFRYGQRHVRELEAARSVAAALGINQHFFVDV 63
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +W S D PL G ++ +P+T+VPGRN +F+ A +L
Sbjct: 64 NIAQWGGSSLTDAAEPLPGSGVVA--------------GEIPSTYVPGRNTVFIALALSL 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + I +G+ DYSGYPDCR D + A + +L + V P + K
Sbjct: 110 AEAQQASAIYLGINAVDYSGYPDCRPDYLAAFQQLASLSSKVGVEGQAPQLVAPLIHDHK 169
Query: 183 LAQDIGGQDLV-NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ DI + +V + + + +CY G + C C +C +R + +E
Sbjct: 170 V--DIVRRAVVLGVPIPATWSCYAGGAEA-------CGRCDSCRIRDRALIE 212
>gi|78186427|ref|YP_374470.1| ExsB [Chlorobium luteolum DSM 273]
gi|110816240|sp|Q3B5F4|QUEC_PELLD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78166329|gb|ABB23427.1| ExsB [Chlorobium luteolum DSM 273]
Length = 227
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 29/228 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKD 69
A+LL SGG DS + A + + +YGQR + EL+ +
Sbjct: 3 AVLLLSGGMDSLVTTAIAHREGYELAAMHVNYGQRTWQKELQSFRSIADHY--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
S+ E + LG I SSLT + ++ + +P ++VP RN FL A + +
Sbjct: 54 SITERLEVNADFLGRIGGSSLTDHSMPVAGADLRGSGIPTSYVPFRNACFLSMAVSWSEV 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
+G + IG E D SGYPDCR A I LG E+ +T+ TPL+ ++K + +
Sbjct: 114 IGAERLFIGAVEEDSSGYPDCRRVFYDAFNRVIELGTRPETGITILTPLIAMQKAQIVRN 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G E S +CY + G C C +C R + +
Sbjct: 174 GMELGAP------FEHSWSCYRSE-------GRACGVCDSCARRLRAF 208
>gi|187736368|ref|YP_001878480.1| exsB protein [Akkermansia muciniphila ATCC BAA-835]
gi|187426420|gb|ACD05699.1| exsB protein [Akkermansia muciniphila ATCC BAA-835]
Length = 223
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 103/234 (44%), Gaps = 44/234 (18%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRN-KVELECRLCVRKKIVELMPKWKD- 69
+L SGG DSS L WA R RV LSFDY + + EL+C W+
Sbjct: 8 VLLSGGLDSSVALHWA-HRNHRVRVALSFDYASNHAERELKC------------AAWQAA 54
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN----------TFVPGRNIIFLVFA 119
SLG +H + DIS S A+ +++P+ T VP RN IFL A
Sbjct: 55 SLGIEHRVI-----DISSISSHLKSALLSGADDIPDGSYDEELMKQTVVPFRNGIFLSIA 109
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A +A G +VI D+S YPDCR + + A+ AI LG + + + P + + K
Sbjct: 110 AGVAESCGAQQLVIAAHSGDHSIYPDCREEFMAAMTEAIRLGTYAGLGILRPFIHMSKGG 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ QD+G + +++CY G C C C R++ + E
Sbjct: 170 IAAMGQDLG------VDFSRTYSCYKGG-------AVHCGVCSTCMERREAFRE 210
>gi|156937660|ref|YP_001435456.1| exsB protein [Ignicoccus hospitalis KIN4/I]
gi|156566644|gb|ABU82049.1| exsB protein [Ignicoccus hospitalis KIN4/I]
Length = 260
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 112/252 (44%), Gaps = 58/252 (23%)
Query: 14 LFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK---------KIVE 62
L SGG DS+T + A+++F D L+ YGQR+ EL+ V K + +
Sbjct: 6 LVSGGMDSATAFADAINKFNPDVKVALTVVYGQRHARELKAAAEVAKFYGAQHLVVDLSD 65
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L K K+ A+LG A ++ +P T+VP RN + L A +
Sbjct: 66 LFEKVKEV--------SALLGGRGVPE-----AEELVPGLVPPTYVPQRNAVLLASAGAI 112
Query: 123 AYRL------GITNIVIGVCETDYSG----YPDCRHDTIRAIETAIN-----------LG 161
+L G+ I +G TDY+ YPD R + + A+E A+N G
Sbjct: 113 LEKLMIERNDGLGVISVGFHGTDYAPGEPVYPDTRPEFVEAMERALNEGSSVVFNFKRAG 172
Query: 162 MESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSC 221
E+ +T++ P + LKK + K A ++G + LE + TCY G C +C
Sbjct: 173 REAKITIYAPFVRLKKKDVVKRALELG------VPLELTWTCYRGGDRP-------CGTC 219
Query: 222 PACYLRQKGWME 233
PAC R + +ME
Sbjct: 220 PACVSRLRAFME 231
>gi|126642577|ref|YP_001085561.1| hypothetical protein A1S_2542 [Acinetobacter baumannii ATCC 17978]
Length = 190
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 29/199 (14%)
Query: 42 YGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQ- 99
YGQR+ EL+ + ++ G +H + L ++ S+LT N+A+ Q
Sbjct: 2 YGQRSTTELDAAKALAQR-----------AGVEHRVINIDLANLGGSALTDHNIAVPEQL 50
Query: 100 DNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN 159
+P T+VP RN IFL +A A IVIG+ DYSGYPDCR + I A
Sbjct: 51 QEGIPVTYVPARNTIFLSYALAAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMAR 110
Query: 160 LGMESHV-----TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEW 214
L ++ V TPL+ L K +L + G + ++ +CY
Sbjct: 111 LATKAGVEGKPLKFETPLLHLSKANIIRLGIEHG------VDYSQTVSCYQAD-----AQ 159
Query: 215 GYGCNSCPACYLRQKGWME 233
G C C +C LR++G+++
Sbjct: 160 GRACGKCDSCRLRKEGFID 178
>gi|11498054|ref|NP_069278.1| succinoglycan biosynthesis regulator (exsB) [Archaeoglobus fulgidus
DSM 4304]
gi|74514120|sp|O29807|QUEC_ARCFU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|2650185|gb|AAB90792.1| succinoglycan biosynthesis regulator (exsB) [Archaeoglobus fulgidus
DSM 4304]
Length = 239
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 24/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DSST L + LD V L+F YGQ++ E+E V K K S
Sbjct: 3 AVMLLSGGIDSSTLLYYLLDGGYEVHALTFFYGQKHSKEIESAEKVAKAAKVRHLKVDIS 62
Query: 71 LGEDHILPLAILGD--ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D I A+ G+ + + ++ V + T VP RN+I L AA A ++G
Sbjct: 63 TIHDLISYGALTGEEEVPKAFYSEEVQRR--------TIVPNRNMILLSIAAGYAVKIGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWKLAQDI 187
+ +DYS YPDCR + ++A++TA+ L + + V V P + + K + +L +
Sbjct: 115 KEVHYAAHLSDYSIYPDCRKEFVKALDTAVYLANIWTPVEVRAPFVDMTKADIVRLGLKL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
G + E + +CY G C SC C R + ++
Sbjct: 175 G------VPYELTWSCYEGGDRP-------CLSCGTCLERTEAFL 206
>gi|284161581|ref|YP_003400204.1| exsB protein [Archaeoglobus profundus DSM 5631]
gi|284011578|gb|ADB57531.1| exsB protein [Archaeoglobus profundus DSM 5631]
Length = 233
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSST L + + R+D + +++ YGQR+ E+E K++ + K + +
Sbjct: 1 MSGGIDSSTLLWYLMKRYDEIYVITYIYGQRHAREVE-----HAKMIVEKAREKAKIHHE 55
Query: 75 HILPLAILGDISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
I I+ +LT N + D + T VP RN+I L A A ++G +
Sbjct: 56 IADISCIQRLIAKGALTGNEEVPEGFYTDESQKKTIVPNRNMILLAIAVGYAVKVGEREV 115
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
++DY+ YPDCR + ++A++TA+ L + V + P + + K + KL +G
Sbjct: 116 YYAAHKSDYATYPDCRKEFVKALDTAVYLATIFDPVVIKAPFVDMTKADIVKLGLKLG-- 173
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ E + +CY G+ C C C R + ++
Sbjct: 174 ----VPYELTWSCYRGEERP-------CLRCGTCLERTEAFL 204
>gi|126665592|ref|ZP_01736574.1| Predicted PP-loop superfamily ATPase [Marinobacter sp. ELB17]
gi|126630220|gb|EBA00836.1| Predicted PP-loop superfamily ATPase [Marinobacter sp. ELB17]
Length = 222
Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 44/241 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVEL 63
+ ++++SGG DS T L A V +SF+YGQR+ EL+C RL V K++++
Sbjct: 4 TVVVIYSGGMDSFTLLHKARADGLNVHAISFNYGQRHVRELDCAQEVCQRLAVPHKVIDI 63
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVF 118
+GD+ S + + + Q+ + +T VP RN+I L
Sbjct: 64 RA----------------MGDVMAGSALTSETIDVPEGDYQEGAMKSTVVPNRNMILLAL 107
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A A + + + G D++ YPDCR + + ++ + V V P M K
Sbjct: 108 ATGYAVTVEASAVWFGAHGGDHAIYPDCRPEFVAKMDAVCKVANYQPVAVEAPFMHFTKG 167
Query: 179 ETWKLAQDIGGQDLVNLILEESH--TCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ L + L L+ SH TCY G+ C C +C R + + E ++
Sbjct: 168 DILALG--------LQLNLDYSHTWTCYNGRSK-------ACGRCSSCVERLQAFAEHQQ 212
Query: 237 K 237
+
Sbjct: 213 Q 213
>gi|240102410|ref|YP_002958719.1| Transcription regulator, putative, ExsB family (ExsB) [Thermococcus
gammatolerans EJ3]
gi|239909964|gb|ACS32855.1| Transcription regulator, putative, ExsB family (ExsB) [Thermococcus
gammatolerans EJ3]
Length = 239
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKVE--LECRLCVRKKIVEL 63
A++LFSGG DS+ CL WA +D V L +YG N+V L V KIV L
Sbjct: 4 AVVLFSGGLDSTACLYWAKKHYDEVMMLVINYGSNEERVTNRVAEFFSKELNVPLKIVRL 63
Query: 64 MPKWKDSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
D L E L L G+ S+ + + + +VP RN++ + AA+
Sbjct: 64 -----DFLEEFSKLRGTTLVGGETPRVSVKELEDENVAQETAKSVWVPARNLVLISVAAS 118
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L LG +IV+G + +PD + + + A+ G + V V PL+ L K
Sbjct: 119 LLDALGGGDIVVGFNAEEGVTFPDNTPEFVEKMNEALKYGTMAEVKVVAPLIDLDKRGIA 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +++ N E S++CY+ K C C +C R +G +E
Sbjct: 179 RLLKEL------NAKYEYSNSCYMPKGFTEDGKPIHCGQCESCVRRHRGLIE 224
>gi|332993961|gb|AEF04016.1| putative regulator protein [Alteromonas sp. SN2]
Length = 218
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-----CR-LCVRKKIVEL 63
+ ++++SGG DS T L AL V LSFDYGQR+K EL+ C+ L V KIV++
Sbjct: 4 NVVVIYSGGMDSFTVLHKALRDGKTVHALSFDYGQRHKKELDYAAAVCKSLNVPHKIVDI 63
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAA 120
AI I SSLT ++ + ++ ++ T VP RN+I L A
Sbjct: 64 S---------------AINSLIGGSSLTSDIDVPEGHYEEPSMKQTVVPNRNMILLSLAV 108
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A L + G D++ YPDCR + + + + + V + TP ++K +T
Sbjct: 109 GYAVSLEANEVYYGAHSGDHAIYPDCRPEFVEKMSDVCRIANYTPVEIVTP--YIKDSKT 166
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L + + L E+ TCY G+ C C AC R + + E
Sbjct: 167 AILTDGLK----MGLDYGETWTCYNGREK-------ACGKCGACEERLEAFRE 208
>gi|308050952|ref|YP_003914518.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
gi|307633142|gb|ADN77444.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
Length = 220
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 39/232 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVELM 64
A++++SGG DS T L + ++FDYGQR+ E+E L + KI+++
Sbjct: 5 AVVIYSGGMDSFTVLHKVITEGYTPYAITFDYGQRHDKEVEYAKVVCSELGINHKIIDIT 64
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFA 119
AI IS SSLT++ I ++N+ +T VP RN+I + A
Sbjct: 65 ---------------AINQLISGSSLTRDSESDIPEGHYAEDNMKSTVVPNRNMILISLA 109
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A +G + G D++ YPDCR + + I A + + V +P ++ K E
Sbjct: 110 TGYAASIGAGKVFYGAHSGDHAIYPDCRPEFVEKINAATMIANYEPIEVVSPYLYQSKIE 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++G L ++ TCY G+ C C +C R + +
Sbjct: 170 ILKDGLEMG------LDYGKTWTCYNGREK-------ACGRCGSCVERLESF 208
>gi|149377360|ref|ZP_01895105.1| Predicted PP-loop superfamily ATPase [Marinobacter algicola DG893]
gi|149358372|gb|EDM46849.1| Predicted PP-loop superfamily ATPase [Marinobacter algicola DG893]
Length = 221
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 25/225 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ ++++SGG DS T L A R RV LSFDYGQR+ ELEC +++ E +
Sbjct: 4 TVVVIYSGGMDSFTLLHLARARGYRVHALSFDYGQRHVRELEC----ARQVCEAL----- 54
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
S+ I A+ ++ S+LT V + +++N+ T VP RN+I L A A
Sbjct: 55 SVPHKVIDIRALSEVMAGSALTDAVDVPEGHYEEDNMKATVVPNRNMILLSLATGYAVTA 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G + G D++ YPDCR + + ++ + V + P M K
Sbjct: 115 GAVAVWYGAHGGDHAIYPDCRPEFVEKMDAVCQVANYEPVKIEAPFMGSDKGAILAEGLK 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L + TCY G RD+ C C +C R + +
Sbjct: 175 LG------LDYSRTWTCYNG-RDR------ACGVCGSCVERLEAF 206
>gi|284164675|ref|YP_003402954.1| exsB protein [Haloterrigena turkmenica DSM 5511]
gi|284014330|gb|ADB60281.1| exsB protein [Haloterrigena turkmenica DSM 5511]
Length = 243
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 33/231 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T A DR + L YGQR + ELEC + D
Sbjct: 18 AVILLSGGMDSATAAYEARDRGYELYALHTSYGQRTEDRELECAR-----------RLAD 66
Query: 70 SLGEDHILPLAI--LGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
L L + L I SSLT + ++ + +P ++VP RN L A + A
Sbjct: 67 ELDAADFLQIETGHLSAIGASSLTDDEMAVADADMESDEIPTSYVPFRNANLLAMAVSYA 126
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
+ IG D+SGYPDCR + A E +++G E+ +++ P + K +
Sbjct: 127 EANDCEAVFIGAHSEDFSGYPDCRPEFFEAFENVVDVGTKPETDISIEAPFVEWSKTDIA 186
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ D+ + E + +CY E C +C AC R + +
Sbjct: 187 ERGVDL------EVPYEHTWSCYR-------ENEPACGTCDACAFRLQAFQ 224
>gi|119357731|ref|YP_912375.1| exsB protein [Chlorobium phaeobacteroides DSM 266]
gi|167016422|sp|A1BHS4|QUEC_CHLPD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119355080|gb|ABL65951.1| exsB protein [Chlorobium phaeobacteroides DSM 266]
Length = 226
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS + A + + + +YGQR ELE +
Sbjct: 3 AVVLLSGGMDSLVTTAIANAQGFELAAMHVNYGQRTWHKELEAFRLIADHY--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAY 124
++GE + L I SSLT + +M I Q ++P ++VP RN FL A + A
Sbjct: 54 AIGERLEINADYLAQIGGSSLT-DYSMPISGADLQGLSIPTSYVPFRNAGFLSMAVSWAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
+G I IG E D SGYPDCR A I LG E+ + + TPL+ ++K E +
Sbjct: 113 VIGAERIFIGAVEEDSSGYPDCRKVFYDAFNAVIALGTKPETSIAIMTPLIEMQKSEIVR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++ E S +CY + G C C +C LR + +
Sbjct: 173 KGMELTAP------FELSWSCYKSE-------GKACGVCDSCALRLRAF 208
>gi|94500712|ref|ZP_01307242.1| putative regulator protein [Oceanobacter sp. RED65]
gi|94427267|gb|EAT12247.1| putative regulator protein [Oceanobacter sp. RED65]
Length = 220
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVELM 64
A++++SGG DS T L+ + V L+F+YGQ++ E+E +L V KI+++
Sbjct: 6 AVVIYSGGMDSFTLLNKVVKEGYDVYALTFNYGQKHVKEVEVAKTVCQQLNVPHKILDIS 65
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAAT 121
P I + SSL + + + N+ +T VP RN+I L A
Sbjct: 66 P---------------INELMQSSSLVGSEEVPEGHYEAENMKSTVVPNRNMILLSLAIG 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + + + G D++ YPDCR + + A+ + HV++ TP + K E
Sbjct: 111 YAVDIKASKVYYGAHSGDHAIYPDCRPEFVHAMNAVAGIANYEHVSIETPYLNSSKGEIL 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K +G L E + TCY G+ C C AC R + + E
Sbjct: 171 KDGLSMG------LSYEHTWTCYNGREK-------ACGKCGACVERLEAFEE 209
>gi|56460022|ref|YP_155303.1| PP-loop superfamily ATPase [Idiomarina loihiensis L2TR]
gi|81362360|sp|Q5QUZ6|QUEC_IDILO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56179032|gb|AAV81754.1| Predicted PP-loop superfamily ATPase [Idiomarina loihiensis L2TR]
Length = 218
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 37/229 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLC----VRKKIVELMP 65
++++SGG DS T L AL + V LSF+YGQR+ ELE +C + K+V++
Sbjct: 6 VVIYSGGMDSFTVLHRALAEGNEVLALSFNYGQRHVKELEVAGNVCKQHGIPHKVVDIT- 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
AI +S SSLT ++ + ++ ++ +T VP RN+I L A
Sbjct: 65 --------------AINSLLSGSSLTDDIDIPEGHYEEESMKSTVVPNRNMILLSLAIGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + + G D++ YPDCR + +R ++ + V VH P + + K
Sbjct: 111 AVSEEASAVYYGAHSGDHAIYPDCRPEFVRQMDVVSKMANYEPVAVHAPYLDVDKNAILA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L ++ TCY G RDK C C AC R + +
Sbjct: 171 DGIKMG------LDYSQTWTCYNG-RDK------ACGKCGACQERLEAF 206
>gi|323143038|ref|ZP_08077744.1| protein ExsB [Succinatimonas hippei YIT 12066]
gi|322417232|gb|EFY07860.1| protein ExsB [Succinatimonas hippei YIT 12066]
Length = 230
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 39/237 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL+L SGG DS+TCL++A+D+ + V ++S YGQ++K EL+C +L +K
Sbjct: 4 ALVLSSGGVDSTTCLAFAVDKLGAENVSSVSIFYGQKHKKELQC-------AAQLADYYK 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---------NTFVPGRNIIFLVFA 119
E L L+++ S+ +L +N + I++ + NT+VP RN +FL
Sbjct: 57 VKHYE---LDLSMMFKNSNCALLENSSQDIEEGSYSTQIAVHGKVNTYVPFRNGLFLASV 113
Query: 120 ATLA---YRLGITNIVIGVCETDYS--GYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A+LA Y I +G D + Y DC + I A+ AI+LG S + P
Sbjct: 114 ASLAGSIYPDDEVEIYLGAHADDAALNAYADCSMEFIEAMNKAISLGTYSKERIVAPFAG 173
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K E K + + E + +CY GK DK C C C R+K +
Sbjct: 174 QNKAEVVKTGLKL------KVPYEMTWSCYEGK-DKP------CGKCATCIDRRKAF 217
>gi|315126984|ref|YP_004068987.1| regulator protein [Pseudoalteromonas sp. SM9913]
gi|315015498|gb|ADT68836.1| regulator protein [Pseudoalteromonas sp. SM9913]
Length = 218
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 37/229 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVELMP 65
++++SGG DS T L+ AL + V LSFDYGQR+ EL+ +L V KIV++
Sbjct: 6 VVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAASVCEKLNVPHKIVDIS- 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
AI I SSLT ++ + ++ ++ +T VP RN+I L A
Sbjct: 65 --------------AINQLIGGSSLTDDIDVPEGHYEEESMKSTIVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + + G D++ YPDCR + ++ ++ + V + +P + K +
Sbjct: 111 AVSLKASKVYYGAHSGDHAIYPDCRPEFVKKMDDVCRIANYDAVEIFSPYLNNTKIDILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L ++ TCY G RDK C C AC R + +
Sbjct: 171 DGIKMG------LDYSQTWTCYNG-RDK------ACGKCGACQERLEAF 206
>gi|21673367|ref|NP_661432.1| ExsB protein [Chlorobium tepidum TLS]
gi|81791733|sp|Q8KF00|QUEC_CHLTE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21646463|gb|AAM71774.1| exsB protein [Chlorobium tepidum TLS]
Length = 227
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPKW 67
A+LL SGG DS + A + + +YGQR + ELEC ++CV IV
Sbjct: 3 AVLLVSGGMDSLVATALAHREGLELAAMHVNYGQRTWQKELECFRQICVHYGIV------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D L D + AI G + + ++P ++VP RN FL A + + +G
Sbjct: 57 -DRLEVDAMFLSAIGGSSLTDATIPVGPADLAGTDIPTSYVPFRNANFLSMAVSWSEVIG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQ 185
I IG E D SGYPDCR A I G E+ + + TPL+ + K E +
Sbjct: 116 ANRIYIGAVEEDSSGYPDCRKVFYDAFNQVIEHGTRPETRIEIVTPLIAMSKAEIVRRGM 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++ + S +CY + G C C +C R + +
Sbjct: 176 EL------DAPFHFSWSCYKSE-------GKACGVCDSCARRLRAF 208
>gi|119469470|ref|ZP_01612374.1| putative regulator protein [Alteromonadales bacterium TW-7]
gi|119447005|gb|EAW28275.1| putative regulator protein [Alteromonadales bacterium TW-7]
Length = 218
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVELMP 65
++++SGG DS T L+ AL + V LSFDYGQR+ EL+ +L V KIV++
Sbjct: 6 VVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAAQVCEKLNVPHKIVDIS- 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
AI I SSLT N+ + ++ ++ +T VP RN+I L A
Sbjct: 65 --------------AINQLIGGSSLTDNIDVPEGHYEEESMKSTIVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + + G D++ YPDCR + ++ ++ + V + +P + K +
Sbjct: 111 AVSLKASQVYYGAHSGDHAIYPDCRPEFVQKMDDVCRIANYDAVEIFSPYLNNTKIDILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L ++ TCY G+ C C AC R + +
Sbjct: 171 DGIKMG------LDYSQTWTCYNGREK-------ACGKCGACQERLEAF 206
>gi|85711960|ref|ZP_01043014.1| Predicted PP-loop superfamily ATPase [Idiomarina baltica OS145]
gi|85694146|gb|EAQ32090.1| Predicted PP-loop superfamily ATPase [Idiomarina baltica OS145]
Length = 219
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++++SGG DS T L+ AL++ V LSF+YGQR+ EL+ V K+ E + ++
Sbjct: 6 VVIYSGGMDSFTVLNRALEQGHEVSALSFNYGQRHVRELD----VAAKVCEAL-----NI 56
Query: 72 GEDHILPLAILGDISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ AI ++ SSLT ++ + +++++ +T VP RN+I L A A G
Sbjct: 57 PHKIVDITAINTLLAGSSLTDDIEIPEGHYEESSMKSTVVPNRNMILLSLAIGYAVSEGA 116
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ + G D++ YPDCR + +R + L V V P + + K LA +
Sbjct: 117 SAVYYGAHSGDHAIYPDCRPEFVRQMNVVSQLANYEPVEVVAPYLDVDK--NAILADGL- 173
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++L ++ TCY G RDK C C AC R + +
Sbjct: 174 ---RMDLNYADTWTCYNG-RDK------ACGKCGACVERLEAF 206
>gi|212224412|ref|YP_002307648.1| Hypothetical transcription regulator [Thermococcus onnurineus NA1]
gi|212009369|gb|ACJ16751.1| Hypothetical transcription regulator [Thermococcus onnurineus NA1]
Length = 239
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 20/232 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKVE--LECRLCVRKKIVEL 63
A++LFSGG DS+ CL WA +D V L+ +YG N+V L V KIV L
Sbjct: 4 AVVLFSGGLDSTACLYWAKRNYDEVIMLTVNYGSNEEKVTNRVAEFFSKELDVPLKIVRL 63
Query: 64 MPKWKDSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
D L E L L G+ + + M + + +VP RN++ + AA+
Sbjct: 64 -----DFLEEFSKLRGTTLVGGETPKVTAEELEDMGVAQETAKSVWVPARNVVLISVAAS 118
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L LG +I++G + + +PD + + + + G + V V PL+ L K
Sbjct: 119 LLDALGGGDIIVGFNAEEGATFPDNTPEFVERMNEMLKYGAMAEVRVVAPLIDLDKKGIA 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +++ + E S++CY+ K C C +C R +G ME
Sbjct: 179 ELLKELDAK------YEYSNSCYMPKGFTEDGKPIHCGECESCVRRHRGLME 224
>gi|94971670|ref|YP_593718.1| ExsB [Candidatus Koribacter versatilis Ellin345]
gi|94553720|gb|ABF43644.1| ExsB [Candidatus Koribacter versatilis Ellin345]
Length = 257
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 35/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVE-------LECRLCVRKKIV 61
A+++ SGG DS+ C + A+ + + + L YGQR + RL ++ ++
Sbjct: 31 AVVVLSGGMDSTVCATLAVREYGAENIGALHVSYGQRTAAREKQAFAAVAERLGIQTRLA 90
Query: 62 ELMPKWKDSLGEDHILPLAILGD-ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
P ++ AI G ++ +++ A ++ + +P T+VP RN L A
Sbjct: 91 VETPFFR-----------AIGGSALTDANIAVPDAGELIGHEIPVTYVPFRNAHLLAMAV 139
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYE 179
+ A LG + I IG D SGYPDCR + A A+ G ++ + V TPL+ L+K+E
Sbjct: 140 SWAEVLGASKIYIGAVAQDSSGYPDCRPEFYEAYNLAVRRGTKAGDIEVVTPLIALRKHE 199
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L ++G + + +CY + D C C +C LR + +
Sbjct: 200 IVSLGLELGAP------FDLTWSCY-SRED------CACGVCDSCVLRLRAF 238
>gi|118574280|sp|Q1IHK6|QUEC_ACIBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 237
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVE-------LECRLCVRKKIV 61
A+++ SGG DS+ C + A+ + + + L YGQR + RL ++ ++
Sbjct: 11 AVVVLSGGMDSTVCATLAVREYGAENIGALHVSYGQRTAAREKQAFAAVAERLGIQTRLA 70
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAM----KIQDNNLPNTFVPGRNIIFL 116
P ++ I S+LT N+A+ ++ + +P T+VP RN L
Sbjct: 71 VETPFFRA---------------IGGSALTDANIAVPDAGELIGHEIPVTYVPFRNAHLL 115
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWL 175
A + A LG + I IG D SGYPDCR + A A+ G ++ + V TPL+ L
Sbjct: 116 AMAVSWAEVLGASKIYIGAVAQDSSGYPDCRPEFYEAYNLAVRRGTKAGDIEVVTPLIAL 175
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+K+E L ++G + + +CY + D C C +C LR + +
Sbjct: 176 RKHEIVSLGLELGAP------FDLTWSCY-SRED------CACGVCDSCVLRLRAF 218
>gi|109899268|ref|YP_662523.1| exsB protein [Pseudoalteromonas atlantica T6c]
gi|123064352|sp|Q15RL9|QUEC_PSEA6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|109701549|gb|ABG41469.1| preQ(0) biosynthesis protein QueC [Pseudoalteromonas atlantica T6c]
Length = 218
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 33/227 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE--CRLCVRKKIVELMPKWKD 69
+++FSGG DS T L+ A+ V LSF+YGQR+ EL+ R C+
Sbjct: 6 VVIFSGGMDSFTVLNMAVKEGYEVHALSFNYGQRHSKELDYASRACI------------- 52
Query: 70 SLGEDH-ILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+LG H I+ ++ + + I SSLT +V + + ++ +T VP RN+I L A A
Sbjct: 53 TLGVAHKIIDISAINELIGGSSLTSDVDIPEGHYAEESMKSTVVPNRNMILLSMAVGYAV 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
L + G D+ YPDCR + + + + V + +P ++ K +
Sbjct: 113 SLDANKVYYGAHSGDHDIYPDCRPEFVERMNDVCAIANYEKVEIVSPFLYQSKIDILTAG 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G L + TCY G+ C C AC R + +
Sbjct: 173 LNMG------LDYNLTWTCYNGREK-------ACGKCGACQERLEAF 206
>gi|239996402|ref|ZP_04716926.1| putative regulator protein [Alteromonas macleodii ATCC 27126]
Length = 218
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-----CR-LCVRKKIVEL 63
+ ++++SGG DS T L AL +V LSF+YGQR+K EL+ C L V KIV++
Sbjct: 4 NVVVIYSGGMDSFTVLHKALKAGKKVHALSFNYGQRHKKELDYAANVCNSLNVPHKIVDI 63
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAA 120
AI I S+LT ++ + ++ ++ T VP RN+I L A
Sbjct: 64 S---------------AINTLIGGSALTSDIEVPEGHYEEPSMKQTVVPNRNMILLSLAV 108
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A L + G D++ YPDCR + + + + + VT+ TP ++ +T
Sbjct: 109 GYAVSLDANEVYYGAHSGDHAIYPDCRPEFVHKMNDVCGIANYTPVTIMTP--YIDDSKT 166
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L + + L ++ TCY G+ C C AC R + + E
Sbjct: 167 AILTDGLS----MGLDYGQTWTCYNGREK-------ACGKCGACEERLEAFKE 208
>gi|303244970|ref|ZP_07331294.1| exsB protein [Methanothermococcus okinawensis IH1]
gi|302484681|gb|EFL47621.1| exsB protein [Methanothermococcus okinawensis IH1]
Length = 233
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 27/235 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS + A ++ ++FDYGQR + + KK+ E+
Sbjct: 3 AVCILSGGLDSVVSMMVAKKETSKLYAITFDYGQRAVLR---EINASKKVSEI------- 52
Query: 71 LGEDH-ILPLAILGDISHSSLTKNVAM-KIQDNNLPN----------TFVPGRNIIFLVF 118
LG H ++ L + + S+S+LTK+ + I+++ L N +VP RN+I
Sbjct: 53 LGAQHKVIKLPFIKEFSNSALTKDKNIPTIKEHELDNIEKATETMKSVWVPARNMILFSI 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A+ A +G I G+ + + +PD + I + G + V + PL L K
Sbjct: 113 ASGFAEFIGADEIYTGLNREEGTTFPDNTKEFIDRFNNVLEYGTLNKVKMRAPLYNLNKT 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E KL + + +DL +L+ S++CY RD ++ + C C +C R++ + E
Sbjct: 173 EIVKLGKKL-EKDLGLEVLKYSYSCY---RDNGEDFLH-CGKCESCMRRKRAFKE 222
>gi|327400840|ref|YP_004341679.1| exsB protein [Archaeoglobus veneficus SNP6]
gi|327316348|gb|AEA46964.1| exsB protein [Archaeoglobus veneficus SNP6]
Length = 211
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLC----VRKKIVEL- 63
+ + SGG DS ++ AL L+FDYGQ + ++E +LC V K++EL
Sbjct: 4 VAVLSGGMDSGVAMAKALQEGSIELALTFDYGQMAAKKEIEYAGKLCKYYGVAHKVIELP 63
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ L E I +++ + + + +VP RN++F+ AA
Sbjct: 64 WLANLSSGLTEGRI-----------PEVSEEILEAVAEETAKAVWVPNRNMVFISIAAAF 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A +G +V+G + +PD + ++A+ A+ + + V+V+ PL+ L K E K
Sbjct: 113 AESMGCNAVVVGFNGEEAQTFPDNSEEFVKAMNDALRI--VNGVSVYAPLIKLDKTEIVK 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L + N E + +CY Y + C C +C RQ+ +
Sbjct: 171 LGMSM------NFPFELTWSCY-------YSYDEPCGKCESCVRRQRAF 206
>gi|298250153|ref|ZP_06973957.1| exsB protein [Ktedonobacter racemifer DSM 44963]
gi|297548157|gb|EFH82024.1| exsB protein [Ktedonobacter racemifer DSM 44963]
Length = 252
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 26/237 (10%)
Query: 6 KKAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
++ SA+L+ SGG DS + A FD + LSF+YGQ++ EL + I L
Sbjct: 5 RRGESAVLIVSGGMDSCVLSHYYAAAGFD-LHLLSFNYGQKHVKEL---TYAERYISALR 60
Query: 65 PKWKDSLGEDHI--LPLAILGDISHSSL-TKNVAM---KIQDNNLPNTFVPGRNIIFLVF 118
++ + + + LP+A L S S+L + +M D+++ T VP RN L+
Sbjct: 61 ERYSNLEIQHQVVALPIAHLSPNSGSALLNPDQSMPHGHYTDDSMKATVVPYRNPNMLLQ 120
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKK 177
AAT+A+ + DY+ YPDCR + + A T +N M+S VTV P M K
Sbjct: 121 AATVAWNENARVVAFAAHYGDYAQYPDCRQEFVDAFNTMLNRAMDSDQVTVEVPFMRFSK 180
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG---CNSCPACYLRQKGW 231
+ + + ++ E + +CY G + G+G C C C R + +
Sbjct: 181 AQIARFGASL------DVPFELTWSCYEGGSE-----GFGDKHCGHCGTCVERYEAF 226
>gi|91200479|emb|CAJ73527.1| similar to PP-loop ATPase family including transcriptional
regulator ExsB [Candidatus Kuenenia stuttgartiensis]
Length = 225
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 105/237 (44%), Gaps = 30/237 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVEL 63
+K +A++L SGG DS + A + +D + L +YGQR + EL E+
Sbjct: 1 MKGKDTAIVLASGGLDSCVTAAIANETYD-LALLHINYGQRTESKELSA-------FHEI 52
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVF 118
+K + I + L I SSLT + + +Q+ +P T+VP RN +FL
Sbjct: 53 AAYYKVPAEQILIANIDYLKKIGGSSLT-DTMIPVQEAEPDSKEIPTTYVPFRNTLFLSV 111
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLK 176
A + A +G + IG D GYPDC+ I+ G E+ + V TPL++
Sbjct: 112 AVSWAEVIGAEKVFIGAVSHDTPGYPDCKPFYYEVFNKLIDAGTKPETRIAVETPLIFKT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K E L + L S +CY DK C C +CYLR+K + E
Sbjct: 172 KAEIVTLGISLKAP------LHLSWSCY-KNTDK------ACGVCNSCYLRRKAFEE 215
>gi|229823793|ref|ZP_04449862.1| hypothetical protein GCWU000282_01095 [Catonella morbi ATCC 51271]
gi|229786832|gb|EEP22946.1| hypothetical protein GCWU000282_01095 [Catonella morbi ATCC 51271]
Length = 217
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+L SGG DSST L+ AL R +V +S Y Q++ + G
Sbjct: 4 VLLSGGADSSTALALALSRDPQVVAVSIAYNQQHAQAELAAAKAVAQ----------HYG 53
Query: 73 EDH-ILPLAILGDISHSSLTKN---VAMK--IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
DH IL LA + S S+L VA + D PNT V RN +F+ +LA +L
Sbjct: 54 VDHRILDLAAIFADSRSALNAANDLVASQGDYADQEAPNTEVEFRNGVFIAILTSLAMQL 113
Query: 127 GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G + G D SG YPDC D + A++ A+ LG V + TP + K + KL
Sbjct: 114 GADALYFGA-HLDDSGVIYPDCSPDFVAAMDQAVRLGTGGKVRLETPFGQMTKADIVKLG 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G + +++CY G + C C C R+K +
Sbjct: 173 LELG------VPYHLTYSCYAGSQPP-------CGQCGTCIDRRKAF 206
>gi|325919879|ref|ZP_08181869.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
gi|325549663|gb|EGD20527.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
Length = 196
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 101 NNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
+ +P T+VP RN I L A A +G ++ GV DYSGYPDCR + +RA E NL
Sbjct: 57 DGIPVTYVPARNTIMLSLALGWAEVIGANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANL 116
Query: 161 GMESHVT-----VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWG 215
++ V VH PL +L K + + +G V+ L S CY D R
Sbjct: 117 ATKAGVEGAGLRVHAPLQFLSKADIVREGVRLG----VDFGLTVS--CYRADADGR---- 166
Query: 216 YGCNSCPACYLRQKGWME 233
C C AC LR G+ +
Sbjct: 167 -ACGHCDACRLRAAGFTD 183
>gi|77360059|ref|YP_339634.1| regulator protein [Pseudoalteromonas haloplanktis TAC125]
gi|110816244|sp|Q3IKE8|QUEC_PSEHT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|76874970|emb|CAI86191.1| putative regulator protein [Pseudoalteromonas haloplanktis TAC125]
Length = 218
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 37/229 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVELMP 65
++++SGG DS T L+ AL + V LSFDYGQR+ EL+ +L V KIV++
Sbjct: 6 VVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAAQVCKQLNVPHKIVDIS- 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
AI I SSLT ++ + +++++ +T VP RN+I L A
Sbjct: 65 --------------AINQIIGGSSLTDDIDVPEGHYEEDSMKSTIVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + + G D++ YPDCR + ++ ++ + V + +P + K +
Sbjct: 111 AVSLKASQVYYGAHSGDHAIYPDCRPEFVQKMDDVCRIANYDAVEIFSPYLNNTKIDILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L ++ TCY G+ C C AC R + +
Sbjct: 171 DGIAMG------LDYSQTWTCYNGREK-------ACGKCGACQERLEAF 206
>gi|146295173|ref|YP_001178944.1| exsB protein [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|167016419|sp|A4XFR8|QUEC_CALS8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|145408749|gb|ABP65753.1| preQ(0) biosynthesis protein QueC [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 225
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++ SGG DS+T L ++ T+SF YGQ++ ELE KK EL+
Sbjct: 3 AVVVLSGGMDSTTLLYDVKNQGYETYTISFLYGQKHSKELE----FAKKTCELLKV---- 54
Query: 71 LGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ ++ D++ S+LTK+ D ++ T VP RN++FL A + A L
Sbjct: 55 --PHKIVDISFFADLAPSALTKSSWSVPEGYYTDESMKQTVVPNRNMVFLSLATSYAISL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ G D+ YPDCR + + A++ +I L V + P + LKK + K+
Sbjct: 113 KAQKLFYGAHAGDHPIYPDCRKEFVEAMKRSILLCDYQIVELEAPYVDLKKEDILKIGLK 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L + +CY G C C C R + +
Sbjct: 173 LG----VDYSL--TWSCYKGGEK-------ACGRCGTCTERIEAF 204
>gi|51244019|ref|YP_063903.1| hypothetical protein DP0167 [Desulfotalea psychrophila LSv54]
gi|81643310|sp|Q6ARX9|QUEC_DESPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|50875056|emb|CAG34896.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 219
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 34/227 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMPKW 67
++++ SGG DS+ L+ L + +SFDYG ++ ++ + LC I
Sbjct: 4 SIIVLSGGMDSAVLLAQTLKEGKTAQAISFDYGSKHNDRELPMAVGLCEEFAI------- 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-----NLPNTFVPGRNIIFLVFAATL 122
+ I+ L +G++ SSL +I D N+ +T VP RN I L AA
Sbjct: 57 -----KHQIIKLPFIGELFSSSLLTG-GEEIPDGAYGQENMKSTVVPFRNGIMLAIAAGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + +++G D+ YPDCR + A A+NLG + V + P + K +
Sbjct: 111 AESVQAGEVLLGSHSGDHHIYPDCRPEFNNAFAEAVNLGTDGQVAIRFPFSEMTKRDIGD 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
L + + +L ++ TCY G C C AC R++
Sbjct: 171 LGRTL------DLDFAKTWTCYKGGE-------LHCGVCAACDERKE 204
>gi|149197765|ref|ZP_01874814.1| exsB protein [Lentisphaera araneosa HTCC2155]
gi|149138986|gb|EDM27390.1| exsB protein [Lentisphaera araneosa HTCC2155]
Length = 226
Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 105/237 (44%), Gaps = 35/237 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A +L SGG DS+T L + +D V LSFDYGQ++ EL V K + +P+ K
Sbjct: 4 AAVLISGGLDSTTLLHHVIKSLGYDEVYALSFDYGQKHSREL----IVAKAQCDSLPEVK 59
Query: 69 DSLGEDHILPLAILGDI--SHSSLTKNVA-------MKIQDNNLPNTFVPGRNIIFLVFA 119
E ++L ++ +GD S S+L K + D + P T+VP RN++ L A
Sbjct: 60 ----EHNVLDISYMGDFLGSSSALVKGGVEVPDLKDIAEGDLDQPVTYVPNRNMMLLSIA 115
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A+ A + G D GY DC + + +L + V V P + + K
Sbjct: 116 ASFAESRDCRQLYYGAQAQDEYGYWDCTESFLARMNDVFSLNRRTGVHVEAPFVNMSKGH 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K+ +G + ++ TCY G DK C CP+C R + FKE
Sbjct: 176 VAKIGLALG------IDYAQTWTCYRGG-DKP------CEVCPSCVERA---LAFKE 216
>gi|332534089|ref|ZP_08409938.1| queuosine biosynthesis QueC ATPase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036526|gb|EGI72994.1| queuosine biosynthesis QueC ATPase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 218
Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVELMP 65
++++SGG DS T L+ AL + V LSFDYGQR+ EL+ +L V KIV++
Sbjct: 6 VVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAASVCEKLNVPHKIVDIS- 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
AI I SSLT ++ + ++ ++ +T VP RN+I L A
Sbjct: 65 --------------AINQLIGGSSLTDDIDVPEGHYEEESMKSTIVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + + G D++ YPDCR + ++ ++ + V + +P + K
Sbjct: 111 AVSLKASQVYYGAHSGDHAIYPDCRPEFVQKMDDVCRIANYDAVEIFSPYLNNTKIGILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G L ++ TCY G+ C C AC R + +
Sbjct: 171 DGIEMG------LDYSQTWTCYNGREK-------ACGKCGACQERLEAF 206
>gi|189346042|ref|YP_001942571.1| exsB protein [Chlorobium limicola DSM 245]
gi|254764319|sp|B3EGF5|QUEC_CHLL2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189340189|gb|ACD89592.1| exsB protein [Chlorobium limicola DSM 245]
Length = 226
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 103/231 (44%), Gaps = 35/231 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPKW 67
A+LL SGG DS + A + + + +YGQR + ELEC R+C +I +
Sbjct: 3 AVLLISGGMDSLVTTAIAAEEKLELAAMHVNYGQRTWQKELECFRRICNHYQIRHRLE-- 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATL 122
+ L SSLT + AM + Q ++P ++VP RN FL A +
Sbjct: 61 ---------IEAGYLAQTGGSSLT-DPAMPVSGADLQGTDIPTSYVPFRNAGFLSMAVSW 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
+ +G I IG E D SGYPDCR A I LG ++ + + TPL+ ++K +
Sbjct: 111 SEVIGAGKIFIGAVEEDSSGYPDCRQVFYDAFNRVIELGTRPDTAIEIVTPLISMQKCDI 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ G +L N S +CY + G C C +C R + +
Sbjct: 171 V-----LKGMEL-NAPFACSWSCYKSE-------GRACGVCDSCARRLRAF 208
>gi|254173289|ref|ZP_04879962.1| exsB protein [Thermococcus sp. AM4]
gi|214032698|gb|EEB73527.1| exsB protein [Thermococcus sp. AM4]
Length = 239
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 26/235 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKV------ELECRL-CVRK 58
A++LFSGG DS+ CL WA +D V L +YG N+V EL L VR
Sbjct: 4 AVVLFSGGLDSTACLYWAKKNYDEVIMLVINYGSNEERVTNRVAEFFSKELNVPLKIVRL 63
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+E K + + P ++ K A + +VP RN++ +
Sbjct: 64 DFLEEFSKLRGTTLVGGETPKVTAQELEDFERAKETAKSV--------WVPARNVVLIAV 115
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA+L LG +I++G + + +PD + + + + G + V V PL+ L K
Sbjct: 116 AASLLDALGGGDIIVGFNAEEGATFPDNTPEFVEKMNEMLKYGTMAEVKVVAPLIDLDKR 175
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +++ N E S++CY+ K C C +C R +G +E
Sbjct: 176 GIARLLKEL------NAKYEYSNSCYMPKGFTEDGKPIHCGQCESCVRRHRGLIE 224
>gi|87122357|ref|ZP_01078238.1| putative regulator protein [Marinomonas sp. MED121]
gi|86162332|gb|EAQ63616.1| putative regulator protein [Marinomonas sp. MED121]
Length = 221
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 41/238 (17%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLC----VRKKIV 61
A A++++SGG DS T L AL D + +SF+YGQ++ EL ++C + K+V
Sbjct: 2 ANKAVVVYSGGMDSYTVLHKALSENDEIYAISFNYGQKHNKELIIAAQVCQELNIPHKVV 61
Query: 62 E------LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
+ LM +L D +P GD +D N+ +T VP RN++
Sbjct: 62 DITAINSLMAGSSLTLDSDEAIPE---GDY-------------EDANMKSTVVPNRNMVL 105
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ A A L + + G D+ YPDCR + + A+ + V + P +L
Sbjct: 106 ISMAIAYAVSLEASKVYYGAHSGDHDIYPDCRPEFVEAMNAVSLIANYQAVEIIAP--FL 163
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + LA + +NL ++ TCY G+ C C +C R + +
Sbjct: 164 KSSKAEILASGLA----MNLDYSKTWTCYNGREK-------ACGKCGSCLERLASFKQ 210
>gi|34419359|ref|NP_899372.1| exsB protein [Vibrio phage KVP40]
gi|34333040|gb|AAQ64195.1| exsB protein [Vibrio phage KVP40]
Length = 238
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 14 LFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+ SGG DS+ +D F D V LSF YGQ+ +ELE +L +K +E
Sbjct: 6 VLSGGLDSTILTYKLVDEFGKDNVFALSFYYGQKQSIELEKAKLTCQKLGIEHRLIDISF 65
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LGE + + +I+ S + + + P T VP RN++ A + A G +
Sbjct: 66 LGE---VVAPVCANIAGSDVAMPTIQDVLGDPQPPTEVPYRNMLLNTIAFSFAQANGCSA 122
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+ G+ D GY DC D + + L + +T+H P + K + + ++G
Sbjct: 123 VFTGIQVHDAYGYWDCTQDFLDGMNKISALNRQHEITLHAPFAQMSKADEIAIGVELG-- 180
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ E+S TCY E G C CP+C R
Sbjct: 181 ----VPFEDSLTCY-----DPNEAGESCGKCPSCAER 208
>gi|120553049|ref|YP_957400.1| exsB protein [Marinobacter aquaeolei VT8]
gi|189038922|sp|A1TWU4|QUEC_MARAV RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|120322898|gb|ABM17213.1| preQ(0) biosynthesis protein QueC [Marinobacter aquaeolei VT8]
Length = 221
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
S ++++SGG DS T L A R +V LSF+YGQR+ EL+ V + E +P
Sbjct: 4 SVVVIYSGGMDSFTLLHLARARGLKVHALSFNYGQRHVRELDVAADVCR--AEGIPH--- 58
Query: 70 SLGEDHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ + + ++ S SSLT ++ + +++ + T VP RN+I L A A
Sbjct: 59 -----KVIDIRAMSEVMSGSSLTSDIEVPEGHYEEDTMKATVVPNRNMILLSLATGYAVT 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G + G D++ YPDCR + + ++ + V + P M + K +
Sbjct: 114 TGAGAVWYGAHGGDHAIYPDCRPEFVEKMDAVCRVANYEPVGIEAPFMAMDKGQILAEGL 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L ++ TCY G RDK C C +C R + +
Sbjct: 174 KLG------LDYSQTWTCYNG-RDK------ACGRCGSCVERLEAF 206
>gi|78189278|ref|YP_379616.1| ExsB [Chlorobium chlorochromatii CaD3]
gi|78171477|gb|ABB28573.1| ExsB [Chlorobium chlorochromatii CaD3]
Length = 218
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 81 ILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAATLAYRLGITNIVIGV 135
LG I SSLT +++M + NL P ++VP RN FL A + A +G I IG
Sbjct: 55 FLGKIGGSSLT-DLSMPVSVANLESHAIPASYVPFRNAGFLSMAVSWAEVIGAERIFIGA 113
Query: 136 CETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
E D SGYPDCR A I LG E+H+ V TPL+ LKK+E + ++
Sbjct: 114 VEEDSSGYPDCRKIFYEAFNRVIELGTKPETHIEVVTPLIALKKWEIVRKGIEL------ 167
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ S +CY + G C C +C LR + +
Sbjct: 168 HAPFAFSWSCYKNE-------GQACGVCDSCALRLRAF 198
>gi|289582000|ref|YP_003480466.1| exsB protein [Natrialba magadii ATCC 43099]
gi|289531553|gb|ADD05904.1| exsB protein [Natrialba magadii ATCC 43099]
Length = 251
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 35/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T + A + + L YGQR + ELEC + D
Sbjct: 25 AVVLLSGGMDSATAAAEARSQGYDIYALHTSYGQRTETRELECAR-----------QLAD 73
Query: 70 SLGEDHILPLAI--LGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATL 122
+ L + L I SSLT + M + D + +P+++VP RN L A +
Sbjct: 74 EFEANDFLQIETGHLSAIGASSLTDD-EMAVADADMDSDEIPSSYVPFRNANLLAMAVSY 132
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
A + IG D+SGYPDCR + A E ++G E+ +++ P + K +
Sbjct: 133 AEANDCEAVFIGAHSEDFSGYPDCRPEFFEAFERVADVGTKPETEISIEAPFVEWSKTDI 192
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++G + E + +CY RD + C +C AC R + +
Sbjct: 193 AAHGTELG------VPYEHTWSCY---RDDQ----PACGTCDACAYRLQAFQ 231
>gi|291522440|emb|CBK80733.1| preQ(0) biosynthesis protein QueC [Coprococcus catus GD/7]
Length = 225
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI-VELMPKW 67
AL+L SGG DS+TCL A+D++ D V L+ YGQR+ E+E V VE++
Sbjct: 3 ALVLSSGGVDSTTCLGLAVDKYGSDNVIALAITYGQRHTKEIEAAKAVAAYYHVEML--- 59
Query: 68 KDSLGEDHILPLAILGDISHSSLT---KNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATL 122
L I + +SHS ++ A ++Q D +T+VP RN +FL AA++
Sbjct: 60 --HLDLTPIFQYSDCSLLSHSDQAIPEESYAEQLQHSDGKPVSTYVPFRNGLFLSSAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A G I G D +G YPDC A+ AI G + V P + L K +
Sbjct: 118 ALSKGCDVIYYGAHSDDAAGNAYPDCSEVFKNAMNQAIYEGSGHQLKVEAPFVNLTKADV 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++ N+ E + +CY G C C C R K +
Sbjct: 178 VKKGLEL------NVPYELTWSCYEGGEKP-------CGKCGTCIDRAKAF 215
>gi|291279332|ref|YP_003496167.1| ExsB family transcriptional regulator [Deferribacter desulfuricans
SSM1]
gi|290754034|dbj|BAI80411.1| transcriptional regulator, ExsB family [Deferribacter desulfuricans
SSM1]
Length = 237
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 106/234 (45%), Gaps = 31/234 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS + A D + L +YGQR E R + KD+
Sbjct: 4 AIVLVSGGMDSCVTAAIAKDMGYELYLLHTNYGQRT----ENRELKAFYDIASYYDAKDT 59
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAATLAYR 125
L ++ + L I S+LT + ++++ NL P T+VP RN L A + A
Sbjct: 60 L----VVSIDYLKKIGGSALT-DEKIEVEKGNLNRKEIPKTYVPFRNANILSIATSWAEV 114
Query: 126 LGITNIVIGVCETDYSGYPDCR---HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+ I IG E D SGYPDCR +D + ++ L + + V TPL+ +KK + K
Sbjct: 115 IEAERIFIGAVEEDSSGYPDCRKIFYDKFNDL-LSVALAKDIGLKVETPLINMKKKDIVK 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++ N L S +CY DK C C +C LR KG+ME E
Sbjct: 174 KGVEL------NAPLHLSWSCY-KSEDK------ACGECDSCLLRLKGFMEAGE 214
>gi|312136612|ref|YP_004003949.1| exsb protein [Methanothermus fervidus DSM 2088]
gi|311224331|gb|ADP77187.1| exsB protein [Methanothermus fervidus DSM 2088]
Length = 231
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
KAP A+ + SGG DS L + + V ++FDYGQ++ E + KKI +
Sbjct: 3 KAPRAISILSGGLDSVVALFDFIKKNPNGEVHAITFDYGQKS---AEMEINASKKICKY- 58
Query: 65 PKWKDSLGEDH-ILPLAILGDISHSSLTKN---VAMKIQD--------NNLPNTFVPGRN 112
LG H +L + LG + S+LT + +KI D +VP RN
Sbjct: 59 ------LGIKHSVLNVKWLGKLGTSALTTDKEIPKLKISDLEDKEKCEKTAKMVWVPARN 112
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
I+F A+ A I++G + S +PD + + A + +G S++ + PL
Sbjct: 113 IVFTAIASAFAEAENAEKIIVGWDREEASTFPDNSKEFLSAFNNLLAIGTMSNINIEAPL 172
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + K+E KL + G + E +++CY G + C C +C R++ +
Sbjct: 173 IDMDKHEIVKLGKKYG------VPFEFTYSCYQG-------FEKHCGVCESCVRRKRAF 218
>gi|145219402|ref|YP_001130111.1| exsB protein [Prosthecochloris vibrioformis DSM 265]
gi|189038933|sp|A4SDQ0|QUEC_PROVI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|145205566|gb|ABP36609.1| exsB protein [Chlorobium phaeovibrioides DSM 265]
Length = 227
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 33/230 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPKW 67
A++L SGG DS + A + ++ + +YGQR + ELE + I EL+
Sbjct: 3 AVVLLSGGMDSLVTTAIAHNEGLQLAAMHVNYGQRTWQRELESFRSIAGHYGIGELLEVN 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
D LG I SSLT + +Q +P ++VP RN FL A + A
Sbjct: 63 AD-----------FLGTIGGSSLTDHTMAVSGADLQGTAIPTSYVPFRNACFLSMAVSWA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
+G + IG E D SGYPDCR A I LG E+ + + TPL+ ++K
Sbjct: 112 EVIGAQKLYIGAVEEDSSGYPDCRKVFYDAFNKVIELGTKPETGIEILTPLIAMQKAGIV 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++ + S +CY + G C C +C R + +
Sbjct: 172 EKGMEL------DAPFHYSWSCYKSE-------GKACGVCDSCARRLRAF 208
>gi|193213013|ref|YP_001998966.1| exsB protein [Chlorobaculum parvum NCIB 8327]
gi|254764320|sp|B3QPB3|QUEC_CHLP8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|193086490|gb|ACF11766.1| exsB protein [Chlorobaculum parvum NCIB 8327]
Length = 227
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 33/230 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPKW 67
A+LL SGG DS + A + + +YGQR + ELEC ++C I + +
Sbjct: 3 AVLLVSGGMDSLVATALAHHHGFELAAMHVNYGQRTWQKELECFRQICDHYGIEKRLE-- 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ LG I SSLT + ++P ++VP RN FL A + +
Sbjct: 61 ---------IDAGFLGAIGGSSLTDAAIPVGPADLAGTDIPTSYVPFRNANFLSMAVSWS 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
+G I IG E D SGYPDCR A I G E+ + + TPL+ + K E
Sbjct: 112 EVIGANRIYIGAVEEDSSGYPDCRKVFYDAFNQVIEHGTRPETSIEIVTPLIDMSKAEIV 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++ + S +CY + G C C +C R + +
Sbjct: 172 KRGMEL------DAPFHFSWSCYKSE-------GKACGVCDSCARRLRAF 208
>gi|14520309|ref|NP_125784.1| hypothetical protein PAB2286 [Pyrococcus abyssi GE5]
gi|74548110|sp|Q9V2I3|QUEC_PYRAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|5457524|emb|CAB49015.1| Hypothetical protein [Pyrococcus abyssi GE5]
Length = 239
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 40/242 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++LFSGG DS+ L WAL +D V L+ +YG + + V K+ E + +
Sbjct: 4 AVVLFSGGLDSTASLYWALKHYDEVIMLTINYGSQEE-------RVTNKVAEFFSRELN- 55
Query: 71 LGEDHILPLAILG-DISHSSLTKNVAMKIQDNNLP------------------NTFVPGR 111
+PL I+ D H +K K+ + N+P + ++P R
Sbjct: 56 ------VPLKIVKIDFLH-EFSKIAGSKLVEGNVPEVTARELEDFEKAKETARSVWIPAR 108
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
N + + AA+L LG +I++G + + +PD + + I +A+ + V V P
Sbjct: 109 NFVLIGVAASLLDALGGGDIIVGFNKEEGETFPDNTKEFVDRINSALKYATMNEVRVVAP 168
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ L K +L +++ N E S++CY + C C +C R +G
Sbjct: 169 LIELDKKGIARLLKEL------NAKYEYSNSCYNPQGFTEDGKPIHCGRCESCVRRHRGL 222
Query: 232 ME 233
+E
Sbjct: 223 IE 224
>gi|284929681|ref|YP_003422203.1| preQ(0) biosynthesis protein QueC [cyanobacterium UCYN-A]
gi|284810125|gb|ADB95822.1| preQ(0) biosynthesis protein QueC [cyanobacterium UCYN-A]
Length = 181
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 22/168 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK-------IVEL 63
A++L SGG DS+T + A + ++ LS YGQ + ELE + K+ I+++
Sbjct: 7 AVVLLSGGLDSATSAAIAAAQGYKLVALSLRYGQLHHKELESAKTIAKELDINSHYIIDV 66
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +W S D L + + G + +N+P+T+VPGRN +F+ A +L
Sbjct: 67 DIAQWGGSSLTDESLSIPLDG--------------VSPHNIPSTYVPGRNTVFIALALSL 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
A G I +G+ DYSGYPDCR + ++A + N+ ++ + +T
Sbjct: 113 AEAKGAKAIFLGINMIDYSGYPDCRSEYLKAYQDLANISSKAGIEGNT 160
>gi|193215202|ref|YP_001996401.1| exsB protein [Chloroherpeton thalassium ATCC 35110]
gi|254764322|sp|B3QS09|QUEC_CHLT3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|193088679|gb|ACF13954.1| exsB protein [Chloroherpeton thalassium ATCC 35110]
Length = 226
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 23/225 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP-KWKD 69
A++L SGG DS + A + L +YGQR + + L +KI + + +
Sbjct: 3 AVVLLSGGMDSLVTTAIAAHLGYELAALHINYGQRTE---KRELVAFQKICDFYRIERRL 59
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ +H L+++G S + L V K+ +P ++V RN L A + A +G
Sbjct: 60 EINFEH---LSLIGGSSLTDLAMPVTTAKLHSKEIPTSYVAFRNANMLSVAVSWAEVIGA 116
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQD 186
I IG + D SGYPDCR + +A I G ++ + + TP++ LKK+E
Sbjct: 117 NKIFIGAVDEDSSGYPDCRVNFFQAFNELIKHGTKPDTRIEIQTPVISLKKWEIV----- 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
I G +L + E S +CY + C C +C LR + +
Sbjct: 172 IKGMEL-EVPFEHSWSCYKSEH-------VACGVCDSCALRLRAF 208
>gi|109521761|ref|YP_655683.1| gp3 [Mycobacterium phage Qyrzula]
gi|91980705|gb|ABE67423.1| gp3 [Mycobacterium phage Qyrzula]
Length = 235
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 105/232 (45%), Gaps = 32/232 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
S L+L SGG DSST L+WALDR DR L DYGQR+ VE V + W
Sbjct: 6 SPLVLLSGGMDSSTLLAWALDRPDVDRASALFVDYGQRHVVERTSSQLVAQ---HYGAAW 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATL 122
+ L L G +S+LT +A ++ ++N+ T VP RN + AA +
Sbjct: 63 SE-------LDLRAFGASVNSALTV-MAREVPHGHYAEDNMVQTVVPNRNATLISAAAGI 114
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A LG ++ V D++ YPDCR + + AI+ A G HV P K + +
Sbjct: 115 AASLGHDAVLTAVHVGDHAVYPDCRPEFVAAIDMATFAGCGVHVV--APFQTGDKADIAR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGK-RDKRYEWGYGCNSCPACYLRQKGWME 233
L GGQ V L S CY G D R+ C C C R + + E
Sbjct: 173 L----GGQLGVPYHLTWS--CYEGGLNDARH-----CGRCGTCVERAEAFAE 213
>gi|327198316|ref|YP_004306890.1| QueC [Streptococcus phage Dp-1]
gi|314912618|gb|ADT64009.1| QueC [Streptococcus phage Dp-1]
Length = 228
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 29/233 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECR------LCVRKKIVE 62
+++L SGG DS+TCL+ +D++ V ++F+YGQ+++ ELE V+ I+E
Sbjct: 3 SVVLLSGGVDSATCLAIEVDKWGSKNVHAIAFNYGQKHEAELENAANVAMFYGVKFTILE 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ K S L G+ISH K+ A + + + +T+VP RN + L AA
Sbjct: 63 IDSKIYSSS---SSSLLQGKGEISHG---KSYAEILAEKEVVDTYVPFRNGLMLSQAAAY 116
Query: 123 AYRLGITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
AY +G + +V + YPDC + ++ A+ G VT+ PL+ L K +
Sbjct: 117 AYSVGASYVVYGAHADDAAGGAYPDCTPEFYNSMSNAMEYGTGGKVTLVAPLLTLTKAQV 176
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K D+ D+ + + +CY + C +C C R+K + E
Sbjct: 177 VKWGIDL---DVPYFL---TRSCYESDAES-------CGTCATCIDRKKAFEE 216
>gi|332305742|ref|YP_004433593.1| exsB protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173071|gb|AEE22325.1| exsB protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 218
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE--CRLCVRKKIVELMPKWKD 69
+++FSGG DS T L+ A+ V LSF+YGQR+ EL+ R C KI+ + K
Sbjct: 6 VVIFSGGMDSFTVLNMAVKDGYEVHALSFNYGQRHSKELDYASRAC---KILGVAHK--- 59
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ ++ + + I SSLT +V + + ++ +T VP RN+I L A A
Sbjct: 60 ------IIDISAINELIGGSSLTSDVDIPEGHYAEESMKSTVVPNRNMILLSMAVGYAVS 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
L + G D+ YPDCR + + + + + + +P ++ K +
Sbjct: 114 LDANKVYYGAHSGDHDIYPDCRPEFVERMNDVCAIANYEKIEIVSPFLYQSKIDILTAGL 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G L + TCY G+ C C AC R + +
Sbjct: 174 NMG------LDYGLTWTCYNGREK-------ACGKCGACQERLEAF 206
>gi|300712359|ref|YP_003738173.1| exsB protein [Halalkalicoccus jeotgali B3]
gi|299126042|gb|ADJ16381.1| exsB protein [Halalkalicoccus jeotgali B3]
Length = 222
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECR--LCVRKKIVELMPKW 67
A++L SGG DS+T A + + L YGQR + E +C L + +
Sbjct: 4 AVILLSGGMDSATAAYEARETGYEIAALHTSYGQRTEGKEYDCAHWLAEELDAADFL--- 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ DH LA +G S + + V + +P+T+VP RN L A + A G
Sbjct: 61 --HIETDH---LAAIGGSSLTDESMAVGDASEGEEIPDTYVPFRNANLLSMAVSYAEARG 115
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQ 185
I IG D++GYPDCR A + ++ G E+ + + P + K E +
Sbjct: 116 AEAIYIGAHSEDFAGYPDCRPAFFEAFQGVVDTGTKPETEIGIEAPYVEYSKTEIAERGL 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G + E + +CY + C +C +C R++ +
Sbjct: 176 ELG------VPYEHTWSCYRNEAPA-------CGTCDSCTYRREAF 208
>gi|260437275|ref|ZP_05791091.1| ExsB protein [Butyrivibrio crossotus DSM 2876]
gi|292810585|gb|EFF69790.1| ExsB protein [Butyrivibrio crossotus DSM 2876]
Length = 227
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 104/231 (45%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRK------KIVE 62
AL+L SGG DS+TCL A+D++ + V +LS YGQ++ ELE V K ++
Sbjct: 3 ALVLSSGGVDSTTCLGMAVDKYGKENVVSLSVFYGQKHTKELEAATKVAKYYGVEHMAID 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L +KDS D L I H S + ++ D +T+VP RN +FL AA++
Sbjct: 63 LSLIFKDS---DCSLLSHSTEKIPHESYAEQ--LEKTDGKPVSTYVPFRNGLFLATAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A I G D +G YPDC A+ TA+ G + + PL+ T
Sbjct: 118 ALSKKCDVIYYGAHADDAAGNAYPDCSEVFYNAMNTAVYEGSGRQLKIEAPLV------T 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
W A + + + E + +CY G DK C C C R K +
Sbjct: 172 WNKATVVKKGLELKVPYELTWSCYEGG-DKP------CMKCGTCIDRMKAF 215
>gi|261417332|ref|YP_003251015.1| exsB protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373788|gb|ACX76533.1| exsB protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302326040|gb|ADL25241.1| protein ExsB [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 217
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 32/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
ALL+ SGG DS T L DR D +SFDYG + K + +
Sbjct: 4 ALLVLSGGMDSVTLL---YDRAADIALAVSFDYGSNHN----------DKEIPFARMHCE 50
Query: 70 SLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG HI +PL + D SSL D N+ +T VP RN I L AA LA
Sbjct: 51 KLGIPHITIPLKFMHDYFTSSLLSGADAIPEGTYADENMKSTVVPFRNGIMLSVAAGLAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ +++ D++ YPDCR + ++ + AI+ G +++T+ P + K + +
Sbjct: 111 SRDLKRVMMANHFGDHAIYPDCREEFVKNMSAAISAGTYANITIDAPYTNISKADIARKG 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G L E+ +CY G + C C C R+ E
Sbjct: 171 KALG------LDYSETWSCYKGGK-------IHCGKCATCLERKAALAE 206
>gi|225572382|ref|ZP_03781246.1| hypothetical protein RUMHYD_00676 [Blautia hydrogenotrophica DSM
10507]
gi|225040149|gb|EEG50395.1| hypothetical protein RUMHYD_00676 [Blautia hydrogenotrophica DSM
10507]
Length = 231
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+TCL A++++ V LS YGQ+++ E+E ++I+E
Sbjct: 5 AMVLFSGGVDSTTCLGLAIEKYGVQNVIPLSVQYGQKHEKEVE----AARRILEYYGIEG 60
Query: 69 DSLGEDHILPLAILGDISHSS---LTKNVAMKIQDN-NLP-NTFVPGRNIIFLVFAATLA 123
L I + +SHS + A ++++N +P +T+VP RN +FL AA++A
Sbjct: 61 MELDLTPIFAYSDCSLLSHSEKEIPEASYAEQLRENEGVPVSTYVPFRNGLFLACAASIA 120
Query: 124 YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ I G D +G YPDC ++ A+ G + + P + + K
Sbjct: 121 LSRECSCIYYGAHRDDAAGSAYPDCSESFFESMNRAVYEGSGQQIRIEAPFIKMNK---- 176
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
AQ + + + E + +CY GK C C C R + +
Sbjct: 177 --AQIVAEGLRLKVPYEFTWSCYEGKEKP-------CGVCGTCIDRSEAF 217
>gi|221135471|ref|ZP_03561774.1| regulator protein [Glaciecola sp. HTCC2999]
Length = 210
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 40/226 (17%)
Query: 20 DSSTCLSWALDR---FDRVETLSFDYGQRN--KVELECRLC----VRKKIVELMPKWKDS 70
DS T L LD+ + + L+F+YGQ++ +VE R+C ++ K+V++
Sbjct: 2 DSFTLLHHILDQGLAVNEIAALTFNYGQKHVKEVEFARRVCEALGIQHKVVDIS------ 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
AI + SSLT ++ + + +N+ +T VP RN+I L A A L
Sbjct: 56 ---------AINSLMGGSSLTDDIEIPEGHYEADNMQSTVVPNRNMILLSMAVAYAVSLE 106
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ G D++ YPDCR + ++ ++ + V++ TP + + K E ++
Sbjct: 107 ADKVYYGAHSGDHAIYPDCRPEFVQKMDEVCRIANYQSVSIDTPFIHMSKIEILTRGVNL 166
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
G L ++ TCY G+ + C C AC R + + E
Sbjct: 167 G------LDYSQTWTCYNGRE-------HACGKCGACVERLEAFTE 199
>gi|313126239|ref|YP_004036509.1| preq(0) biosynthesis protein quec [Halogeometricum borinquense DSM
11551]
gi|312292604|gb|ADQ67064.1| preQ(0) biosynthesis protein QueC [Halogeometricum borinquense DSM
11551]
Length = 236
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A++L SGG DS+T A R + L YGQ K E + C + EL +
Sbjct: 9 TAVVLLSGGMDSATTAYEAKARGYDLYCLHTSYGQ--KTETKEYDCATQLAEELDAEEFL 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAATLAY 124
+ DH L DI SSLT + + ++D ++ P ++VP RN L A + A
Sbjct: 67 HIETDH------LSDIGASSLTDD-EIDVEDADMDAEEIPTSYVPFRNANLLSMAVSFAE 119
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
+ +G DY+GYPDCR + A E ++ G E+++ + P + K + +
Sbjct: 120 ANDCDAVFVGAHSEDYAGYPDCRPEFFEAFEAMVDTGTKPETNIDIEVPFVTDSKTDIAQ 179
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+++ ++ E + +CY + C +C +C R + +
Sbjct: 180 RGREL------DVPFEHTWSCYRAEEP-------ACGTCDSCAYRLQAF 215
>gi|257386659|ref|YP_003176432.1| exsB protein [Halomicrobium mukohataei DSM 12286]
gi|257168966|gb|ACV46725.1| exsB protein [Halomicrobium mukohataei DSM 12286]
Length = 271
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 30/238 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A SA++L SGG DS+T A+DR ++ + L YGQ + E E R C + +
Sbjct: 43 ADSAVILASGGMDSATAAYEAVDRGYEALYLLHTSYGQATE-ETE-RACAQA-----LAD 95
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAAT 121
D+ H+ L I SSLT M + D +L P ++VP RN L A +
Sbjct: 96 HVDAADFLHV-ETGHLAQIGASSLTDE-EMAVDDADLDSDEIPTSYVPFRNANLLSMAVS 153
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYE 179
A + I IG D+SGYPDCR A + I+ G E+ + + P + K +
Sbjct: 154 YAEANDCSAIFIGAHSEDFSGYPDCRPQFFDAFQQVIDAGTKPETEIELVAPFVEWSKTD 213
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++G + E++ +CY E C +C AC R + + E+
Sbjct: 214 IAERGLELG------VPYEDTWSCYR-------ESPPACGTCDACAFRLQAFQNLGER 258
>gi|167757165|ref|ZP_02429292.1| hypothetical protein CLORAM_02715 [Clostridium ramosum DSM 1402]
gi|237735747|ref|ZP_04566228.1| succinoglycan biosynthesis regulator [Mollicutes bacterium D7]
gi|167703340|gb|EDS17919.1| hypothetical protein CLORAM_02715 [Clostridium ramosum DSM 1402]
gi|229381492|gb|EEO31583.1| succinoglycan biosynthesis regulator [Coprobacillus sp. D7]
Length = 227
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 26/231 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+LFSGG DS+T L+ A+ D V LS YGQ++ E+E V KI +
Sbjct: 4 LVLFSGGVDSTTALALAIQEHGKDNVVALSISYGQKHTKEIE----VANKIAQFYQVEHL 59
Query: 70 SLGEDHILPLAILGDISHSS-----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
L I + + HS + N + D N +T+VP RN +FL AA++A
Sbjct: 60 YLDLAKIFTYSNCSLLQHSDNEIPHESYNEQLNKTDGNPVSTYVPFRNGLFLSSAASIAL 119
Query: 125 RLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
G I G D +G YPDC A+ AI G + + P + + K + K
Sbjct: 120 SKGCNIIYYGAHSDDAAGSAYPDCSKVFNNAMNQAIYEGSGHQLEIKAPFVEMTKADIVK 179
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G + + + +CY G C +C C RQ +++
Sbjct: 180 IGLSLG------VPYQLTWSCYEGNDTP-------CGTCGTCIDRQNAFLK 217
>gi|21226855|ref|NP_632777.1| hypothetical protein MM_0753 [Methanosarcina mazei Go1]
gi|74525901|sp|Q8PYU8|QUEC_METMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|20905158|gb|AAM30449.1| conserved protein [Methanosarcina mazei Go1]
Length = 231
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 39/237 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ L S G DS L+ A + + ++FDYGQR ++ +E K +
Sbjct: 3 AITLLSSGLDSVAALAIAAESLEIEMAITFDYGQR----------AGQREMEYSEKVCEH 52
Query: 71 LG-EDHILPLAILGDISHSSLTK------NVAMKIQDNNLPN---------TFVPGRNII 114
G E I+ L LG+I+H+SL +++ + D N P+ +VP RN +
Sbjct: 53 FGIEQRIIKLDWLGEITHTSLVNRDEEVPSLSFEDIDENSPSMITEYSAKAVWVPNRNGV 112
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
L A + A G IV+G + +PD D I+A++ A + ++ V V PL
Sbjct: 113 MLNIAGSFAESRGCDYIVVGFNGEEAGTFPDNSRDYIQAVDNAFSYSTQNGVKVLAPLAE 172
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ K E K A + LE S +CY G C C +C R + +
Sbjct: 173 MGKTEIVKKALE------AEAPLEYSWSCYHGGE-------IPCGKCESCVRRARAF 216
>gi|91773251|ref|YP_565943.1| ATPase ExsB [Methanococcoides burtonii DSM 6242]
gi|118574289|sp|Q12WI3|QUEC_METBU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|91712266|gb|ABE52193.1| Archaeosine biosynthesis protein [Methanococcoides burtonii DSM
6242]
Length = 233
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 38/237 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
++LL S G DS L+ ALD D L+FDYGQR+ KK +E +
Sbjct: 3 SILLLSSGLDSVAALAIALDNSDVFMALTFDYGQRSV----------KKEIEYSRMVCEH 52
Query: 71 LGEDH-ILPLAILGDISHSSLT-KNVAM-------------KIQDNNLPNTFVPGRNIIF 115
G +H I+ L+ L I+++SL K++ + I +++ + +VP RN +F
Sbjct: 53 YGIEHRIITLSWLSSITNTSLVNKDLDVPELSINDLIDGPDNITEDSAKSVWVPNRNGVF 112
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+ A G ++ G + +PD + + A++ + + V V PL+ +
Sbjct: 113 INIAASFAESHGCEYVIAGFNGEEAKTFPDNSKEFVNAVDECFSYSTANGVKVLAPLIDM 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K + A ++G LE S +CY G + C C +C R++ ++
Sbjct: 173 DKVSIVRKAMELGAP------LEYSWSCYHGAEEP-------CGVCESCMRRKRAFL 216
>gi|29566196|ref|NP_817764.1| gp3 [Mycobacterium phage Rosebush]
gi|29424921|gb|AAN01845.1| gp3 [Mycobacterium phage Rosebush]
Length = 235
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 105/232 (45%), Gaps = 32/232 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
S L+L SGG DSST L+WALDR D+ L DYGQR+ VE V + W
Sbjct: 6 SPLVLLSGGMDSSTLLAWALDRPDVDQASALFVDYGQRHVVERASSQLVAQ---HYGAAW 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATL 122
+ L L G +S+LT +A ++ ++N+ T VP RN + AA +
Sbjct: 63 SE-------LDLRAFGASVNSALTV-MAREVPHGHYAEDNMVQTVVPNRNATLISAAAGI 114
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A LG ++ V D++ YPDCR + + AI+ A G HV P K + +
Sbjct: 115 AASLGHDAVLTAVHVGDHAVYPDCRPEFVAAIDMATFAGCGVHVV--APFQTGDKADIAR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGK-RDKRYEWGYGCNSCPACYLRQKGWME 233
L GGQ V L S CY G D R+ C C C R + + E
Sbjct: 173 L----GGQLGVPYHLTWS--CYEGGLNDARH-----CGRCGTCVERAEAFAE 213
>gi|291519766|emb|CBK74987.1| preQ(0) biosynthesis protein QueC [Butyrivibrio fibrisolvens 16/4]
Length = 228
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECR--LC----VRKKIVE 62
AL+L SGG DS+TCL A+ + + V LS YGQR+ E++ +C V ++
Sbjct: 3 ALVLVSGGVDSTTCLGMAVKEYGSENVVGLSIFYGQRHDKEIKAADAVCEHYNVEHITLD 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L ++ S D L G+I S + +A D +T+VP RN +FL A+ +
Sbjct: 63 LSTMFQFS---DCTLLQHSDGEIPEESYAEQLAKT--DGKPVSTYVPFRNGLFLSSASAI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A G + I G D +G YPDC A+ TAI G + + P + L K +
Sbjct: 118 ALSKGCSKIYYGAHSDDAAGNAYPDCSEAFNNAMNTAIYEGSGKQLQIEAPFINLTKAQV 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K +IG + E + +CY G C C C R+ +
Sbjct: 178 VKKGLEIG------VPYELTWSCYEGHEK-------ACGKCGTCIDRKAAF 215
>gi|90408081|ref|ZP_01216252.1| Predicted PP-loop superfamily ATPase [Psychromonas sp. CNPT3]
gi|90310838|gb|EAS38952.1| Predicted PP-loop superfamily ATPase [Psychromonas sp. CNPT3]
Length = 230
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVEL 63
K ++++SGG DS T L AL+ L+FDYGQR+ E+ +C+
Sbjct: 9 KMKKKVVVIYSGGMDSYTVLHKALEEGLVPFALTFDYGQRHIKEISVARDVCL------- 61
Query: 64 MPKWKDSLGEDH-ILPLAILGD-ISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLV 117
SL DH I+ ++ + + I SSLT + + + ++NN+ NT VP RN+I L
Sbjct: 62 ------SLNVDHKIIDISSINELIGGSSLTDSSIEVSSGEYENNNMINTVVPNRNMILLS 115
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A A +G + G D+ YPDCR + + + V++++P + K
Sbjct: 116 MAIGYAVSIGAEKVYYGAHSGDHEIYPDCRPIFVEKMNAVAEVANYEKVSIYSPYLNSDK 175
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K +G L ++ TCY G+ C C +C R + +
Sbjct: 176 IGILKDGLRMG------LDYSKTWTCYNGREKS-------CGVCASCIERLEAF 216
>gi|313673177|ref|YP_004051288.1| exsb protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939933|gb|ADR19125.1| exsB protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 221
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 32/231 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD- 69
++L SGG DS + A + + L +YGQ+ + KK +E K D
Sbjct: 4 GIVLVSGGLDSCVTAAIAKNMGYSLYFLHINYGQKTE----------KKELESFNKLADF 53
Query: 70 -SLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATLA 123
+ I+ ++ L I SSLT + +++I+ + +PNT+VP RN L A + A
Sbjct: 54 FKVVGKLIVDISYLKVIGGSSLTVD-SIEIERGDPFRKDIPNTYVPFRNGNILSIAVSWA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWLKKYETWK 182
+ I IGV E D SGYPDCR A + +G+ + + + TPL+ K E +
Sbjct: 113 EVIRADRIFIGVVEEDSSGYPDCRKQFYDAFNQILKVGLAYTDLLIETPLIDKTKGEIVR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G E + +CY G+ + C C +C LR KG+ E
Sbjct: 173 IGAKLGAP------FELTWSCY-GENE------VACGVCDSCLLRLKGFKE 210
>gi|268609644|ref|ZP_06143371.1| queuosine biosynthesis protein QueC [Ruminococcus flavefaciens
FD-1]
Length = 228
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK------KIVE 62
AL+LFSGG DSSTCL+ A+ ++ + V LS YGQ++ E++ + K K ++
Sbjct: 3 ALVLFSGGLDSSTCLALAVKKYGAENVVALSIYYGQKHNKEIQAAEKLVKYYGVTWKTLD 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L P + DS L D T ++ D +T+VP RN +FL AA++
Sbjct: 63 LAPIFADS-----DCSLLTQSDKEIPKETYAEQLEETDGKPVSTYVPFRNGLFLASAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A I G D +G YPDC A+ AI G + + P + L K +
Sbjct: 118 ALSNDCEVIYYGAHSDDAAGNAYPDCSAKFNNAMNEAIFTGSGEQLRIEAPFVDLNKADV 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
++ ++ N+ E + +CY G DK C C C R
Sbjct: 178 VRMGTEL------NVPYEMTWSCYEGG-DKP------CGVCGTCRDR 211
>gi|288869676|ref|ZP_05975624.2| ExsB protein [Methanobrevibacter smithii DSM 2374]
gi|288860993|gb|EFC93291.1| ExsB protein [Methanobrevibacter smithii DSM 2374]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 42/236 (17%)
Query: 11 ALLLFSGGQDS--STCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
A+ + SGG DS +TC+ +A D + ++F+YGQ++ K EL+ + KK
Sbjct: 6 AIAVLSGGLDSCVATCV-YAEDY--EIHGITFNYGQKSFKQELKASEEICKK-------- 54
Query: 68 KDSLGEDH-ILPLAILGDISHSSLTKNVA-----------MKIQDNNLPNTFVPGRNIIF 115
+G H ++ L L IS+SSLT + + I ++ + +VPGRNI+F
Sbjct: 55 ---MGFTHEVIDLPWLNKISNSSLTSDNEIPTLTHEELDDLDICEDTASSVWVPGRNIVF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
A + A +G I++G + + + +PD + + + +N+G ++ + P + L
Sbjct: 112 TSIATSYAESIGAEIIIVGWDKEEAATFPDNSKEFLESFNNMLNVGSPQNIEIKAPAIDL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K E KL +I +E S++CY G C C +C R++ +
Sbjct: 172 NKDEIVKLGDEIKAP------MELSYSCYTGHEKH-------CGVCESCMRRKRAF 214
>gi|222475966|ref|YP_002564487.1| exsB protein [Halorubrum lacusprofundi ATCC 49239]
gi|222454337|gb|ACM58601.1| exsB protein [Halorubrum lacusprofundi ATCC 49239]
Length = 229
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
SA++L SGG DS+T + A+++ L YGQR + E EC + +++
Sbjct: 5 SAVILVSGGMDSATAVYEAIEQGYEPYFLHTSYGQRTEDKEYECAKALAEEV-------- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
D+ HI L I SSLT + M++ D + +P ++VP RN L A + A
Sbjct: 57 DAADFLHI-ETGHLSQIGASSLT-DEEMEVADADMESDEIPTSYVPFRNANLLSMATSYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
+ IG D+SGYPDCR A + I++G E+ + + P + K E
Sbjct: 115 EATESEALFIGAHSEDFSGYPDCRPAFFDAFQNVIDVGTKPETAIELKAPFVEWSKTEIA 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++ ++ + + +CY RD+ C +C AC R + +
Sbjct: 175 KRGLEL------DVPYDMTWSCY---RDEE----PACGTCDACAFRLEAF 211
>gi|148642996|ref|YP_001273509.1| transcription regulator-related ATPase, ExsB [Methanobrevibacter
smithii ATCC 35061]
gi|167016437|sp|A5ULR3|QUEC_METS3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|148552013|gb|ABQ87141.1| transcription regulator-related ATPase, ExsB [Methanobrevibacter
smithii ATCC 35061]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 42/236 (17%)
Query: 11 ALLLFSGGQDS--STCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
A+ + SGG DS +TC+ +A D + ++F+YGQ++ K EL+ + KK
Sbjct: 6 AITVLSGGLDSCVATCV-YAEDY--EIHGITFNYGQKSFKQELKASEEICKK-------- 54
Query: 68 KDSLGEDH-ILPLAILGDISHSSLTKNVA-----------MKIQDNNLPNTFVPGRNIIF 115
+G H ++ L L IS+SSLT + + I ++ + +VPGRNI+F
Sbjct: 55 ---MGFTHEVIDLPWLNKISNSSLTSDNEIPTLTHEELDDLDICEDTASSVWVPGRNIVF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
A + A +G I++G + + + +PD + + + +N+G ++ + P + L
Sbjct: 112 TSIATSYAESIGAEIIIVGWDKEEAATFPDNSKEFLESFNNMLNVGSPQNIEIKAPAIDL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K E KL +I +E S++CY G C C +C R++ +
Sbjct: 172 NKDEIVKLGDEIKAP------MELSYSCYTGHEKH-------CGVCESCMRRKRAF 214
>gi|222445233|ref|ZP_03607748.1| hypothetical protein METSMIALI_00861 [Methanobrevibacter smithii
DSM 2375]
gi|222434798|gb|EEE41963.1| hypothetical protein METSMIALI_00861 [Methanobrevibacter smithii
DSM 2375]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 42/236 (17%)
Query: 11 ALLLFSGGQDS--STCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
A+ + SGG DS +TC+ +A D + ++F+YGQ++ K EL+ + KK
Sbjct: 6 AIAVLSGGLDSCVATCV-YAEDY--EIHGITFNYGQKSFKQELKASEEICKK-------- 54
Query: 68 KDSLGEDH-ILPLAILGDISHSSLTKNVA-----------MKIQDNNLPNTFVPGRNIIF 115
+G H ++ L L IS+SSLT + + I ++ + +VPGRNI+F
Sbjct: 55 ---MGFTHEVIGLPWLNKISNSSLTSDNEIPTLTNEELDDLDICEDTASSVWVPGRNIVF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
A + A +G I++G + + + +PD + + + +N+G ++ + P + L
Sbjct: 112 TSIATSYAESIGAEIIIVGWDKEEAATFPDNSKEFLESFNNMLNVGSPQNIEIKAPAIDL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K E KL +I +E S++CY G C C +C R++ +
Sbjct: 172 NKDEIVKLGDEIKAP------MELSYSCYTGHEKH-------CGVCESCMRRKRAF 214
>gi|92114160|ref|YP_574088.1| ExsB [Chromohalobacter salexigens DSM 3043]
gi|110816222|sp|Q1QVW9|QUEC_CHRSD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91797250|gb|ABE59389.1| preQ(0) biosynthesis protein QueC [Chromohalobacter salexigens DSM
3043]
Length = 251
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 96/232 (41%), Gaps = 40/232 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVELM 64
A++++SGG DS T L AL V LSF YGQR+ ELE RL + ++V++
Sbjct: 31 AVVIYSGGMDSYTVLHRALRAGFEVHALSFHYGQRHSRELETAHDVCQRLGIAHQVVDIR 90
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFA 119
AI G I +S+LT + + D +N+ T VP RN+I L A
Sbjct: 91 ---------------AIHGLIGNSALT-DATQTMPDGDYDADNMAATVVPNRNMILLSLA 134
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A +G G D+ YPDCR + + + + + V + P + K E
Sbjct: 135 IGHAVNIGANVCFYGAHGGDHVLYPDCRPEFVERMNDVAAIADFTPVRIAAPYLHASKEE 194
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L ++ TCYLG C C +C R +
Sbjct: 195 ILADGLAMG------LDYAQTWTCYLGAERS-------CGHCGSCRERLAAF 233
>gi|294338085|emb|CBJ93923.1| hypothetical phage protein [Campylobacter phage CP220]
Length = 219
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L SGG DSS L + DR++ +SF YG ++ + L KK+VE + K
Sbjct: 5 VLSLSGGLDSSALL---FEYKDRIKIAVSFKYGSNHQ---DKELAAAKKVVEEVNKLGAE 58
Query: 71 LGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E I+ L S+L + + N VP RN IFL A +A G
Sbjct: 59 I-EHRIIDLTTAFSTFKSALLSGSKAVPEAGSTEVSNVIVPFRNGIFLSILAGIAESEGC 117
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I I D + +PDCR+D I A+ AI LG E V V P + K D+
Sbjct: 118 RFIAIANHSGDSNVFPDCRYDFIDAMFKAIGLGTEDKVQVFAPYTNITK-------TDLT 170
Query: 189 GQDLVNLILEE-SHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + N + + +++CY G CN CP C R K E
Sbjct: 171 IRGMTNGLNPDWAYSCYKGGNKP-------CNVCPTCVDRNKAVQE 209
>gi|288559694|ref|YP_003423180.1| queuosine biosynthesis protein QueC [Methanobrevibacter ruminantium
M1]
gi|288542404|gb|ADC46288.1| queuosine biosynthesis protein QueC [Methanobrevibacter ruminantium
M1]
Length = 211
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 28/229 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE--CRLCVRKKIVELMPKWK 68
+L+ SGG DS+T L L+ + V LSF+YGQ+ +E+E +C +
Sbjct: 5 VVLILSGGLDSTTLLYKLLNEGNNVTALSFNYGQKAAIEIERASEICKMNDV-------- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + + D+ SSLT +Q+ +T VP RN I L A A +
Sbjct: 57 ----NHFVFDIRNIVDLLSSSLTDKDNDNVQEPK--STVVPSRNTILLELATAFAISNNL 110
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ G + D YPD + ++ I + ++ V P + K + KLA ++G
Sbjct: 111 EEVYYGAIKADTGDYPDTTPEFLKQINELNKVNNYEYIPVCAPFIDTDKKDVVKLALELG 170
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +E++ +CY+ G C C +C R + E KE+
Sbjct: 171 ------VPIEKTWSCYVNND------GTPCGECFSCKSRIEAIKEAKEE 207
>gi|167754372|ref|ZP_02426499.1| hypothetical protein ALIPUT_02666 [Alistipes putredinis DSM 17216]
gi|167658997|gb|EDS03127.1| hypothetical protein ALIPUT_02666 [Alistipes putredinis DSM 17216]
Length = 218
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 32/225 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKD 69
++++ SGG DS T L ++ ++FDYG NK E EC +
Sbjct: 4 SVIIVSGGMDSITLLHEKVEEI--ALAVTFDYGSNHNKREAEC-----------AARHCQ 50
Query: 70 SLGEDHIL-PLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG +HI+ PLA +G SSL + + N+ +T VP RN I L A LA
Sbjct: 51 QLGIEHIIIPLAFIGQYFKSSLLEGADAVPEGHYEAENMKSTVVPFRNGIMLSVACGLAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++I D++ YPDCR + ++ A+ G V + P ++K + ++
Sbjct: 111 SRKLSKVLIANHGGDHAIYPDCRAGFVHSMSEAMRHGTYIGVQIDAPYTGIRKSDIARIG 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ +G L +++CY G C C C R++
Sbjct: 171 KRLG------LDYSTTYSCYKGGEKH-------CGKCGTCVERKE 202
>gi|294338282|emb|CBJ94320.1| hypothetical phage protein [Campylobacter phage CPt10]
Length = 219
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L SGG DSS L + DR++ +SF YG ++ + L KK+VE + K
Sbjct: 5 VLSISGGLDSSALL---FEYKDRIKIAVSFKYGSNHQ---DRELAAAKKVVEEVNKLGAE 58
Query: 71 LGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E I+ L S+L + + N VP RN IFL A +A G
Sbjct: 59 I-EHRIIDLTTAFSTFKSALLSGSKAVPEAGSTEVSNVIVPFRNGIFLSILAGIAESEGC 117
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I I D + +PDCR+D I A+ AI LG E V V P + K D+
Sbjct: 118 RFIAIANHSGDSNVFPDCRYDFIDAMFKAIGLGTEDKVQVFAPYTNITK-------TDLT 170
Query: 189 GQDLVNLILEE-SHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + N + + +++CY G CN CP C R K E
Sbjct: 171 IRGMANGLNPDWTYSCYKGGNKP-------CNVCPTCVDRNKAVQE 209
>gi|189499746|ref|YP_001959216.1| exsB protein [Chlorobium phaeobacteroides BS1]
gi|254764321|sp|B3ENV8|QUEC_CHLPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189495187|gb|ACE03735.1| exsB protein [Chlorobium phaeobacteroides BS1]
Length = 226
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 33/230 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPKW 67
A++L SGG DS + A + + +YGQR + EL R+C I +
Sbjct: 3 AVVLISGGMDSLVVAAQARALGYELAAMHVNYGQRTWQKELTAFRRICSHYAIERKLE-- 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ A L I SSLT + +Q +P+++VP RN FL A + +
Sbjct: 61 ---------VDAAYLEHIGGSSLTDSSIPVEQADLQTVAIPSSYVPFRNASFLSMAVSWS 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
+G I IG E D SGYPDCR A I LG E+ + + TPL+ L+K E
Sbjct: 112 EVIGAERIFIGAVEEDSSGYPDCRKIFYDAFNKVIELGTKPETTIEIRTPLIDLQKSEIV 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++ ++ S +CY + G C C +C R + +
Sbjct: 172 RKGVEL------DVPFFHSWSCYKSE-------GKACGLCDSCARRLRAF 208
>gi|292655863|ref|YP_003535760.1| exsB protein [Haloferax volcanii DS2]
gi|291372353|gb|ADE04580.1| exsB protein [Haloferax volcanii DS2]
Length = 244
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 25/232 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T A R + L YGQ K E + C R+ EL +D
Sbjct: 12 AVVLLSGGMDSATTAYEATRRGYELYALHTSYGQ--KTESKEYDCARELADEL--DARDF 67
Query: 71 LGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L HI + L I SSLT + + +++P ++VP RN L A + A
Sbjct: 68 L---HI-ETSHLKQIGASSLTDDSMAVADADVDADDIPTSYVPFRNANLLSMAVSYAEAN 123
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ +G DYSGYPDCR + A E +++G + T+ + ++ +T D
Sbjct: 124 DCDAVFVGAHSEDYSGYPDCRPEFFDAFEAMVDVGTKPDTTISLEVPFVHDSKT-----D 178
Query: 187 IGGQDL-VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
I + L + + E + +CY + C +C +C R + + E+
Sbjct: 179 IARRGLELGVPFEHTWSCYRAEEP-------ACGTCDSCAFRLQAFQNLGER 223
>gi|196230867|ref|ZP_03129728.1| exsB protein [Chthoniobacter flavus Ellin428]
gi|196225208|gb|EDY19717.1| exsB protein [Chthoniobacter flavus Ellin428]
Length = 232
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++L SGG DS L V LSFDYG ++ K + L + L
Sbjct: 7 VVLVSGGMDSVAALYHTQAEHPVVGALSFDYGSKHN----------HKEIPLAAYHCERL 56
Query: 72 GEDH-ILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATLAYR 125
G H ++PL+ + ++ S L ++ I D + + T VP RN I L A A
Sbjct: 57 GVPHRVIPLSFINELFASDLLQS-GGAIPDGHYEELTMKQTVVPFRNGIMLSIAGGYAES 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++I D++ YPDCR ++A+ AI LG + + + P + K +
Sbjct: 116 VGAQGLIIAAHAGDHAIYPDCREAFMQAMGEAIRLGTYAEIQLLRPFIHFSKAQIAARGH 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G + ++ +CY G+ C +C C R++ +
Sbjct: 176 ELG------VDFAKTWSCYKGQEIH-------CGTCGTCVERREAF 208
>gi|260912184|ref|ZP_05918738.1| transcription regulator ExsB [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633711|gb|EEX51847.1| transcription regulator ExsB [Prevotella sp. oral taxon 472 str.
F0295]
Length = 217
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 34/230 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKIVELMPKW 67
++++ SGG DS T L D +SFDYG N++ L C R I +
Sbjct: 4 SVIVVSGGMDSITLLYEKKDEI--ALGISFDYGSNHNHNELPLAALHCQRLGIAHV---- 57
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
++PL + SSL ++ A ++N+ +T VP RN I L AA +A
Sbjct: 58 --------VIPLGFMHQYFKSSLLESGANIPDGSYDEDNMKSTVVPFRNGIMLAVAAGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G+T ++I D++ YPDCR + I A++ A+ G ++V V P + K + +
Sbjct: 110 ESNGLTKVLIANHGGDHTIYPDCRPEFIAAMDAAVKAGTFANVHVVAPYTNISKADIARK 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G + E+ +CY G C +C C R++ E
Sbjct: 170 GSFLG------IDYAETWSCYKGGDVH-------CGTCGTCVERKEALRE 206
>gi|302870892|ref|YP_003839528.1| exsB protein [Caldicellulosiruptor obsidiansis OB47]
gi|302573751|gb|ADL41542.1| exsB protein [Caldicellulosiruptor obsidiansis OB47]
Length = 217
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 27/223 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++ SGG DS+T L ++ V +SF YGQ++ ELE KK L+ L
Sbjct: 1 MVLSGGMDSTTLLYDVKNQGYEVFAISFLYGQKHSKELE----FAKKTCSLL------LV 50
Query: 73 EDHILPLAILGDISHSSLTK---NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
I+ ++ +++ S+LT NV D+ + T VP RN++ L +A A LG
Sbjct: 51 PHKIVDISFFAELAPSALTMPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGA 110
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ G D+ YPDCR + + A++ A+ L + + P + +KK + K ++G
Sbjct: 111 KKLFYGAHAGDHPIYPDCRKEFVEAMKKALYLADYIGLELEAPYVDMKKEDILKRGLELG 170
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
V+ L + +CY G + C C C R + +
Sbjct: 171 ----VDYSL--TWSCYKGGQK-------ACGRCGTCTERIEAF 200
>gi|260585060|ref|ZP_05852802.1| ExsB protein [Granulicatella elegans ATCC 700633]
gi|260157256|gb|EEW92330.1| ExsB protein [Granulicatella elegans ATCC 700633]
Length = 214
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DSST LS AL + +VE +SF Y Q++K ELE + +P
Sbjct: 3 LVLLSGGVDSSTALSLALSQDPQVEAISFSYNQKHK-ELELEAARKIAAYYKVPH----- 56
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAATLAYRL 126
IL ++ + S SSL +++ + NT V RN IF+ A +A +
Sbjct: 57 ---QILEVSSIFSGSKSSLNAGNDIEVSTGDYATQTEANTEVEFRNGIFISILAGIAMQK 113
Query: 127 GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G + I G D SG YPDC + I A+ A+ LG V + P +KK +
Sbjct: 114 GASEIYFG-AHLDDSGVIYPDCSPEFIEAMNQAVQLGSGGKVRLTAPFGQVKKKDIVAKG 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++G + E +++CY G C C C R K ++
Sbjct: 173 VELG------VPYELTYSCYNGVYPP-------CGKCGTCIDRNKAFL 207
>gi|222528233|ref|YP_002572115.1| exsB protein [Caldicellulosiruptor bescii DSM 6725]
gi|254764298|sp|B9MMB0|QUEC_ANATD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|222455080|gb|ACM59342.1| exsB protein [Caldicellulosiruptor bescii DSM 6725]
Length = 221
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP-KWKD 69
A+++ SGG DS+T L + V +SF YGQ++ ELE KK L+ +K
Sbjct: 3 AVVVLSGGMDSTTLLYDVKSQGYEVFAISFLYGQKHSKELE----FAKKTCSLLSIPYK- 57
Query: 70 SLGEDHILPLAILGDISHSSLTK---NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ ++ +++ S+LT NV D+ + T VP RN++ L +A A
Sbjct: 58 ------IVDISFFAELAPSALTTPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAIS 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG + G D+ YPDCR + + A++ A+ L + + P + +KK + +
Sbjct: 112 LGAKKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELEAPYVDMKKEDILRRGL 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++G VN L + +CY G + C C C R + +
Sbjct: 172 ELG----VNYSL--TWSCYKGGQK-------ACGRCGTCTERIEAF 204
>gi|110597996|ref|ZP_01386277.1| ExsB [Chlorobium ferrooxidans DSM 13031]
gi|110340445|gb|EAT58934.1| ExsB [Chlorobium ferrooxidans DSM 13031]
Length = 226
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPKW 67
A++L SGG DS + A + + + +YGQR EL +C I +
Sbjct: 3 AVVLLSGGMDSLVTTAMAHEHGFELAAMHVNYGQRTWHKELASFRDICNHYNIDRRLEVD 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L A +G S + L+ V+ +Q + +P ++VP RN FL A + + +
Sbjct: 63 ADFL--------ARIGGSSLTDLSMPVSGADLQGSEIPTSYVPFRNANFLSMAVSWSEVI 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWKLA 184
G I IG E D SGYPDCR A I LG + T+ TPL+ ++K +
Sbjct: 115 GANRIFIGAVEEDSSGYPDCRKIFYEAFNQVIALGTKPETTIEIVTPLIEMQKSDIVHRG 174
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+++ S +CY + G C C +C R + +
Sbjct: 175 M------LLDVPFAYSWSCYKSE-------GRACGVCDSCARRLRAF 208
>gi|150401201|ref|YP_001324967.1| exsB protein [Methanococcus aeolicus Nankai-3]
gi|167016433|sp|A6UV33|QUEC_META3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|150013904|gb|ABR56355.1| exsB protein [Methanococcus aeolicus Nankai-3]
Length = 234
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ C++ A + +++FDYGQR V+K+I+ K +
Sbjct: 3 AVCVLSGGLDSAVCMAMAKSEGLELYSITFDYGQR---------AVKKEII-ASKKLSEL 52
Query: 71 LGEDH-ILPLAILGDISHSSLTKN--VAMKIQDNNLPN----------TFVPGRNIIFLV 117
G H ++ L + D S S+LTK I+++ L N +VP RN+I
Sbjct: 53 FGAVHKVVELPFVKDFSSSALTKKEEEVPTIKNSELDNLEKATETMEKVWVPARNMILFS 112
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
++ A + I G+ + + +PD + + + + G + V + +PL K
Sbjct: 113 ISSGFAEFVDAKYIYTGLNVEEGATFPDNTEEFLNRFNSVLEYGTLNKVKMKSPLYKYSK 172
Query: 178 YETWKLAQDIGGQDLVNL-ILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E K+ + + ++ +N+ L+ S++CY D + ++ + C +C +C R++ + E
Sbjct: 173 KEIVKIGKKL--EEKLNVEFLKYSYSCY---HDNKTDFLH-CGTCESCMRRKRAFKE 223
>gi|171463094|ref|YP_001797207.1| exsB protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171192632|gb|ACB43593.1| exsB protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 208
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 20 DSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPL 79
DS+T L+ A D LS YGQR+ EL + K+I + ++ L
Sbjct: 23 DSTTVLALAKDSDYTPYALSVGYGQRHSSELAAAKHIAKQI---------GVARHEVVNL 73
Query: 80 AILGDISHSSLT-KNVAMKI---QDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGV 135
L S+LT +A+ +D+ +P T+VP RN I L A LG +I G
Sbjct: 74 D-LTRFGGSALTDTKIAVPTSPGKDHEIPVTYVPARNTILLSLALGWTESLGGLDIFYGA 132
Query: 136 CETDYSGYPDCRHDTIRAIETAINLGMESHVT---------VHTPLMWLKKYETWKLAQD 186
DYSGYPDCR + + + E NL ++ V VH P++ L K + +L
Sbjct: 133 NSVDYSGYPDCRPECVASFEHMANLATKAGVEAINNKNRFRVHAPIVSLTKAQIIQLGST 192
Query: 187 IG 188
+G
Sbjct: 193 MG 194
>gi|34541004|ref|NP_905483.1| exsB protein [Porphyromonas gingivalis W83]
gi|81417265|sp|Q7MV08|QUEC_PORGI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|34397319|gb|AAQ66382.1| exsB protein [Porphyromonas gingivalis W83]
Length = 220
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+++ +L++ SGG DS T + R LSFDYG ++ + +
Sbjct: 1 MQREKDSLIVVSGGMDSVTLMYE--KRASIALALSFDYGSKHNA----------RELSFA 48
Query: 65 PKWKDSLGEDH-ILPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNIIFLVFA 119
+ LG +H I+PL +G S L + + + N+ +T VP RN I L A
Sbjct: 49 RLHAERLGVEHLIIPLDFIGQYFQSDLLLSGGDIPEGRYDEENMKSTVVPFRNGIMLAVA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA G+ I I D++ YPDCR IR + A+ G + V + P + K +
Sbjct: 109 AGLAESRGLRRIYIANHFGDHAIYPDCRASFIRPMTEAVRCGTTNGVLIEAPYTDITKTD 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
++ +G + E+ +CY G + C C C R++
Sbjct: 169 IARIGASLG------IDYAETWSCYKGGV-------FHCGVCGTCVERRE 205
>gi|312623408|ref|YP_004025021.1| exsb protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312203875|gb|ADQ47202.1| exsB protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 221
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++ SGG DS+T L + V +SF YGQ++ ELE KK L+
Sbjct: 3 AVVVLSGGMDSTTLLYDVKSQGYEVFAISFLYGQKHSKELE----FAKKTCSLLSI---- 54
Query: 71 LGEDHILPLAILGDISHSSLTK---NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ ++ +++ S+LT NV D+ + T VP RN++ L +A A L
Sbjct: 55 --PHKIVDISFFAELAPSALTALDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G + G D+ YPDCR + + A++ A+ L + + P + +KK + K +
Sbjct: 113 GAKKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELDAPYVDMKKEDILKRGLE 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G V+ L + +CY G + C C C R + +
Sbjct: 173 LG----VDYSL--TWSCYKGGQK-------ACGRCGTCTERIEAF 204
>gi|188994962|ref|YP_001929214.1| probable succinoglycan biosynthesis regulator ExsB protein
[Porphyromonas gingivalis ATCC 33277]
gi|254764365|sp|B2RJS2|QUEC_PORG3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|188594642|dbj|BAG33617.1| probable succinoglycan biosynthesis regulator ExsB protein
[Porphyromonas gingivalis ATCC 33277]
Length = 220
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+++ +L++ SGG DS T + R LSFDYG ++ + +
Sbjct: 1 MQREKDSLIVVSGGMDSVTLMYE--KRASIALALSFDYGSKHNA----------RELSFA 48
Query: 65 PKWKDSLGEDH-ILPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNIIFLVFA 119
+ LG +H I+PL +G S L + + + N+ +T VP RN I L A
Sbjct: 49 RLHAERLGVEHLIIPLDFIGQYFQSDLLLSGGDIPEGRYDEENMKSTVVPFRNGIMLAVA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA G+ I I D++ YPDCR IR + A+ G + V + P + K +
Sbjct: 109 AGLAESRGLRRIYIANHFGDHAIYPDCRASFIRPMTEAVRCGTTNGVLIEAPYTDITKTD 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
++ +G + E+ +CY G + C C C R++
Sbjct: 169 IARIGASLG------IDYAETWSCYKGGV-------FHCGVCGTCVERKE 205
>gi|288928273|ref|ZP_06422120.1| ExsB protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288331107|gb|EFC69691.1| ExsB protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 217
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKIVELMPKW 67
++++ SGG DS T L D +SFDYG N++ L C R I +
Sbjct: 4 SVIVVSGGMDSVTLLYEKKDEI--ALGISFDYGSNHNHNELPLAALHCQRLGIAHV---- 57
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-----NLPNTFVPGRNIIFLVFAATL 122
++PL + SSL ++ I D N+ +T VP RN + L AA +
Sbjct: 58 --------VIPLGFMHQYFKSSLLES-GESIPDGSYDEENMKSTVVPFRNGVMLAVAAGI 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G+T ++I D++ YPDCR + I A++ A+ G + V V P + K + +
Sbjct: 109 AESNGLTKVLIANHGGDHTIYPDCRPEFIAAMDAAVEAGTFARVRVVAPYTNISKADIAR 168
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G + E+ +CY G C +C C R++ E
Sbjct: 169 RGRALG------IDYAETWSCYKGGDVH-------CGTCGTCVERKEALRE 206
>gi|290967794|ref|ZP_06559347.1| protein ExsB [Megasphaera genomosp. type_1 str. 28L]
gi|290782153|gb|EFD94728.1| protein ExsB [Megasphaera genomosp. type_1 str. 28L]
Length = 226
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECR------LCVRKKIVEL 63
L+L SGG DS+TCL+ + ++ E L+ YGQ++ EL+ V + +++
Sbjct: 4 LVLLSGGIDSTTCLALGVKKYGASELLAVTAYYGQKHAKELQAARNVAAYYGVAHREIDV 63
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S D L G I+H+S + +A K L +T+VP RN +FL FAA LA
Sbjct: 64 SQAFTLS---DCPLLAGRKGAIAHTSYSDQLAAKGGAGTL-DTYVPFRNGLFLSFAAALA 119
Query: 124 YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + I G D +G YPDC + +A+ TAI G + PL+ W
Sbjct: 120 VSVHASCIYYGAHADDAAGRAYPDCTPEFEQAMATAIYEGSGKTCRLEAPLL------QW 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
AQ + ++ + +CY G+ C C C R +
Sbjct: 174 NKAQVVRQGLQLHAPYHLTWSCYEGREKP-------CGLCGTCRDRAAAF 216
>gi|291547691|emb|CBL20799.1| preQ(0) biosynthesis protein QueC [Ruminococcus sp. SR1/5]
Length = 227
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECR------LCVRKKIVE 62
AL+L SGG DS+TCL A++++ + V L+ YGQ++ E+E V ++
Sbjct: 3 ALVLASGGVDSTTCLGLAVNKYGKENVIALTVAYGQKHTKEIEAARKTAEYYEVEHLYLD 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L P ++ S D L +I H S + +K D + +T+VP RN +FL AA++
Sbjct: 63 LEPIFRYS---DCSLLKHSDREIPHESYAEQ--LKETDGSPVSTYVPFRNGLFLSSAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + I G D +G YPDC AI AI G + V P + K E
Sbjct: 118 ALSKNCSVIYYGAHADDAAGNAYPDCSSAFHNAINEAIYQGSGGQLKVEAPFVSCTKAEV 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K ++ N+ E + +CY G C C C R + +
Sbjct: 178 VKTGLEL------NVPYELTWSCYEGGEKP-------CGVCGTCIDRAEAF 215
>gi|119477972|ref|ZP_01618072.1| exsB protein [marine gamma proteobacterium HTCC2143]
gi|119448885|gb|EAW30127.1| exsB protein [marine gamma proteobacterium HTCC2143]
Length = 218
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE--CRLCVRKKIVELMPKWKD 69
++++SGG DS T L+ AL V +SF+YGQR+ EL+ R C IV +
Sbjct: 4 VVIYSGGIDSFTILNKALQEGHDVLAISFNYGQRHNKELDYAARACKELGIVHKLVDIS- 62
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDN-----NLPNTFVPGRNIIFLVFAATLAY 124
A+ +S+SSL + I + N+ +T VP RN+I + A A
Sbjct: 63 ----------AMQTLMSNSSLMAKSDVIIPEGHYEAENMKSTVVPNRNMILISLAIGYAV 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G + + G D++ YPDCR + + A+ A L + V P + K K
Sbjct: 113 NEGASEVWYGAHAGDHTIYPDCRPEFVEAMSKASLLANFEPIAVVAPYLNTDKIAIVKEG 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G L ++ TCY G+ C C +C R + + E
Sbjct: 173 LAMG------LDYGKTWTCYNGREK-------ACGKCGSCVERLEAFAE 208
>gi|322369254|ref|ZP_08043819.1| exsB protein [Haladaptatus paucihalophilus DX253]
gi|320550986|gb|EFW92635.1| exsB protein [Haladaptatus paucihalophilus DX253]
Length = 256
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 32/242 (13%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIV 61
D + A++L SGG DS+T A +R L YGQR + E +C +++
Sbjct: 27 DTGRPEKRAVILASGGMDSATAAYEARERGYEPFFLHTSYGQRTESKEFDC---AKRQAD 83
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFL 116
EL + G H+ + L I SSLT + M ++D +L P+T+VP RN L
Sbjct: 84 EL------NAGFLHV-ETSHLAKIGGSSLTDD-EMTVEDADLESDEVPDTYVPFRNANLL 135
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMW 174
A + A + IG D+SGYPDCR A + ++ G + ++ P +
Sbjct: 136 SMAVSCAEANDCDAVFIGAHSEDFSGYPDCRPQFFEAFQAVVDTGTKDDTSIELVAPFVE 195
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K + + ++ ++ E + +CY + C +C +C LR + +
Sbjct: 196 FSKTDIAERGVEL------DVPYELTWSCYRAEEP-------ACGTCDSCALRLQAFQNV 242
Query: 235 KE 236
E
Sbjct: 243 GE 244
>gi|257064933|ref|YP_003144605.1| exsB protein [Slackia heliotrinireducens DSM 20476]
gi|256792586|gb|ACV23256.1| exsB protein [Slackia heliotrinireducens DSM 20476]
Length = 235
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 27/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK--IVELMPK 66
A++L SGG DS+TCL+ A ++F D V ++S YGQR+ EL C V K + +
Sbjct: 10 AMVLSSGGVDSTTCLALACEQFGADNVTSVSVFYGQRHNKELACADAVAKHYGVAHHVLD 69
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAY 124
+ L + A++ D + ++ A +I +N + NT+VP RN + L LA
Sbjct: 70 LANILANSNN---ALMADSTQEIDHRDYATQIAENEDGMVNTYVPFRNGLMLSAVTALAI 126
Query: 125 RLGITN-----IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
L T + + YPDC + AI AI LG + P + + K +
Sbjct: 127 SLNPTEKTAIYLGAHADDAAGGAYPDCTPEFFEAIARAIELGSYGKAVLREPFVNVNKAD 186
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + E + +CY G C +C C R K +
Sbjct: 187 VVACGLKLG------VPYELTWSCYEGGDAP-------CGTCATCIDRAKAF 225
>gi|311696705|gb|ADP99578.1| ExsB protein [marine bacterium HP15]
Length = 209
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 20 DSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH-ILP 78
DS T L A +R +V LSF+YGQR+ ELEC V ++LG H ++
Sbjct: 2 DSYTLLHLARERGYQVHALSFNYGQRHVRELECARSV-----------CEALGVPHKVID 50
Query: 79 LAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ + ++ + SSLT ++ + +++++ T VP RN+I L A A G + G
Sbjct: 51 IRAMSEVMAGSSLTSDIDVPEGHYEEDSMKATVVPNRNMILLSLATGYAVTAGAGAVWYG 110
Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
D++ YPDCR + + ++ + V + P M + K + +G
Sbjct: 111 AHGGDHAIYPDCRPEFVDKMDAVCRVANYEPVGIEAPFMTMDKGQILAEGLRLG------ 164
Query: 195 LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L ++ TCY G+ C C +C R + +
Sbjct: 165 LDYAQTWTCYNGRER-------ACGRCGSCVERLEAF 194
>gi|15679119|ref|NP_276236.1| hypothetical protein MTH1108 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|41018374|sp|O27180|QUEC_METTH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|2622210|gb|AAB85597.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
gi|3023053|gb|AAC12720.1| ORF2R [Methanothermobacter thermautotrophicus]
Length = 222
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ + +D ++ + ++FDYGQR+ + +E + +
Sbjct: 3 AISILSGGMDSAVATALMMDEYE-IHAITFDYGQRSA----------RMELEYARRLSEH 51
Query: 71 LGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNT----------FVPGRNIIFLVFA 119
LG +H L L LG + S LT + +NL +T +VPGRN++F
Sbjct: 52 LGIEHTTLDLQWLGRLGGSVLTAGGDIP-SPSNLDDTVECLETARKVWVPGRNLVFTSIG 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A + +++G + +PD + + A + +G V V P++ + K E
Sbjct: 111 VSFAEAMDAGAVIVGWDLEEAETFPDNSEEFLDAFNRLLEIGTLDGVRVVAPVIGMTKRE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++G L E +++CY G R C C +C R++ +
Sbjct: 171 IVEAGHEVG------LPFELTYSCYAGDR-------VHCGVCESCMRRRRAF 209
>gi|297561372|ref|YP_003680346.1| exsB protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296845820|gb|ADH67840.1| exsB protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 243
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 32/232 (13%)
Query: 10 SALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ +++FSGG DS+T L+ +A RF R+ ++ +YGQR+ E++ + +
Sbjct: 17 TVVVVFSGGMDSTTLLAHFAALRF-RLVAVTVEYGQRHGKEVDAARAIARHYG------- 68
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATLA 123
E HIL +A G + S + +++ D + + +T VP RN + AA++A
Sbjct: 69 ---AEHHILGIAGFGPLLRGSALTDARVEVPDGHYAEESMRDTVVPNRNAVLANLAASVA 125
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKYETW 181
+ +G+ D+ YPDCR + A+ + + E V P M K +
Sbjct: 126 VARRAGTVALGMHSGDHFVYPDCRPAFVDALRHLVGVANEGFAAPRVEAPFMAWSKADIA 185
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G LE S +CY G C +C CY R++ + E
Sbjct: 186 RHGVRLGAP------LEHSWSCYKGGDIH-------CGTCGTCYERREAFQE 224
>gi|256827670|ref|YP_003151629.1| exsB protein [Cryptobacterium curtum DSM 15641]
gi|256583813|gb|ACU94947.1| exsB protein [Cryptobacterium curtum DSM 15641]
Length = 240
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 41/234 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL+L SGG DS+TCL+ A+DRF + V T+SF YGQR+ EL+ V
Sbjct: 15 ALVLSSGGVDSTTCLALAVDRFGQANVSTVSFFYGQRHSRELDAAAAV-----------A 63
Query: 69 DSLGEDH-ILPLAILGDISHSSL----TKNV-----AMKIQDNNLPNTFVPGRN-IIFLV 117
+ G H +L LA + S+++L T++V A +++D+ PNT+VP RN ++
Sbjct: 64 EHYGVHHYVLDLASVMHYSNNALMATSTQHVPHGSYAQQMEDDGHPNTYVPFRNGLMLSA 123
Query: 118 FAATLAYRLGITN--IVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
AA A T+ + +G D +G YPDC + AI+ G +V + TP +
Sbjct: 124 AAALAASLFPDTSCALYLGAHADDAAGNAYPDCSPAFTAHMGRAISFGTYGNVRLETPFV 183
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
K AQ + + + E + +CY G C +C C R
Sbjct: 184 NQNK------AQVVAEGLRLGVPYEMTWSCYEGGEKP-------CGTCATCLDR 224
>gi|313891425|ref|ZP_07825041.1| protein ExsB [Dialister microaerophilus UPII 345-E]
gi|329121409|ref|ZP_08250034.1| transcription regulator ExsB [Dialister micraerophilus DSM 19965]
gi|313120200|gb|EFR43376.1| protein ExsB [Dialister microaerophilus UPII 345-E]
gi|327469699|gb|EGF15166.1| transcription regulator ExsB [Dialister micraerophilus DSM 19965]
Length = 230
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TC+S A+D+ R V T S YGQ+++ ELEC +K+ +
Sbjct: 4 AIILSSGGVDSTTCISVAVDKLGRENVATASIFYGQKHEKELEC----ARKVAQFYNLKH 59
Query: 69 DSLGEDHIL-----PLAILG--DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L PL +I H+S + V +++ T+VP RN + L AA+
Sbjct: 60 YEFNLAQVLQYSNCPLLAKSTKEIEHASYEEQVR---ENSGKVATYVPFRNGLMLSVAAS 116
Query: 122 LA---YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
LA + T I IG D +G Y DC + ++++ AI +G V + P
Sbjct: 117 LAASIFENEETGIYIGAHADDAAGNAYADCSEEFLKSMNDAIMIGTYEKVKLVFPFANTN 176
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K A + + E + +CY G C +C C RQK + E
Sbjct: 177 K------AGVVATGLKLKTPYELTWSCYEGGEKP-------CGTCGTCIDRQKAFEE 220
>gi|71278544|ref|YP_269637.1| exsB protein [Colwellia psychrerythraea 34H]
gi|110816204|sp|Q47ZY2|QUEC2_COLP3 RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
gi|71144284|gb|AAZ24757.1| exsB protein [Colwellia psychrerythraea 34H]
Length = 219
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++++SGG DS T L+ A+ V LSFDYGQ++ EL + ++
Sbjct: 5 VVIYSGGMDSFTALNKAVKEGFDVYALSFDYGQKHNKEL---------------IYAQNV 49
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN----------TFVPGRNIIFLVFAAT 121
+ +P IL S S+L + ++ D N+P+ T VP RN+I + A
Sbjct: 50 CNELNVPHKILDIKSISTLFTSSSLVSDDINVPDGHYEADNMKSTVVPNRNMILISLAIG 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + + G D+ YPDCR + ++ ++ A + V VH P + K
Sbjct: 110 YAVDIEAEGVWYGAHSGDHLIYPDCRPEFVKVMDQASKVANFEPVYVHAPYLNTDKIGIL 169
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K +G L ++ TCY GK C +C +C R + +
Sbjct: 170 KDGIKMG------LDYSKTWTCYQGKEK-------ACGTCGSCVERLEAF 206
>gi|325958150|ref|YP_004289616.1| exsB protein [Methanobacterium sp. AL-21]
gi|325329582|gb|ADZ08644.1| exsB protein [Methanobacterium sp. AL-21]
Length = 228
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 38/234 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS T S ++ L+F+YGQ++ ++E++ V K+
Sbjct: 5 AITVLSGGLDS-TVASAKFREDYQIHALTFNYGQKSAEMEIKSAKAVCKE---------- 53
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAM-KIQDNNL----------PNTFVPGRNIIFLV 117
LG +H ++ L L ++ +S+LT ++ + +D+ L + +VPGRN++F
Sbjct: 54 -LGAEHTVIELPWLAELGNSALTSEESIPEPEDSELDDIESALKTAKSVWVPGRNVVFTA 112
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A + A + I++G + +PD + + A T + +G + + PL+ + K
Sbjct: 113 IANSFAEAENASIIIVGWDLEEAVTFPDNSKEFLEAFNTVLEVGSFDVIKIEAPLIGMNK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + IG +E S++CY G Y C C +C R++ +
Sbjct: 173 NEIVEYGDSIGAP------MELSYSCYKG-------LNYHCGVCESCMRRKRAF 213
>gi|327312420|ref|YP_004327857.1| queuosine biosynthesis protein QueC [Prevotella denticola F0289]
gi|326944366|gb|AEA20251.1| queuosine biosynthesis protein QueC [Prevotella denticola F0289]
Length = 230
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 38/232 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKIVELMPK 66
++++ SGG DS T L +DR ET+ SFDYGQ + K +
Sbjct: 16 SVIIVSGGLDSITLL------YDRAETIALAVSFDYGQNHGA----------KELPFAAH 59
Query: 67 WKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
LG HI +PL+ + SSL + N+ +T VP RN I L A
Sbjct: 60 HCRKLGIPHITIPLSFMHRFFKSSLLDGAEAIPEGHYAEENMKSTVVPFRNGIMLAIATG 119
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A G+ + I D++ YPDCR D I+A++ A G +V + P + K +
Sbjct: 120 IAESHGLRRVYIANHGGDHTIYPDCRPDFIQAMDGAATAGTFVNVRIEAPYTNITKADIV 179
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G + ++ +CY G C C C R++ ++E
Sbjct: 180 RRGTALG------VDYSKTWSCYKGSD-------VHCGKCGTCVERKEAFLE 218
>gi|171914503|ref|ZP_02929973.1| exsB protein [Verrucomicrobium spinosum DSM 4136]
Length = 226
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 99/238 (41%), Gaps = 43/238 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELEC------RLCVRKKIVELM 64
L+L SGG DS T L WA + +SFDYG + N E+ +L VR ++ L
Sbjct: 4 LVLLSGGMDSVTALYWAARETEVAGCVSFDYGSKHNAKEIPMAAWHAQQLGVRHDVIRL- 62
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ D L +L GDI ++ ++ T VP RN I L A LA
Sbjct: 63 -DFMDQLFASDLLKSG--GDIPDG--------HYEEQSMKRTVVPFRNGIMLAIACGLAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+VI D++ YPDCR ++++ +A+ G + V + P + K KL
Sbjct: 112 SQEAGGVVIAAHSGDHAIYPDCREPFMQSMASAMMCGTYAQVELLRPFIAQDKAGIAKLG 171
Query: 185 QDIGGQDLVNLILEESHT--CYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
G ++ SHT CY G C +C C +E +E +QD
Sbjct: 172 TAYG--------VDFSHTWSCYKGGDIH-------CGTCGTC-------VERREAFQD 207
>gi|305663007|ref|YP_003859295.1| Queuosine synthesis [Ignisphaera aggregans DSM 17230]
gi|304377576|gb|ADM27415.1| Queuosine synthesis [Ignisphaera aggregans DSM 17230]
Length = 286
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 39/252 (15%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL- 63
+ K A+ + SGG DS + L R V LSFDYGQ+ EL + +KI +
Sbjct: 11 VVKPCVAVAVVSGGPDSICYMVRWLYRGCDVYALSFDYGQKGSKELRVVSDLLRKISRIA 70
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + E I+ ++ + ++ + + ++ +++ P+ VP RNI+ L A A
Sbjct: 71 VDRGWGRVVEHRIIDMSFMKNLWRGTQLTDESVDVEETYAPSVVVPIRNIVMLSIATAYA 130
Query: 124 YRLGITN------IVIG-----VCETDYS---GYPDCRHDTIRAIETAINLGMESHVTVH 169
Y L N ++ G + DYS YPDC + I AI+ A L
Sbjct: 131 YTLLEQNPSLNIYVIYGAQYNDIVPRDYSYEPRYPDCSPECIEAIQLAYRL--------- 181
Query: 170 TPLMWLKKYETWKLAQDIGGQ--------DLVNLILEESHTCYLGKRDKRYEWGYGCNSC 221
L+K E W +++ G+ DL+ ++ ++ +CYL Y C C
Sbjct: 182 CHFRMLRKIEIWSPSREGMGKPDILKMCRDLIGDLIYDTWSCYLSH-------DYHCGRC 234
Query: 222 PACYLRQKGWME 233
+C R + ++E
Sbjct: 235 ESCRNRHRAFIE 246
>gi|312128629|ref|YP_003993503.1| exsb protein [Caldicellulosiruptor hydrothermalis 108]
gi|311778648|gb|ADQ08134.1| exsB protein [Caldicellulosiruptor hydrothermalis 108]
Length = 234
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 27/225 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++ SGG DS+T L + V +SF YGQ++ ELE KK L+
Sbjct: 16 AVVVLSGGMDSTTLLYDVKSQGYEVFAISFLYGQKHSKELE----FAKKTCSLLSI---- 67
Query: 71 LGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ ++ +++ S+LT D+ + T VP RN++ L +A A L
Sbjct: 68 --PHKIVDISFFAELAPSALTTPDWDVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISL 125
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G + G D+ YPDCR + + ++ A+ L + + P + +KK + + +
Sbjct: 126 GAKKLFYGAHAGDHPIYPDCRKEFVEVMKNALYLADYIGLELEAPYVDMKKEDILRRGLE 185
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G VN L + +CY G + C C C R + +
Sbjct: 186 LG----VNYSL--TWSCYKGGQK-------ACGRCGTCTERIEAF 217
>gi|326795519|ref|YP_004313339.1| exsB protein [Marinomonas mediterranea MMB-1]
gi|326546283|gb|ADZ91503.1| exsB protein [Marinomonas mediterranea MMB-1]
Length = 219
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 37/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLC----VRKKIVELM 64
A++++SGG DS T L+ A+ V LSF+YGQR+ EL ++C + K+V +
Sbjct: 5 AVVVYSGGMDSFTVLNKAIKDGKDVYALSFNYGQRHSKELIVAAKVCQDLNIPHKVVNIS 64
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAAT 121
AI ++ SSLT + + + ++ +T VP RN++ L A
Sbjct: 65 ---------------AINELMAGSSLTDEIEIPEGHYAEESMKSTVVPNRNMVLLSMAIA 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A L + G D+ YPDCR + A+ + V + TP + K +
Sbjct: 110 YAVSLEAPEVYYGAHSGDHHIYPDCRPAFVNAMNDVSKIANYQSVEIVTPYLSNSKGDIL 169
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G L + TCY G+ C C AC R + + E
Sbjct: 170 EDGLTMG------LNYANTWTCYNGREK-------ACGKCGACTERLEAFSE 208
>gi|254445125|ref|ZP_05058601.1| exsB protein [Verrucomicrobiae bacterium DG1235]
gi|198259433|gb|EDY83741.1| exsB protein [Verrucomicrobiae bacterium DG1235]
Length = 243
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 35/242 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
SA+ ++SGG DS+ L + ++ LS +YGQ++ EL+ ++
Sbjct: 11 SAVAVYSGGMDSTVMLYRMRELGIAIKGALSVNYGQKHSKELDA-----------AAEFC 59
Query: 69 DSLGEDHILP--LAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATL 122
+LG +H + + G SSLT + ++ + +T VP RN+I L A +
Sbjct: 60 RALGIEHRVADLSGLQGIFGKSSLTSSAEEVPEGHYEEEQMKSTVVPNRNMILLSVATSW 119
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A LG + D++ YPDCR + A++ AI L S V+++ P + K + K
Sbjct: 120 AISLGAEAVAYAAHGGDHAIYPDCREEFAEALDKAIRLCDWSEVSLYRPFVTWTKADIAK 179
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKY 238
+G + LE + +CY G D+ C C C R++ + +E Y
Sbjct: 180 AGAKLG------VKLERTWSCYKGG-DRH------CGRCGTCVERREAFHLAGVEDSTAY 226
Query: 239 QD 240
+D
Sbjct: 227 ED 228
>gi|312792427|ref|YP_004025350.1| exsb protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179567|gb|ADQ39737.1| exsB protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 217
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++ SGG DS+T L + V +SF YGQ++ ELE KK +L+
Sbjct: 1 MVLSGGVDSTTLLYDVKSQGYEVFAISFLYGQKHSKELE----FAKKTCKLLSV------ 50
Query: 73 EDHILPLAILGDISHSSLTK---NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
I+ ++ +++ S+LT NV D+ + T VP RN++ L +A A LG
Sbjct: 51 PHKIVDISFFAELAPSALTTPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGA 110
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ G D+ YPDCR + + A++ A+ L + + P + +KK + + ++G
Sbjct: 111 KKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELEAPYVDMKKEDILRRGLELG 170
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
V+ L + +CY G + C C C R + +
Sbjct: 171 ----VDYSL--TWSCYKGGQK-------ACGRCGTCTERIEAF 200
>gi|312876999|ref|ZP_07736973.1| exsB protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796230|gb|EFR12585.1| exsB protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 217
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++ SGG DS+T L + V +SF YGQ++ ELE KK +L+
Sbjct: 1 MVLSGGVDSTTLLYDVKSQGYEVFAISFLYGQKHSKELE----FAKKTCKLLSV------ 50
Query: 73 EDHILPLAILGDISHSSLTK---NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
I+ ++ +++ S+LT NV D+ + T VP RN++ L +A A LG
Sbjct: 51 PHKIVDISFFAELAPSALTTPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGA 110
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ G D+ YPDCR + + A++ A+ L + + P + +KK + + ++G
Sbjct: 111 KKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELEAPYVDMKKEDILRRGLELG 170
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
V+ L + +CY G + C C C R + +
Sbjct: 171 ----VDYSL--TWSCYKGGQK-------ACGRCGTCTERIEAF 200
>gi|284048976|ref|YP_003399315.1| exsB protein [Acidaminococcus fermentans DSM 20731]
gi|283953197|gb|ADB48000.1| exsB protein [Acidaminococcus fermentans DSM 20731]
Length = 232
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 20/181 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVEL--MPK 66
AL+L SGG DS+TC+S A++ F + V T+S YGQ+++ ELEC +K+ E +P
Sbjct: 5 ALVLSSGGVDSTTCVSVAVEEFGKENVSTVSIFYGQKHRKELEC----ARKVAEYYGLPH 60
Query: 67 WKDSLGEDHILPLAILGDISHSS---LTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAAT 121
++ L + I + + HS+ + ++ +I +N +T+VP RN + L A+
Sbjct: 61 YELDLSK--IFQYSNCSLLDHSTEEIVHESYEQQIAENGEGKVSTYVPFRNGLMLSAVAS 118
Query: 122 LA---YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
LA Y +I IG D +G Y DC I A+ AI+LG + + P
Sbjct: 119 LAMSIYEKDDVSIFIGAHADDAAGNAYADCSEAFIGAMGKAISLGTYNQCHIVAPFASCS 178
Query: 177 K 177
K
Sbjct: 179 K 179
>gi|283778827|ref|YP_003369582.1| exsB protein [Pirellula staleyi DSM 6068]
gi|283437280|gb|ADB15722.1| exsB protein [Pirellula staleyi DSM 6068]
Length = 229
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK--IVELMPKWKD 69
+ +FSGG DS+ L D V LS DYGQR++ EL KK +V + K
Sbjct: 4 VAIFSGGLDSTVLAHELLAAGDEVLLLSIDYGQRHRKELVFAENFAKKQGLVWKLADLKS 63
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
G +LG S +S V + N+ T VP RN+I L A A
Sbjct: 64 IAG--------LLGGNSQTSSAVAVPHGHYAEENMKLTVVPNRNMIMLAVAGGWAVSEKA 115
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ G D++ YPDCR + +RA+ A+ L + + TP + K + + ++G
Sbjct: 116 DRLAYGAHAGDHTIYPDCRPEFVRAMAAALELCDWHKLAMFTPFVSRSKADIVRRGAELG 175
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + +CY G C C CY R++ +
Sbjct: 176 ------VDFAATWSCYEGGEIH-------CGQCGTCYERREAF 205
>gi|261403835|ref|YP_003248059.1| exsB protein [Methanocaldococcus vulcanius M7]
gi|261370828|gb|ACX73577.1| exsB protein [Methanocaldococcus vulcanius M7]
Length = 232
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR------NKVELECRLCVRKKIVELM 64
A+ + SGG DS+ A DR + ++F+YGQ+ N + C + K IV +
Sbjct: 3 AITVLSGGLDSTVATLIAKDRGYEMTAITFNYGQKAVKREINSAKKICEILGIKHIVVDL 62
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P K G+ ++ + + + L A + + +VP RN+I A+ A
Sbjct: 63 PFVK-QFGKSSLITEKEIPTLKMNELDSEKAF----DTMRAVWVPARNVIMFSIASGFAE 117
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
LG I IG+ + + +PD + + A + G + V + PL K E KL
Sbjct: 118 SLGAEKIFIGINKEEGITFPDNTIEFVEAFNRVLEYGTLNKVKIEAPLYDKTKEEIVKLG 177
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++ + V +L+ S++CY D ++ + C C +C R++ ++
Sbjct: 178 AELEKKLGVE-VLKYSYSCY---HDNGEDFLH-CGKCESCMRRKRAFL 220
>gi|124027914|ref|YP_001013234.1| PP-loop superfamily ATPase [Hyperthermus butylicus DSM 5456]
gi|123978608|gb|ABM80889.1| predicted PP-loop superfamily ATPase [Hyperthermus butylicus DSM
5456]
Length = 287
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +++K + + SGG DS+ + L R V LSF+YGQ+ ELE + +I
Sbjct: 6 VEPVVRKPCRVVAVVSGGPDSTGYMVQWLARGCMVHALSFNYGQKGSKELEVAEKLLARI 65
Query: 61 VELM---PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL- 116
E+ P W L E ++ ++ + ++ + + +K+++ P VP RN++ L
Sbjct: 66 NEMASSRPGWGRIL-EHRVVDMSFMRELWRGTQLTDETVKVEEEYQPTVVVPIRNVVMLS 124
Query: 117 ---VFAATLAYRLGITNIVI--GVCETDYSG--------YPDCRHDTIRAIETAINLGME 163
+A +LA R NI + G D + YPDC + I A++TA L
Sbjct: 125 IATAYAYSLAERYSGENIYVAYGAHYNDIAPRSDTWEPLYPDCSPECIEALQTAFRL--- 181
Query: 164 SHVTVHTPL-MWLKKYETWKLAQDIGGQ-DLVNLILEESHTCYLGKRDKRYEWGYGCNSC 221
H + +W E A+++ L+ ++ E+ +CY R + C C
Sbjct: 182 CHFRGSRRIEVWSPSREGLTKAENLKRTYQLIGNLIYETWSCYESGR-------FHCGRC 234
Query: 222 PACYLRQKGWME 233
+C R + + E
Sbjct: 235 KSCRNRHRAFKE 246
>gi|73667687|ref|YP_303702.1| succinoglycan biosynthesis regulator [Methanosarcina barkeri str.
Fusaro]
gi|110816232|sp|Q46G70|QUEC_METBF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|72394849|gb|AAZ69122.1| succinoglycan biosynthesis regulator [Methanosarcina barkeri str.
Fusaro]
Length = 231
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 39/237 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ L S G DS L+ A + FD ++FDYGQR R++ +E K +
Sbjct: 3 AITLLSSGLDSVAALAIAAEDFDIEMAITFDYGQR----------AREREIEYSRKVCEY 52
Query: 71 LGEDH-ILPLAILGDISHSSLT---------------KNVAMKIQDNNLPNTFVPGRNII 114
G +H ++ L L +I+ +SL + +I D + +VP RN +
Sbjct: 53 FGIEHRVIKLDWLSEITSTSLVNRDVEVPSLSFEDIGEAAPAEITDASAKAVWVPNRNGV 112
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
L A + A +V+G + +PD D ++A++ A ++ V + PL+
Sbjct: 113 MLNIAGSFAESRECEYLVVGFNGEEAGTFPDNSLDYVKAMDRAFFYSTQNGVKILAPLIE 172
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K E + A + LE S +CY G+ C C +C R + +
Sbjct: 173 LGKTEIVRRALEAKAP------LEYSWSCYRGEE-------IPCGECESCVRRARAF 216
>gi|150403146|ref|YP_001330440.1| exsB protein [Methanococcus maripaludis C7]
gi|167016436|sp|A6VIL3|QUEC_METM7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|150034176|gb|ABR66289.1| exsB protein [Methanococcus maripaludis C7]
Length = 233
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 28/235 (11%)
Query: 11 ALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ T L+ + +D + T++F+YGQ + L + KKI E++
Sbjct: 3 AICVLSGGLDSAVTSLAAKFENYD-ITTVTFNYGQ---MALNQEIKSAKKISEILN---- 54
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN----------TFVPGRNIIFLVFA 119
+ H++ + + + S S L + + +L + +VP RN+I A
Sbjct: 55 --ADHHVIDINFVKEFSKSGLNTGEIPEPEKEDLDDFEKSEKTMKAVWVPARNMIMFSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A +G I G+ + + +PD + I ++ G + V + PL L K E
Sbjct: 113 SGFAEGIGAEKIFSGLNKEEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYELNKPE 172
Query: 180 TWKLAQDIGGQ-DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL +++ + DL +L+ S++CY RD ++ + C +C +C R++ + E
Sbjct: 173 IAKLGKELEVKLDLE--VLKYSYSCY---RDNGEDYLH-CGTCESCMRRKRAFKE 221
>gi|312134199|ref|YP_004001537.1| exsb protein [Caldicellulosiruptor owensensis OL]
gi|311774250|gb|ADQ03737.1| exsB protein [Caldicellulosiruptor owensensis OL]
Length = 217
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++ SGG DS+T L ++ V +SF YGQ++ ELE KK L+
Sbjct: 1 MILSGGMDSTTLLYDVKNQGYEVFAISFLYGQKHSKELE----FAKKTCSLLSI------ 50
Query: 73 EDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
I+ ++ +++ S+LT D+ + T VP RN++ L +A A LG
Sbjct: 51 PHRIVDISFFAELAPSALTMPDWDVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGA 110
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ G D+ YPDCR + + A++ A+ L + + P + +KK + + ++G
Sbjct: 111 KKLFYGAHAGDHPIYPDCRKEFVEAMKKALYLADYIGLELEAPYVDMKKEDILRRGLELG 170
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
V+ L + +CY G + C C C R + +
Sbjct: 171 ----VDYSL--TWSCYKGGQK-------ACGRCGTCTERIEAF 200
>gi|119944857|ref|YP_942537.1| exsB protein [Psychromonas ingrahamii 37]
gi|189038943|sp|A1STX3|QUEC_PSYIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119863461|gb|ABM02938.1| exsB protein [Psychromonas ingrahamii 37]
Length = 221
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 30/226 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++++SGG DS T L A+ + L+FDYGQR+ E+E V +++ E L
Sbjct: 6 VVIYSGGMDSFTVLHKAMQQGLTPYALTFDYGQRHIKEIE----VAREVCE-------EL 54
Query: 72 GEDH-ILPLAILGD-ISHSSLTK---NVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
G H ++ ++ + I SSLT +VA Q ++ +T VP RN+I L A A
Sbjct: 55 GVHHKVIDISAINQLIGGSSLTDSSIDVAQGHYQQESMKSTVVPNRNMILLSLAIGYAVS 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG + G D+ YPDCR + + + V + +P + K K
Sbjct: 115 LGAEQVYYGAHSGDHEIYPDCRPIFVEKMNDVAAVANYEKVEIFSPYLNNNKSGILKDGL 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G L ++ TCY G+ C C +C R + +
Sbjct: 175 AMG------LDYSKTWTCYNGREK-------ACGKCGSCVERLEAF 207
>gi|88859839|ref|ZP_01134478.1| putative regulator protein [Pseudoalteromonas tunicata D2]
gi|88817833|gb|EAR27649.1| putative regulator protein [Pseudoalteromonas tunicata D2]
Length = 207
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 20 DSSTCLSWALDRFDRVETLSFDYGQRNKVELE-----CR-LCVRKKIVELMPKWKDSLGE 73
DS T L+ A+ V LSFDYGQR+ EL+ C+ L V KIV++
Sbjct: 2 DSFTVLNKAISEGHEVYALSFDYGQRHVKELKVAAQVCQALNVPHKIVDIS--------- 52
Query: 74 DHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
AI I SSLT ++ + Q+ ++ +T VP RN+I L A A L +
Sbjct: 53 ------AINQLIGGSSLTDDIDVPEGHYQEESMKSTIVPNRNMILLSLAVGYAVSLKASQ 106
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+ G D++ YPDCR + ++ + + V + +P + K +
Sbjct: 107 VYYGAHSGDHAIYPDCRPEFVQKMSDVCKIANYDAVEIVSPYLNNTKIDILT-------- 158
Query: 191 DLVNLILEESH--TCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
D + + L+ SH TCY G+ C C AC R + +
Sbjct: 159 DGLKMGLDYSHTWTCYNGREK-------ACGKCGACQERLEAF 194
>gi|153006833|ref|YP_001381158.1| ExsB family protein [Anaeromyxobacter sp. Fw109-5]
gi|152030406|gb|ABS28174.1| ExsB family protein [Anaeromyxobacter sp. Fw109-5]
Length = 195
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
S + L SGG DS+ + L DYGQR++ E C R +P+
Sbjct: 2 SVVPLVSGGLDSAVMSILIREEGLEQHPLFIDYGQRSR-SAELTACRRVFRAHQLPRPA- 59
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ L G + S LT +M++ D+ F+PGRN++FL+ AA AY+
Sbjct: 60 ------VAKLPGYGRLIPSGLTDK-SMRLFDD----AFLPGRNLLFLLTAAAYAYKRSAR 108
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ IG+ + Y+ +PD ++ E I+ M V P+M K + +LAQ+
Sbjct: 109 AVAIGLLDERYALFPDQTRSFVQEAEHLISNCMGVPFVVLAPMMHFSKVDVLRLAQEY-- 166
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
N++ +H+C+ G C +C AC
Sbjct: 167 ----NVV--GAHSCHAGTATP-------CGACVAC 188
>gi|242309654|ref|ZP_04808809.1| queuosine biosynthesis protein queC [Helicobacter pullorum MIT
98-5489]
gi|239523655|gb|EEQ63521.1| queuosine biosynthesis protein queC [Helicobacter pullorum MIT
98-5489]
Length = 223
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 31/230 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS ++ AL V L +YGQR + + + ++ +
Sbjct: 4 AIVLASGGLDSCVSIACALKDGYEVCLLHINYGQRTQSRED------RAFSDIADFY--G 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-------TFVPGRNIIFLVFAATLA 123
+ + I+ ++ L I SSL + +M I+++ +P+ T+VP RN + A + A
Sbjct: 56 ITQKLIVDISYLRQIGGSSLVDS-SMPIEEDTIPSAKGAIPSTYVPFRNANMISIAVSWA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
+ I IG E D SGYPDCR + + +G+ ++ V + TPL+ L K E
Sbjct: 115 EVIRAKKIYIGAVEEDSSGYPDCREIFYQKFNDLLKVGLSPKNEVEILTPLIHLSKKEIV 174
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++ L + +CY + C C +C LR +G+
Sbjct: 175 QKGIELEAP------LHLTWSCYQNENK-------ACGVCESCKLRLRGF 211
>gi|325851988|ref|ZP_08171071.1| protein ExsB [Prevotella denticola CRIS 18C-A]
gi|325484544|gb|EGC87460.1| protein ExsB [Prevotella denticola CRIS 18C-A]
Length = 218
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 38/232 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKIVELMPK 66
++++ SGG DS T L +D+ ET+ SFDYGQ + K +
Sbjct: 4 SVIIVSGGLDSITLL------YDKAETIALAVSFDYGQNHGA----------KELPFAAH 47
Query: 67 WKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
LG HI +PL+ + SSL + N+ +T VP RN I L A
Sbjct: 48 HCRKLGIPHITIPLSFMHRYFKSSLLDGAEAIPEGHYAEENMKSTVVPFRNGIMLAIATG 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A G+ + I D++ YPDCR D I+A++ A G +V + P + K +
Sbjct: 108 IAESHGLKRVYIANHGGDHTIYPDCRPDFIQAMDGAATAGTFINVRIEAPYTNITKADIV 167
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G + ++ +CY G C C C R++ ++E
Sbjct: 168 RRGTALG------VDYSKTWSCYKGSDVH-------CGKCGTCVERKEAFLE 206
>gi|289191719|ref|YP_003457660.1| exsB protein [Methanocaldococcus sp. FS406-22]
gi|288938169|gb|ADC68924.1| exsB protein [Methanocaldococcus sp. FS406-22]
Length = 232
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ A D V ++F+YGQR + + KKI E+
Sbjct: 3 AITVLSGGLDSTVATLIAKDLGYEVTAITFNYGQRAA---KREINSAKKICEI------- 52
Query: 71 LGEDHIL-PLAILGDISHSSLTKNV---AMKIQDNNLPNTF-------VPGRNIIFLVFA 119
LG +HI+ L + SSL +K+++ + F VP RN+I A
Sbjct: 53 LGIEHIVVDLPFVKQFGKSSLVTEKEIPTLKMEELDSEKAFETMKAVWVPARNVIMFGIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L I IG+ + + +PD + + A + G + V + PL K E
Sbjct: 113 SGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVLEYGTLNKVKIEAPLYDKTKEE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
KL ++ + V +L+ S++CY RD ++ + C C +C R++ ++
Sbjct: 173 IVKLGAELEKKLGVE-VLKYSYSCY---RDNGEDFLH-CGKCESCMRRKRAFL 220
>gi|197303439|ref|ZP_03168478.1| hypothetical protein RUMLAC_02161 [Ruminococcus lactaris ATCC
29176]
gi|197297437|gb|EDY31998.1| hypothetical protein RUMLAC_02161 [Ruminococcus lactaris ATCC
29176]
Length = 227
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLC------VRKKIVE 62
AL+L SGG DS+T L+ A+ R+ D V LS YGQ++ E++ V + ++
Sbjct: 3 ALVLSSGGVDSTTALALAVSRYGKDNVIALSVSYGQKHDKEIQAAKAVSAFYGVEQLFLD 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L ++ S + L +I S K + K + +T+VP RN +FL AA++
Sbjct: 63 LSKIFQYS---NCSLLQQSTEEIPEESYAKQIE-KTEGEKPVSTYVPFRNGLFLSSAASI 118
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + I+ G D +G YPDC A+ AI G + V P + + K E
Sbjct: 119 ALSKDCSVILYGAHADDSAGFAYPDCSPVFNDAMNQAIFEGSGHQLKVEAPFVNMTKAEV 178
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K+ ++ N E + +CY GK + C C C R +
Sbjct: 179 VKMGLEL------NAPYELTWSCYEGKDEP-------CGKCGTCIDRAAAF 216
>gi|288799903|ref|ZP_06405362.1| ExsB protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288333151|gb|EFC71630.1| ExsB protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 222
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 34/230 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++++ SGG DS T L D+ D + +SF+YG + K + +
Sbjct: 4 SIIIVSGGMDSITLL---YDKKDEIALGISFNYGSNH----------NNKEIPFAKMHCE 50
Query: 70 SLGEDHI-LPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
LG HI + L + SSL + A KI + +N+ +T VP RN I L A +A
Sbjct: 51 HLGIQHITIDLDFMHQYFKSSLLEG-AEKIPEGHYASDNMKSTVVPFRNGIMLSIAIGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G+ ++I D++ YPDCR+D I A+ A G ++T+ P + K + K+
Sbjct: 110 ESNGLKKVLIANHGGDHTIYPDCRNDFIEAMNLASQAGTFVNITIEAPYTHITKGDIAKI 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + ++ E+ +CY G+ + C C C R++ E
Sbjct: 170 GKKL------DINFAETWSCYKGEE-------HHCGVCGTCIERKEALQE 206
>gi|296109149|ref|YP_003616098.1| exsB protein [Methanocaldococcus infernus ME]
gi|295433963|gb|ADG13134.1| exsB protein [Methanocaldococcus infernus ME]
Length = 232
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ +A + ++++YGQR K E+E KKI E++
Sbjct: 3 AVSILSGGLDSTVATMYAKALGYDLLAITYNYGQRAAKREIEAA----KKISEILKI--- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNV---AMKIQDNNLPNTF-------VPGRNIIFLVFA 119
E ++ L + + S+L N + +D + F VP RN+IFL A
Sbjct: 56 ---EHKVVELNFVKEFGKSALITNKEIPKLTFEDLDSEKAFETMRAVWVPARNVIFLAIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A + I IG+ + + +PD + + A A+ G + V V PL K E
Sbjct: 113 SGFAEAIDGEKIFIGINKEEGVTFPDNTIEFVEAFNRALEYGTLNKVKVEAPLYDKTKEE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
KL +++ + L +L+ S++CY +D + + C C +C R++ +
Sbjct: 173 IVKLGKEL-EEKLGVKVLKYSYSCY---KDNGESFLH-CGECESCLRRKRAF 219
>gi|124486431|ref|YP_001031047.1| hypothetical protein Mlab_1618 [Methanocorpusculum labreanum Z]
gi|189038924|sp|A2STX4|QUEC_METLZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|124363972|gb|ABN07780.1| exsB protein [Methanocorpusculum labreanum Z]
Length = 222
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ L SGG DS+T A + L +YGQR + +K +E K D
Sbjct: 4 AVCLLSGGMDSTTLAFVAKKMGYDILALHVNYGQRTE----------RKELEAAKKVADV 53
Query: 71 LGEDHILPLAI--LGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAATLA 123
LG L +++ SSLT ++ ++++ L PNT+VP RN + A +
Sbjct: 54 LGVVEFLEISLDYFKKFGASSLT-DMNIEVEAGVLGRADNPNTYVPFRNGNLISIATSYC 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETW 181
I IGV D++GYPDC I A++ AI +G ++ ++ TP + + K +
Sbjct: 113 ESRDGEAIFIGVQSGDHTGYPDCTPRFIEAMQHAIYVGTQTEKSIELLTPFVMMNKTDIL 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K ++ + E + +CY E C C +C R K + +
Sbjct: 173 KEGMEL------CVPYEHTWSCY-------SENDEACGVCSSCLARLKAFADL 212
>gi|258646635|ref|ZP_05734104.1| ExsB protein [Dialister invisus DSM 15470]
gi|260404056|gb|EEW97603.1| ExsB protein [Dialister invisus DSM 15470]
Length = 233
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCLS A++ + V T S YGQ++K EL+ V +P ++
Sbjct: 4 AIILSSGGVDSTTCLSVAVNALGAENVSTASIFYGQKHKKELDAARAVAAYY--HVPHYE 61
Query: 69 DSLGEDHILPLAILGDISHSS---LTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAATLA 123
L + I+ + +SHS+ + K+ +I + +T+VP RN + + AA+LA
Sbjct: 62 FDLAQ--IMQYSNCSLLSHSTESIVHKSYGEQIAEKGAGKVSTYVPFRNGLMISVAASLA 119
Query: 124 ---YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
Y T+I +G D +G Y DC ++A+ A+ +G ++ VH + K
Sbjct: 120 AGIYEEEETDIYVGAHGDDAAGEAYADCSPQFLKAMGEAVAVG--TYGKVHLVFPFADKN 177
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+T +A+ + + E + +CY G C C C R K + E
Sbjct: 178 KTGVVAEGL----KLGTPYELTWSCYEGGDTP-------CGECGTCIDRAKAFAE 221
>gi|291550956|emb|CBL27218.1| preQ(0) biosynthesis protein QueC [Ruminococcus torques L2-14]
Length = 227
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 103/239 (43%), Gaps = 41/239 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL+LFSGG DS+T L A+ ++ D+V LS YGQ++ E+ + V
Sbjct: 3 ALVLFSGGIDSTTALGLAIKKYGKDQVIALSISYGQKHDKEIRAAIAV-----------A 51
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLP------------NTFVPGRNIIF 115
+ G +H+ L L+ + S+ SL + +I + + +T+VP RN +F
Sbjct: 52 EYYGVEHLFLDLSKIFQYSNCSLLQQSTEEIPEESYAEQISKTNGDKPVSTYVPFRNGLF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
L AA++A I G D +G YPDC +A+ AI G + + P +
Sbjct: 112 LSSAASIALSKECGVIYYGAHADDSAGFAYPDCSPVFNQAMNEAIWEGSGHQLKIEAPFV 171
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K E ++ ++G + E + +CY G C C C R +
Sbjct: 172 NVSKAEVVRIGLELG------VPYELTWSCYEGGEKP-------CGKCGTCIDRAAAFQ 217
>gi|256810146|ref|YP_003127515.1| exsB protein [Methanocaldococcus fervens AG86]
gi|256793346|gb|ACV24015.1| exsB protein [Methanocaldococcus fervens AG86]
Length = 232
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ A + + ++F+YGQ+ ++ + KKI E+
Sbjct: 3 AVTVLSGGLDSTVSTLIAKNLGYEITAITFNYGQK---AVKREINASKKICEI------- 52
Query: 71 LGEDHIL-PLAILGDISHSSL-TKNV--AMKIQD-------NNLPNTFVPGRNIIFLVFA 119
L +HI+ L + SSL T+N ++KI+D + +VP RN+I L A
Sbjct: 53 LDINHIVVDLPFIKQFKKSSLITENEIPSLKIEDLDSEKAHETMKTVWVPARNLIMLSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L + IG+ + + +PD + + A+ A+ G + V + PL K E
Sbjct: 113 SGFAEALDAEKVFIGINKEEGLTFPDNTIEFVDALNKALEYGTLNKVKIEAPLYDKTKEE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K+ ++I + L +L+ S++CY +D ++ + C C +C R++ ++
Sbjct: 173 IVKIGREI-EKKLGLEVLKYSYSCY---KDNGEDFLH-CGECESCMRRKRAFL 220
>gi|159905116|ref|YP_001548778.1| exsB protein [Methanococcus maripaludis C6]
gi|254764359|sp|A9A873|QUEC_METM6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|159886609|gb|ABX01546.1| exsB protein [Methanococcus maripaludis C6]
Length = 233
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 28/235 (11%)
Query: 11 ALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ T L + +D + T++F+YGQ + L + KKI E++
Sbjct: 3 AICVLSGGLDSAVTSLVAKSENYD-ITTVTFNYGQ---MALNQEIKSAKKISEILN---- 54
Query: 70 SLGEDHILPLAILGDISHSSL-TKNVA---------MKIQDNNLPNTFVPGRNIIFLVFA 119
++H++ + + S S L T N+ + + + +VP RN+I A
Sbjct: 55 --ADNHVIDINFVKKFSKSGLNTGNIPEPEKEDLDDFEKSEKTMKAVWVPARNMIMFSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A + I G+ + + +PD + I ++ G + V + PL L K E
Sbjct: 113 SGFAEGIDAEKIFSGLNKEEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYKLNKPE 172
Query: 180 TWKLAQDIGGQ-DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL +++ + DL +++ S++CY RD R ++ + C +C +C R++ + E
Sbjct: 173 IAKLGKELELKLDLE--VIKYSYSCY---RDNREDYLH-CGTCESCMRRKRAFKE 221
>gi|45357789|ref|NP_987346.1| ExsB family transcriptional regulator [Methanococcus maripaludis
S2]
gi|74555941|sp|Q6M0P3|QUEC_METMP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|45047349|emb|CAF29782.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 233
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 110/234 (47%), Gaps = 26/234 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ +A + + T++F+YGQ + L + KKI +++
Sbjct: 3 AICVLSGGLDSAVTSMFAKSKNYDISTVTFNYGQ---MALNQEIKSAKKISDILN----- 54
Query: 71 LGEDHILPLAILGDISHSSL-TKNVA---------MKIQDNNLPNTFVPGRNIIFLVFAA 120
+ H++ + + + S S L T N+ + + + +VP RN+I A+
Sbjct: 55 -ADHHVIDINFVKEFSKSGLNTGNIPEPENEDLDDFEKSEKTMKAVWVPARNMIMFSIAS 113
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A +G I G+ + + +PD + I ++ G + V + PL L K E
Sbjct: 114 GFAEGIGAEKIFSGLNKEEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYELNKPEI 173
Query: 181 WKLAQDIGGQ-DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL +++ + DL +L+ S++CY +D ++ + C +C +C R++ + E
Sbjct: 174 AKLGKELELKLDLE--VLKYSYSCY---KDNGKDYLH-CGTCESCMRRKRAFKE 221
>gi|282859128|ref|ZP_06268255.1| protein ExsB [Prevotella bivia JCVIHMP010]
gi|282588083|gb|EFB93261.1| protein ExsB [Prevotella bivia JCVIHMP010]
Length = 217
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVELMPKW 67
++++ SGG DS T L D +SFDYGQ +N++ L C
Sbjct: 4 SVIIVSGGLDSVTLLYEKADEI--ALAISFDYGQNHSKNELPLAAYHC------------ 49
Query: 68 KDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATL 122
+ LG HI +PL + + SSL ++NN+ +T VP RN I L A +
Sbjct: 50 -EKLGIRHIVIPLKFINEYFKSSLLDGGEAIPEGHYEENNMKSTVVPFRNGIMLSIATGI 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + ++I D++ YPDCR I+A+ A G +V V P + K E
Sbjct: 109 AESHALKRVMIANHGGDHTIYPDCRPAFIQAMNGATATGTYINVQVEAPYTNITKAEIVH 168
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++ +CY G C C C R++ +
Sbjct: 169 RGAALG------IDYSKTWSCYKGGEKH-------CGKCGTCVERKEAF 204
>gi|307943820|ref|ZP_07659164.1| queuosine biosynthesis protein QueC [Roseibium sp. TrichSKD4]
gi|307773450|gb|EFO32667.1| queuosine biosynthesis protein QueC [Roseibium sp. TrichSKD4]
Length = 229
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
L++ SGG DS T L+ + R ++ + LSFDYGQR++ EL+C + D
Sbjct: 4 LVVCSGGMDSVT-LAHKVQRENQLIALLSFDYGQRHRKELDC-----------AKQCADD 51
Query: 71 LGEDHILP--LAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG +HIL I +S S+LT ++ + ++ + T VP RN I L A +A
Sbjct: 52 LGVEHILIDISGIGAKLSGSALTDDIDVPDGHYAEDTMKITVVPNRNAIMLTIAFGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR + A ET +E + + ++TP + L K +
Sbjct: 112 RGANAVAAAVHGGDHFIYPDCRPGFVEAFETMQRHALEGMNDIRLYTPFVHLSKGDIAAE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G + S +CY G+ C C C R++ +
Sbjct: 172 SARLG------VDHRTSWSCYKGEN-------LHCGRCGTCVERREAF 206
>gi|229496734|ref|ZP_04390445.1| ExsB protein [Porphyromonas endodontalis ATCC 35406]
gi|229316280|gb|EEN82202.1| ExsB protein [Porphyromonas endodontalis ATCC 35406]
Length = 225
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 95/231 (41%), Gaps = 34/231 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQR-NKVELECRLCVRKKIVELMP 65
A L++ SGG DS+T L D D + ++FDYG + N+ E+ C
Sbjct: 9 ARDGLIVLSGGLDSTTLL---YDYRDEIALAVTFDYGSKHNQREIPC-----------AQ 54
Query: 66 KWKDSLGEDH-ILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAA 120
LG +H I+PL +G S L + + N+ T VP RN I L AA
Sbjct: 55 HHCRQLGIEHLIIPLGFMGQYFRSDLLLSGGEIPLGAYNEENMQATVVPFRNGIMLSIAA 114
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA G+ + I D++ YPDCR + AI G + V + P L K E
Sbjct: 115 GLAESRGLKRLFIANHFGDHNIYPDCRATFAEPMAEAILQGTSNSVELAAPYTHLSKSEI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G L + +CY+G + C C C R++ +
Sbjct: 175 VAVGMPLG------LDYATTWSCYVGGETQ-------CGECATCRERKEAF 212
>gi|325291197|ref|YP_004267378.1| exsB protein [Syntrophobotulus glycolicus DSM 8271]
gi|324966598|gb|ADY57377.1| exsB protein [Syntrophobotulus glycolicus DSM 8271]
Length = 231
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 30/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELEC------RLCV 56
++K A++L SGG DS+ C A F + V L+ YGQ++ E++ L +
Sbjct: 1 MEKKRKAVVLLSGGLDSTICAVLACREFGAENVIALTLFYGQKHAREIKSAEAVCEHLGI 60
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+ E +P G + P ++++ L+ Q + T+VP RN FL
Sbjct: 61 PEHYTESLPDIFRGAGSTLVDPDKPNPEMTYEELS-------QAYGISPTYVPFRNANFL 113
Query: 117 VFAATLAYRLGITNIVIGVCETDYS--GYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A T+A I G D YPDC + ++ +AI +G V + TPL W
Sbjct: 114 SVATTVALVKEADTIFYGAHAEDARNWAYPDCTPEFNGSMASAIYIGSYLKVRLVTPLQW 173
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K + L VN E + +CY G+ C C C R + + E
Sbjct: 174 LTKKDIVALGIT------VNAPFELTWSCYNGQEK-------ACGVCSTCVGRLQAFQE 219
>gi|303257911|ref|ZP_07343920.1| ExsB protein [Burkholderiales bacterium 1_1_47]
gi|302859254|gb|EFL82336.1| ExsB protein [Burkholderiales bacterium 1_1_47]
Length = 231
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 101/240 (42%), Gaps = 43/240 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A+ + V TLSF+YGQR+ ELE K
Sbjct: 3 AIVLSSGGVDSTTCLAMAVHELGKENVVTLSFEYGQRHSKELEG-----------AQKVA 51
Query: 69 DSLGEDHIL----------PLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFL 116
D G H++ ++L + + + ++ A +I N +T+VP RN + L
Sbjct: 52 DFYGVKHVVFNLTQIFSFSNCSLLSNSTEKPVHESYADQIAKNGEGKVSTYVPFRNGLML 111
Query: 117 VFAATLAYRL---GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTP 171
A LA L I IG D +G Y DC A+ AIN+G V++ P
Sbjct: 112 SAGAALAQSLFPEEKCEIWIGAHADDAAGNAYADCSVGFNNAMNEAINIGTYGLVSLRAP 171
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L W AQ + + + E + +CY G C C C R+ +
Sbjct: 172 L------NRWNKAQVVAKGLELKVPYELTWSCYDGGEK-------ACGECGTCIDRKAAF 218
>gi|150399982|ref|YP_001323749.1| exsB protein [Methanococcus vannielii SB]
gi|167016438|sp|A6URL5|QUEC_METVS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|150012685|gb|ABR55137.1| exsB protein [Methanococcus vannielii SB]
Length = 233
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS A + T++F+YGQ + L+ L KKI +++
Sbjct: 3 AISVLSGGLDSLVTSMVAKKENSEIATVTFNYGQ---MALDKELKSAKKISKVLG----- 54
Query: 71 LGEDHILPLAILGDISHSSL-TKNVA---------MKIQDNNLPNTFVPGRNIIFLVFAA 120
E+ + ++ + + S S L T N+ K + + + +VP RN+I A+
Sbjct: 55 -AENQVFDISFVKEFSKSGLNTGNIPNPKKDDLDDFKESEKTMKSVWVPARNMIMFSIAS 113
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + I G+ + + +PD + I + ++ G + V ++ PL L K E
Sbjct: 114 GFAEGINAEKIYSGLNKEEGVTFPDNSTEFINSFNKSLEYGTLNKVKMYAPLYNLDKVEI 173
Query: 181 WKLAQDIGGQDLVNL-ILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + +D + L IL+ S++CY RD ++ + C +C +C R++ +
Sbjct: 174 ATFGKRL--EDELGLDILKYSYSCY---RDNLKDYLH-CGTCESCMRRKRAF 219
>gi|317505473|ref|ZP_07963391.1| transcription regulator ExsB [Prevotella salivae DSM 15606]
gi|315663386|gb|EFV03135.1| transcription regulator ExsB [Prevotella salivae DSM 15606]
Length = 217
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 97/235 (41%), Gaps = 44/235 (18%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKV------ELECRLCVRKKIVEL 63
++++ SGG DS T L D+ D + +SFDYG + E+ C+
Sbjct: 4 SVIIVSGGMDSITLL---YDKKDEIALGISFDYGSNHNAKEIPFAEMHCK---------- 50
Query: 64 MPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVF 118
LG HI + L + SSL + D N+ +T VP RN I L
Sbjct: 51 ------RLGIKHITINLDFMHQYFKSSLLQGAEAIPEGHYADENMKSTVVPFRNGIMLSI 104
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A +A + ++I D++ YPDCR I+AI+ A N G +V V P + K
Sbjct: 105 AIGIAESNQLKKVLIANHGGDHTIYPDCRPQFIQAIDAAANAGTFVNVRVEAPYTNITKG 164
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ ++ + +G L E+ +CY G C C C R++ E
Sbjct: 165 DIARIGKRLG------LDYTETWSCYKGGEKH-------CGKCGTCIERKEALQE 206
>gi|251771686|gb|EES52261.1| exsB protein [Leptospirillum ferrodiazotrophum]
Length = 229
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
++L SGG DS+ + A D + L YG R + E + L ++
Sbjct: 7 GVVLVSGGMDSAVTAALARKECDFLGFLHVRYGGRTQRREE------QSFRALCDHFRPD 60
Query: 71 LGEDHILPLAILGDISHSSLTK-NVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I L + S+LT N+ + ++ +P T+VP RN FL A + A L
Sbjct: 61 --RTLITDAPSLAAVGGSALTDGNLEIPEGDLERTGIPVTYVPFRNAHFLSVAVSWAEVL 118
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--ME---SHVTVHTPLMWLKKYETW 181
I IG E D SGYPDCR A E A LG ME S +++ TP++ + K E
Sbjct: 119 SCDRIYIGAVEEDSSGYPDCRRSFYDAFEQAARLGTAMEMEGSSLSIVTPVIHMDKGEIV 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + ++ + +CY E C C +C LR +G+
Sbjct: 179 RTGLSL------SVPFALTWSCY-------REGEKACGHCDSCLLRLRGF 215
>gi|99081887|ref|YP_614041.1| ExsB [Ruegeria sp. TM1040]
gi|118574293|sp|Q1GEY7|QUEC_SILST RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|99038167|gb|ABF64779.1| ExsB [Ruegeria sp. TM1040]
Length = 233
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS + ++ +SFDYGQR++ EL+ R L +
Sbjct: 4 LVICSGGLDSVSLAHITSQKYQLTRLVSFDYGQRHRKELDF---ARAAATRLGVPF---- 56
Query: 72 GEDHILPL-AILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + +I G +S S+LT ++ + ++ + T VP RN I L +A G
Sbjct: 57 ---HLIDMRSIGGALSGSALTDDIDVPDGHYAEDTMRITVVPNRNAIMLAIGFGVAAAQG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR RA ET ++ + V +HTP + K + +
Sbjct: 114 DEAVATAVHGGDHFIYPDCRPGFTRAFETMQRAALDGYADVRLHTPFVEQSKADIVRAGA 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
N E+ +CY G C C C R++ +
Sbjct: 174 ------AHNTPFAETWSCYKGGD-------IHCGRCGTCVERREAF 206
>gi|282878837|ref|ZP_06287604.1| protein ExsB [Prevotella buccalis ATCC 35310]
gi|281299045|gb|EFA91447.1| protein ExsB [Prevotella buccalis ATCC 35310]
Length = 228
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 30/229 (13%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K +L++ SGG DS T L R +SFDYG + +K + L
Sbjct: 10 KMEKDSLIIVSGGMDSITMLYEYQQRI--AIGVSFDYGSNHN----------QKEIPLAK 57
Query: 66 KWKDSLGEDHI-LPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
D LG HI +PL+ + D SSL + ++ N+ +T VP RN I L
Sbjct: 58 MHCDRLGIRHIVIPLSFMHDYFKSSLLEGDDAIPEGHYEEENMKSTVVPFRNGIMLAVGC 117
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA + ++I D++ YPDCR + I + A+ G +T+ P + K E
Sbjct: 118 GLAVSNHLKYVMIANHGGDHTIYPDCRPEFIDSFSQAMAAGTFEGITILAPYTQISKGEI 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ +G + E+ +CY G DK+ C C C R++
Sbjct: 178 ALRGKKLG------INYAETWSCYKGG-DKQ------CGKCGTCVERKE 213
>gi|55378863|ref|YP_136713.1| succinoglycan biosynthesis ExsB protein [Haloarcula marismortui
ATCC 43049]
gi|74517585|sp|Q5V0E6|QUEC_HALMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|55231588|gb|AAV47007.1| succinoglycan biosynthesis ExsB protein [Haloarcula marismortui
ATCC 43049]
Length = 232
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T A R +D + L YGQ + E EC + +
Sbjct: 7 AVVLASGGMDSATAAYEAQTRGYDHLYLLHTSYGQNTEDREYECASALADHV-------- 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
D+ H+ L I SSLT + +M++ D + +P ++VP RN L A + A
Sbjct: 59 DAADFLHV-ETGHLTQIGASSLTDD-SMEVADADTDSDEIPTSYVPFRNANLLSMAVSYA 116
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
+ IG D+SGYPDCR A + I+ G ++ + + P + K +
Sbjct: 117 EANDCGAVFIGAHSEDFSGYPDCRPAFFDAFQGVIDAGTKPDTDIALVAPFVEWSKTDIA 176
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++G + ++ +CY RD C +C AC R + + E+
Sbjct: 177 ERGVELG------VPYADTWSCY---RDDE----PACGTCDACAFRLEAFQRIGER 219
>gi|331000424|ref|ZP_08324099.1| protein ExsB [Parasutterella excrementihominis YIT 11859]
gi|329571756|gb|EGG53436.1| protein ExsB [Parasutterella excrementihominis YIT 11859]
Length = 231
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 101/240 (42%), Gaps = 43/240 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A+ + V TLSF+YGQR+ ELE K
Sbjct: 3 AIVLSSGGVDSTTCLAMAVHELGKENVVTLSFEYGQRHCKELES-----------AQKVA 51
Query: 69 DSLGEDHIL----------PLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFL 116
D G H++ ++L + + ++ A +I N +T+VP RN + L
Sbjct: 52 DYYGVRHVVFNLTQIFSFSNCSLLSTSTEKPVHESYAEQISKNGEGKVSTYVPFRNGLML 111
Query: 117 VFAATLAYRL---GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTP 171
A LA L I IG D +G Y DC A++ AIN+G V++ P
Sbjct: 112 SAGAALAQSLFPEEKCEIWIGAHADDAAGNAYADCSVGFNNAMDQAINIGTYGLVSLRAP 171
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L W AQ + + + E + +CY G C C C R+ +
Sbjct: 172 L------NRWNKAQVVAKGLELKVPYELTWSCYDGGEK-------ACGECGTCIDRKAAF 218
>gi|182412683|ref|YP_001817749.1| exsB protein [Opitutus terrae PB90-1]
gi|177839897|gb|ACB74149.1| exsB protein [Opitutus terrae PB90-1]
Length = 220
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 20 DSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH-ILP 78
DS T L WA +SFDYG ++ K + + LG H ++
Sbjct: 2 DSVTALYWAAREHHVSAVVSFDYGSKHN----------PKELPFAAEHAARLGARHEVIH 51
Query: 79 LAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
L + + S+L + + N+ T VP RN I L A LA +G +VI
Sbjct: 52 LDFVNRLFASALLQRGGAIPDGHYEAENMKQTVVPFRNAILLSIACGLAESVGAEGLVIA 111
Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
D++ YPDCR + +RA+ A+ LG + + + P + K + +G
Sbjct: 112 AHGGDHAIYPDCREEFMRAMGEAMALGTYAGIRLLRPFIAKNKAQIAAEGARLG------ 165
Query: 195 LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + +CY G C +C C R++ + E
Sbjct: 166 VDFARTWSCYKGGPVH-------CGTCGTCVERREAFAE 197
>gi|238921902|ref|YP_002935416.1| queuosine biosynthesis protein QueC [Eubacterium eligens ATCC
27750]
gi|238873574|gb|ACR73282.1| queuosine biosynthesis protein QueC [Eubacterium eligens ATCC
27750]
Length = 227
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 41/238 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI-VELMPKW 67
AL+L SGG DS+T L+ A+ R+ D V LS YGQ++ E++ V VE +
Sbjct: 3 ALVLSSGGVDSTTALALAVSRYGKDNVIALSVSYGQKHDKEIQAAKAVSAFYGVEQL--- 59
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------------NTFVPGRNIIF 115
L L+ + S+ SL + +I + + +T+VP RN +F
Sbjct: 60 --------FLDLSKIFQYSNCSLLQQSTEEIPEESYARQIEKTEGEKPVSTYVPFRNGLF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
L AA++A + I+ G D +G YPDC A+ AI G + V P +
Sbjct: 112 LSSAASIALSKDCSVILYGAHADDSAGFAYPDCSPMFNDAMNQAIFEGSGHQLKVEAPFV 171
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ K E K+ ++ N E + +CY GK C C C R +
Sbjct: 172 NMTKAEVVKMGLEL------NAPYELTWSCYEGKD-------VPCGKCGTCIDRAAAF 216
>gi|237751000|ref|ZP_04581480.1| queuosine biosynthesis protein queC [Helicobacter bilis ATCC 43879]
gi|229373445|gb|EEO23836.1| queuosine biosynthesis protein queC [Helicobacter bilis ATCC 43879]
Length = 213
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKDS 70
L+LFSGG DS+T L W+ + L F Y NK E++ + + KD
Sbjct: 3 LVLFSGGVDSTTALFWS-KKECATHALIFKYPSLHNKREIDAAVQI----------CKDE 51
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKI-QDN----NLPNTFVPGRNIIFLVFAATLAYR 125
+L ++ + S+L +N + I QD+ ++ VP RN IFL AA LA
Sbjct: 52 NVSYTLLDMSSVFVGFRSALLQNSSESIPQDSYNLESMAKLVVPFRNGIFLSVAAGLAES 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG IV+ D+ YPDC I ++ +I G V + +P K E KL
Sbjct: 112 LGYKEIVLANHAGDHPLYPDCTQSFIDSMNESIMQGSGGAVKLCSPFCNWDKKEIVKLGL 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + ++++CY G CN+CP C + ++
Sbjct: 172 SLG------VDYTKTYSCYRGGEKH-------CNTCPTCIESNESFL 205
>gi|194333515|ref|YP_002015375.1| exsB protein [Prosthecochloris aestuarii DSM 271]
gi|254764366|sp|B4S6H3|QUEC_PROA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194311333|gb|ACF45728.1| exsB protein [Prosthecochloris aestuarii DSM 271]
Length = 226
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 98/230 (42%), Gaps = 33/230 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS + A + + +YGQR L + I D
Sbjct: 3 AVVLLSGGMDSLVATAEADALGYELAAMHVNYGQRT---WHKELMAFRAIC-------DH 52
Query: 71 LGEDHILPLAI--LGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAATLA 123
G H L + L I SSLT + ++ +++ +L P ++VP RN FL A +
Sbjct: 53 YGIRHRLEVDADYLSAIGGSSLT-DPSIPVEEADLHGATIPTSYVPFRNASFLSMAVAWS 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
+G I IG E D SGYPDCR A I LG E+ + + TPL+ L+K
Sbjct: 112 EVIGAEKIYIGAVEEDSSGYPDCRKVFYDAFNRVIELGTRPETAIGIETPLIELQKSAIV 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + I Q L S +CY + G C C +C R + +
Sbjct: 172 R--RGIALQVPFRL----SWSCYKSE-------GKACGHCDSCARRLRAF 208
>gi|78044764|ref|YP_359799.1| exsB protein [Carboxydothermus hydrogenoformans Z-2901]
gi|110816220|sp|Q3ADI5|QUEC_CARHZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|77996879|gb|ABB15778.1| exsB protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 215
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 37/231 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLC----VRKKIVEL 63
A++L S G DS+ L++ + F V L+F+YGQ R ++E ++ + ++++EL
Sbjct: 4 AIVLLSAGLDSTVSLAYGVRNFQVVLGLTFNYGQKASRKEIEHSKKILDYYGIPQEVIEL 63
Query: 64 --MPK-WKDSL-GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ K K SL ED +P I D+ ++ K K+ +VP RN +F+ A
Sbjct: 64 PFLKKITKTSLVAEDQEIPTGI--DLESAAAVKTSMEKV--------WVPNRNGLFINIA 113
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A LG I+ G + + D + + A+ A+ +HV V + L+K E
Sbjct: 114 AAYAESLGAKYIITGFNAEEAKTFSDNSREFVDAVNHALKYSTLNHVQVVSFTQNLEKSE 173
Query: 180 TWKLAQDIGGQ-DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
++L ++G DL+ +CY G + C C +C LR K
Sbjct: 174 IYRLGVELGAPLDLI-------WSCYYGGDEM-------CGVCESC-LRLK 209
>gi|254469725|ref|ZP_05083130.1| exsB protein [Pseudovibrio sp. JE062]
gi|211961560|gb|EEA96755.1| exsB protein [Pseudovibrio sp. JE062]
Length = 232
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++ SGG DS T + + +SFDYGQR+K EL+ K++ +P
Sbjct: 4 IVISSGGLDSVTLAYKVAREHELLGLVSFDYGQRHKKELDYAAHAAKQLG--VPH----- 56
Query: 72 GEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
HIL ++ +G +S S+LT +V + + N+ T VP RN I L +A
Sbjct: 57 ---HILDMSQIGAHLSGSALTDDVDVPDGHYAEENMKVTVVPNRNAIMLSIGFGIAAAQQ 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR I++ E+ L ++ ++V+++TP + + K
Sbjct: 114 ADAVAAAVHGGDHFIYPDCRPGFIKSFESMQKLALDGYANVSLYTPFVEISK------GA 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +N+ E++ +CY G C C C R++ +
Sbjct: 168 IVAEGARINVPFEDTWSCYKGGEKH-------CGRCGTCVERREAF 206
>gi|299142692|ref|ZP_07035822.1| ExsB protein [Prevotella oris C735]
gi|298575907|gb|EFI47783.1| ExsB protein [Prevotella oris C735]
Length = 217
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 44/235 (18%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKV------ELECRLCVRKKIVEL 63
++++ SGG DS T L D+ D + +SFDYG + E+ CR
Sbjct: 4 SVIIVSGGMDSITLL---YDKKDEIALGISFDYGSNHNAKEIPFAEMHCR---------- 50
Query: 64 MPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVF 118
LG HI + L + SSL + D+N+ +T VP RN I L
Sbjct: 51 ------RLGIKHITINLDFMHRYFKSSLLEGAEAIPEGHYADDNMKSTVVPFRNGIMLSI 104
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A +A + ++I D++ YPDCR + I+AI+ A G + V P + K
Sbjct: 105 AIGIAESNNLKKVLIANHGGDHTIYPDCRPEFIKAIDAAAYAGTFVNTHVEAPYTNITKG 164
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ ++ + +G L E+ +CY G DK C C C R++ E
Sbjct: 165 DIARIGKKLG------LDYTETWSCYKGG-DKH------CGKCGTCIERKEALAE 206
>gi|281425182|ref|ZP_06256095.1| ExsB protein [Prevotella oris F0302]
gi|281400648|gb|EFB31479.1| ExsB protein [Prevotella oris F0302]
Length = 217
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 44/235 (18%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKV------ELECRLCVRKKIVEL 63
++++ SGG DS T L D+ D + +SFDYG + E+ CR
Sbjct: 4 SVIIVSGGMDSITLL---YDKKDEIALGISFDYGSNHNAKEIPFAEMHCR---------- 50
Query: 64 MPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVF 118
LG HI + L + SSL + D N+ +T VP RN I L
Sbjct: 51 ------RLGIKHITINLDFMHRYFKSSLLEGAEAIPEGHYADENMKSTVVPFRNGIMLSI 104
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A +A + ++I D++ YPDCR + I+AI+ A G + V P + K
Sbjct: 105 AIGIAESNNLKKVLIANHGGDHTIYPDCRPEFIKAIDAAAYAGTFVNAHVEAPYTNITKG 164
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ ++ + +G L E+ +CY G DK C C C R++ E
Sbjct: 165 DIARIGKQLG------LDYTETWSCYKGG-DKH------CGKCGTCVERKEALAE 206
>gi|325270155|ref|ZP_08136762.1| transcription regulator ExsB [Prevotella multiformis DSM 16608]
gi|324987456|gb|EGC19432.1| transcription regulator ExsB [Prevotella multiformis DSM 16608]
Length = 218
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 38/232 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++++ SGG DS T L +D+ E +SFDYGQ + + +
Sbjct: 4 SVIIVSGGLDSVTLL------YDKAEEIALAISFDYGQNHGA----------RELPFAEY 47
Query: 67 WKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
LG HI +PL+ + SSL + N+ +T VP RN I L A
Sbjct: 48 HCTKLGIPHITIPLSFMHRYFKSSLLDGAEAIPEGHYAEENMKSTVVPFRNGIMLAIATG 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A G+ + I D++ YPDCR D IRA++ A G +V + P + K +
Sbjct: 108 IAESHGLKRVYIANHGGDHTIYPDCRPDFIRAMDGAATAGTFVNVRIEAPYTNITKADIV 167
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +++ ++ +CY G C C C R++ + E
Sbjct: 168 RRGT------ALDIDYSKTWSCYKGAD-------LHCGKCGTCVERKEAFQE 206
>gi|323345225|ref|ZP_08085448.1| transcription regulator ExsB [Prevotella oralis ATCC 33269]
gi|323093339|gb|EFZ35917.1| transcription regulator ExsB [Prevotella oralis ATCC 33269]
Length = 218
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 98/235 (41%), Gaps = 44/235 (18%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE------LEC-RLCVRKKIVEL 63
++++ SGG DS T L DR +SFDYG + + L C RL +R +++L
Sbjct: 4 SVIIVSGGMDSVTMLYEYQDRI--ALGISFDYGSNHNAKEIPYARLHCKRLGIRHIVIDL 61
Query: 64 ---MPKWKDSL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+K SL G D I P + N+ +T VP RN I L
Sbjct: 62 GFVHQYFKSSLLEGADAI-PEG----------------SYNEGNMKSTVVPFRNGIMLSI 104
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A +A + +++ D++ YPDCR D + A+ TA G V V P + K
Sbjct: 105 AVGVAESHHLKYVMMANHGGDHAIYPDCRPDFVAAMSTAATAGTYEKVCVLAPYTGITKT 164
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + Q G VN E+ +CY G DK C C C R++ E
Sbjct: 165 DIARRGQKFG----VN--FAETWSCYKGG-DKH------CGHCGTCRERKEALAE 206
>gi|304315237|ref|YP_003850384.1| transcriptional regulator [Methanothermobacter marburgensis str.
Marburg]
gi|302588696|gb|ADL59071.1| predicted transcriptional regulator [Methanothermobacter
marburgensis str. Marburg]
Length = 223
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+ + S G DS+ + ++ + L+FDYGQR+ +E +E K
Sbjct: 3 SAISILSAGMDSAVATALLASEYE-IHALTFDYGQRSAA-ME---------IEHARKLAK 51
Query: 70 SLGEDHI-LPLAILGDISHSSLTKNVAMKIQDN---------NLPNTFVPGRNIIFLVFA 119
LG +H + L LG + S+LT + + +VPGRNI+F
Sbjct: 52 HLGIEHTTIELPWLGRLGGSALTAGGEIPSPADLDDREECLETARRVWVPGRNIVFTAIG 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L +++G + +PD + + A + +G V V PL+ + K E
Sbjct: 112 VSFAEALDADAVIVGWDLEEAETFPDNSAEFLDAFNRLLGIGTLRGVEVRAPLIGMTKRE 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++ +G L E +++CY G C C +C R++ +
Sbjct: 172 IVEVGSAVG------LPFELTYSCYSGGE-------VHCGVCESCMRRRRAF 210
>gi|15669538|ref|NP_248349.1| ExsB [Methanocaldococcus jannaschii DSM 2661]
gi|1591989|gb|AAB99356.1| ExsB [Methanocaldococcus jannaschii DSM 2661]
Length = 235
Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ A D V ++F+YGQR + + KKI E+
Sbjct: 6 AITVLSGGLDSTVVTLIAKDLGYEVTAITFNYGQRAA---KREINSAKKICEI------- 55
Query: 71 LGEDHIL-PLAILGDISHSSLTKNV---AMKIQD-------NNLPNTFVPGRNIIFLVFA 119
LG +HI+ L + SSL +K+++ + +VP RN+I A
Sbjct: 56 LGIEHIVVDLPFVKQFGKSSLITEKEIPTLKMEELDSEKAYETMKAVWVPARNVIMFGIA 115
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L I IG+ + + +PD + + A + G + V + PL K E
Sbjct: 116 SGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVLEYGTLNKVKIEAPLYDKTKEE 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
KL ++ + V +L+ S++CY D ++ + C C +C R++ ++
Sbjct: 176 IVKLGAELEKKLGVE-VLKYSYSCY---HDNGEDFLH-CGKCESCMRRKRAFL 223
>gi|323141811|ref|ZP_08076677.1| protein ExsB [Phascolarctobacterium sp. YIT 12067]
gi|322413703|gb|EFY04556.1| protein ExsB [Phascolarctobacterium sp. YIT 12067]
Length = 245
Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 39/235 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---------RKKIV 61
L+L SGG DSSTCL+ A +++ D V LS YGQ++ EL + +
Sbjct: 23 LVLLSGGVDSSTCLALAKEKYGDNVLALSMSYGQKHAKELAAAQAIADYYHVELLHMDLS 82
Query: 62 ELMPKWKDSL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
++ K SL G + +P H+S + +K +T+VP RN +FL A
Sbjct: 83 KIFAHSKCSLLQGSEESVP--------HASYAEQ--LKESKGEPVSTYVPFRNGLFLSAA 132
Query: 120 ATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A++A I G D +G YPDC + ++ A+ LG V + P +
Sbjct: 133 ASIALEYECNEIYYGPHADDAAGNAYPDCSVEFNESMNLAVYLGSGRKVRLVAPFV---- 188
Query: 178 YETWKLAQDIGGQDL-VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K +DI + L + + E + +CY G C+ C C R+ +
Sbjct: 189 ---DKTKKDIVAEGLRLGVPYELTWSCYDGDEKP-------CHKCGTCIDREAAF 233
>gi|110825739|sp|Q58742|QUEC_METJA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
Length = 232
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 26/233 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ A D V ++F+YGQR + + KKI E+
Sbjct: 3 AITVLSGGLDSTVVTLIAKDLGYEVTAITFNYGQRAA---KREINSAKKICEI------- 52
Query: 71 LGEDHIL-PLAILGDISHSSLTKNV---AMKIQD-------NNLPNTFVPGRNIIFLVFA 119
LG +HI+ L + SSL +K+++ + +VP RN+I A
Sbjct: 53 LGIEHIVVDLPFVKQFGKSSLITEKEIPTLKMEELDSEKAYETMKAVWVPARNVIMFGIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L I IG+ + + +PD + + A + G + V + PL K E
Sbjct: 113 SGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVLEYGTLNKVKIEAPLYDKTKEE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
KL ++ + V +L+ S++CY D ++ + C C +C R++ ++
Sbjct: 173 IVKLGAELEKKLGVE-VLKYSYSCY---HDNGEDFLH-CGKCESCMRRKRAFL 220
>gi|307594719|ref|YP_003901036.1| exsB protein [Vulcanisaeta distributa DSM 14429]
gi|307549920|gb|ADN49985.1| exsB protein [Vulcanisaeta distributa DSM 14429]
Length = 496
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM--PKWKD 69
L++ SGG DS+T ++ L + V L F+YG R + + + + ++I E + P +
Sbjct: 256 LVIASGGLDSTTAATYLLKQGYDVALLHFNYGHRAETQEDRAI---RRIAEFLGVPLLEV 312
Query: 70 SLGEDHIL---PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
S+ ++ PL G+I+ + A + +VP RN +F+ A +A
Sbjct: 313 SMDFFKVVRHSPLLGDGEINRVDEGREGA------EFAHEWVPARNFVFIALATAIAEAY 366
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLA 184
G I G+ + YPD + IR + + +G HV + P+ L K+E KL
Sbjct: 367 GYDYIATGINLEEAGAYPDNEMEFIRLLNKVMPYAVGPNKHVELLMPVGHLVKHEIVKLG 426
Query: 185 QDIGGQDLVNLILEESHTCY-LGKRDKRYEWGYGCNSCPACYLRQ 228
++G L + +CY G+R C C CY+R+
Sbjct: 427 LEVGAP------LHLTWSCYDNGERH--------CGRCGPCYMRR 457
>gi|15922650|ref|NP_378319.1| succinoglycan biosynthesis regulator [Sulfolobus tokodaii str. 7]
gi|74573079|sp|Q96Y49|QUEC2_SULTO RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=Archaeosine biosynthesis protein queC 2; AltName:
Full=PreQ(0) synthase 2
gi|15623440|dbj|BAB67428.1| 460aa long hypothetical succinoglycan biosynthesis regulator
[Sulfolobus tokodaii str. 7]
Length = 460
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 96/234 (41%), Gaps = 30/234 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
KK L++ SGG DS+ ++ L + + L F+Y +K E R V KKI E +
Sbjct: 236 KKIKKVLVIASGGLDSTVAATYLLRQGYEITLLHFNY--HHKAEEREREAV-KKIAEYLQ 292
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFA 119
+ D + I H++L K ++D + +VP RN+IF A
Sbjct: 293 VPLIEIDTD------LFKIIGHTTLLKGGGEIVKDRLGEEGAEFAHEWVPARNLIFYSVA 346
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWLKK 177
LA G I G+ + YPD + +R A + G V V P+ L K
Sbjct: 347 LALAEAYGYDAIASGINLEEAGAYPDNEMEFVRLFAKLSPYATGPNKKVEVMMPVGNLVK 406
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+E KL +IG L + +CY G + C C CY+R+ +
Sbjct: 407 HEIVKLGVEIGAP------LHLTWSCYEGGQKH-------CGKCGPCYMRKMAF 447
>gi|260593106|ref|ZP_05858564.1| ExsB protein [Prevotella veroralis F0319]
gi|260534992|gb|EEX17609.1| ExsB protein [Prevotella veroralis F0319]
Length = 217
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKIVELMPK 66
++++ SGG DS T L +D+ ET+ SFDYGQ + KK +
Sbjct: 4 SVIIVSGGLDSITLL------YDKAETIALAISFDYGQNHG----------KKELPYAEY 47
Query: 67 WKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
LG HI +PL + SSL + ++ N+ +T VP RN I L A
Sbjct: 48 HCQKLGIPHITIPLTFMHQYFKSSLLEGAEAIPEGHYEEENMKSTVVPFRNGIMLAIATG 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + + I D++ YPDCR + I A++ A + G V V P + K +
Sbjct: 108 IAESHELKRVYIANHGGDHTIYPDCRPEFIDAMDKATSAGTFVDVRVEAPYTNISKADIV 167
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G + ++ +CY G C C C R++ + +
Sbjct: 168 RRGTALG------IDYAKTWSCYKGSE-------IHCGKCGTCVERKEAFAD 206
>gi|332797158|ref|YP_004458658.1| exsB protein [Acidianus hospitalis W1]
gi|332694893|gb|AEE94360.1| exsB protein [Acidianus hospitalis W1]
Length = 463
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 33/238 (13%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K L++ SGG DS+ ++ L + + L F+Y R+K E + R VRK I E +
Sbjct: 239 KDKKKVLVIASGGLDSTVAATYLLRQGHEITLLHFNY--RHKAEEKEREAVRK-ISEYLQ 295
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNIIFLVFA 119
+ D + I H++L K +++ + +VP RN+IF A
Sbjct: 296 VPYIEIDTD------LFKIIGHTTLLKGGGEIVKERQGEEGAEFAHEWVPARNLIFFSVA 349
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKK 177
+A G I G+ + YPD + +R + G + V P+ L K
Sbjct: 350 LAIAEAYGFDAIASGINLEEAGAYPDNEMEFVRLFSKLSPYATGPNKKIEVMMPVGNLVK 409
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+E KL +IG L + +CY G C C CY+R+ M FK
Sbjct: 410 HEIVKLGVEIGAP------LHLTWSCYEGGEKH-------CGKCGPCYMRK---MAFK 451
>gi|194397564|ref|YP_002038369.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae G54]
gi|194357231|gb|ACF55679.1| conserved hypothetical protein [Streptococcus pneumoniae G54]
Length = 177
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|303258711|ref|ZP_07344691.1| hypothetical protein CGSSp9vBS293_06269 [Streptococcus pneumoniae
SP-BS293]
gi|303261875|ref|ZP_07347821.1| hypothetical protein CGSSp14BS292_10694 [Streptococcus pneumoniae
SP14-BS292]
gi|303263738|ref|ZP_07349660.1| hypothetical protein CGSSpBS397_07994 [Streptococcus pneumoniae
BS397]
gi|303265728|ref|ZP_07351627.1| hypothetical protein CGSSpBS457_09800 [Streptococcus pneumoniae
BS457]
gi|303268569|ref|ZP_07354361.1| hypothetical protein CGSSpBS458_09656 [Streptococcus pneumoniae
BS458]
gi|302636958|gb|EFL67447.1| hypothetical protein CGSSp14BS292_10694 [Streptococcus pneumoniae
SP14-BS292]
gi|302640212|gb|EFL70667.1| hypothetical protein CGSSpBS293_06269 [Streptococcus pneumoniae
SP-BS293]
gi|302641848|gb|EFL72203.1| hypothetical protein CGSSpBS458_09656 [Streptococcus pneumoniae
BS458]
gi|302644855|gb|EFL75103.1| hypothetical protein CGSSpBS457_09800 [Streptococcus pneumoniae
BS457]
gi|302646776|gb|EFL77001.1| hypothetical protein CGSSpBS397_07994 [Streptococcus pneumoniae
BS397]
Length = 177
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|303254714|ref|ZP_07340816.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae BS455]
gi|301802471|emb|CBW35229.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
gi|302598426|gb|EFL65470.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae BS455]
Length = 177
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|332074122|gb|EGI84600.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
GA41301]
Length = 177
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|222055806|ref|YP_002538168.1| ExsB family protein [Geobacter sp. FRC-32]
gi|221565095|gb|ACM21067.1| ExsB family protein [Geobacter sp. FRC-32]
Length = 196
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
S + L SGG DS+ A + L DYGQR + + E C R+ + EL
Sbjct: 2 SIVTLVSGGLDSTLIAKLAQEEGLIQHPLFVDYGQRAR-DQELAAC-RRGMSEL------ 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L E + L+ G + HS LT + ++D F PGRN++FL+ AA A ++
Sbjct: 54 GLPEPRVADLSGFGALIHSGLTDSSLDIVKD-----AFTPGRNMLFLLIAAAYAVQVKAD 108
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA--QDI 187
I IG+ S +PD +R E I M + + PL K + LA + I
Sbjct: 109 AISIGLLHESTSLFPDQTSAFLRDAEVLIRRCMNRDIKLLAPLASFLKTDVVALAKLKRI 168
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
G +++C+ G + C +C AC
Sbjct: 169 GA----------TYSCHTGNEET-------CGTCIAC 188
>gi|84489963|ref|YP_448195.1| ATPase [Methanosphaera stadtmanae DSM 3091]
gi|110816234|sp|Q2NF51|QUEC_METST RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|84373282|gb|ABC57552.1| predicted ATPase [Methanosphaera stadtmanae DSM 3091]
Length = 226
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 36/235 (15%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A+ + SGG DS+ S + +D + ++F+YGQ++ ++ L K I E
Sbjct: 3 PKAITVLSGGLDSTVATSIYANDYD-ITAITFNYGQQS---IKQELKHAKMICE------ 52
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM-KIQDNNLPN----------TFVPGRNIIFL 116
L HI + L L +IS+SSLT + ++ + DN+L + +VP RN +F
Sbjct: 53 -KLDMKHIVIDLPWLKEISNSSLTTDKSIPQPSDNDLDDYDKSIETAKSVWVPARNTVFC 111
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
A + A + I++G + +PD + +++ I G + + PL+ +
Sbjct: 112 SIALSYAESIQAKIIIVGWDYEEAVTFPDNSKEYLKSFNETIKYGSFDDIEIKAPLIDMT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + K + VN + S++CY+G C C +C R++ +
Sbjct: 172 KEDIVKKGHE------VNAPMNISYSCYVG-------CDTHCGVCESCKRRKRAF 213
>gi|148984203|ref|ZP_01817498.1| hypothetical protein CGSSp3BS71_03242 [Streptococcus pneumoniae
SP3-BS71]
gi|168486380|ref|ZP_02710888.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC1087-00]
gi|225857369|ref|YP_002738880.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae P1031]
gi|147923492|gb|EDK74605.1| hypothetical protein CGSSp3BS71_03242 [Streptococcus pneumoniae
SP3-BS71]
gi|183570619|gb|EDT91147.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC1087-00]
gi|225725333|gb|ACO21185.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae P1031]
gi|301800562|emb|CBW33202.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
Length = 177
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|302185402|ref|ZP_07262075.1| ExsB family protein [Pseudomonas syringae pv. syringae 642]
Length = 200
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELE-CRLCVRKKIVELMPKW 67
S + L SGG DS+ A + ++ L DYGQR + EL CR+ ++
Sbjct: 2 SIVTLVSGGLDSTLVAKLAQEEGLQIFPLFVDYGQRARDRELAACRVAMKTL-------- 53
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L E I L G + S LT + ++ I D+ F PGRN++FL+ AA A++
Sbjct: 54 --GLPEPEIASLGGFGKLIRSGLT-DTSLHIIDD----AFTPGRNMLFLLTAAAYAHQKN 106
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I IG+ S +PD + E I+L M + V PL K + LA +
Sbjct: 107 ADAISIGLLHESTSLFPDQTSGFLAEAERMISLCMGRTIKVLAPLSVFTKPDVVALAAEK 166
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
G + +++C++G C +C +C
Sbjct: 167 G--------ISGTYSCHIGDE-------VPCGNCISC 188
>gi|307565167|ref|ZP_07627671.1| protein ExsB [Prevotella amnii CRIS 21A-A]
gi|307346125|gb|EFN91458.1| protein ExsB [Prevotella amnii CRIS 21A-A]
Length = 234
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 36/236 (15%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVE 62
K +++++ SGG DS T L D D +SFDYGQ +N++ L C +
Sbjct: 16 KSMRNSVIIVSGGLDSITLLYEKAD--DIALAISFDYGQNHSKNELPLAEYHCKK----- 68
Query: 63 LMPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLV 117
LG HI +PL + SSL + ++ N+ +T VP RN I L
Sbjct: 69 --------LGIPHITIPLKFMNVYLKSSLLEGSEAIPEGHYEEENMKSTVVPFRNGIMLS 120
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A +A + ++I D++ YPDCR + I A+ A G +V V P + K
Sbjct: 121 IAIGIAESHNLKYVMIANHGGDHTIYPDCRPEFISAMNKAACAGTYINVKVVAPYTNISK 180
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E K +G + ++ +CY G C C C R++ +++
Sbjct: 181 TEIVKRGVALG------IDYNKTWSCYKGGEKH-------CGKCGTCVERKEAFLK 223
>gi|148982372|ref|ZP_01816737.1| predicted aluminum resistance protein [Vibrionales bacterium
SWAT-3]
gi|145960508|gb|EDK25874.1| predicted aluminum resistance protein [Vibrionales bacterium
SWAT-3]
Length = 86
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K++
Sbjct: 4 AVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHKLEIEVAESLAKEL---------G 54
Query: 71 LGEDHILPLAILGDISHSSLTKN 93
+ ++ + +L +++ SSLT++
Sbjct: 55 VKAHKVMDVTLLNELAISSLTRD 77
>gi|282163370|ref|YP_003355755.1| archaeosine biosynthesis protein QueC [Methanocella paludicola
SANAE]
gi|282155684|dbj|BAI60772.1| archaeosine biosynthesis protein QueC [Methanocella paludicola
SANAE]
Length = 228
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 27/230 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELEC------RLCVRKKIVEL 63
+++L S G DS+ ALD F L+FDYGQR +E+E R VR +++E
Sbjct: 4 SIVLLSSGLDSAVAFKMALDAFGVDLALTFDYGQRAADMEIESAKMICERFGVRHEVIEA 63
Query: 64 MPKWKDSLGEDHILPLAILGD-ISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAAT 121
W L + + L G+ + S T+ +K + + +VP RN F+ AA
Sbjct: 64 --PW---LEDVTLTALVNRGESVPTPSETELDEIKGKARETAHAVWVPNRNGAFINIAAC 118
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A L + +IV G + + +PD + AI ++ E+H V P++ + K E
Sbjct: 119 FADALKVDHIVCGFNAEEGATFPDNTPAFVEAINKSLYYSTENHAKVIAPVIDMDKVEII 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K I L+ S +CY+ C C +C R + +
Sbjct: 179 KKGMSIDAP------LDLSWSCYVSGEKP-------CGKCESCVRRARAF 215
>gi|148997816|ref|ZP_01825380.1| hypothetical protein CGSSp11BS70_02874 [Streptococcus pneumoniae
SP11-BS70]
gi|149011370|ref|ZP_01832617.1| hypothetical protein CGSSp19BS75_08167 [Streptococcus pneumoniae
SP19-BS75]
gi|168575048|ref|ZP_02721011.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
MLV-016]
gi|307068385|ref|YP_003877351.1| hypothetical protein SPAP_1765 [Streptococcus pneumoniae AP200]
gi|147756315|gb|EDK63357.1| hypothetical protein CGSSp11BS70_02874 [Streptococcus pneumoniae
SP11-BS70]
gi|147764360|gb|EDK71291.1| hypothetical protein CGSSp19BS75_08167 [Streptococcus pneumoniae
SP19-BS75]
gi|183578774|gb|EDT99302.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
MLV-016]
gi|306409922|gb|ADM85349.1| hypothetical protein SPAP_1765 [Streptococcus pneumoniae AP200]
Length = 177
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQ----IAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|282881611|ref|ZP_06290280.1| protein ExsB [Prevotella timonensis CRIS 5C-B1]
gi|281304597|gb|EFA96688.1| protein ExsB [Prevotella timonensis CRIS 5C-B1]
Length = 218
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L++ SGG DS T L R +SFDYG + +K + L +
Sbjct: 5 SLIIVSGGMDSITMLYEYQQRI--AIGVSFDYGSNHN----------QKEIPLAKMHCER 52
Query: 71 LGEDHI-LPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG HI +PL+ + D SSL + ++ N+ +T VP RN I L LA
Sbjct: 53 LGIRHIVIPLSFIHDYFKSSLLEGDDAIPEGHYEEENMKSTVVPFRNGIMLAVGCGLAVS 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++I D++ YPDCR I + A+ G +T+ P + K E +
Sbjct: 113 NHLKYVMIANHGGDHTIYPDCRPAFIDSFSQAMTAGTFEGITILAPYTRISKGEIALRGK 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+G + E+ +CY G DK+ C C C R++
Sbjct: 173 KLG------INYAETWSCYKGG-DKQ------CGKCGTCVERKE 203
>gi|228471015|ref|ZP_04055859.1| ExsB protein [Porphyromonas uenonis 60-3]
gi|228307235|gb|EEK16258.1| ExsB protein [Porphyromonas uenonis 60-3]
Length = 217
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 30/228 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-ELMPKWK 68
++L+ SGG DS+T L R + + FDYG ++ L K I EL +
Sbjct: 3 NSLIALSGGVDSTTLLYEY--REEIACAVGFDYGSKHNAR---ELAAAKAICRELEIPYL 57
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAY 124
I+PLA +G+ S L M++ D N+ +T VP RN I L A LA
Sbjct: 58 -------IIPLAFIGEYFRSDLLLSGGEMQLGDYSEENMSSTVVPFRNGIMLSVLAGLAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ ++I D++ YPDCR ++ + AI G + V + P L K E
Sbjct: 111 SRDLQQVLIANHFGDHAIYPDCRESFVKPMGEAITAGTSNGVKLVAPYTALTKAEIVARG 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + ++++CY G C C C R ++
Sbjct: 171 TRLG------VPYSKTYSCYQGGERH-------CGRCGTCRERHDAFV 205
>gi|190893996|ref|YP_001984290.1| probable succinoglycan biosynthesis transcriptional regulator
protein [Rhizobium etli CIAT 652]
gi|190699657|gb|ACE93740.1| probable succinoglycan biosynthesis transcriptional regulator
protein [Rhizobium etli CIAT 652]
Length = 191
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DS+ A++ +V L +YGQR ++ E C + +++L L E
Sbjct: 1 MSGGLDSTLVAYLAIEEGLKVHPLFVNYGQR-AIDRELAAC-KNSMMKL-----GILDEL 53
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
I L+ G + S LT ++D F PGRN++FL+ AA A+++ + IG
Sbjct: 54 EIADLSGYGRLIRSGLTDPNKHIVED-----AFTPGRNMLFLLTAAAHAHQVNADAVSIG 108
Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL--AQDIGGQDL 192
+ + S +PD ++ E I M + V PL K E +L A+ +GG
Sbjct: 109 LLHEETSLFPDQTSGFLQDAEALITRIMGRSIKVLAPLAAFHKDEVIQLAKAKGVGG--- 165
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
+++C+LG + C C AC
Sbjct: 166 -------TYSCHLGLEEP-------CGECIAC 183
>gi|20092990|ref|NP_619065.1| succinoglycan biosynthesis regulator [Methanosarcina acetivorans
C2A]
gi|74527841|sp|Q8TIF3|QUEC_METAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|19918307|gb|AAM07545.1| succinoglycan biosynthesis regulator [Methanosarcina acetivorans
C2A]
Length = 231
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELMPK- 66
A+ L S G DS L+ A + + ++FDYGQR ++E ++C I ++ K
Sbjct: 3 AITLLSSGLDSVAALAIAAESLEIEMAITFDYGQRAGQREIEYSRKVCEHYGIEHIVIKL 62
Query: 67 -WKDSL--------GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
W + GED +P DI ++ I + + +VP RN + L
Sbjct: 63 DWLAGITNTSLVNRGED--VPALSFEDIDEAA-----PAAITEASAKAVWVPNRNGVMLN 115
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A + A +V+G + +PD + A++ A + ++ V V PL+ L K
Sbjct: 116 IAGSFAESRDCDYLVVGFNGEEAGTFPDNSMAYVEAMDNAFSYSTQNGVRVLAPLIELGK 175
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E K A + V LE S +CY G+ C C +C R + +
Sbjct: 176 TEIVKKALE------VKAPLEYSWSCYHGEETP-------CGGCESCVRRARAF 216
>gi|168491358|ref|ZP_02715501.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC0288-04]
gi|183574270|gb|EDT94798.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC0288-04]
Length = 177
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ +E ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETIEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|328885754|emb|CCA58993.1| Queuosine Biosynthesis QueC ATPase [Streptomyces venezuelae ATCC
10712]
Length = 236
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 97/233 (41%), Gaps = 34/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+L+FSGG DS+ LD V LSF+YGQR+ EL D
Sbjct: 10 AVLIFSGGLDSAVTAYKLLDAGVTVSLLSFNYGQRHVKELA-----------QAATLADQ 58
Query: 71 LGEDH-ILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H I+ L L I S + A+++ + + +T VP RN I L AA A
Sbjct: 59 LGVSHDIVDLTSLNRILGGSALTDPAIEVPHGHYRAETMRSTVVPNRNAIMLEIAAGAAV 118
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH----TPLMWLKKYET 180
G + G D++ YPDCR + IE A+ G E H+ P + L K +
Sbjct: 119 AAGADAVAFGAHSGDHAIYPDCRPEFFTLIEAAMKAGNEGHIVADFQLVAPFLQLTKADI 178
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + ++ + + +CY G C +C C R++ + E
Sbjct: 179 VREGARL------DVPFKLTWSCYEGGE-------LHCGACGTCVERREAFDE 218
>gi|169833883|ref|YP_001695150.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
Hungary19A-6]
gi|168996385|gb|ACA36997.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae Hungary19A-6]
Length = 177
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQYYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|192896495|gb|ACF06644.1| ToyM [Streptomyces rimosus]
Length = 238
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 32/232 (13%)
Query: 10 SALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
SA+++ SGG DS+T L+ +A+ R+ R+ ++ DYGQR++ E++ +
Sbjct: 12 SAVVVLSGGMDSTTLLAHYAMLRY-RLTAVTVDYGQRHRREIDAARTIAGHYG------- 63
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLA 123
E H++ L+ +G + S + + + + ++ T VP RN I A A
Sbjct: 64 ---AEHHVVDLSGIGVLLGGSALTDSEVDVPSGHYAEESMRATVVPNRNAILANVAVGAA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKYETW 181
+ +G+ D+ YPDCR + A++ + + E T V P + K +
Sbjct: 121 VARQAGIVALGMHAGDHFVYPDCRPAFVEALDGLVRVANEGFATPRVEAPFIHWSKTDIA 180
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + L++S +CY G C +C CY R++ + +
Sbjct: 181 RYGSRL------EAPLDKSWSCYRGGE-------LHCGTCGTCYERREAFRD 219
>gi|83953728|ref|ZP_00962449.1| hypothetical protein NAS141_05873 [Sulfitobacter sp. NAS-14.1]
gi|83841673|gb|EAP80842.1| hypothetical protein NAS141_05873 [Sulfitobacter sp. NAS-14.1]
Length = 233
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+++ SGG DS + + +SFDYGQR++ EL+ LC ++ V
Sbjct: 4 IVICSGGLDSVSLAHMVAAKRKLTGLVSFDYGQRHRKELDYAALCAKRLDVP-------- 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D I I ++ S+LT +V + + + T VP RN I L A +A G
Sbjct: 56 --HDIIDMRGIGAALTGSALTDDVDVPDGHYAEETMRVTVVPNRNAIMLTVAYGIAAARG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR D +A E + ++ + V+++TP + K + Q
Sbjct: 114 DQAVATAVHGGDHFIYPDCRPDFTQAFEFMQYMALDGYADVSLYTPFVHRSKADIVTEGQ 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
N E+ +CY G + C C C R++ +
Sbjct: 174 ------RHNTPFAETWSCYKGGV-------HHCGRCGTCVERREAF 206
>gi|182684725|ref|YP_001836472.1| hypothetical protein SPCG_1755 [Streptococcus pneumoniae CGSP14]
gi|182630059|gb|ACB91007.1| hypothetical protein SPCG_1755 [Streptococcus pneumoniae CGSP14]
Length = 190
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 12/81 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMP 65
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ R +++ +
Sbjct: 15 KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITRETAKEQGI---- 70
Query: 66 KWKDSLGEDHILPLAILGDIS 86
HIL +++LG I+
Sbjct: 71 -------RHHILDMSLLGQIT 84
>gi|52550044|gb|AAU83893.1| transcriptional regulator [uncultured archaeon GZfos34H9]
Length = 242
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ + A + YGQR + K++VE + + ++
Sbjct: 5 AVCVCSGGIDSTVTATIAAKEGYELHFFHASYGQRAEAR-------EKEVVEEIAAYLNA 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKI---------QDNNLPNTFVPGRNIIFLVFAAT 121
E L L ++ SSLT ++A + ++ P+T+VP RNII L A+
Sbjct: 58 -KELKFAELPFLKELGGSSLT-DIARSVPVGKEVNLDEEKETPSTWVPCRNIILLANASA 115
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV---TVHTPLMWLKKY 178
A + I +G + YPD + + + + + T+ PL+ L K
Sbjct: 116 FAEVISADAIFVGFNAEEARSYPDNEKEFVDRYNAVLEKAVAYYCRPPTLKAPLVDLLKP 175
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E K ++ L+ S++CYLG DK++ C C +C R++G+ E
Sbjct: 176 EIIKKGVEVKAP------LQLSYSCYLG--DKKH-----CGICESCQHRRRGFKE 217
>gi|89893414|ref|YP_516901.1| hypothetical protein DSY0668 [Desulfitobacterium hafniense Y51]
gi|110816201|sp|Q24ZT5|QUEC1_DESHY RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|89332862|dbj|BAE82457.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 220
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 32/224 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+LLFSGG DS+ L W L R + L +YGQ++ E L KI+ KD
Sbjct: 7 VLLFSGGIDSTVLLFWLLSRNYEIFPLFINYGQKS---YEGELEAINKIL------KDLN 57
Query: 72 GEDHILPLAI--LGDISHSSLTKNVAMKIQDNN--LPNTFVPGRNIIFLVFAATLAYRLG 127
++++L L + L + +L I +N + F P RN+I L AAT Y+L
Sbjct: 58 TKNNLLTLNMPELQLVGSGALVGEYPKNISSHNEWYASEFFPNRNMILLSIAATYGYKLQ 117
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ I IGV Y DT R A+ + + + + + + K+ ++
Sbjct: 118 ISKIAIGVVGDSY-------QDTTRTFLEAMEMTLAQSIARYELIAPFAGHPRQKVIEE- 169
Query: 188 GGQDLVNLILEESHTC-YLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ + L+ + +C +G R C C +CY R+K
Sbjct: 170 --AYRLQVPLKSTFSCNAMGNRH--------CLLCTSCYEREKA 203
>gi|313894320|ref|ZP_07827885.1| protein ExsB [Veillonella sp. oral taxon 158 str. F0412]
gi|313441144|gb|EFR59571.1| protein ExsB [Veillonella sp. oral taxon 158 str. F0412]
Length = 229
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + I+E
Sbjct: 7 AIVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAV----AILEYYGIEG 62
Query: 69 DSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ + + ++ SS + + + +T+VP RN +FL AA+LA
Sbjct: 63 KTMDVTKLFAFSNCSLLTQSSEEIPQGSYKEQQEAEGEGTVSTYVPFRNGLFLSAAASLA 122
Query: 124 YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L I G D +G YPDC +++ AI G ++ P + K +
Sbjct: 123 LSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINFNKADIV 182
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K +G + + +CY G DK C C C RQ +
Sbjct: 183 KEGLRLG------VPYHLTWSCYEGG-DKP------CGHCGTCIDRQAAFQ 220
>gi|312898409|ref|ZP_07757799.1| ExsB protein [Megasphaera micronuciformis F0359]
gi|310620328|gb|EFQ03898.1| ExsB protein [Megasphaera micronuciformis F0359]
Length = 229
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 13 LLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L SGG DS+T L+ A+D + + V LS YGQ++K EL C +KI + S
Sbjct: 5 VLLSGGIDSTTALAQAVDTYGAENVIALSVLYGQKHKKELNCA----EKIANYYGVRRIS 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------------NTFVPGRNIIFLVF 118
++ L SH+SL +N + + +T+VP RN IFL
Sbjct: 61 FD------VSPLFSYSHNSLMENSDKAVPQTSYAEQIEETKGQSPVSTYVPFRNGIFLSA 114
Query: 119 AATLAYRLGITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
AA +A L +V + + YPDC A++TA+ G +T+ P + +
Sbjct: 115 AAGVALSLDCERVVYGAHADDAAGAAYPDCSPAFFDAMKTAVYEGTGGGITLEAPFIHMN 174
Query: 177 KYETWKLAQDIGGQDL-VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K DI + L +++ E + +CY G DK C C C R+ +
Sbjct: 175 K-------ADIVAEGLRLHVPYELTWSCYEGG-DKP------CGLCGTCRDREAAF 216
>gi|307127972|ref|YP_003880003.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae 670-6B]
gi|306485034|gb|ADM91903.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae 670-6B]
Length = 177
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|269798608|ref|YP_003312508.1| exsB protein [Veillonella parvula DSM 2008]
gi|269095237|gb|ACZ25228.1| exsB protein [Veillonella parvula DSM 2008]
Length = 229
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 26/230 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + I+E
Sbjct: 7 AVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAI----AILEYYGMEG 62
Query: 69 DSLGEDHILPLAILGDISHSS--LTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
++ + + ++ SS + + + QD +T+VP RN +FL AA+LA
Sbjct: 63 KTMDVTKLFAFSNCSLLTQSSEDIPQGSYKEQQDAEGEGTVSTYVPFRNGLFLSAAASLA 122
Query: 124 YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L I G D +G YPDC +++ AI G ++ P + K +
Sbjct: 123 LSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINANKADIV 182
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K +G + + +CY G DK C C C R K +
Sbjct: 183 KEGLRLG------VPYHLTWSCYEGG-DKP------CGHCGTCIDRAKAF 219
>gi|281419887|ref|ZP_06250886.1| ExsB protein [Prevotella copri DSM 18205]
gi|281406014|gb|EFB36694.1| ExsB protein [Prevotella copri DSM 18205]
Length = 217
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 32/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++++ SGG DS T L D+ D + +SF+YG + ++ + +
Sbjct: 4 SVIIVSGGMDSITLL---YDKKDEIALGISFNYGSNH----------NEREIPFAKMHCE 50
Query: 70 SLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG HI + L + SSL + D+N+ +T VP RN I L A +A
Sbjct: 51 RLGIKHITIDLGFMHQYFKSSLLEGADAIPEGHYADDNMKSTVVPFRNGIMLSIAIGIAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ + I D++ YPDCR + I+AI+ A G V V P + K + ++
Sbjct: 111 SNNLKKVFIANHGGDHTIYPDCRPEFIKAIDEAAEAGTFVDVRVVAPYTNITKGQIAEIG 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G + E+ +CY G C C C R++ E
Sbjct: 171 KKLG------IDYAETWSCYKGGEKH-------CGKCGTCVERKEALAE 206
>gi|294794492|ref|ZP_06759628.1| ExsB protein [Veillonella sp. 3_1_44]
gi|294454822|gb|EFG23195.1| ExsB protein [Veillonella sp. 3_1_44]
Length = 229
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCV------RKKIVE 62
A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + + + K ++
Sbjct: 7 AVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNMKGKTMD 66
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + S + L + DI S + + +T+VP RN +FL AA+L
Sbjct: 67 VTKLFAFS---NCSLLVQSSEDIPQGSYKEQ--QDAEGKGTVSTYVPFRNGLFLSAAASL 121
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A L I G D +G YPDC +++ AI G ++ P + K +
Sbjct: 122 ALSLDCGYIYYGAHSDDAAGNAYPDCTEQFYKSMGDAIFEGSGKECSLEAPFINANKADI 181
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + N+ + +CY G DK C C C R K +
Sbjct: 182 VKEGLRL------NVPYHLTWSCYEGG-DKP------CGHCGTCIDRAKAF 219
>gi|307634707|gb|ADI83313.2| ExsB family protein [Geobacter sulfurreducens KN400]
Length = 194
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS+ A + V L +YGQ+ V+ E C R +P
Sbjct: 6 LVSGGLDSTLVGVLAREDGLSVYPLFINYGQK-AVQQEWEACQRVHQALNLPTPIK---- 60
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ L+ G + S LT N M +++ F PGRN++FL+ + AY++G + + I
Sbjct: 61 ---MDLSGFGKVICSGLT-NDKMDVKEE----AFTPGRNLLFLLMGSAYAYQVGASAVAI 112
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
G+ +S +PD R + E AI + ++ + PL K + KL+ + G
Sbjct: 113 GLLTEQFSLFPDQRTLFLEKAEQAIEAALGKNIKLLAPLSDFSKMDVVKLSIEKG----- 167
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
+ +++C+ G C C +C
Sbjct: 168 ---IAGTYSCHAGGDQP-------CGHCISC 188
>gi|332201182|gb|EGJ15253.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
GA47901]
Length = 177
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|288802312|ref|ZP_06407752.1| ExsB protein [Prevotella melaninogenica D18]
gi|288335279|gb|EFC73714.1| ExsB protein [Prevotella melaninogenica D18]
Length = 218
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 93/230 (40%), Gaps = 38/230 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKIVELMPK 66
++++ SGG DS T L +D+ ET+ SFDYGQ + K +
Sbjct: 4 SVIIVSGGLDSITLL------YDKAETIALAISFDYGQNHGA----------KELPYAQY 47
Query: 67 WKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
+ LG HI +PL+ + SSL ++ N+ +T VP RN I L A
Sbjct: 48 HCEKLGIPHITIPLSFMHQYFKSSLLDGADAIPEGHYEEENMKSTVVPFRNGIMLAIATG 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + + I D++ YPDCR + I A+ A G V V P + K E
Sbjct: 108 IAESHELKRVYIANHGGDHTIYPDCRPEFIHAMNGATEAGTFVKVRVEAPYTEITKAEIV 167
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++ +CY G C C C R++ +
Sbjct: 168 ARGAALG------IDYSKTWSCYKGADIH-------CGKCGTCVERKEAF 204
>gi|332199787|gb|EGJ13862.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
GA41317]
Length = 177
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQRHHLEIQ----IAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|83942508|ref|ZP_00954969.1| hypothetical protein EE36_15747 [Sulfitobacter sp. EE-36]
gi|83846601|gb|EAP84477.1| hypothetical protein EE36_15747 [Sulfitobacter sp. EE-36]
Length = 233
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+++ SGG DS + +SFDYGQR++ EL+ LC ++ V
Sbjct: 4 IVICSGGLDSVSLAHMVAANRKLTGLVSFDYGQRHRKELDYAALCAKRLDVR-------- 55
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D I I ++ S+LT +V + + + T VP RN I L A +A G
Sbjct: 56 --HDIIDMRGIGAALTGSALTDDVDVPDGHYAEETMRVTVVPNRNAIMLTVAYGIAAARG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR D +A E + ++ + V+++TP + K + Q
Sbjct: 114 DQAVATAVHGGDHFIYPDCRPDFTQAFEFMQYMALDGYADVSLYTPFVHRSKADIVTEGQ 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
N E+ +CY G + C C C R++ +
Sbjct: 174 ------RHNTPFAETWSCYKGGV-------HHCGRCGTCVERREAF 206
>gi|224419252|ref|ZP_03657258.1| exsB protein [Helicobacter canadensis MIT 98-5491]
gi|253826968|ref|ZP_04869853.1| transcription regulator related protein ExsB [Helicobacter
canadensis MIT 98-5491]
gi|313142755|ref|ZP_07804948.1| ExsB [Helicobacter canadensis MIT 98-5491]
gi|253510374|gb|EES89033.1| transcription regulator related protein ExsB [Helicobacter
canadensis MIT 98-5491]
gi|313131786|gb|EFR49403.1| ExsB [Helicobacter canadensis MIT 98-5491]
Length = 223
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 35/232 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS ++ A+ V L +YGQR +K+ + +
Sbjct: 4 AIVLASGGLDSCVSVACAIKDGYEVCLLHINYGQRT----------QKRENQAFNDIANY 53
Query: 71 LGEDH--ILPLAILGDISHSSLTKNVAMKIQDNNLPN-------TFVPGRNIIFLVFAAT 121
G + I+ + L I SSL + ++ I+ +P+ T+VP RN + A +
Sbjct: 54 YGIQNKLIVDIDYLRQIGGSSLVDS-SIPIEQETIPSSTGQIPMTYVPFRNANMISIAVS 112
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYE 179
A +G I +G E D SGYPDC + + + +++V + TPL+ L K E
Sbjct: 113 WAEVIGAKKIYVGAVEEDSSGYPDCMEIFYEKFNELLKVALLPQNNVEILTPLIHLNKAE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ Q I L+ L + +CY DK C C +C LR +G+
Sbjct: 173 I--VHQGI----LLKAPLHLTWSCY-QNEDK------ACGVCESCKLRLRGF 211
>gi|163784158|ref|ZP_02179097.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
gi|159880577|gb|EDP74142.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
Length = 166
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 82 LGDISHSSLT-KNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
L I S+LT + V + +D + P T VP RN+ FL AA+ I NI IG+
Sbjct: 7 LKGIEGSALTDEKVDIPSEDYPDQPPITTVPMRNLNFLSIAASFCDVYEIENIGIGIHSV 66
Query: 139 DYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
D S YPDCR + + E IN ++ + V+TP + + K + KL ++G
Sbjct: 67 D-SPYPDCRAEFASSAEAVINASSVMVAKKKNRIKVYTPFLGMTKTDVLKLGLELG---- 121
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E++++CY G C C C RQ+ +
Sbjct: 122 --VPYEKTYSCYRGTIPP-------CGECATCRQRQEAF 151
>gi|87307052|ref|ZP_01089198.1| Predicted PP-loop superfamily ATPase [Blastopirellula marina DSM
3645]
gi|87290425|gb|EAQ82313.1| Predicted PP-loop superfamily ATPase [Blastopirellula marina DSM
3645]
Length = 219
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKWKD 69
+ + SGG DS+T L +D V +S +YGQR+ EL+ +LC + + +++
Sbjct: 5 VAVVSGGMDSATLLYHLIDAGHDVRAISINYGQRHVKELDYARQLCDKVGVPQIVADLSA 64
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I PL +S + ++N + T VP RN+I L + A
Sbjct: 65 ------INPLFGANSLSGREIEIPEGHYAEEN-MKLTVVPNRNMILLSVSIAWAISQECV 117
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G D++ YPDCR + A++ A L S V + P + + K + + ++G
Sbjct: 118 AVAYGAHSGDHAIYPDCRPEFAAAMDQAAKLCDWSAVELWRPFVDIDKGDIAQRGSELG- 176
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ E + TCY G + C C AC R++ + +
Sbjct: 177 -----VPYELTWTCYKGLAEH-------CGKCGACVERKEAFAK 208
>gi|134046496|ref|YP_001097981.1| exsB protein [Methanococcus maripaludis C5]
gi|167016435|sp|A4FZY3|QUEC_METM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|132664121|gb|ABO35767.1| exsB protein [Methanococcus maripaludis C5]
Length = 233
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 11 ALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ T L + +D + T++F+YGQ + L + +KI E++
Sbjct: 3 AICVLSGGLDSAVTSLVAKSENYD-ITTVTFNYGQ---MALNQEIKSAEKISEILN---- 54
Query: 70 SLGEDHILPLAILGDISHSSL-TKNVA---------MKIQDNNLPNTFVPGRNIIFLVFA 119
+ H++ + + + S S L T N+ + + + +VP RN+I A
Sbjct: 55 --ADHHVIDINFVKEFSKSGLNTGNIPEPEKEDLDDFEKSEKTMKAVWVPARNMIMFSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A + I G+ + +PD + I ++ G + V + PL L K E
Sbjct: 113 SGFAEGIDAEKIFSGLNREEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYELNKPE 172
Query: 180 TWKLAQDIGGQ-DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL +++ + DL +++ S++CY RD ++ + C +C +C R++ + E
Sbjct: 173 IAKLGKELELKLDLE--VIKYSYSCY---RDNGEDYLH-CGTCESCMRRKRAFKE 221
>gi|323475431|gb|ADX86037.1| exsB protein [Sulfolobus islandicus REY15A]
Length = 464
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 40/239 (16%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K L++ SGG DS+ + L V + F+Y +K E R VRK
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEREREAVRK------- 289
Query: 66 KWKDSLGEDHILPLA-----ILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNII 114
+ E +PL + I H++L K ++D + +VP RN+I
Sbjct: 290 -----IAEHLQVPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLI 344
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPL 172
F A +A G I G+ + YPD + IR + + G V V P+
Sbjct: 345 FFSAALAIAEAYGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPV 404
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K+E KL +IG L + +CY G + C C CY+R+ +
Sbjct: 405 GNLMKHEIVKLGYEIGAP------LHLTWSCYEGGQKH-------CGKCGPCYMRRVAF 450
>gi|300727735|ref|ZP_07061121.1| protein ExsB [Prevotella bryantii B14]
gi|299775023|gb|EFI71629.1| protein ExsB [Prevotella bryantii B14]
Length = 217
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
++++ SGG DS T L + + +SFDYG + K + +
Sbjct: 4 SVIVVSGGLDSITLLYEK--QAEIALGISFDYGSNH----------NSKEIPFAKMHCER 51
Query: 71 LGEDHI-LPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATLAYR 125
LG HI + L + SSL + + N N+ +T VP RN I L A LA
Sbjct: 52 LGIKHITINLEFMHQYFKSSLLEGGDAIPEGNYDEENMKSTVVPFRNGIMLSIAVGLAES 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+ I I D++ YPDCR + I+AI+ A G +V + P + K + K
Sbjct: 112 HGLKRIFIANHGGDHTIYPDCRPEFIQAIDNAAQAGTYENVRIEAPYTNITKADIVKRGS 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + E++ +CY G C C C R++ +
Sbjct: 172 ALG------IHYEDTWSCYKGGDIH-------CGKCGTCTERKEAF 204
>gi|168488522|ref|ZP_02712721.1| NADPH-dependent 7-cyano-7-deazaguanine reductase
(7-cyano-7-carbaguanine reductase) (preq(0) reductase)
(nadph-dependentnitrile oxidoreductase) [Streptococcus
pneumoniae SP195]
gi|237649171|ref|ZP_04523423.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae CCRI
1974]
gi|237820713|ref|ZP_04596558.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae CCRI
1974M2]
gi|183572727|gb|EDT93255.1| NADPH-dependent 7-cyano-7-deazaguanine reductase
(7-cyano-7-carbaguanine reductase) (preq(0) reductase)
(nadph-dependentnitrile oxidoreductase) [Streptococcus
pneumoniae SP195]
gi|332072592|gb|EGI83075.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
GA17570]
Length = 177
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHLEIQ----IAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|146303330|ref|YP_001190646.1| exsB protein [Metallosphaera sedula DSM 5348]
gi|145701580|gb|ABP94722.1| exsB protein [Metallosphaera sedula DSM 5348]
Length = 469
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 30/229 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++ SGG DS+ + + +V L F+Y +K E + R VRK +
Sbjct: 243 ALVIASGGLDSTVAATKMIREGYQVTLLHFNY--HHKAEEKEREAVRK----IASYLNAD 296
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNIIFLVFAATLAY 124
L E + +++G+ ++L K ++D + +VP RN IF A +A
Sbjct: 297 LMEINTDLFSLIGN---ATLLKGGGEIVKDRKGEEGAEFAHEWVPARNAIFFTVAMAIAE 353
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWK 182
G IV G+ + YPD + +R + + +G E V V P+ L K+E K
Sbjct: 354 AKGYDAIVSGINLEEAGAYPDNEMEFVRMFQRLSPYAVGPEKRVDVLMPVGNLVKHEIVK 413
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L +IG L + +CY G C C CY+R+ +
Sbjct: 414 LGLEIGAP------LHLTWSCYEGGEKH-------CGKCGPCYMRRVAF 449
>gi|302346706|ref|YP_003815004.1| protein ExsB [Prevotella melaninogenica ATCC 25845]
gi|302150631|gb|ADK96892.1| protein ExsB [Prevotella melaninogenica ATCC 25845]
Length = 218
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 93/230 (40%), Gaps = 38/230 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKIVELMPK 66
++++ SGG DS T L +D+ ET+ SFDYGQ + K +
Sbjct: 4 SVIIVSGGLDSITLL------YDKAETIALAISFDYGQNHGA----------KELPYAQY 47
Query: 67 WKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
+ LG HI +PL+ + SSL ++ N+ +T VP RN I L A
Sbjct: 48 HCEKLGIPHITIPLSFMHQYFKSSLLDGADAIPEGHYEEENMKSTVVPFRNGIMLAIATG 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + + I D++ YPDCR + I A+ A G V V P + K E
Sbjct: 108 IAESHELKRVYIANHGGDHTIYPDCRPEFIHAMNGATEAGTFVKVRVEAPYTEITKAEIV 167
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++ +CY G C C C R++ +
Sbjct: 168 ARGAALG------IDYSKTWSCYKGADIH-------CGKCGTCVERKEAF 204
>gi|294792739|ref|ZP_06757886.1| ExsB protein [Veillonella sp. 6_1_27]
gi|294456638|gb|EFG25001.1| ExsB protein [Veillonella sp. 6_1_27]
Length = 229
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCV------RKKIVE 62
A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + + + K ++
Sbjct: 7 AVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNMKGKTMD 66
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + S + L + DI S + + +T+VP RN +FL AA+L
Sbjct: 67 VTKLFAFS---NCSLLVQSSEDIPQGSYKEQ--QDAEGKGTVSTYVPFRNGLFLSAAASL 121
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A L I G D +G YPDC +++ AI G ++ P + K +
Sbjct: 122 ALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINANKADI 181
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + N+ + +CY G DK C C C R K +
Sbjct: 182 VKEGLRL------NVPYHLTWSCYEGG-DKP------CGHCGTCIDRAKAF 219
>gi|313886018|ref|ZP_07819756.1| protein ExsB [Porphyromonas asaccharolytica PR426713P-I]
gi|312924548|gb|EFR35319.1| protein ExsB [Porphyromonas asaccharolytica PR426713P-I]
Length = 217
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 94/228 (41%), Gaps = 30/228 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++L+ SGG DS+T L R + + FDYG ++ L K I
Sbjct: 3 NSLIALSGGVDSTTLLYEY--REEVACAVGFDYGSKHNAR---ELAAAKAICR------- 50
Query: 70 SLGEDH-ILPLAILGDISHSSLT-KNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAY 124
LG + I+PLA +G+ S L M++ D N+ +T VP RN I L A LA
Sbjct: 51 ELGIPYLIIPLAFIGEYFRSDLLLSGGEMQLGDYSEENMRSTVVPFRNGIMLSILAGLAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ ++I D++ YPDCR + + AI G + V + P L K E
Sbjct: 111 SRDLQQVLIANHFGDHAIYPDCRESFVTPMGKAITAGTSNGVKLVAPYTTLTKAEIVARG 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + ++++CY G C C C R ++
Sbjct: 171 TRLG------VPYGKTYSCYQGGERH-------CGRCGTCRERHDAFV 205
>gi|149006573|ref|ZP_01830272.1| hypothetical protein CGSSp18BS74_02251 [Streptococcus pneumoniae
SP18-BS74]
gi|225859532|ref|YP_002741042.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae 70585]
gi|225861579|ref|YP_002743088.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298254878|ref|ZP_06978464.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298503504|ref|YP_003725444.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae TCH8431/19A]
gi|147761871|gb|EDK68834.1| hypothetical protein CGSSp18BS74_02251 [Streptococcus pneumoniae
SP18-BS74]
gi|225721293|gb|ACO17147.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae 70585]
gi|225727586|gb|ACO23437.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae Taiwan19F-14]
gi|298239099|gb|ADI70230.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae TCH8431/19A]
gi|327389943|gb|EGE88288.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
GA04375]
gi|332072931|gb|EGI83412.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
GA17545]
gi|332200321|gb|EGJ14394.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
GA47368]
Length = 177
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQ + +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQHHHLEIQ----IAREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|254474583|ref|ZP_05087969.1| exsB protein [Ruegeria sp. R11]
gi|214028826|gb|EEB69661.1| exsB protein [Ruegeria sp. R11]
Length = 232
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 39/231 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE----C--RLCVRKKIVELMP 65
L++ SGG DS + + +SFDYGQR++ EL+ C RL V +I+++
Sbjct: 4 LVICSGGLDSVSLAHVLAAQGQLSRLVSFDYGQRHRKELDYAAACGQRLGVPHEIIDMR- 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
+I +S S+LT ++ + + + T VP RN I L A +
Sbjct: 63 --------------SIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGI 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYET 180
A G T + V D+ YPDCR A + + ++ + V++ TP + K +
Sbjct: 109 AAAKGDTAVATAVHGGDHFIYPDCRPAFTDAFDAMQRMALDGYADVSLVTPFVHRSKGDI 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ VN E+ +CY G + C C C R++ +
Sbjct: 169 ------VAAGAAVNTPFAETWSCYKGGE-------HHCGRCGTCVERREAF 206
>gi|227828356|ref|YP_002830136.1| exsB protein [Sulfolobus islandicus M.14.25]
gi|229585586|ref|YP_002844088.1| exsB protein [Sulfolobus islandicus M.16.27]
gi|238620549|ref|YP_002915375.1| exsB protein [Sulfolobus islandicus M.16.4]
gi|227460152|gb|ACP38838.1| exsB protein [Sulfolobus islandicus M.14.25]
gi|228020636|gb|ACP56043.1| exsB protein [Sulfolobus islandicus M.16.27]
gi|238381619|gb|ACR42707.1| exsB protein [Sulfolobus islandicus M.16.4]
gi|323478152|gb|ADX83390.1| exsB protein [Sulfolobus islandicus HVE10/4]
Length = 464
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 40/239 (16%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K L++ SGG DS+ + L V + F+Y +K E R VRK
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEREREAVRK------- 289
Query: 66 KWKDSLGEDHILPLA-----ILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNII 114
+ E +PL + I H++L K ++D + +VP RN+I
Sbjct: 290 -----IAEHLQVPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLI 344
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPL 172
F A +A G I G+ + YPD + IR + + G V V P+
Sbjct: 345 FFSAALAIAEAYGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPV 404
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K+E KL +IG L + +CY G + C C CY+R+ +
Sbjct: 405 GNLVKHEIVKLGYEIGAP------LHLTWSCYEGGQKH-------CGKCGPCYMRRVAF 450
>gi|229579998|ref|YP_002838398.1| exsB protein [Sulfolobus islandicus Y.G.57.14]
gi|229581341|ref|YP_002839740.1| exsB protein [Sulfolobus islandicus Y.N.15.51]
gi|284998612|ref|YP_003420380.1| exsB protein [Sulfolobus islandicus L.D.8.5]
gi|228010714|gb|ACP46476.1| exsB protein [Sulfolobus islandicus Y.G.57.14]
gi|228012057|gb|ACP47818.1| exsB protein [Sulfolobus islandicus Y.N.15.51]
gi|284446508|gb|ADB88010.1| exsB protein [Sulfolobus islandicus L.D.8.5]
Length = 464
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 40/239 (16%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K L++ SGG DS+ + L V + F+Y +K E R VRK
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEREREAVRK------- 289
Query: 66 KWKDSLGEDHILPLA-----ILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNII 114
+ E +PL + I H++L K ++D + +VP RN+I
Sbjct: 290 -----IAEHLQVPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLI 344
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPL 172
F A +A G I G+ + YPD + IR + + G V V P+
Sbjct: 345 FFSAALAIAEAYGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPV 404
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K+E KL +IG L + +CY G + C C CY+R+ +
Sbjct: 405 GNLVKHEIVKLGYEIGAP------LHLTWSCYEGGQKH-------CGKCGPCYMRRVAF 450
>gi|149002066|ref|ZP_01827020.1| hypothetical protein CGSSp14BS69_10156 [Streptococcus pneumoniae
SP14-BS69]
gi|149020842|ref|ZP_01835371.1| hypothetical protein CGSSp23BS72_02354 [Streptococcus pneumoniae
SP23-BS72]
gi|147759875|gb|EDK66865.1| hypothetical protein CGSSp14BS69_10156 [Streptococcus pneumoniae
SP14-BS69]
gi|147930483|gb|EDK81466.1| hypothetical protein CGSSp23BS72_02354 [Streptococcus pneumoniae
SP23-BS72]
Length = 177
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWDMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|325969442|ref|YP_004245634.1| exsB protein [Vulcanisaeta moutnovskia 768-28]
gi|323708645|gb|ADY02132.1| exsB protein [Vulcanisaeta moutnovskia 768-28]
Length = 495
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 25/222 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS+T ++ L + V L F+YG R + + E R R +P ++ ++
Sbjct: 255 LVIASGGLDSTTAATYLLKQGYDVALLHFNYGHRAETQ-EDRAIKRIAEFHNVPLFEVNM 313
Query: 72 GEDHIL---PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
I+ PL G+I+ + A + +VP RN +F+ A +A G
Sbjct: 314 DFFKIVRHSPLLGDGEINRVDEGREGA------EFAHEWVPARNFVFIALATAIAEAYGY 367
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQD 186
I G+ + YPD + IR + + +G HV + P+ L K+E +L +
Sbjct: 368 DYIATGINLEESGAYPDNEMEFIRLLNRVMPYAVGPNKHVELIMPVGHLVKHEIVRLGLE 427
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
V+ L + +CY C C CY+R+
Sbjct: 428 ------VDAPLHLTWSCYDNGEKH-------CGRCGPCYMRR 456
>gi|168483299|ref|ZP_02708251.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC1873-00]
gi|221232515|ref|YP_002511668.1| hypothetical protein SPN23F_17880 [Streptococcus pneumoniae ATCC
700669]
gi|172043242|gb|EDT51288.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC1873-00]
gi|220674976|emb|CAR69553.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
700669]
Length = 177
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS TCL W + ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQSALVVFSGGQDSKTCLFWTMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|282849824|ref|ZP_06259208.1| protein ExsB [Veillonella parvula ATCC 17745]
gi|282580761|gb|EFB86160.1| protein ExsB [Veillonella parvula ATCC 17745]
Length = 229
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCV------RKKIVE 62
A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + + + K ++
Sbjct: 7 AVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNMKGKTMD 66
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + S + L + DI S + + +T+VP RN +FL AA+L
Sbjct: 67 VTKLFAFS---NCSLLVQSSEDIPQGSYKEQ--QDAEGKGTVSTYVPFRNGLFLSAAASL 121
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A L I G D +G YPDC +++ AI G ++ P + K +
Sbjct: 122 ALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINSNKADI 181
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K +G + + +CY G DK C C C R K +
Sbjct: 182 VKEGLRLG------VPYHLTWSCYEGG-DKP------CGHCGTCIDRAKAF 219
>gi|163746922|ref|ZP_02154279.1| ExsB [Oceanibulbus indolifex HEL-45]
gi|161380036|gb|EDQ04448.1| ExsB [Oceanibulbus indolifex HEL-45]
Length = 233
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS + +SFDYGQR++ E++ K++
Sbjct: 4 LVICSGGLDSVSLAHITAVEHQLTRLVSFDYGQRHRKEVDFAEAAAKRLGVPF------- 56
Query: 72 GEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + +G +S S+LT ++ + ++ + T VP RN I L +A G
Sbjct: 57 ---HLIDMRGIGAALSGSALTDDIDVPDGHYAEDTMKITVVPNRNAIMLSIGFGIAAAQG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR + RA + ++ + V +HTP + K E +
Sbjct: 114 DEAVATAVHGGDHFIYPDCRPEFTRAFDAMQQAALDGYAQVRLHTPFVEQSKAEIVRQGA 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 174 QHG------TPFAETWSCYKGGE-------VHCGRCGTCVERREAF 206
>gi|171185720|ref|YP_001794639.1| ExsB family protein [Thermoproteus neutrophilus V24Sta]
gi|170934932|gb|ACB40193.1| ExsB family protein [Thermoproteus neutrophilus V24Sta]
Length = 275
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ ++K A+ + SGG DS+ S L R V LSF YGQ+ VE+E + +KI
Sbjct: 3 VRPAVEKPCRAVAVVSGGPDSTCYASLWLRRGCDVHALSFLYGQKAAVEVEKAQVLLRKI 62
Query: 61 VELMPK--WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
EL W + E ++ L+ LG + + + A+ ++ P VP RN++
Sbjct: 63 DELAAARGWGRVV-EHRVVDLSALGSLWRGTQLTDAALAVEKEYTPTVVVPIRNVVMAAV 121
Query: 119 AATLAYRL-----GITNIVIGVCETDYSG--------YPDCRHDTIRAIETAI---NLGM 162
A AY + T +V G D YPDC + + A++TA +
Sbjct: 122 ATAYAYTIRSATGAKTYVVYGAHYDDVKPRKDTWEPLYPDCSPECVEALQTAFRICHFRA 181
Query: 163 ESHVTVHTPLM-WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSC 221
E V + TP LKK + K+ + G ++ E+ +CY C C
Sbjct: 182 ERDVEIWTPSREGLKKSQLLKMCHEEIGD-----LIYETWSCYKSGEAH-------CGEC 229
Query: 222 PACYLRQKGWME 233
+C R +ME
Sbjct: 230 ESCRNRHAAFME 241
>gi|260430380|ref|ZP_05784353.1| ExsB protein [Citreicella sp. SE45]
gi|260418409|gb|EEX11666.1| ExsB protein [Citreicella sp. SE45]
Length = 233
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS + D+ +SFDYGQR++ EL+ +++ +P
Sbjct: 4 LVICSGGLDSVSLAHIIADQHRLTRLVSFDYGQRHRKELDFAAAAARRLN--VPH----- 56
Query: 72 GEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + +G +S S+LT ++ + + + T VP RN I L +A G
Sbjct: 57 ---HLIDMRGIGASLSGSALTDDIDVPDGHYAEETMRITVVPNRNAIMLAIGFGVAAANG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV--HTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR +A + ++ + +V HTP + K + +
Sbjct: 114 DEAVATAVHGGDHFIYPDCRPAFTQAFDAMQQAALDGYASVRLHTPFVERSKADIVRAGA 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 174 AHG------TPFAETWSCYKGGE-------VHCGRCGTCVERREAF 206
>gi|303236575|ref|ZP_07323157.1| protein ExsB [Prevotella disiens FB035-09AN]
gi|302483228|gb|EFL46241.1| protein ExsB [Prevotella disiens FB035-09AN]
Length = 217
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 38/232 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMPKW 67
++++ SGG DS T L + +SFDYGQ + ++ C R
Sbjct: 4 SIIIVSGGLDSITLLHQKANTI--ALAISFDYGQNHASKELPFAALHCKR---------- 51
Query: 68 KDSLGEDHI-LPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAAT 121
LG HI +PL + + SSL + + KI +++N+ +T VP RN I L AA
Sbjct: 52 ---LGIRHIVIPLQFMHEYFKSSLLEG-SEKIPEGHYEEDNMKSTVVPFRNGIMLAIAAG 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + I I D++ YPDCR + I A+ A G ++ + + K +
Sbjct: 108 IAESHHLNRIYIANHGGDHTIYPDCRPEFIDAMTAATQAGTFNNTRIEAAFTNITKADIV 167
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +G + E+ +CY +D + C C C R++ + +
Sbjct: 168 SIGTKLG------IDYAETWSCY---KDGNHH----CGKCGTCVERKEAFQQ 206
>gi|16120215|ref|NP_395803.1| succinoglycan biosynthesis [Halobacterium sp. NRC-1]
gi|169237475|ref|YP_001690679.1| hypothetical protein OE5195R [Halobacterium salinarum R1]
gi|74568513|sp|Q9HHN8|QUEC_HALSA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|10584341|gb|AAG20938.1| succinoglycan biosynthesis [Halobacterium sp. NRC-1]
gi|167728702|emb|CAP15546.1| hypothetical protein OE5195R [Halobacterium salinarum R1]
Length = 229
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 27/237 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A A++L SGG DS+T + A + V L YGQ + E + C + L
Sbjct: 2 SAKRAVVLASGGMDSATAAAVAHNAGYEVYMLHTSYGQ--QTEHKEHECATAQAAALGAA 59
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L DH L I SSLT + ++ + +P ++VP RN L A +
Sbjct: 60 DFLHLTTDH------LSKIGASSLTDDEMAVADADMESDEIPTSYVPFRNANLLAMATSY 113
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
A + IG D+SGYPDC+ A + + G ++ ++++ P + K +
Sbjct: 114 AEANDCEAVFIGAHSEDFSGYPDCQPAFFEAFQQTVAAGTKPDTEISINAPFVDWSKTDI 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++G + E + +CY + C +C AC R + + E+
Sbjct: 174 AERGLELG------VPYEHTWSCYRAE-------APACGTCDACAFRLQAFQNLGER 217
>gi|161527552|ref|YP_001581378.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
gi|160338853|gb|ABX11940.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
Length = 224
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGG DS +S+ +++ + ++F YGQ+ +E+ KK+
Sbjct: 4 AVVVFSGGVDSVCAVSFLKSKYE-LYGITFSYGQKANMEISATKSFAKKL---------G 53
Query: 71 LGEDHILPLAILGDI-SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L + I+ + + ++ S++ + KI + VP RN +FL A+ AY L +
Sbjct: 54 LKQHKIIDIGFMKELYGDSNVLTSSKRKIPSKFEYSIVVPIRNAVFLSVASAWAYTLNAS 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
+V G D YPDCR + +E+A N G
Sbjct: 114 LVVYGAHTGD-KYYPDCRPAFAKKLESAFNQG 144
>gi|268324681|emb|CBH38269.1| conserved hypothetical protein, ExsB family [uncultured archaeon]
Length = 274
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 32/237 (13%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K +A+ + SGG DS+ + A + + YGQR + K++VE +
Sbjct: 32 KMTKTAVCVCSGGIDSTVTATIASEEGYELHFFHASYGQRAEAR-------EKEVVEEIA 84
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDN-----NLPNTFVPGRNIIFLV 117
+ ++ E L L ++ SSLT ++V + + N P+T+VP RNII L
Sbjct: 85 SYLNA-KELKFAELPFLKELGGSSLTDKARSVPVGKEVNLDAEKETPSTWVPCRNIILLA 143
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV---TVHTPLMW 174
A+ A + I +G + YPD + + + + S+ V PL+
Sbjct: 144 NASAFAEVISADAIFVGFNAEEARSYPDNEKEFVDRYNAVLEKAVASYCRPPIVKAPLVD 203
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K E K ++ L+ +++CYLG++ C C +C R++G+
Sbjct: 204 LLKQEIIKKGVEVKAP------LQLTYSCYLGEKKH-------CGICESCQHRRRGF 247
>gi|190893557|ref|YP_001980099.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CIAT 652]
gi|254764371|sp|B3Q0Y0|QUEC_RHIE6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|190698836|gb|ACE92921.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CIAT 652]
Length = 236
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 92/229 (40%), Gaps = 35/229 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVELMP 65
+++ SGG DS + + +SFDYGQR++ EL+ RL V I+++
Sbjct: 4 IVVCSGGLDSVSLAHKMAAEQQLIGLVSFDYGQRHRKELDFAARCAARLAVPHHIIDIA- 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
AI G +S S+LT NV + + + T VP RN I L A L
Sbjct: 63 --------------AIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGL 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + + V D+ YPDCR I A + N ++ + +V L Y
Sbjct: 109 AAAQKADAVAVAVHGGDHFIYPDCRPGFIDAFQRMQNAALDGYASVR----LLAPYVDVS 164
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A + + E+ +CY G R C C C R++ +
Sbjct: 165 KAAIVADGEKHATPFAETWSCYKGGR-------LHCGRCGTCVERREAF 206
>gi|15903645|ref|NP_359195.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae R6]
gi|15459271|gb|AAL00406.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
Length = 190
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQ + +E++ + ++I
Sbjct: 15 KHQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQHHHLEIQ----ITREIA----- 65
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 66 -KEQGIRHHILDMSLLGQIT 84
>gi|148990489|ref|ZP_01821630.1| hypothetical protein CGSSp6BS73_12431 [Streptococcus pneumoniae
SP6-BS73]
gi|147924247|gb|EDK75343.1| hypothetical protein CGSSp6BS73_12431 [Streptococcus pneumoniae
SP6-BS73]
gi|301794749|emb|CBW37202.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
Length = 177
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQ + +E++ + ++I
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQHHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|20094501|ref|NP_614348.1| PP-loop superfamily ATPase [Methanopyrus kandleri AV19]
gi|74559880|sp|Q8TWG9|QUEC_METKA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|19887606|gb|AAM02278.1| Predicted PP-loop superfamily ATPase [Methanopyrus kandleri AV19]
Length = 229
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ ++L SGG DSS WA++ RV L DYGQRN E R ++I E +
Sbjct: 3 TTVVLCSGGLDSSVIAKWAVEELGGRVICLFVDYGQRN-APFERR--AAERIAEAVGAEF 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+++G + L + L + + +L ++P RN L AA L L +
Sbjct: 60 ETVGTFWLRRLCPDNPMFAGRLPREAGTE----DLSANWLPARNWNLLGVAAALCDHLYL 115
Query: 129 T------NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+IV G+ + +PD + A+ A+ G+ S +H+PL L K +
Sbjct: 116 EGEDDEFHIVWGINAEEAERFPDNTKEFADAVAEALKRGLPSRPRLHSPLAELYKPGIVR 175
Query: 183 LAQDIGGQDLVNLILEESHTCY--LGKRDKRYEWGYGCNSCPACYLRQKGW 231
L ++G +E S +CY + + D C C ACY R++ +
Sbjct: 176 LGSELGAP------MELSVSCYNPIWEDDTPVH----CGECEACYHRKRAF 216
>gi|329766237|ref|ZP_08257795.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137296|gb|EGG41574.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 224
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 41/237 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGG DS +S ++D + +SF YGQ+ E+ KK+
Sbjct: 4 AVIVFSGGIDSVCMVSHLKSKYD-LYGISFSYGQKANREINSAKAFAKKL---------G 53
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF-----VPGRNIIFLVFAATLAYR 125
L + I+ + + ++ S NV + +P+ F VP RN +FL A+ AY
Sbjct: 54 LKQHKIINIGFMKELYGDS---NV-LTSSKRKIPSAFDYSIVVPIRNAVFLSIASAWAYT 109
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL--------GMESHVTVHTPLM-WLK 176
L + + G D YPDCR + +E+A NL G+ ++ + +P +
Sbjct: 110 LNASLVAYGAHTGD-KHYPDCRPIFTKKLESAFNLGEIDGINSGLRKNIQIWSPYREGIS 168
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + K+ G +++ + ++ +CY K+ + C C +C R+ + +
Sbjct: 169 KSDLLKI-----GFKMLDDSIFKTWSCYSNKK-------FHCGVCESCNNRKTAFQK 213
>gi|15896988|ref|NP_341593.1| transcription regulator (exsB) related protein [Sulfolobus
solfataricus P2]
gi|284173860|ref|ZP_06387829.1| transcription regulator (exsB) related protein [Sulfolobus
solfataricus 98/2]
gi|74543016|sp|Q981C9|QUEC_SULSO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|13813145|gb|AAK40383.1| Transcription regulator (exsB) related protein [Sulfolobus
solfataricus P2]
gi|261601641|gb|ACX91244.1| exsB protein [Sulfolobus solfataricus 98/2]
Length = 464
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 30/234 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K L++ SGG DS+ + L V + F+Y +K E + R VRK I E +
Sbjct: 239 RKKYRVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEKEREAVRK-IAEYLQ 295
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNIIFLVFA 119
+ D + I H++L K ++D + +VP RN+IF +
Sbjct: 296 IPLLEINTD------LFKIIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSVS 349
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKK 177
+A G I G+ + YPD + IR + + G + + P+ L K
Sbjct: 350 LAIAEAYGYDAIASGINLEEAGAYPDNEMEFIRMLNKLSPYATGPNKRIEILMPVGNLVK 409
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+E KL +IG L + +CY G + C C CY+R+ +
Sbjct: 410 HEIVKLGYEIGAP------LHLTWSCYEGGQKH-------CGKCGPCYMRKMAF 450
>gi|227831113|ref|YP_002832893.1| exsB protein [Sulfolobus islandicus L.S.2.15]
gi|227457561|gb|ACP36248.1| exsB protein [Sulfolobus islandicus L.S.2.15]
Length = 464
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 94/239 (39%), Gaps = 40/239 (16%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K L++ SGG DS+ + L V + F+Y +K E R VR
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEREREAVR-------- 288
Query: 66 KWKDSLGEDHILPLA-----ILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNII 114
++ E +PL + I H++L K ++D + +VP RN+I
Sbjct: 289 ----NIAEHLQVPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLI 344
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPL 172
F A +A G I G+ + YPD + IR + + G V V P+
Sbjct: 345 FFSAALAIAEAYGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPV 404
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K+E KL +IG L + +CY G + C C CY+R+ +
Sbjct: 405 GNLVKHEIVKLGYEIGAP------LHLTWSCYEGGQKH-------CGKCGPCYMRRVAF 450
>gi|261880515|ref|ZP_06006942.1| transcription regulator ExsB [Prevotella bergensis DSM 17361]
gi|270332737|gb|EFA43523.1| transcription regulator ExsB [Prevotella bergensis DSM 17361]
Length = 242
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 94/228 (41%), Gaps = 42/228 (18%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV------ELECRLCVRKKIVELM 64
A+++ SGG DS T L DR LSFDYG + E+ C+
Sbjct: 28 AIIIVSGGMDSITMLYEFQDRI--ALGLSFDYGSNHNAREIPYAEMHCK----------- 74
Query: 65 PKWKDSLGEDHIL-PLAILGDISHSSLTKNV-AMKIQDNN---LPNTFVPGRNIIFLVFA 119
LG HI+ PL + SSL + A+ D N + +T VP RN I L A
Sbjct: 75 -----RLGIPHIIIPLDFMSRYFKSSLLEGADAIPEGDYNEVGMKSTVVPFRNGIMLSIA 129
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A +A + I++ D+ YPDCR + IRA+ A G + + P + K +
Sbjct: 130 AGMAESQNLKYIMMANHSGDHIIYPDCRPEFIRAMSKATQTGTFPGIKILAPYTDITKGD 189
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ +G L E+ +CY G +R+ C C C R
Sbjct: 190 IACRGKALG------LDYTETWSCYKG--GERH-----CGKCGTCLER 224
>gi|298675033|ref|YP_003726783.1| exsB protein [Methanohalobium evestigatum Z-7303]
gi|298288021|gb|ADI73987.1| exsB protein [Methanohalobium evestigatum Z-7303]
Length = 235
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 33/237 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLC----VRKKIVEL 63
A+ L S G DS L+ A + D + FDYGQR+ ++E ++C + ++++L
Sbjct: 3 AISLLSSGLDSVAALTIAREITDVKLAIIFDYGQRSAKKEIEYSKKICTHFGIDYEVIKL 62
Query: 64 MPKWKDSLGEDHIL------PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
W + + ++ P L D+S KN K +++ N +VP RN IFL
Sbjct: 63 --DWLEKITNTSLVNKKEDVPELTLDDVSG----KNATEKTEES-AKNVWVPNRNGIFLN 115
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
+A A L +++G + +PD + + ++ T ++ + V + PL+ K
Sbjct: 116 ISAGFAESLECEYVIVGFNSEEGQTFPDNSPEFVDSMNTCLSYSTRNGVKILAPLVDYNK 175
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ A G LE S +CY G+ C C +C R+ + E
Sbjct: 176 KDIINQALKSGTP------LEWSWSCYHGR-------DLPCGVCESCIRRKHAFNEL 219
>gi|111656750|ref|ZP_01407633.1| hypothetical protein SpneT_02001957 [Streptococcus pneumoniae
TIGR4]
gi|225855206|ref|YP_002736718.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae JJA]
gi|225723556|gb|ACO19409.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae JJA]
Length = 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 10/80 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K AL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + ++I
Sbjct: 2 KRQLALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHLEIQ----ITREIA----- 52
Query: 67 WKDSLGEDHILPLAILGDIS 86
K+ HIL +++LG I+
Sbjct: 53 -KEQGIRHHILDMSLLGQIT 71
>gi|327310688|ref|YP_004337585.1| exsB protein [Thermoproteus uzoniensis 768-20]
gi|326947167|gb|AEA12273.1| exsB protein [Thermoproteus uzoniensis 768-20]
Length = 496
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 33/227 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-------KIVEL 63
AL++ SGG DS+T + L + V L F+Y R+ E R VR+ ++E+
Sbjct: 254 ALVVASGGLDSTTAAAALLRQGYEVALLHFNY--RHVAEDPERRAVREISKALGTPLIEV 311
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G PL G+I+ V M + + +VP RN +F+ A LA
Sbjct: 312 DMDFFKLAGRS---PLLGEGEINR------VDMGREGAEFAHEWVPARNFVFIALAVALA 362
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETW 181
G + +G+ + YPD + +R + A+ G + V + P+ L K+E
Sbjct: 363 EAWGYDYVALGINMEEAGAYPDNEMELVRLLNQALPYATGPQRRVQLLMPVGGLVKHEIV 422
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
+L ++G L + +CY DK + C C CY+R+
Sbjct: 423 RLGLEVGAP------LHLTWSCY----DKGPK---HCGRCGPCYMRR 456
>gi|218263752|ref|ZP_03477748.1| hypothetical protein PRABACTJOHN_03438 [Parabacteroides johnsonii
DSM 18315]
gi|218222534|gb|EEC95184.1| hypothetical protein PRABACTJOHN_03438 [Parabacteroides johnsonii
DSM 18315]
Length = 73
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE 51
+K +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E
Sbjct: 1 MKHQEAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIE 47
>gi|163738315|ref|ZP_02145730.1| ExsB [Phaeobacter gallaeciensis BS107]
gi|161388236|gb|EDQ12590.1| ExsB [Phaeobacter gallaeciensis BS107]
Length = 232
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE----C--RLCVRKKIVELMP 65
L++ SGG DS + + +SFDYGQR++ EL+ C RL V +I+++
Sbjct: 4 LVICSGGLDSVSLAHVLAAKGQLSRLVSFDYGQRHRKELDYAAACGQRLGVPHEIIDMR- 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
+I +S S+LT ++ + + + T VP RN I L A +
Sbjct: 63 --------------SIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGI 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYET 180
A G T + V D+ YPDCR A + + ++ + V + TP + K +
Sbjct: 109 AAAKGDTAVATAVHGGDHFIYPDCRPAFTDAFDVMQRMALDGYADVALVTPFVHRSKGDI 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ V E+ +CY G + C C C R++ +
Sbjct: 169 ------VAAGAAVKTPFAETWSCYKGGE-------HHCGRCGTCVERREAF 206
>gi|294675227|ref|YP_003575843.1| protein ExsB [Prevotella ruminicola 23]
gi|294471644|gb|ADE81033.1| protein ExsB [Prevotella ruminicola 23]
Length = 217
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++++ SGG DS+T L D +R+ +SFDYG + K + +
Sbjct: 4 SIIILSGGMDSTTLL---YDYQERIALAISFDYGSNHNA----------KEIPFAKYHCE 50
Query: 70 SLGEDH-ILPLAILGDISHSSL-TKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H ++PL +G+ SSL + + A+ N+ +T VP RN I L A +A
Sbjct: 51 QLGIKHLVIPLKFMGEYFRSSLLSGDEAIPEGHYASENMKSTVVPFRNGIMLAVATGMAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ +++ D++ YPDCR + + A + G + V + +P + K +
Sbjct: 111 SNDLQYVMMANHGGDHTIYPDCRPEFVDAFDKTAQAGTFNGVRLLSPYCNMTKGQIAARG 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+++G + ++ +CY G DK C C C R++
Sbjct: 171 KELG------IDYSKTWSCYRGG-DKH------CGKCGTCVERKE 202
>gi|260892492|ref|YP_003238589.1| exsB protein [Ammonifex degensii KC4]
gi|260864633|gb|ACX51739.1| exsB protein [Ammonifex degensii KC4]
Length = 219
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 29/237 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-------ELECRLCVRKKIVEL 63
+++L SGG DS+ CL+ A++ + V +L+FDYGQ +L V +++ L
Sbjct: 3 SVVLLSGGLDSAVCLACAVEDGEVVLSLTFDYGQAAAKKEIEAASKLSRHYGVPHQVLHL 62
Query: 64 MPKWKDSLGEDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAAT 121
P ++ +LP A+ G+ T+ + K+ + L + +VP RN +FL A
Sbjct: 63 -PFLRE------LLPPAMASGEGMPEPETRELDDKVSADKLARSVWVPNRNALFLSIGAA 115
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A LG +V G + +PD + A+ + V V + L K
Sbjct: 116 FAESLGAEAVVAGFNAEEAQSFPDNSPPFVDAMNEVLRYSTRGKVRVISYTQRLDKKAIV 175
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+L + +G L +CY + C CP+C + E +E++
Sbjct: 176 RLGKRLG------LPFPFIWSCYRAGEEM-------CGRCPSCLRYFRALREAEEEW 219
>gi|327189841|gb|EGE56979.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CNPAF512]
Length = 236
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 92/229 (40%), Gaps = 35/229 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVELMP 65
+++ SGG DS + + +SFDYGQR++ EL+ RL V I+++
Sbjct: 4 IVVCSGGLDSVSLAHKMAAEQQLIGLVSFDYGQRHRKELDFAARCAARLAVPHHIIDIA- 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
AI G +S S+LT NV + + + T VP RN I L A L
Sbjct: 63 --------------AIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGL 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + + V D+ YPDCR I A + N ++ + +V L Y
Sbjct: 109 AAAQKADAVAVAVHGGDHFIYPDCRPGFIDAFQCMQNEALDGYASVR----LLAPYVDVS 164
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A + + E+ +CY G R C C C R++ +
Sbjct: 165 KAAIVADGEKHATPFAETWSCYKGGR-------LHCGRCGTCVERREAF 206
>gi|116253991|ref|YP_769829.1| transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841]
gi|110816252|sp|Q1MBE0|QUEC_RHIL3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|115258639|emb|CAK09743.1| putative transcriptional regulator [Rhizobium leguminosarum bv.
viciae 3841]
Length = 236
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 90/229 (39%), Gaps = 35/229 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVELMP 65
+++ SGG DS T + +SFDYGQR++ EL+ RL V I+++
Sbjct: 4 IVVCSGGLDSVTLAHKVAAEQQLIGLVSFDYGQRHRKELDFAARCASRLSVPHHIIDIA- 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I G +S S+LT NV + + + T VP RN I L A L
Sbjct: 63 --------------GIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGL 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + + V D+ YPDCR I A + N +E + +V L Y
Sbjct: 109 AAAQKADAVAVAVHGGDHFIYPDCRPGFIEAFQRMQNEALEGYASV----KLLAPYVDVS 164
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A + + E+ +CY G C C C R++ +
Sbjct: 165 KAAIVVDGEKHGTPFSETWSCYKGGEPH-------CGRCGTCVERREAF 206
>gi|118431467|ref|NP_147964.2| hypothetical protein APE_1470.1 [Aeropyrum pernix K1]
gi|150421640|sp|Q9YBY0|QUEC_AERPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|116062792|dbj|BAA80468.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 269
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 41/245 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK--WK 68
A+ + SGG DS T L R V LSF+YGQ+ E+ + +K EL + W
Sbjct: 6 AVSIVSGGPDSFTYTLIWLSRGCSVHALSFNYGQKASREVLTARKLLEKADELASERGWG 65
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
L E ++ ++ + + + + ++++++ P+ VP RN++ L AA AY L
Sbjct: 66 RVL-EHRLVDISFMKSLWRGTQLTDEEVEVKEDYAPSVVVPIRNVVMLSIAAAYAYSLLE 124
Query: 127 --GITNIVIGVC----------ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
+ +V+ +T YPDC + I A++ A L
Sbjct: 125 EEDVDRVVVTYGAQRGDIKPRPDTGEPLYPDCSPECIEALQAAFRL---------CHFRG 175
Query: 175 LKKYETWKLAQD-IGGQDL-------VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
+++ E W +++ + DL V ++ ++ +CYL + Y C C +C
Sbjct: 176 MRRLEVWSPSREGLSKSDLLKWAYGTVGKLIYDTWSCYLNGK-------YHCGRCESCIN 228
Query: 227 RQKGW 231
R + +
Sbjct: 229 RHRAF 233
>gi|238018562|ref|ZP_04598988.1| hypothetical protein VEIDISOL_00389 [Veillonella dispar ATCC 17748]
gi|237865033|gb|EEP66323.1| hypothetical protein VEIDISOL_00389 [Veillonella dispar ATCC 17748]
Length = 234
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
D++ + A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE
Sbjct: 3 GDLMAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELE----AAAS 58
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNII 114
I+ ++ + + ++ S+ + + + +T+VP RN +
Sbjct: 59 ILAYYGIEGKTMDVTKLFAFSNCSLLTQSTEAIPQGSYKEQQETEGEGTVSTYVPFRNGL 118
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPL 172
FL AA+LA L I G D +G YPDC +++ AI G ++ P
Sbjct: 119 FLSAAASLALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPF 178
Query: 173 MWLKKYETWKLAQDIG 188
+ K + K +G
Sbjct: 179 INHNKADVVKEGLRLG 194
>gi|303231219|ref|ZP_07317957.1| protein ExsB [Veillonella atypica ACS-049-V-Sch6]
gi|302514126|gb|EFL56130.1| protein ExsB [Veillonella atypica ACS-049-V-Sch6]
Length = 229
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+TCL+ A++RF + V LS YGQ++ ELE V
Sbjct: 7 AVVLFSGGVDSTTCLALAIERFGKENVVPLSIQYGQKHSKELEAAANVLSYYGI------ 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKI--------QDNNLP---NTFVPGRNIIFLV 117
E + + L S+SSL K + QD + +T+VP RN +FL
Sbjct: 61 ----EGKTMDVTKLFAFSNSSLLKQSTEDVPTGSYKEQQDEHGEGPVSTYVPFRNGLFLS 116
Query: 118 FAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
AA+LA L I G D +G YPDC ++ AI G ++ P +
Sbjct: 117 AAASLALSLDCGYIYYGAHADDAAGNAYPDCTETFYTSMGNAIFEGSGKECSLEAPFINR 176
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + + +G + E + +CY G + C C C RQ+ +
Sbjct: 177 NKADVVREGLRLG------VPYELTWSCYEGGD-------HPCGHCGTCIDRQEAF 219
>gi|259418809|ref|ZP_05742726.1| ExsB protein [Silicibacter sp. TrichCH4B]
gi|259345031|gb|EEW56885.1| ExsB protein [Silicibacter sp. TrichCH4B]
Length = 233
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS + + +SFDYGQR++ E++ K++
Sbjct: 4 LVICSGGLDSVSLAHITANEHQLTRLVSFDYGQRHRKEVDFAEAAAKRLGVPF------- 56
Query: 72 GEDHILPL-AILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + I G ++ S+LT ++ + + + T VP RN I L +A G
Sbjct: 57 ---HLIDMRGIGGALTGSALTDDIDVPDGHYAEETMKITVVPNRNAIMLSIGFGIAAAQG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR RA + +E + V +HTP + K E +
Sbjct: 114 DAAVATAVHGGDHFIYPDCRPGFTRAFDAMQRAALEGYADVRLHTPFVEHSKAEIVRQGA 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G + C C C R++ +
Sbjct: 174 QHG------TPFAETWSCYKGG-------AFHCGRCGTCVERREAF 206
>gi|227498705|ref|ZP_03928849.1| archaeosine biosynthesis protein queC [Acidaminococcus sp. D21]
gi|226904161|gb|EEH90079.1| archaeosine biosynthesis protein queC [Acidaminococcus sp. D21]
Length = 233
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 33/235 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVEL--MPK 66
AL+L SGG DS+TC+S A+ R V T+S YGQ+++ EL+ +K+ + +P
Sbjct: 5 ALVLSSGGVDSTTCVSVAVHELGRENVATVSIFYGQKHRKELD----AAQKVADFYHVPH 60
Query: 67 WKDSLGEDHILPLAILGDISHSS---LTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAAT 121
++ L + I + +SHS+ + ++ +I N +T+VP RN + L A+
Sbjct: 61 YELDLSK--IFQYSNCSLLSHSTEEIIHESYEDQIAQNGEGKVSTYVPFRNGLMLSAVAS 118
Query: 122 LAYRL---GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
LA L +I +G D +G Y DC A+ AI++G + P + +
Sbjct: 119 LAMSLFEKDDVDIYLGAHADDAAGNAYADCSEAFTDAMGKAISIGTYEQCHLVAPFVEVN 178
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K K ++G E + +CY G C +C C R + +
Sbjct: 179 KAGIVKKGLELG------TPYELTWSCYEGGDRP-------CGTCGTCIDRARAF 220
>gi|303229849|ref|ZP_07316626.1| protein ExsB [Veillonella atypica ACS-134-V-Col7a]
gi|302515479|gb|EFL57444.1| protein ExsB [Veillonella atypica ACS-134-V-Col7a]
Length = 229
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+TCL+ A++RF + V LS YGQ++ ELE V
Sbjct: 7 AVVLFSGGVDSTTCLALAIERFGKENVVPLSIQYGQKHSKELEAAANVLSYYGI------ 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKI--------QDNNLP---NTFVPGRNIIFLV 117
E + + L S+SSL K + QD + +T+VP RN +FL
Sbjct: 61 ----EGKTMDVTKLFAFSNSSLLKQSTEDVPTGSYKEQQDEHGEGPVSTYVPFRNGLFLS 116
Query: 118 FAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
AA+LA L I G D +G YPDC ++ AI G ++ P +
Sbjct: 117 AAASLALSLDCGYIYYGAHADDAAGNAYPDCTETFYTSMGNAIFEGSGKECSLEAPFINR 176
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + + +G + E + +CY G + C C C RQ+ +
Sbjct: 177 NKADVVREGLRLG------VPYELTWSCYEGGD-------HPCGHCGTCIDRQEAF 219
>gi|254467069|ref|ZP_05080480.1| exsB protein [Rhodobacterales bacterium Y4I]
gi|206687977|gb|EDZ48459.1| exsB protein [Rhodobacterales bacterium Y4I]
Length = 233
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 89/225 (39%), Gaps = 27/225 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++ SGG DS + + +SFDYGQR++ EL+ K++ +
Sbjct: 4 IVICSGGLDSVSLAHMVAEEHQLTRLVSFDYGQRHRKELDYAAAAAKRL---------GV 54
Query: 72 GEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D I I +S S+LT ++ + + + T VP RN I L A +A G
Sbjct: 55 PHDIIDMRGIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGIAAANGD 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQD 186
+ V D+ YPDCR A + ++ + V ++TP + K +
Sbjct: 115 DAVATAVHGGDHFIYPDCRPAFTEAFDAMQRAALDGYADVRLYTPFVHRTKGDI------ 168
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ N E+ +CY G C C C R++ +
Sbjct: 169 VTAGAKHNTPFAETWSCYKGGEKH-------CGRCGTCVERREAF 206
>gi|70606119|ref|YP_254989.1| hypothetical protein Saci_0280 [Sulfolobus acidocaldarius DSM 639]
gi|110816268|sp|Q4JBY3|QUEC_SULAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|68566767|gb|AAY79696.1| conserved protein [Sulfolobus acidocaldarius DSM 639]
Length = 462
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 31/229 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS+ ++ + + V L F+Y +K E + R VRK I E + +
Sbjct: 243 LVVASGGLDSTVAATYLVRQGHEVTLLHFNY--HHKAEEKEREAVRK-ISEYLNVPFVEI 299
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKI-------QDNNLPNTFVPGRNIIFLVFAATLAY 124
D + + HS+L K + +I + + +VP RN+IF A +A
Sbjct: 300 DTD------LFKIVGHSTLIKGSSGEIVKDRKGEEGAEFAHEWVPARNLIFFSVALAMAE 353
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWK 182
G I G+ + YPD + +R + +G V V P+ L K+E K
Sbjct: 354 AYGFDAIASGINLEEAGAYPDNEMEFVRMFSRLVPYAVGPNKKVEVLMPVGNLVKHEIVK 413
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L I L + +CY G C C CY+R+ +
Sbjct: 414 LGVQIDAP------LHLTWSCYEGGNKH-------CGKCGPCYMRKVAF 449
>gi|213418073|ref|ZP_03351147.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 85
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 159 NLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
NLGM + TPLMW+ K ETW LA D GQ ++L+ EE+ TCY G + G GC
Sbjct: 1 NLGMAKDIRFETPLMWIDKAETWALA-DYWGQ--LDLVREETLTCYNGIK------GDGC 51
Query: 219 NSCPACYLRQKG 230
C AC LR G
Sbjct: 52 GHCAACNLRANG 63
>gi|332299348|ref|YP_004441269.1| exsB protein [Porphyromonas asaccharolytica DSM 20707]
gi|332176411|gb|AEE12101.1| exsB protein [Porphyromonas asaccharolytica DSM 20707]
Length = 217
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 30/228 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWK 68
++L+ SGG DS+T L R + + FDYG + N EL + +++ +P
Sbjct: 3 NSLIAHSGGVDSTTLLYEY--REEVACAVGFDYGSKHNARELAAAKAICRELD--IPYL- 57
Query: 69 DSLGEDHILPLAILGDISHSSLT-KNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAY 124
I+PLA + + S L M++ D N+ +T VP RN I L A LA
Sbjct: 58 -------IIPLAFIEEYFRSDLLLSGGEMQLGDYSEENMRSTVVPFRNGIMLSVLAGLAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ ++I D++ YPDCR ++ + AI G + V + P L K E
Sbjct: 111 SRDLQQVLIANHFGDHAIYPDCRESFVKPMGEAITAGTSNGVKLVAPYTALTKAEIVARG 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + ++++CY G C C C R ++
Sbjct: 171 TRLG------VPYGKTYSCYQGGERH-------CGRCGTCRERHDAFV 205
>gi|227820050|ref|YP_002824021.1| succinoglycan biosynthesis regulator [Sinorhizobium fredii NGR234]
gi|75440536|sp|Q6W2G5|QUEC_RHISN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|36958584|gb|AAQ87052.1| Succinoglycan biosynthesis regulator, ExsB [Sinorhizobium fredii
NGR234]
gi|227339049|gb|ACP23268.1| succinoglycan biosynthesis regulator [Sinorhizobium fredii NGR234]
Length = 236
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 31/227 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++ SGG DS + + + LSFDYGQR++ EL+ K+ L
Sbjct: 4 IVICSGGLDSVSLAHRIAAEHELLGLLSFDYGQRHRKELDFAAACAKR-----------L 52
Query: 72 GEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
G H I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 53 GVPHQIIDIREIGRHLTGSALTDDVDVPDGHYAEETMKTTVVPNRNAIMLAIAFGVAATR 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLA 184
+ V D+ YPDCR I A + N +E + V ++TP + + K A
Sbjct: 113 KADAVAAAVHGGDHFIYPDCRPGFIDAFQVMQNHALEGYADVILYTPYVNVSK------A 166
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + E+ +CY G C C C R++ +
Sbjct: 167 DIVADGAKHHTPFAETWSCYKGGTRH-------CGRCGTCVERREAF 206
>gi|163742268|ref|ZP_02149656.1| hypothetical protein RG210_03618 [Phaeobacter gallaeciensis 2.10]
gi|161384598|gb|EDQ08979.1| hypothetical protein RG210_03618 [Phaeobacter gallaeciensis 2.10]
Length = 232
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE----C--RLCVRKKIVELMP 65
L++ SGG DS + + +SFDYGQR++ EL+ C RL V +I+++
Sbjct: 4 LVICSGGLDSVSLAHVLAAKGQLSRLVSFDYGQRHRKELDYAAACGQRLGVPHEIIDMR- 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
+I +S S+LT ++ + + + T VP RN I L A +
Sbjct: 63 --------------SIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGI 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYET 180
A G T + V D+ YPDCR A + + ++ + V + TP + K +
Sbjct: 109 AAAKGDTAVATAVHGGDHFIYPDCRPAFTDAFDVMQRMALDGYADVALVTPFVHRSKGDI 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ V E+ +CY G + C C C R++ +
Sbjct: 169 ------VTAGAAVKTPFAETWSCYKGG-------AHHCGRCGTCVERREAF 206
>gi|86136123|ref|ZP_01054702.1| ExsB [Roseobacter sp. MED193]
gi|85826997|gb|EAQ47193.1| ExsB [Roseobacter sp. MED193]
Length = 233
Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS + + +SFDYGQR++ E+ K++
Sbjct: 4 LVICSGGLDSVSLAHITANEHQLTRLVSFDYGQRHRKEIYFAEAAAKRLGVPF------- 56
Query: 72 GEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + +G ++ S+LT ++ + ++ + T VP RN I L +A G
Sbjct: 57 ---HLIDMRGVGASLTGSALTDDIDVPDGHYEEETMRATVVPNRNAIMLSIGFGIAAAKG 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR RA + ++ + V +HTP + K E +
Sbjct: 114 DEAVATAVHGGDHFIYPDCRPSFTRAFDAMQQAALDGYAEVRLHTPFVEHSKAEIVRQGA 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++ +CY G + C C C R++ +
Sbjct: 174 KH------DTPFAQTWSCYKGNK-------VHCGRCGTCVERREAF 206
>gi|330835407|ref|YP_004410135.1| exsB protein [Metallosphaera cuprina Ar-4]
gi|329567546|gb|AEB95651.1| exsB protein [Metallosphaera cuprina Ar-4]
Length = 462
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 32/230 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-------KIVEL 63
AL++ SGG DS+ + + +V L F+Y +K E R RK ++E+
Sbjct: 243 ALVIASGGLDSTVAATKMVKDGYQVTLLHFNY--HHKAEEREREATRKIASYLNVDLIEV 300
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+GE +L G+I + A + +VP RN IF A +A
Sbjct: 301 NTDVFTLIGESPLLKAG--GEIVKERKGEEGA------EFAHEWVPARNSIFFTVAMAIA 352
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETW 181
G +V G+ + YPD + +R + + +G V + P+ L K+E
Sbjct: 353 EARGYDTLVSGINLEEAGAYPDNEMEFVRMFQRLSPYAVGPNKRVDIVMPVGNLVKHEIV 412
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
KL DIG L + +CY G C C CY+R+ +
Sbjct: 413 KLGLDIGAP------LHLTWSCYEGGEKH-------CGRCGPCYMRKTAF 449
>gi|23502820|ref|NP_698947.1| exsB protein [Brucella suis 1330]
gi|161619890|ref|YP_001593777.1| exsB protein [Brucella canis ATCC 23365]
gi|254704980|ref|ZP_05166808.1| exsB protein [Brucella suis bv. 3 str. 686]
gi|260567546|ref|ZP_05838016.1| queuosine biosynthesis protein queC [Brucella suis bv. 4 str. 40]
gi|261755681|ref|ZP_05999390.1| queuosine biosynthesis protein queC [Brucella suis bv. 3 str. 686]
gi|81751945|sp|Q8FYB3|QUEC_BRUSU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189038898|sp|A9M959|QUEC_BRUC2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|23348844|gb|AAN30862.1| exsB protein [Brucella suis 1330]
gi|161336701|gb|ABX63006.1| exsB protein [Brucella canis ATCC 23365]
gi|260157064|gb|EEW92144.1| queuosine biosynthesis protein queC [Brucella suis bv. 4 str. 40]
gi|261745434|gb|EEY33360.1| queuosine biosynthesis protein queC [Brucella suis bv. 3 str. 686]
Length = 232
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + + LSFDYGQR+K EL+ + C ++
Sbjct: 4 LVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKR------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT +V + + + T VP RN I LV A +A
Sbjct: 52 LGVPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLVIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ + V D+ YPDCR I A +T ++ + V L Y A
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADV----KLLAPYVHATKAD 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G D+ C C C R++ +
Sbjct: 168 IVADGAKYRTPFEATWSCYKGA-DRH------CGRCGTCVERREAF 206
>gi|126458827|ref|YP_001055105.1| ExsB family protein [Pyrobaculum calidifontis JCM 11548]
gi|126248548|gb|ABO07639.1| ExsB family protein [Pyrobaculum calidifontis JCM 11548]
Length = 270
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK--WK 68
A+ + SGG DS+ + + R V LSF YGQ+ VE+E V K++ EL K W
Sbjct: 6 AVAVVSGGPDSTCYTALWMKRGCDVHALSFLYGQKGAVEVEKAQAVLKRLDELAAKRGWG 65
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ L+ LG++ + + + ++ P VP RN++ A AY L
Sbjct: 66 RVV-EHKVVDLSSLGELWRGTQLTDAGVAVEREYAPTVVVPIRNVVMAAVATAYAYTLRA 124
Query: 129 TN-----IVIGVCETDYSG--------YPDCRHDTIRAIETAINLGM---ESHVTVHTPL 172
+ +++G D YPDC + A++ A + E V + TP
Sbjct: 125 VSGAKVYVILGSHYDDIRPREDTWEPLYPDCSPECFEALQAAFRICHFRGERDVELWTPS 184
Query: 173 M-WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+K + KL D ++ NL+ E+ +CYL C C +C R + +
Sbjct: 185 REGLRKSQLLKLCYD----EVGNLVY-ETWSCYLSDEAH-------CGRCESCRNRHRAF 232
Query: 232 ME 233
+E
Sbjct: 233 LE 234
>gi|86359301|ref|YP_471193.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CFN 42]
gi|110816251|sp|Q2K3X0|QUEC_RHIEC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|86283403|gb|ABC92466.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CFN 42]
Length = 236
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 90/229 (39%), Gaps = 35/229 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVELMP 65
+++ SGG DS + + +SFDYGQR++ EL+ RL V I+++
Sbjct: 4 IVVCSGGLDSVSLAHRTASEEQLIGLVSFDYGQRHRKELDFAAKCAARLAVPHHIIDIA- 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
AI G +S S+LT NV + + + T VP RN I L A L
Sbjct: 63 --------------AIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGL 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + + V D+ YPDCR I A + N ++ + +V L Y
Sbjct: 109 AAAQKADAVAVAVHGGDHFIYPDCRPGFIDAFQRMQNEALDGYASV----KLLAPYVEVS 164
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A + E+ +CY G C C C R++ +
Sbjct: 165 KAAIVADGTRHGTPFAETWSCYKGGS-------LHCGRCGTCVERREAF 206
>gi|315608141|ref|ZP_07883133.1| transcription regulator ExsB [Prevotella buccae ATCC 33574]
gi|315250110|gb|EFU30107.1| transcription regulator ExsB [Prevotella buccae ATCC 33574]
Length = 217
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 46/236 (19%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKV------ELEC-RLCVRKKIVE 62
+ ++ SGG DS T L D+ D + +SFDYG + ++ C RL ++ ++
Sbjct: 4 SAIIVSGGMDSITLL---YDKKDEIALGISFDYGSNHNAREIPFAQMHCERLGIKHIVIN 60
Query: 63 L--MPKW-KDSL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
L M ++ K SL G D I P + +N+ +T VP RN I L
Sbjct: 61 LDFMHRYFKSSLLDGADAI-PEG----------------HYEADNMKSTVVPFRNGIMLS 103
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A +A + ++I D++ YPDCR + I AI+ A G +V V P + K
Sbjct: 104 IAIGIAESHNLKKVLIANHGGDHTIYPDCRPEFIHAIDKAARYGTFINVGVSAPYTDITK 163
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + +G + E+ +CY G C C C R++ E
Sbjct: 164 GQIASIGKRLG------IDYRETWSCYKGGV-------VHCGKCGTCIERKEALAE 206
>gi|288925099|ref|ZP_06419035.1| ExsB protein [Prevotella buccae D17]
gi|288338289|gb|EFC76639.1| ExsB protein [Prevotella buccae D17]
Length = 217
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 46/236 (19%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKV------ELEC-RLCVRKKIVE 62
+ ++ SGG DS T L D+ D + +SFDYG + ++ C RL ++ ++
Sbjct: 4 SAIIVSGGMDSITLL---YDKKDEIALGISFDYGSNHNAREIPFAQMHCERLGIKHIVIN 60
Query: 63 L--MPKW-KDSL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
L M ++ K SL G D I P + +N+ +T VP RN I L
Sbjct: 61 LDFMHRYFKSSLLDGADAI-PEG----------------HYEADNMKSTVVPFRNGIMLS 103
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A +A + ++I D++ YPDCR + I AI+ A G +V V P + K
Sbjct: 104 IAIGIAESHNLKKVLIANHGGDHTIYPDCRPEFIHAIDKAARYGTFINVGVSAPYTDITK 163
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + +G + E+ +CY G C C C R++ E
Sbjct: 164 GQIASIGKRLG------IDYRETWSCYKGGV-------VHCGKCGTCIERKEALAE 206
>gi|118577065|ref|YP_876808.1| PP-loop superfamily ATPase [Cenarchaeum symbiosum A]
gi|118195586|gb|ABK78504.1| PP-loop superfamily ATPase [Cenarchaeum symbiosum A]
Length = 223
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 35/234 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGG DS C+ L + R+ ++F YGQR + E ++ E+
Sbjct: 3 AVVVFSGGIDS-LCMCAHLRKKYRLYGITFLYGQRARRESR----AARRCAEIA-----G 52
Query: 71 LGEDHILPLAILGDI-SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L E + +GD+ S++ + +I + + VP RN +FL AA AY +G
Sbjct: 53 LKEHRTAKMEFMGDLYGGSNVLTDSRRRIPASFEGSIVVPVRNAVFLSVAAAWAYSIGAA 112
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP---LMW------LKKYET 180
+ G D YPDCR + +E+A+NLG + T +W L K +
Sbjct: 113 LVAYGAHTGD-GNYPDCRPAFAKRMESALNLGEADAINKGTRKALYIWSPYREGLSKADL 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYL-GKRDKRYEWGYGCNSCPACYLRQKGWME 233
K D G ++ ++ +CY GK+ C C +C R+ + +
Sbjct: 172 LKTGHDAFGDEIF-----QAWSCYADGKKH--------CGKCESCSNRKAAFAK 212
>gi|159041826|ref|YP_001541078.1| exsB protein [Caldivirga maquilingensis IC-167]
gi|157920661|gb|ABW02088.1| exsB protein [Caldivirga maquilingensis IC-167]
Length = 502
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K L++ SGG DS+T + + + V L F+YG + E + ++I E +
Sbjct: 251 KPRRVLVVASGGLDSTTSATQLIKQGYDVTLLHFNYGHVAEGPEENAV---RRIAEFL-- 305
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK-----IQDNNLPNTFVPGRNIIFLVFAAT 121
L E ++ I + HS L + + I + +VP RN++F+ A
Sbjct: 306 -NVPLLEVNMDFFKI---VKHSPLLGDGEINRRREGITGAEFAHEWVPARNLVFIALAVA 361
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYE 179
+A +G + GV + YPD + IR + + +G HV + P+ L K+E
Sbjct: 362 IAEAMGYDYVATGVNLEEAGAYPDNEMEFIRLLNQVMPYAVGPNKHVELLMPVGHLVKHE 421
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
KL +IG L + +CY DK + C C C++R+
Sbjct: 422 IVKLGLEIGAP------LHLTWSCY----DKGPK---HCGRCGPCFMRR 457
>gi|297619989|ref|YP_003708094.1| exsB protein [Methanococcus voltae A3]
gi|297378966|gb|ADI37121.1| exsB protein [Methanococcus voltae A3]
Length = 234
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 30/235 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ A + + L+F+YGQ+ L+ + KKI E+
Sbjct: 3 AICVLSGGLDSTVASLIAKQKGYDITCLTFNYGQQ---ALKNEISASKKIAEI------- 52
Query: 71 LGEDH-ILPLAILGD---ISHSSLTKNVAMKIQDNNLPN----------TFVPGRNIIFL 116
LG +H I+ L L + +S L I + NL N +VP RN+I
Sbjct: 53 LGAEHKIIDLNFLSEMCELSECGLKTGDIPSISEENLDNRVVAEQTMKKVWVPARNLIMF 112
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
A+ LA + + G+ E + S +PD + + G + V + PL +
Sbjct: 113 SIASGLAEAICADYVYCGINEEEASTFPDNTMEFMDRFNKCNEYGTLNKVKLEAPLYKMN 172
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K E K ++ Q L +L+ S++CY + E+ + C C +C R++ +
Sbjct: 173 KDEIVKKGIEL-EQKLGLELLKYSYSCY----HENPEFIH-CGICESCMRRKRAF 221
>gi|149203606|ref|ZP_01880575.1| hypothetical protein RTM1035_06058 [Roseovarius sp. TM1035]
gi|149142723|gb|EDM30765.1| hypothetical protein RTM1035_06058 [Roseovarius sp. TM1035]
Length = 232
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 39/231 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE----C--RLCVRKKIVELMP 65
+++ SGG DS + + LSFDYGQR+ E+E C RL V K+V++
Sbjct: 4 IVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHVKEVEYAAACARRLGVPHKVVDIRQ 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I +S S+LT +VA+ + + T VP RN I L A +
Sbjct: 64 ---------------IGAALSGSALTDDVAVPDGHYAEETMKITIVPNRNAIMLAIAFGM 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYET 180
A + V D+ YPDCR I A + + +E + V ++TP + K +
Sbjct: 109 AAAEKADAVATAVHGGDHFIYPDCRPGFINAFQAMQDAALEGYAEVKLYTPYLQGSKGDI 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 169 VTDGAKHG------TPFAETWSCYKGGAKH-------CGRCGTCVERREAF 206
>gi|254512926|ref|ZP_05124992.1| exsB protein [Rhodobacteraceae bacterium KLH11]
gi|221532925|gb|EEE35920.1| exsB protein [Rhodobacteraceae bacterium KLH11]
Length = 232
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 47/234 (20%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVELMPK 66
L+ SGG DS + ++ D +SFDYGQR+ EL+ RL V +++L
Sbjct: 5 LVCSGGLDSVSLAHVLANQGDLSRLVSFDYGQRHTKELDFAAACATRLGVPHHVIDLR-- 62
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ ++ S+LT ++ + ++ + T VP RN I L T+A
Sbjct: 63 -------------SVGATLTGSALTDDLDVPDGHYEEETMKVTVVPNRNAIML----TIA 105
Query: 124 YRLGITN----IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKK 177
Y + N + V D+ YPDCR D A + ++ + V +H P + K
Sbjct: 106 YGIAAANKDDAVATAVHGGDHFIYPDCRPDFTDAFDAMQRAALDGYAEVALHVPFVHRAK 165
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A + VN +++ +CY G C C C R++ +
Sbjct: 166 ------ADIVTEGARVNTPFDQTWSCYKGG-------DLHCGRCGTCVERREAF 206
>gi|18313078|ref|NP_559745.1| hypothetical protein PAE2074 [Pyrobaculum aerophilum str. IM2]
gi|74563624|sp|Q8ZVX7|QUEC_PYRAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|18160584|gb|AAL63927.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 269
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 30/248 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVE 62
I++K + + SGG DS+ + L R V LSF YGQ+ VE+E +L +R+
Sbjct: 2 IVEKPCRVVAVVSGGPDSTCYTALWLKRGCDVHALSFLYGQKAVVEVERAQLLLRRLDGI 61
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + E ++ L+ LG++ + + ++ ++ + P VP RN++ A
Sbjct: 62 AAERGWGRVVEHRVVDLSSLGELWRGTQLTDPSVSVEQSYTPTVVVPIRNVVMAAVATAY 121
Query: 123 AYRLG-----ITNIVIGVCETDYSG--------YPDCRHDTIRAIETAINLGM---ESHV 166
AY +G T +++G D YPDC + + A++TA + E V
Sbjct: 122 AYTVGRNAGAKTYVILGSHYDDIKPREDTWEPLYPDCSPECVEAMQTAFRICHFRGERGV 181
Query: 167 TVHTPLM-WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
+ TP L+K + K+ Q++ +LI ++ +CY C SC +C
Sbjct: 182 EIWTPSREGLRKSQLLKMCH----QEVGDLIY-DTWSCYKSGEAH-------CGSCESCK 229
Query: 226 LRQKGWME 233
R ++E
Sbjct: 230 NRHAAFIE 237
>gi|85707172|ref|ZP_01038259.1| hypothetical protein ROS217_16351 [Roseovarius sp. 217]
gi|85668331|gb|EAQ23205.1| hypothetical protein ROS217_16351 [Roseovarius sp. 217]
Length = 232
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 39/231 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE----C--RLCVRKKIVELMP 65
+++ SGG DS + + LSFDYGQR+ E+E C RL V K+V++
Sbjct: 4 IVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHVKEVEYAAACARRLGVPHKVVDIRQ 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I +S S+LT +VA+ + + T VP RN I L A +
Sbjct: 64 ---------------IGAALSGSALTDDVAVPDGHYAEETMKITIVPNRNAIMLAIAFGM 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYET 180
A + V D+ YPDCR I A + + +E + V ++TP + K +
Sbjct: 109 AAAEKADAVATAVHGGDHFIYPDCRPGFINAFQAMQDAALEGYAEVKLYTPYLQGSKGDI 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 169 VTDGAKHG------TPFAETWSCYKGGARH-------CGRCGTCVERREAF 206
>gi|20804216|emb|CAD31242.1| HYPOTHETICAL CONSERVED PROTEIN [Mesorhizobium loti R7A]
Length = 232
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 33/230 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+AL++ SGG DS + + LSFDYGQR+K EL +C ++
Sbjct: 2 NALVICSGGLDSVSLAHKVATEQKLIGLLSFDYGQRHKKELGFAAICAKR---------- 51
Query: 69 DSLGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG H I+ + +G ++S S+LT NV + ++++ T VP RN I L A +A
Sbjct: 52 --LGVPHQIVDIRDVGRNLSGSALTDNVDVPDGHYAEDSMRITVVPNRNAIMLAIAFGVA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETW 181
+ V D+ YPDCR I A +T N + + + ++ P + + K +
Sbjct: 110 AAQKADAVATAVHGGDHFIYPDCRPAFIDAFQTMQNHALAGYADIRLYAPYVNMSKADIV 169
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G C C C R++ +
Sbjct: 170 SEGAKYATP------FEATWSCYKGGARH-------CGRCGTCVERREAF 206
>gi|209551069|ref|YP_002282986.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|254764372|sp|B5ZR38|QUEC_RHILW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|209536825|gb|ACI56760.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 236
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 35/229 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVELMP 65
+++ SGG DS + + +SFDYGQR++ EL+ RL V I+++
Sbjct: 4 IVVCSGGLDSVSLAHKIAAEQQLIGLVSFDYGQRHRKELDFAARCAARLAVPHHIIDIS- 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
AI G +S S+LT ++ + + + T VP RN I L A L
Sbjct: 63 --------------AIGGHLSGSALTDDIEVPDGHYAEETMKATVVPNRNAIMLAIAFGL 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + + V D+ YPDCR I A + N ++ + +V L Y
Sbjct: 109 AAAQKADAVAVAVHGGDHFIYPDCRPGFIDAFQRMQNEALDGYASVR----LLAPYVEVS 164
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A + + E+ +CY G R C C C R++ +
Sbjct: 165 KAAIVTDGEKHATPFAETWSCYKGGR-------LHCGRCGTCVERREAF 206
>gi|269215411|ref|ZP_06159265.1| ExsB protein [Slackia exigua ATCC 700122]
gi|269130898|gb|EEZ61973.1| ExsB protein [Slackia exigua ATCC 700122]
Length = 268
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 24/178 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKK------IVE 62
AL+L SGG DS+TCL+ A++RF V T+SF YGQR++ EL+ V ++ +++
Sbjct: 34 ALVLSSGGIDSTTCLALAVERFSTANVSTVSFFYGQRHRKELDAAQAVAERYGVAHYVLD 93
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLT--KNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + S D+ L D++ + K+ A + PNT+VP RN + L AA
Sbjct: 94 IASVLRYS---DNALMAGSTQDVARGTYADQKDAAGR------PNTYVPFRNGLMLSAAA 144
Query: 121 TLAY-----RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
LA + + YPDC A+ A+ +G +VT+ P +
Sbjct: 145 ALAASLYPDEACAVYLGAHADDAAGDAYPDCSPAFTDAMSDAMRIGTYGNVTLEAPFV 202
>gi|294496221|ref|YP_003542714.1| exsB protein [Methanohalophilus mahii DSM 5219]
gi|292667220|gb|ADE37069.1| exsB protein [Methanohalophilus mahii DSM 5219]
Length = 228
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 28/238 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLC----VRKKIVEL 63
A+ L S G DS L+ A ++D L+FDYGQ +++ ++C + +++ L
Sbjct: 5 AVCLLSSGLDSLASLAIASAKYDVQIGLTFDYGQLAADAEIDHSRQICAHYGIPHRVISL 64
Query: 64 MPKW-KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
W KD + L D++ + L K ++ + N +VP RN + AA+
Sbjct: 65 --DWMKDITTTSLVNRQGCLPDMAGADLGKR---EVTSESAANVWVPNRNGLMANIAASF 119
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A LG IV G + + +PD + + I A + + V + +P++ + K K
Sbjct: 120 AEALGCGYIVAGFNAEEAATFPDNSPEFVDCINRAFSYSTLNGVRLISPVLEMDKVAIVK 179
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A + Q + L S +CY GK C C +C R + + K QD
Sbjct: 180 EA--VRAQAPLGL----SWSCYQGKEKP-------CGLCESCVRRARAFQ--KAGVQD 222
>gi|126737389|ref|ZP_01753124.1| ExsB [Roseobacter sp. SK209-2-6]
gi|126721974|gb|EBA18677.1| ExsB [Roseobacter sp. SK209-2-6]
Length = 215
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 27/199 (13%)
Query: 38 LSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM- 96
+SFDYGQR++ EL+ +++ + D I +I ++ S+LT ++ +
Sbjct: 12 VSFDYGQRHRKELDYAAAAAERL---------GVPHDIIDMRSIGASLTGSALTDDIDVP 62
Query: 97 --KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI 154
++ ++ T VP RN I L A +A G + V D+ YPDCR + A
Sbjct: 63 DGHYEEESMKVTVVPNRNAIMLTIAYGIAAANGDEAVATAVHGGDHFIYPDCRPEFTEAF 122
Query: 155 ETAINLGMESH--VTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
+ ++ + V ++TP + K A + N E+ +CY G +
Sbjct: 123 DAMQRAALDGYADVQLYTPFVHRSK------ADIVTAGAKHNTPFAETWSCYKGGEHQ-- 174
Query: 213 EWGYGCNSCPACYLRQKGW 231
C C C R++ +
Sbjct: 175 -----CGRCGTCVERREAF 188
>gi|17986379|ref|NP_539013.1| succinoglycan biosynthesis regulator [Brucella melitensis bv. 1
str. 16M]
gi|62290820|ref|YP_222613.1| exsB protein [Brucella abortus bv. 1 str. 9-941]
gi|82700732|ref|YP_415306.1| ExsB protein [Brucella melitensis biovar Abortus 2308]
gi|148559755|ref|YP_001259789.1| exsB protein [Brucella ovis ATCC 25840]
gi|163843994|ref|YP_001628398.1| exsB protein [Brucella suis ATCC 23445]
gi|189025039|ref|YP_001935807.1| ExsB protein [Brucella abortus S19]
gi|225628171|ref|ZP_03786206.1| exsB protein [Brucella ceti str. Cudo]
gi|225853408|ref|YP_002733641.1| ExsB protein [Brucella melitensis ATCC 23457]
gi|237816334|ref|ZP_04595327.1| exsB protein [Brucella abortus str. 2308 A]
gi|254690110|ref|ZP_05153364.1| exsB protein [Brucella abortus bv. 6 str. 870]
gi|254694600|ref|ZP_05156428.1| exsB protein [Brucella abortus bv. 3 str. Tulya]
gi|254696225|ref|ZP_05158053.1| exsB protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254700610|ref|ZP_05162438.1| exsB protein [Brucella suis bv. 5 str. 513]
gi|254707505|ref|ZP_05169333.1| exsB protein [Brucella pinnipedialis M163/99/10]
gi|254708955|ref|ZP_05170766.1| exsB protein [Brucella pinnipedialis B2/94]
gi|254731143|ref|ZP_05189721.1| exsB protein [Brucella abortus bv. 4 str. 292]
gi|256030482|ref|ZP_05444096.1| exsB protein [Brucella pinnipedialis M292/94/1]
gi|256112300|ref|ZP_05453221.1| exsB protein [Brucella melitensis bv. 3 str. Ether]
gi|256158468|ref|ZP_05456366.1| exsB protein [Brucella ceti M490/95/1]
gi|256253887|ref|ZP_05459423.1| exsB protein [Brucella ceti B1/94]
gi|256258364|ref|ZP_05463900.1| exsB protein [Brucella abortus bv. 9 str. C68]
gi|256263112|ref|ZP_05465644.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 2 str.
63/9]
gi|256370374|ref|YP_003107885.1| queuosine biosynthesis protein QueC [Brucella microti CCM 4915]
gi|260169389|ref|ZP_05756200.1| queuosine biosynthesis protein QueC [Brucella sp. F5/99]
gi|260546087|ref|ZP_05821827.1| queuosine biosynthesis protein queC [Brucella abortus NCTC 8038]
gi|260562884|ref|ZP_05833370.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
16M]
gi|260755649|ref|ZP_05867997.1| queuosine biosynthesis protein queC [Brucella abortus bv. 6 str.
870]
gi|260758874|ref|ZP_05871222.1| queuosine biosynthesis protein queC [Brucella abortus bv. 4 str.
292]
gi|260760598|ref|ZP_05872941.1| queuosine biosynthesis protein queC [Brucella abortus bv. 2 str.
86/8/59]
gi|260884674|ref|ZP_05896288.1| queuosine biosynthesis protein queC [Brucella abortus bv. 9 str.
C68]
gi|261214924|ref|ZP_05929205.1| queuosine biosynthesis protein queC [Brucella abortus bv. 3 str.
Tulya]
gi|261221024|ref|ZP_05935305.1| queuosine biosynthesis protein queC [Brucella ceti B1/94]
gi|261314988|ref|ZP_05954185.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
M163/99/10]
gi|261316454|ref|ZP_05955651.1| queuosine biosynthesis protein queC [Brucella pinnipedialis B2/94]
gi|261751119|ref|ZP_05994828.1| queuosine biosynthesis protein queC [Brucella suis bv. 5 str. 513]
gi|261758911|ref|ZP_06002620.1| queuosine biosynthesis protein queC [Brucella sp. F5/99]
gi|265987524|ref|ZP_06100081.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
M292/94/1]
gi|265993733|ref|ZP_06106290.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 3 str.
Ether]
gi|265996984|ref|ZP_06109541.1| queuosine biosynthesis protein queC [Brucella ceti M490/95/1]
gi|297247206|ref|ZP_06930924.1| exsB protein [Brucella abortus bv. 5 str. B3196]
gi|75496157|sp|Q57AT2|QUEC_BRUAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81852586|sp|Q8YJI8|QUEC_BRUME RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816216|sp|Q2YR96|QUEC_BRUA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016411|sp|A5VSU2|QUEC_BRUO2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189038899|sp|B0CIX5|QUEC_BRUSI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764309|sp|B2S8M9|QUEC_BRUA1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764310|sp|C0RFL5|QUEC_BRUMB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|17981969|gb|AAL51277.1| succinoglycan biosynthesis regulator [Brucella melitensis bv. 1
str. 16M]
gi|62196952|gb|AAX75252.1| exsB protein [Brucella abortus bv. 1 str. 9-941]
gi|82616833|emb|CAJ11929.1| ExsB protein [Brucella melitensis biovar Abortus 2308]
gi|148371012|gb|ABQ60991.1| exsB protein [Brucella ovis ATCC 25840]
gi|163674717|gb|ABY38828.1| exsB protein [Brucella suis ATCC 23445]
gi|189020611|gb|ACD73333.1| ExsB protein [Brucella abortus S19]
gi|225616996|gb|EEH14043.1| exsB protein [Brucella ceti str. Cudo]
gi|225641773|gb|ACO01687.1| exsB protein [Brucella melitensis ATCC 23457]
gi|237788401|gb|EEP62616.1| exsB protein [Brucella abortus str. 2308 A]
gi|256000537|gb|ACU48936.1| queuosine biosynthesis protein QueC [Brucella microti CCM 4915]
gi|260096194|gb|EEW80070.1| queuosine biosynthesis protein queC [Brucella abortus NCTC 8038]
gi|260152900|gb|EEW87992.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
16M]
gi|260669192|gb|EEX56132.1| queuosine biosynthesis protein queC [Brucella abortus bv. 4 str.
292]
gi|260671030|gb|EEX57851.1| queuosine biosynthesis protein queC [Brucella abortus bv. 2 str.
86/8/59]
gi|260675757|gb|EEX62578.1| queuosine biosynthesis protein queC [Brucella abortus bv. 6 str.
870]
gi|260874202|gb|EEX81271.1| queuosine biosynthesis protein queC [Brucella abortus bv. 9 str.
C68]
gi|260916531|gb|EEX83392.1| queuosine biosynthesis protein queC [Brucella abortus bv. 3 str.
Tulya]
gi|260919608|gb|EEX86261.1| queuosine biosynthesis protein queC [Brucella ceti B1/94]
gi|261295677|gb|EEX99173.1| queuosine biosynthesis protein queC [Brucella pinnipedialis B2/94]
gi|261304014|gb|EEY07511.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
M163/99/10]
gi|261738895|gb|EEY26891.1| queuosine biosynthesis protein queC [Brucella sp. F5/99]
gi|261740872|gb|EEY28798.1| queuosine biosynthesis protein queC [Brucella suis bv. 5 str. 513]
gi|262551452|gb|EEZ07442.1| queuosine biosynthesis protein queC [Brucella ceti M490/95/1]
gi|262764714|gb|EEZ10635.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 3 str.
Ether]
gi|263093013|gb|EEZ17163.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 2 str.
63/9]
gi|264659721|gb|EEZ29982.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
M292/94/1]
gi|297174375|gb|EFH33722.1| exsB protein [Brucella abortus bv. 5 str. B3196]
gi|326409971|gb|ADZ67036.1| ExsB protein [Brucella melitensis M28]
gi|326539688|gb|ADZ87903.1| exsB protein [Brucella melitensis M5-90]
Length = 232
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + + LSFDYGQR+K EL+ + C ++
Sbjct: 4 LVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKR------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ + V D+ YPDCR I A +T ++ + V L Y A
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADV----KLLAPYVHATKAD 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G D+ C C C R++ +
Sbjct: 168 IVADGAKYRTPFEATWSCYKGA-DRH------CGRCGTCVERREAF 206
>gi|256059943|ref|ZP_05450128.1| exsB protein [Brucella neotomae 5K33]
gi|261323915|ref|ZP_05963112.1| queuosine biosynthesis protein queC [Brucella neotomae 5K33]
gi|261299895|gb|EEY03392.1| queuosine biosynthesis protein queC [Brucella neotomae 5K33]
Length = 232
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + + LSFDYGQR+K EL+ + C ++
Sbjct: 4 LVICSGGLDSVSLTHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKR------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ + V D+ YPDCR I A +T ++ + V L Y A
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADV----KLLAPYVHATKAD 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G D+ C C C R++ +
Sbjct: 168 IVADGAKYRTPFEATWSCYKGA-DRH------CGRCGTCVERREAF 206
>gi|241206474|ref|YP_002977570.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860364|gb|ACS58031.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 236
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+++ SGG DS T + +SFDYGQR++ EL+ C + V
Sbjct: 4 IVVCSGGLDSVTLAHKVAAEQQLIGLVSFDYGQRHRKELDFAARCASRLAVPY------- 56
Query: 71 LGEDHILPLA-ILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
HI+ +A I G +S S+LT NV + + + T VP RN I L A LA
Sbjct: 57 ----HIIDIASIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQ 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ + V D+ YPDCR I A + N ++ + V L Y A
Sbjct: 113 KADAVAVAVHGGDHFIYPDCRPGFIDAFQHMQNEALDGYANV----KLLAPYVDASKAAI 168
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + E+ +CY G C C C R++ +
Sbjct: 169 VVDGEKHGTPFSETWSCYKGGE-------LHCGRCGTCVERREAF 206
>gi|118592127|ref|ZP_01549521.1| ExsB protein [Stappia aggregata IAM 12614]
gi|118435423|gb|EAV42070.1| ExsB protein [Stappia aggregata IAM 12614]
Length = 219
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 20 DSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDSLGEDHIL- 77
DS T + + +SFDYGQR+K EL+ + C D L +HIL
Sbjct: 2 DSVTLAHKVAREHELIGLVSFDYGQRHKKELDYAKACA------------DELKTEHILI 49
Query: 78 PLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
++ +G ++ S+LT N+ + + + T VP RN I L A +A G +
Sbjct: 50 DISNIGRQLTGSALTDNLDVPDGHYAEETMKITVVPNRNAIMLSIAFGIASARGAEAVAT 109
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V D+ YPDCR + ET +E +++ TP + K DI +
Sbjct: 110 AVHGGDHFIYPDCRPAFTESFETMQRHALEGMGEISLFTPYVHTSK-------ADIAAEG 162
Query: 192 L-VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L + + ++ +CY G C C C R++ +
Sbjct: 163 LRLGVDYRKTWSCYKGGE-------VHCGRCGTCVERREAF 196
>gi|52549865|gb|AAU83714.1| transcriptional regulator [uncultured archaeon GZfos33E1]
Length = 231
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 34/233 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ + SGG DS+ + A + + YGQR + K++V + + ++
Sbjct: 5 AVCVCSGGIDSTVTATIASEEGYELHLFHASYGQRAEAR-------EKEVVAKLASYLNA 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNL---------PNTFVPGRNIIFLVFAAT 121
E L L ++ SSLT ++ +I P+T+VP RNII L A+
Sbjct: 58 -NELKFAELPFLKELGGSSLT-DLKRRIPTGEEVNLEEEKETPSTWVPCRNIILLANASA 115
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKY 178
A + I +G + YPD + + + + S+ V PL+ L K
Sbjct: 116 FAEVISADAIFVGFNAEEARSYPDNEKEFVDRYNAVLEKAVASYCPPPEVKAPLVDLLKP 175
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E K ++ L+ +++CYLG++ C C +C R++G+
Sbjct: 176 EIIKKGVEVKAP------LQLTYSCYLGEKKH-------CGICESCQHRRRGF 215
>gi|306843409|ref|ZP_07476010.1| exsB protein [Brucella sp. BO1]
gi|306276100|gb|EFM57800.1| exsB protein [Brucella sp. BO1]
Length = 232
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + + LSFDYGQR++ EL+ + C ++
Sbjct: 4 LVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHRKELDFAQACAKR------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ + V D+ YPDCR I A +T ++ + V L Y A
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADV----KLLAPYVHATKAD 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + E + +CY G D+ C C C R++ +
Sbjct: 168 IVADGAKYHTPFEATWSCYKGA-DRH------CGRCGTCVERREAF 206
>gi|83951569|ref|ZP_00960301.1| ExsB [Roseovarius nubinhibens ISM]
gi|83836575|gb|EAP75872.1| ExsB [Roseovarius nubinhibens ISM]
Length = 233
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS + +SFDYGQR++ EL+ + D L
Sbjct: 4 LVICSGGLDSVSLAHKVAAEQTLTRLVSFDYGQRHRKELD-----------FAARAADRL 52
Query: 72 GED-HILPLAILGDI-SHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
G H++ + +G + + S+LT +V + + ++ T VP RN I L A LA
Sbjct: 53 GVPFHLIDMRGIGAVLTGSALTDDVPVPDGHYTEASMAATVVPNRNAIMLSVAFGLATAQ 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV--HTPLMWLKK 177
G + V D+ YPDCR ++ + N ++ + V +TP + K
Sbjct: 113 GDEAVATAVHGGDHFIYPDCRPGFAKSFQAMQNHALDGYANVFLYTPFIDAPK 165
>gi|119873340|ref|YP_931347.1| ExsB family protein [Pyrobaculum islandicum DSM 4184]
gi|119674748|gb|ABL89004.1| ExsB family protein [Pyrobaculum islandicum DSM 4184]
Length = 276
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK--WK 68
A+ + SGG DS+ L R + LSF YGQ+ VE+E V +KI EL W
Sbjct: 13 AVAVVSGGPDSTCYAVLWLKRGCDIHALSFLYGQKASVEVEKAQLVLRKIDELAAARGWG 72
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
+ E ++ L+ LG++ + + ++ ++ P VP RN++ A AY +
Sbjct: 73 RVV-EHRVVNLSALGELWRGTQLTDSSLSVEREYTPTVVVPIRNVVMAAVATAYAYTIRN 131
Query: 127 ---GITNIVIGVCETDYSG--------YPDCRHDTIRAIETAI---NLGMESHVTVHTPL 172
T ++ G D YPDC + I A++TA + E V + TP
Sbjct: 132 FTGAKTYVIYGAHYDDIKPREDTWEPRYPDCSPECIEALQTAFRICHFRAERDVEIWTPS 191
Query: 173 M-WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
LKK + K+ Q++ +LI E+ +CY C C +C R +
Sbjct: 192 REGLKKSQLLKICH----QEVGDLIY-ETWSCYKSGEAH-------CGECESCRNRHAAF 239
Query: 232 ME 233
+E
Sbjct: 240 IE 241
>gi|260463747|ref|ZP_05811945.1| exsB protein [Mesorhizobium opportunistum WSM2075]
gi|319785231|ref|YP_004144707.1| exsB protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|259030601|gb|EEW31879.1| exsB protein [Mesorhizobium opportunistum WSM2075]
gi|317171119|gb|ADV14657.1| exsB protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 232
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 31/227 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + + LSFDYGQR+ EL+ LC ++ +
Sbjct: 4 LVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHSKELKFATLCAQRLDIA-------- 55
Query: 71 LGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ + +G + S+LT V + ++ + T VP RN I L A LA
Sbjct: 56 ---HQIIDIRQIGRGLCGSALTDGVDVPDGHYAEDTMKITVVPNRNAIMLAIAFGLAAAQ 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLA 184
+ + + D+ YPDCR I A +T + + ++ + ++TP + L K A
Sbjct: 113 QLEAVGMAAHGGDHFIYPDCRPAFIEAFQTMQDRALDGDAQIRLYTPYVNLTK------A 166
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G ++ +CY G +R+ C C C R++ +
Sbjct: 167 DIVGDGARHGTPFAQTWSCYKGG--ERH-----CGRCGTCVERREAF 206
>gi|329723264|gb|EGG59794.1| ExsB [Staphylococcus epidermidis VCU144]
Length = 83
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRK 58
ND+ K AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + C R
Sbjct: 3 QNDLNK--EKALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDKEIEVAKKNCKRT 60
Query: 59 KI 60
K
Sbjct: 61 KF 62
>gi|306842892|ref|ZP_07475528.1| exsB protein [Brucella sp. BO2]
gi|306286915|gb|EFM58435.1| exsB protein [Brucella sp. BO2]
Length = 232
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + + LSFDYGQR++ EL+ + C ++
Sbjct: 4 LVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHRKELDFAQACAKR------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ + V D+ YPDCR I A +T ++ + V L Y A
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADV----KLLAPYVHATKAD 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + E + +CY G +R+ C C C R++ +
Sbjct: 168 ILADGAKYHTPFEATWSCYKGA--ERH-----CGRCGTCVERREAF 206
>gi|254718022|ref|ZP_05179833.1| exsB protein [Brucella sp. 83/13]
gi|265982970|ref|ZP_06095705.1| queuosine biosynthesis protein queC [Brucella sp. 83/13]
gi|306839803|ref|ZP_07472604.1| exsB protein [Brucella sp. NF 2653]
gi|264661562|gb|EEZ31823.1| queuosine biosynthesis protein queC [Brucella sp. 83/13]
gi|306405158|gb|EFM61436.1| exsB protein [Brucella sp. NF 2653]
Length = 232
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + + LSFDYGQR++ EL+ + C ++
Sbjct: 4 LVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHRKELDFAQACAKR------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ + V D+ YPDCR I A +T ++ + V L Y A
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIDAFQTMQKHALDGYADV----KLLAPYVHATKAD 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + E + +CY G +R+ C C C R++ +
Sbjct: 168 IVADGAKYHTPFEATWSCYKGA--ERH-----CGRCGTCVERREAF 206
>gi|323701739|ref|ZP_08113410.1| exsB protein [Desulfotomaculum nigrificans DSM 574]
gi|323533275|gb|EGB23143.1| exsB protein [Desulfotomaculum nigrificans DSM 574]
Length = 228
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 23/191 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLC----VRKKIVEL 63
+++L SGG DS+ CL++ L L+F+YGQR+ +++ L V+ ++++L
Sbjct: 3 SIVLLSGGLDSAVCLAYGLTETKVELALTFNYGQRSATREIQAAAALANYYGVKHRVIDL 62
Query: 64 MPKW------KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
W + E+ +P + ++ + K A + +VP RN +F+
Sbjct: 63 --PWLAEITTTSLVNEEENIPEPMGPELDYIPTAKATAAAV--------WVPNRNGLFVN 112
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
AA A L +V G + + +PD + + A TA+ + V V + L K
Sbjct: 113 IAACFAETLNCQLVVAGFNREEAATFPDNTPEFVTAASTAMAYSTANQVKVVSFTNRLNK 172
Query: 178 YETWKLAQDIG 188
E L +G
Sbjct: 173 KEIVALGHRLG 183
>gi|254501553|ref|ZP_05113704.1| exsB protein [Labrenzia alexandrii DFL-11]
gi|222437624|gb|EEE44303.1| exsB protein [Labrenzia alexandrii DFL-11]
Length = 219
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 33/202 (16%)
Query: 38 LSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDSLGEDHIL-PLAILG-DISHSSLTKNV 94
+SFDYGQR+K EL+ + C D+L +HIL + +G ++ S+LT N+
Sbjct: 20 ISFDYGQRHKKELDYAKACA------------DALNTEHILIDITNIGRQLTGSALTDNI 67
Query: 95 AM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTI 151
+ ++ + T VP RN I L A +A G + V D+ YPDCR
Sbjct: 68 DVPDGHYAEDTMKITVVPNRNAIMLTIAYGIASARGAEAVATAVHGGDHFIYPDCRPAFT 127
Query: 152 RAIETAINLGME--SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
+ E +E + ++TP + + K + +G + +S +CY G
Sbjct: 128 ESFEEMQRNALEGMGEIKLYTPYVRVSKADIAAEGAKLG------VDHTKSWSCYKGGD- 180
Query: 210 KRYEWGYGCNSCPACYLRQKGW 231
C C C R++ +
Sbjct: 181 ------IHCGRCGTCVERREAF 196
>gi|150377058|ref|YP_001313654.1| exsB protein [Sinorhizobium medicae WSM419]
gi|150031605|gb|ABR63721.1| exsB protein [Sinorhizobium medicae WSM419]
Length = 236
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 94/228 (41%), Gaps = 33/228 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+++ SGG DS + + V LSFDYGQR++ EL+ +C R+
Sbjct: 4 IVICSGGLDSVSLAHKVAAEQELVCLLSFDYGQRHRKELDFAAVCARR------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT V + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDIREIGRHLTGSALTDEVDVPDGHYAEETMKTTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR I A + N ++ + V ++ P + + K E
Sbjct: 112 RKADAVATAVHGGDHFIYPDCRPGFIDAFQAMQNHALDGYADVGLYAPYVNVAKAEIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 172 GSRYGTP------FAETWSCYKGGARH-------CGRCGTCVERREAF 206
>gi|148994989|ref|ZP_01823967.1| hypothetical protein CGSSp9BS68_00402 [Streptococcus pneumoniae
SP9-BS68]
gi|147926926|gb|EDK77973.1| hypothetical protein CGSSp9BS68_00402 [Streptococcus pneumoniae
SP9-BS68]
Length = 48
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV 48
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHL 43
>gi|13474826|ref|NP_106396.1| succinoglycan biosynthesis regulator (exsB) [Mesorhizobium loti
MAFF303099]
gi|81777975|sp|Q98AZ0|QUEC1_RHILO RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|14025582|dbj|BAB52182.1| succinoglycan biosynthesis regulator; ExsB [Mesorhizobium loti
MAFF303099]
Length = 232
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 94/233 (40%), Gaps = 39/233 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL------ECRLCVRKKIVEL 63
+AL++ SGG DS + + LSFDYGQR+K EL RL V +IV++
Sbjct: 2 NALVICSGGLDSVSLAHKVATEQKLIGLLSFDYGQRHKKELGFAAICAKRLAVPHQIVDI 61
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAA 120
+ ++S S+LT NV + ++++ T VP RN I L A
Sbjct: 62 RDVGR---------------NLSGSALTDNVDVPDGHYAEDSMRITVVPNRNAIMLAIAF 106
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKY 178
+A + V D+ YPDCR I A +T N + + + ++ P + + K
Sbjct: 107 GVAAAKKADAVATAVHGGDHFIYPDCRPAFIDAFQTMQNHALAGYADIRLYAPYVNMSKA 166
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G C C C R++ +
Sbjct: 167 DIVSEGAKYATP------FEATWSCYKGGARH-------CGRCGTCVERREAF 206
>gi|147921307|ref|YP_684879.1| succinoglycan biosynthesis regulator [uncultured methanogenic
archaeon RC-I]
gi|110620275|emb|CAJ35553.1| succinoglycan biosynthesis regulator [uncultured methanogenic
archaeon RC-I]
Length = 222
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 23/225 (10%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLC----VRKKIVELMPK 66
+ S G DS D ++FDYGQR ++E+ ++C VR +++EL P
Sbjct: 1 MLSSGLDSVVAFKKEHDEHGVALAITFDYGQRAASKEIEMARQICARYHVRHEVIEL-PW 59
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K + A + + + + L + ++ +L +VP RN F+ AA
Sbjct: 60 LKQITRTALVSRQAEVPEPTEAELDEIKGRALETAHL--VWVPNRNGAFINIAAAFGDAY 117
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G IV G + + +PD + A+ ++ L E V V P++ K E +
Sbjct: 118 GYNRIVCGFNAEEGATFPDNTPAYVDAVNKSLALSCEKQVQVVAPVIHFDKEEIIREGVR 177
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
I L+ S +CY C C +C R + +
Sbjct: 178 IEAP------LDLSWSCYFAGEKP-------CGKCESCMRRARAF 209
>gi|313906545|ref|ZP_07839875.1| exsB protein [Eubacterium cellulosolvens 6]
gi|313468614|gb|EFR63986.1| exsB protein [Eubacterium cellulosolvens 6]
Length = 227
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 41/238 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L A+ ++ + V LS YGQ++ E++ V
Sbjct: 3 AMVLSSGGVDSTTALGLAIKKYGKENVIALSVSYGQKHDKEIQAARAV-----------A 51
Query: 69 DSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLP------------NTFVPGRNIIF 115
+ G E L L+ + S+ SL K +I + + +T+VP RN +F
Sbjct: 52 EYYGIEQLFLDLSKIFSYSNCSLLKQSTEEIPEESYAEQIRETGGEKPVSTYVPFRNGLF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
L AA+LA G + I G D +G YPDC +A+ AI G + + P +
Sbjct: 112 LSSAASLALSKGCSVIYYGAHADDSAGFAYPDCSPVFNKAMNDAIWEGSGHQLRIEAPFV 171
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ K K+ ++G + E + +CY G C C C R +
Sbjct: 172 NMNKAGVVKMGLELG------VPYELTWSCYEGGETP-------CGKCGTCIDRAAAF 216
>gi|89514485|gb|ABD75116.1| succinoglycan biosynthesis regulator ExsB [Sinorhizobium saheli]
Length = 139
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 18/152 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--NKVELECRLCVRKKIVELMPKW 67
S + L SGG DS+ A++ ++ + +YGQR ++ C +RK +EL
Sbjct: 2 SVVALVSGGLDSTLIAYLAIEEGVKIHPIFVNYGQRALDRELAACEGAMRKLGLELT--- 58
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ L+ G + S LT + ++++ L + F PGRN++FL+ AA AY++G
Sbjct: 59 --------VADLSGYGVLIRSGLT-DPSLRV----LEDAFTPGRNMLFLLVAAAHAYQVG 105
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAIN 159
I IG+ + S +PD ++ E I+
Sbjct: 106 ADAISIGLLHEETSLFPDQTSAFLQEAEALIS 137
>gi|239939761|ref|ZP_04691698.1| succinoglycan biosynthesis regulator [Streptomyces roseosporus NRRL
15998]
Length = 220
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 35/230 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+ + SGG DS V LS DYGQR++ E + R+ D
Sbjct: 2 IAIVSGGLDSVVLAHHLHAEGHEVHLLSIDYGQRHRKEHDYARIAA------------DR 49
Query: 71 LGEDH-ILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYR 125
+G +H I+ L+ + + +S V + Q P + VP RN+I L A A
Sbjct: 50 IGAEHEIVDLSNVASMLPGYSLTDSQVDVPDQHYTAPGSVNVVPNRNVILLSVAYGKAAA 109
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG----MESHVTVHTPLMWLKKYETW 181
+ + IG D S PDC + I + + +H+ V P + L K++
Sbjct: 110 VKADQVAIGALAGDASTAPDCSAEFISSFNAMEKIACAGYAPAHLEVVAPFIDLHKHDVI 169
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+L + +G + E+ +C+ G C +C AC R + +
Sbjct: 170 RLGEKLG------VDWTETWSCFKGTE-------VHCGTCAACVDRIQAF 206
>gi|297617393|ref|YP_003702552.1| exsB protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145230|gb|ADI01987.1| exsB protein [Syntrophothermus lipocalidus DSM 12680]
Length = 217
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 26/220 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ L SGG DS+ C AL + + L+ DYGQ+ R + VE +
Sbjct: 4 AITLLSGGLDSTLCTVLALRDMEVILALTVDYGQK----------ARTREVESAGRIAAF 53
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
H + A S LT+ + + +VP RN +F+ AA A +G
Sbjct: 54 YNIPHRVVEAGFLRTFASGLTR---AERSTRSSREVWVPNRNGLFINIAACYAEEMGAEA 110
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+++G + +PD D + A+ +++ + V V + M + K E + A +G
Sbjct: 111 VLVGFNREEAVDFPDNSPDFVSAVNRSLSYSTRNQVRVISYTMEMDKTEMLREAIRLG-- 168
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ L + +CY + C C +C L K
Sbjct: 169 ----IPLHYTWSCY-------EDGPSPCGVCASCRLLAKA 197
>gi|291443190|ref|ZP_06582580.1| exsB protein [Streptomyces roseosporus NRRL 15998]
gi|291346137|gb|EFE73041.1| exsB protein [Streptomyces roseosporus NRRL 15998]
Length = 229
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 35/230 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+ + SGG DS V LS DYGQR++ E + R+ D
Sbjct: 11 IAIVSGGLDSVVLAHHLHAEGHEVHLLSIDYGQRHRKEHDYARIAA------------DR 58
Query: 71 LGEDH-ILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYR 125
+G +H I+ L+ + + +S V + Q P + VP RN+I L A A
Sbjct: 59 IGAEHEIVDLSNVASMLPGYSLTDSQVDVPDQHYTAPGSVNVVPNRNVILLSVAYGKAAA 118
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG----MESHVTVHTPLMWLKKYETW 181
+ + IG D S PDC + I + + +H+ V P + L K++
Sbjct: 119 VKADQVAIGALAGDASTAPDCSAEFISSFNAMEKIACAGYAPAHLEVVAPFIDLHKHDVI 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+L + +G + E+ +C+ G C +C AC R + +
Sbjct: 179 RLGEKLG------VDWTETWSCFKGTE-------VHCGTCAACVDRIQAF 215
>gi|239986244|ref|ZP_04706908.1| succinoglycan biosynthesis regulator [Streptomyces roseosporus NRRL
11379]
Length = 223
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 35/230 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+ + SGG DS V LS DYGQR++ E + R+ D
Sbjct: 5 IAIVSGGLDSVVLAHHLHAEGHEVHLLSIDYGQRHRKEHDYARIAA------------DR 52
Query: 71 LGEDH-ILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYR 125
+G +H I+ L+ + + +S V + Q P + VP RN+I L A A
Sbjct: 53 IGAEHEIVDLSNVASMLPGYSLTDSQVDVPDQHYTAPGSVNVVPNRNVILLSVAYGKAAA 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG----MESHVTVHTPLMWLKKYETW 181
+ + IG D S PDC + I + + +H+ V P + L K++
Sbjct: 113 VKADQVAIGALAGDASTAPDCSAEFISSFNAMEKIACAGYAPAHLEVVAPFIDLHKHDVI 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+L + +G + E+ +C+ G C +C AC R + +
Sbjct: 173 RLGEKLG------VDWTETWSCFKGTE-------VHCGTCAACVDRIQAF 209
>gi|56698569|ref|YP_168945.1| ExsB [Ruegeria pomeroyi DSS-3]
gi|81348746|sp|Q5LM13|QUEC_SILPO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56680306|gb|AAV96972.1| ExsB [Ruegeria pomeroyi DSS-3]
Length = 230
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS + D + +SFDYGQR++ EL+ R +P
Sbjct: 4 LVICSGGLDSVSLAHKVAAEHDLIGLISFDYGQRHRKELD--FAARAATRLGVP------ 55
Query: 72 GEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D I I +S S+LT +V + ++ + T VP RN I L A +A
Sbjct: 56 -HDLIDMRQIGAHLSGSALTDDVDVPDGHYAEDTMKITVVPNRNAIMLAIAFGIAAAKQA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV--HTPLMWLKKYETWKLAQD 186
+ V D+ YPDCR +A E ++ + +V +TP + K
Sbjct: 115 DAVATAVHGGDHFIYPDCRPGFTQAFEAMQAQALDGYASVRLYTPFVHEPKSAI------ 168
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + N ++ +CY G C C C R++ +
Sbjct: 169 VTEGERHNTPFADTWSCYKGGE-------VHCGRCGTCVERREAF 206
>gi|239832974|ref|ZP_04681303.1| exsB protein [Ochrobactrum intermedium LMG 3301]
gi|239825241|gb|EEQ96809.1| exsB protein [Ochrobactrum intermedium LMG 3301]
Length = 232
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + LSFDYGQR++ EL+ + C +
Sbjct: 4 LVVCSGGLDSVSLAYRIAGEHQLTALLSFDYGQRHRKELDSAKACAER------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 52 LGAPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKITVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
+ + V D+ YPDCR I A +T N ++ + +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIDAFQTMQNHALDGYADI 154
>gi|254713616|ref|ZP_05175427.1| exsB protein [Brucella ceti M644/93/1]
gi|254716030|ref|ZP_05177841.1| exsB protein [Brucella ceti M13/05/1]
gi|261217798|ref|ZP_05932079.1| queuosine biosynthesis protein queC [Brucella ceti M13/05/1]
gi|261321354|ref|ZP_05960551.1| queuosine biosynthesis protein queC [Brucella ceti M644/93/1]
gi|260922887|gb|EEX89455.1| queuosine biosynthesis protein queC [Brucella ceti M13/05/1]
gi|261294044|gb|EEX97540.1| queuosine biosynthesis protein queC [Brucella ceti M644/93/1]
Length = 232
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + + LSFDYG R+K EL+ + C ++
Sbjct: 4 LVICSGGLDSVSLAHKMAAEHELTGLLSFDYGLRHKKELDFAQACAKR------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ + V D+ YPDCR I A +T ++ + V L Y A
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADV----KLLAPYVHATKAD 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G D+ C C C R++ +
Sbjct: 168 IVADGAKYRTPFEATWSCYKGA-DRH------CGRCGTCVERREAF 206
>gi|254489139|ref|ZP_05102343.1| exsB protein [Roseobacter sp. GAI101]
gi|214042147|gb|EEB82786.1| exsB protein [Roseobacter sp. GAI101]
Length = 215
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 39/205 (19%)
Query: 38 LSFDYGQRNKVELE------CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLT 91
+SFDYGQR++ EL+ RL V I++L AI ++ S+LT
Sbjct: 12 VSFDYGQRHRKELDYAALCAARLEVPHDIIDLR---------------AIGAALTGSALT 56
Query: 92 KNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRH 148
++ + + ++ T VP RN I L A +A G + V D+ YPDCR
Sbjct: 57 DDIDVPDGHYAEESMRITVVPNRNAIMLTVAFGVAAARGDQAVATAVHGGDHFIYPDCRP 116
Query: 149 DTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLG 206
+A E +E + V+++TP + K A + + ++ +CY G
Sbjct: 117 AFTQAFEAMQKAALEGYADVSLYTPFVNRTK------ADIVTEGARCDTPFAQTWSCYKG 170
Query: 207 KRDKRYEWGYGCNSCPACYLRQKGW 231
+ C C C R++ +
Sbjct: 171 GT-------HHCGRCGTCVERREAF 188
>gi|294851210|ref|ZP_06791883.1| exsB protein [Brucella sp. NVSL 07-0026]
gi|294819799|gb|EFG36798.1| exsB protein [Brucella sp. NVSL 07-0026]
Length = 232
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + + LSFDYGQR+K EL+ + C ++
Sbjct: 4 LVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKR------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT +V + + + T V RN I L A +A
Sbjct: 52 LGVPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVSNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ + V D+ YPDCR I A +T ++ + V L Y A
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADV----KLLAPYVHATKAD 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G D+ C C C R++ +
Sbjct: 168 IVADGAKYRTPFEATWSCYKGA-DRH------CGRCGTCVERREAF 206
>gi|153008345|ref|YP_001369560.1| exsB protein [Ochrobactrum anthropi ATCC 49188]
gi|167016440|sp|A6WXM7|QUEC_OCHA4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151560233|gb|ABS13731.1| exsB protein [Ochrobactrum anthropi ATCC 49188]
Length = 232
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
L++ SGG DS + LSFDYGQR+K EL+ + C +
Sbjct: 4 LVVCSGGLDSVSLAYRIASEHQLTALLSFDYGQRHKKELDSAKACAER------------ 51
Query: 71 LGEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT ++ + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDITNIGASLTGSALTDDIDVPDGHYAEETMKITVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
I + V D+ YPDCR I A +T N ++ + +
Sbjct: 112 QKAEAIALAVHGGDHFIYPDCRPGFIDAFQTMQNHALDGYADI 154
>gi|149916375|ref|ZP_01904895.1| hypothetical protein RAZWK3B_12312 [Roseobacter sp. AzwK-3b]
gi|149809829|gb|EDM69681.1| hypothetical protein RAZWK3B_12312 [Roseobacter sp. AzwK-3b]
Length = 230
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 39/231 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------RLCVRKKIVELMP 65
+++ SGG DS + + LSFDYGQR+ EL+ RL V ++V+L
Sbjct: 4 IVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHAKELDFAARCAERLGVAHRVVDLR- 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
A+ ++ S+LT ++ + + + T VP RN I L +
Sbjct: 63 --------------AVGAALTGSALTDDLDVPDGHYAEETMKITVVPNRNAIMLAVGFGM 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYET 180
A + V D+ YPDCR D I A + + ++ + V ++TP + K +
Sbjct: 109 AAAQKADAVATAVHGGDHFIYPDCRPDFIAAFQAMEDHALDGVAKVQLYTPFVTGSKADI 168
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E++ +CY G C C C R++ +
Sbjct: 169 VTEGARHGTP------FEDTWSCYKGGE-------VHCGRCGTCVERREAF 206
>gi|220936088|ref|YP_002514987.1| ExsB family protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219997398|gb|ACL74000.1| ExsB family protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 213
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 89/224 (39%), Gaps = 40/224 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+LLL SGG +S+T L+ R V L DYGQR + + + L P D
Sbjct: 12 SLLLLSGGIESATLLALE-SRQRPVTPLVVDYGQRGALRERDAARAQCESHGLTPVELD- 69
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
L+ G L K P+ +P RN++ L A + A R GI
Sbjct: 70 --------LSATGGTFRDGLLKR----------PHVPLPHRNLVILSLAVSYAARGGIDR 111
Query: 131 IVIGVCETDYSGYPDCRH---DTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V+ + D + YP + RA+ + G+E + TPL+ K +L +
Sbjct: 112 VVLALNRDDLAAYPSASPGFLEHFRALIHDLQPGLE----ITTPLIDRDKAGVIRLGVSL 167
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G + + +C LG YE C +CP C R+ +
Sbjct: 168 G------VDFARTWSCLLG-----YET--HCGACPQCLHRRAAF 198
>gi|301155019|emb|CBW14482.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 66
Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELE 51
I++ AL++FSGGQDS+TCL + F + VE ++F YGQR+ +ELE
Sbjct: 3 IQQNKKALVIFSGGQDSTTCLFQVIAEFGKENVEVVTFQYGQRHAIELE 51
>gi|332716136|ref|YP_004443602.1| succinoglycan biosynthesis regulator [Agrobacterium sp. H13-3]
gi|325062821|gb|ADY66511.1| succinoglycan biosynthesis regulator [Agrobacterium sp. H13-3]
Length = 236
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++ SGG DS + + + +SFDYGQR+K EL+ K++ +P
Sbjct: 4 IVICSGGLDSVSLAHKIAAEHELLALVSFDYGQRHKKELDFAADCAKRLG--VPH----- 56
Query: 72 GEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + +G ++ S+LT ++ + + + +T VP RN I L A LA
Sbjct: 57 ---HVIDITTIGAHLTGSALTDDIDVPDGHYAEETMRSTVVPNRNAIMLTIAFGLAAAQQ 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
+ I V D+ YPDCR I + +E + VT+ P + + K A
Sbjct: 114 ADAVAIAVHGGDHFIYPDCRPGFIDSFNAMQAHALEGYADVTLFAPYVTVSKAAIVTDAV 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 174 KYGTP------FGETWSCYKGGSRH-------CGRCGTCVERREAF 206
>gi|265991899|ref|ZP_06104456.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
Rev.1]
gi|263002921|gb|EEZ15258.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
Rev.1]
Length = 213
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 29/200 (14%)
Query: 38 LSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDSLGEDH-ILPLAILG-DISHSSLTKNV 94
LSFDYGQR+K EL+ + C ++ LG H I+ + +G ++ S+LT +V
Sbjct: 11 LSFDYGQRHKKELDFAQACAKR------------LGVPHQIIDIRTIGASLTGSALTDDV 58
Query: 95 AM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTI 151
+ + + T VP RN I L A +A + + V D+ YPDCR I
Sbjct: 59 DVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKADAVALAVHGGDHFIYPDCRPGFI 118
Query: 152 RAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKR 211
A +T ++ + V L Y A + E + +CY G D+
Sbjct: 119 EAFQTMQKHALDGYADV----KLLAPYVHATKADIVADGAKYRTPFEATWSCYKGA-DRH 173
Query: 212 YEWGYGCNSCPACYLRQKGW 231
C C C R++ +
Sbjct: 174 ------CGRCGTCVERREAF 187
>gi|256045475|ref|ZP_05448360.1| exsB protein [Brucella melitensis bv. 1 str. Rev.1]
Length = 217
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 29/200 (14%)
Query: 38 LSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDSLGEDH-ILPLAILG-DISHSSLTKNV 94
LSFDYGQR+K EL+ + C ++ LG H I+ + +G ++ S+LT +V
Sbjct: 15 LSFDYGQRHKKELDFAQACAKR------------LGVPHQIIDIRTIGASLTGSALTDDV 62
Query: 95 AM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTI 151
+ + + T VP RN I L A +A + + V D+ YPDCR I
Sbjct: 63 DVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKADAVALAVHGGDHFIYPDCRPGFI 122
Query: 152 RAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKR 211
A +T ++ + V L Y A + E + +CY G D+
Sbjct: 123 EAFQTMQKHALDGYADV----KLLAPYVHATKADIVADGAKYRTPFEATWSCYKGA-DRH 177
Query: 212 YEWGYGCNSCPACYLRQKGW 231
C C C R++ +
Sbjct: 178 ------CGRCGTCVERREAF 191
>gi|110636377|ref|YP_676585.1| exsB protein [Mesorhizobium sp. BNC1]
gi|118574288|sp|Q11B05|QUEC_MESSB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110287361|gb|ABG65420.1| exsB protein [Chelativorans sp. BNC1]
Length = 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 31/227 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
++ SGG DS + +SFDYGQR+K EL+ R C ++ V M
Sbjct: 4 FVICSGGLDSVSLAHKVAVEKTLAGLISFDYGQRHKKELDFARACAQRLDVRHM------ 57
Query: 71 LGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ + +G+ ++ S+LT + + ++ + T VP RN I L A +A
Sbjct: 58 -----IIDIRAVGEGLAGSALTDEIDVPNGHYAEDTMRITVVPNRNAIMLAIAFGVAAAQ 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIET--AINLGMESHVTVHTPLMWLKKYETWKLA 184
+ V D+ YPDCR I A + A L + + ++ P + L K A
Sbjct: 113 NADAVATAVHGGDHFIYPDCRPGFIEAFQAMQAQALDGYAKIALYAPYVNLSK------A 166
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G + + C C C R++ +
Sbjct: 167 NIVSDGVRHRTPFEATWSCYKGGK-------HHCGRCGTCVERREAF 206
>gi|119386890|ref|YP_917945.1| exsB protein [Paracoccus denitrificans PD1222]
gi|167016441|sp|A1B9Q5|QUEC_PARDP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119377485|gb|ABL72249.1| exsB protein [Paracoccus denitrificans PD1222]
Length = 233
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+++ SGG DS + + +SFDYGQR++ EL+ L R+ V
Sbjct: 4 IVVCSGGLDSVSLAHMVAAQGGLTRLISFDYGQRHRKELDYAALAARRLGVP-------- 55
Query: 71 LGEDHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
H++ + +G + + S+LT + + + T VP RN I L A +A +
Sbjct: 56 ---HHVIDMRGVGAVLTGSALTGGAEVPDGHYAEETMRITVVPNRNAIMLTVAFGMAAAM 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYE 179
G + V D+ YPDCR +A + + ++ + TP + K +
Sbjct: 113 GDQAVATAVHGGDHFIYPDCRPAFTQAFQQMQDAALDGYAQARLLTPFVHRTKAD 167
>gi|91976078|ref|YP_568737.1| ExsB [Rhodopseudomonas palustris BisB5]
gi|91682534|gb|ABE38836.1| ExsB [Rhodopseudomonas palustris BisB5]
Length = 206
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 36/234 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SALLL SGG DS+T W +++ + L FDYGQ CV K+ L
Sbjct: 2 SALLLCSGGLDSTTVGYWLVEKNISFQPLFFDYGQH---------CVEKEWETLQEVLPI 52
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAATLA 123
S +L + I +I S ++ +A ++D++L ++P R ++F A +A
Sbjct: 53 SGLVSPLLRINI-SEIFQHSPSRLIAEPNLWTEHVEDDDL---YIPYRTLMFFSVGACIA 108
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIET-AINLGMESHVTVHTPLMWLKKYETWK 182
G+ + G ++++ DC + +++ + +LG P+ + + W
Sbjct: 109 QTRGLDAVYAGFINSNHAKELDCSAAFLNNLDSLSRSLG---------PVRFELPFRDWS 159
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A + + + + + ++++C L C +CP C R F+E
Sbjct: 160 KADVVRRANELRVPVGKTYSCQLFSDTP-------CGACPNCVERISAIESFRE 206
>gi|222082947|ref|YP_002542312.1| succinoglycan biosynthesis transcriptional regulator protein
[Agrobacterium radiobacter K84]
gi|254764294|sp|B9JLH9|QUEC_AGRRK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|221727626|gb|ACM30715.1| succinoglycan biosynthesis transcriptional regulator protein
[Agrobacterium radiobacter K84]
Length = 236
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++ SGG DS + + +SFDYGQR++ EL+ K+ L
Sbjct: 4 IVVCSGGLDSVSLAHKVAAEQQLIGLVSFDYGQRHRKELDFAAACAKR-----------L 52
Query: 72 GEDH-ILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
G H I+ + +G ++ S+LT +V + + + T VP RN I L A LA
Sbjct: 53 GVPHEIIDITTIGKHLTGSALTDDVDVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQ 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLA 184
+ + V D+ YPDCR I A + N ++ + V+++ P + K A
Sbjct: 113 KADAVAVAVHGGDHFIYPDCRPGFIDAFQQMQNQALDGYASVSLYAPFVMTSK------A 166
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E+ +CY G +R+ C C C R++ +
Sbjct: 167 DIVTDGARHKTPFAETWSCYKGG--ERH-----CGRCGTCVERREAF 206
>gi|15891587|ref|NP_357259.1| succinoglycan biosynthesis regulator [Agrobacterium tumefaciens
str. C58]
gi|81489986|sp|Q8UAM7|QUEC_AGRT5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|15160023|gb|AAK90044.1| succinoglycan biosynthesis regulator [Agrobacterium tumefaciens
str. C58]
Length = 236
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++ SGG DS + + + +SFDYGQR+K EL+ K++ +P
Sbjct: 4 IVICSGGLDSVSLAHKIAAEHELLALVSFDYGQRHKKELDFAADCAKRLG--VPH----- 56
Query: 72 GEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + +G ++ S+LT ++ + + + +T VP RN I L A LA
Sbjct: 57 ---HLIDIGTIGAHLTGSALTDDIDVPDGHYAEETMRSTVVPNRNAIMLTIAFGLAAAQQ 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
+ I V D+ YPDCR I + +E + VT+ P + + K A
Sbjct: 114 ADAVAIAVHGGDHFIYPDCRPGFIGSFNAMQAHALEGYADVTLFAPYVTVSKAAIVTDAV 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 174 KYGTP------FGETWSCYKGGLRH-------CGRCGTCVERREAF 206
>gi|42523689|ref|NP_969069.1| succinoglycan biosynthesis regulator [Bdellovibrio bacteriovorus
HD100]
gi|81617090|sp|Q6MKZ5|QUEC_BDEBA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|39575896|emb|CAE80062.1| succinoglycan biosynthesis regulator [Bdellovibrio bacteriovorus
HD100]
Length = 231
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 22/196 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRN-KVELEC------RLCV 56
+KK ++L S G DS+ A+ V L+F+YGQR K ELE L +
Sbjct: 1 MKKNKKVVVLLSAGLDSTVNAYEAIKHHHEIVLALTFNYGQRAAKKELEASANIAKHLGI 60
Query: 57 RKKIVELMPKWKDS-----LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
K+VEL P +KD L ED +P +I + ++ A + +VP R
Sbjct: 61 PHKVVEL-PWFKDFNKSSLLVEDQAVPTGSAVEIDNQQKSEETAKSV--------WVPNR 111
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
N IFL AA A LG ++ G + + +PD + + ++ +HVTV
Sbjct: 112 NGIFLNIAAAYAEALGADAVIPGFNAEEAATFPDNSREFLEQATKSLWYSTSNHVTVGCY 171
Query: 172 LMWLKKYETWKLAQDI 187
LKK + +L Q +
Sbjct: 172 TAHLKKPDIVRLGQGL 187
>gi|16264811|ref|NP_437603.1| hypothetical protein SM_b20940 [Sinorhizobium meliloti 1021]
gi|307308043|ref|ZP_07587761.1| exsB protein [Sinorhizobium meliloti BL225C]
gi|307319888|ref|ZP_07599311.1| exsB protein [Sinorhizobium meliloti AK83]
gi|81811844|sp|Q92UN9|QUEC_RHIME RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|15140949|emb|CAC49463.1| probable succinoglycan biosynthesis regulator [Sinorhizobium
meliloti 1021]
gi|306894428|gb|EFN25191.1| exsB protein [Sinorhizobium meliloti AK83]
gi|306901447|gb|EFN32051.1| exsB protein [Sinorhizobium meliloti BL225C]
Length = 236
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+++ SGG DS + + LSFDYGQR++ EL+ C R+
Sbjct: 4 IVICSGGLDSVSLAHKVAAEQELSGLLSFDYGQRHRKELDFAAACARR------------ 51
Query: 71 LGEDH-ILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT V + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDIREIGRRLTGSALTDEVDVPDGHYAEETMKATVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR I A + + ++ + V ++ P + + K + +
Sbjct: 112 RKADAVATAVHGGDHFIYPDCRPGFIDAFQAMQDHALDGYADVALYAPFVNVSKAD---I 168
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
D D E+ +CY G R+ C C C R++ +
Sbjct: 169 VADGARHDTP---FAETWSCYKGG--ARH-----CGRCGTCVERREAF 206
>gi|222149729|ref|YP_002550686.1| succinoglycan biosynthesis regulator [Agrobacterium vitis S4]
gi|254764295|sp|B9JS46|QUEC_AGRVS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|221736711|gb|ACM37674.1| succinoglycan biosynthesis regulator [Agrobacterium vitis S4]
Length = 235
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS + + + +SFDYGQR+K EL+ K+ L
Sbjct: 4 LVVCSGGLDSVSLADKMAAEHELIGLISFDYGQRHKKELDFAALAAKR-----------L 52
Query: 72 GEDH-ILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
G H I+ + +G ++ S+LT ++ + + + T VP RN I L A +A
Sbjct: 53 GVPHQIIDMTNIGASLTGSALTDDLDVPDGHYAEETMKITVVPNRNAIMLAIAFGVAAAK 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWKLA 184
+ + V D+ YPDCR I A + +E + V P + + K +
Sbjct: 113 KADAVALAVHGGDHFIYPDCRPGFIDAFQIMQAHALEGYADVKLLAPFVTVSKADIVTEG 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G +++ +CY G R+ C C C R++ +
Sbjct: 173 AKYGTP------FDQTWSCYKGG--ARH-----CGRCGTCVERREAF 206
>gi|325967840|ref|YP_004244032.1| queuosine synthesis protein [Vulcanisaeta moutnovskia 768-28]
gi|323707043|gb|ADY00530.1| Queuosine synthesis [Vulcanisaeta moutnovskia 768-28]
Length = 235
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 90/231 (38%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+LL SGG DS+ L R V +S +Y R + E E ++ K ++
Sbjct: 5 AILLLSGGIDSAVALYLLKSRNYDVVAISINYPGRGERERES--------ARILAKLTNT 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ +P + +I K + + P+T +P RN I AA A LGI
Sbjct: 57 RLIEVDIPF--MKEIVELWNNKEERPEHLRDAHPST-IPARNAIIYAVAAYYAEILGINI 113
Query: 131 IVIGVCETDYSGYPDC----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
IV G D +PD R RA+ ++G + V PL L K E KL
Sbjct: 114 IVAGHNADDTKYFPDTSRMFRKIISRALTIGTHIGKTKGLRVIAPLSKLNKTEVVKLGLK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + E + +C+ + C C C R++ + E K
Sbjct: 174 LG------VPFEYTWSCH-------NNYDKPCGQCSGCLARKRAFDELGVK 211
>gi|307595994|ref|YP_003902311.1| Queuosine synthesis [Vulcanisaeta distributa DSM 14429]
gi|307551195|gb|ADN51260.1| Queuosine synthesis [Vulcanisaeta distributa DSM 14429]
Length = 235
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 91/231 (39%), Gaps = 28/231 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+LL SGG DS+ L R V LS +Y R + E R+ EL
Sbjct: 5 AILLLSGGIDSAVALYLLKSRGYDVIALSINYPGRGERE-------RESARELARLTNTK 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
L E + + + ++ ++ + ++ N P+T +P RN I AA A GI
Sbjct: 58 LIEVDLPFMREVDELWNNDDERPSHLR---NAHPST-IPARNAIIYAVAAYYAEVFGIDT 113
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYETWKLAQD 186
IV G D +PD + R I A+ +G + V PL L K + +L
Sbjct: 114 IVAGHNADDTKYFPDTSREFRRFISRALTIGTYIGRARGLRVIAPLSGLSKTDVVRLGLK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + E + +C+ + C C C R++ + E K
Sbjct: 174 LG------VPFEYTWSCH-------NNYDVPCGQCSGCLARRRAFNELGVK 211
>gi|221200023|ref|ZP_03573066.1| ExsB [Burkholderia multivorans CGD2M]
gi|221206823|ref|ZP_03579835.1| ExsB [Burkholderia multivorans CGD2]
gi|221173478|gb|EEE05913.1| ExsB [Burkholderia multivorans CGD2]
gi|221180262|gb|EEE12666.1| ExsB [Burkholderia multivorans CGD2M]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
ALLL SGG DS+T V + FDYGQ + VE+E ++ E++P
Sbjct: 4 ALLLASGGLDSTTVGYQLATTGVEVVPIFFDYGQ-HCVEIEW-----SRVNEVLPA---D 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ L ++ + S S L + + ++QD++L ++P R ++F AA A +G
Sbjct: 55 MQRPERLVISDIFRGSQSRLIREADLWTEEVQDDDL---YIPYRTMLFFAAAAARAQTVG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH---VTVHTPLMWLKKYETWKLA 184
I ++ G ++++ DC + ++ G+ S V H+P + K + + A
Sbjct: 112 ILDVYTGFINSNHAKEIDCTAAFMNNLD-----GLTSSIGPVRFHSPFRYSSKADVARAA 166
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++G + + +++C + + C +CP C R E K
Sbjct: 167 AELG------VPIGRTYSCQASAQ-------FPCGACPNCVERLNALKEAK 204
>gi|169831397|ref|YP_001717379.1| exsB protein [Candidatus Desulforudis audaxviator MP104C]
gi|254764331|sp|B1I3W2|QUEC_DESAP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169638241|gb|ACA59747.1| exsB protein [Candidatus Desulforudis audaxviator MP104C]
Length = 220
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 34/196 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-------RNKVELECRLCVRKKIVEL 63
++L SGG DS+ CL++ + + L+ DYGQ L +R ++VEL
Sbjct: 3 GIVLLSGGLDSAVCLAFGVRSLEVALCLTADYGQLAAGREIAAAAALSAHYGIRHQVVEL 62
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVA------MKIQD-----NNLPNTFVPGRN 112
L +I S+LT + M++ D +VP RN
Sbjct: 63 ----------------PFLREIDCSALTGRLGLPEPEEMELDDPVRSAETARQVWVPNRN 106
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
+ + AA A LG I+ G + +PD + A+ ++ S + V +
Sbjct: 107 GLLVNVAACYAEALGCERIIAGFNREEAQHFPDNSPQFLDAVNHSLAYSTLSGIRVISYT 166
Query: 173 MWLKKYETWKLAQDIG 188
L K E L Q +G
Sbjct: 167 QQLDKAEIVALGQRLG 182
>gi|255318486|ref|ZP_05359719.1| ExsB family protein [Acinetobacter radioresistens SK82]
gi|262378716|ref|ZP_06071873.1| ExsB superfamily [Acinetobacter radioresistens SH164]
gi|255304478|gb|EET83662.1| ExsB family protein [Acinetobacter radioresistens SK82]
gi|262300001|gb|EEY87913.1| ExsB superfamily [Acinetobacter radioresistens SH164]
Length = 201
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
++LL SGG DS+ W + L+ DYGQ + + + + I +
Sbjct: 3 SVLLLSGGMDSTAIAWWKRPDY----ALTIDYGQ---LAAKAEIAASQSICRYLN----- 50
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLGIT 129
+P IL + + ++A I+ + P + + P RN + + A I+
Sbjct: 51 ------IPHEILTVDCRNIGSGDMAGTIESKHAPASDWWPYRNQLLITLAGMKMLPFNIS 104
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I+IG +TD +G+ D H+ I A+ + L E H+TV P + L E +L+
Sbjct: 105 KILIGTVKTD-NGHTDGSHEFIDAMNQLMFL-QEGHITVEAPAINLSTKELIQLS----- 157
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
++ +L SH+C+ + C +C C
Sbjct: 158 -NIPAELLAWSHSCHKSE--------VTCGNCRGC 183
>gi|145592302|ref|YP_001154304.1| ExsB family protein [Pyrobaculum arsenaticum DSM 13514]
gi|145284070|gb|ABP51652.1| ExsB family protein [Pyrobaculum arsenaticum DSM 13514]
Length = 266
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP-KWKD 69
A+ + SGG DS+ + L R V +SF YGQ+ +E+E + +KI ++ K
Sbjct: 6 AVAVVSGGPDSTCYTTLWLKRGCDVHAISFLYGQKASIEVERAQALLRKIDQIAAEKGWG 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF--LVFAATLAYRLG 127
+ E ++ L+ L ++ + + A+ ++++ P VP RN++ + A R
Sbjct: 66 RIVEHKVINLSQLAELWRGTQLTDAAVAVEESYTPTVVVPIRNVVMAAIATAYAYTIRSA 125
Query: 128 ITNIVIGVCETDYSG-----------YPDCRHDTIRAIETAI---NLGMESHVTVHTPLM 173
V + + Y YPDC + A++ A + E V + TP
Sbjct: 126 AGTKVYVILGSHYDDIRPRDDTWEPRYPDCSPECFEALQAAFRICHFRAERDVEIWTPSR 185
Query: 174 -WLKKYETWK-LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+K + + +++G DLV E+ +CY C +C +C R +
Sbjct: 186 EGLRKSQLLRECYREVG--DLVY----ETWSCYKSGEAH-------CGACESCANRHAAF 232
Query: 232 ME 233
+E
Sbjct: 233 LE 234
>gi|289810346|ref|ZP_06540975.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 56
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 166 VTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
+ TPLMW+ K ETW LA D GQ ++L+ EE+ TCY G + G GC C AC
Sbjct: 4 IRFETPLMWIDKAETWALA-DYWGQ--LDLVREETLTCYNGIK------GDGCGHCAACN 54
Query: 226 LR 227
LR
Sbjct: 55 LR 56
>gi|294055330|ref|YP_003548988.1| exsB protein [Coraliomargarita akajimensis DSM 45221]
gi|293614663|gb|ADE54818.1| exsB protein [Coraliomargarita akajimensis DSM 45221]
Length = 240
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE--CRLCVRKKIVELMPKWKD 69
++++SGG DS+ L + LS +YGQR+ ELE ++C +V++ + D
Sbjct: 4 VIIYSGGLDSTVLLYHLRAVGAELFALSVNYGQRHCCELERAAQICA---VVDVPHQIAD 60
Query: 70 SLGEDHILPLAILGDISHSSLTK---NVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + SSLT +VA + + T VP RN+I L A A
Sbjct: 61 LSSVQSLL--------AGSSLTSPEIDVAEGHYTEETMKTTVVPNRNMILLALATGHALS 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ ++ D++ YPDCR++ A+ A+ L + V + P + W A
Sbjct: 113 VKAESVAYAAHSGDHAIYPDCRNEFADAMAAAMALCDWNQVKLDRPFV------DWTKAD 166
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + + E + +CY G C C C R++ +
Sbjct: 167 IVRRGAELKVPFEMTWSCYKGGE-------VHCGKCGTCIERREAF 205
>gi|317051375|ref|YP_004112491.1| exsB protein [Desulfurispirillum indicum S5]
gi|316946459|gb|ADU65935.1| exsB protein [Desulfurispirillum indicum S5]
Length = 216
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
PSA+ L SGG DS+ L L V L+ YGQ ++K +
Sbjct: 3 PSAVALLSGGMDSTCALLKYLHDGGVVRHALTMAYGQ----------LAQEKEIAAAAAI 52
Query: 68 KDSLGEDH-ILPLAILGDISHSSLTKNVA--------MKIQDNNLPNTFVPGRNIIFLVF 118
D LG H + L L +S+SSL + + + + + +VP RN +F+
Sbjct: 53 CDHLGIPHETVELPFLARLSNSSLNRGTIPENIDINDTRQSEQSARSVWVPNRNGLFINI 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA A +G +I+ G + +PD D + A A++ + V + + + K
Sbjct: 113 AAVFAESMGCQHIITGFNVEEAQTFPDNSRDFLMAANGALHFSTLDTLFVVSGTIDMDKK 172
Query: 179 ETWKLAQDIGGQDLVNLI-LEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E I G + N +E +CY G+ C +C +C LR K +E
Sbjct: 173 E-------IAGYLMRNAFPMELIWSCYKGEE-------VPCGTCESC-LRMKRAIE 213
>gi|167043380|gb|ABZ08083.1| putative ExsB [uncultured marine crenarchaeote HF4000_ANIW141O9]
Length = 233
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGG DS + ++ +++ + +SF YGQ+ E++ + K + K+
Sbjct: 13 AVVVFSGGIDSVSTCTYLKQKYE-LYGISFLYGQKANQEIK-----KAKSFAKILGLKEH 66
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
D + GD + + +K KI + VP RN IFL A A+ + +
Sbjct: 67 KVVDINFMKKLYGDTNALTSSKK---KIPSKFNYSVVVPIRNGIFLSIATAWAFSINASL 123
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
+ G D YPDCR + IE A N G
Sbjct: 124 VAYGAHMGD-KNYPDCRPAFSKKIEFAFNQG 153
>gi|1143535|emb|CAA90569.1| ExsB [Sinorhizobium meliloti]
gi|2808500|emb|CAA12530.1| ExsB protein [Sinorhizobium meliloti]
Length = 234
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDS 70
+++ SGG DS + + LSFDYGQR++ EL+ C R+
Sbjct: 4 IVICSGGLDSVSLAHKVAAEQELSGLLSFDYGQRHRKELDFAAACARR------------ 51
Query: 71 LGEDH-ILPLAILGD-ISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
LG H I+ + +G ++ S+LT V + + + T VP RN I L A +A
Sbjct: 52 LGVPHQIIDIREIGRRLTGSALTDEVDVPDGHYAEETMKATVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYE 179
+ V D+ YPDCR I A + + ++ + V ++ P + + K +
Sbjct: 112 RKADAVATAVHGGDHFIYPDCRPGFIDAFQAMQDHALDGYADVALYAPFVNVSKAD 167
>gi|167584746|ref|ZP_02377134.1| putative ExsB [Burkholderia ubonensis Bu]
Length = 206
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 30/228 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
ALLL SGG DS+T V + FDYGQ + V++E ++ E++P
Sbjct: 4 ALLLASGGLDSTTVGYQLAATGVEVVPIFFDYGQ-HCVDVEW-----SRVNEVLPA---G 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ ++ + S S L + + ++ + ++P R ++F AA A +GI +
Sbjct: 55 MRRPERFDVSDIFRGSQSRLIREADLWTEEVKDDDLYIPYRTMLFFAAAAARAQTVGILD 114
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH---VTVHTPLMWLKKYETWKLAQDI 187
+ G ++++ DC + +++ G+ S V H+P + K + + A +
Sbjct: 115 VYTGFINSNHAKEIDCTAAFMNSLD-----GLTSSIGPVRFHSPFRYSSKVDVVRAAAEF 169
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
G + + +++C + + + C +CP C R E K
Sbjct: 170 G------VPIGRTYSCQVSAQ-------FPCGACPNCVERLNALKEAK 204
>gi|315427301|dbj|BAJ48912.1| transcription regulator ExsB related protein [Candidatus
Caldiarchaeum subterraneum]
gi|315428195|dbj|BAJ49779.1| transcription regulator ExsB related protein [Candidatus
Caldiarchaeum subterraneum]
Length = 216
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 86/223 (38%), Gaps = 35/223 (15%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS+ L + L+ +RN E+E KKI K + G
Sbjct: 6 LVSGGIDSTVMLWKLRSEGHSILPLTLLTFRRNPREIEAA----KKIS------KAASGR 55
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ I+ D+S + I++ +LPN +P RNIIF AA +A
Sbjct: 56 E-----PIVYDVSFLRELYDYPQHIKERVFQQFPSLPNIVIPYRNIIFYSVAAYVACHEA 110
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-VTVHTPLMWLKKYETWKLAQD 186
I G D PD + +E +N H V + TP+ L K E +L +
Sbjct: 111 AEAIAGGHTREDMERIPDVGEEFFADLEKILNKSTPFHRVKILTPVAGLWKPEIMRLGVE 170
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+G + E+ +C+ + C CP C R++
Sbjct: 171 LGAP------IGETWSCW-------SVFEKHCGKCPGCLSRKE 200
>gi|315425945|dbj|BAJ47595.1| transcription regulator ExsB related protein [Candidatus
Caldiarchaeum subterraneum]
Length = 213
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 35/225 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L SGG DS+ L + L+ +RN E+E + K P
Sbjct: 1 MALVSGGIDSTVMLWKLRSEGHSIVPLTLLTFRRNPREIEAAKKISKAASGCEP------ 54
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAYR 125
I+ D+S + I++ +LPN +P RNIIF AA +A
Sbjct: 55 ---------IVYDVSFLRELYDYPQHIKERVFQQFPSLPNIVIPYRNIIFYSVAAYVACH 105
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-VTVHTPLMWLKKYETWKLA 184
I G D PD + +E +N H V + TP+ L K E +L
Sbjct: 106 EAAEAIAGGHTREDMERIPDVGEEFFADLEKILNKSTPFHRVKILTPVAGLWKPEIMRLG 165
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
++G + E+ +C+ + C CP C R++
Sbjct: 166 VELGAP------IGETWSCW-------SVFEKHCGKCPGCLSRKE 197
>gi|147677737|ref|YP_001211952.1| PP-loop superfamily ATPase [Pelotomaculum thermopropionicum SI]
gi|189038932|sp|A5D2E1|QUEC_PELTS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|146273834|dbj|BAF59583.1| predicted PP-loop superfamily ATPase [Pelotomaculum
thermopropionicum SI]
Length = 221
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 17/188 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-------VRKKIVEL 63
+++L SGG DS+ L+ +L + L+FDYGQ+ + +R +++EL
Sbjct: 3 SIVLLSGGLDSAVSLACSLQGGEVCLCLTFDYGQKAAEREKKAAAALAAHYKLRHRVIEL 62
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT---FVPGRNIIFLVFAA 120
P K+ I A++ + S + + + + + +VP RN +F+ AA
Sbjct: 63 -PFLKE------ITSTALVSETSELPAAEEEELDENEASRSSAALVWVPNRNGVFINIAA 115
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A +V G + + +PD + + A +++ + V V + L K E
Sbjct: 116 AFAEAYRCDLVVTGFNREEAASFPDNSPEFVVAANASLSYSTLNKVRVASYTQGLNKTEI 175
Query: 181 WKLAQDIG 188
KL ++G
Sbjct: 176 VKLGMNMG 183
>gi|269964052|ref|ZP_06178357.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831193|gb|EEZ85347.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 73
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
MWL K ETW LA D + L+ E + TCY G G GC CP+C LR+ G
Sbjct: 1 MWLNKAETWALADQY---DALQLVRENTLTCYNGII------GDGCGDCPSCDLRKAGLD 51
Query: 233 EF 234
++
Sbjct: 52 DY 53
>gi|283853712|ref|ZP_06370941.1| ExsB family protein [Desulfovibrio sp. FW1012B]
gi|283570890|gb|EFC18921.1| ExsB family protein [Desulfovibrio sp. FW1012B]
Length = 201
Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 51/221 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWKDSL 71
+L SGG DS++ W F + DYGQ+ + E+ V K+I +
Sbjct: 7 ILLSGGMDSTSLAFWKKPNF----AFTIDYGQKAAMAEIRAARQVAKEI---------GI 53
Query: 72 GEDHILPLAILGDISHSSL-TKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLGIT 129
D I I SSL + ++AM N P+T + P RN + + AA A I
Sbjct: 54 SHDTIA-------IDCSSLGSGDMAMAAPLPNAPSTDWWPFRNQLLITLAAMKAICRNIN 106
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ IG+ ++D S Y D D + I ++ E ++ V P A D+
Sbjct: 107 LLYIGLVKSD-SSYKDGCSDFVDKISRTLSF-QEGNIEVMAP------------AIDMTA 152
Query: 190 QDLVNL------ILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
+LVN+ +L SH+C++ + C C C
Sbjct: 153 AELVNMSKIPRTLLAWSHSCHVSD--------FACGRCRGC 185
>gi|288818720|ref|YP_003433068.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|288788120|dbj|BAI69867.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|308752307|gb|ADO45790.1| Queuosine synthesis [Hydrogenobacter thermophilus TK-6]
Length = 203
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 27/221 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDSL 71
+LFSGG +S+T L L R + V + G+ ++ELE L ++ + SL
Sbjct: 8 VLFSGGVESTTLLYMYLQRKEIVYPVYIKMGESWERLELENAL----RLWQYTKSRYASL 63
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
++ L + G I S + F+P RN+ + A A + +
Sbjct: 64 RPLRVINLQVSGAIRKS-----------PYQVSEIFIPLRNMSLITACALYALSKKVRRL 112
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
IG +PD I+ +E I+ G + ++ P L+K K+ ++ G+
Sbjct: 113 AIG--SLGLYPFPDNSKSYIKELERLISEGSGTAFSIEMPFFGLEK---GKIVKEFYGKV 167
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+L L + +GK+ C C C RQ+ +
Sbjct: 168 PYHLTLSCAMPKKVGKKILH------CGKCIKCKERQEALL 202
>gi|77465652|ref|YP_355155.1| putative ExsB [Rhodobacter sphaeroides 2.4.1]
gi|77390070|gb|ABA81254.1| putative ExsB [Rhodobacter sphaeroides 2.4.1]
Length = 207
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 84/226 (37%), Gaps = 30/226 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
ALL+ SGG DS+T W +R + + FDYGQ CV + L S
Sbjct: 4 ALLMASGGLDSTTVAYWLTERGVQFIPVFFDYGQH---------CVETEWETLKEVLPAS 54
Query: 71 LGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ L S S L + +++D +L +VP R ++F AA A LG
Sbjct: 55 AAHPERNDISDLFRGSKSRLITEADLWNEEVKDEDL---YVPYRTLLFYSAAAARAQTLG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ G ++ + DC + + ++ + P+ +L + W ++
Sbjct: 112 AFEVYTGFINSNRAKEIDCTAEFMNKLDALTD--------SVGPVRFLSPFRFWSKSEVA 163
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + + +C C +CP C R E
Sbjct: 164 KESIRLGVPIGRTFSCQAASL-------MPCGACPNCVERLAALRE 202
>gi|163781921|ref|ZP_02176921.1| hypothetical protein HG1285_03523 [Hydrogenivirga sp. 128-5-R1-1]
gi|159883141|gb|EDP76645.1| hypothetical protein HG1285_03523 [Hydrogenivirga sp. 128-5-R1-1]
Length = 203
Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
+P RNI ++ A AY GI + +G +PD D + +E I+ G +++
Sbjct: 81 IPLRNITLVMGAVVHAYVKGIRKVALG--SLGIYPFPDNNRDYLDRLEALISEGARENIS 138
Query: 168 VHTPLMWLKKYET 180
+ TP M ++K+E
Sbjct: 139 LETPFMGMEKWEV 151
>gi|327396048|dbj|BAK13470.1| protein HI1472 precursor FecB [Pantoea ananatis AJ13355]
Length = 348
Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH--ILP----LAILG 83
DR DRV L Q + L +L KIV ++ WK LG+++ ++P A+LG
Sbjct: 31 DRVDRVVVL-----QHQTLNLLVQLNATDKIVGILANWKQQLGDNYATLVPELTHKALLG 85
Query: 84 DISHSSLTKNVAMKIQ 99
D++H L K VA+ Q
Sbjct: 86 DLTHVDLEKLVALHPQ 101
>gi|291615783|ref|YP_003518525.1| FecB [Pantoea ananatis LMG 20103]
gi|291150813|gb|ADD75397.1| FecB [Pantoea ananatis LMG 20103]
Length = 356
Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH--ILP----LAILG 83
DR DRV L Q + L +L KIV ++ WK LG+++ ++P A+LG
Sbjct: 39 DRVDRVVVL-----QHQTLNLLVQLNATDKIVGILANWKQQLGDNYATLVPELTHKALLG 93
Query: 84 DISHSSLTKNVAMKIQ 99
D++H L K VA+ Q
Sbjct: 94 DLTHVDLEKLVALHPQ 109
>gi|188581765|ref|YP_001925210.1| ExsB family protein [Methylobacterium populi BJ001]
gi|179345263|gb|ACB80675.1| ExsB family protein [Methylobacterium populi BJ001]
Length = 210
Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 83/218 (38%), Gaps = 36/218 (16%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDSL 71
LL SGG DS+ +W R D L+ DYGQR K E+ V ++ L
Sbjct: 4 LLLSGGLDSAAIAAW--QRPD--VCLTVDYGQRPAKGEIAAADSVARE-----------L 48
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
G H + D+S L D + P RN + + A G+T I
Sbjct: 49 GLRHEIARV---DLSALGLGPLAGRAASDLARAPEWWPYRNQMLVTLAGMRFVAEGLTEI 105
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
++G TD + D R +R ++ ++L E V V P L E + +
Sbjct: 106 LLGAIRTDV--HADGRAPFLRTVDRLMHL-QEGGVRVMAPARHLSALELVRRS------G 156
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ +L + +C++ + Y C C C Q+
Sbjct: 157 IPRSLLGATFSCHVME--------YACGRCRGCEKHQE 186
>gi|115375767|ref|ZP_01463020.1| ExsB superfamily [Stigmatella aurantiaca DW4/3-1]
gi|310824072|ref|YP_003956430.1| exoenzyme s synthesis protein b/queuosine synthesis family protein
[Stigmatella aurantiaca DW4/3-1]
gi|115367241|gb|EAU66223.1| ExsB superfamily [Stigmatella aurantiaca DW4/3-1]
gi|309397144|gb|ADO74603.1| Exoenzyme S synthesis protein B/queuosine synthesis family protein
[Stigmatella aurantiaca DW4/3-1]
Length = 198
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 35/213 (16%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LL SGG DS W L+ DYGQR+ + + ++G
Sbjct: 5 LLLSGGMDSIAIAWWRRPEL----ALTVDYGQRSALAELRAAASAAE----------AMG 50
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLGITNI 131
+H+ A L + + + + P T + P RN + + AA A G+ +
Sbjct: 51 IEHLTVEADLSALGSGDMAGAEPLSLA----PVTEWWPFRNQMLVTLAAMKAVAHGVQRL 106
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
+IG +TD + D R D + A++ + L E + + P + L E I +
Sbjct: 107 LIGTLKTD-GLHADGRPDFVMALDALLRL-QEGGLRLEAPAIALTSAEL------IRTSN 158
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
+ +L +H+C++G + C C C
Sbjct: 159 IPMEVLAWAHSCHVGI--------HACGQCRGC 183
>gi|283781954|ref|YP_003372709.1| ExsB family protein [Pirellula staleyi DSM 6068]
gi|283440407|gb|ADB18849.1| ExsB family protein [Pirellula staleyi DSM 6068]
Length = 236
Score = 38.1 bits (87), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 107 FVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
++PGRN + LV AA GI + + S + D + ++A+N G S V
Sbjct: 101 YLPGRNALLLVKAAVYCQLHGIGQLACAPLGS--SPFEDASSEFFTEYQSAMNRGSSSPV 158
Query: 167 TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
+ P L K E +L V L LE + +C + D G C +C C+
Sbjct: 159 VLLRPFGELHKEEVMRLG--------VGLPLELTFSC-IHPVD-----GTHCGTCNKCFE 204
Query: 227 RQKGW 231
R++ +
Sbjct: 205 RKEAF 209
>gi|200388416|ref|ZP_03215028.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199605514|gb|EDZ04059.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 350
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 39 DTVDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H L K VA+ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDLEKLVALHPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDIAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 QAKMNPTLADEEQAYNRGLREGITL 169
>gi|168231734|ref|ZP_02656792.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472192|ref|ZP_03078176.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194458556|gb|EDX47395.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205333877|gb|EDZ20641.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 350
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI------LPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ ++ A LG
Sbjct: 39 DTVDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYVRLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDPEKLVALRPQVAFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDIAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 QAKMNPTLADEEQAYNRGLREGITL 169
>gi|30249408|ref|NP_841478.1| argininosuccinate synthase [Nitrosomonas europaea ATCC 19718]
gi|34921586|sp|Q82UP5|ASSY_NITEU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|30138771|emb|CAD85348.1| Argininosuccinate synthase [Nitrosomonas europaea ATCC 19718]
Length = 404
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K A+L FSGG D+S L W D + V T + D GQ ++E V+ I E+
Sbjct: 1 MDKVKKAVLAFSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEIEPARAKAVQFGIREI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 FIEDLREEFVRDYVFPM 77
>gi|213161314|ref|ZP_03347024.1| ABC transporter periplasmic-binding protein [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
Length = 350
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 39 DTLDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDPEKLVALRPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDVAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 QAKMNPTLADEEQAYNRGLREGITL 169
>gi|16761920|ref|NP_457537.1| ABC transporter periplasmic-binding protein [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|29143407|ref|NP_806749.1| ABC transporter periplasmic-binding protein [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|289825349|ref|ZP_06544593.1| ABC transporter periplasmic-binding protein [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|25512806|pir||AF0884 probable ABC-transport protein, periplasmic-binding component
STY3313 [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16504222|emb|CAD02974.1| possible ABC-transport protein, periplasmic-binding component
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29139041|gb|AAO70609.1| possible ABC-transport protein, periplasmic-binding component
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
Length = 350
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 39 DTLDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDPEKLVALRPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDVAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 QAKMNPTLADEEQAYNRGLREGITL 169
>gi|168819803|ref|ZP_02831803.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205343299|gb|EDZ30063.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320087591|emb|CBY97355.1| Uncharacterized protein HI1472 Flags: Precursor [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 350
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 39 DTVDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDPEKLVALRPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDVAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 QAKMNPTLADEEQAYNRGLREGITL 169
>gi|254492519|ref|ZP_05105691.1| argininosuccinate synthase [Methylophaga thiooxidans DMS010]
gi|224462411|gb|EEF78688.1| argininosuccinate synthase [Methylophaga thiooxydans DMS010]
Length = 403
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S L W D++D V T + D GQ +VE I E+
Sbjct: 1 MSKINKVVLAYSGGLDTSVILKWLQDKYDSEVVTFTADLGQGEEVEPARAKAKSLGIKEI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 FIEDLREEFARDYVFPM 77
>gi|238909942|ref|ZP_04653779.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 350
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 39 DTVDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDPEKLVALRPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDIAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 QAKMNPTLADEEQAYNRGLREGITL 169
>gi|16766442|ref|NP_462057.1| periplasmic ferrichrome-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167990316|ref|ZP_02571416.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168242961|ref|ZP_02667893.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168262907|ref|ZP_02684880.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168463657|ref|ZP_02697574.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194448022|ref|YP_002047137.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197263909|ref|ZP_03163983.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|16421696|gb|AAL22016.1| putative ferrichrome-binding periplasmic protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|194406326|gb|ACF66545.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|195633542|gb|EDX51956.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197242164|gb|EDY24784.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|205331093|gb|EDZ17857.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205337835|gb|EDZ24599.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205348471|gb|EDZ35102.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|261248272|emb|CBG26109.1| possible ABC-transport protein, periplasmic-binding component
[Salmonella enterica subsp. enterica serovar Typhimurium
str. D23580]
gi|267995324|gb|ACY90209.1| putative periplasmic ferrichrome-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301159696|emb|CBW19215.1| possible ABC-transport protein, periplasmic-binding component
[Salmonella enterica subsp. enterica serovar Typhimurium
str. SL1344]
gi|312914166|dbj|BAJ38140.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225819|gb|EFX50873.1| putative ABC-transport protein, periplasmic-binding component
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|323131499|gb|ADX18929.1| putative periplasmic ferrichrome-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|332990007|gb|AEF08990.1| putative periplasmic ferrichrome-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 350
Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 39 DTVDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDPEKLVALRPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDIAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 QAKMNPTLADEEQAYNRGLREGITL 169
>gi|237653771|ref|YP_002890085.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thauera sp. MZ1T]
gi|237625018|gb|ACR01708.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thauera sp. MZ1T]
Length = 351
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET--LSFDYGQRNKVEL 50
+ K AP ALL +GG S+ S LD + +T ++ YGQRN+ EL
Sbjct: 200 VRKSAPEALLFMAGGSGLSSPRSMILDLLEAGDTRQMTLVYGQRNRAEL 248
>gi|114332031|ref|YP_748253.1| argininosuccinate synthase [Nitrosomonas eutropha C91]
gi|122313270|sp|Q0AEE4|ASSY_NITEC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|114309045|gb|ABI60288.1| argininosuccinate synthase [Nitrosomonas eutropha C91]
Length = 404
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K A+L FSGG D+S L W D + V T + D GQ ++E ++ I E+
Sbjct: 1 MDKVKKAVLAFSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEIEPARAKALQFGIKEI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 FIEDLREEFVRDYVFPM 77
>gi|205354060|ref|YP_002227861.1| ABC transporter periplasmic-binding component [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|207858401|ref|YP_002245052.1| ABC transporter periplasmic-binding component [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|205273841|emb|CAR38840.1| possible ABC-transport protein, periplasmic-binding component
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|206710204|emb|CAR34561.1| possible ABC-transport protein, periplasmic-binding component
[Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|326629176|gb|EGE35519.1| putative ABC-transport protein, periplasmic-binding component
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 350
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 39 DTVDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDPEKLVALRPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDVAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 RAKMNPTLADEEQAYNRGLREGITL 169
>gi|62181653|ref|YP_218070.1| putative ferrichrome-binding periplasmic protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|224584938|ref|YP_002638737.1| ABC transporter periplasmic-binding protein [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|62129286|gb|AAX66989.1| putative ferrichrome-binding periplasmic protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|224469466|gb|ACN47296.1| possible ABC-transport protein, periplasmic-binding component
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|322716137|gb|EFZ07708.1| putative ferrichrome-binding periplasmic protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 350
Score = 36.2 bits (82), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 39 DTVDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDPEKLVALRPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDVAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 RAKMNPTLADEEQAYNRGLREGITL 169
>gi|323527176|ref|YP_004229329.1| argininosuccinate synthase [Burkholderia sp. CCGE1001]
gi|323384178|gb|ADX56269.1| argininosuccinate synthase [Burkholderia sp. CCGE1001]
Length = 408
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M+DI K +L +SGG D+S L W D +D V T + D GQ ++E RKK
Sbjct: 1 MSDIKK----VVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-----PARKK 51
Query: 60 IVELMPKWKDSLGED 74
++L K ++ ED
Sbjct: 52 ALQLGIKQENIFIED 66
>gi|298717395|ref|YP_003730037.1| ABC transport system periplasmic binding protein [Pantoea vagans
C9-1]
gi|298361584|gb|ADI78365.1| putative ABC transport system, periplasmic binding protein [Pantoea
vagans C9-1]
Length = 349
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH--ILP----LAILG 83
D DR+ L Q + L ++ KIV +M WK LG+ + + P +A LG
Sbjct: 38 DHVDRIVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELNHMATLG 92
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA+ Q + N + P I + LGI + I + D G
Sbjct: 93 DLTHVDPEKLVALHPQVVFITN-YAPHEMIDSIT-------ALGIPVVAISL-RHDLPGE 143
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
D + T+ E A + G+ +T+
Sbjct: 144 QDKMNPTLSDEEMAYDKGLREGITL 168
>gi|57242597|ref|ZP_00370534.1| argininosuccinate synthase [Campylobacter upsaliensis RM3195]
gi|57016526|gb|EAL53310.1| argininosuccinate synthase [Campylobacter upsaliensis RM3195]
Length = 406
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M D +KKA +L +SGG D+S L W D + V T + D GQ ++E +
Sbjct: 1 MKDKVKKA---VLAYSGGLDTSIILKWLQDEYGCEVVTFTADIGQGEELEPARLKALSLG 57
Query: 60 IVE---LMPKWKDSLGEDHILPL 79
I E + KD +D++ P+
Sbjct: 58 IKEENIFIKDLKDEFVKDYVFPM 80
>gi|325981798|ref|YP_004294200.1| argininosuccinate synthase [Nitrosomonas sp. AL212]
gi|325531317|gb|ADZ26038.1| argininosuccinate synthase [Nitrosomonas sp. AL212]
Length = 404
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
+KK A+L FSGG D+S L W D + V T + D GQ +VE
Sbjct: 1 MKKINKAVLAFSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEVE 46
>gi|302782808|ref|XP_002973177.1| hypothetical protein SELMODRAFT_413687 [Selaginella moellendorffii]
gi|300158930|gb|EFJ25551.1| hypothetical protein SELMODRAFT_413687 [Selaginella moellendorffii]
Length = 211
Score = 35.8 bits (81), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG------CNSCPACYLRQKGWMEFK 235
QD L+ S+T G+RD R G+G SCPAC LR++ W+ K
Sbjct: 119 QDHNESSTQPLLALSSYTDDQGRRDLRLYVGFGYRIAPLLQSCPACLLRRQSWLTLK 175
>gi|255021579|ref|ZP_05293622.1| Archaeosine biosynthesis protein queC [Acidithiobacillus caldus
ATCC 51756]
gi|254968967|gb|EET26486.1| Archaeosine biosynthesis protein queC [Acidithiobacillus caldus
ATCC 51756]
Length = 206
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 38/231 (16%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+LLL SGG +S T L+ A + DYGQR E R+ + + L
Sbjct: 7 SLLLCSGGVESFT-LTHAFGTDSGLYLFFLDYGQRAAAEEWKRVQNLARNLRL------- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
E L GD ++ Q ++P P RN++ + AA +A LG
Sbjct: 59 --ERERFDLRDFGDAVGR-------LRPQRYHVP---TPHRNLLAVAAAANVAESLGRNT 106
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-VTVHTPLMWLKKYETWKLAQDIGG 189
+V+G D G D + RA +A+ + S + + PL +K +L QD+G
Sbjct: 107 VVLGTTADD--GRTD--RNANRAFLSALAATLSSSGLYLALPLAQYRKAAVIRLGQDLG- 161
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ E S++C +G + C CP C R++ + E ++D
Sbjct: 162 -----VPWEMSYSCIVGYEAQ-------CGRCPQCIRRREAFREAGLSHRD 200
>gi|254468020|ref|ZP_05081426.1| argininosuccinate synthase [beta proteobacterium KB13]
gi|207086830|gb|EDZ64113.1| argininosuccinate synthase [beta proteobacterium KB13]
Length = 404
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K +L +SGG D+S L W +++D V T + D GQ ++E + I E+
Sbjct: 1 MKSIKKVVLAYSGGLDTSVILKWLQEKYDCEVVTFTADIGQGEEIEPAREKAKQAGIKEI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ +++I P+
Sbjct: 61 YIENLEEDFAKNYIFPM 77
>gi|134299609|ref|YP_001113105.1| exsB protein [Desulfotomaculum reducens MI-1]
gi|172044293|sp|A4J5C7|QUEC_DESRM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|134052309|gb|ABO50280.1| exsB protein [Desulfotomaculum reducens MI-1]
Length = 228
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 87/228 (38%), Gaps = 36/228 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-------ELECRLCVRKKIVE 62
++++L SGG DS+ L++A + L+ +Y QR +L + +++E
Sbjct: 2 NSVVLLSGGLDSAVNLAFARTEGNVKLALTINYRQRAAHKEIAAAAQLARYYAIPHRVIE 61
Query: 63 LMPKWKDSLGEDHI------LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
L W + + + LP ++ L A ++ +VP RN +F+
Sbjct: 62 L--PWLAEITKTALVRSESQLPEPKTEELDQLELAGKTAAEV--------WVPNRNGLFV 111
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
AA A L +V G + + +PD + A A+ + V V + L
Sbjct: 112 NIAACFAETLHCEIVVAGFNCEEAATFPDNTPEFALAASAAMQYSTANQVKVLSYTGRLN 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
K + L Q + L E +CY G+ C C +C
Sbjct: 172 KKDIVALGQRL------QLPWELIWSCYRGE-------ALMCGKCESC 206
>gi|170693516|ref|ZP_02884675.1| Argininosuccinate synthase [Burkholderia graminis C4D1M]
gi|170141671|gb|EDT09840.1| Argininosuccinate synthase [Burkholderia graminis C4D1M]
Length = 408
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M+DI K +L +SGG D+S L W D +D V T + D GQ ++E RKK
Sbjct: 1 MSDIKK----VVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-----PARKK 51
Query: 60 IVELMPKWKDSLGED 74
++L K + ED
Sbjct: 52 ALQLGIKQDNIFIED 66
>gi|91785024|ref|YP_560230.1| argininosuccinate synthase [Burkholderia xenovorans LB400]
gi|119361260|sp|Q13UR1|ASSY_BURXL RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|91688978|gb|ABE32178.1| argininosuccinate synthase [Burkholderia xenovorans LB400]
Length = 408
Score = 35.4 bits (80), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M+DI K +L +SGG D+S L W D +D V T + D GQ ++E RKK
Sbjct: 1 MSDIKK----VVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-----PARKK 51
Query: 60 IVELMPKWKDSLGED 74
++L K ++ ED
Sbjct: 52 ALQLGIKPENIFIED 66
>gi|187925180|ref|YP_001896822.1| argininosuccinate synthase [Burkholderia phytofirmans PsJN]
gi|229889864|sp|B2SY63|ASSY_BURPP RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|187716374|gb|ACD17598.1| Argininosuccinate synthase [Burkholderia phytofirmans PsJN]
Length = 408
Score = 35.4 bits (80), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M+DI K +L +SGG D+S L W D +D V T + D GQ ++E RKK
Sbjct: 1 MSDIKK----VVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-----PARKK 51
Query: 60 IVELMPKWKDSLGED 74
++L K + ED
Sbjct: 52 ALQLGIKQDNIFIED 66
>gi|213580349|ref|ZP_03362175.1| ABC transporter periplasmic-binding protein [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
Length = 150
Score = 35.4 bits (80), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 20 DTLDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 74
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 75 DLTHVDPEKLVALRPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISLRH-DVAGE 125
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 126 QAKMNPTLADEEQAYNRGLREGITL 150
>gi|307730812|ref|YP_003908036.1| argininosuccinate synthase [Burkholderia sp. CCGE1003]
gi|307585347|gb|ADN58745.1| argininosuccinate synthase [Burkholderia sp. CCGE1003]
Length = 408
Score = 35.4 bits (80), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M+DI K +L +SGG D+S L W D +D V T + D GQ ++E RKK
Sbjct: 1 MSDIKK----VVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-----PARKK 51
Query: 60 IVELMPKWKDSLGED 74
++L K ++ ED
Sbjct: 52 ALQLGIKPENIFIED 66
>gi|194899097|ref|XP_001979099.1| GG10357 [Drosophila erecta]
gi|190650802|gb|EDV48057.1| GG10357 [Drosophila erecta]
Length = 419
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR---KKIVELMPK 66
+ +L +SGG D+S L W LD+ V + D GQ+ + ++ KK++ +
Sbjct: 5 TVILAYSGGLDTSCILKWLLDKHFEVVCVLADVGQKEDFTAAEKKALKIGAKKVI--LAD 62
Query: 67 WKDSLGEDHILPLAILG 83
K S ED+I P +G
Sbjct: 63 VKQSFVEDYIWPAVQMG 79
>gi|157167846|ref|XP_001662429.1| hypothetical protein AaeL_AAEL012325 [Aedes aegypti]
gi|108871287|gb|EAT35512.1| conserved hypothetical protein [Aedes aegypti]
Length = 1865
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 74 DHILPLAILGDISHSSLT--KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ IL L +LG+ + S LT +NVA P+ +VP R ++ ++ + R +T
Sbjct: 468 NQILLLGLLGEKAESKLTIVQNVASVFLMTCFPDYYVPSRYLLLIICGQSAQLREMMTTY 527
Query: 132 VIGVCETDYSGY 143
+ GV + D+ Y
Sbjct: 528 LYGVSKKDHINY 539
>gi|152993271|ref|YP_001358992.1| argininosuccinate synthase [Sulfurovum sp. NBC37-1]
gi|187470632|sp|A6QAX6|ASSY_SULNB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|151425132|dbj|BAF72635.1| argininosuccinate synthase [Sulfurovum sp. NBC37-1]
Length = 447
Score = 35.0 bits (79), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
+K A+L +SGG D+S L W D ++ V T + D GQ +VE
Sbjct: 4 RKISKAVLAYSGGLDTSIILKWLQDEYECEVVTFTADLGQGEEVE 48
>gi|225848405|ref|YP_002728568.1| argininosuccinate synthase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643412|gb|ACN98462.1| argininosuccinate synthase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 399
Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWKDS 70
+L +SGG D+S + W DR V T + D GQ ++ E+E + + ++ K+
Sbjct: 6 VLAYSGGLDTSVIVRWLTDRGFEVITYTADVGQGEELSEIEEKALKAGAVKAIIDDIKEE 65
Query: 71 LGEDHILPL 79
D+ +PL
Sbjct: 66 FARDYCMPL 74
>gi|296273180|ref|YP_003655811.1| argininosuccinate synthase [Arcobacter nitrofigilis DSM 7299]
gi|296097354|gb|ADG93304.1| argininosuccinate synthase [Arcobacter nitrofigilis DSM 7299]
Length = 414
Score = 35.0 bits (79), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
K+ +L +SGG D+ST L W D ++ V T + D GQ +VE
Sbjct: 4 KEVKKVVLAYSGGLDTSTILKWLQDEYNAEVITFTADLGQGEEVE 48
>gi|296157213|ref|ZP_06840049.1| argininosuccinate synthase [Burkholderia sp. Ch1-1]
gi|295892549|gb|EFG72331.1| argininosuccinate synthase [Burkholderia sp. Ch1-1]
Length = 408
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M+DI K +L +SGG D+S L W D +D V T + D GQ ++E RKK
Sbjct: 1 MSDIKK----VVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-----PARKK 51
Query: 60 IVEL 63
++L
Sbjct: 52 ALQL 55
>gi|161616122|ref|YP_001590087.1| hypothetical protein SPAB_03924 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161365486|gb|ABX69254.1| hypothetical protein SPAB_03924 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 350
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + LG
Sbjct: 39 DTVDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKVSLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H K VA++ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDPEKLVALRPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDVAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N G+ +T+
Sbjct: 145 QAKMNPTLADEEQAYNRGLREGITL 169
>gi|194442766|ref|YP_002042406.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194401429|gb|ACF61651.1| periplasmic binding protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 350
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 20/145 (13%)
Query: 30 DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH------ILPLAILG 83
D DRV L Q + L ++ KIV +M WK LG+ + + A LG
Sbjct: 39 DTVDRVVVL-----QHQTLNLLVQMNATDKIVGVMANWKQQLGDGYARLAPELAQKASLG 93
Query: 84 DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
D++H L K VA+ Q + N + P I + RLGI + I + D +G
Sbjct: 94 DLTHVDLEKLVALHPQVVFVTN-YAPQEMIDKI-------SRLGIPVVAISL-RHDIAGE 144
Query: 144 PDCRHDTIRAIETAINLGMESHVTV 168
+ T+ E A N + +T+
Sbjct: 145 QAKMNPTLADEEQAYNRELREGITL 169
Searching..................................................done
Results from round 2
>gi|254781031|ref|YP_003065444.1| exsB protein [Candidatus Liberibacter asiaticus str. psy62]
gi|254040708|gb|ACT57504.1| exsB protein [Candidatus Liberibacter asiaticus str. psy62]
Length = 240
Score = 371 bits (952), Expect = e-101, Method: Composition-based stats.
Identities = 240/240 (100%), Positives = 240/240 (100%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI
Sbjct: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA
Sbjct: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET
Sbjct: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD
Sbjct: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
>gi|315122371|ref|YP_004062860.1| exsB protein [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495773|gb|ADR52372.1| exsB protein [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 243
Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats.
Identities = 195/239 (81%), Positives = 219/239 (91%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN+ +K SALLLFSGGQDSSTCLSWALD+FD+VETLSFDYGQRNKVELECRL +R+KI
Sbjct: 1 MNNNREKTSSALLLFSGGQDSSTCLSWALDKFDKVETLSFDYGQRNKVELECRLRLREKI 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
V+L PKWKDSLG DHILPLA LGDISHSSLTKN+ +KIQ+NNLPNTFVPGRNIIFLVFAA
Sbjct: 61 VQLTPKWKDSLGADHILPLATLGDISHSSLTKNIEIKIQENNLPNTFVPGRNIIFLVFAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GITNI+ G+CE DYSGYPDCR++TI+A+E +NLGMES+ T+HTPLM LKK+ET
Sbjct: 121 ALAYRRGITNIIAGMCEMDYSGYPDCRNETIKALEMTLNLGMESNFTIHTPLMHLKKHET 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
WKL QDIGGQ+LV+LILEESHTCYLG RDKRYEWGYGCNSCP+C LRQKGW+EFKEKYQ
Sbjct: 181 WKLVQDIGGQNLVDLILEESHTCYLGTRDKRYEWGYGCNSCPSCNLRQKGWVEFKEKYQ 239
>gi|114321844|ref|YP_743527.1| exsB protein [Alkalilimnicola ehrlichii MLHE-1]
gi|122310729|sp|Q0A550|QUEC_ALHEH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114228238|gb|ABI58037.1| preQ(0) biosynthesis protein QueC [Alkalilimnicola ehrlichii
MLHE-1]
Length = 238
Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats.
Identities = 134/235 (57%), Positives = 179/235 (76%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M++ +A++LFSGGQDS+TCL+WAL R+ RV T++FDYGQR++VEL CR VR+ I
Sbjct: 1 MSETADTNQTAVVLFSGGQDSTTCLAWALARYHRVHTVAFDYGQRHRVELACRQRVREAI 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ W LGEDH+L L LG+IS +SLT+ A++I+D+ LP+TFVPGRN++FL +AA
Sbjct: 61 GQHFAGWGARLGEDHLLDLTSLGEISDTSLTRERAIEIRDSGLPDTFVPGRNLLFLTYAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA+RL +++ GVCETDYSGYPDCR DTI+A++ A+NLGM+SH +HTPLMW K +T
Sbjct: 121 ALAWRLQARHLITGVCETDYSGYPDCRDDTIKALQVALNLGMDSHFVLHTPLMWRDKAQT 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
W LA+ +GG DLV LI E +HTCYLG R +R++WGYGC CPAC LR +GW +
Sbjct: 181 WALAETLGGADLVELIAEHTHTCYLGDRTQRHDWGYGCGECPACRLRAQGWRRHR 235
>gi|158425299|ref|YP_001526591.1| ExsB protein [Azorhizobium caulinodans ORS 571]
gi|189038893|sp|A8IMX7|QUEC_AZOC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|158332188|dbj|BAF89673.1| ExsB protein [Azorhizobium caulinodans ORS 571]
Length = 241
Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats.
Identities = 134/238 (56%), Positives = 182/238 (76%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ AL+LFSGGQDS+T L+WALDRF+RVETL FDYGQR+++EL+CR+ VR +
Sbjct: 1 MSADAGPGSGALVLFSGGQDSTTTLAWALDRFERVETLGFDYGQRHRIELDCRVKVRAAM 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L P W LGEDH L L LG +S ++LT++VA+++ + LPNTFVPGRNI+FL FAA
Sbjct: 61 AALNPAWAAKLGEDHTLALDALGAVSDTALTRDVAIEMTEGGLPNTFVPGRNIVFLTFAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR G+ +IV G+CETD+SGYPDCR DTI+A++ A+NLGM+ + TPLMW+ K ET
Sbjct: 121 ALAYRRGLKHIVGGMCETDFSGYPDCRDDTIKALQVALNLGMDRRFVLETPLMWIDKAET 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
W+LA+ +GG+ LV+LI+E++HTCYLG+R R+ WG+GC +CPAC LR +G+ ++
Sbjct: 181 WRLAERLGGRALVDLIVEDTHTCYLGERGPRHPWGHGCGTCPACQLRAEGFARYEAAR 238
>gi|48428738|gb|AAT42387.1| putative PP-loop superfamily ATPase [Collimonas fungivorans Ter331]
Length = 236
Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats.
Identities = 125/232 (53%), Positives = 179/232 (77%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A++LFSGGQDS+TCL+WAL R++RVET+ FDYGQR+ VEL R + +KI
Sbjct: 1 MTTPNGAIVLFSGGQDSTTCLAWALSRYERVETIGFDYGQRHAVELTVRPVLLQKIRAQF 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P+W LGEDH++ L+++ IS +++T++V + +Q+N LPNTFVPGRN++F+ AAT+AY
Sbjct: 61 PQWAGKLGEDHLIDLSLISKISSTAMTEDVEIVMQENGLPNTFVPGRNLLFMTVAATVAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +V G+CETD+SGYPDCR DT++A++ A+NLGM + + + TPLMW+ K ETWKLA
Sbjct: 121 RRGLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQIKLETPLMWIDKSETWKLA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
QD+GG LV+LI ++HTCYLG+R ++WGYGC +CPAC LR +G+ +F+
Sbjct: 181 QDLGGDALVDLIRADTHTCYLGQRGALHDWGYGCGTCPACALRARGYQQFRS 232
>gi|295675133|ref|YP_003603657.1| exsB protein [Burkholderia sp. CCGE1002]
gi|295434976|gb|ADG14146.1| exsB protein [Burkholderia sp. CCGE1002]
Length = 270
Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats.
Identities = 124/229 (54%), Positives = 174/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WALDR+D VET+ FDYGQR++VELECR R+ +V P W
Sbjct: 34 KRSALVLFSGGQDSATCLAWALDRYDTVETIGFDYGQRHRVELECREGFRQAVVRAFPAW 93
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LG+DH + L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 94 ADRLGDDHTIDLSLLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRG 153
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA ++
Sbjct: 154 LQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFALETPLMWLDKADTWRLAHEL 213
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG LV L+ E+HTCYLG+R + + WG+GC CPAC LR++G+ +
Sbjct: 214 GGDALVELVRVETHTCYLGERAELHSWGFGCGECPACRLRKRGYEAYLA 262
>gi|239814070|ref|YP_002942980.1| exsB protein [Variovorax paradoxus S110]
gi|239800647|gb|ACS17714.1| exsB protein [Variovorax paradoxus S110]
Length = 237
Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats.
Identities = 128/233 (54%), Positives = 171/233 (73%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +AL+LFSGGQDS+TCL+ AL ++ RVETL FDYGQR++VEL+ R + ++ E
Sbjct: 1 MPLHTTALVLFSGGQDSTTCLAEALSKYQRVETLGFDYGQRHRVELDVRGTILARMRERF 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P W LGEDH+L LA L + SSLT+ VA ++Q + LPNTFVPGRN++FL A LAY
Sbjct: 61 PDWAPRLGEDHVLTLAALAQLGGSSLTEEVAFEMQADGLPNTFVPGRNLLFLTLAGALAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ IV GVCETD+SGYPDCR DT++A++ A++LG+E + + TPLMW+ K ETW++A
Sbjct: 121 RRGLQVIVTGVCETDFSGYPDCRDDTVKAMQLALSLGLERRLVIETPLMWIDKAETWQMA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+GG+ LV LI+EE+HTCYLG R+ R WGYGC CPAC LR+ GW + +
Sbjct: 181 HRLGGEPLVELIVEETHTCYLGDREHRQAWGYGCGECPACELRKNGWERYASR 233
>gi|118574282|sp|Q146Z6|QUEC_BURXL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 243
Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats.
Identities = 124/229 (54%), Positives = 175/229 (76%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R +V P W
Sbjct: 7 KRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVVRAFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LGEDH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 ADRLGEDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA ++
Sbjct: 127 LQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFLLETPLMWLDKADTWRLAHEL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG +LV L+ E+HTCYLG+R + + WG+GC CPAC LR++G+ +
Sbjct: 187 GGAELVELVRVETHTCYLGERAELHAWGFGCGECPACRLRKRGYEAYLA 235
>gi|296161370|ref|ZP_06844177.1| exsB protein [Burkholderia sp. Ch1-1]
gi|295888356|gb|EFG68167.1| exsB protein [Burkholderia sp. Ch1-1]
Length = 243
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 122/229 (53%), Positives = 174/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R + P W
Sbjct: 7 KRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVARAFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LGEDH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 AERLGEDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA ++
Sbjct: 127 LQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFLLETPLMWLDKADTWRLAHEL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG +LV L+ E+HTCYLG+R + + WG+GC CPAC LR++G+ +
Sbjct: 187 GGAELVELVRVETHTCYLGERAELHAWGFGCGECPACRLRKRGYEAYLA 235
>gi|170744632|ref|YP_001773287.1| exsB protein [Methylobacterium sp. 4-46]
gi|168198906|gb|ACA20853.1| exsB protein [Methylobacterium sp. 4-46]
Length = 233
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 139/232 (59%), Positives = 184/232 (79%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL+LFSGGQDS+TCL+WALDRF RVETL FDYGQR++VEL+CR +R + L
Sbjct: 1 MTVDEGALVLFSGGQDSTTCLAWALDRFARVETLGFDYGQRHRVELDCRDRLRAGLAALK 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P+W LGEDH LPL +LGDIS ++LT++ A+ + ++ LPNTFVPGRN++FL FAA LAY
Sbjct: 61 PEWARRLGEDHTLPLGVLGDISETALTRDGAIALAESGLPNTFVPGRNLVFLTFAAALAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +++ G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K ETW+LA
Sbjct: 121 RRGLRHLIGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAETWRLA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+D+GG+ LV+LI+E+SHTCYLG+R R+ WG GC +CPAC LR+ G+ F+
Sbjct: 181 RDLGGEALVDLIVEDSHTCYLGERGARHAWGRGCGTCPACRLREAGYARFRA 232
>gi|160896707|ref|YP_001562289.1| exsB protein [Delftia acidovorans SPH-1]
gi|160362291|gb|ABX33904.1| exsB protein [Delftia acidovorans SPH-1]
Length = 252
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 125/233 (53%), Positives = 176/233 (75%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ +AL+LFSGGQDS+TCL+ AL ++RVETL FDYGQR+ VE++ R VR+++ P+
Sbjct: 17 RHTAALVLFSGGQDSTTCLAQALSLYERVETLGFDYGQRHSVEMQVRQQVRERLSRDFPQ 76
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LG+DH+L L +L I SSLT++VA +Q + LPNTFVPGRN++FL A LAYR
Sbjct: 77 WAPRLGDDHVLSLDVLQQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRR 136
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G++ IV GVCETDYSGYPDCR DT++A++ A+NLG+E + + TPLMW+ K +TW++A D
Sbjct: 137 GLSVIVTGVCETDYSGYPDCRDDTMKAMQLALNLGLERRLRIETPLMWIDKAQTWQMAHD 196
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+GG LV+LI ++HTCY G R+ ++WGYGC +CPAC LR +GW +++ + +
Sbjct: 197 LGGDTLVDLIQRDTHTCYQGTRETLHDWGYGCGTCPACDLRARGWHQWQAQRE 249
>gi|209515826|ref|ZP_03264688.1| exsB protein [Burkholderia sp. H160]
gi|209503674|gb|EEA03668.1| exsB protein [Burkholderia sp. H160]
Length = 243
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 122/229 (53%), Positives = 173/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WALDR+D VET+ FDYGQR++VELECR R+ +V P W
Sbjct: 7 KRSALVLFSGGQDSATCLAWALDRYDTVETIGFDYGQRHRVELECREGFRQAVVRAFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 ADRLGDDHMIDLSLLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ +NLGM+ + TPLMWL K +TW+LA ++
Sbjct: 127 LQVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMDKRFALETPLMWLDKADTWRLAHEL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+ +
Sbjct: 187 GGDALVELVRVETHTCYVGERAELHSWGFGCGECPACRLRKRGYEAYLA 235
>gi|186474814|ref|YP_001856284.1| exsB protein [Burkholderia phymatum STM815]
gi|254764315|sp|B2JJV1|QUEC_BURP8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|184191273|gb|ACC69238.1| exsB protein [Burkholderia phymatum STM815]
Length = 243
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 124/232 (53%), Positives = 175/232 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WALDR++ VETL FDYGQR++VELECR R + P+W
Sbjct: 7 KSSALVLFSGGQDSATCLAWALDRYETVETLGFDYGQRHRVELECREGFRSAVARTFPEW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LG+DH++ L++LG IS +++T+ + + N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 GERLGDDHMIDLSVLGSISETAMTREIEIHAASNGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM+S + TPLMW+ K +TW+LA ++
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFVLETPLMWIDKADTWRLAHEL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
GG +LV LI E+HTCYLG+R + + WG+GC CPAC LR++G+ + Q
Sbjct: 187 GGDELVELIRVETHTCYLGERAELHAWGFGCGECPACRLRKRGYEAYLSGEQ 238
>gi|300313463|ref|YP_003777555.1| PP-loop superfamily ATPase [Herbaspirillum seropedicae SmR1]
gi|300076248|gb|ADJ65647.1| PP-loop superfamily ATPase protein [Herbaspirillum seropedicae
SmR1]
Length = 263
Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats.
Identities = 123/230 (53%), Positives = 175/230 (76%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WAL R+ RVET+ FDYGQR+ +EL R + +++ P W
Sbjct: 30 TQSALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELAVRPALLERMRAFSPDW 89
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LGEDH++ L+++G IS ++LT++V + +QDN LPNTFVPGRN++F+ AATLAYR G
Sbjct: 90 QTRLGEDHMIDLSLIGKISDTALTRDVEIAMQDNGLPNTFVPGRNLLFMTVAATLAYRRG 149
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM + + V TPLMW+ K TW LA+ +
Sbjct: 150 LNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAGTWALAELL 209
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
GG LV+LI ++HTCYLG+R ++WG+GC CPAC LR +G+ ++ +
Sbjct: 210 GGAPLVDLIRTDTHTCYLGERGALHDWGHGCGKCPACELRARGYQQYAAR 259
>gi|237749231|ref|ZP_04579711.1| queuosine biosynthesis protein queC [Oxalobacter formigenes OXCC13]
gi|229380593|gb|EEO30684.1| queuosine biosynthesis protein queC [Oxalobacter formigenes OXCC13]
Length = 246
Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats.
Identities = 122/236 (51%), Positives = 175/236 (74%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N I+ AL+LFSGGQDS+TCL+WAL+ +D+VET+ F YGQR+ VEL R + +KI
Sbjct: 7 NHSIESTKKALVLFSGGQDSTTCLAWALNHYDKVETIGFSYGQRHAVELTVRPGILQKIR 66
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+W LGEDH+ L+++ +S +++T +V +++ +N LPNTFVPGRN++FL+ AA
Sbjct: 67 NFSEEWNKKLGEDHVCDLSLISSLSETAMTSDVEIRMMENGLPNTFVPGRNLMFLMVAAM 126
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LAYR + +V G+CETD+SGYPDCR D I+A++ A+N+GM++ + + TPLMW K ETW
Sbjct: 127 LAYRRDLNVLVGGMCETDFSGYPDCRDDAIKAMQLALNIGMDARLNLVTPLMWKNKKETW 186
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+LA ++GGQ LV+LI+ E+HTCY+G+ DK WG+GC CPAC LR+KG+ EF +
Sbjct: 187 QLAAELGGQGLVDLIVNETHTCYVGEHDKLNTWGFGCGECPACLLRKKGFEEFISR 242
>gi|220926504|ref|YP_002501806.1| exsB protein [Methylobacterium nodulans ORS 2060]
gi|219951111|gb|ACL61503.1| exsB protein [Methylobacterium nodulans ORS 2060]
Length = 233
Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats.
Identities = 136/232 (58%), Positives = 181/232 (78%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
++ + AL+LFSGGQDS+TCL+WAL+RF RVETL FDYGQR++VEL+CR +R + L
Sbjct: 1 METSEGALVLFSGGQDSTTCLAWALERFGRVETLGFDYGQRHRVELDCRDRLRAGLAALD 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P W LG DH LPL +LG+IS ++LT++ A+ + + LPNTFVPGRN++FL FAA LAY
Sbjct: 61 PAWAARLGPDHTLPLGVLGEISETALTRDSAIALAETGLPNTFVPGRNLVFLTFAAALAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +IV G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K TW+LA
Sbjct: 121 RRGLRHIVGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAATWRLA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ +GG+ LV+LI+E+SHTCY G+R +R+ WGYGC +CPAC LR G+ F+
Sbjct: 181 EALGGEALVDLIVEDSHTCYRGERGERHAWGYGCGTCPACELRAAGYARFRA 232
>gi|323524431|ref|YP_004226584.1| exsB protein [Burkholderia sp. CCGE1001]
gi|323381433|gb|ADX53524.1| exsB protein [Burkholderia sp. CCGE1001]
Length = 243
Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats.
Identities = 121/229 (52%), Positives = 174/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R + P W
Sbjct: 7 KRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVARTFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 GERLGDDHMVDLSVLGAISETAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM+S + TPLMWL K +TW+LA ++
Sbjct: 127 LQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFVLETPLMWLDKADTWRLAHEL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG +LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+ +
Sbjct: 187 GGDELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAWLA 235
>gi|264680395|ref|YP_003280305.1| exsB protein [Comamonas testosteroni CNB-2]
gi|262210911|gb|ACY35009.1| exsB protein [Comamonas testosteroni CNB-2]
Length = 253
Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats.
Identities = 135/229 (58%), Positives = 170/229 (74%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL+LFSGGQDS+TCL+ AL F+RVETL FDYGQR+ VE++ R VR+++ E P W
Sbjct: 22 KGALVLFSGGQDSTTCLAQALAMFERVETLGFDYGQRHSVEMQVRAGVREQLAERFPLWA 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LGEDH+L L +L I SSLT++VA +Q + LPNTFVPGRN++FL A LAYR G+
Sbjct: 82 PRLGEDHVLSLDVLKQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRGL 141
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
T IV GVCETDYSGYPDCR DT++A + A+NLG+E + + TPLMWL K +TW+LAQD+G
Sbjct: 142 TVIVTGVCETDYSGYPDCRDDTMKAQQLALNLGLERRLRIDTPLMWLDKAQTWQLAQDLG 201
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G +LV LI E+HTCY G RD +EWGYGC +CPAC LR GW ++
Sbjct: 202 GSELVELIRTETHTCYQGTRDALHEWGYGCGNCPACELRASGWHNWRAS 250
>gi|170694007|ref|ZP_02885163.1| exsB protein [Burkholderia graminis C4D1M]
gi|170141079|gb|EDT09251.1| exsB protein [Burkholderia graminis C4D1M]
Length = 243
Score = 321 bits (822), Expect = 7e-86, Method: Composition-based stats.
Identities = 121/229 (52%), Positives = 174/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WAL+R+D VETL FDYGQR++VELECR R + P W
Sbjct: 7 KRSALVLFSGGQDSATCLAWALERYDTVETLGFDYGQRHRVELECREGFRNAVARTFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LG+DH++ L++LG IS +++T+ + ++ + LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 GERLGDDHMIDLSVLGAISETAMTREIEIEATASGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM+S + TPLMWL K +TW+LA ++
Sbjct: 127 LEVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFALETPLMWLDKADTWRLAHEL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG +LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+ +
Sbjct: 187 GGDELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAYLA 235
>gi|92117391|ref|YP_577120.1| ExsB [Nitrobacter hamburgensis X14]
gi|119367948|sp|Q1QM87|QUEC_NITHX RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91800285|gb|ABE62660.1| preQ(0) biosynthesis protein QueC [Nitrobacter hamburgensis X14]
Length = 238
Score = 320 bits (821), Expect = 8e-86, Method: Composition-based stats.
Identities = 137/230 (59%), Positives = 176/230 (76%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ +AL+LFSGGQDS+TCL+WAL RF VETL FDYGQR+ +EL+CR + + L P W
Sbjct: 7 SRTALVLFSGGQDSATCLAWALQRFAHVETLGFDYGQRHAIELDCRDALLAGMTSLRPDW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LGE H L + L +IS ++LT+NVA+++ + LPNTFVPGRN++FL FAA LAYR G
Sbjct: 67 AEKLGEGHTLAIPTLAEISDTALTRNVAIEMGEGGLPNTFVPGRNLVFLTFAAALAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+T+IV G+CETDYSGYPDCR DTI+A++TA+NLGM+ +HTPLMWL K TW LA ++
Sbjct: 127 MTDIVGGMCETDYSGYPDCRDDTIKALQTALNLGMDKQFELHTPLMWLDKAATWALAHEL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
GG LV+LI E SHTCYLG+R R++WGYGC CPAC LR KGW E+ +
Sbjct: 187 GGAGLVDLIREHSHTCYLGERGARHDWGYGCGECPACRLRAKGWCEYVAR 236
>gi|83719597|ref|YP_440695.1| exsB protein [Burkholderia thailandensis E264]
gi|167579366|ref|ZP_02372240.1| exsB protein [Burkholderia thailandensis TXDOH]
gi|167617467|ref|ZP_02386098.1| exsB protein [Burkholderia thailandensis Bt4]
gi|257140657|ref|ZP_05588919.1| exsB protein [Burkholderia thailandensis E264]
gi|110816219|sp|Q2T2A4|QUEC_BURTA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|83653422|gb|ABC37485.1| exsB protein [Burkholderia thailandensis E264]
Length = 244
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 119/227 (52%), Positives = 173/227 (76%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P+W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ A +AYR G
Sbjct: 67 SHKLGDDHMIDLSVLGAISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIGAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA+ +
Sbjct: 127 LRALVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GG+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 187 GGKPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGFEAY 233
>gi|299532639|ref|ZP_07046027.1| exsB protein [Comamonas testosteroni S44]
gi|298719274|gb|EFI60243.1| exsB protein [Comamonas testosteroni S44]
Length = 253
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 136/229 (59%), Positives = 170/229 (74%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL+LFSGGQDS+TCL+ AL F+RVETL FDYGQR+ VE++ R VR+++ E P W
Sbjct: 22 KGALVLFSGGQDSTTCLAQALAMFERVETLGFDYGQRHSVEMQVRAGVREQLAERFPLWA 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LGEDH+L L +L I SSLT++VA +Q + LPNTFVPGRN++FL A LAYR G+
Sbjct: 82 PRLGEDHVLSLDVLKQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRGL 141
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
T IV GVCETDYSGYPDCR DT++A + A+NLG+E + + TPLMWL K +TW+LAQD+G
Sbjct: 142 TVIVTGVCETDYSGYPDCRDDTMKAQQLALNLGLERRLRIDTPLMWLDKAQTWQLAQDLG 201
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G +LV LI E+HTCY G RD +EWGYGC SCPAC LR GW ++
Sbjct: 202 GSELVELIRTETHTCYQGTRDALHEWGYGCGSCPACELRASGWHNWRAS 250
>gi|307728150|ref|YP_003905374.1| exsB protein [Burkholderia sp. CCGE1003]
gi|307582685|gb|ADN56083.1| exsB protein [Burkholderia sp. CCGE1003]
Length = 243
Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats.
Identities = 121/229 (52%), Positives = 174/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R + P W
Sbjct: 7 KRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRSAVARTFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 GERLGDDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM+S + TPLMWL K +TW+LA ++
Sbjct: 127 LQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFLLETPLMWLDKADTWRLAHEL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG +LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+ +
Sbjct: 187 GGDELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAYLA 235
>gi|319791822|ref|YP_004153462.1| exsb protein [Variovorax paradoxus EPS]
gi|315594285|gb|ADU35351.1| exsB protein [Variovorax paradoxus EPS]
Length = 237
Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats.
Identities = 129/230 (56%), Positives = 169/230 (73%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +AL+LFSGGQDS+TCL+ AL ++ RVETL FDYGQR++VEL+ R + ++ E
Sbjct: 1 MPLHTTALVLFSGGQDSTTCLADALSKYQRVETLGFDYGQRHRVELDVRGTILAQMRERF 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P W LGEDH+L LA L + SSLT+ VA +Q + LPNTFVPGRN++FL A LAY
Sbjct: 61 PDWAPRLGEDHVLTLAALAQLGGSSLTEEVAFAMQADGLPNTFVPGRNLLFLTLAGALAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ IV GVCETD+SGYPDCR DT++A++ A++LG+E + + TPLMW+ K ETW++A
Sbjct: 121 RRGLQVIVTGVCETDFSGYPDCRDDTMKAMQLALSLGLERRLVIETPLMWIDKAETWQMA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG+ LV LI+EE+HTCYLG R R WGYGC CPAC LR+KGW +
Sbjct: 181 HRLGGEPLVELIVEETHTCYLGDRVHRQAWGYGCGECPACDLRKKGWERY 230
>gi|148255468|ref|YP_001240053.1| hypothetical protein BBta_4081 [Bradyrhizobium sp. BTAi1]
gi|146407641|gb|ABQ36147.1| preQ(0) biosynthesis protein QueC [Bradyrhizobium sp. BTAi1]
Length = 241
Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats.
Identities = 134/234 (57%), Positives = 182/234 (77%), Gaps = 2/234 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+D +AL+LFSGGQDS+TCL+WALDRF R+ET+ FDYGQR+ +EL+CR + +
Sbjct: 3 MSDTHDM--TALVLFSGGQDSTTCLAWALDRFARIETIGFDYGQRHAIELDCRARLLDGL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+L P+W LG+ H L + L IS ++LT++VA+++ + LPNTFVPGRN++FL FAA
Sbjct: 61 AQLRPEWAGKLGDGHTLEIPTLSAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GI++IV G+CETDYSGYPDCR +TI+A++ A++LGM +HTPLMWL K T
Sbjct: 121 ALAYRRGISHIVGGMCETDYSGYPDCRDETIKALQGALSLGMARPFELHTPLMWLSKAAT 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W+LA D+GG+DLV+LI ++SHTCYLG+R R++WGYGC +CPAC LR +GW E+
Sbjct: 181 WQLAYDLGGRDLVDLIRDQSHTCYLGERGARHDWGYGCGACPACDLRARGWHEY 234
>gi|187922324|ref|YP_001893966.1| exsB protein [Burkholderia phytofirmans PsJN]
gi|254764316|sp|B2T1L3|QUEC_BURPP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|187713518|gb|ACD14742.1| exsB protein [Burkholderia phytofirmans PsJN]
Length = 244
Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats.
Identities = 121/227 (53%), Positives = 174/227 (76%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R + P W
Sbjct: 7 KRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVARAFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 AERLGDDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA +
Sbjct: 127 LQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVLLETPLMWLDKGDTWRLAHQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GG +LV L+ E+HTCY+G+R + + WG+GC CPAC LR++G+ +
Sbjct: 187 GGDELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAY 233
>gi|152981295|ref|YP_001354876.1| ExsB protein [Janthinobacterium sp. Marseille]
gi|167016430|sp|A6T2X9|QUEC_JANMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151281372|gb|ABR89782.1| ExsB protein [Janthinobacterium sp. Marseille]
Length = 235
Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats.
Identities = 123/235 (52%), Positives = 181/235 (77%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A AL+LFSGGQDS+TC++WAL R+ +VET+ FDYGQR+ VELE R V + + ++
Sbjct: 1 MSSADGALVLFSGGQDSTTCVAWALKRYAKVETIGFDYGQRHAVELEVRPDVLRSLRDIN 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P+W LGEDH++ L+++ IS++++T++V + + +N LPNTFVPGRN++F+ AAT+AY
Sbjct: 61 PEWNKKLGEDHMIDLSLISKISNTAMTQDVEITMMENGLPNTFVPGRNLLFMTVAATVAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +V G+CETD+SGYPDCR DT++A++ A+NLGM + + + TPLMW+ K ETWK+A
Sbjct: 121 RRGLDVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATRLKLETPLMWIDKAETWKMA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
QD+GG+ LV+LI +HTCYLG+R ++WGYGC +CPAC LR +G+ F + +
Sbjct: 181 QDLGGKPLVDLIRAGTHTCYLGERGALHDWGYGCGTCPACELRARGYANFAAQEK 235
>gi|258542251|ref|YP_003187684.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-01]
gi|256633329|dbj|BAH99304.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-01]
gi|256636388|dbj|BAI02357.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-03]
gi|256639441|dbj|BAI05403.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-07]
gi|256642497|dbj|BAI08452.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-22]
gi|256645552|dbj|BAI11500.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-26]
gi|256648605|dbj|BAI14546.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-32]
gi|256651658|dbj|BAI17592.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256654649|dbj|BAI20576.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
IFO 3283-12]
Length = 246
Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/228 (63%), Positives = 181/228 (79%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL+LFSGGQDS+TCL+WAL+R+ RVETL FDYGQR+ VELECR +R+ +V P
Sbjct: 8 KQESALVLFSGGQDSATCLAWALERYGRVETLGFDYGQRHAVELECRASIRQGLVHQNPV 67
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W + LGEDH LPL LG++S +SLT++ + + +N LPNTFVPGRN+IFL FAA LA R
Sbjct: 68 WAERLGEDHTLPLHALGEVSETSLTRDAEISMAENGLPNTFVPGRNLIFLTFAAALAARR 127
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETDYSGYPDCR DTI+A++ A+NLGMES +HTPLMWL K ETW+LA++
Sbjct: 128 GIKHIVTGVCETDYSGYPDCRDDTIKALQVALNLGMESRYVLHTPLMWLDKAETWELAEE 187
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GGQ LV LI +ESHTCYLG+R + WG+GC +CPAC LR+ GW ++
Sbjct: 188 LGGQPLVELINKESHTCYLGERGTLHAWGHGCGTCPACQLRKSGWDDY 235
>gi|221064992|ref|ZP_03541097.1| exsB protein [Comamonas testosteroni KF-1]
gi|220710015|gb|EED65383.1| exsB protein [Comamonas testosteroni KF-1]
Length = 253
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 134/229 (58%), Positives = 170/229 (74%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL+LFSGGQDS+TCL+ AL F+RVETL FDYGQR+ VE++ R VR+++ + P+W
Sbjct: 22 KGALVLFSGGQDSTTCLAQALAMFERVETLGFDYGQRHSVEMQVRAGVREQLAQRFPQWA 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LGEDH+L L +L I SSLT++VA +Q + LPNTFVPGRN++FL A LAYR G+
Sbjct: 82 PRLGEDHVLSLDVLKQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRGL 141
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
T IV GVCETDYSGYPDCR DT++A + A+NLG+E + + TPLMWL K +TW+LA D+G
Sbjct: 142 TVIVTGVCETDYSGYPDCRDDTMKAQQLALNLGLERRLRIDTPLMWLDKAQTWQLAHDLG 201
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G DLV LI E+HTCY G RD ++WGYGC SCPAC LR GW ++
Sbjct: 202 GSDLVELIRTETHTCYQGTRDVLHDWGYGCGSCPACELRASGWHNWRAS 250
>gi|16127390|ref|NP_421954.1| exsB protein [Caulobacter crescentus CB15]
gi|221236198|ref|YP_002518635.1| queuosine biosynthesis protein QueC [Caulobacter crescentus NA1000]
gi|81534466|sp|Q9A3P2|QUEC_CAUCR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764317|sp|B8H3X3|QUEC_CAUCN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|13424830|gb|AAK25122.1| exsB protein [Caulobacter crescentus CB15]
gi|220965371|gb|ACL96727.1| queuosine biosynthesis protein QueC [Caulobacter crescentus NA1000]
Length = 242
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 122/229 (53%), Positives = 179/229 (78%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ +AL+LFSGGQDSS CL+WAL+R+DRVET+ FDYGQR+ +E++ R VR+++ P
Sbjct: 4 RERQAALVLFSGGQDSSVCLAWALERYDRVETVGFDYGQRHAIEMQARQAVRREVAARFP 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+W + LGEDH+L + G ++ S+LT + A+++ + LP+TFVPGRN++FL +AA LA R
Sbjct: 64 QWAERLGEDHVLDIRSFGAVAQSALTADRAIEMTERGLPSTFVPGRNLVFLTYAAALADR 123
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +V G+CETD+SGYPDCR DT+ A++ A+NLGM+ + + TPLMWL K +TW L++
Sbjct: 124 RGIDALVGGMCETDFSGYPDCRRDTLDAMQAALNLGMDRNFRIETPLMWLTKAQTWGLSK 183
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG+ LV+LI+EESHTCY G+R + + WG+GC +CPAC LR+KG++E+
Sbjct: 184 QLGGEALVSLIVEESHTCYQGERGQLHAWGHGCGTCPACELREKGYVEW 232
>gi|189039058|sp|A5EJ03|QUEC_BRASB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 239
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 134/234 (57%), Positives = 182/234 (77%), Gaps = 2/234 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+D +AL+LFSGGQDS+TCL+WALDRF R+ET+ FDYGQR+ +EL+CR + +
Sbjct: 1 MSDTHDM--TALVLFSGGQDSTTCLAWALDRFARIETIGFDYGQRHAIELDCRARLLDGL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+L P+W LG+ H L + L IS ++LT++VA+++ + LPNTFVPGRN++FL FAA
Sbjct: 59 AQLRPEWAGKLGDGHTLEIPTLSAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAA 118
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GI++IV G+CETDYSGYPDCR +TI+A++ A++LGM +HTPLMWL K T
Sbjct: 119 ALAYRRGISHIVGGMCETDYSGYPDCRDETIKALQGALSLGMARPFELHTPLMWLSKAAT 178
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W+LA D+GG+DLV+LI ++SHTCYLG+R R++WGYGC +CPAC LR +GW E+
Sbjct: 179 WQLAYDLGGRDLVDLIRDQSHTCYLGERGARHDWGYGCGACPACDLRARGWHEY 232
>gi|325518104|gb|EGC97894.1| ExsB family protein [Burkholderia sp. TJI49]
Length = 244
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 121/229 (52%), Positives = 178/229 (77%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P+W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRQFPQW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 SDRLGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ + +
Sbjct: 187 GGEALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLK 235
>gi|299133865|ref|ZP_07027059.1| exsB protein [Afipia sp. 1NLS2]
gi|298591701|gb|EFI51902.1| exsB protein [Afipia sp. 1NLS2]
Length = 235
Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats.
Identities = 131/234 (55%), Positives = 176/234 (75%), Gaps = 2/234 (0%)
Query: 5 IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K P +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ +ELECR + +
Sbjct: 1 MDKTPENAALVLFSGGQDSATCLAWALSRFARVETLGFDYGQRHAIELECRATLIEGFKR 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L P+WK LGE H+L + L +IS ++LT+++A+++++ LPNTFVPGRN++FL FAA L
Sbjct: 61 LKPEWKTKLGEAHMLAIPTLAEISDTALTRDIAIEMEEGGLPNTFVPGRNLLFLTFAAAL 120
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
YR GI +IV G+CETDYSGYPDCR +TI+++ A+N GM +HTPLMW K +TW
Sbjct: 121 GYRRGIRHIVGGMCETDYSGYPDCRDETIKSLNVALNQGMGRDFELHTPLMWRDKAQTWA 180
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA ++GG+ LV+LI++ SHTCYLG+R ++WGYGC CPAC LR GW ++K
Sbjct: 181 LAHELGGEALVDLIVQHSHTCYLGERGALHDWGYGCGECPACRLRAAGWEKYKA 234
>gi|237747077|ref|ZP_04577557.1| queuosine biosynthesis protein queC [Oxalobacter formigenes HOxBLS]
gi|229378428|gb|EEO28519.1| queuosine biosynthesis protein queC [Oxalobacter formigenes HOxBLS]
Length = 246
Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats.
Identities = 116/237 (48%), Positives = 177/237 (74%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + +AL+LFSGGQDS+TCL+WAL ++ VET+ F YGQR+ VELE R + +K+ +
Sbjct: 8 PPVTRDKNALVLFSGGQDSTTCLAWALTHYNHVETVGFSYGQRHAVELEGRPRILEKLRQ 67
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
KW LG DHI+ L+++ +S +++T + +++ +N LPNTFVPGRN++FL AA L
Sbjct: 68 FSEKWNRRLGADHIVDLSLISHLSETAMTTEMEIRVMENGLPNTFVPGRNLMFLTAAAML 127
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AYR + +V G+CETD+SGYPDCR D ++A++ A+N+GM++ + + TPLMW K ETW+
Sbjct: 128 AYRRDLNTLVGGMCETDFSGYPDCRDDAVKALQVALNIGMDTRLALLTPLMWKNKKETWQ 187
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+A D+GGQ L+ LI+ E+HTCY+G+ ++ +EWGYGC CPAC LR++G+ME++ + +
Sbjct: 188 MAFDLGGQKLIELIVSETHTCYIGEHNRLHEWGYGCGKCPACLLRKRGFMEYQSEKK 244
>gi|27379606|ref|NP_771135.1| hypothetical protein blr4495 [Bradyrhizobium japonicum USDA 110]
gi|27352758|dbj|BAC49760.1| blr4495 [Bradyrhizobium japonicum USDA 110]
Length = 243
Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats.
Identities = 139/234 (59%), Positives = 176/234 (75%), Gaps = 1/234 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+D + +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ VEL CR + +
Sbjct: 7 MSDAFS-SETALVLFSGGQDSTTCLAWALSRFARVETLGFDYGQRHAVELACRDRLFDGL 65
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L W D LGE H L + L IS ++LT++VA+ + + LPNTFVPGRN++FL FAA
Sbjct: 66 KGLRADWADKLGESHTLSIPTLAAISDTALTRDVAIAMGADGLPNTFVPGRNLVFLTFAA 125
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GIT+IV G+CETDYSGYPDCR +T+RA++ A++LGM +HTPLMW+ K T
Sbjct: 126 ALAYRRGITHIVGGMCETDYSGYPDCRDETVRAMQAALSLGMARKFELHTPLMWIDKAAT 185
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
WKLA D+GG+ LV+LI E+SHTCYLG+R ++EWGYGC CPAC LR KGW E+
Sbjct: 186 WKLAHDLGGEGLVDLIREQSHTCYLGERGAQHEWGYGCGECPACSLRAKGWNEY 239
>gi|161526285|ref|YP_001581297.1| exsB protein [Burkholderia multivorans ATCC 17616]
gi|189349001|ref|YP_001944629.1| ExsB protein [Burkholderia multivorans ATCC 17616]
gi|221214676|ref|ZP_03587646.1| exsB protein [Burkholderia multivorans CGD1]
gi|254764314|sp|A9AC62|QUEC_BURM1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|160343714|gb|ABX16800.1| exsB protein [Burkholderia multivorans ATCC 17616]
gi|189333023|dbj|BAG42093.1| ExsB protein [Burkholderia multivorans ATCC 17616]
gi|221165566|gb|EED98042.1| exsB protein [Burkholderia multivorans CGD1]
Length = 244
Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats.
Identities = 122/229 (53%), Positives = 177/229 (77%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRQFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 ADRLGDDHMIDLSVLGAISDTAMTRAIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GGQ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ + +
Sbjct: 187 GGQALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLK 235
>gi|110816215|sp|Q89LP8|QUEC_BRAJA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 237
Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats.
Identities = 139/234 (59%), Positives = 176/234 (75%), Gaps = 1/234 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+D + +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ VEL CR + +
Sbjct: 1 MSDAFS-SETALVLFSGGQDSTTCLAWALSRFARVETLGFDYGQRHAVELACRDRLFDGL 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L W D LGE H L + L IS ++LT++VA+ + + LPNTFVPGRN++FL FAA
Sbjct: 60 KGLRADWADKLGESHTLSIPTLAAISDTALTRDVAIAMGADGLPNTFVPGRNLVFLTFAA 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GIT+IV G+CETDYSGYPDCR +T+RA++ A++LGM +HTPLMW+ K T
Sbjct: 120 ALAYRRGITHIVGGMCETDYSGYPDCRDETVRAMQAALSLGMARKFELHTPLMWIDKAAT 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
WKLA D+GG+ LV+LI E+SHTCYLG+R ++EWGYGC CPAC LR KGW E+
Sbjct: 180 WKLAHDLGGEGLVDLIREQSHTCYLGERGAQHEWGYGCGECPACSLRAKGWNEY 233
>gi|53717819|ref|YP_106805.1| hypothetical protein BPSL0177 [Burkholderia pseudomallei K96243]
gi|53724958|ref|YP_101991.1| exsB protein [Burkholderia mallei ATCC 23344]
gi|76810042|ref|YP_331770.1| exsB protein [Burkholderia pseudomallei 1710b]
gi|121599254|ref|YP_994091.1| exsB protein [Burkholderia mallei SAVP1]
gi|124386328|ref|YP_001028246.1| exsB protein [Burkholderia mallei NCTC 10229]
gi|126440314|ref|YP_001057214.1| ExsB protein [Burkholderia pseudomallei 668]
gi|126449865|ref|YP_001081889.1| exsB protein [Burkholderia mallei NCTC 10247]
gi|126455276|ref|YP_001064454.1| exsB protein [Burkholderia pseudomallei 1106a]
gi|134284079|ref|ZP_01770773.1| exsB protein [Burkholderia pseudomallei 305]
gi|167003283|ref|ZP_02269072.1| exsB protein [Burkholderia mallei PRL-20]
gi|217425012|ref|ZP_03456508.1| protein ExsB [Burkholderia pseudomallei 576]
gi|226194594|ref|ZP_03790189.1| exsB protein [Burkholderia pseudomallei Pakistan 9]
gi|237810349|ref|YP_002894800.1| ExsB protein [Burkholderia pseudomallei MSHR346]
gi|238561921|ref|ZP_00441217.2| ExsB protein [Burkholderia mallei GB8 horse 4]
gi|242316798|ref|ZP_04815814.1| exsB protein [Burkholderia pseudomallei 1106b]
gi|254177086|ref|ZP_04883743.1| exsB protein [Burkholderia mallei ATCC 10399]
gi|254182244|ref|ZP_04888841.1| exsB protein [Burkholderia pseudomallei 1655]
gi|254188168|ref|ZP_04894680.1| exsB protein [Burkholderia pseudomallei Pasteur 52237]
gi|254196853|ref|ZP_04903277.1| exsB protein [Burkholderia pseudomallei S13]
gi|254203671|ref|ZP_04910031.1| exsB protein [Burkholderia mallei FMH]
gi|254208647|ref|ZP_04914995.1| exsB protein [Burkholderia mallei JHU]
gi|254258405|ref|ZP_04949459.1| exsB protein [Burkholderia pseudomallei 1710a]
gi|254360299|ref|ZP_04976569.1| exsB protein [Burkholderia mallei 2002721280]
gi|81380692|sp|Q63YL0|QUEC_BURPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81605690|sp|Q62MS6|QUEC_BURMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816217|sp|Q3JXD3|QUEC_BURP1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016413|sp|A3MNQ3|QUEC_BURM7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016414|sp|A2S8H7|QUEC_BURM9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016415|sp|A1V788|QUEC_BURMS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016416|sp|A3NQ33|QUEC_BURP0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016417|sp|A3N4E3|QUEC_BURP6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|52208233|emb|CAH34164.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52428381|gb|AAU48974.1| exsB protein [Burkholderia mallei ATCC 23344]
gi|76579495|gb|ABA48970.1| exsB protein [Burkholderia pseudomallei 1710b]
gi|121228064|gb|ABM50582.1| exsB protein [Burkholderia mallei SAVP1]
gi|124294348|gb|ABN03617.1| protein ExsB [Burkholderia mallei NCTC 10229]
gi|126219807|gb|ABN83313.1| protein ExsB [Burkholderia pseudomallei 668]
gi|126228918|gb|ABN92458.1| exsB protein [Burkholderia pseudomallei 1106a]
gi|126242735|gb|ABO05828.1| protein ExsB [Burkholderia mallei NCTC 10247]
gi|134244531|gb|EBA44635.1| exsB protein [Burkholderia pseudomallei 305]
gi|147745183|gb|EDK52263.1| exsB protein [Burkholderia mallei FMH]
gi|147750523|gb|EDK57592.1| exsB protein [Burkholderia mallei JHU]
gi|148029539|gb|EDK87444.1| exsB protein [Burkholderia mallei 2002721280]
gi|157935848|gb|EDO91518.1| exsB protein [Burkholderia pseudomallei Pasteur 52237]
gi|160698127|gb|EDP88097.1| exsB protein [Burkholderia mallei ATCC 10399]
gi|169653596|gb|EDS86289.1| exsB protein [Burkholderia pseudomallei S13]
gi|184212782|gb|EDU09825.1| exsB protein [Burkholderia pseudomallei 1655]
gi|217392032|gb|EEC32058.1| protein ExsB [Burkholderia pseudomallei 576]
gi|225933295|gb|EEH29287.1| exsB protein [Burkholderia pseudomallei Pakistan 9]
gi|237506493|gb|ACQ98811.1| ExsB protein [Burkholderia pseudomallei MSHR346]
gi|238523619|gb|EEP87056.1| ExsB protein [Burkholderia mallei GB8 horse 4]
gi|242140037|gb|EES26439.1| exsB protein [Burkholderia pseudomallei 1106b]
gi|243061140|gb|EES43326.1| exsB protein [Burkholderia mallei PRL-20]
gi|254217094|gb|EET06478.1| exsB protein [Burkholderia pseudomallei 1710a]
Length = 244
Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats.
Identities = 120/227 (52%), Positives = 173/227 (76%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P+W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 SHKLGDDHLIDLSVLGSISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA+ +
Sbjct: 127 LRALVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GG LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 187 GGAPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAY 233
>gi|221201866|ref|ZP_03574903.1| exsB protein [Burkholderia multivorans CGD2M]
gi|221207628|ref|ZP_03580636.1| exsB protein [Burkholderia multivorans CGD2]
gi|221172474|gb|EEE04913.1| exsB protein [Burkholderia multivorans CGD2]
gi|221178286|gb|EEE10696.1| exsB protein [Burkholderia multivorans CGD2M]
Length = 244
Score = 317 bits (814), Expect = 5e-85, Method: Composition-based stats.
Identities = 122/229 (53%), Positives = 177/229 (77%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRQFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 VDRLGDDHMIDLSVLGAISDTAMTRAIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GGQ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ + +
Sbjct: 187 GGQALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLK 235
>gi|171319448|ref|ZP_02908553.1| exsB protein [Burkholderia ambifaria MEX-5]
gi|171095340|gb|EDT40321.1| exsB protein [Burkholderia ambifaria MEX-5]
Length = 244
Score = 317 bits (814), Expect = 6e-85, Method: Composition-based stats.
Identities = 121/229 (52%), Positives = 174/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHQFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 AGRLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLLFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG LV LI E+HTCY+G+R + +EWG+GC CPAC LR++G+ + +
Sbjct: 187 GGDALVELIRVETHTCYVGERAELHEWGFGCGECPACKLRKRGYEAYLK 235
>gi|189039059|sp|A4YUN8|QUEC_BRASO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 236
Score = 317 bits (814), Expect = 6e-85, Method: Composition-based stats.
Identities = 132/231 (57%), Positives = 176/231 (76%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ++ +AL+LFSGGQDS+TCL+WALDRF RVET+ F YGQR+ +EL+CR +R I +L
Sbjct: 1 MSEQDATALVLFSGGQDSTTCLAWALDRFARVETIGFSYGQRHGIELDCRARLRDGIAQL 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W D LG +H L + L IS ++LT++VA+++ + LPNTFVPGRN++FL FAA LA
Sbjct: 61 RADWADKLGCEHTLDIPTLAAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAAALA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR GI +IV G+CETDYSGYPDCR +TI+A++ A++LGM +HTPLMWL K TW+L
Sbjct: 121 YRRGIRHIVGGMCETDYSGYPDCRDETIKALQVALSLGMARPFELHTPLMWLTKAATWQL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A D+GG+ LV+LI +ESHTCYLG+R R++WG+GC CPAC LR GW +
Sbjct: 181 AHDLGGRGLVDLIRDESHTCYLGERGARHDWGHGCGRCPACELRAHGWRAY 231
>gi|167561071|ref|ZP_02353987.1| exsB protein [Burkholderia oklahomensis EO147]
gi|167568300|ref|ZP_02361174.1| exsB protein [Burkholderia oklahomensis C6786]
Length = 244
Score = 317 bits (814), Expect = 6e-85, Method: Composition-based stats.
Identities = 118/228 (51%), Positives = 176/228 (77%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + + P+W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECRDGVRDALKQRFPQW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ A +AYR G
Sbjct: 67 ENKLGDDHMIDLSVLGAISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIGAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ +NLGM++ + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMDTRFVLETPLMWLDKADTWRLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
GG+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ ++
Sbjct: 187 GGKPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYEAYQ 234
>gi|167834986|ref|ZP_02461869.1| exsB protein [Burkholderia thailandensis MSMB43]
Length = 244
Score = 317 bits (814), Expect = 6e-85, Method: Composition-based stats.
Identities = 119/227 (52%), Positives = 172/227 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P+W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ A +AYR G
Sbjct: 67 SHKLGDDHMVDLSVLGAISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIGAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ +NLGM+S + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMDSRFVLETPLMWLDKADTWRLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GG+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 187 GGKPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGFEAY 233
>gi|146340791|ref|YP_001205839.1| putative ExsB [Bradyrhizobium sp. ORS278]
gi|146193597|emb|CAL77614.1| conserved hypothetical protein; putative ExsB [Bradyrhizobium sp.
ORS278]
Length = 248
Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats.
Identities = 132/231 (57%), Positives = 176/231 (76%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ++ +AL+LFSGGQDS+TCL+WALDRF RVET+ F YGQR+ +EL+CR +R I +L
Sbjct: 13 MSEQDATALVLFSGGQDSTTCLAWALDRFARVETIGFSYGQRHGIELDCRARLRDGIAQL 72
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W D LG +H L + L IS ++LT++VA+++ + LPNTFVPGRN++FL FAA LA
Sbjct: 73 RADWADKLGCEHTLDIPTLAAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAAALA 132
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR GI +IV G+CETDYSGYPDCR +TI+A++ A++LGM +HTPLMWL K TW+L
Sbjct: 133 YRRGIRHIVGGMCETDYSGYPDCRDETIKALQVALSLGMARPFELHTPLMWLTKAATWQL 192
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A D+GG+ LV+LI +ESHTCYLG+R R++WG+GC CPAC LR GW +
Sbjct: 193 AHDLGGRGLVDLIRDESHTCYLGERGARHDWGHGCGRCPACELRAHGWRAY 243
>gi|115353225|ref|YP_775064.1| exsB protein [Burkholderia ambifaria AMMD]
gi|172062097|ref|YP_001809749.1| exsB protein [Burkholderia ambifaria MC40-6]
gi|122321936|sp|Q0BAU3|QUEC_BURCM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764311|sp|B1YPW9|QUEC_BURA4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|115283213|gb|ABI88730.1| preQ(0) biosynthesis protein QueC [Burkholderia ambifaria AMMD]
gi|171994614|gb|ACB65533.1| exsB protein [Burkholderia ambifaria MC40-6]
Length = 244
Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats.
Identities = 120/229 (52%), Positives = 174/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHRFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 AGRLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLLFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ + +
Sbjct: 187 GGDALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLK 235
>gi|167645046|ref|YP_001682709.1| exsB protein [Caulobacter sp. K31]
gi|189038904|sp|B0SX50|QUEC_CAUSK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167347476|gb|ABZ70211.1| exsB protein [Caulobacter sp. K31]
Length = 250
Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats.
Identities = 125/229 (54%), Positives = 176/229 (76%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+A +AL+LFSGGQDSS CL+WAL+R+ RVET+ FDYGQR+ +E+E R+ VR ++ E P
Sbjct: 12 SRADAALVLFSGGQDSSVCLAWALERYARVETVGFDYGQRHHIEMEARVAVRHQVAERFP 71
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
W LGEDH+L L G ++HS+LT +VA+++ + LP+TFVPGRN++FL++AA LA R
Sbjct: 72 HWARRLGEDHVLDLTGFGAVAHSALTADVAIEMTERGLPSTFVPGRNLVFLIYAAALADR 131
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+ +V G+CETD+SGYPDCR DT+ A+++A+NLGM+ + TPLM L K +TW LA+
Sbjct: 132 RGLGALVGGMCETDFSGYPDCRRDTLDAMQSALNLGMDRDFVIETPLMKLTKAQTWALAK 191
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG+DLV+LI+ ESHTCY G+R + WG+GC CPAC LR++G+ E+
Sbjct: 192 SLGGEDLVDLIVVESHTCYQGERGDLHPWGHGCGECPACELRRRGYEEW 240
>gi|206558875|ref|YP_002229635.1| putative putative transcriptional regulator [Burkholderia
cenocepacia J2315]
gi|254764313|sp|B4E7W5|QUEC_BURCJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|198034912|emb|CAR50784.1| putative putative transcriptional regulator [Burkholderia
cenocepacia J2315]
Length = 244
Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats.
Identities = 121/229 (52%), Positives = 176/229 (76%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKHRFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 SDRLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRMVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ + +
Sbjct: 187 GGDALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLK 235
>gi|107024050|ref|YP_622377.1| ExsB [Burkholderia cenocepacia AU 1054]
gi|116691137|ref|YP_836760.1| exsB protein [Burkholderia cenocepacia HI2424]
gi|170734468|ref|YP_001766415.1| exsB protein [Burkholderia cenocepacia MC0-3]
gi|118574281|sp|Q1BSK1|QUEC_BURCA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016412|sp|A0KBJ0|QUEC_BURCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764312|sp|B1K0I8|QUEC_BURCC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|105894239|gb|ABF77404.1| preQ(0) biosynthesis protein QueC [Burkholderia cenocepacia AU
1054]
gi|116649226|gb|ABK09867.1| preQ(0) biosynthesis protein QueC [Burkholderia cenocepacia HI2424]
gi|169817710|gb|ACA92293.1| exsB protein [Burkholderia cenocepacia MC0-3]
Length = 244
Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats.
Identities = 121/229 (52%), Positives = 177/229 (77%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKHRFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 SDRLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRMVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ + +
Sbjct: 187 GGEALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLK 235
>gi|78067939|ref|YP_370708.1| ExsB family protein [Burkholderia sp. 383]
gi|110816218|sp|Q39BV2|QUEC_BURS3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|77968684|gb|ABB10064.1| preQ(0) biosynthesis protein QueC [Burkholderia sp. 383]
Length = 244
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 122/229 (53%), Positives = 177/229 (77%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRDFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 SDRLGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLMFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG+ LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ + +
Sbjct: 187 GGEALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLK 235
>gi|134297294|ref|YP_001121029.1| exsB protein [Burkholderia vietnamiensis G4]
gi|167016418|sp|A4JIU1|QUEC_BURVG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|134140451|gb|ABO56194.1| preQ(0) biosynthesis protein QueC [Burkholderia vietnamiensis G4]
Length = 244
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 121/229 (52%), Positives = 174/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHRFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 AGRLGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ + +
Sbjct: 187 GGAALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLK 235
>gi|329113418|ref|ZP_08242199.1| 7-cyano-7-deazaguanine synthase [Acetobacter pomorum DM001]
gi|326697243|gb|EGE48903.1| 7-cyano-7-deazaguanine synthase [Acetobacter pomorum DM001]
Length = 262
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 142/228 (62%), Positives = 179/228 (78%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL+LFSGGQDS+TCL+WAL+R+ RVETL FDYGQR+ VELECR +R+ +V P
Sbjct: 24 KQESALVLFSGGQDSATCLAWALERYGRVETLGFDYGQRHAVELECRASIRQGLVNQNPT 83
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LG+DH LPL LG++S +SLT++ + + +N LPNTFVPGRN+IFL FAA LA R
Sbjct: 84 WASRLGDDHTLPLHALGEVSETSLTRDAEISMAENGLPNTFVPGRNLIFLTFAAALAARR 143
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETDYSGYPDCR DTI+A++ A+NLGMES +HTPLMWL K ETW+LA++
Sbjct: 144 GIKHIVTGVCETDYSGYPDCRDDTIKALQVALNLGMESRYVLHTPLMWLDKAETWELAEE 203
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG LV LI +ESHTCYLG+R + WG+GC +CPAC LR+ GW ++
Sbjct: 204 LGGHPLVELINKESHTCYLGERGILHAWGHGCGTCPACQLRKSGWDDY 251
>gi|238028937|ref|YP_002913168.1| exsB protein [Burkholderia glumae BGR1]
gi|237878131|gb|ACR30464.1| ExsB protein [Burkholderia glumae BGR1]
Length = 244
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 121/229 (52%), Positives = 179/229 (78%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR+ + P+W
Sbjct: 10 ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALRTRFPQWAGR 69
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH++ L++LG IS +++T+++ ++ N LPNTFVPGRN++F+ AA +AYR G+
Sbjct: 70 LGDDHMIDLSVLGAISDTAMTRSIEIETAANGLPNTFVPGRNLLFMTIAAAVAYRRGLKV 129
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA+ +GG
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKADTWRLAEQLGGA 189
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LV L+ E+HTCY+G+R + ++WG+GC +CPAC LR++G+ ++ Q
Sbjct: 190 ALVELVRVETHTCYVGERAELHDWGFGCGACPACKLRRRGYEAYRNGGQ 238
>gi|182677257|ref|YP_001831403.1| exsB protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633140|gb|ACB93914.1| exsB protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 241
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 125/229 (54%), Positives = 171/229 (74%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TCL+WALDRF VET+ F YGQR+ +EL R VR I P W
Sbjct: 10 NNKALVLFSGGQDSTTCLAWALDRFAFVETIGFSYGQRHVIELTQRQVVRASIARQFPAW 69
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LG+DH++ + L +IS ++LT+++A+++ LPNTFVPGRN++FL FA L YR G
Sbjct: 70 AERLGDDHLVTIEALAEISQTALTRDMAIEMDAQGLPNTFVPGRNLLFLTFAGALGYRRG 129
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +IV G+CETD+SGYPDCR DT++A++ A+NLGM+ + TPLMWL K ETW+LA+ +
Sbjct: 130 LKHIVGGMCETDFSGYPDCRDDTVKAMQVALNLGMDRRFVLETPLMWLDKAETWRLAEAL 189
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GGQ LV+LI+EE+HTCYLG+R + WG+GC CPAC LR KG+ +++
Sbjct: 190 GGQALVDLIIEETHTCYLGERGALHAWGHGCGQCPACVLRAKGYAAYRD 238
>gi|254295715|ref|ZP_04963172.1| exsB protein [Burkholderia pseudomallei 406e]
gi|157806285|gb|EDO83455.1| exsB protein [Burkholderia pseudomallei 406e]
Length = 244
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 120/227 (52%), Positives = 173/227 (76%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + P+W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 SHKLGDDHLIDLSVLGSISDTAMTRAIEIETALNGLPNTFVPGRNLLFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA+ +
Sbjct: 127 LRALVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GG LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ +
Sbjct: 187 GGAPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAY 233
>gi|154245818|ref|YP_001416776.1| exsB protein [Xanthobacter autotrophicus Py2]
gi|154159903|gb|ABS67119.1| exsB protein [Xanthobacter autotrophicus Py2]
Length = 249
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 131/229 (57%), Positives = 174/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TCL++AL+RF RVETL F YGQR+ VELE R +R L P W
Sbjct: 9 EEGALVLFSGGQDSATCLAYALERFGRVETLGFHYGQRHAVELERRPVLRDAFATLKPAW 68
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG DH+L + +LG IS ++LT++VA+++ + LPNTFVPGRN++FL FAA LAYR G
Sbjct: 69 ASRLGADHMLDMPVLGQISETALTRDVAVEMAEGGLPNTFVPGRNLVFLTFAAALAYRRG 128
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +I+ G+CETD+SGYPDCR DT++A++ A+NLGME +HTPLMW+ K ETW LA+ +
Sbjct: 129 LRHIIGGMCETDFSGYPDCRDDTVKAMQVALNLGMEKRFVLHTPLMWIDKAETWGLAERL 188
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG LV+LI+E++HTCYLG+R KR+ WGYGC CPAC LR G+ ++
Sbjct: 189 GGTALVDLIVEDAHTCYLGERGKRHAWGYGCGECPACKLRADGFARYRA 237
>gi|332530017|ref|ZP_08405967.1| ExsB [Hylemonella gracilis ATCC 19624]
gi|332040490|gb|EGI76866.1| ExsB [Hylemonella gracilis ATCC 19624]
Length = 234
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 126/230 (54%), Positives = 173/230 (75%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
SAL+LFSGGQDS+TCL+ AL R++RVET++FDY QR+ VEL+ RL V ++ P
Sbjct: 1 MHTSALVLFSGGQDSTTCLAHALSRYERVETIAFDYRQRHVVELDARLRVLDELRRAYPH 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LG+DH+L +A+LG +S +SLT+ ++Q N LPNTFVPGRN++FL AA +AYR
Sbjct: 61 WASRLGQDHLLDVAVLGAVSETSLTRETEFQMQANGLPNTFVPGRNLLFLTLAAAVAYRR 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ +V GVCETD+SGYPDCR DT++A++ A++LGM+ + + TPLMW+ K ETW+LA+
Sbjct: 121 DLQVLVTGVCETDFSGYPDCRDDTMKAMQLALSLGMDKRLLIETPLMWIDKAETWRLAET 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+GG+ LV LI+E +HTCYLG+RD R+ WGYGC CPAC LR +GW ++
Sbjct: 181 LGGKRLVELIVEHTHTCYLGERDHRHAWGYGCGHCPACELRARGWERYQA 230
>gi|91781439|ref|YP_556645.1| ExsB [Burkholderia xenovorans LB400]
gi|91685393|gb|ABE28593.1| preQ(0) biosynthesis protein QueC [Burkholderia xenovorans LB400]
Length = 232
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 121/223 (54%), Positives = 171/223 (76%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR R +V P W D LGE
Sbjct: 2 LFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVVRAFPAWADRLGE 61
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+ +V
Sbjct: 62 DHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQVLVG 121
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
G+CETD+SGYPDCR DT++A++ A+NLGM++ + TPLMWL K +TW+LA ++GG +LV
Sbjct: 122 GMCETDFSGYPDCRDDTMKALQVALNLGMDTRFLLETPLMWLDKADTWRLAHELGGAELV 181
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
L+ E+HTCYLG+R + + WG+GC CPAC LR++G+ +
Sbjct: 182 ELVRVETHTCYLGERAELHAWGFGCGECPACRLRKRGYEAYLA 224
>gi|330818677|ref|YP_004362382.1| ExsB protein [Burkholderia gladioli BSR3]
gi|327371070|gb|AEA62426.1| ExsB protein [Burkholderia gladioli BSR3]
Length = 244
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 120/229 (52%), Positives = 179/229 (78%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TC++WAL+ + VETL FDYGQR++VELECR VR+ + P+W +
Sbjct: 10 ALVLFSGGQDSATCVAWALEHYSTVETLGFDYGQRHRVELECREGVREALRTRFPQWTNR 69
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA LAYR G+
Sbjct: 70 LGDDHMIDLSVLGAISDTAMTRAIEIETSANGLPNTFVPGRNLLFMTIAAALAYRRGLKV 129
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRMVLETPLMWLDKADTWRLAEQLGGA 189
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+LV L+ E+HTCY+G+R + ++WG+GC +CPAC LR++G+ ++ Q
Sbjct: 190 ELVELVRVETHTCYVGERAELHDWGFGCGACPACKLRKRGYEAYRSGEQ 238
>gi|295688230|ref|YP_003591923.1| ExsB protein [Caulobacter segnis ATCC 21756]
gi|295430133|gb|ADG09305.1| exsB protein [Caulobacter segnis ATCC 21756]
Length = 243
Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats.
Identities = 127/234 (54%), Positives = 178/234 (76%), Gaps = 1/234 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ ++ +AL+LFSGGQDSS CL+WAL+R+ RVET+ FDYGQR+ VE+E R VR+++
Sbjct: 1 MSPP-ERTDAALVLFSGGQDSSVCLAWALERYGRVETVGFDYGQRHVVEMEARQAVRREV 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
P W D LGEDH+L + G ++ S+LT + A+++ + LP+TFVPGRN++FL++AA
Sbjct: 60 AARFPHWADRLGEDHVLDIRSFGAVAQSALTADRAIEMTERGLPSTFVPGRNLVFLIYAA 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA R G+ +V G+CETD+SGYPDCR DT+ A+++A+NLGM+ + V TPLMWL K ET
Sbjct: 120 ALADRRGVDALVGGMCETDFSGYPDCRRDTLDAMQSALNLGMDRNFRVETPLMWLTKAET 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W L++ +GG+DLV LI+EESHTCY G+R + WG+GC CPAC LR+KG+ E+
Sbjct: 180 WALSKALGGEDLVKLIVEESHTCYQGERGVLHAWGHGCGVCPACELREKGYAEW 233
>gi|86749826|ref|YP_486322.1| ExsB [Rhodopseudomonas palustris HaA2]
gi|110816203|sp|Q2IWJ9|QUEC1_RHOP2 RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|86572854|gb|ABD07411.1| ExsB [Rhodopseudomonas palustris HaA2]
Length = 238
Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats.
Identities = 132/237 (55%), Positives = 172/237 (72%), Gaps = 1/237 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + + +AL+LFSGGQDS+TCL+WAL RF RVE + FDYGQR+ VEL+CR +
Sbjct: 1 MTEPVSD-QTALVLFSGGQDSATCLAWALSRFARVEMIGFDYGQRHAVELDCRAKLLDGF 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ +W LG+ H L + L IS ++LT++V + + + LPNTFVPGRN+IFL FAA
Sbjct: 60 RAISSEWASKLGDSHTLAIPTLSAISDTALTRDVEIAMGADGLPNTFVPGRNLIFLTFAA 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GI +IV G+CETDYSGYPDCR DTI+A++ AI+LGM +HTPLMW K T
Sbjct: 120 ALAYRRGIADIVGGMCETDYSGYPDCRDDTIKALQGAISLGMARDFELHTPLMWRDKAAT 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
W+LA D+GG LV+LI E SHTCYLG+R +R++WGYGC CPAC LR +GW E++ +
Sbjct: 180 WQLAHDLGGAALVDLIREHSHTCYLGERGERHDWGYGCGECPACALRARGWREYRTR 236
>gi|170703436|ref|ZP_02894208.1| exsB protein [Burkholderia ambifaria IOP40-10]
gi|170131651|gb|EDT00207.1| exsB protein [Burkholderia ambifaria IOP40-10]
Length = 244
Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats.
Identities = 119/229 (51%), Positives = 173/229 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL+R+ VETL FDYGQR++VELECR VR + W
Sbjct: 7 KDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHRFTAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH++ L++LG IS +++T+ + ++ N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 AGRLGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLLFMTIAAAIAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG LV LI E+HTCY+G+R + ++WG+GC CPAC LR++G+ + +
Sbjct: 187 GGDALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAYLK 235
>gi|241761765|ref|ZP_04759851.1| exsB protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260752525|ref|YP_003225418.1| exsB protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|241373679|gb|EER63239.1| exsB protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258551888|gb|ACV74834.1| exsB protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 254
Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats.
Identities = 126/232 (54%), Positives = 179/232 (77%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+L+SGGQDS+TCL+WAL+ FDRVET+ FDYGQR+K+ELECR +++K+++ P
Sbjct: 22 SNEGCLVLYSGGQDSATCLAWALEHFDRVETIGFDYGQRHKIELECRENLKQKLIQNFPD 81
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LGEDH+L LA+L +S +LT+ + ++ +PN+FVPGRN++F FAAT+AYR
Sbjct: 82 WAAHLGEDHMLDLAVLHQVSDCALTRETEIAFGEDGIPNSFVPGRNLLFFTFAATIAYRR 141
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +IV G+CETDYSGYPDCR DTI+A++ AINLG+E + +HTPLMWL K TW++A++
Sbjct: 142 GLRHIVGGMCETDYSGYPDCRDDTIKALQVAINLGLERRLVLHTPLMWLDKASTWQMAEE 201
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+GG++LV +I +ESH+CYLG+R+ ++WGYGC CPAC LR GW +++
Sbjct: 202 VGGKELVEIIRQESHSCYLGEREILHDWGYGCGHCPACELRAAGWESYQKSR 253
>gi|56551919|ref|YP_162758.1| exsB protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|81355074|sp|Q5NNR3|QUEC_ZYMMO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56543493|gb|AAV89647.1| exsB protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 254
Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats.
Identities = 127/232 (54%), Positives = 179/232 (77%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+L+SGGQDS+TCL+WAL+ FDRVET+ FDYGQR+KVELECR +++K+++ P
Sbjct: 22 SNEGCLVLYSGGQDSATCLAWALEHFDRVETIGFDYGQRHKVELECRENLKQKLIQNFPD 81
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LGEDH+L LA+L +S +LT+ + ++ +PN+FVPGRN++F FAAT+AYR
Sbjct: 82 WAAHLGEDHMLDLAVLHQVSDCALTRETEIAFGEDGIPNSFVPGRNLLFFTFAATIAYRR 141
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +IV G+CETDYSGYPDCR DTI+A++ AINLG+E + +HTPLMWL K TW++A++
Sbjct: 142 GLRHIVGGMCETDYSGYPDCRDDTIKALQVAINLGLERRLVLHTPLMWLDKASTWQMAEE 201
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+GG++LV +I +ESH+CYLG+R+ ++WGYGC CPAC LR GW +++
Sbjct: 202 VGGKELVEIIRQESHSCYLGEREILHDWGYGCGHCPACELRAAGWESYQKSR 253
>gi|170748385|ref|YP_001754645.1| exsB protein [Methylobacterium radiotolerans JCM 2831]
gi|170654907|gb|ACB23962.1| exsB protein [Methylobacterium radiotolerans JCM 2831]
Length = 239
Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats.
Identities = 136/226 (60%), Positives = 175/226 (77%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+AL+LFSGGQDS+TCL+WALDRFD VETL FDYGQR++VEL+ R +R L P W
Sbjct: 11 RAALVLFSGGQDSATCLAWALDRFDHVETLGFDYGQRHRVELDRRAALRAGTTALDPAWA 70
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG+DH L L LG +S ++LT+ A+ + + LPNTFVPGRN++FL FAA LAYR G+
Sbjct: 71 ARLGDDHTLALDALGQVSETALTREAAIGYEASGLPNTFVPGRNLVFLTFAAALAYRRGL 130
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
++V G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMWL K +TW+LA+ +G
Sbjct: 131 RHVVGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWLDKAQTWELAESLG 190
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G+ LV+LI+EESHTCYLG+R +R+ WGYGC +CPAC LR G+ F
Sbjct: 191 GRALVDLIVEESHTCYLGERGQRHPWGYGCGTCPACRLRADGYARF 236
>gi|212702261|ref|ZP_03310389.1| hypothetical protein DESPIG_00272 [Desulfovibrio piger ATCC 29098]
gi|212674324|gb|EEB34807.1| hypothetical protein DESPIG_00272 [Desulfovibrio piger ATCC 29098]
Length = 242
Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats.
Identities = 125/231 (54%), Positives = 171/231 (74%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++FSGGQDS+TCL+WAL RF RV TL FDYGQR+ VELECR VR I L P+W+
Sbjct: 10 QQALVIFSGGQDSATCLAWALSRFARVCTLGFDYGQRHSVELECRGKVRSAIAALKPEWQ 69
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D LG D +L +++ ++ ++LT ++ ++ + +PNTFVPGRN++F++ AA AY I
Sbjct: 70 DRLGPDTLLDISLFRQLADTALTSDMPIEQEGEGIPNTFVPGRNLLFIMHAAAWAYGKDI 129
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
++V+GVCE+D SGYPDCR D+I+A++ A+N GM+SH +HTPLMWL K +TW+LA+D+G
Sbjct: 130 RHLVLGVCESDSSGYPDCRDDSIKAMQVALNTGMDSHFVLHTPLMWLDKADTWRLAEDLG 189
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G LV+ ILE+SHTCY G R +RY WGYGC CPAC LR G+ + +Y
Sbjct: 190 GMPLVDCILEQSHTCYEGTRGERYPWGYGCGRCPACKLRAHGYEVYLSRYH 240
>gi|39935877|ref|NP_948153.1| ExsB family transcriptional regulator [Rhodopseudomonas palustris
CGA009]
gi|81562458|sp|Q6N608|QUEC_RHOPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|39649731|emb|CAE28252.1| possible exsB protein [Rhodopseudomonas palustris CGA009]
Length = 237
Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats.
Identities = 139/234 (59%), Positives = 179/234 (76%), Gaps = 1/234 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M D +AL+LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ +ELECR +
Sbjct: 1 MTD-HSSDKTALVLFSGGQDSATCLAWALARFARVETIGFDYGQRHLIELECRARLLDGF 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ W LG++H L + L +IS ++LT++VA+ + + LPNTFVPGRN+IFL FAA
Sbjct: 60 RAISDDWAAKLGDNHTLTIPTLAEISDTALTRDVAIAMGADGLPNTFVPGRNLIFLNFAA 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GIT+IV G+CETDYSGYPDCR+DTI+A++TA++LGM +T+HTPLMW K T
Sbjct: 120 ALAYRRGITDIVGGMCETDYSGYPDCRNDTIQALQTALSLGMARDITLHTPLMWRDKAAT 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W+LAQD+GG LV+LI E+SHTCYLG+R R++WGYGC CPAC LR KGW+E+
Sbjct: 180 WQLAQDLGGDALVDLIREDSHTCYLGERGARHDWGYGCGECPACRLRAKGWIEY 233
>gi|323136676|ref|ZP_08071757.1| exsB protein [Methylocystis sp. ATCC 49242]
gi|322397993|gb|EFY00514.1| exsB protein [Methylocystis sp. ATCC 49242]
Length = 240
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 134/227 (59%), Positives = 172/227 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ SAL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR++VELE R +R+ I + P W
Sbjct: 10 SDSALVLFSGGQDSTTCLAWALTRFSRVETLGFDYGQRHRVELERRAALREGIARISPAW 69
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ LGEDH + + LG IS ++LT+ + + + LPNTFVPGRN++FL FAA LAYR
Sbjct: 70 RERLGEDHTISIEALGAISDTALTREAEIAMNVDGLPNTFVPGRNLLFLTFAAALAYRRS 129
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I ++V G+CETDYSGYPDCR TIRA+ A++LGM+ +HTPLMW+ K TW+LAQ++
Sbjct: 130 ILDLVGGMCETDYSGYPDCRDGTIRAMAQALSLGMDRAFVIHTPLMWIDKAATWRLAQEL 189
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GG LV LI+EESHTCYLG+R + ++WGYGC CPAC LR GW F
Sbjct: 190 GGDALVQLIVEESHTCYLGERGRPFDWGYGCGECPACQLRAAGWERF 236
>gi|217976466|ref|YP_002360613.1| exsB protein [Methylocella silvestris BL2]
gi|217501842|gb|ACK49251.1| exsB protein [Methylocella silvestris BL2]
Length = 236
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 128/228 (56%), Positives = 174/228 (76%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL LFSGGQDS+TCL++ALDR+D VET+ FDY QR+++EL+ R +R ++ P W
Sbjct: 7 RRGALTLFSGGQDSTTCLAYALDRYDHVETIGFDYDQRHRIELDQRGKIRDALLRDFPAW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
KD LGEDH++ + L +I+ +++T +V + N LPNTFVPGRN++FL FA LAYR G
Sbjct: 67 KDKLGEDHLVRIGALAEIATTAMTHDVEIAFDANGLPNTFVPGRNLLFLTFAGALAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+T I+ G+CETD+SGYPDCR DT++A++ A+NLGM++ V TPLMWL K TW+LA+ +
Sbjct: 127 LTQIIGGMCETDFSGYPDCRDDTVKAMQIALNLGMDTRFNVETPLMWLDKAATWRLAERL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
GG+ L+ +ILEE+HTCYLG+R KR+ WGYGC CPAC LR KGW E++
Sbjct: 187 GGKALIAIILEETHTCYLGERGKRHNWGYGCGECPACQLRAKGWREYR 234
>gi|192291524|ref|YP_001992129.1| exsB protein [Rhodopseudomonas palustris TIE-1]
gi|254764373|sp|B3QKK5|QUEC_RHOPT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|192285273|gb|ACF01654.1| exsB protein [Rhodopseudomonas palustris TIE-1]
Length = 237
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 139/234 (59%), Positives = 179/234 (76%), Gaps = 1/234 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M D +AL+LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ +ELECR +
Sbjct: 1 MTD-HSSDKTALVLFSGGQDSATCLAWALARFARVETIGFDYGQRHLIELECRARLLDGF 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ W LG++H L + L +IS ++LT++VA+ + + LPNTFVPGRN+IFL FAA
Sbjct: 60 RAISDDWAAKLGDNHTLTIPTLAEISDTALTRDVAIAMGADGLPNTFVPGRNLIFLNFAA 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GIT+IV G+CETDYSGYPDCR+DTI+A++TA++LGM +T+HTPLMW K T
Sbjct: 120 ALAYRRGITDIVGGMCETDYSGYPDCRNDTIQALQTALSLGMARDITLHTPLMWRDKAAT 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W+LAQD+GG LV+LI E+SHTCYLG+R R++WGYGC CPAC LR KGW+E+
Sbjct: 180 WQLAQDLGGDALVDLIREDSHTCYLGERGARHDWGYGCGECPACRLRSKGWIEY 233
>gi|91977221|ref|YP_569880.1| ExsB [Rhodopseudomonas palustris BisB5]
gi|123749011|sp|Q136L0|QUEC_RHOPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91683677|gb|ABE39979.1| ExsB [Rhodopseudomonas palustris BisB5]
Length = 238
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 137/228 (60%), Positives = 171/228 (75%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL+LFSGGQDS+TCL+WAL RF RVE + FDYGQR+ VEL+CR + + P+W
Sbjct: 9 TALVLFSGGQDSATCLAWALSRFARVEMIGFDYGQRHAVELDCRAKLLDGFRAISPEWAA 68
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+ H L + L IS ++LT++V + + + LPNTFVPGRN+IFL FAA LAYR GI
Sbjct: 69 KLGDSHTLAIPTLSAISDTALTRDVEIAMGADGLPNTFVPGRNLIFLTFAAALAYRRGIA 128
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+IV G+CETDYSGYPDCR DTIRA++ AI+LGM V +HTPLMW K TW+LAQD+GG
Sbjct: 129 DIVGGMCETDYSGYPDCRDDTIRALQNAISLGMARDVKLHTPLMWRDKAATWQLAQDLGG 188
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV+LI+E SHTCYLG+R R++WGYGC CPAC LR KGW E+ K
Sbjct: 189 SALVDLIVEHSHTCYLGERGARHDWGYGCGECPACALRAKGWREYSAK 236
>gi|75675645|ref|YP_318066.1| ExsB [Nitrobacter winogradskyi Nb-255]
gi|110816237|sp|Q3SSM7|QUEC_NITWN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|74420515|gb|ABA04714.1| preQ(0) biosynthesis protein QueC [Nitrobacter winogradskyi Nb-255]
Length = 238
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 136/232 (58%), Positives = 172/232 (74%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ +EL+CR + + L P W
Sbjct: 7 SRTALVLFSGGQDSATCLAWALQRFARVETLGFDYGQRHAIELDCRDSLLAGMASLRPDW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LGE H L + L +IS ++LT+NVA+++ ++ LPNTFVPGRN++FL FAA LAYR G
Sbjct: 67 AKKLGETHTLAIPTLAEISDTALTRNVAIEVSESGLPNTFVPGRNLVFLTFAAALAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+T+IV G+CETDYSGYPDCR +TIRA+ A+NLGM +HTPLM L K TW LA ++
Sbjct: 127 VTDIVGGMCETDYSGYPDCRDETIRALRIALNLGMVRQFELHTPLMRLDKGATWSLAHEL 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
GG LV+LI E SHTCYLG+R R+ WGYGC CPAC LR KGW E+ +
Sbjct: 187 GGTGLVDLIREHSHTCYLGERGARHAWGYGCGECPACGLRAKGWREYLARIA 238
>gi|307728085|ref|YP_003905309.1| exsB protein [Burkholderia sp. CCGE1003]
gi|307582620|gb|ADN56018.1| exsB protein [Burkholderia sp. CCGE1003]
Length = 234
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 125/228 (54%), Positives = 170/228 (74%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
AL+LFSGGQDS+TCL+WALDR+ VET+ FDYGQR+ +ELECR V + + P+
Sbjct: 1 MKTHALVLFSGGQDSTTCLAWALDRYQHVETIGFDYGQRHAIELECRQTVLASLRKQFPE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LG+DH+L L+ILG IS ++LT A+++Q N LPNTFVPGRN++F AA +AYR
Sbjct: 61 WTCKLGDDHMLDLSILGQISDTALTAGKAIEMQKNGLPNTFVPGRNLLFFTLAAAVAYRR 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +V G+CETDYSGYPDCR T++A++ AI LGM+ V + PLMW+ K +TW++A
Sbjct: 121 GLQVLVGGMCETDYSGYPDCRDSTLKALQVAIALGMDQPVVIEAPLMWIDKAQTWQMASQ 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG LV+LIL+E+HTCY+G +++WGYGC +CPAC LRQ+G+ F
Sbjct: 181 LGGAKLVDLILDETHTCYVGDHTTQHQWGYGCGTCPACELRQRGYEAF 228
>gi|296536223|ref|ZP_06898341.1| transcription regulator ExsB [Roseomonas cervicalis ATCC 49957]
gi|296263445|gb|EFH09952.1| transcription regulator ExsB [Roseomonas cervicalis ATCC 49957]
Length = 248
Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats.
Identities = 132/231 (57%), Positives = 175/231 (75%), Gaps = 3/231 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+++ELECR R + E W
Sbjct: 21 EDGALVLFSGGQDSATCLAWALTRFARVETLGFDYGQRHRIELECRAGFRDGLPE---DW 77
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LG DH L L LG++S ++LT+ + +Q + LPNTFVPGRN++FL FAA LAYR G
Sbjct: 78 QARLGPDHTLRLDALGELSDTALTRETEIAMQADGLPNTFVPGRNLLFLTFAAALAYRRG 137
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +IV G+CETD+SGYPDCR DT++A++ A+NLGME +HTPLMWL K ETW+LA+ +
Sbjct: 138 LRHIVGGMCETDFSGYPDCRDDTLKALQVALNLGMERRFVLHTPLMWLDKGETWELAERL 197
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
GGQ LV I+E++HTCY G+R +R+ WG+GC +CPAC LR +GW E++ +
Sbjct: 198 GGQKLVCDIVEKTHTCYRGERGERHPWGHGCAACPACELRARGWAEYRSRR 248
>gi|316934031|ref|YP_004109013.1| ExsB protein [Rhodopseudomonas palustris DX-1]
gi|315601745|gb|ADU44280.1| exsB protein [Rhodopseudomonas palustris DX-1]
Length = 237
Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats.
Identities = 135/229 (58%), Positives = 176/229 (76%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+AL+LFSGGQDS+TCL+WALDRF RVET+ FDYGQR+ +EL CR + + + W
Sbjct: 8 KTALVLFSGGQDSATCLAWALDRFARVETIGFDYGQRHLIELACRSRLLDGVRGINADWA 67
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG+ H L + L +IS ++LT++VA+ + + LPNTFVPGRN+IFL FAA LAYR GI
Sbjct: 68 AKLGDSHTLTIPTLAEISDTALTRDVAIAMGADGLPNTFVPGRNLIFLTFAAALAYRRGI 127
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
T+IV G+CETDYSGYPDCR+DTI+A+++A++LGM +T+HTPLMW K TW+LA+D+G
Sbjct: 128 TDIVGGMCETDYSGYPDCRNDTIQALQSALSLGMARDLTLHTPLMWRDKAATWQLAKDLG 187
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G LV+LI E+SHTCYLG+R R+ WGYGC CPAC LR KGW E+ +
Sbjct: 188 GDALVDLIREDSHTCYLGERGARHAWGYGCGECPACRLRAKGWNEYAAR 236
>gi|149926202|ref|ZP_01914464.1| exsB protein [Limnobacter sp. MED105]
gi|149825020|gb|EDM84232.1| exsB protein [Limnobacter sp. MED105]
Length = 234
Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats.
Identities = 114/228 (50%), Positives = 168/228 (73%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
AL+LFSGGQDS+ CL+WAL +F+ VET+ FDYGQR+++ELECRL V ++ E P+
Sbjct: 1 MNKKALVLFSGGQDSTVCLAWALSKFEHVETIGFDYGQRHRIELECRLTVLDRVREQFPE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LGED ++ L+ LG IS +LT+ +++ +N LPNTFVPGRN++F + ++ +AYR
Sbjct: 61 WAYKLGEDRVIDLSWLGQISDCALTEEREIELNENGLPNTFVPGRNLVFFLISSAVAYRR 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G++ +V G+C+TD+SGYPDCR DT++A++ A NLGM S TPLMW+ K ET++L +
Sbjct: 121 GLSTLVGGMCQTDFSGYPDCREDTLKALQVATNLGMASTFRFETPLMWIDKMETFQLGEQ 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG+ L+ +I+ ++HTCY G R ++WG+GC CPAC LR++GW +
Sbjct: 181 LGGKKLLEIIVRDTHTCYTGDRSHEHDWGFGCGECPACDLRKRGWKNY 228
>gi|302383450|ref|YP_003819273.1| exsB protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194078|gb|ADL01650.1| exsB protein [Brevundimonas subvibrioides ATCC 15264]
Length = 238
Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats.
Identities = 126/234 (53%), Positives = 167/234 (71%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + SAL+LFSGGQDS+TCL+WAL+RFDRVET+ FDYGQR+ VE++ RL VR +
Sbjct: 1 MTETQPAPSSALVLFSGGQDSATCLAWALERFDRVETVGFDYGQRHAVEMDARLRVRAGM 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++P+ D LG DH++ L G I +++T + A+++ LP TFVPGRN+IFL AA
Sbjct: 61 PRVLPRLADRLGPDHVVDLTGFGAIGETAMTTDRAIEVGARGLPTTFVPGRNLIFLTAAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA R G+ +V G+CETD+SGYPDCR +T+ A+E A++LG++ V + TPLMWL K T
Sbjct: 121 ALADRRGLEVLVGGMCETDFSGYPDCRRETMDAMERALSLGLDRPVPIQTPLMWLTKART 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W LA IGG LV+LI+E+SHTCY G R R+ WGYGC +CPAC LR GW +
Sbjct: 181 WALADAIGGAALVDLIVEDSHTCYRGDRTHRHAWGYGCGACPACELRAAGWDGW 234
>gi|307294877|ref|ZP_07574719.1| exsB protein [Sphingobium chlorophenolicum L-1]
gi|306879351|gb|EFN10569.1| exsB protein [Sphingobium chlorophenolicum L-1]
Length = 237
Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats.
Identities = 132/227 (58%), Positives = 175/227 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL++FSGGQDS+TCL+WAL+RFDRVET+ F YGQR+++EL R +R+ I + P W
Sbjct: 7 SALVVFSGGQDSATCLAWALNRFDRVETIGFRYGQRHEIELAVRNPLREGIADAFPNWAP 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG D I+ LA+LG++S S+LT ++ + ++D+ LP TFVPGRN+IFL FAA AY+ G+
Sbjct: 67 RLGPDRIIDLAVLGEVSESALTSDIDIGMRDDGLPTTFVPGRNLIFLTFAAITAYQRGLK 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V GVCETDYSGYPDCR DTI+A++ A+NLGM SH+ + TPLMW+ K TW+LA ++GG
Sbjct: 127 HVVTGVCETDYSGYPDCRDDTIKALQAALNLGMGSHLVLDTPLMWIDKAATWRLAAELGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV++I E SH+CYLG R R++WGYGC SCPAC LR GW F E
Sbjct: 187 SALVDIIREHSHSCYLGDRAHRHDWGYGCGSCPACDLRANGWRIFTE 233
>gi|115524890|ref|YP_781801.1| ExsB family transcriptional regulator [Rhodopseudomonas palustris
BisA53]
gi|122295935|sp|Q07ML3|QUEC_RHOP5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|115518837|gb|ABJ06821.1| exsB protein [Rhodopseudomonas palustris BisA53]
Length = 242
Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats.
Identities = 138/238 (57%), Positives = 174/238 (73%), Gaps = 1/238 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ I+ +AL+LFSGGQDS+TCL+WALDRF RVET+ FDYGQR+ VEL+ R + +
Sbjct: 1 MSQILH-PDAALVLFSGGQDSATCLAWALDRFARVETIGFDYGQRHLVELDSRAKLLDGL 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L P+W LGE H L + L +S ++LT++VA+ + + LPNTFVPGRN+IFL FAA
Sbjct: 60 KTLKPEWVAKLGETHTLAIPTLAQVSDTALTRDVAIAMGADGLPNTFVPGRNLIFLTFAA 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GI I+ G+CETDYSGYPDCR TI+A+ AINLGM + +HTPLMWL K T
Sbjct: 120 ALAYRRGIGAIIGGMCETDYSGYPDCRDATIKALGEAINLGMATQFELHTPLMWLDKAAT 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
W LAQ +GG+ LV+LI E SHTCYLG+R R++WG+GC CPAC LR KGW EF +
Sbjct: 180 WGLAQTLGGERLVDLIREHSHTCYLGERGARHDWGFGCGECPACQLRAKGWREFSAQR 237
>gi|312797587|ref|YP_004030509.1| Queuosine biosynthesis protein QueC [Burkholderia rhizoxinica HKI
454]
gi|312169362|emb|CBW76365.1| Queuosine biosynthesis protein QueC [Burkholderia rhizoxinica HKI
454]
Length = 244
Score = 311 bits (796), Expect = 7e-83, Method: Composition-based stats.
Identities = 124/228 (54%), Positives = 176/228 (77%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+TC++WAL R++RVETL FDYGQR++VELECR R ++ P+W
Sbjct: 7 QRGALVLFSGGQDSATCVAWALSRYERVETLGFDYGQRHRVELECRDGFRDALIRAFPQW 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
K +LG+DH + L++LG IS +++T+ + ++ Q N LPNTFVPGRN++F+ AA +AYR G
Sbjct: 67 KQTLGDDHRVDLSVLGAISDTAMTREIQIETQANGLPNTFVPGRNLMFMTIAAAVAYRRG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+CETD+SGYPDCR DT++A++ A+NLGM+ + TPLMWL K +TW+LA I
Sbjct: 127 LGVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDQRFVLETPLMWLDKADTWRLAASI 186
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
GG+ LV LI E+HTCY+G+R + ++WG+GC +CPAC LR +G+ F+
Sbjct: 187 GGEALVELIRVETHTCYVGERAELHDWGFGCGACPACRLRARGYHAFR 234
>gi|254418985|ref|ZP_05032709.1| exsB protein [Brevundimonas sp. BAL3]
gi|196185162|gb|EDX80138.1| exsB protein [Brevundimonas sp. BAL3]
Length = 256
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 130/235 (55%), Positives = 177/235 (75%), Gaps = 1/235 (0%)
Query: 1 MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M+ I++K+P SAL+LFSGGQDS+TCL+WAL+RF+RVET+ FDYGQR++VE+E R VR
Sbjct: 14 MSVILEKSPTSALVLFSGGQDSATCLAWALERFERVETVGFDYGQRHRVEMEARQAVRAG 73
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +P++ D LG+DH++ L G I+ S+LT + +++ LP TFVPGRN+IFLV A
Sbjct: 74 MGAALPQYADRLGDDHVVDLTGYGRIAESALTADRKIEMDARGLPTTFVPGRNLIFLVAA 133
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA R G+ +V G+CETDYSGYPDCRH+T+ A+ A++LG++ V + TPLMWL K +
Sbjct: 134 AALADRRGLEVLVGGMCETDYSGYPDCRHETMEAMARALSLGLDKPVVIDTPLMWLTKGQ 193
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
TW LA+ IGG+ LV LI+E+SHTCY G R R+ WGYGC CPAC LR G+ ++
Sbjct: 194 TWALAERIGGEALVELIIEDSHTCYQGDRTHRHAWGYGCGECPACELRAAGYEDW 248
>gi|134096097|ref|YP_001101172.1| regulatory protein [Herminiimonas arsenicoxydans]
gi|167016429|sp|A4G964|QUEC_HERAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|133740000|emb|CAL63051.1| Queuosine biosynthesis protein QueC [Herminiimonas arsenicoxydans]
Length = 233
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 122/230 (53%), Positives = 175/230 (76%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A SAL+LFSGGQDS+TCL+WAL + RVET+ FDYGQR+ +EL R + +K+ +
Sbjct: 1 MNSANSALVLFSGGQDSTTCLAWALTHYARVETIGFDYGQRHAIELAVRPFLLEKMRLIS 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P+W LG DH++ L+++ IS+++LT NV + + +N LPNTFVPGRN++F+ AAT+AY
Sbjct: 61 PEWDGRLGADHMIDLSLIAKISNTALTSNVEIAMLENGLPNTFVPGRNLLFMTVAATVAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +V G+CETD+SGYPDCR DT++A++ +NLGM + + V TPLMW+ K TWK+A
Sbjct: 121 RRGLDVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATKLKVETPLMWIDKAATWKMA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
QD+GG L+NL+ +HTCYLG+R + ++WGYGC +CPAC LR +G+ +F
Sbjct: 181 QDLGGTPLLNLVRTGTHTCYLGERGELHDWGYGCGNCPACKLRARGYADF 230
>gi|326314995|ref|YP_004232667.1| exsB protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323371831|gb|ADX44100.1| exsB protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 236
Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats.
Identities = 122/228 (53%), Positives = 173/228 (75%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A AL+LFSGGQDS+TCL+WAL+RF+RVET+ FDYGQR+ VELE R V + E P+
Sbjct: 2 RAGHALVLFSGGQDSTTCLAWALERFERVETIGFDYGQRHHVELEARTAVLAALRERFPR 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W++ LGEDH++ LA+LG IS ++LT++ A+++ + LPNTFVPGRN++F AA + YR
Sbjct: 62 WRERLGEDHMVDLAVLGQISDTALTRDTAIQMTEAGLPNTFVPGRNLLFFQLAAAVGYRR 121
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +V G+CETD+SGYPDCR DT++A++ A++LGM T+ TPLMW+ K TW++A+
Sbjct: 122 GLHTLVGGMCETDFSGYPDCRDDTLKALQVALSLGMGQRFTIETPLMWIDKAATWEMARQ 181
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GG +LV LI+E++HTCY G R + WG+GC CPAC LR+ G+ +
Sbjct: 182 LGGDELVRLIVEDTHTCYHGVRGALHAWGHGCGECPACALRRAGYERW 229
>gi|218886226|ref|YP_002435547.1| exsB protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757180|gb|ACL08079.1| exsB protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 239
Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats.
Identities = 122/230 (53%), Positives = 167/230 (72%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +AL++ SGGQDS+TCL WAL+RF RV T+ F YGQR+ VE++CRL + ++ L
Sbjct: 1 MHSKETALVVLSGGQDSATCLGWALERFGRVSTIGFHYGQRHTVEMDCRLRLMDEVRRLS 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
W + LG+D + LA+ ++ ++LT +VA+++ N LP TFVPGRN++FL AA AY
Sbjct: 61 AGWNERLGDDTTVELALFRELGSTALTHDVAIEMGRNGLPTTFVPGRNLVFLTAAAAHAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R GI +I+IGVCETDYSGYPDCR DTI+A++ A+NLGME+ +HTPLMWL K TW+LA
Sbjct: 121 RQGIRHIIIGVCETDYSGYPDCRDDTIKAMQVALNLGMETRFVLHTPLMWLTKGATWELA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ +GG V ++LE +HTCY G R R+ WGYGC CPAC LR+ GW ++
Sbjct: 181 RQVGGDAFVEVVLEHTHTCYKGVRATRHPWGYGCGDCPACDLRRHGWADY 230
>gi|220904355|ref|YP_002479667.1| exsB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219868654|gb|ACL48989.1| exsB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 258
Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats.
Identities = 119/232 (51%), Positives = 171/232 (73%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+AL++FSGGQDS+TCL+WALDRF RV TL FDYGQR+ VEL CR +R+K+ L P+W
Sbjct: 17 QTALVIFSGGQDSATCLAWALDRFARVRTLGFDYGQRHAVELACRQNLREKLATLNPQWA 76
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L D +L + + +++++LT ++ + LPNTFVPGRN+IF++ AA AY L I
Sbjct: 77 ARLDADCLLDIGLFRQLANTALTSTSPIEDKPEGLPNTFVPGRNLIFILHAAAWAYGLDI 136
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
++V+GVC++D SGYPDCR D+I+A++ A+N+GM+++ +HTPLMW K + W LA+ +G
Sbjct: 137 RHMVLGVCQSDSSGYPDCRDDSIKAMQVALNVGMDANFVLHTPLMWRSKKDAWTLAEVLG 196
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
G +LV+LI+EESHTCY G+R +R+ WGYGC CPAC LR G+ E+ + +
Sbjct: 197 GANLVDLIVEESHTCYEGQRGQRHPWGYGCGQCPACRLRAAGYTEYLTEKSE 248
>gi|171060676|ref|YP_001793025.1| exsB protein [Leptothrix cholodnii SP-6]
gi|254764357|sp|B1Y8J4|QUEC_LEPCP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|170778121|gb|ACB36260.1| exsB protein [Leptothrix cholodnii SP-6]
Length = 235
Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats.
Identities = 126/227 (55%), Positives = 174/227 (76%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + + +AL+LFSGGQDS+TCL+WAL RF VETL+FDYGQR+++EL+CRL V ++ E
Sbjct: 1 MNRDSRTALVLFSGGQDSTTCLAWALTRFAHVETLAFDYGQRHRIELDCRLTVLAQLREQ 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W + LG DH+L L++L IS ++LT +++Q N LPNTFVPGRN++FL AATLA
Sbjct: 61 FPDWAERLGADHLLDLSLLAQISDTALTTEREIELQANGLPNTFVPGRNLLFLGMAATLA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V G+CETDYSGYPDCR +T++A++ A++LG+ + +T+ TPLM+L K +TW L
Sbjct: 121 YRRSASVLVGGMCETDYSGYPDCRDNTLKALQVALSLGLAAPMTIETPLMFLTKAQTWTL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
A+D+GG LV LI E +HTCYLG+R +R+ WG+GC CPAC LR G
Sbjct: 181 AEDLGGAPLVELITEHTHTCYLGERGQRHAWGHGCGHCPACELRHAG 227
>gi|103488120|ref|YP_617681.1| ExsB [Sphingopyxis alaskensis RB2256]
gi|118574279|sp|Q1GPS4|QUEC2_SPHAL RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
gi|98978197|gb|ABF54348.1| ExsB [Sphingopyxis alaskensis RB2256]
Length = 236
Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats.
Identities = 128/227 (56%), Positives = 170/227 (74%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WALDRF+ VET+ FDYGQR++VELECR R +IVEL P W
Sbjct: 7 ALVLFSGGQDSATCLAWALDRFETVETVGFDYGQRHRVELECRDDFRARIVELNPAWAAR 66
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG DH L L++LG +S ++LT++ + ++ + LPNTFVPGRN++F AA LA R + +
Sbjct: 67 LGPDHKLDLSVLGQVSETALTRDAEIALRADGLPNTFVPGRNLLFFTLAAALASRRELRH 126
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETDYSGYPDCR DT+++++ +NLG+ S VHTPLMWL K +TW LA+ +GG+
Sbjct: 127 LVGGMCETDYSGYPDCRDDTLKSLQVTLNLGIGSRSVVHTPLMWLDKAQTWGLAKILGGE 186
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LV+LI +HTCY G D+ +WGYGC +CPAC LR KGW E +
Sbjct: 187 KLVDLIRTGTHTCYRGDHDRLQDWGYGCGTCPACELRMKGWQEHRSS 233
>gi|197106205|ref|YP_002131582.1| exsB protein [Phenylobacterium zucineum HLK1]
gi|196479625|gb|ACG79153.1| exsB protein [Phenylobacterium zucineum HLK1]
Length = 241
Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats.
Identities = 124/231 (53%), Positives = 163/231 (70%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +AL+LFSGGQDSS CL+WALDR+DRVET+ FDYGQR+ VEL+ R VR ++
Sbjct: 1 MGPMTDAALVLFSGGQDSSVCLAWALDRYDRVETVGFDYGQRHAVELQARQAVRSRLAAG 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P+W LGEDH + + G I +++T+ A +I + LP+T+VPGRN+ FL +AA LA
Sbjct: 61 FPRWAGRLGEDHFIEMRGFGAIGGTAMTQERAFEITEKGLPSTYVPGRNLAFLTYAAALA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI +V G+CETDYSGYPDCR D I A+E A+NLGM + TPLM L K +TW L
Sbjct: 121 DRRGIPVLVGGMCETDYSGYPDCRRDAIDAMERALNLGMAQDFRIETPLMRLTKAQTWGL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A +GG+ LV+LI+ ESHTCY G+R + + WG+GC CPAC LR +GW E+
Sbjct: 181 ASRLGGEPLVDLIVRESHTCYRGERGELHAWGHGCGDCPACELRARGWEEW 231
>gi|90424248|ref|YP_532618.1| ExsB [Rhodopseudomonas palustris BisB18]
gi|110816254|sp|Q213Y7|QUEC_RHOPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|90106262|gb|ABD88299.1| ExsB [Rhodopseudomonas palustris BisB18]
Length = 240
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 136/236 (57%), Positives = 176/236 (74%), Gaps = 1/236 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ I++ +AL+LFSGGQDS+TCL+W L RF RVETL FDYGQR+ VEL+CR + +
Sbjct: 1 MSQILQ-HDAALVLFSGGQDSATCLAWTLSRFARVETLGFDYGQRHAVELDCRDRLIDGL 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ P W + LG+ H L + L IS ++LT++VA+ + + LPNTFVPGRN++FL FAA
Sbjct: 60 KQIHPDWANKLGDAHTLSIPTLATISDTALTRDVAIAMGADGLPNTFVPGRNLLFLTFAA 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAYR GI +V G+CETDYSGYPDCR T++A+ TA+NLGM + +HTPLMW K T
Sbjct: 120 ALAYRRGIGGLVGGMCETDYSGYPDCRDATLKALTTALNLGMATDFELHTPLMWRDKAAT 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
W LAQD+GG LV+LI E SHTCYLG+R R++WGYGC CPAC LR KGW E++E
Sbjct: 180 WALAQDLGGDALVDLIREHSHTCYLGERGARHDWGYGCGECPACQLRAKGWREYRE 235
>gi|89899546|ref|YP_522017.1| ExsB [Rhodoferax ferrireducens T118]
gi|110816253|sp|Q220R7|QUEC_RHOFD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|89344283|gb|ABD68486.1| ExsB [Rhodoferax ferrireducens T118]
Length = 243
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 127/236 (53%), Positives = 172/236 (72%), Gaps = 8/236 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+AL+LFSGGQDS+TCL+ AL ++ RVET++FDY QR+ VEL+ RL V +I P+
Sbjct: 1 MHTTALVLFSGGQDSTTCLALALSKYQRVETIAFDYRQRHLVELDARLIVLNEIRARFPQ 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LGEDH+L LA+LG++S +SLT++ A K++ + LPNTFVPGRN++FL AA +AYR
Sbjct: 61 WASKLGEDHLLDLAVLGEVSDTSLTRDTAFKMEQSGLPNTFVPGRNLLFLTLAAAVAYRR 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ +V GVCETD+SGYPDCR DTI+A++ A++LGM+ + TPLMW+ K TW LA +
Sbjct: 121 DLQVMVTGVCETDFSGYPDCRDDTIKAMQLALSLGMDKRFLIETPLMWIDKAATWALAYE 180
Query: 187 I--------GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ GGQ LV+LI+E +HTCYLG R R+ WGYGC SCPAC LR +G+ +
Sbjct: 181 LGEKSGTPGGGQALVDLIIEHTHTCYLGDRQHRHAWGYGCGSCPACELRARGYERY 236
>gi|85715521|ref|ZP_01046502.1| ExsB [Nitrobacter sp. Nb-311A]
gi|85697716|gb|EAQ35592.1| ExsB [Nitrobacter sp. Nb-311A]
Length = 250
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 136/227 (59%), Positives = 172/227 (75%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ +EL CR + + L P W
Sbjct: 19 SRTALVLFSGGQDSATCLAWALQRFARVETLGFDYGQRHAIELNCRDKLLAGMASLRPDW 78
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LGE H L + L +IS ++LT+NVA+++ + LPNTFVPGRN++FL FAA LAYR G
Sbjct: 79 AKKLGETHTLAVPTLAEISDTALTRNVAIEMGEGGLPNTFVPGRNLVFLTFAAALAYRRG 138
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+T+IV G+CETDYSGYPDCR +TIRA+ TA+NLGM + +HTPLM L K TW LA ++
Sbjct: 139 VTDIVGGMCETDYSGYPDCRDETIRALRTALNLGMATRFELHTPLMRLDKGATWSLAHEL 198
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GG LV+LI E SHTCYLG+R R+ WGYGC +CPAC LR KGW ++
Sbjct: 199 GGAGLVDLIREHSHTCYLGERGARHAWGYGCATCPACELRAKGWRKY 245
>gi|296447515|ref|ZP_06889438.1| exsB protein [Methylosinus trichosporium OB3b]
gi|296254982|gb|EFH02086.1| exsB protein [Methylosinus trichosporium OB3b]
Length = 238
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 136/227 (59%), Positives = 176/227 (77%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+TCL++AL RF RVET+ FDYGQR++VEL+ R +R + L P W +
Sbjct: 11 SALVLFSGGQDSATCLAFALSRFARVETIGFDYGQRHRVELDQRAVLRAGMASLSPLWAE 70
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LGEDH + + LG +S ++LT+ A+ LPNTFVPGRNI+FL FAA LAYR GI
Sbjct: 71 RLGEDHTVSIEALGALSETALTREAAIAFDSTGLPNTFVPGRNILFLTFAAALAYRRGIG 130
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V G+CETDYSGYPDCR TIRA+ETA+ LGM+ +T+HTPLMW+ K TW+LA+++GG
Sbjct: 131 DLVGGMCETDYSGYPDCRDATIRAVETALRLGMDRPLTIHTPLMWIDKAATWRLARELGG 190
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ LV+LI+EESHTCYLG+R KR++WG+GC CPAC LR GW F+
Sbjct: 191 EALVSLIVEESHTCYLGERGKRFDWGHGCGECPACRLRAAGWENFRA 237
>gi|317486303|ref|ZP_07945135.1| ExsB protein [Bilophila wadsworthia 3_1_6]
gi|316922473|gb|EFV43727.1| ExsB protein [Bilophila wadsworthia 3_1_6]
Length = 239
Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 121/230 (52%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI---VELMPK 66
SAL++FSGGQDS+TCL WAL+RFDRV T+ FDYGQR+ VE+ECR V + L
Sbjct: 8 SALVIFSGGQDSATCLGWALNRFDRVFTVGFDYGQRHHVEMECRRNVLNAVRSDASLPAS 67
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LGED +L L + I +++T ++ + + +PNTFVPGRN++FL AA LA+R
Sbjct: 68 WAARLGEDTLLSLGLFNQIGETAMTSDMEIAFNEQGIPNTFVPGRNLVFLTAAAALAWRK 127
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI ++V+GVCETD+SGYPDCR DT++A++ A+NLGM++ VHTPLMWL K TW LA+
Sbjct: 128 GIRHLVMGVCETDFSGYPDCRDDTVKAMQVALNLGMDARFVVHTPLMWLDKARTWTLAEQ 187
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
GG V + +HTCY+G R + + WGYGC CPAC LR+ GW E+ E
Sbjct: 188 EGGAPFVECVRTVTHTCYIGDRGELHPWGYGCGQCPACKLREHGWKEYSE 237
>gi|312113884|ref|YP_004011480.1| exsB protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219013|gb|ADP70381.1| exsB protein [Rhodomicrobium vannielii ATCC 17100]
Length = 242
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 121/236 (51%), Positives = 164/236 (69%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + A +L+L SGGQDS+ CL+WAL + +VETL F YGQR+ VELECR +R+ +
Sbjct: 1 MTGTPESATKSLVLLSGGQDSAVCLAWALTNYAQVETLGFSYGQRHSVELECRPKLREAL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L P+W LG DH+L L+ILG +S ++LT + + N LPNTFVPGRN++F AA
Sbjct: 61 AALSPEWAARLGPDHVLDLSILGAVSDTALTSDAEIAFGANGLPNTFVPGRNLLFFTLAA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
L YR GI ++V G+C+TDYSGYPDCR +T++ + +AINLG + + TPLMW K ET
Sbjct: 121 ALGYRRGIRDLVGGMCQTDYSGYPDCRDETLQTLASAINLGTDEQFRIVTPLMWRTKAET 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
W + +GG LV+++ E SHTCY G RD R+EWGYGC +CPAC LR KG+ +++
Sbjct: 181 WAMTHALGGNPLVDIVAEHSHTCYKGVRDHRHEWGYGCGACPACDLRAKGYKAWRD 236
>gi|114328780|ref|YP_745938.1| queuosine biosynthesis protein QueC [Granulibacter bethesdensis
CGDNIH1]
gi|122326267|sp|Q0BQ87|QUEC_GRABC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114316954|gb|ABI63014.1| queuosine biosynthesis protein QueC [Granulibacter bethesdensis
CGDNIH1]
Length = 252
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 127/238 (53%), Positives = 165/238 (69%), Gaps = 5/238 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + AL+LFSGGQDS+TCL+WAL+RF VET+ F YGQR+ VE+ECR VR+ + +
Sbjct: 11 ALPRHDHALVLFSGGQDSTTCLAWALERFAHVETIGFTYGQRHSVEMECRGRVRQVLAHM 70
Query: 64 M----PKWKDSLGEDHILPLAI-LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
W LG+DH+L L L + S+LT ++I LP +FVPGRN+IFL +
Sbjct: 71 SGRSGADWGSRLGDDHVLDLGNALHHVGQSALTGRSPIEIGQGGLPTSFVPGRNLIFLTY 130
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA L +R G+ +V G+CETDYSGYPDCR DTI+A++ A+N GME+H + TPLMWL K
Sbjct: 131 AAALGWRRGLRRMVGGMCETDYSGYPDCRDDTIKAMQLALNTGMEAHFVLETPLMWLTKA 190
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
ETW LA +GG LV LI EE+HTCYLG R +R+ WGYGC CPAC LR +GW E++
Sbjct: 191 ETWALADSLGGPALVALIEEETHTCYLGDRSQRHPWGYGCGECPACSLRAEGWREWQT 248
>gi|319942229|ref|ZP_08016545.1| queuosine biosynthesis protein queC [Sutterella wadsworthensis
3_1_45B]
gi|319804282|gb|EFW01174.1| queuosine biosynthesis protein queC [Sutterella wadsworthensis
3_1_45B]
Length = 252
Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats.
Identities = 119/230 (51%), Positives = 168/230 (73%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ +AL+LFSGGQDS+TCL WAL+RF RVET+ DYGQR++ ELECR+ VR+K+ +L P+
Sbjct: 12 REMAALVLFSGGQDSTTCLGWALERFGRVETIGVDYGQRHQAELECRVRVREKMAQLKPQ 71
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W + LG+DH+L L +LG+I+ +LT + + + LPNTFVPGRN++F AA+LAYR
Sbjct: 72 WGERLGDDHLLKLPVLGEIADCALTDERRIAFEASGLPNTFVPGRNLLFFTLAASLAYRR 131
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +V G+CETDYSGYPDCR +T+++++ ++LG++ + TPLM L K ETW LA+
Sbjct: 132 GLRVLVGGMCETDYSGYPDCRDNTLKSLQVTLDLGLDMPFIIETPLMRLSKAETWALAEH 191
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+GG V L+ ++HTCY+G R+ WGYGC CPAC LR +GW + E
Sbjct: 192 VGGDPFVELVRNDTHTCYMGDHQHRHVWGYGCGECPACKLRAQGWASWSE 241
>gi|329912653|ref|ZP_08275781.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545570|gb|EGF30744.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium
IMCC9480]
Length = 235
Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats.
Identities = 120/233 (51%), Positives = 171/233 (73%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL+LFSGGQDS+TC++WAL R+ RVET+ FDYGQR+ +E+ R V +
Sbjct: 1 MTLPNGALVLFSGGQDSTTCVAWALQRYARVETIGFDYGQRHAIEMTVRPDVLASLRTQS 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P W LGEDH++ L+++G IS ++LT NV + + +N LPNTFVPGRN++F++ AATLAY
Sbjct: 61 PDWDHRLGEDHVIDLSLIGKISDTALTSNVEIAMLENGLPNTFVPGRNLLFMMVAATLAY 120
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G+ +V G+CETD+SGYPDCR DT++A++ +NLGM + + + TPLMW+ K TW LA
Sbjct: 121 RRGLDVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATRLKLETPLMWIDKAATWALA 180
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +GG LV+LI +HTCYLG+R ++WGYGC +CPAC LR KG+ ++++
Sbjct: 181 ESLGGDTLVDLIRTGTHTCYLGERGALHDWGYGCGTCPACALRAKGYAGYRQR 233
>gi|315499627|ref|YP_004088430.1| exsb protein [Asticcacaulis excentricus CB 48]
gi|315417639|gb|ADU14279.1| exsB protein [Asticcacaulis excentricus CB 48]
Length = 241
Score = 304 bits (780), Expect = 6e-81, Method: Composition-based stats.
Identities = 115/235 (48%), Positives = 171/235 (72%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + SAL+LFSGGQDS+ CL+WAL F+RVET+ FDYGQR+ +E+ R V ++ E
Sbjct: 7 ETVPAECSALVLFSGGQDSTACLAWALTHFERVETIGFDYGQRHAIEMTTRARVLERFPE 66
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + LG+DH++ L G ++ SSLT+ +++ + LPN+FVPGRN++F V+AA +
Sbjct: 67 VFELARTRLGDDHVVDLKGFGRVAESSLTREQEIRMGERGLPNSFVPGRNLVFFVYAAAV 126
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A R GI ++V G+CETD+SGYPDCR DT+ A++T +NLG+E + PLM+L K ETW
Sbjct: 127 ADRRGIDHLVGGMCETDFSGYPDCRKDTLEAMQTVLNLGIERPYRIDAPLMFLTKAETWA 186
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
L +GG LV+L+LE++HTCY+G+R +R+EWGYGC +CPAC LR +G+ +++ +
Sbjct: 187 LTHQLGGDALVDLVLEDTHTCYMGERGQRHEWGYGCGTCPACELRARGFEQWRNR 241
>gi|120608847|ref|YP_968525.1| exsB protein [Acidovorax citrulli AAC00-1]
gi|189038886|sp|A1TIG3|QUEC_ACIAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|120587311|gb|ABM30751.1| preQ(0) biosynthesis protein QueC [Acidovorax citrulli AAC00-1]
Length = 235
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 121/232 (52%), Positives = 171/232 (73%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A AL+LFSGGQDS+TCL+WAL+RF+RVET+ FDYGQR+ VELE R V + P
Sbjct: 2 RAGHALVLFSGGQDSTTCLAWALERFERVETIGFDYGQRHHVELEARTAVLAALRGRFPA 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LG+DH++ LA+LG IS ++LT++ A+++ + LPNTFVPGRN++F AA + YR
Sbjct: 62 WSARLGDDHMVDLAVLGQISDTALTRDTAIQMTEAGLPNTFVPGRNLLFFQLAAAVGYRR 121
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +V G+CETD+SGYPDCR DT++A++ A++LGM T+ TPLMW+ K ETW++A+
Sbjct: 122 GLHTLVGGMCETDFSGYPDCRDDTLKALQVALSLGMGQRFTIETPLMWIDKAETWEMARQ 181
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+GG +LV LI+E++HTCY G R + WG+GC CPAC LR+ G + ++
Sbjct: 182 LGGDELVQLIVEDTHTCYHGVRGALHAWGHGCGECPACALRRAGHERWTAQH 233
>gi|83859605|ref|ZP_00953125.1| hypothetical protein OA2633_06389 [Oceanicaulis alexandrii
HTCC2633]
gi|83851964|gb|EAP89818.1| hypothetical protein OA2633_06389 [Oceanicaulis alexandrii
HTCC2633]
Length = 239
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 123/234 (52%), Positives = 175/234 (74%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D + +AL+LFSGGQDS+TCL+WAL RF+RVET+ FDYGQR++VEL+ R VR ++++
Sbjct: 2 DTRASSNAALVLFSGGQDSATCLAWALSRFERVETIGFDYGQRHEVELKARQRVRDEMLK 61
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
P W + LGED ++ L+ G ++ S+LT ++ + + + LP+TFVPGRN++FL AA L
Sbjct: 62 AFPAWAERLGEDRLVDLSGYGALAESALTADMEIVMTEQGLPSTFVPGRNLVFLTVAAAL 121
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AYR GI +V G+C+TDYSGYPDCR DTI+ A+ LG++ + TPLM L K +TW
Sbjct: 122 AYRRGIDVLVGGMCQTDYSGYPDCREDTIQTQARALGLGLDRPTVIETPLMHLDKAQTWL 181
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA ++GG+ LV+LI+E SHTCY G+R +R++WGYGC+ CPAC LR+ GW +++E
Sbjct: 182 LAHELGGEALVDLIVEHSHTCYRGERGQRHDWGYGCDDCPACDLRKAGWNKWRE 235
>gi|58039976|ref|YP_191940.1| putative aluminum resistance protein [Gluconobacter oxydans 621H]
gi|81351795|sp|Q5FQR2|QUEC_GLUOX RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|58002390|gb|AAW61284.1| Putative aluminum resistance protein [Gluconobacter oxydans 621H]
Length = 242
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 130/232 (56%), Positives = 172/232 (74%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ +AL+LFSGGQDS+TCL+WAL RFDRVET+ + YGQR+ +ELECR +R ++ P
Sbjct: 4 SSNTALVLFSGGQDSATCLAWALSRFDRVETVGYAYGQRHAIELECRETLRNEMAAFSPD 63
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
WK LGEDH + LA LG +S ++LT+ + + +N LPNTFVPGRNIIFL FAA LA R
Sbjct: 64 WKARLGEDHTIDLASLGALSETALTREAEIGLSENGLPNTFVPGRNIIFLTFAAALAARR 123
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+IV GVCETDYSGYPDCR DTI+A++ +NLGM+ +HTPLMW+ K +TW L ++
Sbjct: 124 NARHIVTGVCETDYSGYPDCRDDTIKALQVTLNLGMDQRFVLHTPLMWIDKAQTWDLTEE 183
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+GGQ LVNLI +SH+CY+G R +++WGYGC +CPAC LR GW +++
Sbjct: 184 LGGQKLVNLINRDSHSCYMGDRTHQHDWGYGCGTCPACNLRADGWRRYQQSR 235
>gi|114799592|ref|YP_759261.1| exsB protein [Hyphomonas neptunium ATCC 15444]
gi|123028353|sp|Q0C4T2|QUEC_HYPNA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114739766|gb|ABI77891.1| exsB protein [Hyphomonas neptunium ATCC 15444]
Length = 239
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 124/233 (53%), Positives = 168/233 (72%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + SAL+LFSGGQDS+TCL+WALDRFDRVET+ FDYGQR+ +EL CR VR I ++
Sbjct: 1 MTQPISSALVLFSGGQDSATCLAWALDRFDRVETIGFDYGQRHAIELACRPKVRAAIRQM 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W + LGEDH++ +L + +++T V + + LPNTFVPGRN++F A LA
Sbjct: 61 SPVWAEKLGEDHMIDAGVLKSLGATAMTHEVEISMTAAGLPNTFVPGRNLLFFTLAGALA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI +V G+CETDYSGYPDCR DT++A E + LG+++ + + PLM+L K TW+L
Sbjct: 121 VRRGIGVLVGGMCETDYSGYPDCRADTLKAQEQTLRLGLDADIRIDAPLMYLDKAATWQL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
AQ++GG LV LI EE+HTCYLG+R R++WGYGC +CPAC LR GW +++
Sbjct: 181 AQELGGDALVALIGEETHTCYLGERGARHDWGYGCGTCPACELRSNGWQRWQD 233
>gi|319762211|ref|YP_004126148.1| exsb protein [Alicycliphilus denitrificans BC]
gi|317116772|gb|ADU99260.1| exsB protein [Alicycliphilus denitrificans BC]
Length = 239
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 119/230 (51%), Positives = 166/230 (72%), Gaps = 2/230 (0%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGGQDS+TCL+WAL R+ VET+ FDYGQR++ EL+CR +R + + W
Sbjct: 6 RRRALVLLSGGQDSATCLAWALARYAHVETIGFDYGQRHRAELDCRQRLRAGLQAM--PW 63
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG DH+L + +L + S++T+ VA+ +Q + LPNTFVPGRN++F AA LAYR G
Sbjct: 64 SGRLGPDHLLTVDVLAQLGGSAMTEEVAIAMQQDGLPNTFVPGRNLLFFTLAAALAYRRG 123
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+ ETDYSGYPDCR +T++A++ A++LG++ +T+ TPLMW+ K TW LA +
Sbjct: 124 LQVLVGGMSETDYSGYPDCRDNTLKALQVALSLGLDRPLTLETPLMWIDKAGTWALAHQL 183
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
GG LV LI +SHTCYLG+RD+ ++WGYGC CPAC LR +GW ++ EK
Sbjct: 184 GGDALVELIRRDSHTCYLGQRDRLHDWGYGCGRCPACELRAQGWAQWAEK 233
>gi|241764890|ref|ZP_04762892.1| exsB protein [Acidovorax delafieldii 2AN]
gi|241365549|gb|EER60291.1| exsB protein [Acidovorax delafieldii 2AN]
Length = 234
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 119/226 (52%), Positives = 166/226 (73%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WAL F+ VET+ FDYGQR++VEL+ R V + P+W++
Sbjct: 6 ALVLFSGGQDSTTCLAWALAHFEHVETIGFDYGQRHQVELQARQQVLTALRTAFPQWRER 65
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG+DH++ LA+LG IS ++LT+ + + LPNTFVPGRN++F AA + YR G+
Sbjct: 66 LGDDHMIDLAVLGQISDTALTRETEIVMDAAGLPNTFVPGRNLLFFQLAAAVGYRRGLHT 125
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+CETD+SGYPDCR DT++A++ A++LGM T TPLMWL K TW++A +GG
Sbjct: 126 LVGGMCETDFSGYPDCRDDTLKALQVAVSLGMGQRFTFETPLMWLDKAATWEMAHTLGGP 185
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LV++ILE+SHTCY G R+ R+ WGYGC +CPAC LR+ G+ ++
Sbjct: 186 ALVDIILEQSHTCYHGVREVRHAWGYGCGTCPACALRKAGYERWQA 231
>gi|289551433|ref|YP_003472337.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus lugdunensis
HKU09-01]
gi|315658942|ref|ZP_07911809.1| transcription regulator ExsB [Staphylococcus lugdunensis M23590]
gi|289180964|gb|ADC88209.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus lugdunensis
HKU09-01]
gi|315496066|gb|EFU84394.1| transcription regulator ExsB [Staphylococcus lugdunensis M23590]
Length = 223
Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 145/235 (61%), Gaps = 20/235 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + A+++FSGGQDS+TCL +A FD VE ++F+YGQR+ E+E +
Sbjct: 1 MTETTLNNNKAIVVFSGGQDSTTCLFYAKKHFDEVELVTFNYGQRHNTEIEVAKSIAH-- 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ HIL +++L ++ ++LT+ ++ ++ D+ +PNTFVP RN++FL FA
Sbjct: 59 --------EQGLAHHILDMSLLSQLTPNALTQHDMKIETNDDGMPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY+L +I+ GVCETD+SGYPDCR + I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQLNAKHIITGVCETDFSGYPDCRDNFIKSMNVTLSLAMDKDFVIHTPLMWLNKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
TW L+ ++G +++ I ++ TCY G G GC CPAC+LR +G ++
Sbjct: 171 TWALSDELG---VLDYIRHQTLTCYNGI------IGDGCGECPACHLRARGLQQY 216
>gi|330825968|ref|YP_004389271.1| exsB protein [Alicycliphilus denitrificans K601]
gi|329311340|gb|AEB85755.1| exsB protein [Alicycliphilus denitrificans K601]
Length = 239
Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 118/230 (51%), Positives = 165/230 (71%), Gaps = 2/230 (0%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGGQDS+TCL+WAL R+ VET+ FDYGQR++ EL+CR +R + + W
Sbjct: 6 RRRALVLLSGGQDSATCLAWALARYAHVETIGFDYGQRHRAELDCRQRLRAGLQAM--PW 63
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG DH+L + +L + S++T+ VA+ +Q + LPNTFVPGRN++F AA LAYR G
Sbjct: 64 SGRLGPDHLLTVDVLAQLGGSAMTEEVAIAMQQDGLPNTFVPGRNLLFFTLAAALAYRRG 123
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+ ETDYSGYPDCR +T++A++ A++LG++ +T+ TPLMW+ K TW LA +
Sbjct: 124 LQVLVGGMSETDYSGYPDCRDNTLKALQVALSLGLDRPLTLETPLMWIDKAGTWALAHQL 183
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
GG L LI +SHTCYLG+RD+ ++WGYGC CPAC LR +GW ++ EK
Sbjct: 184 GGDALAELIRRDSHTCYLGQRDRLHDWGYGCGRCPACELRAQGWAQWAEK 233
>gi|124265463|ref|YP_001019467.1| hypothetical protein Mpe_A0270 [Methylibium petroleiphilum PM1]
gi|189038926|sp|A2SCE3|QUEC_METPP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|124258238|gb|ABM93232.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 235
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 126/227 (55%), Positives = 168/227 (74%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGGQDS+ CL+WAL+ VET+ FDYGQR+ VELECR+ VR+ I P W
Sbjct: 5 PRGALVLFSGGQDSTACLAWALEHHAHVETIGFDYGQRHVVELECRVQVREAIARSFPLW 64
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L DH+L L +LG IS ++LT A+++Q N LP+TFVPGRN++FL FAAT+AYR
Sbjct: 65 AGRLANDHVLDLGLLGQISDTALTSARAIEMQANGLPSTFVPGRNLLFLGFAATVAYRRN 124
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ +V G+CETDYSGYPDCR +T++A++ A++LGM + +T+ TPLMWL K TW L +
Sbjct: 125 LSVLVGGMCETDYSGYPDCRDNTLKALQVALSLGMATPMTIETPLMWLDKARTWALTDRL 184
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
GG+ L LILE +H+CYLG R R+ WGYGCN+CPAC LR+KG+ +
Sbjct: 185 GGRALNELILEHTHSCYLGDRSVRHAWGYGCNACPACELRRKGYEAW 231
>gi|228475297|ref|ZP_04060021.1| ExsB protein [Staphylococcus hominis SK119]
gi|314936989|ref|ZP_07844336.1| ExsB protein [Staphylococcus hominis subsp. hominis C80]
gi|228270673|gb|EEK12087.1| ExsB protein [Staphylococcus hominis SK119]
gi|313655608|gb|EFS19353.1| ExsB protein [Staphylococcus hominis subsp. hominis C80]
Length = 225
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 150/241 (62%), Gaps = 20/241 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + + + A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + K
Sbjct: 1 MPNSVLNSEKAIVVFSGGQDSTTCLFYAKRHFKEVELVTFNYGQRHNTEIEVASKIAK-- 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
D + HIL +++L ++ ++LTK ++ ++ ++ +PNTFVP RN++FL FA
Sbjct: 59 --------DQGLKHHILDMSLLSQLTPNALTKHDMTIETGEDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQVNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDRDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TW+L+ ++G ++N + + TCY G G GC CPAC LRQ+G ++ E+
Sbjct: 171 TWELSDELG---VLNYVRHNTLTCYNGI------IGDGCGKCPACKLRQRGLHQYLEQKG 221
Query: 240 D 240
D
Sbjct: 222 D 222
>gi|46581063|ref|YP_011871.1| exsB protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601646|ref|YP_966046.1| exsB protein [Desulfovibrio vulgaris DP4]
gi|81404359|sp|Q728E4|QUEC_DESVH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016424|sp|A1VB03|QUEC_DESVV RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|46450484|gb|AAS97131.1| exsB protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120561875|gb|ABM27619.1| preQ(0) biosynthesis protein QueC [Desulfovibrio vulgaris DP4]
gi|311234740|gb|ADP87594.1| exsB protein [Desulfovibrio vulgaris RCH1]
Length = 242
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 125/225 (55%), Positives = 168/225 (74%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL++FSGGQDS+TCL WAL+RF V T+ F YGQR+ VE++CR V I ++ P WK
Sbjct: 7 NALVIFSGGQDSTTCLGWALNRFRTVATIGFHYGQRHDVEMQCRQDVLAAIGDVRPGWKA 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG D ++ + + ++ ++LT +VA+++ N LP+TFVPGRN++FL AA AYR GI
Sbjct: 67 HLGTDTVVEMGLFRELGETALTHDVAIEMGRNGLPSTFVPGRNLMFLTAAAACAYRQGIR 126
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++V+GVCETD+SGYPDCR D ++A++ A+NLGMES VHTPLMWL K +TW +A+D GG
Sbjct: 127 HLVLGVCETDFSGYPDCRDDAMKAMQVALNLGMESRFVVHTPLMWLTKAQTWDMARDEGG 186
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
QD V L+LE SHTCY G RD R+ WGYGC +CPAC LR+ GW +
Sbjct: 187 QDFVELVLERSHTCYKGVRDVRHPWGYGCGTCPACELRRAGWDAY 231
>gi|121595065|ref|YP_986961.1| exsB protein [Acidovorax sp. JS42]
gi|222111408|ref|YP_002553672.1| exsb protein [Acidovorax ebreus TPSY]
gi|189038887|sp|A1W9G0|QUEC_ACISJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764333|sp|B9MBJ3|QUEC_ACIET RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|120607145|gb|ABM42885.1| preQ(0) biosynthesis protein QueC [Acidovorax sp. JS42]
gi|221730852|gb|ACM33672.1| exsB protein [Acidovorax ebreus TPSY]
Length = 239
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 119/231 (51%), Positives = 162/231 (70%), Gaps = 2/231 (0%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGGQDS+TCL+WAL R+ VETL FDYGQR++VEL+CR + + L W
Sbjct: 6 QRRALVLLSGGQDSATCLAWALARYGHVETLGFDYGQRHRVELDCRQRLIDGVRAL--PW 63
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG DH+L + +L + S++T +VA+ +Q + LPNTFVPGRN++F AA LAYR G
Sbjct: 64 PGQLGPDHMLTVDVLAQLGGSAMTDDVAIAMQADGLPNTFVPGRNLLFFTLAAALAYRRG 123
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G+ ETDYSGYPDCR T++A++ A++LG++ +T+ TPLMW K +TW LAQ +
Sbjct: 124 LDVLVGGMSETDYSGYPDCRDSTLKALQVALSLGVDRPLTLETPLMWRSKADTWALAQRL 183
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
GG LV LI ESHTCYLG+R + WG+GC CPAC LR +GW ++ +
Sbjct: 184 GGDALVELIRCESHTCYLGQRGDLHAWGHGCGGCPACELRAQGWEQWTAQR 234
>gi|91786636|ref|YP_547588.1| ExsB [Polaromonas sp. JS666]
gi|118574292|sp|Q12FK2|QUEC_POLSJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91695861|gb|ABE42690.1| preQ(0) biosynthesis protein QueC [Polaromonas sp. JS666]
Length = 235
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 131/228 (57%), Positives = 176/228 (77%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
SAL+LFSGGQDS+TCL+ AL +++RVET++FDYGQR+KVEL+ RL V ++I P
Sbjct: 1 MHTSALVLFSGGQDSTTCLAQALSKYERVETVAFDYGQRHKVELDARLNVLREIKSRFPH 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W LGEDH+L LA+LG +S +SLT++VA K++++ LPNTFVPGRN++FL AA LAYR
Sbjct: 61 WAPKLGEDHLLDLAVLGQVSDTSLTRDVAFKMENSGLPNTFVPGRNLLFLTLAAALAYRR 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ +V GVCETD+SGYPDCR DTI+A++ A++LGM+ + TPLMW+ K +TW+LA
Sbjct: 121 DLQVLVTGVCETDFSGYPDCRDDTIKAMQLALSLGMDKRFLIETPLMWIDKADTWRLAHA 180
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+GGQ LV+LI+E +HTCYLG R R WGYGC +CPAC LR +G+ +
Sbjct: 181 LGGQALVDLIIEHTHTCYLGDRTHRQAWGYGCGACPACELRARGYERY 228
>gi|13474943|ref|NP_106513.1| hypothetical protein mll5936 [Mesorhizobium loti MAFF303099]
gi|81777876|sp|Q98AM3|QUEC2_RHILO RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
gi|14025699|dbj|BAB52299.1| mll5936 [Mesorhizobium loti MAFF303099]
Length = 245
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 123/233 (52%), Positives = 167/233 (71%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +AL+LFSGGQDS+TCL+WAL+ F+RVET+ FDYGQR+++EL+ R + ++I
Sbjct: 1 MQRDPGTALVLFSGGQDSTTCLAWALENFERVETIGFDYGQRHRIELDVRPYLLERIRTD 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W+ LG DH++ +A+LG IS ++LT+ V + + N LPNTFVPGRN++FL FAA LA
Sbjct: 61 FPAWRGRLGGDHMIDMAVLGQISDTALTRGVEVALNANGLPNTFVPGRNLLFLGFAAALA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YRL ++VIGV ETD YPDCR D ++AI+ A+NLGME +HTPLM K +TW L
Sbjct: 121 YRLSAKHLVIGVAETDRFSYPDCRDDAVKAIQLALNLGMEKRFIIHTPLMHRDKAQTWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A +GG+ LV LI E SHTCY G R+ R+ WG+GC +C C LR GW +F+
Sbjct: 181 ADWLGGEALVKLICEGSHTCYSGDREHRHSWGFGCGTCIECNLRAAGWEQFRS 233
>gi|121998595|ref|YP_001003382.1| exsB protein [Halorhodospira halophila SL1]
gi|189038918|sp|A1WY18|QUEC_HALHL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|121590000|gb|ABM62580.1| preQ(0) biosynthesis protein QueC [Halorhodospira halophila SL1]
Length = 247
Score = 297 bits (762), Expect = 7e-79, Method: Composition-based stats.
Identities = 121/233 (51%), Positives = 162/233 (69%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ SAL+LFSGGQDS+ CL+WAL+ F RVET+ F YGQR+ VEL R V +
Sbjct: 9 PASTEQESALVLFSGGQDSTACLAWALEYFSRVETVGFAYGQRHDVELSAREEVLDGLRA 68
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L P W LG D +L +LG+IS ++LT++ + LP TFVPGRN++F AA +
Sbjct: 69 LRPDWAARLGSDRVLDAGVLGEISDTALTQDAEIAYDARGLPTTFVPGRNLLFFTLAAAV 128
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A+R GI ++V GVCETD+SGYPDCR DT+++++ +NLGM + +HTPLMWL K +TW
Sbjct: 129 AHRRGIRHLVAGVCETDFSGYPDCRDDTVKSLQVTLNLGMAERLVLHTPLMWLDKAQTWM 188
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
LA+ +GG LV+L +E SHTCY G R++R+EWGYGC CPAC LR +GW F+
Sbjct: 189 LAEQLGGSALVDLTVEASHTCYYGMREQRHEWGYGCGECPACRLRAEGWHRFR 241
>gi|258423361|ref|ZP_05686252.1| exsB protein [Staphylococcus aureus A9635]
gi|257846422|gb|EEV70445.1| exsB protein [Staphylococcus aureus A9635]
Length = 222
Score = 297 bits (762), Expect = 7e-79, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 150/238 (63%), Gaps = 21/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ A+++FSGGQDS+TCL +A +F VE ++F+YGQR+ E+E + +
Sbjct: 1 MESVLN-NEKAIVVFSGGQDSTTCLFYAKKQFKEVELVTFNYGQRHDTEIEVAKQIAQ-- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
D + H+L +++L ++ ++LT+ ++ + ++ +PNTFVP RN++FL FA
Sbjct: 58 --------DQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARNLLFLSFA 109
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++G +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K E
Sbjct: 110 GALAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAE 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TWKL+ ++ ++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 170 TWKLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLES 218
>gi|300023283|ref|YP_003755894.1| exsB protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525104|gb|ADJ23573.1| exsB protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 232
Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats.
Identities = 121/228 (53%), Positives = 166/228 (72%), Gaps = 2/228 (0%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SAL+LFSGGQDS+ CL+WALDR++RVET+ F YGQR+ VEL R +R K+ L
Sbjct: 5 SALVLFSGGQDSTVCLAWALDRYERVETVGFTYGQRHAVELAQRPVIRSKLANLSG--GS 62
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG+D +L L L IS ++LT+ + LP TFVPGRN++FL +AA LAYR GI
Sbjct: 63 KLGDDAVLDLPALQSISDTALTRETEITFAATGLPTTFVPGRNLLFLTYAAALAYRRGIG 122
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETD+SGYPDCR+ T++A+ A++LG+++H+ + TPLM++ K TW LA +GG
Sbjct: 123 TLVGGMCETDFSGYPDCRNATVQALAQALSLGLDTHLEIETPLMFIDKAATWDLADKLGG 182
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LV+LI+E++HTCYLG R R+ WGYGC +CPAC LR KGW E++ +
Sbjct: 183 KALVDLIVEDTHTCYLGDRSHRHAWGYGCGTCPACELRAKGWNEWQAR 230
>gi|162148727|ref|YP_001603188.1| succinoglycan protein [Gluconacetobacter diazotrophicus PAl 5]
gi|189038916|sp|A9HRF6|QUEC_GLUDA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|161787304|emb|CAP56898.1| Succinoglycan protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 245
Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats.
Identities = 133/233 (57%), Positives = 171/233 (73%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+A++LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ VEL CR +R + L P W
Sbjct: 12 QEAAIVLFSGGQDSATCLAWALSRFGRVETVGFDYGQRHAVELACRARLRDGMAALDPDW 71
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH L L LG +S ++LT++ A+ + +N LP+TFVPGRN+IFL FAA LA R G
Sbjct: 72 ATRLGQDHTLALDALGTVSDTALTRDAAITMNENGLPSTFVPGRNLIFLTFAAALAARRG 131
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+IV G+CETDYSGYPDCR DTI+A++ A+NLGM S +HTPLMW+ K ETW++A+ +
Sbjct: 132 ARHIVGGMCETDYSGYPDCRDDTIKAMQVALNLGMASRYVLHTPLMWIDKAETWRMAEGL 191
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
GG DLV LI ESH+CYLG RD + WG+GC +CPAC LR+ GW + D
Sbjct: 192 GGADLVELINRESHSCYLGVRDVMHPWGHGCGTCPACMLRRAGWERYVADGAD 244
>gi|121603547|ref|YP_980876.1| exsB protein [Polaromonas naphthalenivorans CJ2]
gi|120592516|gb|ABM35955.1| preQ(0) biosynthesis protein QueC [Polaromonas naphthalenivorans
CJ2]
Length = 241
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 132/237 (55%), Positives = 179/237 (75%), Gaps = 1/237 (0%)
Query: 1 MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M + +A SAL+LFSGGQDS+TCL+ AL +++RVET++FDYGQR+KVEL+ RL V ++
Sbjct: 3 MPAPVSRAHTSALVLFSGGQDSTTCLAQALAKYERVETIAFDYGQRHKVELQARLNVLRE 62
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ P+W LGEDH+L LA+LG +S SLT++VA K++ + LPNTFVPGRN++FL A
Sbjct: 63 LKSQFPQWAAKLGEDHLLDLAVLGQVSDCSLTRDVAFKMESSGLPNTFVPGRNLLFLTLA 122
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LAYR + +V GVCETD+SGYPDCR DT++A++ A++LGM+ + TPLMW+ K +
Sbjct: 123 AALAYRRDLQVLVTGVCETDFSGYPDCRDDTMKAMQLALSLGMDKRFLIETPLMWIDKAD 182
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
TW LA+ +GGQ LV LI+E +HTCYLG R R+ WGYGC CPAC LR +G+ + E
Sbjct: 183 TWALAESLGGQPLVELIIEHTHTCYLGDRIHRHAWGYGCGQCPACELRARGYARYAE 239
>gi|282926575|ref|ZP_06334205.1| exsB protein [Staphylococcus aureus A10102]
gi|282591468|gb|EFB96540.1| exsB protein [Staphylococcus aureus A10102]
Length = 222
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + +
Sbjct: 1 MESVLN-NEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKQIAQ-- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
D + H+L +++L ++ ++LT+ ++ + ++ +PNTFVP RN++FL FA
Sbjct: 58 --------DQGMKHHVLDMSLLSQLTPNALTQHDIEITNNEDGIPNTFVPARNLLFLSFA 109
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++G +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K E
Sbjct: 110 GALAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAE 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TWKL+ ++ ++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 170 TWKLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLES 218
>gi|189039056|sp|A1VJX7|QUEC_POLNA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 239
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 132/237 (55%), Positives = 179/237 (75%), Gaps = 1/237 (0%)
Query: 1 MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M + +A SAL+LFSGGQDS+TCL+ AL +++RVET++FDYGQR+KVEL+ RL V ++
Sbjct: 1 MPAPVSRAHTSALVLFSGGQDSTTCLAQALAKYERVETIAFDYGQRHKVELQARLNVLRE 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ P+W LGEDH+L LA+LG +S SLT++VA K++ + LPNTFVPGRN++FL A
Sbjct: 61 LKSQFPQWAAKLGEDHLLDLAVLGQVSDCSLTRDVAFKMESSGLPNTFVPGRNLLFLTLA 120
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LAYR + +V GVCETD+SGYPDCR DT++A++ A++LGM+ + TPLMW+ K +
Sbjct: 121 AALAYRRDLQVLVTGVCETDFSGYPDCRDDTMKAMQLALSLGMDKRFLIETPLMWIDKAD 180
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
TW LA+ +GGQ LV LI+E +HTCYLG R R+ WGYGC CPAC LR +G+ + E
Sbjct: 181 TWALAESLGGQPLVELIIEHTHTCYLGDRIHRHAWGYGCGQCPACELRARGYARYAE 237
>gi|329889513|ref|ZP_08267856.1| queuosine biosynthesis protein queC [Brevundimonas diminuta ATCC
11568]
gi|328844814|gb|EGF94378.1| queuosine biosynthesis protein queC [Brevundimonas diminuta ATCC
11568]
Length = 234
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 126/224 (56%), Positives = 168/224 (75%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +AL+LFSGGQDS+TCL+WAL+RFDRVET+ FDYGQR+ VE++ R VR+++V+
Sbjct: 1 MQHSEKTALVLFSGGQDSATCLAWALERFDRVETVGFDYGQRHAVEMQARQSVREELVKA 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+P+W D LG+DH++ L G I +++T A++ LPNTFVPGRN+IFLV AA LA
Sbjct: 61 LPQWADRLGDDHVVDLTGFGAIGETAMTTERAIEADARGLPNTFVPGRNLIFLVAAAALA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ ++ G+CETDYSGYPDCR+DTI+A A++LG++ V V TPLM+L K +TW+L
Sbjct: 121 DRRGLEVLIGGMCETDYSGYPDCRNDTIQATARALSLGLDKSVPVETPLMFLTKAQTWEL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
A IGG+ LV I+E SHTCYLG R R+ WGYGC +CPAC LR
Sbjct: 181 ADQIGGRVLVKAIIEFSHTCYLGDRTHRHVWGYGCGACPACELR 224
>gi|163858842|ref|YP_001633140.1| putative exsB protein [Bordetella petrii DSM 12804]
gi|163262570|emb|CAP44873.1| putative exsB protein [Bordetella petrii]
Length = 238
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 127/237 (53%), Positives = 178/237 (75%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + AL+LFSGGQDS+TCL+WALDR+ VET++FDYGQR+++EL+ RL V +++
Sbjct: 1 MQNHSRRALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHRIELDARLNVLRELRAQ 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P+W LGEDH+L L +LG + +++T A+++Q N LPNTFVPGRN++FL AA L
Sbjct: 61 FPQWAGRLGEDHLLDLRVLGQVGDTAMTSERAIEMQANGLPNTFVPGRNLLFLALAAALG 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V G+CETD+SGYPDCR DTI+A + A+ LG+ + VT+ TPLMW+ K +TW L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGTRVTIETPLMWIDKADTWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A+ +GGQ LV LI+E SHTCYLG+R R++WGYGC +CPAC LR+ GW ++++ D
Sbjct: 181 ARQLGGQALVALIVEHSHTCYLGERGARHDWGYGCGTCPACALRKAGWQRWRDQAGD 237
>gi|209545506|ref|YP_002277735.1| exsB protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209533183|gb|ACI53120.1| exsB protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 245
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 133/233 (57%), Positives = 171/233 (73%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+A++LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ VEL CR +R + L P W
Sbjct: 12 QEAAIVLFSGGQDSATCLAWALSRFGRVETVGFDYGQRHAVELACRARLRDGMAALDPDW 71
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG+DH L L LG +S ++LT++ A+ + +N LP+TFVPGRN+IFL FAA LA R G
Sbjct: 72 ATRLGQDHTLALDALGAVSDTALTRDAAITMNENGLPSTFVPGRNLIFLTFAAALAARRG 131
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+IV G+CETDYSGYPDCR DTI+A++ A+NLGM S +HTPLMW+ K ETW++A+ +
Sbjct: 132 ARHIVGGMCETDYSGYPDCRDDTIKAMQVALNLGMASRYVLHTPLMWIDKAETWRMAEGV 191
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
GG DLV LI ESH+CYLG RD + WG+GC +CPAC LR+ GW + D
Sbjct: 192 GGADLVELINRESHSCYLGVRDVMHPWGHGCGTCPACMLRRAGWERYVADGAD 244
>gi|15923702|ref|NP_371236.1| aluminum resistance protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926389|ref|NP_373922.1| hypothetical protein SA0667 [Staphylococcus aureus subsp. aureus
N315]
gi|21282403|ref|NP_645491.1| hypothetical protein MW0674 [Staphylococcus aureus subsp. aureus
MW2]
gi|49482968|ref|YP_040192.1| hypothetical protein SAR0765 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485584|ref|YP_042805.1| hypothetical protein SAS0677 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651551|ref|YP_185649.1| exsB protein [Staphylococcus aureus subsp. aureus COL]
gi|87160495|ref|YP_493400.1| exsB protein [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194486|ref|YP_499280.1| hypothetical protein SAOUHSC_00721 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267172|ref|YP_001246115.1| exsB protein [Staphylococcus aureus subsp. aureus JH9]
gi|150393220|ref|YP_001315895.1| exsB protein [Staphylococcus aureus subsp. aureus JH1]
gi|151220893|ref|YP_001331715.1| hypothetical protein NWMN_0681 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979040|ref|YP_001441299.1| hypothetical protein SAHV_0709 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161508976|ref|YP_001574635.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221140928|ref|ZP_03565421.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|253315351|ref|ZP_04838564.1| exsB protein [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253731335|ref|ZP_04865500.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253732844|ref|ZP_04867009.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus TCH130]
gi|255005504|ref|ZP_05144105.2| exsB protein [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424831|ref|ZP_05601258.1| exsB protein [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427499|ref|ZP_05603898.1| exsB protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430130|ref|ZP_05606514.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus 68-397]
gi|257432832|ref|ZP_05609192.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus E1410]
gi|257435736|ref|ZP_05611784.1| exsB protein [Staphylococcus aureus subsp. aureus M876]
gi|257794967|ref|ZP_05643946.1| exsB protein [Staphylococcus aureus A9781]
gi|258418284|ref|ZP_05682549.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9763]
gi|258421581|ref|ZP_05684506.1| exsB protein [Staphylococcus aureus A9719]
gi|258430774|ref|ZP_05688486.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9299]
gi|258441733|ref|ZP_05691005.1| queuosine biosynthesis protein queC [Staphylococcus aureus A8115]
gi|258445825|ref|ZP_05694002.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6300]
gi|258449636|ref|ZP_05697738.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6224]
gi|258452920|ref|ZP_05700914.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5948]
gi|258454037|ref|ZP_05702009.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5937]
gi|262048447|ref|ZP_06021332.1| hypothetical protein SAD30_2174 [Staphylococcus aureus D30]
gi|262052794|ref|ZP_06024982.1| hypothetical protein SA930_0351 [Staphylococcus aureus 930918-3]
gi|269202332|ref|YP_003281601.1| exsB protein [Staphylococcus aureus subsp. aureus ED98]
gi|282894477|ref|ZP_06302706.1| exsB protein [Staphylococcus aureus A8117]
gi|282903339|ref|ZP_06311230.1| ExsB protein [Staphylococcus aureus subsp. aureus C160]
gi|282905119|ref|ZP_06312977.1| exsB protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908096|ref|ZP_06315927.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910356|ref|ZP_06318160.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282913549|ref|ZP_06321338.1| ExsB protein [Staphylococcus aureus subsp. aureus M899]
gi|282916050|ref|ZP_06323813.1| exsB protein [Staphylococcus aureus subsp. aureus D139]
gi|282918502|ref|ZP_06326239.1| exsB protein [Staphylococcus aureus subsp. aureus C427]
gi|282922004|ref|ZP_06329701.1| exsB protein [Staphylococcus aureus A9765]
gi|282923467|ref|ZP_06331147.1| exsB protein [Staphylococcus aureus subsp. aureus C101]
gi|283769874|ref|ZP_06342766.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus H19]
gi|283957541|ref|ZP_06374994.1| ExsB protein [Staphylococcus aureus subsp. aureus A017934/97]
gi|284023734|ref|ZP_06378132.1| exsB protein [Staphylococcus aureus subsp. aureus 132]
gi|293500596|ref|ZP_06666447.1| exsB protein [Staphylococcus aureus subsp. aureus 58-424]
gi|293509542|ref|ZP_06668253.1| exsB protein [Staphylococcus aureus subsp. aureus M809]
gi|293524128|ref|ZP_06670815.1| ExsB protein [Staphylococcus aureus subsp. aureus M1015]
gi|294849381|ref|ZP_06790124.1| exsB protein [Staphylococcus aureus A9754]
gi|295406430|ref|ZP_06816236.1| exsB protein [Staphylococcus aureus A8819]
gi|295427288|ref|ZP_06819923.1| exsB protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296274776|ref|ZP_06857283.1| exsB protein [Staphylococcus aureus subsp. aureus MR1]
gi|297208564|ref|ZP_06924993.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245157|ref|ZP_06929031.1| exsB protein [Staphylococcus aureus A8796]
gi|297590361|ref|ZP_06949000.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
MN8]
gi|300912656|ref|ZP_07130099.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
TCH70]
gi|304381673|ref|ZP_07364322.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|81649771|sp|Q6GBB8|QUEC_STAAS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81651556|sp|Q6GIT0|QUEC_STAAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81695012|sp|Q5HHV8|QUEC_STAAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81704614|sp|Q7A1I5|QUEC_STAAW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81706049|sp|Q7A6U7|QUEC_STAAN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81781962|sp|Q99VR1|QUEC_STAAM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816263|sp|Q2FIS8|QUEC_STAA3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816264|sp|Q2G1X6|QUEC_STAA8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029535|sp|A7WZJ4|QUEC_STAA1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029536|sp|A6TZJ0|QUEC_STAA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029537|sp|A5IQR6|QUEC_STAA9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029538|sp|A6QF21|QUEC_STAAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029539|sp|A8YZY3|QUEC_STAAT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|13700603|dbj|BAB41900.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246481|dbj|BAB56874.1| similar to aluminum resistance protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|21203840|dbj|BAB94539.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49241097|emb|CAG39775.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244027|emb|CAG42453.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285737|gb|AAW37831.1| exsB protein [Staphylococcus aureus subsp. aureus COL]
gi|87126469|gb|ABD20983.1| exsB protein [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202044|gb|ABD29854.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740241|gb|ABQ48539.1| exsB protein [Staphylococcus aureus subsp. aureus JH9]
gi|149945672|gb|ABR51608.1| exsB protein [Staphylococcus aureus subsp. aureus JH1]
gi|150373693|dbj|BAF66953.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721175|dbj|BAF77592.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367785|gb|ABX28756.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253725076|gb|EES93805.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253729209|gb|EES97938.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus TCH130]
gi|257272401|gb|EEV04524.1| exsB protein [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275692|gb|EEV07165.1| exsB protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279327|gb|EEV09928.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus 68-397]
gi|257282247|gb|EEV12382.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus E1410]
gi|257284927|gb|EEV15046.1| exsB protein [Staphylococcus aureus subsp. aureus M876]
gi|257788939|gb|EEV27279.1| exsB protein [Staphylococcus aureus A9781]
gi|257839077|gb|EEV63556.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9763]
gi|257842507|gb|EEV66931.1| exsB protein [Staphylococcus aureus A9719]
gi|257849446|gb|EEV73416.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9299]
gi|257852202|gb|EEV76129.1| queuosine biosynthesis protein queC [Staphylococcus aureus A8115]
gi|257855401|gb|EEV78339.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6300]
gi|257857144|gb|EEV80043.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6224]
gi|257859431|gb|EEV82285.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5948]
gi|257863902|gb|EEV86658.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5937]
gi|259159335|gb|EEW44391.1| hypothetical protein SA930_0351 [Staphylococcus aureus 930918-3]
gi|259163535|gb|EEW48092.1| hypothetical protein SAD30_2174 [Staphylococcus aureus D30]
gi|262074622|gb|ACY10595.1| exsB protein [Staphylococcus aureus subsp. aureus ED98]
gi|269940289|emb|CBI48666.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314335|gb|EFB44725.1| exsB protein [Staphylococcus aureus subsp. aureus C101]
gi|282317636|gb|EFB48008.1| exsB protein [Staphylococcus aureus subsp. aureus C427]
gi|282319998|gb|EFB50345.1| exsB protein [Staphylococcus aureus subsp. aureus D139]
gi|282322581|gb|EFB52903.1| ExsB protein [Staphylococcus aureus subsp. aureus M899]
gi|282325748|gb|EFB56056.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282327761|gb|EFB58043.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331944|gb|EFB61455.1| exsB protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282593662|gb|EFB98654.1| exsB protein [Staphylococcus aureus A9765]
gi|282596294|gb|EFC01255.1| ExsB protein [Staphylococcus aureus subsp. aureus C160]
gi|282763190|gb|EFC03321.1| exsB protein [Staphylococcus aureus A8117]
gi|283460021|gb|EFC07111.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus H19]
gi|283470006|emb|CAQ49217.1| ExsB protein [Staphylococcus aureus subsp. aureus ST398]
gi|283790992|gb|EFC29807.1| ExsB protein [Staphylococcus aureus subsp. aureus A017934/97]
gi|285816413|gb|ADC36900.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus aureus 04-02981]
gi|290921091|gb|EFD98152.1| ExsB protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095601|gb|EFE25862.1| exsB protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291467639|gb|EFF10154.1| exsB protein [Staphylococcus aureus subsp. aureus M809]
gi|294823913|gb|EFG40339.1| exsB protein [Staphylococcus aureus A9754]
gi|294968575|gb|EFG44598.1| exsB protein [Staphylococcus aureus A8819]
gi|295128676|gb|EFG58307.1| exsB protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886819|gb|EFH25723.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177828|gb|EFH37077.1| exsB protein [Staphylococcus aureus A8796]
gi|297576660|gb|EFH95375.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
MN8]
gi|298694041|gb|ADI97263.1| aluminum resistance protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886902|gb|EFK82104.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
TCH70]
gi|302750610|gb|ADL64787.1| queuosine biosynthesis protein QueC [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339776|gb|EFM05721.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312438866|gb|ADQ77937.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
TCH60]
gi|312829205|emb|CBX34047.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129387|gb|EFT85380.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus CGS03]
gi|315194328|gb|EFU24720.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus CGS00]
gi|315197688|gb|EFU28023.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
subsp. aureus CGS01]
gi|320139956|gb|EFW31817.1| ExsB protein [Staphylococcus aureus subsp. aureus MRSA131]
gi|320141954|gb|EFW33782.1| ExsB protein [Staphylococcus aureus subsp. aureus MRSA177]
gi|323438939|gb|EGA96674.1| aluminum resistance protein [Staphylococcus aureus O11]
gi|323441588|gb|EGA99237.1| aluminum resistance protein [Staphylococcus aureus O46]
gi|329313434|gb|AEB87847.1| 7-cyano-7-deazaguanine synthase [Staphylococcus aureus subsp.
aureus T0131]
gi|329724593|gb|EGG61100.1| queuosine biosynthesis protein QueC [Staphylococcus aureus subsp.
aureus 21172]
gi|329728517|gb|EGG64950.1| protein ExsB [Staphylococcus aureus subsp. aureus 21189]
gi|329729639|gb|EGG66040.1| protein ExsB [Staphylococcus aureus subsp. aureus 21193]
Length = 222
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + +
Sbjct: 1 MESVLN-NEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKQIAQ-- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
D + H+L +++L ++ ++LT+ ++ + ++ +PNTFVP RN++FL FA
Sbjct: 58 --------DQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARNLLFLSFA 109
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++G +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K E
Sbjct: 110 GALAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAE 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TWKL+ ++ ++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 170 TWKLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLES 218
>gi|317401137|gb|EFV81788.1| queuosine biosynthesis protein queC [Achromobacter xylosoxidans
C54]
Length = 237
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 128/234 (54%), Positives = 174/234 (74%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ AL+LFSGGQDS+TCL+WALDR+ VET++FDYGQR+++EL+ RL V + I
Sbjct: 1 MLNHQRRALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHRIELDARLNVLRDIRAR 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P+W LGEDH+L L +LG + +++T + A+++Q N LPNTFVPGRN++FL AA L
Sbjct: 61 FPQWAPRLGEDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALG 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V G+CETD+SGYPDCR DTI+A + A+ LG+ S VT+ TPLMW+ K ETW L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGSRVTIETPLMWIDKSETWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A+ +GG LV I+EESHTCYLG+R R+ WGYGC CPAC LR+ GW +++ +
Sbjct: 181 ARSLGGDALVETIVEESHTCYLGERGARHAWGYGCGECPACKLRRAGWDKWQAQ 234
>gi|20804095|emb|CAD31298.1| CONSERVED HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A]
Length = 245
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 122/232 (52%), Positives = 171/232 (73%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +AL+LFSGGQDS+TCL+WAL+ F+RVET+ FDYGQR+++EL+ R + +I
Sbjct: 1 MQRDPGTALVLFSGGQDSTTCLAWALENFERVETIGFDYGQRHRIELDVRPYLLGRIRTD 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W+ LGEDH++ +A+LG IS ++LT++V + + N L NTFVPGRN++FL FAA +A
Sbjct: 61 FPAWRGRLGEDHMIDMAVLGQISDTALTRDVEVALNANGLTNTFVPGRNLLFLGFAAAIA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR+G ++VIGV ETD YPDCR D ++A++ A+NLGME+H+ +HTPLM K +TW L
Sbjct: 121 YRMGAKHLVIGVSETDRFSYPDCRDDAVKAMQLALNLGMETHLVIHTPLMRRDKAQTWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A +GG+ LV LI E SHTCY G R+ R+ WG+GC +C C LR GW +F+
Sbjct: 181 AGWLGGEVLVKLICEGSHTCYSGDREHRHSWGFGCGTCIECNLRAAGWEQFR 232
>gi|121611883|ref|YP_999690.1| exsB protein [Verminephrobacter eiseniae EF01-2]
gi|189029332|sp|A1WSR5|QUEC_VEREI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|121556523|gb|ABM60672.1| exsB protein [Verminephrobacter eiseniae EF01-2]
Length = 237
Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 118/231 (51%), Positives = 167/231 (72%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A AL+LFSGGQDS+TCL+WAL +F VET+ FDYGQR+ VEL+ R V I +
Sbjct: 2 RAGHALVLFSGGQDSTTCLAWALTQFAHVETIGFDYGQRHHVELQARQTVLAAIRSRFAQ 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
W++ LG DH++ L++LG IS ++LT++ A+++ LPNTFVPGRN++F AA + YR
Sbjct: 62 WRERLGADHMIDLSVLGRISDTALTRDSAIQLSAAGLPNTFVPGRNLLFFNLAAAVGYRR 121
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +V G+CETD+SGYPDCR D+++A++ A++LG+ T TPLMWL K TW+LA+
Sbjct: 122 GLHTLVGGMCETDFSGYPDCRDDSLKALQVAVSLGLGQRFTFETPLMWLDKAATWELARS 181
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+GGQ LV LI+ +SHTCY G R + WG+GC +CPAC LRQ G+ ++ +
Sbjct: 182 LGGQALVELIVRDSHTCYHGVRGVLHAWGHGCGTCPACVLRQTGYDRWQAR 232
>gi|70727185|ref|YP_254101.1| hypothetical protein SH2186 [Staphylococcus haemolyticus JCSC1435]
gi|110816266|sp|Q4L4D0|QUEC_STAHJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|68447911|dbj|BAE05495.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 223
Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 144/237 (60%), Gaps = 20/237 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + K
Sbjct: 1 MTNQNLNKDKAIVVFSGGQDSTTCLFYAKKHFKDVELVTFNYGQRHDAEIEVATRIAK-- 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + HIL +++L ++ ++LT+ ++ ++ ++ +PNTFVP RN++FL FA
Sbjct: 59 --------EQNLKHHILDMSLLSQLTPNALTQHDMDIETGEDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY+ +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQRNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
TW+L+ ++G +++ I + TCY G G GC CPAC LRQ+G + E
Sbjct: 171 TWELSDELG---VLDYIRHNTLTCYNGV------IGDGCGECPACQLRQRGLQHYLE 218
>gi|295401299|ref|ZP_06811271.1| exsB protein [Geobacillus thermoglucosidasius C56-YS93]
gi|312111881|ref|YP_003990197.1| exsB protein [Geobacillus sp. Y4.1MC1]
gi|294976706|gb|EFG52312.1| exsB protein [Geobacillus thermoglucosidasius C56-YS93]
gi|311216982|gb|ADP75586.1| exsB protein [Geobacillus sp. Y4.1MC1]
Length = 222
Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 151/236 (63%), Gaps = 20/236 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WAL +FD VE ++FDYGQR+++E+E + K++
Sbjct: 1 MGKKEKAVVVFSGGQDSTTCLFWALKQFDEVEAVTFDYGQRHRLEIEVAASIAKELG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L +++L ++ ++LT+ ++A++ +D LP+TFV GRN++FL FAA LA
Sbjct: 58 -------ISHTVLDMSLLNQLAPNALTRSDIAIEQKDGQLPSTFVDGRNLLFLSFAAVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TWKL
Sbjct: 111 KQKGARHLVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYQFVIHTPLMWLTKAQTWKL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G + V ++ TCY G GC CPAC LR++G E+ ++ +
Sbjct: 171 ADELGAFEFVR---TKTLTCYNGI------IADGCGECPACVLRRRGLEEYMKEKE 217
>gi|114569268|ref|YP_755948.1| exsB protein [Maricaulis maris MCS10]
gi|122316597|sp|Q0ARS7|QUEC_MARMM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114339730|gb|ABI65010.1| preQ(0) biosynthesis protein QueC [Maricaulis maris MCS10]
Length = 243
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 125/231 (54%), Positives = 162/231 (70%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL+LFSGGQDS+TCL+WAL R+ RVET+ FDYGQR+ VE+ R VR + P W
Sbjct: 11 NRTALVLFSGGQDSATCLAWALQRYARVETVGFDYGQRHHVEMTARERVRSGLAASFPHW 70
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D LGED ++ LA G I+ S+LT + A+++Q N LP+TFVPGRN++FL A+ LAYR G
Sbjct: 71 GDRLGEDFVIDLAGYGAIADSALTADRAIEMQANGLPSTFVPGRNLVFLTVASALAYRRG 130
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G+CETD+SGYPDCR +TI A++TA+ LG+E V + TPLM L K TW LA +
Sbjct: 131 HGVLVGGMCETDFSGYPDCRRNTIDAMQTALGLGLEMAVEIATPLMHLDKAATWALAHQL 190
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
GG L+ LI E+SHTCY G+R KR+ WGYGC CPAC LR G ++
Sbjct: 191 GGDALIGLIEEDSHTCYRGERGKRHAWGYGCGDCPACELRANGHAAWQNSV 241
>gi|187476833|ref|YP_784857.1| hypothetical protein BAV0319 [Bordetella avium 197N]
gi|110816213|sp|Q2KZT1|QUEC_BORA1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|115421419|emb|CAJ47924.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 244
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 126/234 (53%), Positives = 175/234 (74%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ AL+LFSGGQDS+TCL+WALDR+ VET++FDYGQR+++EL+ RL V ++I
Sbjct: 8 MQNHQRRALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHRIELDARLNVLREIRGR 67
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W LG+DH+L L +LG + +++T + A+++Q N LPNTFVPGRN++FL AA L
Sbjct: 68 FPAWAARLGQDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALG 127
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V G+CETD+SGYPDCR DT++A + A++LG+ S VT+ TPLMWL K +TW L
Sbjct: 128 YRRQLDVLVGGMCETDFSGYPDCRDDTMKAQQVALSLGLGSRVTIETPLMWLDKADTWAL 187
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A +GG+ LV I+EESHTCY+G+R +R++WGYGC CPAC LR+ GW + E+
Sbjct: 188 ADSLGGESLVQTIVEESHTCYVGERGQRHDWGYGCGECPACVLRKAGWSRWAER 241
>gi|314933023|ref|ZP_07840389.1| ExsB protein [Staphylococcus caprae C87]
gi|313654342|gb|EFS18098.1| ExsB protein [Staphylococcus caprae C87]
Length = 223
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 142/238 (59%), Gaps = 20/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E +
Sbjct: 1 MTKSTLDKDKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVARKIA--- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + HIL +++L ++ ++LT+ ++ ++ ++ +PNTFVP RN++FL FA
Sbjct: 58 -------NEQNLKHHILDMSLLSQLTPNALTQHDLEIEENEDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQVNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TW+L+ ++G +++ I + TCY G G GC CPAC LR +G + E
Sbjct: 171 TWELSDELG---VLDYIRHHTLTCYNGI------IGDGCGECPACKLRARGLHHYLES 219
>gi|302332422|gb|ADL22615.1| queuosine biosynthesis protein QueC [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 222
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + +
Sbjct: 1 MESVLN-NEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEIAKQIAQ-- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
D + H+L +++L ++ ++LT+ ++ + ++ +PNTFVP RN++FL FA
Sbjct: 58 --------DQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARNLLFLSFA 109
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++G +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K E
Sbjct: 110 GALAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAE 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TWKL+ ++ ++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 170 TWKLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLES 218
>gi|296115260|ref|ZP_06833900.1| exsB protein [Gluconacetobacter hansenii ATCC 23769]
gi|295978163|gb|EFG84901.1| exsB protein [Gluconacetobacter hansenii ATCC 23769]
Length = 248
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 132/231 (57%), Positives = 164/231 (70%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
SAL++FSGGQDS+TCL+WAL RF VETL FDYGQR+ VEL CR +R + L P W
Sbjct: 14 DSALVVFSGGQDSATCLAWALSRFAHVETLGFDYGQRHSVELSCRAALRDGMARLDPAWA 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG DH L L LG +S ++LT+ + + +N LP TFVPGRNIIFL FAA LA R
Sbjct: 74 ARLGPDHTLSLDALGAVSDTALTREAEITLGENGLPTTFVPGRNIIFLTFAAALAARRNA 133
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETDYSGYPDCR DTI+A++ +NLGM S + +HTPLMW+ K +TW +AQ++G
Sbjct: 134 RHIVTGVCETDYSGYPDCRDDTIKALQVTLNLGMASRLVLHTPLMWIDKAQTWLMAQELG 193
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G LV LI ESH+CYLG R + WG+GC +CPAC LR+ GW F+ Q
Sbjct: 194 GDALVGLINRESHSCYLGTRGVMHPWGHGCGTCPACQLRRAGWERFRAMTQ 244
>gi|209885226|ref|YP_002289083.1| ExsB protein [Oligotropha carboxidovorans OM5]
gi|209873422|gb|ACI93218.1| ExsB protein [Oligotropha carboxidovorans OM5]
Length = 239
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 130/238 (54%), Positives = 173/238 (72%), Gaps = 2/238 (0%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
MN+ + K +AL+LFSGGQDS+TCL+W L RF RVET+ FDYGQR+ +ELECR + +
Sbjct: 1 MNNPLDKPLDDAALVLFSGGQDSATCLAWVLSRFARVETVGFDYGQRHAIELECRSTLIE 60
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ + P+WK LGE H L + L +IS ++LT+++A+++ LPNTFVPGRN++FL
Sbjct: 61 RFKAIKPEWKARLGEAHTLAIPTLAEISDTALTRDIAIEMDKGGLPNTFVPGRNLLFLTL 120
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA L YR GI +IV G+CETDYSGYPDCR +TI+++ AIN GM +HTPLMW K
Sbjct: 121 AAALGYRRGIRHIVGGMCETDYSGYPDCRDETIKSLNVAINQGMGRDFELHTPLMWRDKG 180
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
ETW LA ++GG LV+LI++ SHTCYLG+R ++WGYGC CPAC LR GW ++K
Sbjct: 181 ETWALAHELGGDALVDLIVQHSHTCYLGERGALHDWGYGCGECPACRLRAAGWAKYKT 238
>gi|303327392|ref|ZP_07357833.1| ExsB protein [Desulfovibrio sp. 3_1_syn3]
gi|302862332|gb|EFL85265.1| ExsB protein [Desulfovibrio sp. 3_1_syn3]
Length = 252
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 119/241 (49%), Positives = 166/241 (68%), Gaps = 1/241 (0%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ + AL++FSGGQDS+TCL+W L RF+RV TL FDYGQR+ VEL CR +R +
Sbjct: 4 VSPTPLQQEQALVIFSGGQDSATCLAWTLSRFERVRTLGFDYGQRHNVELACRQRLRAAL 63
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFA 119
EL P W LG D +L + I ++ ++LT + LP TFVPGRN++F++ A
Sbjct: 64 AELDPLWASRLGPDTLLNVDIFRQLADTALTSEAPIAADGPGGLPTTFVPGRNLLFILHA 123
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A AY I ++++GVC++D SGYPDCR D+I+A++ A+N GM+S +HTPLMWL K
Sbjct: 124 AVWAYAKNIRHLILGVCQSDSSGYPDCRDDSIKAMQVALNCGMDSRFVLHTPLMWLSKRG 183
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
W+LA+ +GG LV+LILEESHTCY G+R +RY+WGYGC CPAC LR G+ ++E +
Sbjct: 184 AWELAESLGGTALVDLILEESHTCYAGERGRRYDWGYGCGVCPACRLRASGYAAYREARK 243
Query: 240 D 240
+
Sbjct: 244 N 244
>gi|82750414|ref|YP_416155.1| aluminum resistance protein [Staphylococcus aureus RF122]
gi|110816265|sp|Q2YSL9|QUEC_STAAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|82655945|emb|CAI80349.1| probable aluminum resistance protein [Staphylococcus aureus RF122]
Length = 222
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + +
Sbjct: 1 MESVLN-NEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKQIAQ-- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
D + H+L +++L ++ ++LT+ ++ + ++ +PNTFVP RN++FL FA
Sbjct: 58 --------DQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARNLLFLSFA 109
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++G +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K E
Sbjct: 110 GALAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDCVIHTPLMWLNKAE 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TWKL+ ++ ++++ I ++ TCY G G GC CPAC+LRQ+G ++ E
Sbjct: 170 TWKLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLES 218
>gi|223043070|ref|ZP_03613118.1| ExsB protein [Staphylococcus capitis SK14]
gi|222443924|gb|EEE50021.1| ExsB protein [Staphylococcus capitis SK14]
Length = 223
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 90/238 (37%), Positives = 142/238 (59%), Gaps = 20/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E +
Sbjct: 1 MTKSTLDKDKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKKIA--- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + HIL +++L ++ ++LT+ ++ ++ D+ +PNTFVP RN++FL FA
Sbjct: 58 -------NEQNLKHHILDMSLLSQLTPNALTQHDLEIEENDDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY+L +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQLNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TW+L+ ++G +++ + + TCY G G GC CPAC LR +G + E
Sbjct: 171 TWELSDELG---VLDYVRHNTLTCYNGV------IGDGCGECPACKLRARGLHHYLES 219
>gi|89097394|ref|ZP_01170283.1| aluminum resistance protein [Bacillus sp. NRRL B-14911]
gi|89087690|gb|EAR66802.1| aluminum resistance protein [Bacillus sp. NRRL B-14911]
Length = 218
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 146/234 (62%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA F VE ++FDYGQR+ ELEC + +
Sbjct: 2 KNEKAIVVFSGGQDSTTCLFWAKKNFKEVEAVTFDYGQRHIAELECARRIAADLA----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ H+L +++L ++ ++LT K++ ++ ++ LP+TFVPGRN++FL FA LA +
Sbjct: 57 -----IQHHVLDMSLLNQLAPNALTRKDIKVEEKEGELPSTFVPGRNLLFLSFAGVLASQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ +I+ GVCETD+SGYPDCR ++++ +NL M+S +HTPLMWL K ETWKLA
Sbjct: 112 VAAKHIITGVCETDFSGYPDCRDQFVKSLNVTLNLSMDSQFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + + +++ TCY G GC CPAC LR++G ++ + Q
Sbjct: 172 ELGA---LEYVRKQTLTCYEGV------IADGCGECPACRLRKRGLEDYLAERQ 216
>gi|27467405|ref|NP_764042.1| hypothetical protein SE0487 [Staphylococcus epidermidis ATCC 12228]
gi|57866294|ref|YP_187969.1| exsB protein [Staphylococcus epidermidis RP62A]
gi|251810142|ref|ZP_04824615.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875712|ref|ZP_06284583.1| protein ExsB [Staphylococcus epidermidis SK135]
gi|293368168|ref|ZP_06614798.1| transcription regulator ExsB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|81675233|sp|Q5HR20|QUEC_STAEQ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81844015|sp|Q8CTH8|QUEC_STAES RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|27314948|gb|AAO04084.1|AE016745_183 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57636952|gb|AAW53740.1| exsB protein [Staphylococcus epidermidis RP62A]
gi|251806334|gb|EES58991.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295739|gb|EFA88262.1| protein ExsB [Staphylococcus epidermidis SK135]
gi|291317702|gb|EFE58118.1| transcription regulator ExsB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329735600|gb|EGG71884.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
VCU045]
gi|329736844|gb|EGG73109.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
VCU028]
Length = 223
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 143/237 (60%), Gaps = 20/237 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + K
Sbjct: 1 MSQNDLNKEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDKEIEVAKKIAK-- 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + HIL +++L ++ ++LT+ ++++ D+ +PNTFVP RN++FL FA
Sbjct: 59 --------EQNLKHHILDMSLLSQLTPNALTQHELSIEDNDDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQIHAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
TW L+ +G +++ I + TCY G G GC CPAC+LR +G + E
Sbjct: 171 TWALSDKLG---VLDYIRHNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 218
>gi|239636675|ref|ZP_04677677.1| ExsB protein [Staphylococcus warneri L37603]
gi|239598030|gb|EEQ80525.1| ExsB protein [Staphylococcus warneri L37603]
Length = 223
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 144/238 (60%), Gaps = 20/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M A+++FSGGQDS+TCL +A F V ++F+YGQR+ E+E + +
Sbjct: 1 MVQHTLDQNKAIVVFSGGQDSTTCLFYAKKHFKDVTLVTFNYGQRHDTEIEVAKKIAQ-- 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ E HIL +++L ++ ++LT+ ++ ++ ++ +PNTFVP RN++FL FA
Sbjct: 59 --------EQNVEHHILDMSLLSQLTPNALTQHDLKIEDTEDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +
Sbjct: 111 GALAYQIKAKHIITGVCETDFSGYPDCRDSFIKSMNVTLNLSMDRDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TW+LA D+G ++N I E + TCY G G GC CPAC LR +G ++ K
Sbjct: 171 TWELADDLG---VLNYIRENTLTCYNGI------IGDGCGECPACQLRSRGLEKYLAK 219
>gi|188580425|ref|YP_001923870.1| exsB protein [Methylobacterium populi BJ001]
gi|179343923|gb|ACB79335.1| exsB protein [Methylobacterium populi BJ001]
Length = 239
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 137/229 (59%), Positives = 177/229 (77%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+LFSGGQDS+TCL+WALDRF VETL FDYGQR++VEL+ R +R+ + L P W+ L
Sbjct: 11 LVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHRVELDRREALRRGVTALDPGWRRRL 70
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
GEDH L LA LG IS ++LT++ A+ + LPNTFVPGRN+ FL FAA LAYR G+ +I
Sbjct: 71 GEDHTLSLAALGAISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRHI 130
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G+CETD+SGYPDCR DTI+A++ A+NLGME +HTPLMW+ K +TW LA+ +GG+
Sbjct: 131 VGGMCETDFSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAEALGGRP 190
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LV+LI+EESHTCYLG+R +R++WGYGC +CPAC LR KG+ + D
Sbjct: 191 LVDLIVEESHTCYLGERGERHDWGYGCGTCPACDLRAKGFARYLAARAD 239
>gi|261419197|ref|YP_003252879.1| exsB protein [Geobacillus sp. Y412MC61]
gi|261375654|gb|ACX78397.1| exsB protein [Geobacillus sp. Y412MC61]
Length = 224
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 146/238 (61%), Gaps = 21/238 (8%)
Query: 4 IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++K A+++FSGGQDS+TCL WA ++F VE ++FDYGQR++ E++ + ++
Sbjct: 1 MMKMNEEKAVVVFSGGQDSTTCLFWAKEQFGEVEAVTFDYGQRHRREIDVAQAIADELG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L L++LG ++ ++LT+ ++A++ ++ LP TFV GRN++FL FAA
Sbjct: 60 ---------VRHTVLDLSLLGQLAPNALTRRDIAIEQKEGELPTTFVDGRNLLFLSFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW
Sbjct: 111 FAKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
KLA ++G + I ++ TCY G GC CPAC LR++G E+ +
Sbjct: 171 KLADELGA---LEFIRTKTLTCYNGI------IADGCGECPACVLRKRGLDEYLREKA 219
>gi|239826405|ref|YP_002949029.1| exsB protein [Geobacillus sp. WCH70]
gi|259551536|sp|C5D7Y2|QUEC_GEOSW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|239806698|gb|ACS23763.1| exsB protein [Geobacillus sp. WCH70]
Length = 221
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 149/234 (63%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +FD VE ++FDYGQR+++E+E + K++
Sbjct: 2 KKEKAIVVFSGGQDSTTCLFWALKQFDEVEAVTFDYGQRHRLEIEVAASIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L +++L ++ ++LT+ ++A++ + LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----VPHTVLDMSLLNQLAPNALTRSDIAIEQNEGQLPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TWKLA
Sbjct: 112 KGARHLVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYQFVIHTPLMWLTKAKTWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G D V ++ TCY G GC CPAC LR++G E+ ++ +
Sbjct: 172 ELGAFDFVR---TKTLTCYNGI------IADGCGECPACVLRRRGLEEYMKEKE 216
>gi|330684948|gb|EGG96627.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
VCU121]
Length = 223
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 144/238 (60%), Gaps = 20/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M A+++FSGGQDS+TCL +A F V ++F+YGQR+ E+E + +
Sbjct: 1 MVQHTLDQNKAIVVFSGGQDSTTCLFYAKKHFKDVILITFNYGQRHDAEIEVAKKIAQ-- 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ E HIL +++L ++ ++LT+ ++ ++ ++ +PNTFVP RN++FL FA
Sbjct: 59 --------EQNVEHHILDMSLLSQLTPNALTQHDLKIEDTEDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +
Sbjct: 111 GALAYQIKAKHIITGVCETDFSGYPDCRDSFIKSMNVTLNLSMDRDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TW+LA ++G ++N I E + TCY G G GC CPAC LR +G ++ K
Sbjct: 171 TWELADNLG---VLNYIRENTLTCYNGI------IGDGCGECPACQLRSRGLDQYLAK 219
>gi|319401215|gb|EFV89430.1| queuosine biosynthesis protein queC [Staphylococcus epidermidis
FRI909]
Length = 223
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 143/237 (60%), Gaps = 20/237 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + K
Sbjct: 1 MSQNDLNKEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKKIAK-- 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + HIL +++L ++ ++LT+ + ++ D+ +PNTFVP RN++FL FA
Sbjct: 59 --------EQNLKHHILDMSLLSQLTPNALTQHELQIEDNDDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR + I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQIHAKHIITGVCETDFSGYPDCRDNFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
TW L+ +G +++ I + TCY G G GC CPAC+LR +G + E
Sbjct: 171 TWALSDKLG---VLDYIRHNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 218
>gi|297530834|ref|YP_003672109.1| exsB protein [Geobacillus sp. C56-T3]
gi|297254086|gb|ADI27532.1| exsB protein [Geobacillus sp. C56-T3]
Length = 223
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 95/232 (40%), Positives = 143/232 (61%), Gaps = 21/232 (9%)
Query: 5 IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E++ + ++
Sbjct: 1 MKMNEEKAVVVFSGGQDSTTCLFWAKKQFGEVEAVTFDYGQRHRREIDVAQAIADELG-- 58
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+L L++LG ++ ++LT+ ++A++ ++ LP TFV GRN++FL FAA
Sbjct: 59 --------VRHTVLDLSLLGQLAPNALTRRDIAIEQKEGELPTTFVDGRNLLFLSFAAVF 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWK
Sbjct: 111 AKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETWK 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LA ++G + I ++ TCY G GC CPAC LR++G E+
Sbjct: 171 LADELGA---LEFIRTKTLTCYNGI------IADGCGECPACVLRKRGLDEY 213
>gi|33591458|ref|NP_879102.1| hypothetical protein BP0214 [Bordetella pertussis Tohama I]
gi|33571100|emb|CAE40594.1| Conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332380859|gb|AEE65706.1| hypothetical protein BPTD_0212 [Bordetella pertussis CS]
Length = 239
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 121/231 (52%), Positives = 169/231 (73%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ AL+LFSGGQDS+TCL+WAL+R+ VETL FDYGQR++VEL+ R V +++
Sbjct: 1 MQNHQRRALVLFSGGQDSTTCLAWALERYAHVETLGFDYGQRHRVELDARQVVLRELRAN 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W LG+DH+L L IL + +++T + +++Q N LPNTFVPGRN++FL AA L
Sbjct: 61 FPDWAQRLGDDHLLDLGILAQVGDTAMTSDREIEMQANGLPNTFVPGRNLLFLTLAAALG 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V G+CETD+SGYPDCR DTI++ + + LG+ + VT+ TPLMWL K +TW+L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKSQQVTLGLGLGTRVTIETPLMWLDKAQTWEL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A +GGQ LV++++E SHTCYLG+R +R++WGYGC CPAC LR+ GW +
Sbjct: 181 ADRLGGQALVDMVIEHSHTCYLGERGQRHDWGYGCGHCPACALRKNGWERW 231
>gi|33595128|ref|NP_882771.1| hypothetical protein BPP0419 [Bordetella parapertussis 12822]
gi|81429782|sp|Q7WCA8|QUEC_BORPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33565205|emb|CAE36003.1| Conserved hypothetical protein [Bordetella parapertussis]
Length = 244
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 123/239 (51%), Positives = 171/239 (71%), Gaps = 2/239 (0%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ AL+LFSGGQDS+TCL+WAL+R+ VETL FDYGQR++VEL+ R V +++
Sbjct: 6 MQNHQRRALVLFSGGQDSTTCLAWALERYAHVETLGFDYGQRHRVELDARQVVLRELRAN 65
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W LG+DH+L L IL + +++T + +++Q N LPNTFVPGRN++FL AA L
Sbjct: 66 FPDWAQRLGDDHLLDLGILAQVGDTAMTSDREIEMQANGLPNTFVPGRNLLFLTLAAALG 125
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V G+CETD+SGYPDCR DTI++ + + LG+ + VT+ TPLMWL K +TW+L
Sbjct: 126 YRRQLDVLVGGMCETDFSGYPDCRDDTIKSQQVTLGLGLGTRVTIETPLMWLDKAQTWEL 185
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF--KEKYQD 240
A +GGQ LV++++E SHTCYLG+R +R++WGYGC CPAC LR+ GW + Y D
Sbjct: 186 ADRLGGQALVDMVIEHSHTCYLGERGQRHDWGYGCGHCPACALRKNGWERWVAGAAYAD 244
>gi|242242079|ref|ZP_04796524.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis W23144]
gi|242234464|gb|EES36776.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis W23144]
Length = 223
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 142/237 (59%), Gaps = 20/237 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + K
Sbjct: 1 MSQNDLNKEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKKIAK-- 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + HIL +++L ++ ++LT+ + ++ D+ +PNTFVP RN++FL FA
Sbjct: 59 --------EQNLKHHILDMSLLSQLTPNALTQHELKIEDNDDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR I+++ ++L M+ +HTPLMWL K +
Sbjct: 111 GALAYQIHAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
TW L+ +G +++ I + TCY G G GC CPAC+LR +G + E
Sbjct: 171 TWALSDKLG---VLDYIRHNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 218
>gi|154253587|ref|YP_001414411.1| exsB protein [Parvibaculum lavamentivorans DS-1]
gi|189038931|sp|A7HXX1|QUEC_PARL1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|154157537|gb|ABS64754.1| exsB protein [Parvibaculum lavamentivorans DS-1]
Length = 236
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 122/233 (52%), Positives = 162/233 (69%), Gaps = 1/233 (0%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ AL+LFSGGQDS+ CL+ L R+D VET+ FDYGQ + VEL CR +R +
Sbjct: 2 ATTEKTKALVLFSGGQDSTVCLASVLARYDEVETVGFDYGQAHAVELGCRAKLRDALTRF 61
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W LG DH++ L LG IS ++LT++V +++ +N LP TFVPGRN++F +AA L
Sbjct: 62 -PGWGAKLGPDHMIALPELGRISETALTRDVEIEMGENGLPTTFVPGRNLLFFTYAAALG 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR G + IV G+CETDYSGYPDCR DTI A+E AI LGM+ T+ TPLM + K TW L
Sbjct: 121 YRRGASVIVGGMCETDYSGYPDCRADTIAALERAICLGMDRAFTLETPLMRIDKAATWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A ++GG LV+LI+EE+H+CY G R KR++WGYGC +CPAC LR +G+ +
Sbjct: 181 AHELGGDALVDLIIEETHSCYRGDRSKRHDWGYGCGTCPACELRARGYTAYLA 233
>gi|94987242|ref|YP_595175.1| hypothetical protein LI0800 [Lawsonia intracellularis PHE/MN1-00]
gi|118574286|sp|Q1MQ73|QUEC_LAWIP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|94731491|emb|CAJ54854.1| Conserved hypothetical protein [Lawsonia intracellularis
PHE/MN1-00]
Length = 238
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 115/232 (49%), Positives = 155/232 (66%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
ALLLFSGGQDS TCL WAL F + T+ F YGQR+ VE++CR +R KI +L W
Sbjct: 5 NQKALLLFSGGQDSGTCLGWALSNFSHIITIGFSYGQRHSVEMQCRTNIRNKISKLSKIW 64
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LGED+I L I + +++T + + LPNTFVPGRNI FL AA A+R
Sbjct: 65 EQRLGEDYIFSLDIFSQLGETAITSELEIVFDKQGLPNTFVPGRNIFFLTIAAAFAWRNS 124
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +++IG CETD+SGYPDC+ ++I+A + A++LG+ +T+HTPLMWL K +TW+LA +
Sbjct: 125 IRHLIIGTCETDFSGYPDCQDNSIKATQLALSLGLGEDITIHTPLMWLTKAQTWELALHL 184
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
GG V+LI E+H+CYL +EWGYGC +CPAC LR+ GW F K +
Sbjct: 185 GGSKFVDLIRNETHSCYLNDHTTSHEWGYGCGTCPACKLRKNGWETFLMKKR 236
>gi|33599410|ref|NP_886970.1| hypothetical protein BB0421 [Bordetella bronchiseptica RB50]
gi|81432318|sp|Q7WQB2|QUEC_BORBR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816214|sp|Q7W0D1|QUEC_BORPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33567006|emb|CAE30919.1| Conserved hypothetical protein [Bordetella bronchiseptica RB50]
Length = 244
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 121/231 (52%), Positives = 169/231 (73%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ AL+LFSGGQDS+TCL+WAL+R+ VETL FDYGQR++VEL+ R V +++
Sbjct: 6 MQNHQRRALVLFSGGQDSTTCLAWALERYAHVETLGFDYGQRHRVELDARQVVLRELRAN 65
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W LG+DH+L L IL + +++T + +++Q N LPNTFVPGRN++FL AA L
Sbjct: 66 FPDWAQRLGDDHLLDLGILAQVGDTAMTSDREIEMQANGLPNTFVPGRNLLFLTLAAALG 125
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V G+CETD+SGYPDCR DTI++ + + LG+ + VT+ TPLMWL K +TW+L
Sbjct: 126 YRRQLDVLVGGMCETDFSGYPDCRDDTIKSQQVTLGLGLGTRVTIETPLMWLDKAQTWEL 185
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A +GGQ LV++++E SHTCYLG+R +R++WGYGC CPAC LR+ GW +
Sbjct: 186 ADRLGGQALVDMVIEHSHTCYLGERGQRHDWGYGCGHCPACALRKNGWERW 236
>gi|237807722|ref|YP_002892162.1| exsB protein [Tolumonas auensis DSM 9187]
gi|237499983|gb|ACQ92576.1| exsB protein [Tolumonas auensis DSM 9187]
Length = 232
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 147/236 (62%), Gaps = 21/236 (8%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+++FSGGQDS+TCL +A+ ++D V ++FDYGQR+ E+E + +
Sbjct: 1 MSQTKRKAVVVFSGGQDSTTCLLYAVQQYDEVHAITFDYGQRHVQEIEVARQIAADL--- 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L +L + +L +++ S+LT++ V+ +Q+N LPNTFVPGRNI+FL AA
Sbjct: 58 ------GLAAHKVLDVGLLNELAVSALTRDAIPVSNDLQENGLPNTFVPGRNILFLTLAA 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
AY++G ++ GVCETD+SGYPDCR + ++A+ A+ LGME V TPLMWL K ET
Sbjct: 112 IYAYQVGADTVITGVCETDFSGYPDCRDEFVKALNHAVKLGMERDVKFETPLMWLNKAET 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
W LA IG ++ + +++ TCY G G GC CPAC LR KG ++++
Sbjct: 172 WALADKIG---RLDYVRQQTLTCYNGV------IGDGCGECPACKLRAKGLHDYQQ 218
>gi|319766013|ref|YP_004131514.1| exsB protein [Geobacillus sp. Y412MC52]
gi|317110879|gb|ADU93371.1| exsB protein [Geobacillus sp. Y412MC52]
Length = 223
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 145/237 (61%), Gaps = 21/237 (8%)
Query: 5 IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K A+++FSGGQDS+TCL WA ++F VE ++FDYGQR++ E++ + ++
Sbjct: 1 MKMNEEKAVVVFSGGQDSTTCLFWAKEQFGEVEAVTFDYGQRHRREIDVAQAIADELG-- 58
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+L L++LG ++ ++LT+ ++A++ ++ LP TFV GRN++FL FAA
Sbjct: 59 --------VRHTVLDLSLLGQLAPNALTRRDIAIEQKEGELPTTFVDGRNLLFLSFAAVF 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWK
Sbjct: 111 AKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETWK 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA ++G + I ++ TCY G GC CPAC LR++G E+ +
Sbjct: 171 LADELGA---LEFIRTKTLTCYNGI------IADGCGECPACVLRKRGLDEYLREKA 218
>gi|262404008|ref|ZP_06080563.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC586]
gi|262349040|gb|EEY98178.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC586]
Length = 231
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 147/233 (63%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEIAQKLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVNLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++++ A+ GM+ + + TPLMWL K +TW LA
Sbjct: 113 IGADTVITGVCETDFSGYPDCRNDFVQSMNQALAKGMDMSLNIRTPLMWLNKAQTWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G + L+ +++ TCY G G GC CPAC+LRQ G E+ E
Sbjct: 173 QLGA---LELVRKQTLTCYNG------LIGDGCGECPACHLRQAGLNEYLENR 216
>gi|311109100|ref|YP_003981953.1| queuosine biosynthesis protein QueC [Achromobacter xylosoxidans A8]
gi|310763789|gb|ADP19238.1| queuosine biosynthesis protein QueC [Achromobacter xylosoxidans A8]
Length = 239
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 127/231 (54%), Positives = 168/231 (72%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ AL+LFSGGQDS+TCL+WAL+R+ VET++FDYGQR+ +EL RL V + I
Sbjct: 1 MQNHQRRALVLFSGGQDSTTCLAWALERYAHVETVAFDYGQRHHIELSARLNVLRDIRNN 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W LGEDH+L L +LG + +++T + A+++Q N LPNTFVPGRN++FL AA L
Sbjct: 61 FPDWAPRLGEDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALG 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V G+CETD+SGYPDCR DTI+A + A+ LG+ S VT+ TPLMW+ K ETW L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGSRVTIETPLMWIDKSETWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A +GG LV I+EESHTCYLG+R R++WGYGC CPAC LR+ GW ++
Sbjct: 181 AHQLGGDALVETIVEESHTCYLGERGARHDWGYGCGECPACKLRKIGWEKW 231
>gi|153833106|ref|ZP_01985773.1| ExsB protein [Vibrio harveyi HY01]
gi|156974666|ref|YP_001445573.1| queuosine biosynthesis protein QueC [Vibrio harveyi ATCC BAA-1116]
gi|167016455|sp|A7MW43|QUEC_VIBHB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148870674|gb|EDL69581.1| ExsB protein [Vibrio harveyi HY01]
gi|156526260|gb|ABU71346.1| hypothetical protein VIBHAR_02384 [Vibrio harveyi ATCC BAA-1116]
Length = 232
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 142/232 (61%), Gaps = 21/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V K +
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAEKVAKDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVAAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR D ++A+ +A+ GM+ + TPLMWL K ETW LA
Sbjct: 113 IGAETVITGVCETDFSGYPDCRDDFVKAMNSALVKGMDRQFEIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D + L+ E + TCY G G GC CP+C LR+ G ++
Sbjct: 173 QY---DALQLVRESTLTCYNGI------IGDGCGDCPSCDLRKAGLDDYLNN 215
>gi|138894533|ref|YP_001124986.1| aluminum resistance protein [Geobacillus thermodenitrificans
NG80-2]
gi|134266046|gb|ABO66241.1| Aluminum resistance protein [Geobacillus thermodenitrificans
NG80-2]
Length = 223
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 145/237 (61%), Gaps = 21/237 (8%)
Query: 5 IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E+E + ++
Sbjct: 1 MKMNEEKAVVVFSGGQDSTTCLFWAKKQFAEVEAVTFDYGQRHRREIEVAASIADELG-- 58
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+L +++LG ++ ++LT+ +A++ ++ LP TFV GRN++FL FAA L
Sbjct: 59 --------VRHTVLDMSLLGQLAPNALTRGEIAIEQKEGELPTTFVDGRNLLFLSFAAVL 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWK
Sbjct: 111 AKQRGARHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYPFVIHTPLMWLTKAETWK 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA ++G + V ++ TCY G GC CPAC LR++G E+ ++
Sbjct: 171 LADELGALEFVR---TKTLTCYNGV------IADGCGECPACVLRKRGLEEYLQEKA 218
>gi|56419510|ref|YP_146828.1| aluminum resistance protein [Geobacillus kaustophilus HTA426]
gi|56379352|dbj|BAD75260.1| aluminum resistance protein [Geobacillus kaustophilus HTA426]
Length = 224
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 95/239 (39%), Positives = 145/239 (60%), Gaps = 21/239 (8%)
Query: 4 IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++K A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E++ + ++
Sbjct: 1 MMKMNEEKAVVVFSGGQDSTTCLFWAKKQFGEVEAVTFDYGQRHRREIDVAQAIADELG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L L++LG ++ ++LT+ ++A++ + LP TFV GRN++FL FAA
Sbjct: 60 ---------VRHTVLDLSLLGQLAPNALTRRDIAIEQKKGELPTTFVDGRNLLFLSFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW
Sbjct: 111 FAKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
KLA ++G + I ++ TCY G GC CPAC LR++G E+ + +
Sbjct: 171 KLADELGA---LEFIRTKTLTCYNGI------IADGCGECPACALRKRGLDEYLREKAE 220
>gi|119774961|ref|YP_927701.1| ExsB protein [Shewanella amazonensis SB2B]
gi|167016452|sp|A1S6M5|QUEC_SHEAM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119767461|gb|ABM00032.1| ExsB protein [Shewanella amazonensis SB2B]
Length = 230
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 103/232 (44%), Positives = 148/232 (63%), Gaps = 21/232 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL +FD V ++FDYGQR+ E+E + ++
Sbjct: 3 KAVVVFSGGQDSTTCLVQALSQFDEVHAITFDYGQRHSEEIEVAKALTSEL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ +++LG+++ S+LT++ V+ ++ DN LPNTFVPGRNI+FL A AY+L
Sbjct: 54 GCASHKIMDVSLLGELAISALTRDAIPVSHELMDNGLPNTFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR+D I+A+E A+NLGM+ + +HTPLMWL K ETW LA
Sbjct: 114 GADTVITGVCETDFSGYPDCRNDFIKAMEQALNLGMDKQLNIHTPLMWLNKAETWALADR 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
G + L+ + TCY G R G GC CPAC+LR++G ++
Sbjct: 174 YG---KLELVRNHTLTCYNGIR------GDGCGDCPACHLRKRGLEDYLSNR 216
>gi|254228267|ref|ZP_04921696.1| ExsB protein [Vibrio sp. Ex25]
gi|262394170|ref|YP_003286024.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. Ex25]
gi|151939340|gb|EDN58169.1| ExsB protein [Vibrio sp. Ex25]
gi|262337764|gb|ACY51559.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. Ex25]
Length = 231
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 146/234 (62%), Gaps = 21/234 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K +
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQNIAKDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR D ++A+ TA+ GM+ ++T+ TPLMWL K ETW LA
Sbjct: 113 IGAETVITGVCETDFSGYPDCRDDFVKAMNTALVKGMDRNLTIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D + L+ E + TCY G G GC CP+C LR+ G ++ +
Sbjct: 173 QY---DALQLVRENTLTCYNGV------IGDGCGDCPSCDLRKAGLDDYLNNKE 217
>gi|28898412|ref|NP_798017.1| queuosine biosynthesis protein QueC [Vibrio parahaemolyticus RIMD
2210633]
gi|260365145|ref|ZP_05777716.1| protein ExsB [Vibrio parahaemolyticus K5030]
gi|260876574|ref|ZP_05888929.1| protein ExsB [Vibrio parahaemolyticus AN-5034]
gi|260895067|ref|ZP_05903563.1| protein ExsB [Vibrio parahaemolyticus Peru-466]
gi|260900923|ref|ZP_05909318.1| protein ExsB [Vibrio parahaemolyticus AQ4037]
gi|81727639|sp|Q87P80|QUEC_VIBPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|28806629|dbj|BAC59901.1| exsB protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308086022|gb|EFO35717.1| protein ExsB [Vibrio parahaemolyticus Peru-466]
gi|308093579|gb|EFO43274.1| protein ExsB [Vibrio parahaemolyticus AN-5034]
gi|308110776|gb|EFO48316.1| protein ExsB [Vibrio parahaemolyticus AQ4037]
gi|308111509|gb|EFO49049.1| protein ExsB [Vibrio parahaemolyticus K5030]
Length = 232
Score = 290 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 144/232 (62%), Gaps = 21/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K +
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKIAKDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR D ++++ TA+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 113 IGADTVITGVCETDFSGYPDCRDDFVKSMNTALVKGMDRALTIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + L+ E + TCY G G GC CP+C LR+ G E+
Sbjct: 173 QY---NALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDEYLNN 215
>gi|293602126|ref|ZP_06684578.1| transcription regulator ExsB [Achromobacter piechaudii ATCC 43553]
gi|292819462|gb|EFF78491.1| transcription regulator ExsB [Achromobacter piechaudii ATCC 43553]
Length = 239
Score = 290 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 128/231 (55%), Positives = 168/231 (72%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ AL+LFSGGQDS+TCL+WALDR+ VET++FDYGQR+ +EL RL V + I
Sbjct: 1 MQNHQRRALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHHIELSARLNVLRDIRAN 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P W LGEDH+L L +LG + +++T + A+++Q N LPNTFVPGRN++FL AA L
Sbjct: 61 FPDWAPRLGEDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALG 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
YR + +V G+CETD+SGYPDCR DTI+A + A+ LG+ S VT+ TPLMW+ K ETW L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGSRVTIETPLMWIDKSETWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
A +GG LV I+EESHTCYLG+R R++WGYGC CPAC LR+ GW ++
Sbjct: 181 AYQLGGDALVETIVEESHTCYLGERGARHDWGYGCGECPACKLRKIGWEKW 231
>gi|189039054|sp|A4ILN7|QUEC_GEOTN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 221
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 97/240 (40%), Positives = 146/240 (60%), Gaps = 25/240 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN+ A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E+E + ++
Sbjct: 1 MNE-----EKAVVVFSGGQDSTTCLFWAKKQFAEVEAVTFDYGQRHRREIEVAASIADEL 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+L +++LG ++ ++LT+ +A++ ++ LP TFV GRN++FL FA
Sbjct: 56 G----------VRHTVLDMSLLGQLAPNALTRGEIAIEQKEGELPTTFVDGRNLLFLSFA 105
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA + G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K E
Sbjct: 106 AVLAKQRGARHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYPFVIHTPLMWLTKAE 165
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKLA ++G + V ++ TCY G GC CPAC LR++G E+ ++
Sbjct: 166 TWKLADELGALEFVR---TKTLTCYNGV------IADGCGECPACVLRKRGLEEYLQEKA 216
>gi|261210909|ref|ZP_05925199.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC341]
gi|260839884|gb|EEX66484.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC341]
Length = 231
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 150/234 (64%), Gaps = 21/234 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 3 KAVVVFSGGQDSTTCLVQALQEFDEVHAITFDYGQRHKLEIEVAQQLAKQL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++
Sbjct: 54 GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR++ ++++ ++ GM+ +T+ TPLMWL K ETW LA
Sbjct: 114 GAKTVITGVCETDFSGYPDCRNEFVQSMNQSLAKGMDMPLTIRTPLMWLNKAETWALADQ 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + L+ +++ TCY G G GC CPAC+LR+ G ++ + D
Sbjct: 174 LGA---LELVRQQTLTCYNG------LIGDGCGECPACHLRKAGLNDYLDNRSD 218
>gi|321315127|ref|YP_004207414.1| pre-queuosine 0 synthase [Bacillus subtilis BSn5]
gi|320021401|gb|ADV96387.1| pre-queuosine 0 synthase [Bacillus subtilis BSn5]
Length = 219
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 149/229 (65%), Gaps = 20/229 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR+ E+E + +K+
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEIEVAKSIAEKLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT+ ++ ++++D LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57 -----VKNHLLDMSLLNQLAPNALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAYQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC+LR KG+ E+
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211
>gi|163850656|ref|YP_001638699.1| exsB protein [Methylobacterium extorquens PA1]
gi|259551542|sp|A9W222|QUEC_METEP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|163662261|gb|ABY29628.1| exsB protein [Methylobacterium extorquens PA1]
Length = 243
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 137/230 (59%), Positives = 176/230 (76%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS+TCL+WALDRF VETL FDYGQR++VEL+ R +R+ + L P W
Sbjct: 14 ALVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHRVELDRRAALRQGLTALDPAWGRR 73
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG DH L LA LG+IS ++LT++ A+ + LPNTFVPGRN+ FL FAA LAYR G+ +
Sbjct: 74 LGPDHTLALAALGEISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRH 133
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
IV G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K +TW LA+ +GG+
Sbjct: 134 IVGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAETLGGR 193
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LV+L++EESHTCYLG+R R+EWGYGC +CPAC LR KG+ + +
Sbjct: 194 ALVDLVVEESHTCYLGERGARHEWGYGCGTCPACDLRAKGFSRYLAARAE 243
>gi|315180244|gb|ADT87158.1| queuosine biosynthesis protein QueC [Vibrio furnissii NCTC 11218]
Length = 229
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 149/234 (63%), Gaps = 21/234 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + KK+
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQTLAKKL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVGLLNELAISSLTRDDIPVSNELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ +A+ LGM+ + + TPLMWL K ETW +A
Sbjct: 113 IGAQTVITGVCETDFSGYPDCRNDFVKAMNSALVLGMDRELEIRTPLMWLNKAETWAMAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G + L+ E+ TCY G G GC CP+C+LR+ G ++ E +
Sbjct: 173 QNGA---LELVRHETLTCYNGI------MGDGCGDCPSCHLRKVGLNDYLEHRE 217
>gi|16078436|ref|NP_389255.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. subtilis str.
168]
gi|221309236|ref|ZP_03591083.1| hypothetical protein Bsubs1_07596 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313564|ref|ZP_03595369.1| hypothetical protein BsubsN3_07537 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318486|ref|ZP_03599780.1| hypothetical protein BsubsJ_07471 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322759|ref|ZP_03604053.1| hypothetical protein BsubsS_07577 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81341924|sp|O31675|QUEC_BACSU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189339604|pdb|3BL5|A Chain A, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339605|pdb|3BL5|B Chain B, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339606|pdb|3BL5|C Chain C, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339607|pdb|3BL5|D Chain D, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339608|pdb|3BL5|E Chain E, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|189339609|pdb|3BL5|F Chain F, Crystal Structure Of Quec From Bacillus Subtilis: An
Enzyme Involved In Preq1 Biosynthesis
gi|2633743|emb|CAB13245.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. subtilis str.
168]
Length = 219
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 149/229 (65%), Gaps = 20/229 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR+ E+E + +K+
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVEVAKSIAEKLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT+ ++ ++++D LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57 -----VKNHLLDMSLLNQLAPNALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAYQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC+LR KG+ E+
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211
>gi|242372945|ref|ZP_04818519.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis M23864:W1]
gi|242349429|gb|EES41030.1| ExsB family post-transcriptional regulator [Staphylococcus
epidermidis M23864:W1]
Length = 223
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 88/238 (36%), Positives = 142/238 (59%), Gaps = 20/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + A+++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E +
Sbjct: 1 MTESDLNKDKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKKIA--- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + HIL +++L ++ ++LT+ ++ ++ ++ +PNTFVP RN++FL FA
Sbjct: 58 -------NEQGLKHHILDMSLLSQLTPNALTQHDLDIEENEDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR I+++ ++L M +HTPLMWL K +
Sbjct: 111 GALAYQINAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMGKDFVIHTPLMWLDKAQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TW+L+ ++G +++ I + TCY G G GC CPAC LR +G + +
Sbjct: 171 TWELSDELG---VLDYIRYNTLTCYNGI------IGDGCGECPACKLRARGLHHYLKS 219
>gi|262165605|ref|ZP_06033342.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus VM223]
gi|262025321|gb|EEY43989.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus VM223]
Length = 231
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 147/233 (63%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVAAHKVMDVGLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 113 IGAATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC+LR+ G ++
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACHLRKAGLNDYLNNR 216
>gi|296329698|ref|ZP_06872183.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674095|ref|YP_003865767.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153196|gb|EFG94060.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305412339|gb|ADM37458.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 219
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 149/229 (65%), Gaps = 20/229 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR+ E+E + +K+
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEIEVAKSIAEKLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT+ ++ ++++D LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57 -----VKNHLLDMSLLNQLAPNALTRNDIDIEVKDGELPSTFVPGRNLVFLSFASILAYQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC+LR KG+ E+
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211
>gi|253576605|ref|ZP_04853933.1| exsB protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844019|gb|EES72039.1| exsB protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 222
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 151/237 (63%), Gaps = 20/237 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA+ +F VE ++FDYGQR+K+E+EC + ++
Sbjct: 1 MLKKEKAVVVFSGGQDSTTCLFWAIQQFGEVEAVTFDYGQRHKLEIECAKSITAELG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L +++LG ++ ++LT+ ++A++ Q+ LP+TFV GRN +FL FAA LA
Sbjct: 58 -------IKHTVLDMSLLGQLTANALTRSDIAIEHQEGELPSTFVDGRNHLFLSFAAVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL
Sbjct: 111 KGVGAKHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIHTPLMWIDKAETWKL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A ++G D V E + TCY G G GC CPAC LR+ G ++ + Q+
Sbjct: 171 ADELGAFDFVR---ERTLTCYNGI------IGDGCGECPACKLRKAGLDKYLLERQE 218
>gi|260772756|ref|ZP_05881672.1| queuosine Biosynthesis QueC ATPase [Vibrio metschnikovii CIP 69.14]
gi|260611895|gb|EEX37098.1| queuosine Biosynthesis QueC ATPase [Vibrio metschnikovii CIP 69.14]
Length = 232
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 147/233 (63%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K+
Sbjct: 3 KAVVVFSGGQDSTTCLVQALQEFDEVHAITFDYGQRHKLEIEVAQQLALKL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++
Sbjct: 54 GVKAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G I+ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 114 GADTIITGVCETDFSGYPDCRNDFVKAMNHALVQGMDRQLTIRTPLMWLNKAETWALADQ 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++L+ E+ TCY G G GC +CPAC LR+ G ++ + Q
Sbjct: 174 YQA---LDLVRNETLTCYNG------MIGDGCGTCPACELRKAGLNQYLQHPQ 217
>gi|330994294|ref|ZP_08318222.1| 7-cyano-7-deazaguanine synthase [Gluconacetobacter sp. SXCC-1]
gi|329758761|gb|EGG75277.1| 7-cyano-7-deazaguanine synthase [Gluconacetobacter sp. SXCC-1]
Length = 245
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 133/235 (56%), Positives = 169/235 (71%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ VELECR +R+ +
Sbjct: 7 PSTPAREAALVLFSGGQDSATCLAWALARFGRVETLGFDYGQRHAVELECRATLREGMAT 66
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
P+W LG DH L LA+LG +S ++LT+ + + +N LPNTFVPGRN++FL FAA L
Sbjct: 67 ENPQWAARLGADHTLDLAVLGTLSDTALTREAEITLNENGLPNTFVPGRNLLFLTFAAAL 126
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A R I +I+ GVCETDYSGYPDCR DTI++++ +NLGM SH +HTPLMWL K TW+
Sbjct: 127 AARRNIRHIITGVCETDYSGYPDCRDDTIKSLQVTLNLGMASHYVLHTPLMWLDKARTWE 186
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA+ +GG LV LI ESH+CYLG R + WG+GC +CPAC LR+ GW F +
Sbjct: 187 LARTLGGDALVGLINRESHSCYLGTRGTLHPWGHGCGTCPACQLRKAGWERFLAE 241
>gi|196247862|ref|ZP_03146564.1| exsB protein [Geobacillus sp. G11MC16]
gi|196212646|gb|EDY07403.1| exsB protein [Geobacillus sp. G11MC16]
Length = 223
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 145/237 (61%), Gaps = 21/237 (8%)
Query: 5 IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E+E + ++
Sbjct: 1 MKMNEEKAVVVFSGGQDSTTCLFWAKKQFAEVEAVTFDYGQRHRREIEVAASIADELG-- 58
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+L +++LG ++ ++LT+ +A++ ++ LP TFV GRN++FL FAA L
Sbjct: 59 --------VRHTVLDMSLLGQLAPNALTRGEIAIEQKEGELPTTFVDGRNLLFLSFAAVL 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + G +IV GVCETD+SGYPDCR I+++ +NL M+ ++TPLMWL K ETWK
Sbjct: 111 AKQRGARHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYPFVIYTPLMWLTKAETWK 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA ++G + V ++ TCY G GC CPAC LR++G E+ ++
Sbjct: 171 LADELGALEFVR---TKTLTCYNGV------IADGCGECPACVLRKRGLEEYLQEKA 218
>gi|258627552|ref|ZP_05722329.1| ExsB protein [Vibrio mimicus VM603]
gi|258580134|gb|EEW05106.1| ExsB protein [Vibrio mimicus VM603]
Length = 231
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 147/233 (63%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVAAHKVMDVGLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 113 IGAATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC+LR+ G ++
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACHLRKSGLNDYLNNR 216
>gi|110816227|sp|Q5L1C0|QUEC_GEOKA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 221
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 96/241 (39%), Positives = 145/241 (60%), Gaps = 25/241 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN+ A+++FSGGQDS+TCL WA +F VE ++FDYGQR++ E++ + ++
Sbjct: 1 MNE-----EKAVVVFSGGQDSTTCLFWAKKQFGEVEAVTFDYGQRHRREIDVAQAIADEL 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+L L++LG ++ ++LT+ ++A++ + LP TFV GRN++FL FA
Sbjct: 56 G----------VRHTVLDLSLLGQLAPNALTRRDIAIEQKKGELPTTFVDGRNLLFLSFA 105
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A + G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K E
Sbjct: 106 AVFAKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAE 165
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKLA ++G + I ++ TCY G GC CPAC LR++G E+ +
Sbjct: 166 TWKLADELGA---LEFIRTKTLTCYNGI------IADGCGECPACALRKRGLDEYLREKA 216
Query: 240 D 240
+
Sbjct: 217 E 217
>gi|229543595|ref|ZP_04432655.1| exsB protein [Bacillus coagulans 36D1]
gi|229328015|gb|EEN93690.1| exsB protein [Bacillus coagulans 36D1]
Length = 221
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 98/232 (42%), Positives = 141/232 (60%), Gaps = 21/232 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +F VE ++FDYGQR+++E+EC + +++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAKKKFQEVEAVTFDYGQRHRLEIECAKNIAEELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAM--KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ HIL + +L ++ ++LT+ D LPNTFVPGRN++FL FA LA
Sbjct: 57 -----VKQHILDMQLLNQLAPNALTRESITVKAGADGELPNTFVPGRNLLFLSFAGVLAS 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMW K ETW LA
Sbjct: 112 QIGARHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLSMDQQFVIHTPLMWRNKAETWALA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G D V E++ TCY G GC CPAC LR++G ++
Sbjct: 172 DELGAFDFVR---EKTLTCYNGI------IADGCGECPACKLRKRGLEQYLA 214
>gi|306831583|ref|ZP_07464741.1| transcription regulator ExsB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426368|gb|EFM29482.1| transcription regulator ExsB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 242
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 104/231 (45%), Positives = 153/231 (66%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL +D VET++F+YGQR+ +E+E +
Sbjct: 29 KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIEVAKHIA--------- 79
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++A++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 80 -AEQGVKNHLLDMSLLGQLTENALTRDIAIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 138
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 139 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADQ 198
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + E + TCY G + G GC CPAC LRQ G ++ K
Sbjct: 199 LGKF---DYVRENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 240
>gi|153836122|ref|ZP_01988789.1| ExsB protein [Vibrio parahaemolyticus AQ3810]
gi|149750397|gb|EDM61142.1| ExsB protein [Vibrio parahaemolyticus AQ3810]
Length = 232
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 144/232 (62%), Gaps = 21/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K +
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEIAQKIAKDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR D ++++ TA+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 113 IGADTVITGVCETDFSGYPDCRDDFVKSMNTALAKGMDRALTIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + L+ E + TCY G G GC CP+C LR+ G E+
Sbjct: 173 QY---NALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDEYLNN 215
>gi|163800818|ref|ZP_02194718.1| exsB protein [Vibrio sp. AND4]
gi|159175167|gb|EDP59964.1| exsB protein [Vibrio sp. AND4]
Length = 232
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 96/232 (41%), Positives = 141/232 (60%), Gaps = 21/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V + +
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAEKVAQDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ +Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVGLLNELAISSLTRDDIPVSHDLQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR D ++A+ +A+ GM+ + TPLMWL K ETW LA
Sbjct: 113 IGAETVITGVCETDFSGYPDCRDDFVKAMNSALVKGMDRQFEIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D + L+ E + TCY G G GC CP+C LR+ G ++
Sbjct: 173 QY---DALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDDYLSN 215
>gi|262171604|ref|ZP_06039282.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus MB-451]
gi|261892680|gb|EEY38666.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus MB-451]
Length = 231
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ +Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVAAHKVMDVGLLNELAISSLTRDDIPVSHDLQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 113 IGAATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC+LR+ G ++
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACHLRKAGLNDYLNNR 216
>gi|323497329|ref|ZP_08102347.1| queuosine biosynthesis protein QueC [Vibrio sinaloensis DSM 21326]
gi|323317412|gb|EGA70405.1| queuosine biosynthesis protein QueC [Vibrio sinaloensis DSM 21326]
Length = 235
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 145/234 (61%), Gaps = 21/234 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K++
Sbjct: 2 RKAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHKLEIEVAQSLAKEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++QDN LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVGLLNELAISSLTRDDIPVSHELQDNGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + +++I ++ LGM+ + TPLMWL K ETW LA
Sbjct: 113 IGAQAVITGVCETDFSGYPDCRDEFVKSINRSLVLGMDRQFEIETPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D + L+ E++ TCY G G GC CP+C LR+ G ++ +
Sbjct: 173 QY---DALQLVREKTLTCYNGI------IGDGCGDCPSCELRKVGLSDYLSNRE 217
>gi|240137710|ref|YP_002962181.1| putative regulator, ATP-binding [Methylobacterium extorquens AM1]
gi|254560280|ref|YP_003067375.1| regulator, ATP-binding [Methylobacterium extorquens DM4]
gi|240007678|gb|ACS38904.1| Putative regulator, ATP-binding [Methylobacterium extorquens AM1]
gi|254267558|emb|CAX23400.1| Putative regulator, ATP-binding [Methylobacterium extorquens DM4]
Length = 243
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 136/229 (59%), Positives = 175/229 (76%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+LFSGGQDS+TCL+WALDRF VETL FDYGQR++VEL+ R +R+ + L P W L
Sbjct: 15 LVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHRVELDRRAALRQGLTALDPAWGRRL 74
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
G DH L LA LG+IS ++LT++ A+ + LPNTFVPGRN+ FL FAA LAYR G+ +I
Sbjct: 75 GPDHTLALAALGEISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRHI 134
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K +TW LA+ +GG+
Sbjct: 135 VGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAETLGGRA 194
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LV+L++EESHTCYLG+R R+EWGYGC +CPAC LR KG+ + +
Sbjct: 195 LVDLVVEESHTCYLGERGARHEWGYGCGTCPACDLRAKGFSRYLAARAE 243
>gi|229057066|ref|ZP_04196458.1| hypothetical protein bcere0026_11820 [Bacillus cereus AH603]
gi|229132237|ref|ZP_04261093.1| hypothetical protein bcere0014_11750 [Bacillus cereus BDRD-ST196]
gi|229166274|ref|ZP_04294033.1| hypothetical protein bcere0007_12480 [Bacillus cereus AH621]
gi|228617219|gb|EEK74285.1| hypothetical protein bcere0007_12480 [Bacillus cereus AH621]
gi|228651175|gb|EEL07154.1| hypothetical protein bcere0014_11750 [Bacillus cereus BDRD-ST196]
gi|228720207|gb|EEL71786.1| hypothetical protein bcere0026_11820 [Bacillus cereus AH603]
Length = 223
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+ +F+ VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIQQFEEVEAVTFNYNQRHKLEIDCAAEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ IL +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTILDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|328468976|gb|EGF39936.1| queuosine biosynthesis protein QueC [Vibrio parahaemolyticus 10329]
Length = 232
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 144/232 (62%), Gaps = 21/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K +
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKIAKDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR D ++++ TA+ GME +T+ TPLMWL K ETW LA
Sbjct: 113 IGADTVITGVCETDFSGYPDCRDDFVKSMNTALVKGMERALTIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + L+ E + TCY G G GC CP+C LR+ G ++
Sbjct: 173 QY---NALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDDYLNN 215
>gi|228957712|ref|ZP_04119456.1| hypothetical protein bthur0005_12280 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801955|gb|EEM48828.1| hypothetical protein bthur0005_12280 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 223
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKLA ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLADELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|258621537|ref|ZP_05716570.1| ExsB protein [Vibrio mimicus VM573]
gi|258586155|gb|EEW10871.1| ExsB protein [Vibrio mimicus VM573]
Length = 231
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ +Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVAAHKVMDVGLLNELAISSLTRDDIPVSHDLQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 113 IGAATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC+LR+ G ++
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACHLRKSGLNDYLNNR 216
>gi|260768532|ref|ZP_05877466.1| queuosine Biosynthesis QueC ATPase [Vibrio furnissii CIP 102972]
gi|260616562|gb|EEX41747.1| queuosine Biosynthesis QueC ATPase [Vibrio furnissii CIP 102972]
Length = 229
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 149/234 (63%), Gaps = 21/234 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + KK+
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQTLAKKL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVGLLNELAISSLTRDDIPVSNELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ +A+ LGM+ + + TPLMWL K ETW +A
Sbjct: 113 IGAQTVITGVCETDFSGYPDCRNDFVKAMNSALVLGMDRELEICTPLMWLNKAETWAMAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G + L+ E+ TCY G G GC CP+C+LR+ G ++ E +
Sbjct: 173 QNGA---LELVRHETLTCYNGI------MGDGCGDCPSCHLRKVGLNDYLEHRE 217
>gi|149191046|ref|ZP_01869306.1| predicted aluminum resistance protein [Vibrio shilonii AK1]
gi|148835074|gb|EDL52051.1| predicted aluminum resistance protein [Vibrio shilonii AK1]
Length = 228
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 149/235 (63%), Gaps = 21/235 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL+++D V ++FDYGQR+K+E+E + K+
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALEQYDEVHAITFDYGQRHKLEIEVAEALANKL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ +++L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -NVKAHKVMDVSLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D I+A+ +A+ GM+ + TPLMWL K ETW LA
Sbjct: 113 IGAQAVITGVCETDFSGYPDCRNDFIKALNSALVQGMDREFDIVTPLMWLDKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ ++LI EE+ TCY G G GC CP+C LR G + E +
Sbjct: 173 K---FNALSLIREETLTCYNGV------IGDGCGDCPSCDLRANGLNHYLENKSE 218
>gi|229010736|ref|ZP_04167933.1| hypothetical protein bmyco0001_11910 [Bacillus mycoides DSM 2048]
gi|228750410|gb|EEM00239.1| hypothetical protein bmyco0001_11910 [Bacillus mycoides DSM 2048]
Length = 223
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 155/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+ +F+ VE ++F+Y QR+K+E++C + + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIQQFEEVEAVTFNYNQRHKLEIDCAVEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ IL +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTILDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFIIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|228900021|ref|ZP_04064257.1| hypothetical protein bthur0014_12300 [Bacillus thuringiensis IBL
4222]
gi|228907072|ref|ZP_04070936.1| hypothetical protein bthur0013_12450 [Bacillus thuringiensis IBL
200]
gi|228964403|ref|ZP_04125517.1| hypothetical protein bthur0004_12520 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228795260|gb|EEM42752.1| hypothetical protein bthur0004_12520 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228852576|gb|EEM97366.1| hypothetical protein bthur0013_12450 [Bacillus thuringiensis IBL
200]
gi|228859635|gb|EEN04059.1| hypothetical protein bthur0014_12300 [Bacillus thuringiensis IBL
4222]
Length = 223
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAKIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|311067886|ref|YP_003972809.1| YkvJ protein [Bacillus atrophaeus 1942]
gi|310868403|gb|ADP31878.1| YkvJ [Bacillus atrophaeus 1942]
Length = 219
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 148/231 (64%), Gaps = 20/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR++ E++ + +++
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHQQEIDVAKAIAEELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT ++ ++ +D LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57 -----VKNHLLDMSLLNQLAPNALTRDDIKIEAKDGELPSTFVPGRNLVFLSFASILAYQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G D V + TCY G GC CPAC LR KG+ E+ E
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYEEYME 213
>gi|228914011|ref|ZP_04077633.1| hypothetical protein bthur0012_12480 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228845616|gb|EEM90645.1| hypothetical protein bthur0012_12480 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 223
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 155/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVKIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|226314168|ref|YP_002774064.1| queuosine biosynthesis protein [Brevibacillus brevis NBRC 100599]
gi|226097118|dbj|BAH45560.1| queuosine biosynthesis protein [Brevibacillus brevis NBRC 100599]
Length = 223
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 95/236 (40%), Positives = 147/236 (62%), Gaps = 20/236 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA ++F VETL+FDYGQR+K+E+EC + ++
Sbjct: 1 MMKKEKAVVVFSGGQDSTTCLFWAKEQFGEVETLTFDYGQRHKLEIECAQQIAAELG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA A
Sbjct: 58 -------VKNSVLDMSLLNQLAPNALTRTDIDITQEEGQLPSTFVDGRNLLFLSFAGVFA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TWKL
Sbjct: 111 KQRGARHLITGVCETDFSGYPDCRDAFIKSLNVTLNLSMDYPFVIHTPLMWLNKAQTWKL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A D+G I E + TCY G + G GC CPAC+LR+ G + +
Sbjct: 171 ADDLGAFT---YIRENTLTCYNGIK------GDGCGECPACHLRKAGLDTYLSEKN 217
>gi|218529380|ref|YP_002420196.1| exsB protein [Methylobacterium chloromethanicum CM4]
gi|259551539|sp|B7KR63|QUEC_METC4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218521683|gb|ACK82268.1| exsB protein [Methylobacterium chloromethanicum CM4]
Length = 243
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 137/229 (59%), Positives = 173/229 (75%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+LFSGGQDS+TCL+WALDRF VETL FDYGQR+ VEL+ R +R+ + L P W L
Sbjct: 15 LVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHWVELDRRAALRQGLTALDPAWGRRL 74
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
G DH L LA LG+IS ++LT++ A+ + LPNTFVPGRN+ FL FAA LAYR G+ +I
Sbjct: 75 GPDHTLALAALGEISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRHI 134
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G+CETDYSGYPDCR DTI+A++ A+NLGME +HTPLMW+ K +TW LA+ +GG+
Sbjct: 135 VGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAETLGGRA 194
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LV L++EESHTCYLG+R R+EWGYGC +CPAC LR KG+ + D
Sbjct: 195 LVELVVEESHTCYLGERGARHEWGYGCGTCPACDLRAKGFSRYLAARAD 243
>gi|163939247|ref|YP_001644131.1| exsB protein [Bacillus weihenstephanensis KBAB4]
gi|254764308|sp|A9VKR8|QUEC_BACWK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|163861444|gb|ABY42503.1| exsB protein [Bacillus weihenstephanensis KBAB4]
Length = 220
Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats.
Identities = 93/234 (39%), Positives = 151/234 (64%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F+ VE ++F+Y QR+K+E++C + + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIQQFEEVEAVTFNYNQRHKLEIDCAVEIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ IL +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----IKHTILDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216
>gi|306833728|ref|ZP_07466854.1| transcription regulator ExsB [Streptococcus bovis ATCC 700338]
gi|304424065|gb|EFM27205.1| transcription regulator ExsB [Streptococcus bovis ATCC 700338]
Length = 244
Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 152/231 (65%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL +D VET++F+YGQR+ +E+E +
Sbjct: 29 KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIEVAKHIA--------- 79
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 80 -AEQGVKNHLLDMSLLGQLTENALTRDIVIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 138
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 139 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADQ 198
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + E + TCY G + G GC CPAC LRQ G ++ K
Sbjct: 199 LGKF---DYVRENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 240
>gi|320546948|ref|ZP_08041249.1| transcription regulator ExsB [Streptococcus equinus ATCC 9812]
gi|320448350|gb|EFW89092.1| transcription regulator ExsB [Streptococcus equinus ATCC 9812]
Length = 217
Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 154/235 (65%), Gaps = 20/235 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VET++F+YGQR+ +E+E +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYEHVETVTFNYGQRHSLEIEVAKQIA--------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D+++PNTFV GRN +FL FAA LA RL
Sbjct: 53 -AEQGVKNHLLDMSLLGQLTENALTRDIEIENPDDDVPNTFVDGRNHLFLSFAAVLAKRL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADK 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY-QD 240
+G + + E + TCY G + G GC CP+C LRQ G ++ + QD
Sbjct: 172 LGKF---DYVRENTLTCYNGIK------GSGCGECPSCKLRQAGLEKYLARRGQD 217
>gi|229172079|ref|ZP_04299644.1| hypothetical protein bcere0006_11930 [Bacillus cereus MM3]
gi|228611422|gb|EEK68679.1| hypothetical protein bcere0006_11930 [Bacillus cereus MM3]
Length = 223
Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIKQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|126090178|ref|YP_001041659.1| queuosine biosynthesis protein QueC [Shewanella baltica OS155]
gi|126174471|ref|YP_001050620.1| queuosine biosynthesis protein QueC [Shewanella baltica OS155]
gi|217973440|ref|YP_002358191.1| queuosine biosynthesis protein QueC [Shewanella baltica OS223]
gi|254764383|sp|B8E544|QUEC_SHEB2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|125997676|gb|ABN61751.1| exsB protein [Shewanella baltica OS155]
gi|125999834|gb|ABN63904.1| hypothetical protein Sbal_4541 [Shewanella baltica OS155]
gi|217498575|gb|ACK46768.1| exsB protein [Shewanella baltica OS223]
Length = 240
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 96/232 (41%), Positives = 148/232 (63%), Gaps = 21/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 11 ASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL------- 63
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY
Sbjct: 64 --KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAY 121
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+LG I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 122 QLGAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALA 181
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++L+ + TCY G G GC CPAC+LR++G E+ +
Sbjct: 182 DKYQQ---LDLVRHHTLTCYNGV------IGDGCGDCPACHLRKRGLDEYMQ 224
>gi|327484036|gb|AEA78443.1| Queuosine Biosynthesis QueC ATPase [Vibrio cholerae LMA3894-4]
Length = 231
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVKAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|15614807|ref|NP_243110.1| aluminum resistance protein [Bacillus halodurans C-125]
gi|81786626|sp|Q9KAP3|QUEC_BACHD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|10174863|dbj|BAB05963.1| aluminum resistance protein [Bacillus halodurans C-125]
Length = 223
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K A+++FSGGQDS+TCL WAL FD V T++FDYGQR+ E+EC + +++
Sbjct: 1 MENKKKKAVVVFSGGQDSTTCLFWALKTFDEVATVTFDYGQRHAEEIECAKEIAEQLGVS 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNN-LPNTFVPGRNIIFLVFAAT 121
+L + +L ++ S+LT + +A+K +N LP+TFVPGRN +FL FAA
Sbjct: 61 F----------RVLDMTLLNQLTESALTREEIAVKDGENGELPSTFVPGRNQLFLSFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A ++G ++V GVCETDYSGYPDCR I+++ +NL M+ +HTPLMWL K ETW
Sbjct: 111 YAKQIGARHLVTGVCETDYSGYPDCRDVFIKSLNVTLNLAMDDQFVIHTPLMWLDKAETW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
KLA ++G ++ + E++ TCY G R G GC CPAC LR++G + + +
Sbjct: 171 KLADELGA---LDFVREKTLTCYHGIR------GDGCGECPACMLRRRGLELYLAEKE 219
>gi|293376552|ref|ZP_06622780.1| protein ExsB [Turicibacter sanguinis PC909]
gi|325839386|ref|ZP_08166825.1| protein ExsB [Turicibacter sp. HGF1]
gi|292644778|gb|EFF62860.1| protein ExsB [Turicibacter sanguinis PC909]
gi|325490506|gb|EGC92822.1| protein ExsB [Turicibacter sp. HGF1]
Length = 219
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 145/232 (62%), Gaps = 21/232 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+L+FSGGQDS+TCL WAL+ F V ++FDYGQR+ +ELEC + +++
Sbjct: 2 KQDKAVLVFSGGQDSTTCLYWALETFKEVIAVTFDYGQRHHLELECAKAICQELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNN-LPNTFVPGRNIIFLVFAATLAY 124
E H+L +++L ++ ++LT++ + +++ + LP+TFVPGRN++FL FA LA
Sbjct: 57 -----VEHHVLDMSLLNQLAPNALTRDEIKIELGEEGQLPSTFVPGRNLLFLSFAGVLAK 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TW+LA
Sbjct: 112 VKGAKHIITGVCETDFSGYPDCRDVFIKSLNVTLNLSMDDDFVIHTPLMWLNKAQTWELA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G + I E++ TCY G G GC CPAC LR++G +
Sbjct: 172 DKLGKFE---YIREKTLTCYNGI------IGDGCGECPACVLRRRGLESYLT 214
>gi|229521472|ref|ZP_04410891.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TM 11079-80]
gi|229341570|gb|EEO06573.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TM 11079-80]
Length = 231
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|228920152|ref|ZP_04083501.1| hypothetical protein bthur0011_11690 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228938555|ref|ZP_04101163.1| hypothetical protein bthur0008_12200 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228951821|ref|ZP_04113919.1| hypothetical protein bthur0006_12350 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228971434|ref|ZP_04132060.1| hypothetical protein bthur0003_12140 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978047|ref|ZP_04138426.1| hypothetical protein bthur0002_12510 [Bacillus thuringiensis Bt407]
gi|229016689|ref|ZP_04173622.1| hypothetical protein bcere0030_12600 [Bacillus cereus AH1273]
gi|229022901|ref|ZP_04179421.1| hypothetical protein bcere0029_12470 [Bacillus cereus AH1272]
gi|229043182|ref|ZP_04190905.1| hypothetical protein bcere0027_12360 [Bacillus cereus AH676]
gi|229068991|ref|ZP_04202284.1| hypothetical protein bcere0025_11990 [Bacillus cereus F65185]
gi|229078625|ref|ZP_04211182.1| hypothetical protein bcere0023_12900 [Bacillus cereus Rock4-2]
gi|229108896|ref|ZP_04238500.1| hypothetical protein bcere0018_11720 [Bacillus cereus Rock1-15]
gi|229126757|ref|ZP_04255769.1| hypothetical protein bcere0015_12140 [Bacillus cereus BDRD-Cer4]
gi|229144044|ref|ZP_04272460.1| hypothetical protein bcere0012_12070 [Bacillus cereus BDRD-ST24]
gi|229177847|ref|ZP_04305220.1| hypothetical protein bcere0005_12110 [Bacillus cereus 172560W]
gi|228605638|gb|EEK63086.1| hypothetical protein bcere0005_12110 [Bacillus cereus 172560W]
gi|228639441|gb|EEK95855.1| hypothetical protein bcere0012_12070 [Bacillus cereus BDRD-ST24]
gi|228656697|gb|EEL12523.1| hypothetical protein bcere0015_12140 [Bacillus cereus BDRD-Cer4]
gi|228674552|gb|EEL29792.1| hypothetical protein bcere0018_11720 [Bacillus cereus Rock1-15]
gi|228704695|gb|EEL57124.1| hypothetical protein bcere0023_12900 [Bacillus cereus Rock4-2]
gi|228714103|gb|EEL65985.1| hypothetical protein bcere0025_11990 [Bacillus cereus F65185]
gi|228726144|gb|EEL77378.1| hypothetical protein bcere0027_12360 [Bacillus cereus AH676]
gi|228738436|gb|EEL88912.1| hypothetical protein bcere0029_12470 [Bacillus cereus AH1272]
gi|228744597|gb|EEL94666.1| hypothetical protein bcere0030_12600 [Bacillus cereus AH1273]
gi|228781708|gb|EEM29907.1| hypothetical protein bthur0002_12510 [Bacillus thuringiensis Bt407]
gi|228788301|gb|EEM36254.1| hypothetical protein bthur0003_12140 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228807744|gb|EEM54265.1| hypothetical protein bthur0006_12350 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228821153|gb|EEM67170.1| hypothetical protein bthur0008_12200 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228839608|gb|EEM84900.1| hypothetical protein bthur0011_11690 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 223
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|229160392|ref|ZP_04288390.1| hypothetical protein bcere0009_11860 [Bacillus cereus R309803]
gi|228623116|gb|EEK79944.1| hypothetical protein bcere0009_11860 [Bacillus cereus R309803]
Length = 223
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAADIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + Q+ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHQEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|311030028|ref|ZP_07708118.1| aluminum resistance protein [Bacillus sp. m3-13]
gi|311032348|ref|ZP_07710438.1| aluminum resistance protein [Bacillus sp. m3-13]
Length = 223
Score = 287 bits (736), Expect = 8e-76, Method: Composition-based stats.
Identities = 95/236 (40%), Positives = 151/236 (63%), Gaps = 20/236 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ A+++FSGGQDS+TCL WA+ FD VE ++F YGQR+++E++C + K++
Sbjct: 1 MKQKEKAMVVFSGGQDSTTCLIWAMKEFDEVEAVTFHYGQRHELEIDCATSIAKELG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ IL +++LG ++ ++LT++ + ++ ++ LP+TFV GRN++FL FAA A
Sbjct: 58 -------VKHRILDMSLLGQLTPNALTRDNIEIEEKEGELPSTFVDGRNLLFLSFAAVAA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++G +IV GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW+L
Sbjct: 111 KQIGARHIVTGVCETDFSGYPDCRDVFIKSMNVTLNLSMDYPFVIHTPLMWLNKEETWEL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A D+ D ++ + ++ TCY G GC CPAC LR++G ++ K
Sbjct: 171 ADDL---DALDFVRTKTLTCYNGV------IADGCGECPACKLRKRGLDDYLVKKN 217
>gi|164506981|gb|ABY59726.1| aluminum resistance protein [Anoxybacillus gonensis]
Length = 221
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 145/234 (61%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA F VE ++FDY QR+++E++ + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAKKHFAEVEAVTFDYNQRHRLEIDVAASIAKELN----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L +++L ++ ++LT+ ++A++ ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----VPHTVLDMSLLNQLAPNALTRSDIAIEQKEGQLPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA
Sbjct: 112 KGARHLVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYQFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V ++ TCY G GC CPAC LR++G ++ + +
Sbjct: 172 ELGALEFVR---NKTLTCYNGI------IADGCGECPACVLRKRGLDQYMNEKK 216
>gi|65318709|ref|ZP_00391668.1| COG0603: Predicted PP-loop superfamily ATPase [Bacillus anthracis
str. A2012]
gi|228926470|ref|ZP_04089542.1| hypothetical protein bthur0010_11890 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228932722|ref|ZP_04095594.1| hypothetical protein bthur0009_11980 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228945038|ref|ZP_04107399.1| hypothetical protein bthur0007_12040 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229120979|ref|ZP_04250221.1| hypothetical protein bcere0016_12880 [Bacillus cereus 95/8201]
gi|229183633|ref|ZP_04310856.1| hypothetical protein bcere0004_12050 [Bacillus cereus BGSC 6E1]
gi|228599876|gb|EEK57473.1| hypothetical protein bcere0004_12050 [Bacillus cereus BGSC 6E1]
gi|228662639|gb|EEL18237.1| hypothetical protein bcere0016_12880 [Bacillus cereus 95/8201]
gi|228814707|gb|EEM60967.1| hypothetical protein bthur0007_12040 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228826927|gb|EEM72689.1| hypothetical protein bthur0009_11980 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228833294|gb|EEM78859.1| hypothetical protein bthur0010_11890 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 223
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 155/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|224475853|ref|YP_002633459.1| putative ExsB family protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420460|emb|CAL27274.1| putative ExsB family protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 223
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 149/238 (62%), Gaps = 20/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M AL++FSGGQDS+TCL +A ++F+ VE ++F YGQR+ E+E V KKI
Sbjct: 1 MASHTLDDNKALVVFSGGQDSTTCLFYAKEKFEEVELVTFQYGQRHDTEIE----VAKKI 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + + HIL +++L ++ ++LT+ N+ ++ D+ +PNTFVP RN++FL FA
Sbjct: 57 AD------EQGLKHHILDMSLLSQLTPNALTQHNLEIEQTDDGVPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY++ +I+ GVCETD+SGYPDCR D ++++ +NL M+ + +HTPLMWL K E
Sbjct: 111 GALAYQIKARHIITGVCETDFSGYPDCRDDFVKSMNVTLNLSMDKNFVIHTPLMWLDKKE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TW L+ +G +++ + ++ TCY G GC CPAC LR +G + E+
Sbjct: 171 TWALSDQLG---VLDYVRNQTLTCYNGI------IADGCGECPACKLRARGLNAYLEE 219
>gi|160875274|ref|YP_001554590.1| queuosine biosynthesis protein QueC [Shewanella baltica OS195]
gi|189029312|sp|A9L185|QUEC_SHEB9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|160860796|gb|ABX49330.1| exsB protein [Shewanella baltica OS195]
gi|315267468|gb|ADT94321.1| exsB protein [Shewanella baltica OS678]
Length = 240
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 95/232 (40%), Positives = 148/232 (63%), Gaps = 21/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 11 ASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL------- 63
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY
Sbjct: 64 --KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAY 121
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+LG I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 122 QLGADAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALA 181
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++L+ + TCY G G GC CPAC+LR++G ++ +
Sbjct: 182 DKYQQ---LDLVRHHTLTCYNGI------IGDGCGDCPACHLRKRGLDDYLQ 224
>gi|320156524|ref|YP_004188903.1| queuosine Biosynthesis QueC ATPase [Vibrio vulnificus MO6-24/O]
gi|319931836|gb|ADV86700.1| queuosine Biosynthesis QueC ATPase [Vibrio vulnificus MO6-24/O]
Length = 231
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 95/233 (40%), Positives = 149/233 (63%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL+ FD V ++FDYGQR+++E+E + K++
Sbjct: 3 KAVVVFSGGQDSTTCLVKALNEFDEVHAITFDYGQRHRLEIEVAQNLAKEL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++
Sbjct: 54 GVAAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G I+ GVCETD+SGYPDCR D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 114 GAQTIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKPLVIQTPLMWLNKAETWALADQ 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ + L+ E++ TCY G G GC CP+C+LR+ G ++ + +
Sbjct: 174 ---NNALQLVREKTLTCYNGI------IGDGCGDCPSCHLRKVGLNDYLDNRE 217
>gi|153000639|ref|YP_001366320.1| queuosine biosynthesis protein QueC [Shewanella baltica OS185]
gi|189029311|sp|A6WN68|QUEC_SHEB8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151365257|gb|ABS08257.1| exsB protein [Shewanella baltica OS185]
Length = 240
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 95/233 (40%), Positives = 148/233 (63%), Gaps = 21/233 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 10 SASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL------ 63
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A A
Sbjct: 64 ---KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y+LG I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW L
Sbjct: 121 YQLGAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A ++L+ + TCY G G GC CPAC+LR++G ++ +
Sbjct: 181 ADKYQQ---LDLVRHHTLTCYNGV------IGDGCGDCPACHLRKRGLDDYLQ 224
>gi|37679725|ref|NP_934334.1| queuosine biosynthesis protein QueC [Vibrio vulnificus YJ016]
gi|81757651|sp|Q7ML86|QUEC_VIBVY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|37198470|dbj|BAC94305.1| predicted ATPase [Vibrio vulnificus YJ016]
Length = 232
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 95/233 (40%), Positives = 149/233 (63%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL+ FD V ++FDYGQR+++E+E + K++
Sbjct: 3 KAVVVFSGGQDSTTCLVKALNEFDEVHAITFDYGQRHRLEIEVAQNLAKEL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++
Sbjct: 54 GVAAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G I+ GVCETD+SGYPDCR D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 114 GAETIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKPLVIQTPLMWLNKAETWALADQ 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ + L+ E++ TCY G G GC CP+C+LR+ G ++ + +
Sbjct: 174 ---NNALQLVREKTLTCYNGI------VGDGCGDCPSCHLRKVGLNDYLDNRE 217
>gi|118476910|ref|YP_894061.1| aluminum resistance protein [Bacillus thuringiensis str. Al Hakam]
gi|229090393|ref|ZP_04221636.1| hypothetical protein bcere0021_12220 [Bacillus cereus Rock3-42]
gi|118416135|gb|ABK84554.1| preQ(0) biosynthesis protein QueC [Bacillus thuringiensis str. Al
Hakam]
gi|228692976|gb|EEL46694.1| hypothetical protein bcere0021_12220 [Bacillus cereus Rock3-42]
Length = 223
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|120598963|ref|YP_963537.1| queuosine biosynthesis protein QueC [Shewanella sp. W3-18-1]
gi|146292952|ref|YP_001183376.1| queuosine biosynthesis protein QueC [Shewanella putrefaciens CN-32]
gi|120559056|gb|ABM24983.1| exsB protein [Shewanella sp. W3-18-1]
gi|145564642|gb|ABP75577.1| exsB protein [Shewanella putrefaciens CN-32]
gi|319426519|gb|ADV54593.1| exsB protein [Shewanella putrefaciens 200]
Length = 245
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 147/233 (63%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 18 KAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL--------- 68
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+L
Sbjct: 69 KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQL 128
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 129 GAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALADK 188
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++L+ + TCY G G GC CPAC+LR++G ++ +
Sbjct: 189 YQQ---LDLVRHHTLTCYNGV------IGDGCGDCPACHLRKRGLDDYLQNKA 232
>gi|228984515|ref|ZP_04144692.1| hypothetical protein bthur0001_12200 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229155007|ref|ZP_04283121.1| hypothetical protein bcere0010_12010 [Bacillus cereus ATCC 4342]
gi|228628565|gb|EEK85278.1| hypothetical protein bcere0010_12010 [Bacillus cereus ATCC 4342]
gi|228775218|gb|EEM23607.1| hypothetical protein bthur0001_12200 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 223
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCATEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|218896373|ref|YP_002444784.1| exsB protein [Bacillus cereus G9842]
gi|254764303|sp|B7IN35|QUEC_BACC2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218543833|gb|ACK96227.1| exsB protein [Bacillus cereus G9842]
Length = 220
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 150/234 (64%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAKIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216
>gi|149179803|ref|ZP_01858308.1| possible aluminum resistance protein [Bacillus sp. SG-1]
gi|148851995|gb|EDL66140.1| possible aluminum resistance protein [Bacillus sp. SG-1]
Length = 220
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 141/233 (60%), Gaps = 19/233 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K AL++FSGGQDS+TCL WA F VE ++F+YGQR+ EL+C + +++
Sbjct: 2 KNEKALVVFSGGQDSTTCLIWAKKEFKEVEAVTFNYGQRHSFELDCAREIAEELN----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
H+L +++L +S S+LT++ + ++ LP+TFVPGRN++F FA LA +
Sbjct: 57 -----VRHHVLDMSLLNQLSPSALTRDEEITEKEGELPSTFVPGRNLLFFSFAGVLAKNI 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +IV G+CETD+SGYPDCR ++ +NL ++ +HTPLMW+ K TWK A D
Sbjct: 112 GAKHIVTGICETDFSGYPDCRDIFAKSFNVTLNLALDEGYVLHTPLMWMDKEATWKWADD 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G ++ I E++ TCY G R G GC +CP+C LR KG ++ +
Sbjct: 172 MG---VLQYIREKTLTCYNGIR------GDGCGTCPSCKLRSKGLSDYLSSKK 215
>gi|15641378|ref|NP_231010.1| queuosine biosynthesis protein QueC [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121728522|ref|ZP_01681545.1| exsB protein [Vibrio cholerae V52]
gi|147673208|ref|YP_001216925.1| queuosine biosynthesis protein QueC [Vibrio cholerae O395]
gi|153819361|ref|ZP_01972028.1| exsB protein [Vibrio cholerae NCTC 8457]
gi|153821348|ref|ZP_01974015.1| exsB protein [Vibrio cholerae B33]
gi|227081537|ref|YP_002810088.1| exsB protein [Vibrio cholerae M66-2]
gi|229505053|ref|ZP_04394563.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae BX 330286]
gi|229511277|ref|ZP_04400756.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae B33]
gi|229518395|ref|ZP_04407839.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC9]
gi|229608057|ref|YP_002878705.1| queuosine biosynthesis protein QueC [Vibrio cholerae MJ-1236]
gi|254848488|ref|ZP_05237838.1| exsB protein [Vibrio cholerae MO10]
gi|255745753|ref|ZP_05419701.1| queuosine Biosynthesis QueC ATPase [Vibrio cholera CIRS 101]
gi|262158969|ref|ZP_06030081.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae INDRE 91/1]
gi|262169328|ref|ZP_06037020.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC27]
gi|262192385|ref|ZP_06050538.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae CT 5369-93]
gi|298498550|ref|ZP_07008357.1| exsB protein [Vibrio cholerae MAK 757]
gi|81545006|sp|Q9KS93|QUEC_VIBCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|172047686|sp|A5F8G4|QUEC_VIBC3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764389|sp|C3LM61|QUEC_VIBCM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|9655860|gb|AAF94524.1| exsB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121629186|gb|EAX61626.1| exsB protein [Vibrio cholerae V52]
gi|126510106|gb|EAZ72700.1| exsB protein [Vibrio cholerae NCTC 8457]
gi|126521166|gb|EAZ78389.1| exsB protein [Vibrio cholerae B33]
gi|146315091|gb|ABQ19630.1| exsB protein [Vibrio cholerae O395]
gi|227009425|gb|ACP05637.1| exsB protein [Vibrio cholerae M66-2]
gi|227013283|gb|ACP09493.1| exsB protein [Vibrio cholerae O395]
gi|229345110|gb|EEO10084.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC9]
gi|229351242|gb|EEO16183.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae B33]
gi|229357276|gb|EEO22193.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae BX 330286]
gi|229370712|gb|ACQ61135.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae MJ-1236]
gi|254844193|gb|EET22607.1| exsB protein [Vibrio cholerae MO10]
gi|255736828|gb|EET92225.1| queuosine Biosynthesis QueC ATPase [Vibrio cholera CIRS 101]
gi|262022141|gb|EEY40850.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC27]
gi|262029154|gb|EEY47806.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae INDRE 91/1]
gi|262031738|gb|EEY50323.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae CT 5369-93]
gi|297542883|gb|EFH78933.1| exsB protein [Vibrio cholerae MAK 757]
Length = 231
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|153825260|ref|ZP_01977927.1| exsB protein [Vibrio cholerae MZO-2]
gi|153828777|ref|ZP_01981444.1| exsB protein [Vibrio cholerae 623-39]
gi|183179364|ref|ZP_02957575.1| exsB protein [Vibrio cholerae MZO-3]
gi|254286182|ref|ZP_04961142.1| exsB protein [Vibrio cholerae AM-19226]
gi|148875730|gb|EDL73865.1| exsB protein [Vibrio cholerae 623-39]
gi|149741088|gb|EDM55147.1| exsB protein [Vibrio cholerae MZO-2]
gi|150423851|gb|EDN15792.1| exsB protein [Vibrio cholerae AM-19226]
gi|183012775|gb|EDT88075.1| exsB protein [Vibrio cholerae MZO-3]
Length = 231
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|229149641|ref|ZP_04277872.1| hypothetical protein bcere0011_12000 [Bacillus cereus m1550]
gi|228633851|gb|EEK90449.1| hypothetical protein bcere0011_12000 [Bacillus cereus m1550]
Length = 223
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYKGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|229189522|ref|ZP_04316538.1| hypothetical protein bcere0002_12010 [Bacillus cereus ATCC 10876]
gi|228593967|gb|EEK51770.1| hypothetical protein bcere0002_12010 [Bacillus cereus ATCC 10876]
Length = 223
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ +G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDKLGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|229029111|ref|ZP_04185209.1| hypothetical protein bcere0028_12130 [Bacillus cereus AH1271]
gi|228732209|gb|EEL83093.1| hypothetical protein bcere0028_12130 [Bacillus cereus AH1271]
Length = 223
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDLEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|229138126|ref|ZP_04266724.1| hypothetical protein bcere0013_12500 [Bacillus cereus BDRD-ST26]
gi|229195636|ref|ZP_04322402.1| hypothetical protein bcere0001_12030 [Bacillus cereus m1293]
gi|228587885|gb|EEK45937.1| hypothetical protein bcere0001_12030 [Bacillus cereus m1293]
gi|228645471|gb|EEL01705.1| hypothetical protein bcere0013_12500 [Bacillus cereus BDRD-ST26]
Length = 223
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAMEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|218234594|ref|YP_002366123.1| exsB protein [Bacillus cereus B4264]
gi|254764305|sp|B7HH96|QUEC_BACC4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218162551|gb|ACK62543.1| protein ExsB [Bacillus cereus B4264]
Length = 220
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 150/234 (64%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWINKAETWKLSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216
>gi|297578951|ref|ZP_06940879.1| exsB protein [Vibrio cholerae RC385]
gi|297536545|gb|EFH75378.1| exsB protein [Vibrio cholerae RC385]
Length = 231
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 148/233 (63%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T ++ GVCETD+SGYPDCRH+ ++A+ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 113 IGATTVITGVCETDFSGYPDCRHEFVQAMNQALAKGMDLPLTIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|27366010|ref|NP_761538.1| queuosine biosynthesis protein QueC [Vibrio vulnificus CMCP6]
gi|81447969|sp|Q8D985|QUEC_VIBVU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|27362210|gb|AAO11065.1| Queuosine Biosynthesis QueC ATPase [Vibrio vulnificus CMCP6]
Length = 231
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 95/233 (40%), Positives = 149/233 (63%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL+ FD V ++FDYGQR+++E+E + K++
Sbjct: 3 KAVVVFSGGQDSTTCLVKALNEFDEVHAITFDYGQRHRLEIEVAQNLAKEL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++
Sbjct: 54 GVAAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G I+ GVCETD+SGYPDCR D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 114 GAQTIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKPLVIQTPLMWLNKTETWALADQ 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ + L+ E++ TCY G G GC CP+C+LR+ G ++ + +
Sbjct: 174 ---NNALQLVREKTLTCYNGI------IGDGCGDCPSCHLRKVGLNDYLDNRE 217
>gi|114563048|ref|YP_750561.1| exsB protein [Shewanella frigidimarina NCIMB 400]
gi|122299841|sp|Q082U2|QUEC_SHEFN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114334341|gb|ABI71723.1| exsB protein [Shewanella frigidimarina NCIMB 400]
Length = 235
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 99/243 (40%), Positives = 149/243 (61%), Gaps = 22/243 (9%)
Query: 1 MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M+D + P AL++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + +
Sbjct: 1 MSDAKQNTPTKALVVFSGGQDSTTCLIQALSQYDEVHGITFDYGQRHRQEIEVAKSLATE 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFL 116
+ L ++ +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL
Sbjct: 61 L---------KLASHKVMDTTLLNELAISALTRDAIPVSHELMNNGLPNTFVPGRNILFL 111
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
A AY+LG I+ GVCETD+SGYPDCR++ +++++ ++ LGM+ + + TPLMWL
Sbjct: 112 TLAGIYAYQLGCDAIITGVCETDFSGYPDCRNEFVQSMQNSLALGMDKPLKIITPLMWLN 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K ETW LA LV ++ TCY G G GC CPAC LRQ+G ++ +
Sbjct: 172 KAETWALADKYQQLALVQ---HQTLTCYNGI------VGKGCGDCPACVLRQRGLDDYLQ 222
Query: 237 KYQ 239
Q
Sbjct: 223 NSQ 225
>gi|189029590|sp|A1RJY8|QUEC_SHESW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189029599|sp|A4Y6J4|QUEC_SHEPC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 240
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 147/233 (63%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 13 KAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL--------- 63
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+L
Sbjct: 64 KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQL 123
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 124 GAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALADK 183
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++L+ + TCY G G GC CPAC+LR++G ++ +
Sbjct: 184 YQQ---LDLVRHHTLTCYNGV------IGDGCGDCPACHLRKRGLDDYLQNKA 227
>gi|304408668|ref|ZP_07390289.1| exsB protein [Shewanella baltica OS183]
gi|307305497|ref|ZP_07585245.1| exsB protein [Shewanella baltica BA175]
gi|304352489|gb|EFM16886.1| exsB protein [Shewanella baltica OS183]
gi|306911800|gb|EFN42225.1| exsB protein [Shewanella baltica BA175]
Length = 249
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 95/232 (40%), Positives = 148/232 (63%), Gaps = 21/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K++
Sbjct: 20 ASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL------- 72
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ + +L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY
Sbjct: 73 --KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAY 130
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+LG I+ GVCETD+SGYPDCR+D ++A+E+A+ GM+ + + TPLMWL K +TW LA
Sbjct: 131 QLGAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALA 190
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++L+ + TCY G G GC CPAC+LR++G ++ +
Sbjct: 191 DKYQQ---LDLVRHHTLTCYNGV------IGDGCGDCPACHLRKRGLDDYLQ 233
>gi|325978489|ref|YP_004288205.1| queuosine biosynthesis protein queC [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325178417|emb|CBZ48461.1| queuosine biosynthesis protein queC [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 215
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 152/231 (65%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL +D VET++F+YGQR+ +E+E +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIEVAKHIA--------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 53 -AEQGVKNHLLDMSLLGQLTENALTRDIVIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + E + TCY G + G GC CPAC LRQ G ++ K
Sbjct: 172 LGKF---DYVRENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 213
>gi|171778271|ref|ZP_02919477.1| hypothetical protein STRINF_00319 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282971|gb|EDT48395.1| hypothetical protein STRINF_00319 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 216
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 102/232 (43%), Positives = 153/232 (65%), Gaps = 19/232 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL+ ++ VET++F+YGQR+ +E+E +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALEHYEHVETVTFNYGQRHSLEIEVAKHIA--------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 53 -AEQGVKNHLLDMSLLGQLTENALTRDIEIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M + +HTPLMWL K ETW+LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMNYNFVIHTPLMWLDKSETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G + + E + TCY G + G GC CPAC LRQ G ++ +
Sbjct: 172 LG---KFDYVRENTFTCYNGIK------GSGCGECPACKLRQAGLEKYLARR 214
>gi|212639795|ref|YP_002316315.1| putative PP-loop superfamily ATPase [Anoxybacillus flavithermus
WK1]
gi|254764299|sp|B7GLA4|QUEC_ANOFW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|212561275|gb|ACJ34330.1| Predicted PP-loop superfamily ATPase [Anoxybacillus flavithermus
WK1]
Length = 221
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 145/234 (61%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA F VE ++FDY QR+++E++ + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAKKHFAEVEAVTFDYNQRHRLEIDVAASIAKELN----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L +++L ++ ++LT+ ++A++ ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----VSHTVLDMSLLHQLAPNALTRSDIAIEQKEGQLPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA
Sbjct: 112 KGARHLVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYQFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V ++ TCY G GC CPAC LR++G ++ + +
Sbjct: 172 ELGALEFVR---NKTLTCYNGI------IADGCGECPACVLRKRGLDQYMNEKK 216
>gi|30019491|ref|NP_831122.1| aluminum resistance protein [Bacillus cereus ATCC 14579]
gi|206967667|ref|ZP_03228623.1| exsB protein [Bacillus cereus AH1134]
gi|296502021|ref|YP_003663721.1| aluminum resistance protein [Bacillus thuringiensis BMB171]
gi|81435436|sp|Q81G69|QUEC_BACCR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|29895035|gb|AAP08323.1| Aluminum resistance protein [Bacillus cereus ATCC 14579]
gi|206736587|gb|EDZ53734.1| exsB protein [Bacillus cereus AH1134]
gi|296323073|gb|ADH06001.1| aluminum resistance protein [Bacillus thuringiensis BMB171]
gi|326939064|gb|AEA14960.1| aluminum resistance protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 220
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 150/234 (64%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216
>gi|228990440|ref|ZP_04150405.1| hypothetical protein bpmyx0001_12020 [Bacillus pseudomycoides DSM
12442]
gi|228996541|ref|ZP_04156180.1| hypothetical protein bmyco0003_11280 [Bacillus mycoides Rock3-17]
gi|229004191|ref|ZP_04161992.1| hypothetical protein bmyco0002_11560 [Bacillus mycoides Rock1-4]
gi|228757052|gb|EEM06296.1| hypothetical protein bmyco0002_11560 [Bacillus mycoides Rock1-4]
gi|228763173|gb|EEM12081.1| hypothetical protein bmyco0003_11280 [Bacillus mycoides Rock3-17]
gi|228768966|gb|EEM17564.1| hypothetical protein bpmyx0001_12020 [Bacillus pseudomycoides DSM
12442]
Length = 223
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAADIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACKLRKAGLDTYLQERE 219
>gi|30261440|ref|NP_843817.1| exsB protein [Bacillus anthracis str. Ames]
gi|47526629|ref|YP_017978.1| ExsB family transcriptional regulator [Bacillus anthracis str.
'Ames Ancestor']
gi|49184274|ref|YP_027526.1| exsB protein [Bacillus anthracis str. Sterne]
gi|165870370|ref|ZP_02215025.1| exsB protein [Bacillus anthracis str. A0488]
gi|167634318|ref|ZP_02392639.1| exsB protein [Bacillus anthracis str. A0442]
gi|167639318|ref|ZP_02397590.1| exsB protein [Bacillus anthracis str. A0193]
gi|170686660|ref|ZP_02877880.1| exsB protein [Bacillus anthracis str. A0465]
gi|170706321|ref|ZP_02896782.1| exsB protein [Bacillus anthracis str. A0389]
gi|177651440|ref|ZP_02934229.1| exsB protein [Bacillus anthracis str. A0174]
gi|190568037|ref|ZP_03020947.1| exsB protein [Bacillus anthracis Tsiankovskii-I]
gi|196035303|ref|ZP_03102708.1| exsB protein [Bacillus cereus W]
gi|218902547|ref|YP_002450381.1| exsB protein [Bacillus cereus AH820]
gi|227815813|ref|YP_002815822.1| exsB protein [Bacillus anthracis str. CDC 684]
gi|229603244|ref|YP_002865853.1| exsB protein [Bacillus anthracis str. A0248]
gi|254682497|ref|ZP_05146358.1| exsB protein [Bacillus anthracis str. CNEVA-9066]
gi|254726160|ref|ZP_05187942.1| exsB protein [Bacillus anthracis str. A1055]
gi|254733913|ref|ZP_05191627.1| exsB protein [Bacillus anthracis str. Western North America
USA6153]
gi|254740397|ref|ZP_05198088.1| exsB protein [Bacillus anthracis str. Kruger B]
gi|254753787|ref|ZP_05205822.1| exsB protein [Bacillus anthracis str. Vollum]
gi|254758884|ref|ZP_05210911.1| exsB protein [Bacillus anthracis str. Australia 94]
gi|81582971|sp|Q81TC7|QUEC_BACAN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764300|sp|C3P4F6|QUEC_BACAA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764301|sp|C3LAL0|QUEC_BACAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764302|sp|B7JFS4|QUEC_BACC0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|30255294|gb|AAP25303.1| protein ExsB [Bacillus anthracis str. Ames]
gi|47501777|gb|AAT30453.1| exsB protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49178201|gb|AAT53577.1| exsB protein [Bacillus anthracis str. Sterne]
gi|164713865|gb|EDR19387.1| exsB protein [Bacillus anthracis str. A0488]
gi|167512757|gb|EDR88131.1| exsB protein [Bacillus anthracis str. A0193]
gi|167530206|gb|EDR92932.1| exsB protein [Bacillus anthracis str. A0442]
gi|170128855|gb|EDS97721.1| exsB protein [Bacillus anthracis str. A0389]
gi|170669183|gb|EDT19926.1| exsB protein [Bacillus anthracis str. A0465]
gi|172082718|gb|EDT67781.1| exsB protein [Bacillus anthracis str. A0174]
gi|190560771|gb|EDV14746.1| exsB protein [Bacillus anthracis Tsiankovskii-I]
gi|195991980|gb|EDX55943.1| exsB protein [Bacillus cereus W]
gi|218536698|gb|ACK89096.1| exsB protein [Bacillus cereus AH820]
gi|227003186|gb|ACP12929.1| protein ExsB [Bacillus anthracis str. CDC 684]
gi|229267652|gb|ACQ49289.1| exsB protein [Bacillus anthracis str. A0248]
Length = 220
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 151/234 (64%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216
>gi|328911421|gb|AEB63017.1| 7-cyano-7-deazaguanine synthase [Bacillus amyloliquefaciens LL3]
Length = 227
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 146/229 (63%), Gaps = 20/229 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR++ E++ + +K+
Sbjct: 10 KKEKAVVVFSGGQDSTTCLLWALQNFEEVETVTFHYNQRHQEEIDVAKSIAEKLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT ++ ++ +D LP TFVPGRN++FL FA+ LAY+
Sbjct: 65 -----VKNHLLDMSLLNQLAPNALTRDDIEIEAKDGELPTTFVPGRNLVFLSFASILAYQ 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 120 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC LR KG+ E+
Sbjct: 180 ELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYDEY 219
>gi|291483907|dbj|BAI84982.1| hypothetical protein BSNT_02306 [Bacillus subtilis subsp. natto
BEST195]
Length = 219
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 148/229 (64%), Gaps = 20/229 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR+ E+E + +K+
Sbjct: 2 KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEIEVAKSIAEKLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT+ ++ ++++D LP+TFVPGRN++FL FA+ LA++
Sbjct: 57 -----VKNHLLDMSLLNQLAPNALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAFQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKL
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLVD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G + V + TCY G GC CPAC+LR KG+ E+
Sbjct: 172 ELGALEFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211
>gi|229515738|ref|ZP_04405197.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TMA 21]
gi|229347507|gb|EEO12467.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TMA 21]
Length = 231
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSYELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|152974868|ref|YP_001374385.1| exsB protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|189038895|sp|A7GMN2|QUEC_BACCN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|152023620|gb|ABS21390.1| exsB protein [Bacillus cytotoxicus NVH 391-98]
Length = 220
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 93/234 (39%), Positives = 149/234 (63%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E+EC + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIECAANIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----IKHTVLDMSLLNQLAPNALTRTDIDITHEEGELPSTFVEGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K +TWKL+
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDAFVKSLNVTLNLSMDYPFVIHTPLMWIDKADTWKLSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G D V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 172 ELGAFDFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216
>gi|42780532|ref|NP_977779.1| exsB protein [Bacillus cereus ATCC 10987]
gi|47566228|ref|ZP_00237256.1| exsB protein [Bacillus cereus G9241]
gi|49479999|ref|YP_035565.1| aluminum resistance protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52143996|ref|YP_082831.1| aluminum resistance protein [Bacillus cereus E33L]
gi|196040637|ref|ZP_03107936.1| protein ExsB [Bacillus cereus NVH0597-99]
gi|196046480|ref|ZP_03113705.1| exsB protein [Bacillus cereus 03BB108]
gi|225863303|ref|YP_002748681.1| exsB protein [Bacillus cereus 03BB102]
gi|301052979|ref|YP_003791190.1| putative aluminum resistance protein [Bacillus anthracis CI]
gi|81396767|sp|Q6HLK6|QUEC_BACHK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81569836|sp|Q73BG0|QUEC_BACC1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81688847|sp|Q63E31|QUEC_BACCZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189039061|sp|A0RBG1|QUEC_BACAH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764304|sp|C1EM49|QUEC_BACC3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|42736452|gb|AAS40387.1| exsB protein [Bacillus cereus ATCC 10987]
gi|47556781|gb|EAL15112.1| exsB protein [Bacillus cereus G9241]
gi|49331555|gb|AAT62201.1| possible aluminum resistance protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51977465|gb|AAU19015.1| possible aluminum resistance protein [Bacillus cereus E33L]
gi|196022664|gb|EDX61346.1| exsB protein [Bacillus cereus 03BB108]
gi|196028427|gb|EDX67035.1| protein ExsB [Bacillus cereus NVH0597-99]
gi|225785866|gb|ACO26083.1| protein ExsB [Bacillus cereus 03BB102]
gi|300375148|gb|ADK04052.1| possible aluminum resistance protein [Bacillus cereus biovar
anthracis str. CI]
gi|324325457|gb|ADY20717.1| aluminum resistance protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 220
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 150/234 (64%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216
>gi|154685782|ref|YP_001420943.1| YkvJ [Bacillus amyloliquefaciens FZB42]
gi|154351633|gb|ABS73712.1| YkvJ [Bacillus amyloliquefaciens FZB42]
Length = 248
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 146/229 (63%), Gaps = 20/229 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR++ E++ + +K+
Sbjct: 31 KKEKAVVVFSGGQDSTTCLLWALQNFEEVETVTFHYNQRHQEEIDVAKSIAEKLG----- 85
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT ++ ++ +D LP TFVPGRN++FL FA+ LAY+
Sbjct: 86 -----VKNHLLDMSLLNQLAPNALTRDDIEIEAKDGELPTTFVPGRNLVFLSFASILAYQ 140
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 141 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 200
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC LR KG+ E+
Sbjct: 201 ELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYDEY 240
>gi|269103133|ref|ZP_06155830.1| queuosine Biosynthesis QueC ATPase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163031|gb|EEZ41527.1| queuosine Biosynthesis QueC ATPase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 234
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 147/234 (62%), Gaps = 21/234 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + +++
Sbjct: 2 RKAVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAQAITQEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVAAHKVMDVGLLNELAISSLTRDNIAVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 113 IGAEAVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRPLRIETPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++ + E++ TCY G G GC CP+C LR+ G ++ + +
Sbjct: 173 QYG---KLDYVREKTLTCYNGI------IGDGCGDCPSCDLRRAGLEDYLQHQE 217
>gi|229523532|ref|ZP_04412937.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae bv. albensis
VL426]
gi|229337113|gb|EEO02130.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae bv. albensis
VL426]
Length = 231
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LHLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|308173343|ref|YP_003920048.1| QueC [Bacillus amyloliquefaciens DSM 7]
gi|189039060|sp|A7Z3Y6|QUEC_BACA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|307606207|emb|CBI42578.1| QueC [Bacillus amyloliquefaciens DSM 7]
gi|328553730|gb|AEB24222.1| QueC [Bacillus amyloliquefaciens TA208]
Length = 219
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 146/229 (63%), Gaps = 20/229 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F+ VET++F Y QR++ E++ + +K+
Sbjct: 2 KKEKAVVVFSGGQDSTTCLLWALQNFEEVETVTFHYNQRHQEEIDVAKSIAEKLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT ++ ++ +D LP TFVPGRN++FL FA+ LAY+
Sbjct: 57 -----VKNHLLDMSLLNQLAPNALTRDDIEIEAKDGELPTTFVPGRNLVFLSFASILAYQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++G D V + TCY G GC CPAC LR KG+ E+
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYDEY 211
>gi|319652976|ref|ZP_08007081.1| aluminum resistance protein [Bacillus sp. 2_A_57_CT2]
gi|317395325|gb|EFV76058.1| aluminum resistance protein [Bacillus sp. 2_A_57_CT2]
Length = 219
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 95/226 (42%), Positives = 144/226 (63%), Gaps = 21/226 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K AL++FSGGQDS+TCL WA +RF+ VE ++F+Y QR+K+E+EC + K++
Sbjct: 2 KNDKALVVFSGGQDSTTCLFWAKERFEEVEAVTFNYNQRHKLEIECAQQIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAM--KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
HIL +++L ++ ++LT++ ++ LP+TFVPGRN++FL FA LA
Sbjct: 57 -----IRHHILDMSLLNQLAPNALTRDEIKVKDGEEGGLPSTFVPGRNLLFLSFAGVLAS 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETWKLA
Sbjct: 112 QINAKHIITGVCETDFSGYPDCRDIFIKSLNVTLNLSMDEQFVIHTPLMWLNKAETWKLA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
++ + ++ + E++ TCY G GC CPAC+LR+ G
Sbjct: 172 DEL---NALDYVREKTLTCYNGIP------ADGCGECPACHLRKNG 208
>gi|261252910|ref|ZP_05945483.1| queuosine Biosynthesis QueC ATPase [Vibrio orientalis CIP 102891]
gi|260936301|gb|EEX92290.1| queuosine Biosynthesis QueC ATPase [Vibrio orientalis CIP 102891]
Length = 232
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 147/234 (62%), Gaps = 21/234 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQSLAKEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVAAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +++ GVCETD+SGYPDCR+D ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGAQSVITGVCETDFSGYPDCRNDFVKAMNRALVQGMDRDLEIATPLMWLDKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D + L+ E++ TCY G G GC CP+C LR+ G + + +
Sbjct: 173 QY---DALQLVREKTLTCYNGI------IGDGCGDCPSCDLRKVGLNSYLDNRE 217
>gi|206977560|ref|ZP_03238454.1| exsB protein [Bacillus cereus H3081.97]
gi|217958916|ref|YP_002337464.1| exsB protein [Bacillus cereus AH187]
gi|222095073|ref|YP_002529133.1| aluminum resistance protein [Bacillus cereus Q1]
gi|254764306|sp|B7HK63|QUEC_BACC7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764307|sp|B9IUT0|QUEC_BACCQ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|206744278|gb|EDZ55691.1| exsB protein [Bacillus cereus H3081.97]
gi|217065877|gb|ACJ80127.1| exsB protein [Bacillus cereus AH187]
gi|221239131|gb|ACM11841.1| possible aluminum resistance protein [Bacillus cereus Q1]
Length = 220
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 150/234 (64%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAMEQFAEVEAVTFNYNQRHKLEIDCAAEIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216
>gi|229529558|ref|ZP_04418948.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae 12129(1)]
gi|229333332|gb|EEN98818.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae 12129(1)]
Length = 231
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LDLVCHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|157692044|ref|YP_001486506.1| transcriptional regulator [Bacillus pumilus SAFR-032]
gi|189038896|sp|A8FCH9|QUEC_BACP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157680802|gb|ABV61946.1| possible transcriptional regulator [Bacillus pumilus SAFR-032]
Length = 218
Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 148/231 (64%), Gaps = 20/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +F+ VET++F Y QR++ E++ + K+
Sbjct: 2 KNEKAVVVFSGGQDSTTCLLWALQQFEEVETVTFHYNQRHQEEIDVAKRIADKLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT ++ ++ ++ LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57 -----VKNHLLDMSLLNQLAPNALTRDDIDIEEKEGELPSTFVPGRNLVFLSFASILAYQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++ D V E+ TCY G GC CPAC LR+KG+ + E
Sbjct: 172 ELNALDFVK---NETLTCYNGI------ISDGCGECPACKLRKKGYDTYME 213
>gi|194014818|ref|ZP_03053435.1| ExsB protein [Bacillus pumilus ATCC 7061]
gi|194013844|gb|EDW23409.1| ExsB protein [Bacillus pumilus ATCC 7061]
Length = 218
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 148/231 (64%), Gaps = 20/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +F+ VET++F Y QR++ E++ + K+
Sbjct: 2 KNEKAVVVFSGGQDSTTCLLWALQQFEEVETVTFHYNQRHQEEIDVAKRIADKLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++H+L +++L ++ ++LT ++ ++ ++ LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57 -----VKNHLLDMSLLNQLAPNALTRDDIDIEEKEGELPSTFVPGRNLVFLSFASILAYQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETWKLA
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++ D V E+ TCY G GC CPAC LR+KG+ + E
Sbjct: 172 ELNALDFVK---NETLTCYNGI------MSDGCGECPACKLRKKGYDTYME 213
>gi|288905499|ref|YP_003430721.1| ExsB like protein [Streptococcus gallolyticus UCN34]
gi|288732225|emb|CBI13790.1| ExsB like protein [Streptococcus gallolyticus UCN34]
Length = 217
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 152/231 (65%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL +D VET++F+YGQR+ +E+E +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIEVAKHIA--------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++H+L +++LG ++ ++LT+++ ++ D++LPNTFV GRN +FL FAA LA RL
Sbjct: 53 -AEQGVKNHLLDMSLLGQLTENALTRDIVIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M+ + + TPLMWL K ETW+LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELANQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + E + TCY G + G GC CPAC LRQ G ++ K
Sbjct: 172 LGKF---DYVRENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 213
>gi|260778538|ref|ZP_05887430.1| queuosine Biosynthesis QueC ATPase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260604702|gb|EEX30997.1| queuosine Biosynthesis QueC ATPase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 231
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 149/234 (63%), Gaps = 21/234 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKNYDEVHAITFDYGQRHKLEIEVAQDLAKEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ ++ + TPLMWL K ETW LA
Sbjct: 113 IGAQAVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDRNLDIVTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D + L+ E++ TCY G G GC CPAC LR+ G ++ + +
Sbjct: 173 QY---DALQLVREKTLTCYNGI------IGDGCGDCPACDLRKAGLNDYIDNRE 217
>gi|229114878|ref|ZP_04244291.1| hypothetical protein bcere0017_11750 [Bacillus cereus Rock1-3]
gi|228668570|gb|EEL23999.1| hypothetical protein bcere0017_11750 [Bacillus cereus Rock1-3]
Length = 223
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 91/240 (37%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++ +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K +
Sbjct: 109 AVLAKQVEARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAD 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|157962170|ref|YP_001502204.1| exsB protein [Shewanella pealeana ATCC 700345]
gi|189029314|sp|A8H532|QUEC_SHEPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157847170|gb|ABV87669.1| exsB protein [Shewanella pealeana ATCC 700345]
Length = 227
Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 147/233 (63%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL FD V ++FDYGQR++ E+E + K+
Sbjct: 3 KAVVVFSGGQDSTTCLIQALQHFDEVHGITFDYGQRHREEIEIAKTLASKL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L ++ + +L +++ S+LT++ V+ + DN LPNTFVPGRNI+FL A AY+L
Sbjct: 54 KLASHKVMDVTLLNELAISALTRDSIPVSNDLMDNGLPNTFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR+D ++A++ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 114 GADVVITGVCETDFSGYPDCRNDFVKAMQAALEQGMDKKLTIQTPLMWLDKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++LI +E+ TCY G + G GC +CPAC LR++G E+ +
Sbjct: 174 Y---QSLDLIRDETLTCYNGIK------GDGCGTCPACLLRKRGLEEYLADKE 217
>gi|153212723|ref|ZP_01948380.1| exsB protein [Vibrio cholerae 1587]
gi|124116373|gb|EAY35193.1| exsB protein [Vibrio cholerae 1587]
Length = 231
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 145/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKTVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T I+ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGATTIITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|167623865|ref|YP_001674159.1| exsB protein [Shewanella halifaxensis HAW-EB4]
gi|189029313|sp|B0TSC0|QUEC_SHEHH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167353887|gb|ABZ76500.1| exsB protein [Shewanella halifaxensis HAW-EB4]
Length = 229
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 147/233 (63%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL +FD V ++FDYGQR++ E+E + +
Sbjct: 3 KAVVVFSGGQDSTTCLIQALQQFDEVHGITFDYGQRHREEIEIAKELATNL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L ++ + +L +++ S+LT++ V+ ++ DN LPNTFVPGRNI+FL A AY+L
Sbjct: 54 KLASHKVMDVTLLNELAISALTRDSIPVSNELMDNGLPNTFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR+D ++A++ A+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 114 GADTVITGVCETDFSGYPDCRNDFVKAMQAALEQGMDKKLTIQTPLMWLDKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D + L+ E+ TCY G + G GC +CPAC LR++G E+ +
Sbjct: 174 ---FDSLELVRNETLTCYNGIK------GDGCGTCPACLLRKRGLEEYLADKE 217
>gi|317129079|ref|YP_004095361.1| exsB protein [Bacillus cellulosilyticus DSM 2522]
gi|315474027|gb|ADU30630.1| exsB protein [Bacillus cellulosilyticus DSM 2522]
Length = 218
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 97/238 (40%), Positives = 147/238 (61%), Gaps = 22/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K +++FSGGQDS+TCL WAL ++D VE ++FDY QR+ E++ + ++
Sbjct: 1 MNKN-KVIVVFSGGQDSTTCLFWALKKYDEVEAVTFDYHQRHSEEIQVAKEITSELK--- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAM--KIQDNNLPNTFVPGRNIIFLVFAATL 122
+ HIL +++L ++ S+LT+ + + LP+TFVPGRN+IFL FA L
Sbjct: 57 -------VKHHILDMSLLNQLAPSALTREEIVVKDGEAGGLPSTFVPGRNLIFLSFATIL 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++G +IV GVCETD+SGYPDCR I+++ ++NL M+ +HTPLMWL K ETWK
Sbjct: 110 ARQIGAKHIVTGVCETDFSGYPDCRDVFIKSLNVSLNLSMDDQFVIHTPLMWLDKSETWK 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LA D+ + + +++ TCY G R G GC CPAC LR+KG ++ + ++
Sbjct: 170 LADDLHA---LQYVRDKTLTCYNGIR------GDGCGDCPACKLRKKGLEKYLIEKEN 218
>gi|229084430|ref|ZP_04216710.1| hypothetical protein bcere0022_10700 [Bacillus cereus Rock3-44]
gi|228698970|gb|EEL51675.1| hypothetical protein bcere0022_10700 [Bacillus cereus Rock3-44]
Length = 220
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 93/234 (39%), Positives = 149/234 (63%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + K++
Sbjct: 2 KKEKAVVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAADIAKELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA +
Sbjct: 57 -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVEGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWKL+
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G D V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 172 ELGAFDFVR---EKTLTCYNGI------IGDGCGECPACKLRKAGLDTYLQERE 216
>gi|323491405|ref|ZP_08096590.1| queuosine biosynthesis protein QueC [Vibrio brasiliensis LMG 20546]
gi|323314531|gb|EGA67610.1| queuosine biosynthesis protein QueC [Vibrio brasiliensis LMG 20546]
Length = 228
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 95/233 (40%), Positives = 149/233 (63%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL ++D V ++FDYGQR+K+E+E + K++
Sbjct: 3 KAVVVFSGGQDSTTCLVQALKQYDEVHAITFDYGQRHKLEIEVAQSLAKEL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +++L +++ SSLT++ V+ +Q+N LPN+FVPGRNI+FL A AY++
Sbjct: 54 GVKAHKVMDVSLLNELAISSLTRDDIPVSHDLQENGLPNSFVPGRNILFLTLAGIYAYQI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 114 GAKTVITGVCETDFSGYPDCRNDFVKAMNSALEQGMDYQLEIATPLMWLNKAETWALADQ 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D + L+ E++ TCY G G GC CP+C LR+ G ++ + +
Sbjct: 174 Y---DALQLVREKTLTCYNGV------IGDGCGDCPSCELRKVGLNDYLDNRE 217
>gi|182416846|ref|ZP_02948232.1| ExsB protein [Clostridium butyricum 5521]
gi|237669043|ref|ZP_04529027.1| ExsB protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379308|gb|EDT76807.1| ExsB protein [Clostridium butyricum 5521]
gi|237657391|gb|EEP54947.1| ExsB protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 218
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 145/235 (61%), Gaps = 21/235 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL WAL++FD V ++F+Y Q++K+E+EC + K++
Sbjct: 1 MNKKAVVVFSGGQDSTTCLFWALEQFDEVIAVTFNYNQKHKLEIECAKSIAKELG----- 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAY 124
E HIL + +L ++ ++LT ++ +K+ +N P+TFV GRN++FL FA LA
Sbjct: 56 -----VEHHILDMGLLNQLAPNALTRDDIEIKMGENGEPPSTFVEGRNMLFLTFAGVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G +IV GVCETD+SGYPDCR ++++ +NL M+ VHTPLMW+ K ETWK+A
Sbjct: 111 VKGAKHIVTGVCETDFSGYPDCRDVFVKSLNVTMNLAMDYEFVVHTPLMWIDKAETWKMA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D G + + E++ TCY G G GC CPAC LR++G + E +
Sbjct: 171 DDFG---KLEYVREKTLTCYNGI------IGDGCGKCPACILRKRGLDNYLESKK 216
>gi|157375185|ref|YP_001473785.1| ExsB protein [Shewanella sediminis HAW-EB3]
gi|189029565|sp|A8FUY4|QUEC_SHESH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157317559|gb|ABV36657.1| ExsB protein [Shewanella sediminis HAW-EB3]
Length = 232
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 150/238 (63%), Gaps = 21/238 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL AL+++D V ++FDYGQR+ E+E + +++
Sbjct: 1 MSKVSKAVVVFSGGQDSTTCLIQALNQYDEVHGITFDYGQRHSQEIEVARSLGQRL---- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L IL +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A
Sbjct: 57 -----GLVSHKILDVSMLNELAISALTRDSIEVSNELMENGLPNTFVPGRNILFLTLAGI 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
AY+LG +++ GVCETD+SGYPDCR+D ++ +E+A+N GM+ + TPLMWL K ETW
Sbjct: 112 YAYQLGADSVITGVCETDFSGYPDCRNDFVKTMESALNQGMDRQCKIVTPLMWLNKAETW 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA + L+ +E+ TCY G G GC +CPAC LRQ G ++ +
Sbjct: 172 ALADQY---KSLELVRDETLTCYNGI------IGNGCGTCPACLLRQSGLEDYSNNRE 220
>gi|73663317|ref|YP_302098.1| hypothetical protein SSP2008 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|110816267|sp|Q49VQ7|QUEC_STAS1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|72495832|dbj|BAE19153.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 223
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 145/238 (60%), Gaps = 20/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M++ A+++FSGGQDS+TCL WA F+ VE ++F YGQR+ E+E V K+I
Sbjct: 1 MSEQTLDNNKAIVVFSGGQDSTTCLFWAKKHFESVELVTFAYGQRHDTEIE----VAKQI 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + + H+L +++L ++ ++LT+ ++ +++ D+ +PNTFVP RN++FL FA
Sbjct: 57 AD------EQGVKHHLLDMSLLSQLTPNALTQHDLDIEVGDDGIPNTFVPARNLLFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LAY+ +I+ GVCETD+SGYPDCR ++++ ++L M+ +HTPLMWL K
Sbjct: 111 GALAYQTNAKHIITGVCETDFSGYPDCRDSFVKSMNVTLSLSMDKDFVIHTPLMWLDKKA 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
TW L+ D+G +++ I + TCY G G GC CPAC LR G + +
Sbjct: 171 TWALSDDLG---VLDYIRYNTLTCYNGV------IGDGCGECPACQLRANGLNAYLAE 219
>gi|229102039|ref|ZP_04232752.1| hypothetical protein bcere0019_12040 [Bacillus cereus Rock3-28]
gi|228681426|gb|EEL35590.1| hypothetical protein bcere0019_12040 [Bacillus cereus Rock3-28]
Length = 223
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 91/240 (37%), Positives = 154/240 (64%), Gaps = 22/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEIIHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA ++ +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K +
Sbjct: 109 AVLAKQVEARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAD 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKL+ ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219
>gi|52079921|ref|YP_078712.1| queuosine (Q) synthesis protein QueC [Bacillus licheniformis ATCC
14580]
gi|52785292|ref|YP_091121.1| YkvJ [Bacillus licheniformis ATCC 14580]
gi|319646262|ref|ZP_08000492.1| queuosine biosynthesis protein queC [Bacillus sp. BT1B_CT2]
gi|81385781|sp|Q65KI6|QUEC_BACLD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|52003132|gb|AAU23074.1| Queuosine (Q) synthesis protein QueC [Bacillus licheniformis ATCC
14580]
gi|52347794|gb|AAU40428.1| YkvJ [Bacillus licheniformis ATCC 14580]
gi|317392012|gb|EFV72809.1| queuosine biosynthesis protein queC [Bacillus sp. BT1B_CT2]
Length = 219
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 147/235 (62%), Gaps = 20/235 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +F VE ++F Y QR+K E+E + K+
Sbjct: 2 KQEKAIVVFSGGQDSTTCLLWALRQFQEVEAVTFQYNQRHKQEIEVAKKIAAKLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ H+L + +L ++ ++LT ++ ++ ++ LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57 -----VKHHLLDMELLNQLAPNALTRDDIEIEAKEGELPSTFVPGRNLVFLSFASILAYQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR + +++ +NL ME +HTPLMWL K ETW+LA
Sbjct: 112 VGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMERPFVIHTPLMWLNKAETWELAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
++ D ++ + E+ TCY G GC CPAC LR G+ E+ + ++
Sbjct: 172 EL---DALDFVKNETLTCYNGI------IADGCGECPACKLRANGYNEYMKMKKE 217
>gi|150017399|ref|YP_001309653.1| exsB protein [Clostridium beijerinckii NCIMB 8052]
gi|189038906|sp|A6LWG7|QUEC_CLOB8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|149903864|gb|ABR34697.1| exsB protein [Clostridium beijerinckii NCIMB 8052]
Length = 217
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 100/236 (42%), Positives = 147/236 (62%), Gaps = 21/236 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A+++FSGGQDS+TCL WAL FD V ++FDY Q+++ E+EC + K++
Sbjct: 1 MSNKAVVVFSGGQDSTTCLFWALKEFDEVIAVTFDYNQKHRKEIECATSIAKELG----- 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAY 124
E HIL + +L ++ ++LT+ ++ +K +N LP+TFV GRN++FL FA LA
Sbjct: 56 -----IEHHILDMGLLNQLAPNALTRNDIEIKAGENGSLPSTFVEGRNMLFLTFAGVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G +IV GVCETD+SGYPDCR I+++ +NL M+ + VHTPLMW+ K ETWK+A
Sbjct: 111 VKGAKHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYNFVVHTPLMWIDKAETWKMA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
D G ++ I E++ TCY G G GC CPAC LR+ G ++ E ++
Sbjct: 171 DDFG---KLDYIREKTLTCYKGI------VGDGCGECPACKLRKNGLDKYLESKKN 217
>gi|228477584|ref|ZP_04062217.1| ExsB protein [Streptococcus salivarius SK126]
gi|228250728|gb|EEK09926.1| ExsB protein [Streptococcus salivarius SK126]
Length = 217
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 147/234 (62%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E + +
Sbjct: 2 KRRSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAQ-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQKG ++ + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGTGCGECPACHLRQKGLEKYLAERGE 216
>gi|121588012|ref|ZP_01677764.1| exsB protein [Vibrio cholerae 2740-80]
gi|121547753|gb|EAX57844.1| exsB protein [Vibrio cholerae 2740-80]
Length = 231
Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats.
Identities = 96/233 (41%), Positives = 145/233 (62%), Gaps = 21/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDY QR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYSQRHKLEIEVAQQLAKQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G T ++ GVCETD+SGYPDCR + ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++L+ ++ TCY G G GC CPAC LRQ G + +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAYLDNR 216
>gi|312278213|gb|ADQ62870.1| Putative ATPase, confers aluminum resistance [Streptococcus
thermophilus ND03]
Length = 217
Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 147/234 (62%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E + +
Sbjct: 2 KRQSALIVFSGGQDSTTCLFWALKHYEIVELVTFAYGQRHSLEIEVAKEIAQ-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIDIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQKG ++ + D
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGTGCGDCPACHLRQKGLEKYLAEKGD 216
>gi|312884428|ref|ZP_07744132.1| queuosine biosynthesis protein QueC [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367740|gb|EFP95288.1| queuosine biosynthesis protein QueC [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 231
Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 150/235 (63%), Gaps = 21/235 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ ++D V T++FDYGQR+++E+E + ++
Sbjct: 2 KKAVVVFSGGQDSTTCLMQAIKQYDEVHTITFDYGQRHRLEIEVARSIADEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L D++ SSLT++ V+ +Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVTLLNDLAASSLTRDNIAVSNDVQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +++ GVCETD+SGYPDCR+D ++A+ A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 VGAHDLITGVCETDFSGYPDCRNDFVQAMGKALEQGMDRQLNIITPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G ++LI +++ TCY G G GC CP+C+LR KG ++ +
Sbjct: 173 SLGA---LDLIKDKTLTCYNGI------IGEGCGDCPSCHLRTKGLDDYLSNKDN 218
>gi|322373084|ref|ZP_08047620.1| ExsB protein [Streptococcus sp. C150]
gi|321278126|gb|EFX55195.1| ExsB protein [Streptococcus sp. C150]
Length = 217
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 146/233 (62%), Gaps = 19/233 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E + K
Sbjct: 3 RQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAK--------- 53
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA + G
Sbjct: 54 -EQGLKHHVLDMSLLGQITENALTSDIEIESEEGEVPNTFVDGRNHLFLSFAAVLAKQRG 112
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IT+IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA +
Sbjct: 113 ITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQL 172
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
G + + E++ TCY G G GC CPAC+LRQ+G ++ + +
Sbjct: 173 GAF---DYVREKTLTCYNGI------IGTGCGECPACHLRQRGLEKYLAERGE 216
>gi|304320028|ref|YP_003853671.1| hypothetical protein PB2503_02262 [Parvularcula bermudensis
HTCC2503]
gi|303298931|gb|ADM08530.1| hypothetical protein PB2503_02262 [Parvularcula bermudensis
HTCC2503]
Length = 243
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 117/228 (51%), Positives = 163/228 (71%), Gaps = 2/228 (0%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+L SGGQDS+TCL+WAL R+ VETL FDYGQR++VEL+ R VR + +
Sbjct: 18 ALVLLSGGQDSATCLAWALGRYRVVETLGFDYGQRHRVELDARERVRAWWAD--RPEGGA 75
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG DH LP+ G+I +++T V +++ N LP TFVPGRN+ FLVFA LA R G++
Sbjct: 76 LGADHRLPVPAFGEIGDTAMTAEVEIEMAANGLPTTFVPGRNLAFLVFAGALALRRGLSV 135
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V G+C+TD +GYPDCR +TI+A A++LG++ ++V TPLM+ K ETW LAQ++GG
Sbjct: 136 VVGGMCQTDAAGYPDCRWETIKAQADALSLGIDPSLSVATPLMFRSKAETWALAQELGGD 195
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
DLV++I+E++HTCY G R+ R+ WGYGC CPAC+ R +GW ++E
Sbjct: 196 DLVSMIVEDTHTCYRGDREHRHPWGYGCGDCPACHERARGWATWQESR 243
>gi|310639675|ref|YP_003944433.1| atpase, confers aluminum resistance [Paenibacillus polymyxa SC2]
gi|309244625|gb|ADO54192.1| Putative ATPase, confers aluminum resistance [Paenibacillus
polymyxa SC2]
Length = 219
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/237 (41%), Positives = 150/237 (63%), Gaps = 23/237 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
AL++FSGGQDS+TCL WAL +D V+T+SF YGQR+K+ELEC + K++
Sbjct: 1 MNKKALVVFSGGQDSTTCLLWALKEYDEVQTVSFQYGQRHKLELECASEIAKELN----- 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLA 123
+ H+L L +L ++ ++LT+ ++I+ + LPNTFV GRN++FL FAA LA
Sbjct: 56 -----VKHHVLDLNLLNQLAPNALTRE-DIEIEAGSEGALPNTFVDGRNMLFLSFAAILA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+LG +I+ GVC+TD+SGYPDCR ++++ +NL M+ + +HTPLMWL K +TW+L
Sbjct: 110 KQLGYYHIITGVCQTDFSGYPDCRDVFVKSLNVTLNLSMDYNFVIHTPLMWLNKKQTWEL 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A +G ++ + ++ TCY G G GC CPAC LR+ G ++ ++ +
Sbjct: 170 ADQLGH---LDFVRTKTLTCYNGI------IGDGCGECPACLLRRAGLEQYLQERGN 217
>gi|84387076|ref|ZP_00990099.1| predicted ATPase [Vibrio splendidus 12B01]
gi|84378151|gb|EAP95011.1| predicted ATPase [Vibrio splendidus 12B01]
Length = 231
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 144/229 (62%), Gaps = 21/229 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHRLEIEVAESLSKEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGANTVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDKPLDIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ L+ ++ TCY G G GC CPAC LR+ G ++
Sbjct: 173 QYSA---LELVRNKTLTCYNGI------VGDGCGDCPACELRKVGLNDY 212
>gi|319891711|ref|YP_004148586.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161407|gb|ADV04950.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus pseudintermedius
HKU10-03]
Length = 222
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 145/238 (60%), Gaps = 20/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M++++ AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + +
Sbjct: 1 MSEVLN-NEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFEYGQRHVKEIEVAKEIAE-- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
D + H+L +A+L ++ ++LT + N++PNTFVP RN++FL FA
Sbjct: 58 --------DQGLKHHVLDMALLSQLTPNALTSHDMTIESHNDVPNTFVPARNLLFLSFAG 109
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAY++G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ET
Sbjct: 110 ALAYQIGAKHLITGVCETDFSGYPDCRDSFIKSMNVTLNLAMDRDFVIHTPLMWLNKKET 169
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
W L+ D+G +++ + + + TCY G GC CPAC LRQ+G ++ +
Sbjct: 170 WALSDDLG---VLDYVRDRTLTCYNGI------IAEGCGECPACQLRQRGLEQYLAER 218
>gi|169828574|ref|YP_001698732.1| queuosine biosynthesis protein [Lysinibacillus sphaericus C3-41]
gi|254764358|sp|B1HPF6|QUEC_LYSSC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|168993062|gb|ACA40602.1| Queuosine biosynthesis protein [Lysinibacillus sphaericus C3-41]
Length = 219
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 147/237 (62%), Gaps = 23/237 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +RF +E ++F+YGQR+++E+EC + +++
Sbjct: 2 KQEKAIVVFSGGQDSTTCLFWAKERFAEIEAVTFNYGQRHRLEIECAEQIAEELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLA 123
+ HIL + +L ++ ++LT+ +K++D LP+TFVPGRN++FL FA LA
Sbjct: 57 -----IKHHILDMTLLNQLAPNALTRQ-DIKVEDGQNGELPSTFVPGRNLLFLSFAGVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++G +IV GVCETD+SGYPDCR I+++ +NL M++ + TPLMWL K +TW+L
Sbjct: 111 SQIGAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSMDNSFVIDTPLMWLNKAQTWEL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A G + V E + TCY G GC CPAC LR+KG E+ ++
Sbjct: 171 ADQFGALEFVR---ERTLTCYNGV------IADGCGECPACKLRKKGLDEYLSYRKE 218
>gi|89073465|ref|ZP_01159988.1| putative exsB protein [Photobacterium sp. SKA34]
gi|89050729|gb|EAR56210.1| putative exsB protein [Photobacterium sp. SKA34]
Length = 231
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 92/230 (40%), Positives = 145/230 (63%), Gaps = 21/230 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K +
Sbjct: 3 KAVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAEAIAKDL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++
Sbjct: 54 GVTAHKVMDVGLLNELAISSLTRDNIAVSHELQENGLPNSFVPGRNILFLTLAGIYAYQI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + ++++ ++ LGM+ +T+ TPLMWL K ETW LA
Sbjct: 114 GAETVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRPLTIATPLMWLNKAETWALADQ 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++ + E++ TCY G G GC CP+C LR+ G ++ +
Sbjct: 174 Y---QKLDYVREKTLTCYNGI------IGDGCGDCPSCDLRRAGLNDYLD 214
>gi|312863345|ref|ZP_07723583.1| protein ExsB [Streptococcus vestibularis F0396]
gi|311100881|gb|EFQ59086.1| protein ExsB [Streptococcus vestibularis F0396]
Length = 217
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 147/234 (62%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E + +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAQ-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQKG ++ + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGTGCGDCPACHLRQKGLEKYLAERGE 216
>gi|322516973|ref|ZP_08069863.1| transcription regulator ExsB [Streptococcus vestibularis ATCC
49124]
gi|322124456|gb|EFX95951.1| transcription regulator ExsB [Streptococcus vestibularis ATCC
49124]
Length = 217
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 147/234 (62%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E + +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAQ-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDLEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+I+ GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GITDIITGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQKG ++ + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGTGCGECPACHLRQKGLEKYLAERGE 216
>gi|251798293|ref|YP_003013024.1| exsB protein [Paenibacillus sp. JDR-2]
gi|247545919|gb|ACT02938.1| exsB protein [Paenibacillus sp. JDR-2]
Length = 221
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 95/231 (41%), Positives = 142/231 (61%), Gaps = 20/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL+R++ VE ++F+YGQR+ +ELEC + +++
Sbjct: 2 KKGKAVVVFSGGQDSTTCLFWALERYEEVEAVTFNYGQRHALELECAAQIAEELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H+L +++L ++ ++LT+ ++ ++ Q+ LP TFV GRN++FL FAA LA +
Sbjct: 57 -----VRHHVLDMSLLNQLAPNALTRPDIEIEQQEGGLPTTFVDGRNLLFLSFAAVLAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW LA
Sbjct: 112 IGARAIVTGVCETDFSGYPDCRDIFIKSLNVTLNLSMDYPFVIETPLMWLDKAETWGLAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G + V ++ TCY G GC CPAC LR +G +
Sbjct: 172 QLGAFEYVR---TKTLTCYNGV------IADGCGECPACKLRSQGLNRYLA 213
>gi|288556799|ref|YP_003428734.1| Queuosine biosynthesis protein QueC [Bacillus pseudofirmus OF4]
gi|288547959|gb|ADC51842.1| Queuosine biosynthesis protein QueC [Bacillus pseudofirmus OF4]
Length = 222
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 143/235 (60%), Gaps = 21/235 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F V T++FDYGQR+ E+EC + ++
Sbjct: 2 KQDKAVVVFSGGQDSTTCLFWALKEFKEVATVTFDYGQRHSKEIECARKIADELGVSF-- 59
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAY 124
H+L + +L +S ++LT+ ++ ++ D+ LP+TFV GRN++FL FAA
Sbjct: 60 --------HVLDMGLLNQLSPNALTRADIEVEAGDDGELPSTFVEGRNLLFLSFAAIYGK 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLMWL K +TWKLA
Sbjct: 112 QIGAKHIITGVCETDFSGYPDCRDIFVKSLNVTLNLSMDDQFVIHTPLMWLNKEQTWKLA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D+G V E++ TCY G G GC CPAC LR+KG ++ +
Sbjct: 172 DDLGALSFVR---EKTLTCYNGI------IGDGCGECPACVLRKKGLDDYLASTE 217
>gi|86145929|ref|ZP_01064257.1| predicted ATPase [Vibrio sp. MED222]
gi|85836384|gb|EAQ54514.1| predicted ATPase [Vibrio sp. MED222]
Length = 231
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 144/234 (61%), Gaps = 21/234 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E + K +
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHRLEIEVAESLSKDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGANTVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDKPLDIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ L+ ++ TCY G G GC CPAC LR+ G ++ Q
Sbjct: 173 QYSA---LELVRNKTLTCYNGI------IGDGCGDCPACELRKIGLSDYLGDRQ 217
>gi|323465119|gb|ADX77272.1| queuosine biosynthesis protein QueC [Staphylococcus
pseudintermedius ED99]
Length = 222
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 145/238 (60%), Gaps = 20/238 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M++++ AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E + +
Sbjct: 1 MSEVLN-NEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFEYGQRHAKEIEVAKEIAE-- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
D + H+L +A+L ++ ++LT + N++PNTFVP RN++FL FA
Sbjct: 58 --------DQGLKHHVLDMALLSQLTPNALTSHDMTIDSHNDVPNTFVPARNLLFLSFAG 109
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LAY++G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ET
Sbjct: 110 ALAYQIGAKHLITGVCETDFSGYPDCRDSFIKSMNVTLNLAMDRDFVIHTPLMWLNKKET 169
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
W L+ D+G +++ + + + TCY G GC CPAC LRQ+G ++ +
Sbjct: 170 WALSDDLG---VLDYVRDRTLTCYNGI------IAEGCGECPACQLRQRGLNQYLAER 218
>gi|330445417|ref|ZP_08309069.1| 7-cyano-7-deazaguanine synthase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489608|dbj|GAA03566.1| 7-cyano-7-deazaguanine synthase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 232
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 145/233 (62%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K +
Sbjct: 3 KAVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAEAIAKDL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL A AY++
Sbjct: 54 GVTAHKVMDVGLLNELAISSLTRDNIAVSHELQANGLPNSFVPGRNILFLTLAGIYAYQI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 114 GAETVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRQLKIDTPLMWLNKAETWALADQ 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++ + E++ TCY G G GC +CP+C LR+ G ++ + +
Sbjct: 174 Y---SKLDYVREKTLTCYNGI------IGDGCGNCPSCDLRRAGLNDYLDHKE 217
>gi|55820874|ref|YP_139316.1| hypothetical protein stu0825 [Streptococcus thermophilus LMG 18311]
gi|55822790|ref|YP_141231.1| hypothetical protein str0825 [Streptococcus thermophilus CNRZ1066]
gi|81559500|sp|Q5M064|QUEC_STRT1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81560693|sp|Q5M4S5|QUEC_STRT2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|55736859|gb|AAV60501.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55738775|gb|AAV62416.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 217
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 145/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E + +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAQ-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ + +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIEIEAEKGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GIIDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQKG ++ + D
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGTGCGDCPACHLRQKGLEKYLAEKGD 216
>gi|170726898|ref|YP_001760924.1| exsB protein [Shewanella woodyi ATCC 51908]
gi|169812245|gb|ACA86829.1| exsB protein [Shewanella woodyi ATCC 51908]
Length = 233
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 103/242 (42%), Positives = 155/242 (64%), Gaps = 24/242 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + +++
Sbjct: 1 MSKAVSKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHRQEIEVAETLGQQL--- 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L L +++L +++ S+LT++ V+ ++ DN LPNTFVPGRNI+FL A
Sbjct: 58 ------GLKSHKTLDVSMLNELAISALTRDSIQVSNELMDNGLPNTFVPGRNILFLTLAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
AY+LG ++ GVCETD+SGYPDCR+D ++A+++A+ GM+ +T+ TPLMWL K ET
Sbjct: 112 IFAYQLGADTVITGVCETDFSGYPDCRNDFVKAMQSALEQGMDRKLTLSTPLMWLNKAET 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF---KEK 237
W LA ++L+ +E+ TCY G G GC +CPAC LRQKG ++ KE+
Sbjct: 172 WALADKY---HSLDLVRDETLTCYNGI------VGTGCGTCPACLLRQKGLDDYCNNKEQ 222
Query: 238 YQ 239
Q
Sbjct: 223 VQ 224
>gi|90579979|ref|ZP_01235787.1| putative exsB protein [Vibrio angustum S14]
gi|90438864|gb|EAS64047.1| putative exsB protein [Vibrio angustum S14]
Length = 231
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 92/230 (40%), Positives = 145/230 (63%), Gaps = 21/230 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K +
Sbjct: 3 KAVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAEAIAKDL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY++
Sbjct: 54 GVTAHKVMDVGLLNELAISSLTRDNIAVSHELQENGLPNSFVPGRNILFLTLAGIYAYQI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + ++++ ++ LGM+ +T+ TPLMWL K ETW LA
Sbjct: 114 GAETVITGVCETDFSGYPDCRDEFVKSLNQSLILGMDRPLTIATPLMWLNKAETWALADQ 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++ + E++ TCY G G GC CP+C LR+ G ++ +
Sbjct: 174 Y---QKLDYVREKTLTCYNGI------IGDGCGDCPSCDLRRAGLNDYLD 214
>gi|116627683|ref|YP_820302.1| PP-loop superfamily ATPase [Streptococcus thermophilus LMD-9]
gi|122267720|sp|Q03L16|QUEC_STRTD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|116100960|gb|ABJ66106.1| Predicted PP-loop superfamily ATPase [Streptococcus thermophilus
LMD-9]
Length = 217
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 146/234 (62%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ +E+E + +
Sbjct: 2 KRQSALIVFSGGQDSTTCLFWALKHYEIVELVTFAYGQRHSLEIEVAKEIAQ-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + H+L +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGLKHHVLDMSLLGQITENALTSDIDIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ETW LA
Sbjct: 112 GIIDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQKG ++ + D
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGTGCGDCPACHLRQKGLEKYLAEKGD 216
>gi|299541809|ref|ZP_07052132.1| queuosine biosynthesis protein [Lysinibacillus fusiformis ZC1]
gi|298725547|gb|EFI66188.1| queuosine biosynthesis protein [Lysinibacillus fusiformis ZC1]
Length = 219
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 149/236 (63%), Gaps = 21/236 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +RF+ +E ++FDYGQR+++E++C + +++
Sbjct: 2 KKEKAIVVFSGGQDSTTCLFWAKERFEEIEAVTFDYGQRHRLEIDCAKVITEELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAY 124
+ HIL +++L ++ ++LT +++ +K +N LP+TFVPGRN++FL FA LA
Sbjct: 57 -----IKHHILDMSLLNQLAPNALTRQDIKVKDGENGELPSTFVPGRNLLFLSFAGVLAS 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G +IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K +TW+LA
Sbjct: 112 QVGAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSMDDSFVIDTPLMWLNKAQTWELA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + V E + TCY G GC CPAC LR KG E+ ++
Sbjct: 172 DQLGALEFVR---ERTLTCYNGV------IADGCGECPACKLRNKGLDEYLSYRKE 218
>gi|222150715|ref|YP_002559868.1| ExsB protein [Macrococcus caseolyticus JCSC5402]
gi|222119837|dbj|BAH17172.1| ExsB protein [Macrococcus caseolyticus JCSC5402]
Length = 222
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 93/232 (40%), Positives = 151/232 (65%), Gaps = 20/232 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ AL++FSGGQDS+TC+ +A+ +D VE ++F+YGQR+ +E++ + K+I E
Sbjct: 6 SNKALVVFSGGQDSTTCMFYAMHHYDEVELVTFNYGQRHALEID----IAKQIAE----- 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + H+L +++L +S ++LT + + I++N++PNTFVP RN++F+ FAA LAY++
Sbjct: 57 -EQGLKHHVLDMSLLSQLSPNALTHH-DLTIENNDIPNTFVPARNLLFMSFAAALAYQIN 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+I+ GVCETD+SGYPDCR + I+++ INL M+ + +HTPLMWL K ETW LA +
Sbjct: 115 AKHIITGVCETDFSGYPDCRDNFIKSLNVTINLSMDLNFEIHTPLMWLDKKETWALADTL 174
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++ I ++ TCY G GC CP+C LR G ++ ++ +
Sbjct: 175 GQ---LDYIRNKTLTCYNGIP------ADGCGECPSCKLRNNGLNQYLQEKE 217
>gi|329955670|ref|ZP_08296578.1| protein ExsB [Bacteroides clarus YIT 12056]
gi|328526073|gb|EGF53097.1| protein ExsB [Bacteroides clarus YIT 12056]
Length = 226
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 137/232 (59%), Gaps = 22/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 3 KEAALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHRKEVELAREIARKAE------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + + +PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFEVMDVSFIGRLGHNSLTDPGMVMDKEKPADGVPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 EKGIDHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDGQFVLHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G +++LI E+ TCY G G GC CPAC LR++G ++
Sbjct: 173 DELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGLEKYLA 215
>gi|329925236|ref|ZP_08280179.1| protein ExsB [Paenibacillus sp. HGF5]
gi|328940069|gb|EGG36402.1| protein ExsB [Paenibacillus sp. HGF5]
Length = 225
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 146/235 (62%), Gaps = 19/235 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA +RF VET++FDYGQR+K+E+EC + K
Sbjct: 1 MLKNEKAVVVFSGGQDSTTCLFWAKERFAEVETVTFDYGQRHKLEIECAAQIAK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ + +L +++L ++ ++LT++ + + LP TFV GRN++FL FAA LA
Sbjct: 55 ----EQGVKQTVLDMSLLNQLAPNALTRSDIEIAEGDGLPTTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW+LA
Sbjct: 111 GVGAKHLITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKSETWELA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ + + + + + TCY G + G GC CPAC LR+ G ++ ++
Sbjct: 171 DQM---NALEYVRDHTLTCYNGIK------GDGCGECPACKLRKAGLDKYMQRRN 216
>gi|261405279|ref|YP_003241520.1| exsB protein [Paenibacillus sp. Y412MC10]
gi|261281742|gb|ACX63713.1| exsB protein [Paenibacillus sp. Y412MC10]
Length = 225
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 146/234 (62%), Gaps = 19/234 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA +RF VET++FDYGQR+K+E+EC + K
Sbjct: 1 MLKNEKAVVVFSGGQDSTTCLFWAKERFAEVETVTFDYGQRHKLEIECAAQIAK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ + +L +++L ++ ++LT++ + + LP TFV GRN++FL FAA LA
Sbjct: 55 ----EQGVKQTVLDMSLLNQLAPNALTRSDIEIAEGDGLPTTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW+LA
Sbjct: 111 GVGAKHLITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKSETWELA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+ + + I + + TCY G + G GC CPAC LR+ G ++ ++
Sbjct: 171 DQM---NALEYIRDHTLTCYNGIK------GDGCGECPACQLRKAGLDKYMQRR 215
>gi|117619436|ref|YP_856351.1| exsB protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|167016410|sp|A0KJA0|QUEC_AERHH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|117560843|gb|ABK37791.1| exsB protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 235
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 95/231 (41%), Positives = 147/231 (63%), Gaps = 21/231 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL R+D V ++FDYGQR++ E+E + ++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALSRYDEVHAITFDYGQRHREEIETARRLASQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +LG+++ S+LT++ V+ ++QDN LPNTFVPGRNI+FL AA AY+
Sbjct: 54 -GIAAHKVMDVTMLGELAISALTRDEIPVSFELQDNGLPNTFVPGRNILFLTLAAIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++A+ A++LG++ + TPLMWL K ETW LA
Sbjct: 113 VGAEAVITGVCETDFSGYPDCRDEFVKALNQAVSLGLDRAIRFETPLMWLDKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++ + +++ TCY G G GC +CPAC LR +G ++
Sbjct: 173 HYGH---LDTVRQQTLTCYNGI------AGDGCGACPACDLRSRGLQQYLA 214
>gi|91793370|ref|YP_563021.1| queuosine biosynthesis protein QueC [Shewanella denitrificans
OS217]
gi|123060891|sp|Q12MM8|QUEC_SHEDO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91715372|gb|ABE55298.1| ExsB [Shewanella denitrificans OS217]
Length = 232
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 100/228 (43%), Positives = 144/228 (63%), Gaps = 21/228 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL +FD V ++FDYGQR+ E+E + ++
Sbjct: 3 KAVVVFSGGQDSTTCLIQALTQFDEVHAITFDYGQRHNEEIEVAKALASQL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+L
Sbjct: 54 RIASHKVMDVSLLNELAISALTRDDIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR +RA+ETA+ LGM+ + + TPLMWL K ETW LA
Sbjct: 114 GANSVITGVCETDFSGYPDCRDQFVRAMETALCLGMDKQINLLTPLMWLNKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LV E + TCY G G GC CPAC+LRQKG ++
Sbjct: 174 YHSLTLVK---ELTLTCYNGI------IGQGCGDCPACHLRQKGLDDY 212
>gi|29346976|ref|NP_810479.1| putative aluminum resistance protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338874|gb|AAO76673.1| putative aluminum resistance protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 220
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 141/238 (59%), Gaps = 22/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 1 MMNRETALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E ++ ++ +G + H+SLT + + ++PNTFVPGRN+ FL AA
Sbjct: 58 -------VEFDVMDVSFIGTLGHNSLTDTTMVMDQEKPAGSVPNTFVPGRNLFFLSIAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW
Sbjct: 111 YARERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA ++G +++LI E+ TCY G + G GC CPAC LR++G ++ +K
Sbjct: 171 ALADELG---VLDLIRNETLTCYNGIQ------GDGCGHCPACTLRREGLEKYLKKKN 219
>gi|126651677|ref|ZP_01723880.1| possible aluminum resistance protein [Bacillus sp. B14905]
gi|126591626|gb|EAZ85732.1| possible aluminum resistance protein [Bacillus sp. B14905]
Length = 219
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 147/237 (62%), Gaps = 23/237 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA +RF +E ++FDYGQR+++E++C + +++
Sbjct: 2 KQEKAIVVFSGGQDSTTCLFWAKERFAEIEAVTFDYGQRHRLEIDCAKLIAEELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLA 123
+ HIL +++L ++ ++LT+ +K++D LP+TFVPGRN++FL FA LA
Sbjct: 57 -----IKHHILDMSLLNQLAPNALTRQ-DIKVEDGKNGELPSTFVPGRNLLFLSFAGVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++G +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K +TW+L
Sbjct: 111 SQVGAKHIITGVCETDFSGYPDCRDVFIKSLNVTLNLSMDDSFVIDTPLMWLNKAQTWEL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A G + V E + TCY G GC CPAC LR+KG ++ ++
Sbjct: 171 ADQFGALEFVR---ERTLTCYNGV------IADGCGECPACKLRKKGLDDYLSNRKE 218
>gi|167461682|ref|ZP_02326771.1| Aluminum resistance protein [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383446|ref|ZP_08057226.1| pre-queuosine 0 synthase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321152247|gb|EFX45073.1| pre-queuosine 0 synthase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 223
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 148/232 (63%), Gaps = 20/232 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL +F VET++FDYGQR+ +E++ + +++
Sbjct: 2 KQEKAIVVFSGGQDSTTCLFWALRQFGEVETVTFDYGQRHSLEMKVAKSIAEELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ S+LT K++A++ ++ P+TFV GRN++FL FAA +A +
Sbjct: 57 -----LKHTVLDMSLLNQLAPSALTRKDMAIEEKEGEPPSTFVDGRNMLFLTFAAVMAKQ 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G ++V GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K +TW+LA
Sbjct: 112 AGARHLVTGVCETDFSGYPDCRDAFIKSLNVTLNLAMDYPFVIHTPLMWLNKAQTWELAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + V E++ TCY G G GC CPAC LR G +++++
Sbjct: 172 QLGAYEFVK---EKTLTCYNGV------MGSGCGECPACKLRNAGLKQYEQQ 214
>gi|315613638|ref|ZP_07888545.1| transcription regulator ExsB [Streptococcus sanguinis ATCC 49296]
gi|315314329|gb|EFU62374.1| transcription regulator ExsB [Streptococcus sanguinis ATCC 49296]
Length = 217
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 144/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAITFAYGQRHHLEIQVAEEIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ LPNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGVRHHILDMSLLGQITENALTSDMEIEQKEGELPNTFVDGRNHLFLSFAAILAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWGLADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGSGCGDCPACHLRQHGLDVYLSQKGE 216
>gi|15896861|ref|NP_350210.1| PP-loop superfamily ATPase [Clostridium acetobutylicum ATCC 824]
gi|81529172|sp|Q97D53|QUEC_CLOAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|15026727|gb|AAK81550.1|AE007858_11 PP-loop superfamily ATPase, confers aluminum resistance
[Clostridium acetobutylicum ATCC 824]
gi|325511035|gb|ADZ22671.1| PP-loop superfamily ATPase, confers aluminum resistance
[Clostridium acetobutylicum EA 2018]
Length = 222
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 105/240 (43%), Positives = 144/240 (60%), Gaps = 22/240 (9%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+I AL++FSGGQDS+TCL WA R+ V +SFDY Q++K+ELEC + KK
Sbjct: 2 EISINKEKALVVFSGGQDSTTCLFWAKKRYKEVVAVSFDYNQKHKLELECAKDICKK--- 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E HIL + +L ++ +SLT+ V + PNTFV GRN++FL FA
Sbjct: 59 -------HGVEHHILDMKLLNQLAPNSLTRADMKVDEDAPKDGPPNTFVDGRNLLFLSFA 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A + GI NI+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K E
Sbjct: 112 AVFAKQRGINNIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQFVLITPLMWIDKAE 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWKLA D+G D+V E+ TCY G + G GC CPAC LR+ G++EFK Y+
Sbjct: 172 TWKLADDLGVLDIVK---NETLTCYNGIK------GNGCGECPACKLRKNGYVEFKRLYK 222
>gi|309798878|ref|ZP_07693139.1| ExsB protein [Streptococcus infantis SK1302]
gi|308117527|gb|EFO54942.1| ExsB protein [Streptococcus infantis SK1302]
Length = 217
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 146/234 (62%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAKEIAE-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETWKLA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWKLADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGTGCGDCPACHLRQHGLEVYLSQKGE 216
>gi|306824723|ref|ZP_07458067.1| transcription regulator ExsB [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432934|gb|EFM35906.1| transcription regulator ExsB [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 217
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 145/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDLEIEQKEREVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETWKLA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWKLADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGSGCGDCPACHLRQHGLDVYLSQKGE 216
>gi|212635181|ref|YP_002311706.1| ExsB protein [Shewanella piezotolerans WP3]
gi|254764384|sp|B8CM62|QUEC_SHEPW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|212556665|gb|ACJ29119.1| ExsB [Shewanella piezotolerans WP3]
Length = 228
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 95/230 (41%), Positives = 144/230 (62%), Gaps = 20/230 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + K+
Sbjct: 3 KAIVVFSGGQDSTTCLIQALTQYDEVHCVTFDYGQRHRQEIEIAKELSSKLGA------- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNN--LPNTFVPGRNIIFLVFAATLAYRLG 127
+L + IL D++ S+LT+++ ++ + +PNTFVPGRNI+FL A AY++
Sbjct: 56 --SSHQVLDVGILNDLTVSALTRDIPIEENKDGNAIPNTFVPGRNILFLTLAGIYAYQIN 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ GVCETD+SGYPDCR++ I++++TA+ GM+ +T+ TPLMWL K ETW LA
Sbjct: 114 ADVIITGVCETDFSGYPDCRNEFIKSMQTALMQGMDKQLTISTPLMWLDKAETWALADKY 173
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + L+ ++ TCY G + G GC +CPAC LRQ+G E+
Sbjct: 174 ---NSLELVRHQTLTCYNGLK------GDGCGTCPACILRQRGLDEYLAN 214
>gi|319901674|ref|YP_004161402.1| preQ(0) biosynthesis protein QueC [Bacteroides helcogenes P 36-108]
gi|319416705|gb|ADV43816.1| preQ(0) biosynthesis protein QueC [Bacteroides helcogenes P 36-108]
Length = 221
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 95/239 (39%), Positives = 141/239 (58%), Gaps = 24/239 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + K A AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +
Sbjct: 1 MNKVNKDA--ALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHQKEVELAREIAHRA 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLV 117
E ++ ++ +G + H+SLT + + + PNTFVPGRN+ FL
Sbjct: 59 K----------VEFEVMDVSFIGKLGHNSLTDMNMAMDQEKPKDGFPNTFVPGRNLFFLS 108
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
AA A GI++IV GV +TD+SGYPDCR ++++ +NL M+ +HTPLMW+ K
Sbjct: 109 VAAVYARERGISHIVTGVSQTDFSGYPDCRDVFVKSLNVTLNLAMDEQFVLHTPLMWIDK 168
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
ETW LA ++G +++L+ E+ TCY G + G GC CPAC LR++G ++
Sbjct: 169 AETWALADELG---VLDLVRHETLTCYNGVQ------GDGCGHCPACKLRKEGLDKYLA 218
>gi|262274644|ref|ZP_06052455.1| queuosine Biosynthesis QueC ATPase [Grimontia hollisae CIP 101886]
gi|262221207|gb|EEY72521.1| queuosine Biosynthesis QueC ATPase [Grimontia hollisae CIP 101886]
Length = 232
Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 144/235 (61%), Gaps = 21/235 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDY QR+K E+E V K +
Sbjct: 2 KKAVVVFSGGQDSTTCLIQALSEFDEVHCITFDYNQRHKQEIEVACDVAKTL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVTSHKVMDVGLLNELAISSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG ++ GVCETD+SGYPDCR+D ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 113 LGAQTVITGVCETDFSGYPDCRNDFVQSMNKSLVLGMDRELEIRTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
G + + + + TCY G G GC CPAC LRQKG ++ ++
Sbjct: 173 KYG---KLEYVRDNTLTCYNGV------IGRGCGDCPACDLRQKGLDDYLSDKEN 218
>gi|307707094|ref|ZP_07643891.1| queuosine biosynthesis protein queC [Streptococcus mitis SK321]
gi|307617620|gb|EFN96790.1| queuosine biosynthesis protein queC [Streptococcus mitis SK321]
Length = 217
Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGSGCGECPACHLRQHGLDVYLSQKGE 216
>gi|198276947|ref|ZP_03209478.1| hypothetical protein BACPLE_03152 [Bacteroides plebeius DSM 17135]
gi|198270472|gb|EDY94742.1| hypothetical protein BACPLE_03152 [Bacteroides plebeius DSM 17135]
Length = 221
Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 140/239 (58%), Gaps = 22/239 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL WA F++V LSF YGQ+++ E+E + +K
Sbjct: 1 MVNNKEALVVFSGGQDSTTCLFWAKKHFEKVYALSFLYGQKHEKEVELAREIARKAG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E ++ ++ +G + +SLT ++ + ++ PNTFVPGRN+ FL AA
Sbjct: 58 -------VEFEVMDVSFIGHLGKNSLTDTSIHMDEEKPKDSFPNTFVPGRNLFFLSIAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A GI ++V GV +TD+SGYPDCR I+++ +NL ME +HTPLMW+ K +TW
Sbjct: 111 YAREKGIHHMVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMEEQFVIHTPLMWIDKAQTW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LA ++G +++L+ E+ TCY G G GC CPAC LR++G ++ Q+
Sbjct: 171 ALADELG---VLDLVRNETLTCYNGIP------GDGCGHCPACKLRREGLEKYLASKQN 220
>gi|317492902|ref|ZP_07951326.1| exsB protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919024|gb|EFV40359.1| exsB protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 246
Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats.
Identities = 95/236 (40%), Positives = 140/236 (59%), Gaps = 20/236 (8%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A+++FSGGQDS+TCL ALD++D V ++FDYGQR++ E++ + K+
Sbjct: 17 KAMKRAVVVFSGGQDSTTCLIQALDQYDEVHCITFDYGQRHRAEIDVARDLAIKLGASA- 75
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQ-DNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + + ++ +PNTFVPGRNI+FL AA A
Sbjct: 76 --------HKVLDVGLLNELAISSLTRDNIPVPTESEDGIPNTFVPGRNILFLTLAAIYA 127
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI LGM V TPLMWL K ETW L
Sbjct: 128 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNKAITLGMARDVRFETPLMWLNKAETWAL 187
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++L+ E+ TCY G + G GC C AC+LR G E+
Sbjct: 188 AD---HYQKLDLVRRETLTCYNGIQ------GDGCGECAACHLRSHGLNEYLANQA 234
>gi|315645293|ref|ZP_07898418.1| possible aluminum resistance protein [Paenibacillus vortex V453]
gi|315279335|gb|EFU42641.1| possible aluminum resistance protein [Paenibacillus vortex V453]
Length = 223
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 99/232 (42%), Positives = 146/232 (62%), Gaps = 20/232 (8%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
KK A+++FSGGQDS+TCL WA+ +FD VE ++F+YGQR+ +E+EC + EL
Sbjct: 3 KKNKKAVVVFSGGQDSTTCLFWAMKQFDEVEAVTFNYGQRHALEIECANQIAD---ELGV 59
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
KW +L +++LG ++ ++LT +V + D P+TFV GRN +FL FAA A
Sbjct: 60 KWT-------LLDMSLLGQLTQNALTRDDVEIVHNDGEFPSTFVEGRNHLFLSFAAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G +IV GVCETD+SGYPDCR D ++++ +NL M+ + +HTPLMW+ K ETW++A
Sbjct: 113 GVGARHIVTGVCETDFSGYPDCRDDFVKSLNVTLNLAMDHNFIIHTPLMWINKAETWEMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G + V +++ TCY G G GC +CPAC LR+ G F +
Sbjct: 173 DQLGAFEFVR---KKTLTCYNGV------IGDGCGNCPACQLRKAGLDTFLQ 215
>gi|229002866|ref|ZP_04160742.1| hypothetical protein bmyco0003_57960 [Bacillus mycoides Rock3-17]
gi|229008540|ref|ZP_04165967.1| hypothetical protein bmyco0002_53200 [Bacillus mycoides Rock1-4]
gi|228752735|gb|EEM02336.1| hypothetical protein bmyco0002_53200 [Bacillus mycoides Rock1-4]
gi|228758391|gb|EEM07562.1| hypothetical protein bmyco0003_57960 [Bacillus mycoides Rock3-17]
Length = 221
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 148/236 (62%), Gaps = 20/236 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + ++
Sbjct: 1 MYSNDKAIVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAAEIANELG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 -------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWK+
Sbjct: 111 KQVGAHHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKI 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 171 ADELGAFEFVR---EKTLTCYNGI------IGNGCGECPACQLRKAGLDTYLQERE 217
>gi|307707499|ref|ZP_07643981.1| ExsB protein [Streptococcus mitis NCTC 12261]
gi|307616451|gb|EFN95642.1| ExsB protein [Streptococcus mitis NCTC 12261]
Length = 217
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 144/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKKHYETVEAVTFAYGQRHHLEIQVAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGSGCGDCPACHLRQHGLDVYLSQKGE 216
>gi|255008270|ref|ZP_05280396.1| putative aluminum resistance protein [Bacteroides fragilis 3_1_12]
gi|313145991|ref|ZP_07808184.1| queuosine biosynthesis protein queC [Bacteroides fragilis 3_1_12]
gi|313134758|gb|EFR52118.1| queuosine biosynthesis protein queC [Bacteroides fragilis 3_1_12]
Length = 220
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 135/238 (56%), Gaps = 22/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K SA++LFSGGQDS+TCL WA F +V LSF YGQ++ E+E + ++
Sbjct: 1 MMKNDSAVVLFSGGQDSTTCLFWAKKHFSKVYALSFLYGQKHAHEVELARGIAERAG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E H++ + +G + +SLT ++ +++ PNTFVPGRN+ FL AA
Sbjct: 58 -------VEFHVMDTSFIGSLGSNSLTDTSISMDEDKPEDSFPNTFVPGRNLFFLSIAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A G ++V GV +TDYSGYPDCR I+++ +NL M+ +HTPLMW+ K ETW
Sbjct: 111 FAREQGAFHLVTGVSQTDYSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA ++G DLV E+ TCY G GC CPAC LR++G E+ K
Sbjct: 171 ALADELGVFDLVR---NETLTCYNGIP------ADGCGHCPACKLRKQGLEEYLSKRN 219
>gi|297584922|ref|YP_003700702.1| exsB protein [Bacillus selenitireducens MLS10]
gi|297143379|gb|ADI00137.1| exsB protein [Bacillus selenitireducens MLS10]
Length = 219
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 147/237 (62%), Gaps = 20/237 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL WAL+RF VET++FDY QR+ E+E + K++
Sbjct: 1 MLNEEKALVVFSGGQDSTTCLFWALERFKEVETVTFDYHQRHSQEIEVAEGIAKELG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ +L L++L +S ++LT+ ++A++ +D LP+TFVPGRN +FL FA +A
Sbjct: 58 -------VKNTVLDLSLLNQLSANALTRSDIAIEQKDRELPSTFVPGRNHLFLSFAGVMA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+G +IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW L
Sbjct: 111 KSMGAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDDTFVIDTPLMWLNKKETWAL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A ++G ++ + E++ TCY G GC CPAC LR+ G ++ + +
Sbjct: 171 ADELGA---LDFVREKTLTCYNGI------LADGCGECPACELRKNGLDDYLNEKVN 218
>gi|322375720|ref|ZP_08050232.1| ExsB protein [Streptococcus sp. C300]
gi|321279428|gb|EFX56469.1| ExsB protein [Streptococcus sp. C300]
Length = 217
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 145/231 (62%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAEEIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +L
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + E++ TCY G G GC CPAC+LRQ G + +
Sbjct: 172 LGSF---DYVREKTLTCYNGI------IGSGCGDCPACHLRQHGLDLYLSQ 213
>gi|295703391|ref|YP_003596466.1| queuosine biosynthesis protein QueC [Bacillus megaterium DSM 319]
gi|294801050|gb|ADF38116.1| queuosine biosynthesis protein QueC [Bacillus megaterium DSM 319]
Length = 221
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 140/233 (60%), Gaps = 20/233 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WAL F VET++F YGQR+ E+E + +
Sbjct: 1 MMKNEKAIVVFSGGQDSTTCLFWALKNFKEVETVTFQYGQRHSQEIEVAKAIAADLG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L +++L ++ ++LT ++ ++ ++ LP TFV GRN++FL FAA LA
Sbjct: 58 -------VKHTVLDMSLLNQLAPNALTRDDIEIEQKEGELPTTFVDGRNLLFLSFAAVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETW L
Sbjct: 111 KNSGGRHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDFEFVIHTPLMWIDKAETWAL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A ++G + + E++ TCY G GC CPAC LR++G ++ +
Sbjct: 171 ADELGA---LEYVREKTLTCYNGI------VADGCGECPACQLRKRGLDQYMQ 214
>gi|331265895|ref|YP_004325525.1| ExsB family protein; Adenosine nucleotide binding superfamily of
proteins [Streptococcus oralis Uo5]
gi|326682567|emb|CBZ00184.1| ExsB family protein; Adenosine nucleotide binding superfamily of
proteins [Streptococcus oralis Uo5]
Length = 217
Score = 280 bits (718), Expect = 9e-74, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 145/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + + VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYKTVEAVTFAYGQRHHLEIQVAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +L
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGSGCGDCPACHLRQHGLDVYLSQKGE 216
>gi|53712758|ref|YP_098750.1| putative aluminum resistance protein [Bacteroides fragilis YCH46]
gi|52215623|dbj|BAD48216.1| putative aluminum resistance protein [Bacteroides fragilis YCH46]
Length = 220
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 134/238 (56%), Gaps = 22/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K SA++LFSGGQDS+TCL WA F +V LSF YGQ++ E+E + ++
Sbjct: 1 MMKNDSAVVLFSGGQDSTTCLFWAKKHFKKVYALSFLYGQKHAHEVELARGIAERAG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E H++ + +G + +SLT ++ ++ PNTFVPGRN+ FL AA
Sbjct: 58 -------VEFHVMDTSFIGSLGSNSLTDTSISMDEDKPKDSFPNTFVPGRNLFFLSIAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A G ++V GV +TDYSGYPDCR I+++ +NL M+ +HTPLMW+ K ETW
Sbjct: 111 FAREQGAFHLVTGVSQTDYSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA ++G DLV E+ TCY G GC CPAC LR++G E+ K
Sbjct: 171 ALADELGVFDLVR---NETLTCYNGIP------ADGCGHCPACKLRKQGLEEYLSKRN 219
>gi|310640610|ref|YP_003945368.1| atpase, confers aluminum resistance [Paenibacillus polymyxa SC2]
gi|309245560|gb|ADO55127.1| Putative ATPase, confers aluminum resistance [Paenibacillus
polymyxa SC2]
Length = 227
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 139/233 (59%), Gaps = 20/233 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A+++FSGGQDS+TCL WA F VET++FDYGQR+K E+E + ++
Sbjct: 1 MFTNEKAVVVFSGGQDSTTCLFWAKKHFAEVETVTFDYGQRHKQEIEVAAGIASELG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 -------VPQTVLDMSLLNQLAPNALTRTDIDITQEEGELPSTFVDGRNLLFLSFAAVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW++
Sbjct: 111 KQKGARHIITGVCETDFSGYPDCRDSFIKSLNVTLNLSMDYPFVIHTPLMWLNKAETWQM 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A ++ + V + TCY G G GC CPAC LR+ G ++
Sbjct: 171 ADELKAFEFVR---TRTLTCYNGI------IGDGCGECPACNLRRAGLEQYLA 214
>gi|153808596|ref|ZP_01961264.1| hypothetical protein BACCAC_02894 [Bacteroides caccae ATCC 43185]
gi|149128918|gb|EDM20135.1| hypothetical protein BACCAC_02894 [Bacteroides caccae ATCC 43185]
Length = 221
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 139/239 (58%), Gaps = 22/239 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ SAL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 1 MNMNKESALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHEKEVELAREIARKAE-- 58
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
E ++ ++ +G + H+SLT + + ++ PNTFVPGRN+ FL AA
Sbjct: 59 --------VEFDVMDVSFIGSLGHNSLTDTSMVMDQEKPADSFPNTFVPGRNLFFLSIAA 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI +++ GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ET
Sbjct: 111 VYARERGINHLITGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAET 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
W LA ++G ++++I E+ TCY G G GC CPAC LR++G ++ +
Sbjct: 171 WALADELG---VLDVIRHETLTCYNGIP------GDGCGHCPACTLRREGLEKYLKSKN 220
>gi|322392674|ref|ZP_08066134.1| transcription regulator ExsB [Streptococcus peroris ATCC 700780]
gi|321144666|gb|EFX40067.1| transcription regulator ExsB [Streptococcus peroris ATCC 700780]
Length = 217
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 146/234 (62%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA ++RVE ++F YGQR+ +E++ + +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKQHYERVEAVTFAYGQRHHLEIQVAKEIAE-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIHHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWALADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G R G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGIR------GAGCGDCPACHLRQHGLEVYLSQKGE 216
>gi|323488451|ref|ZP_08093698.1| aluminum resistance protein [Planococcus donghaensis MPA1U2]
gi|323397958|gb|EGA90757.1| aluminum resistance protein [Planococcus donghaensis MPA1U2]
Length = 221
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 138/232 (59%), Gaps = 20/232 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ F V T++FDYGQR+ E+EC + ++ L
Sbjct: 2 KNEKAVVVFSGGQDSTTCLFWAIKNFKEVATVTFDYGQRHSAEIECARKIADELGVLF-- 59
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + ++ +S ++LT ++ + ++ LP+TFVPGRN++FL FAA A
Sbjct: 60 --------KVLDMTLINQLSANALTRDDIEVTAEEGELPSTFVPGRNLLFLSFAAVYADA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +++ GV +TD+SGYPDCR IR++ +NL M+ +HTPLMWL K + W+L+
Sbjct: 112 IGSRHLITGVSQTDFSGYPDCRDTFIRSLNVTLNLSMDKQFIIHTPLMWLDKADVWELSD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G D V E++ TCY G GC CPAC LR +G ++ K
Sbjct: 172 TLGALDFVQ---EKTLTCYNGIPST------GCGECPACQLRNEGLARYQAK 214
>gi|59712187|ref|YP_204963.1| queuosine biosynthesis protein QueC [Vibrio fischeri ES114]
gi|75353773|sp|Q5E4H1|QUEC_VIBF1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|59480288|gb|AAW86075.1| queuosine biosynthesis protein QueC [Vibrio fischeri ES114]
Length = 227
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+++FSGGQDS+TCL AL ++D V ++FDYGQR+ E+E V ++
Sbjct: 3 TAIVVFSGGQDSTTCLIQALTQYDHVHCITFDYGQRHNQEIEVAKKVSIELGA------- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+L
Sbjct: 56 --ASHKVMDVGLLNELAVSSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + +++I ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 114 GAEAVITGVCETDFSGYPDCRDEFVKSINQSLVLGMDRQLEIKTPLMWLNKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++ + + TCY G G GC CP+C LR+ G + E +
Sbjct: 174 YG---KLDYVRNHTLTCYNGV------IGDGCGDCPSCDLRKNGLDAYLENKE 217
>gi|325298550|ref|YP_004258467.1| exsB protein [Bacteroides salanitronis DSM 18170]
gi|324318103|gb|ADY35994.1| exsB protein [Bacteroides salanitronis DSM 18170]
Length = 222
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 133/235 (56%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL++FSGGQDS+TCL WA F V L+F YGQ++ E++ + +K
Sbjct: 3 KNKALVVFSGGQDSTTCLFWAKKHFKEVYALTFLYGQKHVKEVDLAREIARKAEVHFD-- 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ ++ +G + +SLT + + + N PNTFVPGRN+ FL AA A
Sbjct: 61 --------VMDVSFIGHLGKNSLTDLSIPMDEEKPEGNYPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI+++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGISHLVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G D+V ++ TCY G G GC CPAC LR++G ++ E Q
Sbjct: 173 DELGAFDIVR---NDTLTCYNGIP------GDGCGHCPACKLRREGLEKYLENKQ 218
>gi|189462596|ref|ZP_03011381.1| hypothetical protein BACCOP_03286 [Bacteroides coprocola DSM 17136]
gi|189430757|gb|EDU99741.1| hypothetical protein BACCOP_03286 [Bacteroides coprocola DSM 17136]
Length = 219
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E + +K
Sbjct: 3 KDAALVVFSGGQDSTTCLFWAKKHFKKVYALSFLYGQKHVKEVELAREIARKAE------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ H++ ++ +G + +SLT ++ + + PNTFVPGRN+ FL AA A
Sbjct: 57 ----VDFHVMDVSFIGHLGKNSLTDTSIHMDEEKPEGTFPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL ME +HTPLMW+ K +TW LA
Sbjct: 113 ERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMEEQFVIHTPLMWIDKAQTWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G +++L+ E+ TCY G G GC CPAC LR++G ++
Sbjct: 173 DELG---VLDLVRNETLTCYNGIP------GDGCGHCPACKLRREGLEKYLA 215
>gi|307709656|ref|ZP_07646108.1| queuosine biosynthesis protein queC [Streptococcus mitis SK564]
gi|307619554|gb|EFN98678.1| queuosine biosynthesis protein queC [Streptococcus mitis SK564]
Length = 217
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 144/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E + TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVRENTLTCYNGI------IGSGCGDCPACHLRQHGLDVYLSQKGE 216
>gi|253572607|ref|ZP_04850008.1| queuosine biosynthesis protein queC [Bacteroides sp. 1_1_6]
gi|298386365|ref|ZP_06995921.1| ExsB protein [Bacteroides sp. 1_1_14]
gi|110816211|sp|Q8A7F8|QUEC_BACTN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|251837739|gb|EES65829.1| queuosine biosynthesis protein queC [Bacteroides sp. 1_1_6]
gi|298260742|gb|EFI03610.1| ExsB protein [Bacteroides sp. 1_1_14]
Length = 219
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 140/235 (59%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 3 RETALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + ++PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFDVMDVSFIGTLGHNSLTDTTMVMDQEKPAGSVPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G +++LI E+ TCY G + G GC CPAC LR++G ++ +K
Sbjct: 173 DELG---VLDLIRNETLTCYNGIQ------GDGCGHCPACTLRREGLEKYLKKKN 218
>gi|322388782|ref|ZP_08062379.1| transcription regulator ExsB [Streptococcus infantis ATCC 700779]
gi|321140401|gb|EFX35909.1| transcription regulator ExsB [Streptococcus infantis ATCC 700779]
Length = 217
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 102/234 (43%), Positives = 149/234 (63%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA ++RVE ++F YGQR+ +E++ V K+I E
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKQHYERVEAVTFAYGQRHHLEIQ----VAKEISE---- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGTGCGDCPACHLRQHGLEVYLSQKGE 216
>gi|197334729|ref|YP_002156396.1| ExsB protein [Vibrio fischeri MJ11]
gi|254764390|sp|B5FF08|QUEC_VIBFM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|197316219|gb|ACH65666.1| ExsB protein [Vibrio fischeri MJ11]
Length = 227
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+++FSGGQDS+TCL AL ++D V ++FDYGQR+ E+E V ++
Sbjct: 3 TAIVVFSGGQDSTTCLIQALTQYDHVHCITFDYGQRHNQEIEVAKKVAIELGA------- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+L
Sbjct: 56 --ASHKVMDVGLLNELAVSSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETD+SGYPDCR + +++I ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 114 GAEAVLTGVCETDFSGYPDCRDEFVKSINQSLVLGMDRQLEIKTPLMWLNKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++ + + TCY G G GC CP+C LR+ G + E +
Sbjct: 174 YG---KLDYVRNHTLTCYNGV------IGDGCGDCPSCDLRKNGLDAYLENKE 217
>gi|54308161|ref|YP_129181.1| queuosine biosynthesis protein QueC [Photobacterium profundum SS9]
gi|81400103|sp|Q6LTJ7|QUEC_PHOPR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|46912589|emb|CAG19379.1| putative exsB protein [Photobacterium profundum SS9]
Length = 232
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 144/232 (62%), Gaps = 21/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ +D V ++FDYGQR+K+E+E + K++
Sbjct: 2 RKAVVVFSGGQDSTTCLIQAIKNYDEVHCITFDYGQRHKLEIEVAQSITKEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL + AY+
Sbjct: 54 -GITAHKVMDVGLLNELAISSLTRDNIEVSHELQANGLPNSFVPGRNILFLTLSGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 113 IGAEAVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRALKIETPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++ + E++ TCY G G GC +CP+C LR+ G ++
Sbjct: 173 QYKQ---LDFVREKTLTCYNGI------IGDGCGNCPSCDLRRAGLEDYLTN 215
>gi|24379365|ref|NP_721320.1| putative ATPase, confers aluminum resistance [Streptococcus mutans
UA159]
gi|81451748|sp|Q8DUK7|QUEC_STRMU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24377292|gb|AAN58626.1|AE014932_9 putative ATPase, confers aluminum resistance [Streptococcus mutans
UA159]
Length = 217
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/231 (42%), Positives = 146/231 (63%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VET++F YGQR+ ELE +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMKHYEYVETVTFSYGQRHSQELEVAKEIA--------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + HIL +++LG I+ ++LT ++A++ +D +PNTFV GRN +FL FAA LA +
Sbjct: 53 -AEQGVKHHILDMSLLGQITENALTSDIAIETKDGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +IV GVC+TD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 KIRDIVTGVCQTDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +++ TCY G R G GC CPAC+LRQ G ++ +
Sbjct: 172 LGKF---DYVRQKTLTCYNGIR------GTGCRQCPACHLRQAGLEKYLSQ 213
>gi|289167420|ref|YP_003445689.1| queuosine biosynthesis protein queC [Streptococcus mitis B6]
gi|288906987|emb|CBJ21821.1| queuosine biosynthesis protein queC [Streptococcus mitis B6]
Length = 217
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 146/234 (62%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAQEIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQQ 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GIT+IV GVCETD+SGYPDCR ++++ +NL ME + TPLMWL K ETW+LA
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMEYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGSGCGDCPACHLRQHGLDVYLSQKGE 216
>gi|90414825|ref|ZP_01222792.1| putative exsB protein [Photobacterium profundum 3TCK]
gi|90324068|gb|EAS40655.1| putative exsB protein [Photobacterium profundum 3TCK]
Length = 232
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 144/232 (62%), Gaps = 21/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A++ +D V ++FDYGQR+K+E+E + K++
Sbjct: 2 RKAVVVFSGGQDSTTCLIQAIENYDEVHCITFDYGQRHKLEIEVAQSITKEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q N LPN+FVPGRNI+FL + AY+
Sbjct: 54 -GITAHKVMDVGLLNELAISSLTRDNIAVSHELQANGLPNSFVPGRNILFLTLSGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++++ ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 113 IGAEAVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRALKIETPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++ + E++ TCY G G GC CP+C LR+ G ++
Sbjct: 173 QYKQ---LDFVREKTLTCYNGI------IGDGCGDCPSCDLRRAGLEDYLTN 215
>gi|293365936|ref|ZP_06612639.1| transcription regulator ExsB [Streptococcus oralis ATCC 35037]
gi|307702339|ref|ZP_07639297.1| queuosine biosynthesis protein queC [Streptococcus oralis ATCC
35037]
gi|291315614|gb|EFE56064.1| transcription regulator ExsB [Streptococcus oralis ATCC 35037]
gi|307624142|gb|EFO03121.1| queuosine biosynthesis protein queC [Streptococcus oralis ATCC
35037]
Length = 217
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 144/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFSYGQRHHLEIQVAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIQDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKSETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ D + + E + TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 L---DAFDYVRERTLTCYNGI------IGSGCGDCPACHLRQHGLDVYLSQKGE 216
>gi|255525615|ref|ZP_05392549.1| exsB protein [Clostridium carboxidivorans P7]
gi|296185502|ref|ZP_06853912.1| ExsB protein [Clostridium carboxidivorans P7]
gi|255510705|gb|EET87011.1| exsB protein [Clostridium carboxidivorans P7]
gi|296050336|gb|EFG89760.1| ExsB protein [Clostridium carboxidivorans P7]
Length = 222
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 144/234 (61%), Gaps = 22/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA +F V +SFDY Q++K+ELEC + KK
Sbjct: 3 KEKAVVVFSGGQDSTTCLFWAKKKFKEVIAVSFDYNQKHKLELECAKSICKKYN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E HIL L +L ++ +SLT+ V ++ LPN+FV GRN++FL F A A
Sbjct: 57 ----VEHHILDLNLLNQLAPNSLTRQDIKVDKEVPSGGLPNSFVDGRNMLFLTFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ I NI+ GV ++D+SGYPDCR I+++ +NL M+ ++TPLMW+ K ETWK+A
Sbjct: 113 QRDINNIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQFDIYTPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+ +++++ E+ TCY G + G GC CPAC LR+ G++EFK KY
Sbjct: 173 YDL---SVLDIVKNETLTCYNGIK------GNGCGECPACRLRKNGYLEFKNKY 217
>gi|145554190|gb|ABP68893.1| unknown [Bacillus sp. PL-12]
Length = 218
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 143/233 (61%), Gaps = 23/233 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WA+ F VE ++FDY QR + E++C + +
Sbjct: 2 KNEKAVVVFSGGQDSTTCLFWAMKEFKEVEAVTFDYNQRXRTEIQCAKDIASGLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKI---QDNNLPNTFVPGRNIIFLVFAATLA 123
+ H+L +++L ++ ++LT++ +++ ++ LP+TFVPGRN++FL FA LA
Sbjct: 57 -----VKHHVLDMSLLNQLAPNALTRS-DIEVKDGEEGELPSTFVPGRNLLFLSFAGVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ +IV GVCETD+SGYPDCR I+++ +NL ++ + +HTPLMWL K +TWKL
Sbjct: 111 SQVNAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSIDQNFVIHTPLMWLNKAQTWKL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A ++ + V + + TCY G GC CPAC LR+KG E+ E
Sbjct: 171 ADELDAFEFVR---KRTLTCYNGI------IADGCGICPACKLRKKGLDEYLE 214
>gi|294498041|ref|YP_003561741.1| queuosine biosynthesis protein QueC [Bacillus megaterium QM B1551]
gi|294347978|gb|ADE68307.1| queuosine biosynthesis protein QueC [Bacillus megaterium QM B1551]
Length = 220
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 139/231 (60%), Gaps = 20/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A+++FSGGQDS+TCL WAL F VET++F YGQR+ E+E + +
Sbjct: 2 KNEKAIVVFSGGQDSTTCLFWALKNFKEVETVTFQYGQRHSQEIEVAKAIAADLG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L +++L ++ ++LT ++ ++ ++ LP TFV GRN++FL FAA LA
Sbjct: 57 -----VKHTVLDMSLLNQLAPNALTRDDIEIEQKEGELPTTFVDGRNLLFLSFAAVLAKN 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 112 SGGRHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDFEFVIHTPLMWIDKAETWALAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G + + E++ TCY G GC CPAC LR++G ++ +
Sbjct: 172 ELGA---LEYVREKTLTCYNGI------VADGCGECPACQLRKRGLDQYMQ 213
>gi|75759341|ref|ZP_00739438.1| Queuosine biosynthesis protein QueC [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493173|gb|EAO56292.1| Queuosine biosynthesis protein QueC [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 224
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 152/241 (63%), Gaps = 23/241 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A+++FSGGQDS+TCL WA+++F VE ++F+Y QR+K+E++C + K++
Sbjct: 1 MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAKIAKEL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FA
Sbjct: 59 G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI-NLGMESHVTVHTPLMWLKKY 178
A LA ++G +IV GVCETD+SGYPDCR ++++ N+ M+ +HTPLMW+ K
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTFXNISMDYPFVIHTPLMWIDKA 168
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
ETWKL+ ++G + V E++ CY G G GC CPAC LR+ G + ++
Sbjct: 169 ETWKLSDELGAFEFVR---EKTLACYNGI------IGDGCGECPACQLRKAGLDTYLQER 219
Query: 239 Q 239
+
Sbjct: 220 E 220
>gi|160891982|ref|ZP_02072985.1| hypothetical protein BACUNI_04441 [Bacteroides uniformis ATCC 8492]
gi|270296365|ref|ZP_06202565.1| exsB protein [Bacteroides sp. D20]
gi|317480437|ref|ZP_07939533.1| ExsB protein [Bacteroides sp. 4_1_36]
gi|156858460|gb|EDO51891.1| hypothetical protein BACUNI_04441 [Bacteroides uniformis ATCC 8492]
gi|270273769|gb|EFA19631.1| exsB protein [Bacteroides sp. D20]
gi|316903384|gb|EFV25242.1| ExsB protein [Bacteroides sp. 4_1_36]
Length = 218
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 137/235 (58%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E++ + +K
Sbjct: 3 RDTALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHQKEVDLARAIARKAG------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + ++ PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFEVMDVSFIGRLGHNSLTDAGMEMDQEKPADSFPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G ++ LI E+ TCY G G GC CPAC LR++G +F +
Sbjct: 173 DELG---VLELIRHETLTCYNGIP------GDGCGHCPACTLRREGLEKFLASTK 218
>gi|326404567|ref|YP_004284649.1| 7-cyano-7-deazaguanine synthase [Acidiphilium multivorum AIU301]
gi|325051429|dbj|BAJ81767.1| 7-cyano-7-deazaguanine synthase [Acidiphilium multivorum AIU301]
Length = 246
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 119/231 (51%), Positives = 163/231 (70%), Gaps = 2/231 (0%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL+LFSGGQDS TCL+WALDR+DRVET+ F YGQR+ VELECR +R I L P W+ +
Sbjct: 12 ALVLFSGGQDSGTCLAWALDRYDRVETIGFFYGQRHAVELECRAPLRAAIAGLRP-WRAT 70
Query: 71 LGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG D +L ++ ++ +T + ++ + LPNTFVPGRN++FL +AA LAYR GI
Sbjct: 71 LGADTMLDISAALATLGATAMTAEIEIETTEAGLPNTFVPGRNLLFLTYAAALAYRRGIG 130
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G+CETDYSGYPDCR+ T++A++ A++LG++ VTV TPLM+ K TW+LA ++GG
Sbjct: 131 TLVGGMCETDYSGYPDCRNTTMQAMQLALSLGLDRAVTVETPLMYRDKAATWELAAELGG 190
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LV + SH+CY G+R ++WGYGC +CPAC LR GW ++ D
Sbjct: 191 AALVEALRTGSHSCYRGERATLHDWGYGCGTCPACELRAAGWQRWRAARAD 241
>gi|209695424|ref|YP_002263353.1| queuosine biosynthesis protein QueC [Aliivibrio salmonicida
LFI1238]
gi|254764296|sp|B6EH68|QUEC_ALISL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|208009376|emb|CAQ79650.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 227
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 142/233 (60%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+++FSGGQDS+TCL AL +D V ++FDYGQR+ E+E V +
Sbjct: 3 TAIVVFSGGQDSTTCLIQALTHYDHVHCITFDYGQRHNQEIEVAKSVALDLGA------- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+L
Sbjct: 56 --TSHKVMDVGLLNELAVSSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR + +++I ++ LGM+ + + TPLMWL K ETW LA
Sbjct: 114 GAESVITGVCETDFSGYPDCRDEFVKSINQSLVLGMDRKLKIDTPLMWLNKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++ + ++ TCY G G GC CP+C LR+ G ++ +
Sbjct: 174 YG---KLDYVRNQTLTCYNGV------IGDGCGDCPSCDLRKNGLDDYLANKE 217
>gi|218130072|ref|ZP_03458876.1| hypothetical protein BACEGG_01658 [Bacteroides eggerthii DSM 20697]
gi|317476564|ref|ZP_07935811.1| exsB protein [Bacteroides eggerthii 1_2_48FAA]
gi|217987792|gb|EEC54119.1| hypothetical protein BACEGG_01658 [Bacteroides eggerthii DSM 20697]
gi|316907307|gb|EFV29014.1| exsB protein [Bacteroides eggerthii 1_2_48FAA]
Length = 231
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E++ + +K
Sbjct: 16 KEAALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHRKEVDLAREIARKAG------ 69
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++++G + +SLT + + ++ PNTFVPGRN+ FL AA A
Sbjct: 70 ----VEFEVMDVSLIGKLGRNSLTDTGMAMDEEKPADSFPNTFVPGRNLFFLSIAAVYAR 125
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ HTPLMW+ K ETW LA
Sbjct: 126 EKGINHIVTGVSQTDFSGYPDCRDTFIKSLNVTLNLAMDGQFVFHTPLMWIDKAETWALA 185
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G +++LI E+ TCY G G GC CPAC LR++G ++
Sbjct: 186 DELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGLEKYLA 228
>gi|330830003|ref|YP_004392955.1| putative (Aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Aeromonas veronii B565]
gi|328805139|gb|AEB50338.1| Putative (Aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Aeromonas veronii B565]
Length = 235
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 92/231 (39%), Positives = 145/231 (62%), Gaps = 21/231 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL R+D V ++FDYGQR++ E++ + +
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALARYDEVHAITFDYGQRHREEIDTARRLGSAL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ S+LT++ V+ ++QDN LPNTFVPGRNI+FL A+ AY+
Sbjct: 54 -GIAAHKVMDVTLLNELAVSALTRDDIPVSCELQDNGLPNTFVPGRNILFLTLASIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++A+ A++LG++ + TPLMWL K ETW LA
Sbjct: 113 VGAEAVITGVCETDFSGYPDCRDEFVKALNQAVSLGLDRGIRFETPLMWLDKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++ + +++ TCY G G GC +CPAC LR++G +
Sbjct: 173 HYGH---LDTVRQQTLTCYNGI------AGDGCGTCPACELRRRGLNNYLA 214
>gi|60680908|ref|YP_211052.1| putative ExsB family protein [Bacteroides fragilis NCTC 9343]
gi|253563256|ref|ZP_04840713.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_2_5]
gi|265762860|ref|ZP_06091428.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_16]
gi|81316024|sp|Q5LFI6|QUEC_BACFN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816210|sp|Q64WB0|QUEC_BACFR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|60492342|emb|CAH07108.1| putative ExsB family protein [Bacteroides fragilis NCTC 9343]
gi|251947032|gb|EES87314.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_2_5]
gi|263255468|gb|EEZ26814.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_16]
gi|301162471|emb|CBW22017.1| putative ExsB family protein [Bacteroides fragilis 638R]
Length = 219
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 96/236 (40%), Positives = 133/236 (56%), Gaps = 22/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SA++LFSGGQDS+TCL WA F +V LSF YGQ++ E+E + ++
Sbjct: 2 KNDSAVVLFSGGQDSTTCLFWAKKHFKKVYALSFLYGQKHAHEVELARGIAERAG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
E H++ + +G + +SLT ++ ++ PNTFVPGRN+ FL AA A
Sbjct: 57 -----VEFHVMDTSFIGSLGSNSLTDTSISMDEDKPKDSFPNTFVPGRNLFFLSIAAVFA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G ++V GV +TDYSGYPDCR I+++ +NL M+ +HTPLMW+ K ETW L
Sbjct: 112 REQGAFHLVTGVSQTDYSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G DLV E+ TCY G GC CPAC LR++G E+ K
Sbjct: 172 ADELGVFDLVR---NETLTCYNGIP------ADGCGHCPACKLRKQGLEEYLSKRN 218
>gi|121533884|ref|ZP_01665710.1| exsB protein [Thermosinus carboxydivorans Nor1]
gi|121307395|gb|EAX48311.1| exsB protein [Thermosinus carboxydivorans Nor1]
Length = 223
Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 140/233 (60%), Gaps = 21/233 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA+ F VE ++FDYGQR++ E+EC +
Sbjct: 6 KENALVVFSGGQDSTTCLFWAMKHFQEVEAVTFDYGQRHRAEIECAQKIA---------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAYR 125
+ IL L++L ++ S+LT+ ++ +K +N LP TFVPGRN++FL FAA LA +
Sbjct: 56 AEQGIAHTILDLSLLNQLAPSALTRADIEVKAGENGGLPTTFVPGRNLLFLSFAAVLARQ 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
I +IV GVCETD+SGYPDCR I+++ I L M+ +HTPLMWL K ETW+LA
Sbjct: 116 KNIRHIVTGVCETDFSGYPDCRDAFIKSLNVTIQLAMDYQFVIHTPLMWLNKAETWELAD 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G +++ I + TCY G G GC CPAC LR G + K
Sbjct: 176 QLG---VLDYIRSNTLTCYHGV------IGDGCGQCPACRLRVAGLNAYLAKR 219
>gi|329962178|ref|ZP_08300185.1| protein ExsB [Bacteroides fluxus YIT 12057]
gi|328530465|gb|EGF57339.1| protein ExsB [Bacteroides fluxus YIT 12057]
Length = 219
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 137/235 (58%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 3 RDTALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHRQEVELAREIARKAG------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + ++ PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFEVMDVSFIGRLGHNSLTDAGMEMDREKPADSFPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G ++ LI E+ TCY G G GC CPAC LR++G ++ +
Sbjct: 173 DELG---VLELIRHETLTCYNGIP------GDGCGHCPACTLRREGLEKYLASVK 218
>gi|290580632|ref|YP_003485024.1| putative aluminium resistance ATPase [Streptococcus mutans NN2025]
gi|254997531|dbj|BAH88132.1| putative ATPase, confers aluminum resistance [Streptococcus mutans
NN2025]
Length = 217
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 99/231 (42%), Positives = 146/231 (63%), Gaps = 19/231 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VET++F YGQR+ ELE +
Sbjct: 2 KRQSALIVFSGGQDSTTCLFWAMKHYEYVETVTFSYGQRHSQELEVAKEIA--------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + HIL +++LG I+ ++LT ++A++ +D +PNTFV GRN +FL FAA LA +
Sbjct: 53 -AEQGVKHHILDMSLLGQITENALTSDIAIETKDGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +IV GVC+TD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 KIRDIVTGVCQTDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +++ TCY G R G GC CPAC+LRQ G ++ +
Sbjct: 172 LGKF---DYVRQKTLTCYNGIR------GTGCRQCPACHLRQAGLEKYLSQ 213
>gi|167761944|ref|ZP_02434071.1| hypothetical protein BACSTE_00288 [Bacteroides stercoris ATCC
43183]
gi|167700176|gb|EDS16755.1| hypothetical protein BACSTE_00288 [Bacteroides stercoris ATCC
43183]
Length = 217
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 138/232 (59%), Gaps = 22/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 3 KEAALVVFSGGQDSTTCLFWAKREFRKVYALSFLYGQKHQKEVELAREIARKAE------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + +++PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFEVMDVSFIGKLGHNSLTDPDMVMDREKPADSVPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 EKGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G +++LI E+ TCY G G GC CPAC LR++G ++
Sbjct: 173 DELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGLEKYLA 215
>gi|228995353|ref|ZP_04155038.1| hypothetical protein bpmyx0001_59560 [Bacillus pseudomycoides DSM
12442]
gi|228764395|gb|EEM13258.1| hypothetical protein bpmyx0001_59560 [Bacillus pseudomycoides DSM
12442]
Length = 221
Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 148/236 (62%), Gaps = 20/236 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A+++FSGGQDS+TCL WA+ +F VE ++F+Y QR+K+E++C + ++
Sbjct: 1 MYSNDKAIVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAAEIANELG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L +++L ++ ++LT+ ++ + ++ LP+TFV GRN++FL FAA LA
Sbjct: 58 -------IKHTVLDMSLLNQLAPNALTRTDMEITHEECELPSTFVDGRNLLFLSFAAVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++G +IV GVCETD+SGYPDCR ++++ +NL M+ +HTPLMW+ K ETWK+
Sbjct: 111 KQVGAHHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKI 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G + V E++ TCY G G GC CPAC LR+ G + ++ +
Sbjct: 171 ADELGAFEFVR---EKTLTCYNGI------IGNGCGECPACQLRKAGLDTYLQERE 217
>gi|322377476|ref|ZP_08051967.1| ExsB protein [Streptococcus sp. M334]
gi|321281676|gb|EFX58685.1| ExsB protein [Streptococcus sp. M334]
Length = 217
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ +K ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDLEIKQKEGEVPNTFVDGRNHLFLSFAAILAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GMKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGSGCGDCPACHLRQHGLDVYLSQKGE 216
>gi|255693847|ref|ZP_05417522.1| ExsB protein [Bacteroides finegoldii DSM 17565]
gi|260620332|gb|EEX43203.1| ExsB protein [Bacteroides finegoldii DSM 17565]
Length = 219
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 138/235 (58%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 3 REAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVEFAREIARKAE------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + + +PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFDVMDVSFVGQLGHNSLTDTTMVMDQEKPADTVPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHLVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G ++ LI E+ TCY G + G GC CPAC LR++G ++ +
Sbjct: 173 DELG---VLELIRNETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLKSKN 218
>gi|270293085|ref|ZP_06199296.1| ExsB protein [Streptococcus sp. M143]
gi|270279064|gb|EFA24910.1| ExsB protein [Streptococcus sp. M143]
Length = 217
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 143/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + + VE ++F YGQR+ +E++ + K
Sbjct: 2 KRHSALVVFSGGQDSTTCLFWAKEHYKTVEAVTFAYGQRHHLEIQVAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 DIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGSGCGDCPACHLRQHGLDVYLSQKGE 216
>gi|237723138|ref|ZP_04553619.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293372679|ref|ZP_06619061.1| protein ExsB [Bacteroides ovatus SD CMC 3f]
gi|229447660|gb|EEO53451.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292632488|gb|EFF51084.1| protein ExsB [Bacteroides ovatus SD CMC 3f]
Length = 219
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 139/235 (59%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 3 REAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + +++PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFDVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G ++ LI E+ TCY G + G GC CPAC LR++G ++ +
Sbjct: 173 DELG---VLGLIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKYLKSKN 218
>gi|160886302|ref|ZP_02067305.1| hypothetical protein BACOVA_04309 [Bacteroides ovatus ATCC 8483]
gi|260173585|ref|ZP_05759997.1| putative aluminum resistance protein [Bacteroides sp. D2]
gi|298484367|ref|ZP_07002527.1| ExsB protein [Bacteroides sp. D22]
gi|299146794|ref|ZP_07039862.1| ExsB protein [Bacteroides sp. 3_1_23]
gi|315921850|ref|ZP_07918090.1| queuosine biosynthesis protein queC [Bacteroides sp. D2]
gi|156108187|gb|EDO09932.1| hypothetical protein BACOVA_04309 [Bacteroides ovatus ATCC 8483]
gi|298269478|gb|EFI11079.1| ExsB protein [Bacteroides sp. D22]
gi|298517285|gb|EFI41166.1| ExsB protein [Bacteroides sp. 3_1_23]
gi|313695725|gb|EFS32560.1| queuosine biosynthesis protein queC [Bacteroides sp. D2]
Length = 219
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 139/235 (59%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 3 REAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + +++PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFDVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G ++ LI E+ TCY G + G GC CPAC LR++G ++ +
Sbjct: 173 DELG---VLELIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKYLKSKN 218
>gi|127512990|ref|YP_001094187.1| exsB protein [Shewanella loihica PV-4]
gi|167016453|sp|A3QEN0|QUEC_SHELP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|126638285|gb|ABO23928.1| exsB protein [Shewanella loihica PV-4]
Length = 227
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 95/230 (41%), Positives = 144/230 (62%), Gaps = 21/230 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL+++D V ++FDYGQR+ E+ + K +
Sbjct: 3 KAVVVFSGGQDSTTCLIQALNQYDEVHAVTFDYGQRHSEEIATAAKLAKDL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ IL + +L +++ S+LT++ V+ ++ DN LPNTFVPGRNI+FL A AY+L
Sbjct: 54 KVDSHKILDVTVLNELAISALTRDAIPVSNELMDNGLPNTFVPGRNILFLTLAGIYAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR I+A+++A+ GM+ + + TPLMWL K +TW LA
Sbjct: 114 GAESVITGVCETDFSGYPDCRDSFIKAMQSALEQGMDRELKLVTPLMWLNKAQTWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ L+ +++ TCY G G GC +CPAC LR KG ++ +
Sbjct: 174 Y---HSLELVRDQTLTCYNGI------VGSGCGTCPACLLRAKGLNDYLD 214
>gi|163815378|ref|ZP_02206753.1| hypothetical protein COPEUT_01543 [Coprococcus eutactus ATCC 27759]
gi|158449352|gb|EDP26347.1| hypothetical protein COPEUT_01543 [Coprococcus eutactus ATCC 27759]
Length = 230
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 99/243 (40%), Positives = 152/243 (62%), Gaps = 25/243 (10%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K A+++FSGGQDS+TCL WAL ++ +V +SFDYGQR+ +ELEC + K
Sbjct: 7 QNLKNKDEAVVVFSGGQDSTTCLLWALKKYKKVYAVSFDYGQRHALELECAREIADKFG- 65
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFA 119
E HIL +++L ++ +SLT+ V D PN+FV GRN++FL F
Sbjct: 66 ---------VEHHILDMSLLNQLAPNSLTRTDMKVDENAPDEGTPNSFVDGRNMVFLTFV 116
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A + GI++I+ GV ++D+SGYPDCR I+++ T +NL M+ + TPLMW+ K E
Sbjct: 117 AIFAKQRGISDIITGVSQSDFSGYPDCRDIFIKSLNTTLNLAMDYEFDIITPLMWIDKME 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
TWK+A ++GG +++I + + TCY G + G GC CP+C LR+KG +M++KE
Sbjct: 177 TWKMADELGG---LDVIRDMTLTCYNGIK------GEGCGHCPSCKLRKKGYDLYMKYKE 227
Query: 237 KYQ 239
+++
Sbjct: 228 EHK 230
>gi|308049940|ref|YP_003913506.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
gi|307632130|gb|ADN76432.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
Length = 233
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 147/237 (62%), Gaps = 21/237 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A+++FSGGQDS+TCL AL +D V ++FDYGQR+ E+E + ++
Sbjct: 1 MSDKRIAVVVFSGGQDSTTCLVQALTHYDEVHAITFDYGQRHAQEIEVAKTLATEL---- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ ++ +++LG+++ S+LT++ VA ++ DN LPNTFVPGRNI+FL A
Sbjct: 57 -----GVKAHKVMDVSLLGELAISALTRDNIAVANELMDNGLPNTFVPGRNILFLTLAGI 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
AY++G ++ GVCETD+SGYPDCR++ ++A+E A+ LGM+ +T+ TPLMWL K +TW
Sbjct: 112 YAYQVGAQTVITGVCETDFSGYPDCRNEFVQALEKALVLGMDRPLTLATPLMWLDKAQTW 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
LA G + L+ + + TCY G G GC +CPAC LR +G ++
Sbjct: 172 ALADHYG---TLELVRDRTLTCYNGV------LGAGCGTCPACQLRARGLEQYLANR 219
>gi|293397470|ref|ZP_06641722.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
gi|291420049|gb|EFE93326.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
Length = 236
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 93/234 (39%), Positives = 144/234 (61%), Gaps = 25/234 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SA+++FSGGQDS+TCL AL +D V L+FDYGQR+ E++ + KK+
Sbjct: 2 KNKSAVVVFSGGQDSTTCLVKALAEYDSVHCLTFDYGQRHSEEIKIAEQIAKKL------ 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAA 120
++ IL + I+ +++ SSLT+N +++ + +P+TFVPGRNI+FL AA
Sbjct: 56 ---NVSSHKILDVNIINELAISSLTRN-EIEVPEHKKTGSEGIPSTFVPGRNIVFLTLAA 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A+++ +++ GVCETD+SGYPDCR ++A+ A+ LG+ + TPLM L K ET
Sbjct: 112 IYAFQVNAEDVITGVCETDFSGYPDCRDVFVKALNNAVTLGIGKDIRFVTPLMSLNKAET 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
W LA ++G + LI +++ TCY G + +GC C AC+LR +G+ E+
Sbjct: 172 WALADNMG---YLELIRDDTLTCYNGVKS------FGCGKCDACFLRLRGFNEY 216
>gi|164686486|ref|ZP_02210514.1| hypothetical protein CLOBAR_00051 [Clostridium bartlettii DSM
16795]
gi|164604497|gb|EDQ97962.1| hypothetical protein CLOBAR_00051 [Clostridium bartlettii DSM
16795]
Length = 224
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 95/232 (40%), Positives = 144/232 (62%), Gaps = 21/232 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL WAL+RFD+V ++F+Y Q++K+E+EC + K++
Sbjct: 9 AVVVFSGGQDSTTCLFWALERFDKVIAVTFNYNQKHKLEIECAKNIAKELG--------- 59
Query: 71 LGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E HIL + +L ++ ++LT++ + +D LP+TFV GRN++FL FAA LA
Sbjct: 60 -VEHHILDMDLLNQLAPNALTRDDIKIEEGKDGELPSTFVEGRNMVFLTFAAILAKTKNA 118
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+IV GVCETD+SGYPDCR ++++ NL M+ +HTPLMWL K +TW+LA G
Sbjct: 119 RHIVTGVCETDFSGYPDCRDVFVKSLNVTANLAMDYDFVMHTPLMWLDKAQTWELADKYG 178
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ + E++ TCY G G GC CP+C LRQ G + ++ ++
Sbjct: 179 ---KLEYVREKTLTCYNGI------IGDGCGECPSCKLRQHGLETYLKQKEE 221
>gi|226329054|ref|ZP_03804572.1| hypothetical protein PROPEN_02957 [Proteus penneri ATCC 35198]
gi|225202240|gb|EEG84594.1| hypothetical protein PROPEN_02957 [Proteus penneri ATCC 35198]
Length = 247
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 89/233 (38%), Positives = 142/233 (60%), Gaps = 23/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+++FSGGQDS+TCL AL+++D V ++F+YGQR+K E+E V + +
Sbjct: 17 KKTVVVFSGGQDSTTCLIQALEKYDEVHCITFNYGQRHKEEIEVAQKVSQLLGA------ 70
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L +++L +++ SSLT++ + +++++P+TFVPGRNI+FL AA A
Sbjct: 71 ---TAHKVLDVSLLNELAISSLTRDNIPVPDFKESEESDIPSTFVPGRNILFLTLAAIYA 127
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G +++ GVCETD+SGYPDCR + ++A+ A+NLG+ + TPLMWL K ETW L
Sbjct: 128 YQIGAESVITGVCETDFSGYPDCRDEFVKALNHAVNLGIARDIKFITPLMWLDKAETWAL 187
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A ++ + ++ TCY G + G GC C AC+LRQ+G +
Sbjct: 188 AD---YYKKLDFVRHKTLTCYNGIQ------GDGCGECAACHLRQRGLNTYLA 231
>gi|189467207|ref|ZP_03015992.1| hypothetical protein BACINT_03591 [Bacteroides intestinalis DSM
17393]
gi|189435471|gb|EDV04456.1| hypothetical protein BACINT_03591 [Bacteroides intestinalis DSM
17393]
Length = 218
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 139/233 (59%), Gaps = 22/233 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL++FSGGQDS+TCL WA +F V LSF YGQ+++ E+E + +
Sbjct: 3 REVALVVFSGGQDSTTCLFWAKRKFREVVALSFLYGQKHEKEVELAREIAR--------- 53
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
D+ + ++ ++ +G + H+SLT N + + ++ PNTFVPGRN+ FL AA A
Sbjct: 54 -DADVKFEVMDVSFIGKLGHNSLTDNTMVMDQEKPTDSFPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 EHGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++LI ++ TCY G G GC CPAC LR++G ++ +
Sbjct: 173 DELG---VLDLIRNKTLTCYNGIP------GDGCGHCPACKLRREGLEKYLSR 216
>gi|295087937|emb|CBK69460.1| preQ(0) biosynthesis protein QueC [Bacteroides xylanisolvens XB1A]
Length = 219
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 138/235 (58%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 3 REAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + +++PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFDVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G ++ LI E+ TCY G + G GC CPAC LR++G ++ +
Sbjct: 173 DKLG---VLELIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKYLKSKN 218
>gi|295093083|emb|CBK82174.1| preQ(0) biosynthesis protein QueC [Coprococcus sp. ART55/1]
Length = 225
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 97/241 (40%), Positives = 147/241 (60%), Gaps = 22/241 (9%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K A+++FSGGQDS+TCL WAL ++ +V +SFDYGQR+ +ELEC + K
Sbjct: 2 QNLKNKDEAVVVFSGGQDSTTCLLWALKKYKKVYAVSFDYGQRHALELECAKEIADKFG- 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFA 119
E HIL + +L ++ +SLT+ V D PN+FV GRN++FL F
Sbjct: 61 ---------VEHHILDMGLLNQLAPNSLTRTDMKVDENAPDEGTPNSFVDGRNMVFLTFV 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A + GI++I+ GV ++D+SGYPDCR I+++ T +NL M+ + TPLMW+ K E
Sbjct: 112 AIFAKQRGISDIITGVSQSDFSGYPDCRDIFIKSLNTTLNLAMDYEFDIITPLMWIDKME 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TWK+A ++GG +++I + + TCY G + G GC CP+C LR+KG+ + + +
Sbjct: 172 TWKMADELGG---LDVIRDMTLTCYNGIK------GEGCGHCPSCKLRKKGYDLYMKYKE 222
Query: 240 D 240
D
Sbjct: 223 D 223
>gi|237714947|ref|ZP_04545428.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262409102|ref|ZP_06085647.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_22]
gi|294645237|ref|ZP_06722954.1| protein ExsB [Bacteroides ovatus SD CC 2a]
gi|294809854|ref|ZP_06768533.1| protein ExsB [Bacteroides xylanisolvens SD CC 1b]
gi|229444780|gb|EEO50571.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262353313|gb|EEZ02408.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_22]
gi|292639415|gb|EFF57716.1| protein ExsB [Bacteroides ovatus SD CC 2a]
gi|294442940|gb|EFG11728.1| protein ExsB [Bacteroides xylanisolvens SD CC 1b]
Length = 219
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 138/235 (58%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ+++ E+E + +K
Sbjct: 3 REAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVEFAREIARKAE------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E ++ ++ +G + H+SLT + + +++PNTFVPGRN+ FL AA A
Sbjct: 57 ----VEFDVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI ++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 ERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G ++ LI E+ TCY G + G GC CPAC LR++G ++ +
Sbjct: 173 DKLG---VLELIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKYLKSKN 218
>gi|308067861|ref|YP_003869466.1| hypothetical protein PPE_01080 [Paenibacillus polymyxa E681]
gi|305857140|gb|ADM68928.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 227
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 138/233 (59%), Gaps = 20/233 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A+++FSGGQDS+TCL WA F VET++FDYGQR+K E+E + +++
Sbjct: 1 MFANEKAVVVFSGGQDSTTCLFWAKKHFAEVETVTFDYGQRHKQEIEVAAGIARELG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L +++L ++ ++LT+ ++ + Q+ LP+TFV GRN++FL FA LA
Sbjct: 58 -------VPQTVLDMSLLNQLAPNALTRTDIDITQQEGELPSTFVDGRNLLFLSFAGVLA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW +
Sbjct: 111 KQKGARHLITGVCETDFSGYPDCRDSFIKSLNVTLNLSMDYPFVIHTPLMWLNKAETWHM 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A ++ + V + TCY G G GC CPAC LR+ G ++
Sbjct: 171 ADELKAFEFVR---TRTLTCYNGV------IGDGCGECPACKLRRAGLEQYLA 214
>gi|62179067|ref|YP_215484.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62126700|gb|AAX64403.1| putative (aluminum) resistance protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322713528|gb|EFZ05099.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 266
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 37 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 92
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 93 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 147
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 148 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 207
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 208 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 253
>gi|224026023|ref|ZP_03644389.1| hypothetical protein BACCOPRO_02776 [Bacteroides coprophilus DSM
18228]
gi|224019259|gb|EEF77257.1| hypothetical protein BACCOPRO_02776 [Bacteroides coprophilus DSM
18228]
Length = 222
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 137/235 (58%), Gaps = 22/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E + +K
Sbjct: 3 NETALVVFSGGQDSTTCLFWAKKHFKKVYALSFIYGQKHVKEVELAREIARKADVEFA-- 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ ++ +G + +SLT ++ + ++ PNTFVPGRN+ FL AA A
Sbjct: 61 --------VMDVSFIGHLGKNSLTDTSIHMDEEKPADSFPNTFVPGRNLFFLSIAAVHAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI+++V GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K +TW LA
Sbjct: 113 EKGISHLVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAQTWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G +++LI E+ TCY G G GC CPAC LR++G ++ +
Sbjct: 173 DELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGLEKYLQSKN 218
>gi|312864994|ref|ZP_07725222.1| protein ExsB [Streptococcus downei F0415]
gi|311099105|gb|EFQ57321.1| protein ExsB [Streptococcus downei F0415]
Length = 217
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 144/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WAL ++ VE ++F YGQR+ E+E + K +
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWALKNYNHVEAVTFAYGQRHSHEVEVAKGIAKDLE----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
E +L +++LG I++++LT ++ ++ Q+ +PNTFV GRN +FL FAA LA +
Sbjct: 57 -----IEHQVLDMSLLGQITNNALTSDMEIEAQEGQVPNTFVDGRNHLFLSFAAILAKQK 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI++IV GVCETD+SGYPDCR ++++ +NL M + + TPLMWL K ETW+LA
Sbjct: 112 GISDIVTGVCETDFSGYPDCRDAFVKSLNVTLNLAMNYNFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G D V ++ TCY G G GC CPAC LRQ G + + +
Sbjct: 172 LGAFDYVK---GKTLTCYNGI------MGAGCGECPACKLRQHGLDTYLARRGE 216
>gi|168818932|ref|ZP_02830932.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205343967|gb|EDZ30731.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320084729|emb|CBY94520.1| Queuosine biosynthesis protein queC [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 231
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|161504368|ref|YP_001571480.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|189038940|sp|A9MM16|QUEC_SALAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|160865715|gb|ABX22338.1| hypothetical protein SARI_02479 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 231
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 138/232 (59%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARSLALKL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ +L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 54 -GVRAHKMLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMWL K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNRAVNLGMAKDIRFETPLMWLDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G +NL+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWG---KLNLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|113970396|ref|YP_734189.1| queuosine biosynthesis protein QueC [Shewanella sp. MR-4]
gi|123325002|sp|Q0HII5|QUEC_SHESM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|113885080|gb|ABI39132.1| exsB protein [Shewanella sp. MR-4]
Length = 239
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 94/227 (41%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 17 GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
GGQDS+TCL AL +FD V ++FDYGQR++ E+E + K++ + +
Sbjct: 15 GGQDSTTCLIQALTQFDEVHGITFDYGQRHREEIEVAKSLAKRL---------KITSHKV 65
Query: 77 LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG I+
Sbjct: 66 MDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLGAEAIIT 125
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
GVCETD+SGYPDCRHD +RA+E+A+ GM+ + + TPLMWL K +TW LA +
Sbjct: 126 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLEIITPLMWLNKAQTWALADKYQQ---L 182
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+L+ + TCY G G GC CPAC+LR++G ++ + +
Sbjct: 183 DLVRHHTLTCYNGI------VGDGCGECPACHLRKRGLEDYLQNKAE 223
>gi|310780052|ref|YP_003968384.1| preQ(0) biosynthesis protein QueC [Ilyobacter polytropus DSM 2926]
gi|309749375|gb|ADO84036.1| preQ(0) biosynthesis protein QueC [Ilyobacter polytropus DSM 2926]
Length = 222
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 103/242 (42%), Positives = 149/242 (61%), Gaps = 23/242 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M +II K +L+FSGGQDSST L WA +F V LSF+YGQ++ +EL+C + KK
Sbjct: 1 MQNIIDK-DRCVLVFSGGQDSSTLLFWAKKKFKEVIALSFNYGQKHDLELQCAKDICKKY 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLV 117
E HIL + +L ++ ++LT+ V + + LPNTFV GRN+IFL
Sbjct: 60 D----------VEHHILDMGLLSQLAPNALTRTDIKVDKEAPEGGLPNTFVDGRNMIFLT 109
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
FA+ A + I +++ GV ++D+SGYPDCR I++I T ++L M+ + TPLMWL K
Sbjct: 110 FASIFAKQRNINHVITGVSQSDFSGYPDCRDIFIKSISTTLSLAMDYQFVIDTPLMWLDK 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
ETWK+A D+G ++++I E+ TCY G G GC CPAC LR+ G++EFK K
Sbjct: 170 AETWKMADDLG---VLDIIKNETLTCYNGI------IGNGCGECPACKLRKNGYVEFKRK 220
Query: 238 YQ 239
++
Sbjct: 221 FK 222
>gi|307705448|ref|ZP_07642303.1| queuosine biosynthesis protein queC [Streptococcus mitis SK597]
gi|307620983|gb|EFO00065.1| queuosine biosynthesis protein queC [Streptococcus mitis SK597]
Length = 217
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 19/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ HIL +++LG I+ ++LT ++ ++ ++ +PNTFV GRN +FL FAA LA +
Sbjct: 54 --EQGIRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +IV GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+G + + E++ TCY G G GC CPAC+LRQ G + + +
Sbjct: 172 LGAF---DYVREKTLTCYNGI------IGSGCEECPACHLRQHGLDVYLSQKGE 216
>gi|168465550|ref|ZP_02699432.1| ExsB protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195631864|gb|EDX50384.1| ExsB protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
Length = 231
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 135/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNAGGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|16759435|ref|NP_455052.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16763836|ref|NP_459451.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29142793|ref|NP_806135.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|167990440|ref|ZP_02571540.1| ExsB protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168231444|ref|ZP_02656502.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194472229|ref|ZP_03078213.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197247660|ref|YP_002145436.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262901|ref|ZP_03162975.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198243409|ref|YP_002214409.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200391103|ref|ZP_03217714.1| ExsB protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|207855935|ref|YP_002242586.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213027386|ref|ZP_03341833.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
gi|213160787|ref|ZP_03346497.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213425849|ref|ZP_03358599.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213586412|ref|ZP_03368238.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213612961|ref|ZP_03370787.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213645998|ref|ZP_03376051.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850131|ref|ZP_03381029.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289829268|ref|ZP_06546880.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|81416443|sp|Q7CR22|QUEC_SALTY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81499330|sp|Q8XEU3|QUEC_SALTI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764374|sp|B5EXJ5|QUEC_SALA4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764375|sp|B5FKW0|QUEC_SALDC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764376|sp|B5QU45|QUEC_SALEP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|25325301|pir||AB0559 conserved hypothetical protein ybaX [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16418962|gb|AAL19410.1| putative (aluminum) resistance protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16501726|emb|CAD08914.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138425|gb|AAO69995.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194458593|gb|EDX47432.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197211363|gb|ACH48760.1| ExsB protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197241156|gb|EDY23776.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197937925|gb|ACH75258.1| ExsB protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199603548|gb|EDZ02094.1| ExsB protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205330946|gb|EDZ17710.1| ExsB protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333976|gb|EDZ20740.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|206707738|emb|CAR32023.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261245738|emb|CBG23535.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992172|gb|ACY87057.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157066|emb|CBW16550.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911488|dbj|BAJ35462.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226033|gb|EFX51084.1| Queuosine Biosynthesis QueC ATPase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323128775|gb|ADX16205.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|326622158|gb|EGE28503.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|332987404|gb|AEF06387.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 231
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|224539122|ref|ZP_03679661.1| hypothetical protein BACCELL_04024 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519263|gb|EEF88368.1| hypothetical protein BACCELL_04024 [Bacteroides cellulosilyticus
DSM 14838]
Length = 219
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 136/233 (58%), Gaps = 22/233 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL++FSGGQDS+TCL WA F RV LSF YGQ+++ E+E + +K
Sbjct: 3 KEVALVVFSGGQDSTTCLFWAKREFKRVVALSFLYGQKHEKEVELAREIARKADVEFEA- 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ +G + H+SLT + + + PNTFVPGRN+ FL AA A
Sbjct: 62 ---------MDVSFIGKLGHNSLTDTTMLMDQEKPAGSYPNTFVPGRNLFFLSIAAVYAR 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW LA
Sbjct: 113 EHGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWGLA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++LI E+ TCY G + G GC CPAC LR++G ++ ++
Sbjct: 173 DELG---VLDLIRNETLTCYNGIQ------GDGCGHCPACKLRREGLEKYLKQ 216
>gi|161615349|ref|YP_001589314.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167551728|ref|ZP_02345481.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|238911414|ref|ZP_04655251.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|189038941|sp|A9MWC2|QUEC_SALPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|161364713|gb|ABX68481.1| hypothetical protein SPAB_03120 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205323472|gb|EDZ11311.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 231
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|82775647|ref|YP_401994.1| queuosine biosynthesis protein QueC [Shigella dysenteriae Sd197]
gi|309787039|ref|ZP_07681651.1| queuosine biosynthesis protein queC [Shigella dysenteriae 1617]
gi|110816260|sp|Q32JK2|QUEC_SHIDS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81239795|gb|ABB60505.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308924617|gb|EFP70112.1| queuosine biosynthesis protein queC [Shigella dysenteriae 1617]
Length = 231
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 137/232 (59%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM H+ TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKHIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|312964531|ref|ZP_07778787.1| queuosine biosynthesis protein queC [Escherichia coli 2362-75]
gi|312290765|gb|EFR18642.1| queuosine biosynthesis protein queC [Escherichia coli 2362-75]
Length = 231
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWSLA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|163752022|ref|ZP_02159231.1| exsB protein [Shewanella benthica KT99]
gi|161328074|gb|EDP99243.1| exsB protein [Shewanella benthica KT99]
Length = 231
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 144/233 (61%), Gaps = 21/233 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL+++D V ++FDYGQR+ E+E + K++
Sbjct: 3 KAVIVFSGGQDSTTCLIQALEQYDEVHGITFDYGQRHSQEIEVAKELGKRL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L +L + +L +++ S+LT++ V+ + DN LPNTFVPGRNI+FL A AY+L
Sbjct: 54 DLASHKVLDVTMLNELAISALTRDDIAVSNTLMDNGLPNTFVPGRNILFLTLAGIFAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETDYSGYPDCR D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 114 GAEAVITGVCETDYSGYPDCRDDFVKAMASALVQGMDRQLELVTPLMWLNKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ ++L+ +E+ TCY G GC +CPAC LRQ G ++
Sbjct: 174 Y---NSLDLVRDETLTCYN------DIIGSGCGTCPACLLRQTGLDDYLNNKA 217
>gi|312962951|ref|ZP_07777437.1| queuosine biosynthesis protein [Pseudomonas fluorescens WH6]
gi|311282720|gb|EFQ61315.1| queuosine biosynthesis protein [Pseudomonas fluorescens WH6]
Length = 232
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 141/237 (59%), Gaps = 22/237 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A+++FSGGQDS+TCL AL +D V ++FDYGQR+ E+E + +++
Sbjct: 1 MSKKAVMVFSGGQDSTTCLIQALALYDEVHCITFDYGQRHVAEVEVAQKLARQLGA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ +++L +++ SSLT++ + ++LP+TFVPGRNI+FL AA
Sbjct: 57 -----TVHKVMDVSLLNELAISSLTRDNIPVPTVNSSGDSLPSTFVPGRNILFLTLAAIY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AY++ ++ GVCETD+SGYPDCR + ++A+ A+ LGME V + TPLMWL K ETW
Sbjct: 112 AYQVKAETVITGVCETDFSGYPDCRDEFVKALNQALKLGMEYDVRLDTPLMWLNKAETWA 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA D + L+ + + TCY G G GC +C AC LR +G ++++
Sbjct: 172 LAD---YHDALELVRDSTLTCYNGI------IGSGCGNCDACNLRARGLSDYQQNKA 219
>gi|259909245|ref|YP_002649601.1| queuosine biosynthesis protein QueC [Erwinia pyrifoliae Ep1/96]
gi|224964867|emb|CAX56389.1| Queuosine biosynthesis protein [Erwinia pyrifoliae Ep1/96]
gi|283479295|emb|CAY75211.1| Queuosine biosynthesis protein queC ) [Erwinia pyrifoliae DSM
12163]
Length = 231
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 137/233 (58%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIEVAQQLSTSL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ +L + +L +++ SSLT++ A + LP+TFVPGRNI+F FA+ AY
Sbjct: 54 -GVRAHKVLDVTMLNELAVSSLTRDNIPVPAYNPAASGLPSTFVPGRNIVFFTFASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ IV G CETD+SGYPDCR + ++A+ AINLGM + + TPLMWL K ETW LA
Sbjct: 113 QIEAEAIVTGACETDFSGYPDCRDEFVKALNQAINLGMARELRIETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LI ++ TCY G G GC C AC+LR +G E+++
Sbjct: 173 D---YWQQLPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216
>gi|160893111|ref|ZP_02073899.1| hypothetical protein CLOL250_00657 [Clostridium sp. L2-50]
gi|156865194|gb|EDO58625.1| hypothetical protein CLOL250_00657 [Clostridium sp. L2-50]
Length = 226
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 97/243 (39%), Positives = 149/243 (61%), Gaps = 25/243 (10%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K A+++FSGGQDS+TCL WAL ++ +V +SFDYGQ++ ELEC + +K
Sbjct: 2 QNLKNRDEAVVVFSGGQDSTTCLLWALKKYKKVYAVSFDYGQKHIKELECAKKIAEKFG- 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFA 119
E HIL +++L ++ +SLT++ V + PNTFV GRN++FL F
Sbjct: 61 ---------VEHHILDMSLLNQLAPNSLTRSEMKVDENAPEVGTPNTFVDGRNMVFLTFV 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A A + G+++I+ GV ++D+SGYPDCR I+++ T +NL M+ + TPLMW+ K E
Sbjct: 112 AIYAKQKGVSDIITGVSQSDFSGYPDCRDIFIKSLNTTLNLAMDYEFDIITPLMWIDKME 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKE 236
TWKLA ++ D +++I + + TCY G G GC CP+C LR+KG +ME+K+
Sbjct: 172 TWKLADEL---DGLDVIRDMTLTCYNGIP------GEGCGHCPSCKLRKKGYDLYMEYKK 222
Query: 237 KYQ 239
+
Sbjct: 223 NHN 225
>gi|281177615|dbj|BAI53945.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 231
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|187934812|ref|YP_001886173.1| ExsB protein [Clostridium botulinum B str. Eklund 17B]
gi|187722965|gb|ACD24186.1| ExsB protein [Clostridium botulinum B str. Eklund 17B]
Length = 233
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 101/238 (42%), Positives = 146/238 (61%), Gaps = 22/238 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I+ A+++FSGGQDS+TCL WA RF V +SFDY Q++K+ELEC + KK
Sbjct: 11 IVLDKEKAIVVFSGGQDSTTCLFWAKKRFREVIAVSFDYNQKHKLELECARDICKKYD-- 68
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
E HIL L +L ++ +SLT+ V + +PN+FV GRN++FL F A
Sbjct: 69 --------VEHHILDLNLLNQLAPNSLTRQDISVDKDVPKEGVPNSFVDGRNMLFLTFVA 120
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + G+ I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ET
Sbjct: 121 VFAKQRGVNTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQFEILTPLMWINKTET 180
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
WK+A D+G ++N++ EE+ TCY G G GC CPAC LR+ G++EFK++Y
Sbjct: 181 WKMANDLG---VLNIVKEETLTCYNGV------IGNGCGKCPACNLRKNGYLEFKKEY 229
>gi|168261107|ref|ZP_02683080.1| ExsB protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|205350003|gb|EDZ36634.1| ExsB protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 231
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAVYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|315645651|ref|ZP_07898775.1| exsB protein [Paenibacillus vortex V453]
gi|315279129|gb|EFU42439.1| exsB protein [Paenibacillus vortex V453]
Length = 225
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 93/230 (40%), Positives = 141/230 (61%), Gaps = 19/230 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL W +RF VET++FDYGQR+K+E+EC + K
Sbjct: 1 MLKNEKAVVVFSGGQDSTTCLFWTKERFAEVETVTFDYGQRHKLEIECAAQIAK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ + +L +++L ++ ++LT++ + + LP TFV GRN++FL FAA LA
Sbjct: 55 ----EQGVKQTVLDMSLLNQLAPNALTRSDIEIAEGDGLPTTFVDGRNLLFLSFAAVLAK 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G +++ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW+LA
Sbjct: 111 GAGAKHLITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKSETWELA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ + + + + + TCY G + G GC CPAC LR+ G +
Sbjct: 171 DQM---NALEYVRDHTLTCYNGIK------GDGCGECPACKLRKAGLDNY 211
>gi|168240285|ref|ZP_02665217.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194447743|ref|YP_002044490.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205351765|ref|YP_002225566.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|254764377|sp|B5R6V6|QUEC_SALG2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764378|sp|B4T9F0|QUEC_SALHS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194406047|gb|ACF66266.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205271546|emb|CAR36365.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205340377|gb|EDZ27141.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|326626800|gb|EGE33143.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 231
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGTRA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|322614733|gb|EFY11662.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618839|gb|EFY15727.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623546|gb|EFY20385.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629155|gb|EFY25934.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631876|gb|EFY28630.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637387|gb|EFY34089.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642072|gb|EFY38682.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647891|gb|EFY44366.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652366|gb|EFY48721.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653269|gb|EFY49602.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660582|gb|EFY56818.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664734|gb|EFY60927.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669213|gb|EFY65363.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670758|gb|EFY66891.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322679003|gb|EFY75058.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682032|gb|EFY78057.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685139|gb|EFY81136.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192967|gb|EFZ78190.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196951|gb|EFZ82093.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203936|gb|EFZ88953.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206979|gb|EFZ91932.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323214182|gb|EFZ98940.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214494|gb|EFZ99245.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323219164|gb|EGA03661.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323227000|gb|EGA11181.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230182|gb|EGA14302.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233920|gb|EGA18009.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238386|gb|EGA22444.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244073|gb|EGA28082.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246234|gb|EGA30217.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251860|gb|EGA35723.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257856|gb|EGA41535.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261130|gb|EGA44722.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264940|gb|EGA48439.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272503|gb|EGA55910.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 231
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALQLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|310766851|gb|ADP11801.1| queuosine biosynthesis protein QueC [Erwinia sp. Ejp617]
Length = 231
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 137/233 (58%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIEVAQQLSTSL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ +L + +L +++ SSLT++ A + LP+TFVPGRNI+F FA+ AY
Sbjct: 54 -GVRAHKVLDVTMLNELAVSSLTRDNIPVPAYNSAASGLPSTFVPGRNIVFFTFASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ IV G CETD+SGYPDCR + ++A+ AINLGM + + TPLMWL K ETW LA
Sbjct: 113 QIEAEAIVTGACETDFSGYPDCRDEFVKALNQAINLGMARELRIETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LI ++ TCY G G GC C AC+LR +G E+++
Sbjct: 173 D---YWQQLPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216
>gi|238754242|ref|ZP_04615599.1| Queuosine biosynthesis protein queC [Yersinia ruckeri ATCC 29473]
gi|238707489|gb|EEP99849.1| Queuosine biosynthesis protein queC [Yersinia ruckeri ATCC 29473]
Length = 232
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 137/234 (58%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHREEIEVARKLTSQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNN----LPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + + + N LPNTFVPGRNI+FL AA A
Sbjct: 56 ---KAHKVLDVGMLNELAVSSLTRDNIPVPVYEENSVNTLPNTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AINLG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNHAINLGIARDIAFITPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A + LI + TCY G + G GC C AC+LR KG +
Sbjct: 173 ADYYQQ---LELIRHHTLTCYNGVQ------GDGCGECAACHLRAKGLNNYLAN 217
>gi|237730421|ref|ZP_04560902.1| queuosine biosynthesis protein QueC [Citrobacter sp. 30_2]
gi|226905960|gb|EEH91878.1| queuosine biosynthesis protein QueC [Citrobacter sp. 30_2]
Length = 231
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 137/232 (59%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + N +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLSELAVSSLTRDNIPVPDYEPDANGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWG---KLDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|331651382|ref|ZP_08352407.1| ExsB protein [Escherichia coli M718]
gi|331051123|gb|EGI23175.1| ExsB protein [Escherichia coli M718]
Length = 231
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLT 215
>gi|204930537|ref|ZP_03221467.1| ExsB protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204320471|gb|EDZ05674.1| ExsB protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 231
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + PLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFEMPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR KG +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRAKGLNHYLSNKA 218
>gi|194445512|ref|YP_002039698.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|254764379|sp|B4SWU8|QUEC_SALNS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194404175|gb|ACF64397.1| ExsB protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 231
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|168237570|ref|ZP_02662628.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735041|ref|YP_002113486.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|254764382|sp|B4TMD3|QUEC_SALSV RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194710543|gb|ACF89764.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289471|gb|EDY28834.1| ExsB protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 231
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 135/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G + L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LELVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|224582293|ref|YP_002636091.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|110816258|sp|Q57SA8|QUEC_SALCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764380|sp|C0Q7Y0|QUEC_SALPC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|224466820|gb|ACN44650.1| hypothetical protein SPC_0469 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 231
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSNKA 218
>gi|269138354|ref|YP_003295054.1| queuosine biosynthesis protein QueC [Edwardsiella tarda EIB202]
gi|267984014|gb|ACY83843.1| queuosine biosynthesis protein QueC [Edwardsiella tarda EIB202]
gi|304558386|gb|ADM41050.1| Queuosine Biosynthesis QueC ATPase [Edwardsiella tarda FL6-60]
Length = 229
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL R+D V ++FDYGQR++ E++ + K++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALHRYDDVHCITFDYGQRHRAEIDVARRLAKQLGASA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ + + Q ++ +PNTFVPGRN++FL AA AY++
Sbjct: 58 -----HKVLDVGLLNELAISSLTRDNIPVPTQSEDGIPNTFVPGRNVLFLTLAAIYAYQV 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR ++A+ A+ LGM + TPLMWL K ETW LA
Sbjct: 113 EAEAVITGVCETDFSGYPDCRDQFVQALNHAVCLGMARDIRFETPLMWLNKAETWALADY 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G + V ++ TCY G + G GC C AC+LR G ++
Sbjct: 173 YGQLERVR---HDTLTCYNGIQ------GDGCGHCAACHLRAHGLQQYLA 213
>gi|170680140|ref|YP_001742588.1| queuosine biosynthesis protein QueC [Escherichia coli SMS-3-5]
gi|300937061|ref|ZP_07151927.1| ExsB protein [Escherichia coli MS 21-1]
gi|254764344|sp|B1LJK1|QUEC_ECOSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|170517858|gb|ACB16036.1| queuosine biosynthesis protein QueC [Escherichia coli SMS-3-5]
gi|300457892|gb|EFK21385.1| ExsB protein [Escherichia coli MS 21-1]
Length = 231
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|215485525|ref|YP_002327956.1| queuosine biosynthesis protein QueC [Escherichia coli O127:H6 str.
E2348/69]
gi|254764334|sp|B7UJR7|QUEC_ECO27 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|215263597|emb|CAS07927.1| predicted aluminum resistance protein [Escherichia coli O127:H6
str. E2348/69]
Length = 231
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|26246455|ref|NP_752494.1| queuosine biosynthesis protein QueC [Escherichia coli CFT073]
gi|91209518|ref|YP_539504.1| queuosine biosynthesis protein QueC [Escherichia coli UTI89]
gi|110640705|ref|YP_668433.1| queuosine biosynthesis protein QueC [Escherichia coli 536]
gi|117622704|ref|YP_851617.1| queuosine biosynthesis protein QueC [Escherichia coli APEC O1]
gi|191173679|ref|ZP_03035203.1| queuosine biosynthesis protein QueC [Escherichia coli F11]
gi|194435436|ref|ZP_03067614.1| queuosine biosynthesis protein QueC [Shigella dysenteriae 1012]
gi|218557354|ref|YP_002390267.1| queuosine biosynthesis protein QueC [Escherichia coli S88]
gi|218688308|ref|YP_002396520.1| queuosine biosynthesis protein QueC [Escherichia coli ED1a]
gi|218698644|ref|YP_002406273.1| queuosine biosynthesis protein QueC [Escherichia coli IAI39]
gi|218703728|ref|YP_002411247.1| queuosine biosynthesis protein QueC [Escherichia coli UMN026]
gi|227884545|ref|ZP_04002350.1| transcriptional regulator [Escherichia coli 83972]
gi|237707561|ref|ZP_04538042.1| queuosine biosynthesis protein queC [Escherichia sp. 3_2_53FAA]
gi|293403565|ref|ZP_06647656.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1412]
gi|293413699|ref|ZP_06656348.1| exsB protein [Escherichia coli B185]
gi|298379177|ref|ZP_06989058.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1302]
gi|300900515|ref|ZP_07118682.1| ExsB protein [Escherichia coli MS 198-1]
gi|300987956|ref|ZP_07178472.1| ExsB protein [Escherichia coli MS 45-1]
gi|300997367|ref|ZP_07181707.1| ExsB protein [Escherichia coli MS 200-1]
gi|301049651|ref|ZP_07196600.1| ExsB protein [Escherichia coli MS 185-1]
gi|306813088|ref|ZP_07447281.1| queuosine biosynthesis protein QueC [Escherichia coli NC101]
gi|331645629|ref|ZP_08346732.1| ExsB protein [Escherichia coli M605]
gi|331656501|ref|ZP_08357463.1| ExsB protein [Escherichia coli TA206]
gi|331661825|ref|ZP_08362748.1| ExsB protein [Escherichia coli TA143]
gi|331681839|ref|ZP_08382472.1| ExsB protein [Escherichia coli H299]
gi|81478067|sp|Q8FKA4|QUEC_ECOL6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816225|sp|Q1RF91|QUEC_ECOUT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118574284|sp|Q0TKJ7|QUEC_ECOL5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016427|sp|A1A8B3|QUEC_ECOK1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764335|sp|B7MDA3|QUEC_ECO45 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764338|sp|B7NJ50|QUEC_ECO7I RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764339|sp|B7MQG0|QUEC_ECO81 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764342|sp|B7N8Z8|QUEC_ECOLU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|26106853|gb|AAN79038.1|AE016756_221 Hypothetical protein ybaX [Escherichia coli CFT073]
gi|91071092|gb|ABE05973.1| hypothetical protein YbaX [Escherichia coli UTI89]
gi|110342297|gb|ABG68534.1| putative (aluminum) resistance protein [Escherichia coli 536]
gi|115511828|gb|ABI99902.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|190906037|gb|EDV65652.1| queuosine biosynthesis protein QueC [Escherichia coli F11]
gi|194416322|gb|EDX32513.1| queuosine biosynthesis protein QueC [Shigella dysenteriae 1012]
gi|218364123|emb|CAR01788.1| queuosine biosynthesis protein [Escherichia coli S88]
gi|218368630|emb|CAR16369.1| queuosine biosynthesis protein [Escherichia coli IAI39]
gi|218425872|emb|CAR06678.1| queuosine biosynthesis protein [Escherichia coli ED1a]
gi|218430825|emb|CAR11699.1| queuosine biosynthesis protein [Escherichia coli UMN026]
gi|222032239|emb|CAP74978.1| Queuosine biosynthesis protein queC [Escherichia coli LF82]
gi|226898771|gb|EEH85030.1| queuosine biosynthesis protein queC [Escherichia sp. 3_2_53FAA]
gi|227838631|gb|EEJ49097.1| transcriptional regulator [Escherichia coli 83972]
gi|284920254|emb|CBG33313.1| queuosine biosynthesis protein [Escherichia coli 042]
gi|291429418|gb|EFF02438.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1412]
gi|291433757|gb|EFF06730.1| exsB protein [Escherichia coli B185]
gi|294490301|gb|ADE89057.1| queuosine biosynthesis protein QueC [Escherichia coli IHE3034]
gi|298280290|gb|EFI21794.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1302]
gi|300298588|gb|EFJ54973.1| ExsB protein [Escherichia coli MS 185-1]
gi|300304186|gb|EFJ58706.1| ExsB protein [Escherichia coli MS 200-1]
gi|300355996|gb|EFJ71866.1| ExsB protein [Escherichia coli MS 198-1]
gi|300407626|gb|EFJ91164.1| ExsB protein [Escherichia coli MS 45-1]
gi|305853851|gb|EFM54290.1| queuosine biosynthesis protein QueC [Escherichia coli NC101]
gi|307552351|gb|ADN45126.1| queuosine biosynthesis protein QueC [Escherichia coli ABU 83972]
gi|307628086|gb|ADN72390.1| queuosine biosynthesis protein QueC [Escherichia coli UM146]
gi|312945022|gb|ADR25849.1| queuosine biosynthesis protein QueC [Escherichia coli O83:H1 str.
NRG 857C]
gi|315289838|gb|EFU49228.1| ExsB protein [Escherichia coli MS 110-3]
gi|315294222|gb|EFU53573.1| ExsB protein [Escherichia coli MS 153-1]
gi|315299543|gb|EFU58791.1| ExsB protein [Escherichia coli MS 16-3]
gi|320178274|gb|EFW53248.1| Queuosine Biosynthesis QueC ATPase [Shigella boydii ATCC 9905]
gi|320197082|gb|EFW71701.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli WV_060327]
gi|323191364|gb|EFZ76627.1| queuosine biosynthesis protein queC [Escherichia coli RN587/1]
gi|323952944|gb|EGB48812.1| exsB protein [Escherichia coli H252]
gi|323958637|gb|EGB54340.1| exsB protein [Escherichia coli H263]
gi|324010075|gb|EGB79294.1| ExsB protein [Escherichia coli MS 57-2]
gi|324010658|gb|EGB79877.1| ExsB protein [Escherichia coli MS 60-1]
gi|330910238|gb|EGH38748.1| queuosine Biosynthesis QueC ATPase [Escherichia coli AA86]
gi|331044381|gb|EGI16508.1| ExsB protein [Escherichia coli M605]
gi|331054749|gb|EGI26758.1| ExsB protein [Escherichia coli TA206]
gi|331060247|gb|EGI32211.1| ExsB protein [Escherichia coli TA143]
gi|331081041|gb|EGI52206.1| ExsB protein [Escherichia coli H299]
gi|332085803|gb|EGI90967.1| queuosine biosynthesis protein queC [Shigella dysenteriae 155-74]
gi|332094600|gb|EGI99646.1| queuosine biosynthesis protein queC [Shigella boydii 5216-82]
Length = 231
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|157146939|ref|YP_001454258.1| queuosine biosynthesis protein QueC [Citrobacter koseri ATCC
BAA-895]
gi|167016423|sp|A8AK09|QUEC_CITK8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157084144|gb|ABV13822.1| hypothetical protein CKO_02716 [Citrobacter koseri ATCC BAA-895]
Length = 231
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLSELAVSSLTRDNIPVPDYEPDADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+ LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVTLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWG---KLDLVREETLTCYNGIK------GDGCGQCAACNLRANGLNHYLA 215
>gi|317498352|ref|ZP_07956648.1| exsB protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894357|gb|EFV16543.1| exsB protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 221
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 138/235 (58%), Gaps = 22/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA ++D V LSF+YGQR+ ELEC + K
Sbjct: 1 MAKPNKAVVVFSGGQDSTTCLFWAKKKYDEVIALSFNYGQRHSKELECAKKICK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ E HIL + +L ++ +SLT+ V + + PN+FV GRN++FL FAA
Sbjct: 55 ----EHGVEHHILDMGLLNQLAPNSLTRVDMEVDHEAPEEGTPNSFVDGRNMLFLTFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K +TW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFISSLETTLTLAMDYEFEVITPLMWIDKKQTW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++A +G D+V E+ TCY G G GC CPAC LR+ G E+ +
Sbjct: 171 EMADKLGVFDIVR---NETLTCYNGV------MGDGCGECPACKLRRHGLEEYLK 216
>gi|322805870|emb|CBZ03435.1| queuosine Biosynthesis QueC ATPase [Clostridium botulinum H04402
065]
Length = 219
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 142/234 (60%), Gaps = 22/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C + KK
Sbjct: 3 KEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A
Sbjct: 57 ----IEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 113 QKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF+++Y
Sbjct: 173 YDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKEY 217
>gi|300924171|ref|ZP_07140163.1| ExsB protein [Escherichia coli MS 182-1]
gi|301330689|ref|ZP_07223291.1| ExsB protein [Escherichia coli MS 78-1]
gi|300419624|gb|EFK02935.1| ExsB protein [Escherichia coli MS 182-1]
gi|300843350|gb|EFK71110.1| ExsB protein [Escherichia coli MS 78-1]
Length = 231
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|24111828|ref|NP_706338.1| queuosine biosynthesis protein QueC [Shigella flexneri 2a str. 301]
gi|30061946|ref|NP_836117.1| queuosine biosynthesis protein QueC [Shigella flexneri 2a str.
2457T]
gi|74311024|ref|YP_309443.1| queuosine biosynthesis protein QueC [Shigella sonnei Ss046]
gi|82542932|ref|YP_406879.1| queuosine biosynthesis protein QueC [Shigella boydii Sb227]
gi|157156536|ref|YP_001461631.1| queuosine biosynthesis protein QueC [Escherichia coli E24377A]
gi|157159971|ref|YP_001457289.1| queuosine biosynthesis protein QueC [Escherichia coli HS]
gi|187730250|ref|YP_001879155.1| queuosine biosynthesis protein QueC [Shigella boydii CDC 3083-94]
gi|188491966|ref|ZP_02999236.1| queuosine biosynthesis protein QueC [Escherichia coli 53638]
gi|191168270|ref|ZP_03030064.1| queuosine biosynthesis protein QueC [Escherichia coli B7A]
gi|193064187|ref|ZP_03045271.1| queuosine biosynthesis protein QueC [Escherichia coli E22]
gi|193067732|ref|ZP_03048699.1| queuosine biosynthesis protein QueC [Escherichia coli E110019]
gi|194429020|ref|ZP_03061552.1| queuosine biosynthesis protein QueC [Escherichia coli B171]
gi|209917661|ref|YP_002291745.1| queuosine biosynthesis protein QueC [Escherichia coli SE11]
gi|260842645|ref|YP_003220423.1| putative aluminum resistance protein [Escherichia coli O103:H2 str.
12009]
gi|293418515|ref|ZP_06660950.1| exsB protein [Escherichia coli B088]
gi|300818224|ref|ZP_07098435.1| ExsB protein [Escherichia coli MS 107-1]
gi|300820310|ref|ZP_07100462.1| ExsB protein [Escherichia coli MS 119-7]
gi|300903288|ref|ZP_07121216.1| ExsB protein [Escherichia coli MS 84-1]
gi|301301595|ref|ZP_07207730.1| ExsB protein [Escherichia coli MS 124-1]
gi|307312178|ref|ZP_07591814.1| exsB protein [Escherichia coli W]
gi|309794823|ref|ZP_07689244.1| ExsB protein [Escherichia coli MS 145-7]
gi|312970541|ref|ZP_07784722.1| queuosine biosynthesis protein queC [Escherichia coli 1827-70]
gi|331666800|ref|ZP_08367674.1| ExsB protein [Escherichia coli TA271]
gi|331676116|ref|ZP_08376828.1| ExsB protein [Escherichia coli H591]
gi|81723704|sp|Q83M51|QUEC_SHIFL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816259|sp|Q325F7|QUEC_SHIBS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816261|sp|Q3Z4V4|QUEC_SHISS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016425|sp|A7ZIK2|QUEC_ECO24 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016426|sp|A7ZXA2|QUEC_ECOHS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764343|sp|B6HZQ1|QUEC_ECOSE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764385|sp|B2U4P9|QUEC_SHIB3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24050620|gb|AAN42045.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30040190|gb|AAP15923.1| hypothetical protein S0395 [Shigella flexneri 2a str. 2457T]
gi|73854501|gb|AAZ87208.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81244343|gb|ABB65051.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|157065651|gb|ABV04906.1| queuosine biosynthesis protein QueC [Escherichia coli HS]
gi|157078566|gb|ABV18274.1| queuosine biosynthesis protein QueC [Escherichia coli E24377A]
gi|187427242|gb|ACD06516.1| queuosine biosynthesis protein QueC [Shigella boydii CDC 3083-94]
gi|188487165|gb|EDU62268.1| queuosine biosynthesis protein QueC [Escherichia coli 53638]
gi|190901730|gb|EDV61485.1| queuosine biosynthesis protein QueC [Escherichia coli B7A]
gi|192929216|gb|EDV82826.1| queuosine biosynthesis protein QueC [Escherichia coli E22]
gi|192959144|gb|EDV89580.1| queuosine biosynthesis protein QueC [Escherichia coli E110019]
gi|194412957|gb|EDX29247.1| queuosine biosynthesis protein QueC [Escherichia coli B171]
gi|209910920|dbj|BAG75994.1| conserved hypothetical protein [Escherichia coli SE11]
gi|257757792|dbj|BAI29289.1| predicted aluminum resistance protein [Escherichia coli O103:H2
str. 12009]
gi|281599784|gb|ADA72768.1| Queuosine biosynthesis protein queC [Shigella flexneri 2002017]
gi|291325043|gb|EFE64458.1| exsB protein [Escherichia coli B088]
gi|300404583|gb|EFJ88121.1| ExsB protein [Escherichia coli MS 84-1]
gi|300527095|gb|EFK48164.1| ExsB protein [Escherichia coli MS 119-7]
gi|300529115|gb|EFK50177.1| ExsB protein [Escherichia coli MS 107-1]
gi|300843092|gb|EFK70852.1| ExsB protein [Escherichia coli MS 124-1]
gi|306907680|gb|EFN38182.1| exsB protein [Escherichia coli W]
gi|308121476|gb|EFO58738.1| ExsB protein [Escherichia coli MS 145-7]
gi|310337190|gb|EFQ02328.1| queuosine biosynthesis protein queC [Escherichia coli 1827-70]
gi|313646929|gb|EFS11386.1| queuosine biosynthesis protein queC [Shigella flexneri 2a str.
2457T]
gi|315059724|gb|ADT74051.1| predicted aluminum resistance protein [Escherichia coli W]
gi|315256272|gb|EFU36240.1| ExsB protein [Escherichia coli MS 85-1]
gi|320186074|gb|EFW60819.1| Queuosine Biosynthesis QueC ATPase [Shigella flexneri CDC 796-83]
gi|320201688|gb|EFW76264.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli EC4100B]
gi|323160445|gb|EFZ46393.1| queuosine biosynthesis protein queC [Escherichia coli E128010]
gi|323164247|gb|EFZ50054.1| queuosine biosynthesis protein queC [Shigella sonnei 53G]
gi|323170531|gb|EFZ56181.1| queuosine biosynthesis protein queC [Escherichia coli LT-68]
gi|323184725|gb|EFZ70096.1| queuosine biosynthesis protein queC [Escherichia coli 1357]
gi|323379711|gb|ADX51979.1| exsB protein [Escherichia coli KO11]
gi|323938630|gb|EGB34879.1| exsB protein [Escherichia coli E1520]
gi|323945350|gb|EGB41406.1| exsB protein [Escherichia coli H120]
gi|324016695|gb|EGB85914.1| ExsB protein [Escherichia coli MS 117-3]
gi|324116932|gb|EGC10845.1| exsB protein [Escherichia coli E1167]
gi|331066024|gb|EGI37908.1| ExsB protein [Escherichia coli TA271]
gi|331076174|gb|EGI47456.1| ExsB protein [Escherichia coli H591]
gi|332098666|gb|EGJ03632.1| queuosine biosynthesis protein queC [Shigella boydii 3594-74]
gi|332341808|gb|AEE55142.1| queuosine biosynthesis protein QueC [Escherichia coli UMNK88]
gi|332760735|gb|EGJ91023.1| queuosine biosynthesis protein queC [Shigella flexneri 4343-70]
gi|332761453|gb|EGJ91735.1| queuosine biosynthesis protein queC [Shigella flexneri 2747-71]
gi|332763743|gb|EGJ93981.1| queuosine biosynthesis protein queC [Shigella flexneri K-671]
gi|332768366|gb|EGJ98550.1| 7-cyano-7-deazaguanine synthase [Shigella flexneri 2930-71]
gi|333008015|gb|EGK27491.1| queuosine biosynthesis protein queC [Shigella flexneri K-218]
gi|333008130|gb|EGK27605.1| queuosine biosynthesis protein queC [Shigella flexneri VA-6]
gi|333010905|gb|EGK30331.1| queuosine biosynthesis protein queC [Shigella flexneri K-272]
gi|333020707|gb|EGK39967.1| queuosine biosynthesis protein queC [Shigella flexneri K-227]
gi|333021903|gb|EGK41151.1| queuosine biosynthesis protein queC [Shigella flexneri K-304]
Length = 231
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|256020416|ref|ZP_05434281.1| queuosine biosynthesis protein QueC [Shigella sp. D9]
gi|332281595|ref|ZP_08394008.1| aluminum resistance protein [Shigella sp. D9]
gi|332103947|gb|EGJ07293.1| aluminum resistance protein [Shigella sp. D9]
Length = 231
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|291561059|emb|CBL39859.1| preQ(0) biosynthesis protein QueC [butyrate-producing bacterium
SSC/2]
Length = 221
Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 138/235 (58%), Gaps = 22/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA ++D V LSF+YGQR+ ELEC + K
Sbjct: 1 MAKPNKAVVVFSGGQDSTTCLFWAKKKYDEVIALSFNYGQRHSKELECAKKICK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ E HIL + +L ++ +SLT+ V + + PN+FV GRN++FL FAA
Sbjct: 55 ----EHGVEHHILDMGLLNQLAPNSLTRVDMEVDHEAPEEGTPNSFVDGRNMLFLTFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K +TW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFISSLETTLTLAMDYEFEVITPLMWIDKKQTW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++A +G D+V E+ TCY G G GC CPAC LR+ G E+ +
Sbjct: 171 EMADKLGVFDIVK---NETLTCYNGV------MGDGCGECPACKLRRHGLEEYLK 216
>gi|261346357|ref|ZP_05974001.1| ExsB protein [Providencia rustigianii DSM 4541]
gi|282565671|gb|EFB71206.1| ExsB protein [Providencia rustigianii DSM 4541]
Length = 231
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 138/236 (58%), Gaps = 23/236 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALKHYDEVHCITFDYGQRHRLEIEVAQKLSLQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + + LP+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKVLDVTLLSELAISSLTRDNIPVPDFKESEASGLPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++++ A++LG+ + TPLMWL K +TW L
Sbjct: 113 YQVQAEAVITGVCETDFSGYPDCRDEFVKSLNHAVSLGLAKDIRFETPLMWLDKAQTWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A G + I +++ TCY G + G GC C AC+LR KG + Q
Sbjct: 173 ADHYGH---LETIRQQTLTCYNGIQ------GDGCGECAACHLRSKGLNYYLSNKQ 219
>gi|167768060|ref|ZP_02440113.1| hypothetical protein CLOSS21_02604 [Clostridium sp. SS2/1]
gi|167710389|gb|EDS20968.1| hypothetical protein CLOSS21_02604 [Clostridium sp. SS2/1]
Length = 221
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 138/235 (58%), Gaps = 22/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA ++D V LSF+YGQR+ ELEC + K
Sbjct: 1 MAKPNKAVVVFSGGQDSTTCLFWAKKKYDEVIALSFNYGQRHSKELECAKKICK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ E HIL + +L ++ +SLT+ V + + PN+FV GRN++FL FAA
Sbjct: 55 ----EHGVEHHILDMGLLNQLAPNSLTRVDMEVDHEAPEEGTPNSFVDGRNMLFLTFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K +TW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFISSLETTLTLAMDYEFEVITPLMWIDKKQTW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++A +G D+V E+ TCY G G GC CPAC LR+ G E+ +
Sbjct: 171 EMADKLGVFDIVK---NETLTCYNGV------MGDGCGECPACKLRRHGLEEYLK 216
>gi|331671990|ref|ZP_08372786.1| ExsB protein [Escherichia coli TA280]
gi|331070979|gb|EGI42338.1| ExsB protein [Escherichia coli TA280]
Length = 231
Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ K + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYKPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|301022562|ref|ZP_07186434.1| ExsB protein [Escherichia coli MS 69-1]
gi|300397443|gb|EFJ80981.1| ExsB protein [Escherichia coli MS 69-1]
gi|324114671|gb|EGC08639.1| exsB protein [Escherichia fergusonii B253]
Length = 231
Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLHHYLA 215
>gi|168182490|ref|ZP_02617154.1| protein ExsB [Clostridium botulinum Bf]
gi|237794900|ref|YP_002862452.1| exsB protein [Clostridium botulinum Ba4 str. 657]
gi|259551497|sp|C3KVW4|QUEC_CLOB6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|182674375|gb|EDT86336.1| protein ExsB [Clostridium botulinum Bf]
gi|229261676|gb|ACQ52709.1| exsB protein [Clostridium botulinum Ba4 str. 657]
Length = 219
Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 141/234 (60%), Gaps = 22/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+ELEC + KK
Sbjct: 3 KEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELECAKDICKKYN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E IL L +L ++ +SLT+ V +PN+FV GRN++FL F A A
Sbjct: 57 ----IEHKILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 113 QRGINAIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEILTPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF+++Y
Sbjct: 173 YDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKEY 217
>gi|293408594|ref|ZP_06652433.1| exsB protein [Escherichia coli B354]
gi|291471772|gb|EFF14255.1| exsB protein [Escherichia coli B354]
Length = 231
Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ K + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYKPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|322834039|ref|YP_004214066.1| exsB protein [Rahnella sp. Y9602]
gi|321169240|gb|ADW74939.1| exsB protein [Rahnella sp. Y9602]
Length = 232
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 139/233 (59%), Gaps = 23/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALKQYDEVHCVTFDYGQRHRAEIEIAQKLSVELGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMK----IQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + + LP+TFVPGRNI+FL AA A
Sbjct: 58 -----HKVLDVGLLNELAVSSLTRDNIPVPNFGDENNGGLPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ TA++LG+ V TPLMWL K ETW L
Sbjct: 113 YQIQAEAVITGVCETDFSGYPDCRDEFVKALNTAVSLGLARDVRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A ++L+ ++ TCY G G GC C AC+LR G ++++
Sbjct: 173 ADYYQQ---LDLVRHKTLTCYNGI------AGDGCGECAACHLRANGLQQYQQ 216
>gi|270263577|ref|ZP_06191846.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
gi|270042461|gb|EFA15556.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
Length = 232
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 90/237 (37%), Positives = 135/237 (56%), Gaps = 23/237 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIEVAQALSVALGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ Q+ LP+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKVLDVGLLNELAISSLTRDSIPVPAYNNEQEGGLPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ A+ LG+ + TPLMWL K ETW L
Sbjct: 113 YQVEAEAVITGVCETDFSGYPDCRDEFVKALNHAVVLGIARDIRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A D V +++ TCY G + G GC C AC+LR G +++ +
Sbjct: 173 ADYYQQLDRVR---QDTLTCYNGIQ------GDGCGECAACHLRANGLKQYQINKAE 220
>gi|117920608|ref|YP_869800.1| queuosine biosynthesis protein QueC [Shewanella sp. ANA-3]
gi|189029564|sp|A0KX75|QUEC_SHESA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|117612940|gb|ABK48394.1| exsB protein [Shewanella sp. ANA-3]
Length = 239
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 94/227 (41%), Positives = 144/227 (63%), Gaps = 21/227 (9%)
Query: 17 GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
GGQDS+TCL AL +FD V ++FDYGQR++ E+E + K++ + +
Sbjct: 15 GGQDSTTCLIQALTQFDEVHGITFDYGQRHREEIEVAKSLAKRL---------KITSHKV 65
Query: 77 LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG I+
Sbjct: 66 IDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLGAGAIIT 125
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
GVCETD+SGYPDCRHD +RA+E+A+ GM+ + + TPLMWL K +TW LA +
Sbjct: 126 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLEIITPLMWLNKAQTWALADKYQQ---L 182
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+L+ + TCY G G GC +CPAC+LR++G ++ + +
Sbjct: 183 DLVRHHTLTCYNGI------VGDGCGACPACHLRKRGLEDYLQNKAE 223
>gi|293392538|ref|ZP_06636858.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
gi|291424940|gb|EFE98149.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
Length = 232
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 90/237 (37%), Positives = 138/237 (58%), Gaps = 23/237 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + +
Sbjct: 2 RRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVAQELSHSLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMK----IQDNNLPNTFVPGRNIIFLVFAATLA 123
IL + +L +++ SSLT++ + + + LP+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKILDVGLLNELAISSLTRDNIPVPAFGSETEGGLPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW L
Sbjct: 113 YQVEAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A ++ I +++ TCY G + G GC C AC+LR G +++ + D
Sbjct: 173 AD---YYHQLDRIRQDTLTCYNGIK------GDGCGECAACHLRANGLTQYQSRQAD 220
>gi|283834237|ref|ZP_06353978.1| ExsB protein [Citrobacter youngae ATCC 29220]
gi|291069754|gb|EFE07863.1| ExsB protein [Citrobacter youngae ATCC 29220]
Length = 231
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + N +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLSELAVSSLTRDNIPVPDYEPDANGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWG---KLDLVRAETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|145298761|ref|YP_001141602.1| hypothetical protein ASA_1775 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|254764293|sp|A4SLT2|QUEC_AERS4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|142851533|gb|ABO89854.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 237
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 142/231 (61%), Gaps = 21/231 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E+E + +
Sbjct: 4 KKAVVVFSGGQDSTTCLVQALAHYDEVHAITFDYGQRHREEIETARRLATQF-------- 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ S+LT++ V+ ++QDN LPNTFVPGRNI+FL A+ AY+
Sbjct: 56 -GIAAHKVMDVTLLNELAVSALTRDEIPVSGELQDNGLPNTFVPGRNILFLTLASIYAYQ 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++++ A++LG++ + TPLMWL K ETW LA
Sbjct: 115 VGAEAVITGVCETDFSGYPDCRDEFVKSLNQAVSLGLDRCIRFETPLMWLDKAETWALAD 174
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G + + +++ TCY G G GC +CPAC LR +G +
Sbjct: 175 YYGH---LETVRQQTLTCYNGI------AGDGCGTCPACELRSRGLDLYLA 216
>gi|317047182|ref|YP_004114830.1| exsB protein [Pantoea sp. At-9b]
gi|316948799|gb|ADU68274.1| exsB protein [Pantoea sp. At-9b]
Length = 231
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 139/233 (59%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + +K+
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHREEIEVAAELAQKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ A + LP+TFVPGRNI+FL A+ AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDNIPVPAYDPDASGLPSTFVPGRNILFLTLASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM H+ TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNNAVSLGMARHIRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ L+ E+ TCY G + G GC C AC+LR +G +++
Sbjct: 173 D---YWQQLPLVRAETLTCYNGIK------GDGCGECAACHLRARGLTDYQAN 216
>gi|261822500|ref|YP_003260606.1| queuosine biosynthesis protein QueC [Pectobacterium wasabiae
WPP163]
gi|261606513|gb|ACX88999.1| exsB protein [Pectobacterium wasabiae WPP163]
Length = 231
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 93/232 (40%), Positives = 137/232 (59%), Gaps = 24/232 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E+E + +K+
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQHYDDVHCITFDYGQRHRAEIEVAQELSQKLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
IL + +L +++ SSLT++ ++ + D +PNTFVPGRNI+FL A+ A
Sbjct: 56 ---TAHKILDVGLLNELATSSLTRD-SIPVPDYDANAQGIPNTFVPGRNILFLTLASIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G ++ GVCETD+SGYPDCR + ++A+ AI LG+ ++ TPLMWL K ETW L
Sbjct: 112 YQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARNIRFETPLMWLNKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A D V + TCY G + G GC C AC+LR G +++
Sbjct: 172 ADYYQQLDTVRY---HTLTCYNGIQ------GDGCGQCAACHLRANGLAQYQ 214
>gi|172058908|ref|YP_001815368.1| exsB protein [Exiguobacterium sibiricum 255-15]
gi|254764347|sp|B1YFM6|QUEC_EXIS2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|171991429|gb|ACB62351.1| exsB protein [Exiguobacterium sibiricum 255-15]
Length = 218
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 139/234 (59%), Gaps = 20/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K AL++FSGGQDS+TCL AL + VE ++F+YGQR+ EL+ + ++
Sbjct: 2 KNERALVVFSGGQDSTTCLFQALADYSEVEVVTFNYGQRHAAELDVAREITSELG----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNV-AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ H L L++L ++ +SLT + ++ ++ LP+TFV GRN +FL FAA LA
Sbjct: 57 -----VKHHELDLSLLSQLTSNSLTDHSQSITTNEDGLPSTFVDGRNHLFLSFAAVLAKG 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLMWL K ETW LA
Sbjct: 112 RGIRHIITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKKETWALAD 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G D V + + TCY G G GC CPAC LR+KG + E+ Q
Sbjct: 172 SLGAFDFVR---KRTLTCYNGI------IGDGCGDCPACELRKKGLDAYIEEVQ 216
>gi|114047412|ref|YP_737962.1| queuosine biosynthesis protein QueC [Shewanella sp. MR-7]
gi|122944692|sp|Q0HVF0|QUEC_SHESR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|113888854|gb|ABI42905.1| exsB protein [Shewanella sp. MR-7]
Length = 239
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 94/227 (41%), Positives = 143/227 (62%), Gaps = 21/227 (9%)
Query: 17 GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
GGQDS+TCL AL +FD V ++FDYGQR++ E+E + K++ + +
Sbjct: 15 GGQDSTTCLIQALTQFDEVHGITFDYGQRHREEIEVAKSLAKRL---------KITSHKV 65
Query: 77 LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG I+
Sbjct: 66 MDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIFAYQLGAEAIIT 125
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
GVCETD+SGYPDCRHD +RA+E+A+ GM+ + + TPLMWL K +TW LA +
Sbjct: 126 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLEIITPLMWLNKAQTWALADKYQQ---L 182
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+L+ + TCY G G GC CPAC+LR++G ++ + +
Sbjct: 183 DLVRHHTLTCYNGI------VGDGCGDCPACHLRKRGLEDYLQNKAE 223
>gi|212694007|ref|ZP_03302135.1| hypothetical protein BACDOR_03532 [Bacteroides dorei DSM 17855]
gi|237710328|ref|ZP_04540809.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237723866|ref|ZP_04554347.1| queuosine biosynthesis protein queC [Bacteroides sp. D4]
gi|294778361|ref|ZP_06743784.1| protein ExsB [Bacteroides vulgatus PC510]
gi|212663539|gb|EEB24113.1| hypothetical protein BACDOR_03532 [Bacteroides dorei DSM 17855]
gi|229437692|gb|EEO47769.1| queuosine biosynthesis protein queC [Bacteroides dorei 5_1_36/D4]
gi|229455790|gb|EEO61511.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|294447623|gb|EFG16200.1| protein ExsB [Bacteroides vulgatus PC510]
Length = 223
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 138/235 (58%), Gaps = 23/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K+ AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E + K
Sbjct: 1 MNKSD-ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARAIAGKAG--- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E + ++ +G++ +SLT + ++ PNTFVPGRN+ FL AA
Sbjct: 57 -------VEFKAMDVSFIGNLGKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAV 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A LGI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW
Sbjct: 110 YARELGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETW 169
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA ++G +++LI E+ TCY G + G GC CPAC LR++G ++ E
Sbjct: 170 ALADELG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215
>gi|254883022|ref|ZP_05255732.1| queuosine biosynthesis protein queC [Bacteroides sp. 4_3_47FAA]
gi|319641866|ref|ZP_07996543.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_1_40A]
gi|254835815|gb|EET16124.1| queuosine biosynthesis protein queC [Bacteroides sp. 4_3_47FAA]
gi|317386539|gb|EFV67441.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_1_40A]
Length = 223
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 138/235 (58%), Gaps = 23/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K+ AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E + K
Sbjct: 1 MNKSD-ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARVIAGKAG--- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E + ++ +G++ +SLT + ++ PNTFVPGRN+ FL AA
Sbjct: 57 -------VEFKAMDVSFIGNLGKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAV 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A LGI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW
Sbjct: 110 YARELGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWINKAETW 169
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA ++G +++LI E+ TCY G + G GC CPAC LR++G ++ E
Sbjct: 170 ALADELG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215
>gi|309700705|emb|CBJ00001.1| queuosine biosynthesis protein [Escherichia coli ETEC H10407]
Length = 231
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRASGLNHYLA 215
>gi|16128429|ref|NP_414978.1| required for 7-cyano-7-deazaguanine (preQ0) synthesis [Escherichia
coli str. K-12 substr. MG1655]
gi|89107314|ref|AP_001094.1| predicted aluminum resistance protein [Escherichia coli str. K-12
substr. W3110]
gi|170080030|ref|YP_001729350.1| enzyme in preQ0 biosynthesis [Escherichia coli str. K-12 substr.
DH10B]
gi|238899732|ref|YP_002925528.1| putative aluminum resistance protein [Escherichia coli BW2952]
gi|256023937|ref|ZP_05437802.1| queuosine biosynthesis protein QueC [Escherichia sp. 4_1_40B]
gi|260853667|ref|YP_003227558.1| putative aluminum resistance protein [Escherichia coli O26:H11 str.
11368]
gi|260866605|ref|YP_003233007.1| putative aluminum resistance protein [Escherichia coli O111:H- str.
11128]
gi|300947903|ref|ZP_07162051.1| ExsB protein [Escherichia coli MS 116-1]
gi|300958012|ref|ZP_07170176.1| ExsB protein [Escherichia coli MS 175-1]
gi|301025651|ref|ZP_07189171.1| ExsB protein [Escherichia coli MS 196-1]
gi|301647370|ref|ZP_07247182.1| ExsB protein [Escherichia coli MS 146-1]
gi|307137089|ref|ZP_07496445.1| queuosine biosynthesis protein QueC [Escherichia coli H736]
gi|331640964|ref|ZP_08342099.1| ExsB protein [Escherichia coli H736]
gi|2495537|sp|P77756|QUEC_ECOLI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764341|sp|B1XFN2|QUEC_ECODH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|259551522|sp|C4ZTK1|QUEC_ECOBW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|1580715|dbj|BAA11648.1| YbaX [Escherichia coli W3110]
gi|1773128|gb|AAB40200.1| similar to H. influenzae HI1191 [Escherichia coli]
gi|1786648|gb|AAC73547.1| required for 7-cyano-7-deazaguanine (preQ0) synthesis [Escherichia
coli str. K-12 substr. MG1655]
gi|85674584|dbj|BAE76224.1| predicted aluminum resistance protein [Escherichia coli str. K12
substr. W3110]
gi|169887865|gb|ACB01572.1| enzyme in preQ0 biosynthesis [Escherichia coli str. K-12 substr.
DH10B]
gi|238862146|gb|ACR64144.1| predicted aluminum resistance protein [Escherichia coli BW2952]
gi|257752316|dbj|BAI23818.1| predicted aluminum resistance protein [Escherichia coli O26:H11
str. 11368]
gi|257762961|dbj|BAI34456.1| predicted aluminum resistance protein [Escherichia coli O111:H-
str. 11128]
gi|260450369|gb|ACX40791.1| exsB protein [Escherichia coli DH1]
gi|299880032|gb|EFI88243.1| ExsB protein [Escherichia coli MS 196-1]
gi|300315279|gb|EFJ65063.1| ExsB protein [Escherichia coli MS 175-1]
gi|300452503|gb|EFK16123.1| ExsB protein [Escherichia coli MS 116-1]
gi|301074515|gb|EFK89321.1| ExsB protein [Escherichia coli MS 146-1]
gi|315135126|dbj|BAJ42285.1| queuosine biosynthesis protein QueC [Escherichia coli DH1]
gi|315616615|gb|EFU97232.1| queuosine biosynthesis protein queC [Escherichia coli 3431]
gi|323153481|gb|EFZ39735.1| queuosine biosynthesis protein queC [Escherichia coli EPECa14]
gi|323178287|gb|EFZ63865.1| queuosine biosynthesis protein queC [Escherichia coli 1180]
gi|323943251|gb|EGB39407.1| exsB protein [Escherichia coli E482]
gi|331037762|gb|EGI09982.1| ExsB protein [Escherichia coli H736]
Length = 231
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNG------FKGDGCGHCAACNLRANGLNHYLA 215
>gi|13541927|ref|NP_111615.1| ATPase [Thermoplasma volcanium GSS1]
gi|74575424|sp|Q979P0|QUEC_THEVO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|14325358|dbj|BAB60262.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 241
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 116/238 (48%), Gaps = 33/238 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DSST L++AL++ V +SFDYGQR+ E++ + K
Sbjct: 1 MPKKAVVLLSGGLDSSTVLAYALNKGFEVYAISFDYGQRHLKEMKSSEAISK-------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAAT 121
D + L I S+LT N+ + +D +P T+VP RN IFL AA
Sbjct: 53 ---FYNVDRKIVKVDLRSIGKSALTDNIEVPSRDISTIEEEIPVTYVPARNTIFLSIAAA 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKK 177
A LG + IG DYSGYPDCR + A+E A++LG + ++ PL +L K
Sbjct: 110 YAESLGTNEVFIGANAIDYSGYPDCRPEYFNAMENALSLGTKIGLKEKFHINVPLQYLSK 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ KL + N+ E + +CY G+ + C C +C LR KG+ME
Sbjct: 170 ADIVKLGVKL------NVPYELTWSCYKGEEE-------ACGECDSCQLRLKGFMEAG 214
>gi|56414389|ref|YP_151464.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197363309|ref|YP_002142946.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|81360136|sp|Q5PFP1|QUEC_SALPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764381|sp|B5BD76|QUEC_SALPK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56128646|gb|AAV78152.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094786|emb|CAR60319.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 231
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 135/233 (57%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL A AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLVAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G ++L+ EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHYLSN 216
>gi|197284034|ref|YP_002149906.1| queuosine biosynthesis protein QueC [Proteus mirabilis HI4320]
gi|227358095|ref|ZP_03842437.1| transcriptional regulator [Proteus mirabilis ATCC 29906]
gi|254764367|sp|B4EU60|QUEC_PROMH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194681521|emb|CAR40410.1| conserved hypothetical protein [Proteus mirabilis HI4320]
gi|227161830|gb|EEI46862.1| transcriptional regulator [Proteus mirabilis ATCC 29906]
Length = 232
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 88/233 (37%), Positives = 143/233 (61%), Gaps = 23/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+++FSGGQDS+TCL AL+++D V ++F+YGQR+K E+E V + +
Sbjct: 2 KKTVVVFSGGQDSTTCLIQALEQYDEVHCITFNYGQRHKEEIEVAQRVSQLLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKI----QDNNLPNTFVPGRNIIFLVFAATLA 123
+L +++L +++ SSLT++ + + + +++P+TFVPGRNI+FL AA A
Sbjct: 56 ---TAHKVLDVSLLNELAISSLTRDNIPVPDFKQSEQSDIPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G +++ GVCETD+SGYPDCR + ++A+ A+NLG+ + TPLMWL K +TW L
Sbjct: 113 YQIGAESVITGVCETDFSGYPDCRDEFVKALNHAVNLGIARDIQFITPLMWLDKAQTWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A G ++ + + TCY G + G GC C AC+LR++G + +
Sbjct: 173 ADYYG---KLDFVRHNTLTCYNGIQ------GDGCGQCAACHLRERGLHGYLQ 216
>gi|170767792|ref|ZP_02902245.1| queuosine biosynthesis protein QueC [Escherichia albertii TW07627]
gi|170123280|gb|EDS92211.1| queuosine biosynthesis protein QueC [Escherichia albertii TW07627]
Length = 231
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 134/232 (57%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L ++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNQLAVSSLTRDSIPVPDYEPDADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRSETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|148379524|ref|YP_001254065.1| hypothetical protein CBO1557 [Clostridium botulinum A str. ATCC
3502]
gi|153933891|ref|YP_001383901.1| exsB protein [Clostridium botulinum A str. ATCC 19397]
gi|153936103|ref|YP_001387449.1| exsB protein [Clostridium botulinum A str. Hall]
gi|189038905|sp|A7FU68|QUEC_CLOB1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189038907|sp|A5I232|QUEC_CLOBH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148289008|emb|CAL83097.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
gi|152929935|gb|ABS35435.1| exsB protein [Clostridium botulinum A str. ATCC 19397]
gi|152932017|gb|ABS37516.1| exsB protein [Clostridium botulinum A str. Hall]
Length = 219
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 141/234 (60%), Gaps = 22/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C + KK
Sbjct: 3 KEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A
Sbjct: 57 ----IEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 113 QKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG+ EF+++Y
Sbjct: 173 YDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYWEFEKEY 217
>gi|283784270|ref|YP_003364135.1| queuosine biosynthesis protein [Citrobacter rodentium ICC168]
gi|282947724|emb|CBG87279.1| queuosine biosynthesis protein [Citrobacter rodentium ICC168]
Length = 231
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLSELAVSSLTRDNIPVPDYEPDADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+ LGM + TPLMWL K ETW LA
Sbjct: 113 QVKAQAVITGVCETDFSGYPDCRDEFVKALNHAVTLGMAKEIRFETPLMWLDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G + V EE+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWGELERVR---EETLTCYNGIK------GDGCGQCAACNLRANGLNHYLA 215
>gi|218549888|ref|YP_002383679.1| queuosine biosynthesis protein QueC [Escherichia fergusonii ATCC
35469]
gi|254764346|sp|B7LMD5|QUEC_ESCF3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218357429|emb|CAQ90068.1| queuosine biosynthesis protein [Escherichia fergusonii ATCC 35469]
gi|323976071|gb|EGB71164.1| exsB protein [Escherichia coli TW10509]
gi|325498265|gb|EGC96124.1| queuosine biosynthesis protein QueC [Escherichia fergusonii ECD227]
Length = 231
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRSNGLHHYLA 215
>gi|329296788|ref|ZP_08254124.1| queuosine biosynthesis protein QueC [Plautia stali symbiont]
Length = 231
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 137/233 (58%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHREEISVAAQLAHQLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ A Q + LP+TFVPGRNI+FL A+ AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPAYNPQASGLPSTFVPGRNILFLTLASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM V TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNNAVSLGMAREVRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ L+ E+ TCY G + G GC C AC+LR +G +++
Sbjct: 173 D---YWQQLPLVRSETLTCYNGVK------GDGCGECAACHLRARGLADYRAN 216
>gi|227113472|ref|ZP_03827128.1| queuosine biosynthesis protein QueC [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 231
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 136/232 (58%), Gaps = 24/232 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + +K+
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIDVARELSQKLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ ++ + D +PNTFVPGRNI+FL AA A
Sbjct: 56 ---TAHKVLDVGLLNELATSSLTRD-SIPVPDYDANAQGIPNTFVPGRNILFLTLAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW L
Sbjct: 112 YQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A D V + TCY G + G GC C AC+LR G +++
Sbjct: 172 ADHYQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQ 214
>gi|150004784|ref|YP_001299528.1| putative aluminum resistance protein [Bacteroides vulgatus ATCC
8482]
gi|189038897|sp|A6L2J2|QUEC_BACV8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|149933208|gb|ABR39906.1| putative aluminum resistance protein [Bacteroides vulgatus ATCC
8482]
Length = 223
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 138/235 (58%), Gaps = 23/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K+ AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E + K
Sbjct: 1 MNKSD-ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARVIAGKAG--- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E + ++ +G++ +SLT + ++ PNTFVPGRN+ FL AA
Sbjct: 57 -------VEFKAMDVSFIGNLGKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAV 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A LGI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW
Sbjct: 110 YARELGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETW 169
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA ++G +++LI E+ TCY G + G GC CPAC LR++G ++ E
Sbjct: 170 ALADELG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215
>gi|218693907|ref|YP_002401574.1| queuosine biosynthesis protein QueC [Escherichia coli 55989]
gi|254764336|sp|B7L681|QUEC_ECO55 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218350639|emb|CAU96331.1| queuosine biosynthesis protein [Escherichia coli 55989]
Length = 231
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAR--- 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 59 ------KVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|291326893|ref|ZP_06126250.2| ExsB protein [Providencia rettgeri DSM 1131]
gi|291312421|gb|EFE52874.1| ExsB protein [Providencia rettgeri DSM 1131]
Length = 237
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 138/236 (58%), Gaps = 23/236 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E+E + +
Sbjct: 10 KRAVVVFSGGQDSTTCLIQALQNYDEVHCVTFDYGQRHRFEIEVAQKLSVSLGAAA---- 65
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + + LP+TFVPGRNI+FL AA A
Sbjct: 66 -----HKVLDVTLLNELAISSLTRDNIPVPDFAESESSALPSTFVPGRNILFLTLAAIYA 120
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ A++LG+ ++ TPLMWL K +TW L
Sbjct: 121 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVDLGLAKNIRFETPLMWLNKAQTWAL 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A G + I +++ TCY G + G GC C AC+LR KG E+ +
Sbjct: 181 ADSYGH---LETIRQQTLTCYNGIQ------GDGCGECAACHLRSKGLNEYLSDKE 227
>gi|294635330|ref|ZP_06713827.1| ExsB protein [Edwardsiella tarda ATCC 23685]
gi|291091306|gb|EFE23867.1| ExsB protein [Edwardsiella tarda ATCC 23685]
Length = 229
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL R+D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQRYDDVHCITFDYGQRHRAEIDVARNLAHQLGASA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ + + Q + +PNTFVPGRNI+FL AA AY++
Sbjct: 58 -----HKVLDVGLLNELAISSLTRDNIPVPTQSETGIPNTFVPGRNILFLTLAAIYAYQV 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 113 EAEAVITGVCETDFSGYPDCRDAFVKALHHAVSLGMARDIRFETPLMWLNKAETWALADY 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G + V ++ TCY G + G GC C AC+LR G +++
Sbjct: 173 YGQLERVR---HDTLTCYNGIQ------GDGCGHCAACHLRAHGLQQYQA 213
>gi|300918173|ref|ZP_07134780.1| ExsB protein [Escherichia coli MS 115-1]
gi|300414624|gb|EFJ97934.1| ExsB protein [Escherichia coli MS 115-1]
Length = 231
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGMK------GDGCGHCAACNLRTNGLNHYLA 215
>gi|50120094|ref|YP_049261.1| queuosine biosynthesis protein QueC [Pectobacterium atrosepticum
SCRI1043]
gi|81645861|sp|Q6D820|QUEC_ERWCT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|49610620|emb|CAG74065.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 231
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 137/233 (58%), Gaps = 24/233 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E+E + +K+
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ ++ + D +PNTFVPGRNI+FL A+ A
Sbjct: 58 -----HKVLDVGLLNELATSSLTRD-SIPVPDYDANAQGIPNTFVPGRNILFLTLASIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW L
Sbjct: 112 YQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A D V + TCY G + G GC C AC+LR G ++++
Sbjct: 172 ADYYQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQK 215
>gi|225025884|ref|ZP_03715076.1| hypothetical protein EUBHAL_00112 [Eubacterium hallii DSM 3353]
gi|224956781|gb|EEG37990.1| hypothetical protein EUBHAL_00112 [Eubacterium hallii DSM 3353]
Length = 221
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 23/240 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + +K +A+++FSGGQDS+TCL WAL R+ +V LSFDY Q++ ELEC + +
Sbjct: 1 MQE-LKNKDAAVVVFSGGQDSTTCLFWALKRYKKVIALSFDYHQKHVKELECAKKICR-- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLV 117
D E HI+ +++L ++ +SLT+ V + PN+FV GRN++FL
Sbjct: 58 --------DHEVEHHIMDMSLLNQLAPNSLTRVDIKVDESAPEEGTPNSFVDGRNLLFLS 109
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
+AA A + GIT+I+ GV ++D+SGYPDCR I+++ T + L M+ + TPLMWL K
Sbjct: 110 YAAVFAKQRGITDIITGVSQSDFSGYPDCRDMFIKSLNTTLCLAMDYQFDIITPLMWLDK 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
ETW LA ++G ++I E+ TCY G G GC CP+C LR+KG +
Sbjct: 170 KETWALADELGAF---DIIRNETLTCYNGI------IGDGCGHCPSCKLRKKGLDAYLAS 220
>gi|153939170|ref|YP_001390902.1| ExsB protein [Clostridium botulinum F str. Langeland]
gi|189038908|sp|A7GDP2|QUEC_CLOBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|152935066|gb|ABS40564.1| ExsB protein [Clostridium botulinum F str. Langeland]
gi|295318964|gb|ADF99341.1| ExsB protein [Clostridium botulinum F str. 230613]
Length = 219
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 141/234 (60%), Gaps = 23/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C + KK
Sbjct: 3 KEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A
Sbjct: 57 ----IEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 113 QKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF EKY
Sbjct: 173 YDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEF-EKY 216
>gi|15800174|ref|NP_286186.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7
EDL933]
gi|15829752|ref|NP_308525.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
Sakai]
gi|168747880|ref|ZP_02772902.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4113]
gi|168754549|ref|ZP_02779556.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4401]
gi|168760401|ref|ZP_02785408.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4501]
gi|168768399|ref|ZP_02793406.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4486]
gi|168777140|ref|ZP_02802147.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4196]
gi|168778937|ref|ZP_02803944.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4076]
gi|168786295|ref|ZP_02811302.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC869]
gi|168798008|ref|ZP_02823015.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC508]
gi|195936008|ref|ZP_03081390.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4024]
gi|208805824|ref|ZP_03248161.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4206]
gi|208816134|ref|ZP_03257313.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4045]
gi|208823253|ref|ZP_03263571.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4042]
gi|209396500|ref|YP_002269091.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4115]
gi|217325252|ref|ZP_03441336.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
TW14588]
gi|254791628|ref|YP_003076465.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
TW14359]
gi|261223927|ref|ZP_05938208.1| enzyme in preQ0 biosynthesis [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256359|ref|ZP_05948892.1| enzyme in preQ0 biosynthesis [Escherichia coli O157:H7 str.
FRIK966]
gi|291281351|ref|YP_003498169.1| Queuosine biosynthesis protein queC [Escherichia coli O55:H7 str.
CB9615]
gi|81766178|sp|Q8XE52|QUEC_ECO57 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764337|sp|B5Z3V1|QUEC_ECO5E RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|12513306|gb|AAG54794.1|AE005223_9 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13359955|dbj|BAB33921.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187767546|gb|EDU31390.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4196]
gi|188017662|gb|EDU55784.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4113]
gi|189003020|gb|EDU72006.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4076]
gi|189357982|gb|EDU76401.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4401]
gi|189362373|gb|EDU80792.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4486]
gi|189369159|gb|EDU87575.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4501]
gi|189373665|gb|EDU92081.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC869]
gi|189379336|gb|EDU97752.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC508]
gi|208725625|gb|EDZ75226.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4206]
gi|208732782|gb|EDZ81470.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4045]
gi|208737446|gb|EDZ85130.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4042]
gi|209157900|gb|ACI35333.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
EC4115]
gi|209778638|gb|ACI87631.1| hypothetical protein ECs0498 [Escherichia coli]
gi|209778640|gb|ACI87632.1| hypothetical protein ECs0498 [Escherichia coli]
gi|209778642|gb|ACI87633.1| hypothetical protein ECs0498 [Escherichia coli]
gi|209778644|gb|ACI87634.1| hypothetical protein ECs0498 [Escherichia coli]
gi|209778646|gb|ACI87635.1| hypothetical protein ECs0498 [Escherichia coli]
gi|217321473|gb|EEC29897.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
TW14588]
gi|254591028|gb|ACT70389.1| enzyme in preQ0 biosynthesis [Escherichia coli O157:H7 str.
TW14359]
gi|290761224|gb|ADD55185.1| Queuosine biosynthesis protein queC [Escherichia coli O55:H7 str.
CB9615]
gi|320192860|gb|EFW67500.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli O157:H7 str.
EC1212]
gi|320638439|gb|EFX08153.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
G5101]
gi|320643820|gb|EFX12943.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H- str.
493-89]
gi|320649171|gb|EFX17749.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H- str.
H 2687]
gi|320656064|gb|EFX23980.1| queuosine biosynthesis protein QueC [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661214|gb|EFX28645.1| queuosine biosynthesis protein QueC [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665190|gb|EFX32283.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
LSU-61]
gi|326341208|gb|EGD65000.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli O157:H7 str.
1044]
gi|326346017|gb|EGD69756.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli O157:H7 str.
1125]
Length = 231
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 135/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++ + A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKVLNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|110804472|ref|YP_687992.1| queuosine biosynthesis protein QueC [Shigella flexneri 5 str. 8401]
gi|123048404|sp|Q0T7D9|QUEC_SHIF8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110614020|gb|ABF02687.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 231
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQ+++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQQHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|118442853|ref|YP_878459.1| exsB protein [Clostridium novyi NT]
gi|189038910|sp|A0Q1F7|QUEC_CLONN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118133309|gb|ABK60353.1| exsB protein [Clostridium novyi NT]
Length = 221
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 145/234 (61%), Gaps = 22/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL W RF V +SFDY Q++K+ELEC + K
Sbjct: 5 NEKAIVVFSGGQDSTTCLFWTKKRFKEVIAVSFDYNQKHKLELECAKEICSKYN------ 58
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E HIL L +L ++ +SLT+ V ++ +PN+FV GRN++FL F A A
Sbjct: 59 ----IEHHILDLGLLNQLAPNSLTRTDIKVDKNAPEDGVPNSFVDGRNMLFLTFVAVFAK 114
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI++I+ GV ++D+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETWK+A
Sbjct: 115 QRGISHIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFVLHTPLMWIDKAETWKMA 174
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D G ++++I E+ TCY G + G GC CP+C LR+KG+++FKE Y
Sbjct: 175 YDFG---VLDIIKNETLTCYNGIK------GNGCGECPSCKLRKKGYLKFKELY 219
>gi|292487476|ref|YP_003530348.1| queuosine biosynthesis protein QueC [Erwinia amylovora CFBP1430]
gi|292898718|ref|YP_003538087.1| hypothetical protein EAM_0999 [Erwinia amylovora ATCC 49946]
gi|291198566|emb|CBJ45674.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
gi|291552895|emb|CBA19940.1| Queuosine biosynthesis protein queC ) [Erwinia amylovora CFBP1430]
Length = 231
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 137/233 (58%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDVARQLSTLL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ +L + +L +++ SSLT++ A + LP+TFVPGRN++F FA+ AY
Sbjct: 54 -GVRAHKVLDVTMLNELAVSSLTRDNIPVPAYNPAASGLPSTFVPGRNLVFFTFASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ IV G CETD+SGYPDCR++ + A+ AINLGM + + TPLMWL K ETW LA
Sbjct: 113 QIEAQAIVTGACETDFSGYPDCRNEFVNALNQAINLGMARELRIETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LI ++ TCY G G GC C AC+LR +G E+++
Sbjct: 173 D---YWHQLPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216
>gi|320176589|gb|EFW51633.1| Queuosine Biosynthesis QueC ATPase [Shigella dysenteriae CDC
74-1112]
Length = 231
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KCAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLA 215
>gi|265751135|ref|ZP_06087198.1| exsB protein [Bacteroides sp. 3_1_33FAA]
gi|263238031|gb|EEZ23481.1| exsB protein [Bacteroides sp. 3_1_33FAA]
Length = 223
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 138/235 (58%), Gaps = 23/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K+ AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E + K
Sbjct: 1 MNKSD-ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARAIAGKAG--- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E + ++ +G++ +SLT + ++ PNTFVPGRN+ FL AA
Sbjct: 57 -------VEFKAMDVSFIGNLDKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAV 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A LGI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K ETW
Sbjct: 110 YARELGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETW 169
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA ++G +++LI E+ TCY G + G GC CPAC LR++G ++ E
Sbjct: 170 ALADELG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215
>gi|271499603|ref|YP_003332628.1| exsB protein [Dickeya dadantii Ech586]
gi|270343158|gb|ACZ75923.1| exsB protein [Dickeya dadantii Ech586]
Length = 231
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 138/233 (59%), Gaps = 24/233 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + +
Sbjct: 3 SAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDVAAELAHTLGARA----- 57
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + + LP+TFVPGRNI+FL A+ AY
Sbjct: 58 ----HKVLNVNLLNELAVSSLTRD-NIPVPEFDATVDGLPSTFVPGRNILFLTLASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G ++ GVCETD+SGYPDCR + ++A+ A+ LG+ + TPLMWL K ETW LA
Sbjct: 113 QVGAETVITGVCETDFSGYPDCRDEFVKALNQAVALGLAKDIRFITPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
D V + TCY G + G GC C AC+LR KG E+++
Sbjct: 173 DYYQQLDTVQ---NHTLTCYNGIK------GTGCGQCAACHLRAKGLAEYRQN 216
>gi|238788015|ref|ZP_04631811.1| Queuosine biosynthesis protein queC [Yersinia frederiksenii ATCC
33641]
gi|238723963|gb|EEQ15607.1| Queuosine biosynthesis protein queC [Yersinia frederiksenii ATCC
33641]
Length = 232
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 88/237 (37%), Positives = 139/237 (58%), Gaps = 23/237 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDIARKLAAKL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L +++L +++ SSLT++ + + + +P+TFVPGRNI+FL A+ A
Sbjct: 54 -GVKAHKVLDVSMLNELAVSSLTRDSIPVPTYDEDEKDAVPSTFVPGRNILFLTLASIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAQTVITGVCETDFSGYPDCRDEFVKALNNAIDLGIGRDIAFSTPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A + L+ ++ TCY G + G GC C AC+LR KG + +
Sbjct: 173 ADYYQQ---LELVRHDTLTCYNGIQ------GDGCGQCAACHLRAKGLESYLINKSN 220
>gi|197120054|ref|YP_002140481.1| 7-cyano-7-deazaguanine synthase [Geobacter bemidjiensis Bem]
gi|254764348|sp|B5EDQ7|QUEC_GEOBB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|197089414|gb|ACH40685.1| 7-cyano-7-deazaguanine synthase [Geobacter bemidjiensis Bem]
Length = 225
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 117/236 (49%), Gaps = 28/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L+SGG DS+TCL+ A ++ LSF YGQR++ ELE + + +
Sbjct: 1 MQKKAVILYSGGLDSTTCLAIAKEQGFAPYALSFSYGQRHQQELEVAKLNARPMGAV--- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
DH+L L + S+LT ++ + + +P T+VP RN IFL FA A
Sbjct: 58 -------DHLLVEFDLRKMGGSALTSDIEVPKEGVGEEIPVTYVPARNTIFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
L +I IGV DYSGYPDCR + I A ET NL ++ V +HTPL+ L K E
Sbjct: 111 TLDCFDIFIGVNALDYSGYPDCRPEFISAYETMANLATKAGVEGKRLKIHTPLISLTKAE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + ++H+CY D G C C +C LR KG+ E
Sbjct: 171 IIQKGLSLG------VDYSKTHSCYDPAED-----GAACGRCDSCRLRLKGFAEAG 215
>gi|22124941|ref|NP_668364.1| queuosine biosynthesis protein QueC [Yersinia pestis KIM 10]
gi|45440630|ref|NP_992169.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Microtus str. 91001]
gi|51595316|ref|YP_069507.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis IP
32953]
gi|108808636|ref|YP_652552.1| queuosine biosynthesis protein QueC [Yersinia pestis Antiqua]
gi|108811105|ref|YP_646872.1| queuosine biosynthesis protein QueC [Yersinia pestis Nepal516]
gi|145600044|ref|YP_001164120.1| queuosine biosynthesis protein QueC [Yersinia pestis Pestoides F]
gi|149365004|ref|ZP_01887039.1| queuosine biosynthesis protein queC [Yersinia pestis CA88-4125]
gi|153948926|ref|YP_001402045.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis IP
31758]
gi|162419001|ref|YP_001607412.1| queuosine biosynthesis protein QueC [Yersinia pestis Angola]
gi|165926543|ref|ZP_02222375.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936090|ref|ZP_02224660.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011014|ref|ZP_02231912.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213075|ref|ZP_02239110.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167398760|ref|ZP_02304284.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167421566|ref|ZP_02313319.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167423798|ref|ZP_02315551.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468479|ref|ZP_02333183.1| queuosine biosynthesis protein QueC [Yersinia pestis FV-1]
gi|170025444|ref|YP_001721949.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis
YPIII]
gi|186894333|ref|YP_001871445.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis
PB1/+]
gi|218930180|ref|YP_002348055.1| queuosine biosynthesis protein QueC [Yersinia pestis CO92]
gi|229838753|ref|ZP_04458912.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229896093|ref|ZP_04511263.1| enzyme in preQ0 biosynthesis [Yersinia pestis Pestoides A]
gi|229899321|ref|ZP_04514464.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
str. India 195]
gi|229901335|ref|ZP_04516457.1| enzyme in preQ0 biosynthesis [Yersinia pestis Nepal516]
gi|270489520|ref|ZP_06206594.1| protein ExsB [Yersinia pestis KIM D27]
gi|294504882|ref|YP_003568944.1| hypothetical protein YPZ3_2772 [Yersinia pestis Z176003]
gi|81593863|sp|Q8ZC72|QUEC_YERPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81640198|sp|Q66DS7|QUEC_YERPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118574294|sp|Q1C4L5|QUEC_YERPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118574295|sp|Q1CL58|QUEC_YERPN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016457|sp|A7FLB7|QUEC_YERP3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016458|sp|A4TPD5|QUEC_YERPP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764395|sp|B2K6W4|QUEC_YERPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764396|sp|A9QZP5|QUEC_YERPG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764397|sp|B1JHR4|QUEC_YERPY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21957781|gb|AAM84615.1|AE013707_3 hypothetical protein y1034 [Yersinia pestis KIM 10]
gi|45435487|gb|AAS61046.1| Predicted ATPase (PP-loop superfamily), confers aluminum resistance
[Yersinia pestis biovar Microtus str. 91001]
gi|51588598|emb|CAH20206.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108774753|gb|ABG17272.1| hypothetical protein YPN_0940 [Yersinia pestis Nepal516]
gi|108780549|gb|ABG14607.1| hypothetical protein YPA_2645 [Yersinia pestis Antiqua]
gi|115348791|emb|CAL21745.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145211740|gb|ABP41147.1| hypothetical protein YPDSF_2785 [Yersinia pestis Pestoides F]
gi|149291417|gb|EDM41491.1| queuosine biosynthesis protein queC [Yersinia pestis CA88-4125]
gi|152960421|gb|ABS47882.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis IP
31758]
gi|162351816|gb|ABX85764.1| queuosine biosynthesis protein QueC [Yersinia pestis Angola]
gi|165916235|gb|EDR34842.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921471|gb|EDR38668.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990014|gb|EDR42315.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205862|gb|EDR50342.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166960485|gb|EDR56506.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051264|gb|EDR62672.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167057968|gb|EDR67714.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751978|gb|ACA69496.1| exsB protein [Yersinia pseudotuberculosis YPIII]
gi|186697359|gb|ACC87988.1| exsB protein [Yersinia pseudotuberculosis PB1/+]
gi|229681264|gb|EEO77358.1| enzyme in preQ0 biosynthesis [Yersinia pestis Nepal516]
gi|229687723|gb|EEO79796.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695119|gb|EEO85166.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229701016|gb|EEO89045.1| enzyme in preQ0 biosynthesis [Yersinia pestis Pestoides A]
gi|262362947|gb|ACY59668.1| hypothetical protein YPD4_2761 [Yersinia pestis D106004]
gi|262366867|gb|ACY63424.1| hypothetical protein YPD8_2751 [Yersinia pestis D182038]
gi|270338024|gb|EFA48801.1| protein ExsB [Yersinia pestis KIM D27]
gi|294355341|gb|ADE65682.1| hypothetical protein YPZ3_2772 [Yersinia pestis Z176003]
gi|320016335|gb|ADV99906.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 232
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 138/237 (58%), Gaps = 25/237 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRTEIDVARELALQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLVFAATL 122
+L + +L +++ SSLT++ ++ + D LP+TFVPGRNI+FL A+
Sbjct: 56 ---TAHKVLDVGMLNELAVSSLTRD-SIPVPSYDANADGALPSTFVPGRNILFLTLASIY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AY++ ++ GVCETD+SGYPDCR + I+A+ AI+LG+ + TPLMWL K ETW
Sbjct: 112 AYQVQAQAVITGVCETDFSGYPDCRDEFIKALNHAIDLGIGRDIAFITPLMWLDKAETWA 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA ++LI + TCY G + G GC C AC+LR KG + Q
Sbjct: 172 LADYYQQ---LDLIRHHTLTCYNGIK------GDGCGQCAACHLRAKGLASYMANKQ 219
>gi|157369345|ref|YP_001477334.1| queuosine biosynthesis protein QueC [Serratia proteamaculans 568]
gi|167016451|sp|A8GAR6|QUEC_SERP5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157321109|gb|ABV40206.1| exsB protein [Serratia proteamaculans 568]
Length = 232
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 138/237 (58%), Gaps = 23/237 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E+E + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALKQYDEVHCVTFDYGQRHRAEIEVAQELSVALGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMK----IQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + Q N LP+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKLLDVGLLNELAISSLTRDNIPVPAYDSTQSNGLPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW L
Sbjct: 113 YQVEAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A +LV +++ TCY G + G GC C AC+LR G +++ +
Sbjct: 173 ADYYHQLELVQ---QDTLTCYNGIK------GNGCGECAACHLRANGLQQYQINKAE 220
>gi|187779779|ref|ZP_02996252.1| hypothetical protein CLOSPO_03375 [Clostridium sporogenes ATCC
15579]
gi|187773404|gb|EDU37206.1| hypothetical protein CLOSPO_03375 [Clostridium sporogenes ATCC
15579]
Length = 219
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 22/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+ELE + KK
Sbjct: 3 KEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELEFAKDICKK-------- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E IL L +L ++ +SLT+ V +PN+FV GRN++FL F A A
Sbjct: 55 --HNIEHKILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 113 QRGINAIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEILTPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF+++Y
Sbjct: 173 YDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKEY 217
>gi|307129934|ref|YP_003881950.1| enzyme in preQ0 biosynthesis [Dickeya dadantii 3937]
gi|306527463|gb|ADM97393.1| enzyme in preQ0 biosynthesis [Dickeya dadantii 3937]
Length = 231
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 92/230 (40%), Positives = 135/230 (58%), Gaps = 22/230 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + + +
Sbjct: 3 SAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDVAAELAQTLGARA----- 57
Query: 70 SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + LP+TFVPGRNI+FL A+ AY+
Sbjct: 58 ----HKVLNVGLLNELAVSSLTRDNIPVPEFDANADGLPSTFVPGRNILFLTLASIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW LA
Sbjct: 114 VGADTVITGVCETDFSGYPDCRDEFVKALNQAITLGLARDIRFVTPLMWLNKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D V + TCY G + G GC C AC+LR KG E++
Sbjct: 174 YYQQLDTVK---NHTLTCYNGIK------GTGCGQCAACHLRAKGLAEYQ 214
>gi|170754738|ref|YP_001781193.1| ExsB protein [Clostridium botulinum B1 str. Okra]
gi|254764324|sp|B1IL95|QUEC_CLOBK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169119950|gb|ACA43786.1| ExsB protein [Clostridium botulinum B1 str. Okra]
Length = 219
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 141/234 (60%), Gaps = 23/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C + KK
Sbjct: 3 KEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A
Sbjct: 57 ----IEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 113 QKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF EKY
Sbjct: 173 YDLGVLDIVK---EETLTCYNGIK------ADGCGECPACNLRKKGYLEF-EKY 216
>gi|312171581|emb|CBX79839.1| Queuosine biosynthesis protein queC ) [Erwinia amylovora ATCC
BAA-2158]
Length = 231
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 137/233 (58%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDVARQLSTSL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ +L + +L +++ SSLT++ A + LP+TFVPGRNI+F FA+ AY
Sbjct: 54 -GVRAHKVLDVTMLNELAVSSLTRDNIPVPAYNPAASGLPSTFVPGRNIVFFTFASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ IV G CETD+SGYPDCR++ + A+ AINLGM + + TPLMWL K ETW LA
Sbjct: 113 QIEAQAIVTGACETDFSGYPDCRNEFVNALNQAINLGMARELRIETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LI ++ TCY G G GC C AC+LR +G E+++
Sbjct: 173 D---YWHQLPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216
>gi|167747131|ref|ZP_02419258.1| hypothetical protein ANACAC_01844 [Anaerostipes caccae DSM 14662]
gi|167654091|gb|EDR98220.1| hypothetical protein ANACAC_01844 [Anaerostipes caccae DSM 14662]
Length = 219
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 143/238 (60%), Gaps = 22/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA +++ V LSFDYGQ++ EL C + KK
Sbjct: 1 MSKPTKAVVVFSGGQDSTTCLFWAKKKYEEVIALSFDYGQKHSDELICAKEICKKYG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E HIL +A+L ++ +SLT+ V + + PN+FV GRN++FL FAA
Sbjct: 58 -------VEHHILDMALLNQLAPNSLTRADIEVDKEAPETGTPNSFVDGRNMLFLTFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K ETW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFITSLETTLTLAMDYEFEVITPLMWIDKKETW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
K+A D+G + ++I +E+ TCY G R G GC CPAC LR++G + + +
Sbjct: 171 KMADDLG---VFDVIRQETLTCYNGVR------GDGCGDCPACRLRRRGMEAYLSERK 219
>gi|253702376|ref|YP_003023565.1| exsB protein [Geobacter sp. M21]
gi|259551532|sp|C6E7E7|QUEC_GEOSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|251777226|gb|ACT19807.1| exsB protein [Geobacter sp. M21]
Length = 225
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 116/236 (49%), Gaps = 28/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L+SGG DS+TCL+ A + LSF YGQR++ ELE + + +
Sbjct: 1 MQKKAVILYSGGLDSTTCLAIAKKQGFAPYALSFSYGQRHQQELEVAKLNARPMGAV--- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
DH+L L + S+LT ++ + + +P T+VP RN IFL FA A
Sbjct: 58 -------DHLLVEFDLRKMGGSALTSDIEVPKEGVGEEIPVTYVPARNTIFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
L +I IGV DYSGYPDCR + I A ET NL ++ V +HTPL+ L K E
Sbjct: 111 TLDCFDIFIGVNALDYSGYPDCRPEFISAYETMANLATKAGVEGKRLQIHTPLISLTKAE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + ++H+CY D G C C +C LR KG+ E
Sbjct: 171 IIQKGISLG------VDYSKTHSCYDPAED-----GAACGRCDSCRLRLKGFAEAG 215
>gi|146310572|ref|YP_001175646.1| queuosine biosynthesis protein QueC [Enterobacter sp. 638]
gi|145317448|gb|ABP59595.1| preQ(0) biosynthesis protein QueC [Enterobacter sp. 638]
Length = 242
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 133/233 (57%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 13 KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 68
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL A AY
Sbjct: 69 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPDADGIPNTFVPGRNILFLTLTAIYAY 123
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 124 QVKAEAIITGVCETDFSGYPDCRDEFVKALNHAVDLGMAKEIRFETPLMWLDKAETWALA 183
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + L+ E+ TCY G + G GC C AC LR G +
Sbjct: 184 D---YWEKLELVRTETLTCYNGIK------GDGCGQCAACNLRSNGLNHYLAN 227
>gi|188534625|ref|YP_001908422.1| queuosine biosynthesis protein QueC [Erwinia tasmaniensis Et1/99]
gi|254764345|sp|B2VIU4|QUEC_ERWT9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|188029667|emb|CAO97546.1| Queuosine biosynthesis protein [Erwinia tasmaniensis Et1/99]
Length = 231
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 89/233 (38%), Positives = 138/233 (59%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL+++D V ++FDYGQR++ E++ + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALEQYDEVHCVTFDYGQRHRAEIDVAQQLSASL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ +L + +L +++ SSLT++ A + LP+TFVPGRNI+F FA+ A+
Sbjct: 54 -GVRAHKVLDVTMLNELAASSLTRDNIPVPAYDPSASGLPSTFVPGRNIVFFTFASIYAF 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ I+ G CETD+SGYPDCR + ++A+ A+NLGM + + TPLMWL K ETW LA
Sbjct: 113 QIEAEAIITGACETDFSGYPDCRDEFVKALNRAVNLGMARELRIETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LI ++ TCY G G GC C AC+LR +G ++++
Sbjct: 173 D---YWQQLPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLDQYQQN 216
>gi|206577844|ref|YP_002240076.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae 342]
gi|288936827|ref|YP_003440886.1| exsB protein [Klebsiella variicola At-22]
gi|290510117|ref|ZP_06549487.1| exsB protein [Klebsiella sp. 1_1_55]
gi|254764354|sp|B5Y0T5|QUEC_KLEP3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|206566902|gb|ACI08678.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae 342]
gi|288891536|gb|ADC59854.1| exsB protein [Klebsiella variicola At-22]
gi|289776833|gb|EFD84831.1| exsB protein [Klebsiella sp. 1_1_55]
Length = 233
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+ +
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + +PNTFVPGRNI+FL A AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G ++L+ +E+ TCY G + G GC C AC LR G ++
Sbjct: 173 DFWGQ---LDLVRQETLTCYNGIK------GDGCGQCAACNLRANGLNQY 213
>gi|326203400|ref|ZP_08193264.1| exsB protein [Clostridium papyrosolvens DSM 2782]
gi|325986220|gb|EGD47052.1| exsB protein [Clostridium papyrosolvens DSM 2782]
Length = 226
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 81/239 (33%), Positives = 118/239 (49%), Gaps = 33/239 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L A + + +SF+YGQR+ ELEC + +K
Sbjct: 3 KKAVVLLSGGMDSTTALYIAKSQGYEIYAISFNYGQRHFKELECAKIISEKAG------- 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++HI+ + S+LT + I + +P T+VP RN+IFL FAA+ A
Sbjct: 56 ---VKEHIIVNTNMDAWGGSALTDSSISVPDSNIHNGKIPITYVPARNMIFLSFAASYAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKY 178
+G +I IGV E DYSGY DCR + I A+E AIN G + +H PL+ + K
Sbjct: 113 VIGAQDIFIGVSEVDYSGYVDCRQEFIDAMENAINFGTVCAVEEGKKIKIHAPLVCMTKS 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ KL +G + + TCY G+ C +C +C LR K + E EK
Sbjct: 173 DEIKLGIKLG------VDYSLTWTCYRGEE-------LACGTCDSCSLRLKAFKEAGEK 218
>gi|300715598|ref|YP_003740401.1| Queuosine biosynthesis protein QueC [Erwinia billingiae Eb661]
gi|299061434|emb|CAX58546.1| Queuosine biosynthesis protein QueC [Erwinia billingiae Eb661]
Length = 231
Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 135/233 (57%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + +
Sbjct: 2 RRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDIARELSLSLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT+ A + LP+TFVPGRNI+FL A+ AY
Sbjct: 58 -----HKVLDVTMLNELAVSSLTRESIPVPAYDPDASGLPSTFVPGRNILFLTLASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ AI LGM V TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNHAIELGMARSVRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ L+ E+ TCY G++ G GC C AC+LR KG E++
Sbjct: 173 D---YWQQLPLVRNETLTCYNGEK------GDGCGECAACHLRAKGLNEYQAN 216
>gi|238795535|ref|ZP_04639050.1| Queuosine biosynthesis protein queC [Yersinia mollaretii ATCC
43969]
gi|238720654|gb|EEQ12455.1| Queuosine biosynthesis protein queC [Yersinia mollaretii ATCC
43969]
Length = 232
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 88/237 (37%), Positives = 136/237 (57%), Gaps = 23/237 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARELATQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + +P+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKVLDVGMLNELAVSSLTRDNIPVPTYNEDDTDTVPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A ++L+ + TCY G + G GC C AC+LR KG + +
Sbjct: 173 ADYYQQ---LDLVRNHTLTCYNGIQ------GDGCGECAACHLRAKGLELYLANKPN 220
>gi|226948888|ref|YP_002803979.1| ExsB protein [Clostridium botulinum A2 str. Kyoto]
gi|254764323|sp|C1FN27|QUEC_CLOBJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|226843177|gb|ACO85843.1| ExsB protein [Clostridium botulinum A2 str. Kyoto]
Length = 219
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 140/234 (59%), Gaps = 23/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C + KK
Sbjct: 3 KEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A
Sbjct: 57 ----IEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 113 QKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG+ EF EKY
Sbjct: 173 YDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYWEF-EKY 216
>gi|323965131|gb|EGB60590.1| exsB protein [Escherichia coli M863]
gi|327254772|gb|EGE66388.1| queuosine biosynthesis protein queC [Escherichia coli STEC_7v]
Length = 231
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDSSTCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSSTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRSNGLHHYLA 215
>gi|152968979|ref|YP_001334088.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262042480|ref|ZP_06015639.1| transcription regulator ExsB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|167016431|sp|A6T5I7|QUEC_KLEP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|150953828|gb|ABR75858.1| putative (aluminum) resistance protein [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|259040184|gb|EEW41296.1| transcription regulator ExsB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 233
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+ +
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + +PNTFVPGRNI+FL A AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G ++
Sbjct: 173 DYWGQ---LDLVRRETLTCYNGIK------GDGCGQCAACNLRANGLNQYLA 215
>gi|238919018|ref|YP_002932532.1| queuosine biosynthesis protein QueC [Edwardsiella ictaluri 93-146]
gi|259551526|sp|C5BCK3|QUEC_EDWI9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|238868586|gb|ACR68297.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 229
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 134/231 (58%), Gaps = 20/231 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALHHYDDVHCITFDYGQRHRAEIDVARRLAGQLGASA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L + +L +++ SSLT++ + + Q ++ +PNTFVPGRN++FL AA AY++
Sbjct: 58 -----HKVLDVGLLNELAISSLTRDNIPVPTQSEDGIPNTFVPGRNVLFLTLAAIYAYQV 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ GVCETD+SGYPDCR ++A+ A+ LGM + TPLMWL K ETW LA
Sbjct: 113 EAEAVITGVCETDFSGYPDCRDQFVQALNHAVCLGMARDIRFETPLMWLNKAETWALADY 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G V ++ TCY G + G GC C AC+LR G ++
Sbjct: 173 YGQLARVR---HDTLTCYNGVQ------GDGCGHCAACHLRAHGLQQYLAN 214
>gi|16081996|ref|NP_394411.1| transcription regulator (exsB) related protein [Thermoplasma
acidophilum DSM 1728]
gi|74543780|sp|Q9HJL6|QUEC_THEAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|10640266|emb|CAC12080.1| transcription regulator (exsB) related protein [Thermoplasma
acidophilum]
Length = 238
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 117/240 (48%), Gaps = 33/240 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L SGG DSST L++A+ V +SFDYGQR+ E+ + K
Sbjct: 2 ERKKAVVLLSGGLDSSTVLAYAISLGYEVHAISFDYGQRHSREMNSSEELAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAAT 121
G D + L I S+LT ++ + +D +P T+VP RN IFL AA
Sbjct: 54 ---YYGVDRKIVHVDLRSIGKSALTDDIEVPSRDLESIPEEIPVTYVPARNTIFLSIAAA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME----SHVTVHTPLMWLKK 177
A +G T+I IG DYSGYPDCR + A+E A+ LG E + ++ PL +L K
Sbjct: 111 YAESIGSTDIFIGANAIDYSGYPDCRPEYFNAMEKALTLGTEIGLRKGMHINVPLQYLTK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++ +G + E++ +CY G C C +C LR KG+ME +
Sbjct: 171 ADIIRMGLKLG------VPYEKTWSCYKGGEK-------ACGECDSCLLRLKGFMEAGSE 217
>gi|294141102|ref|YP_003557080.1| exsB protein [Shewanella violacea DSS12]
gi|293327571|dbj|BAJ02302.1| exsB protein [Shewanella violacea DSS12]
Length = 228
Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 144/231 (62%), Gaps = 21/231 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGGQDS+TCL AL+++D V ++FDYGQR+ E+E + K++
Sbjct: 3 KAVVVFSGGQDSTTCLIQALEQYDEVHGITFDYGQRHSQEIEVAKDLGKRL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L +L + +L +++ S+LT++ V+ + DN LPNTFVPGRNI+FL A AY+L
Sbjct: 54 GLASHKVLDVTMLNELAISALTRDDIPVSNTLMDNGLPNTFVPGRNILFLTLAGIFAYQL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GVCETDYSGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 114 GAEAVITGVCETDYSGYPDCRNDFVKAMASALVQGMDIELELVTPLMWLNKAETWALADK 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + L+ +E+ TCY G GC +CPAC LRQ G ++
Sbjct: 174 Y---NCLALVRDETLTCYNNI------LGSGCGTCPACLLRQTGLDDYLSN 215
>gi|125975583|ref|YP_001039493.1| exsB protein [Clostridium thermocellum ATCC 27405]
gi|256005912|ref|ZP_05430857.1| exsB protein [Clostridium thermocellum DSM 2360]
gi|281416595|ref|ZP_06247615.1| exsB protein [Clostridium thermocellum JW20]
gi|189038911|sp|A3DK21|QUEC_CLOTH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|125715808|gb|ABN54300.1| preQ(0) biosynthesis protein QueC [Clostridium thermocellum ATCC
27405]
gi|255990116|gb|EEU00253.1| exsB protein [Clostridium thermocellum DSM 2360]
gi|281407997|gb|EFB38255.1| exsB protein [Clostridium thermocellum JW20]
gi|316939702|gb|ADU73736.1| exsB protein [Clostridium thermocellum DSM 1313]
Length = 222
Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCLS AL V LSFDYGQRN+ ELE V K
Sbjct: 2 RRAVVLLSGGLDSTTCLSVALAEGYEVYPLSFDYGQRNRKELESAKQVVKYF-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L E I+ + +G + + + +V +P T+VP RNIIFL +A A +
Sbjct: 54 -KLKEHKIVKIGNVGGSALTDMNIDVPDYKGLPTIPVTYVPARNIIFLSYAVGYAEVVDA 112
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
I IGV DYSGYPDCR + I A + AINLG + V + TPL+ L K E KL
Sbjct: 113 EAIFIGVNAVDYSGYPDCRPEFIEAFQKAINLGTKSGVNGKPVKIITPLINLSKAEIIKL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A + N L + TCY G C C +C LR KG+ E
Sbjct: 173 ACE------NNAPLHLTTTCYRGGEK-------ACGVCDSCVLRLKGFKEAG 211
>gi|330011622|ref|ZP_08307127.1| protein ExsB [Klebsiella sp. MS 92-3]
gi|328534106|gb|EGF60743.1| protein ExsB [Klebsiella sp. MS 92-3]
Length = 233
Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+ +
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + +PNTFVPGRNI+FL A AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALHNAVSLGMAKDIRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G ++
Sbjct: 173 DYWGQ---LDLVRRETLTCYNGIK------GDGCGQCAACNLRANGLNQYLA 215
>gi|183601069|ref|ZP_02962562.1| hypothetical protein PROSTU_04692 [Providencia stuartii ATCC 25827]
gi|188019409|gb|EDU57449.1| hypothetical protein PROSTU_04692 [Providencia stuartii ATCC 25827]
Length = 232
Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 138/237 (58%), Gaps = 25/237 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALKMYDEVHCVTFDYGQRHRLEIEVAQKLSHSLGAAA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAATL 122
IL + +L +++ SSLT++ + + D N LP+TFVPGRNI+FL AA
Sbjct: 58 -----HKILDVNLLNELAVSSLTRD-NIPVPDYNESATNGLPSTFVPGRNILFLTLAAIY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AY++ ++ GVCETD+SGYPDCR + ++A+ A+NLG+ + TPLMWL K +TW
Sbjct: 112 AYQVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGLAKDIRFETPLMWLDKAQTWA 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA G + I E++ TCY G + G GC C AC+LR KG + +
Sbjct: 172 LADYYGH---LETIREQTLTCYNGIQ------GDGCGECAACHLRSKGLNYYLSHKE 219
>gi|168180210|ref|ZP_02614874.1| ExsB protein [Clostridium botulinum NCTC 2916]
gi|182669149|gb|EDT81125.1| ExsB protein [Clostridium botulinum NCTC 2916]
Length = 216
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 138/231 (59%), Gaps = 22/231 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA ++ V +SFDY Q++K+EL+C + KK
Sbjct: 3 KEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKKYN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A
Sbjct: 57 ----IEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ GI I+ GV ++D+SGYPDCR I+++ +NL M+ + TPLMW+ K ETWK+A
Sbjct: 113 QKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D+G D+V EE+ TCY G + GC CPAC LR+KG+ EF+
Sbjct: 173 YDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYWEFE 214
>gi|238791438|ref|ZP_04635076.1| Queuosine biosynthesis protein queC [Yersinia intermedia ATCC
29909]
gi|238729054|gb|EEQ20570.1| Queuosine biosynthesis protein queC [Yersinia intermedia ATCC
29909]
Length = 232
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 134/234 (57%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARALATQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + N +P+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKVLDVGMLNELAVSSLTRDSIPIPSFDEEDANTVPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAQTVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFVTPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A + V ++ TCY G + G GC C AC+LR KG +
Sbjct: 173 ADYYQQLERVR---HDTLTCYNGIQ------GDGCGQCAACHLRAKGLALYLAN 217
>gi|123443335|ref|YP_001007309.1| queuosine biosynthesis protein QueC [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|167016456|sp|A1JNM3|QUEC_YERE8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|122090296|emb|CAL13162.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 232
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 137/234 (58%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARELAIQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + ++++P+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKVLDVGMLNELAVSSLTRDNIPVPSYSEEGEDSIPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A ++ I ++ TCY G + G GC C AC+LR KG +
Sbjct: 173 ADYYQQ---LDRIRHDTLTCYNGIQ------GDGCGQCAACHLRAKGLEFYLAN 217
>gi|260596821|ref|YP_003209392.1| queuosine biosynthesis protein QueC [Cronobacter turicensis z3032]
gi|260215998|emb|CBA28662.1| Queuosine biosynthesis protein queC [Cronobacter turicensis z3032]
Length = 231
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 138/233 (59%), Gaps = 24/233 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ V
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEID---------VASALAAS 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ ++ + D LP+TFVPGRNI+FL A+ A
Sbjct: 53 LGARAHKVLDVTLLNELAVSSLTRD-SIPVPDYDPNAEGLPSTFVPGRNILFLTLASIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ A+ LGM V TPLMWL K ETW L
Sbjct: 112 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVALGMARDVRFETPLMWLNKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A G +++I +++ TCY G + G GC C AC+LR G +++
Sbjct: 172 ADYWG---KLDVIRQQTLTCYNGIQ------GDGCGECAACHLRANGLSQYQA 215
>gi|170021183|ref|YP_001726137.1| queuosine biosynthesis protein QueC [Escherichia coli ATCC 8739]
gi|194437541|ref|ZP_03069638.1| queuosine biosynthesis protein QueC [Escherichia coli 101-1]
gi|218553011|ref|YP_002385924.1| queuosine biosynthesis protein QueC [Escherichia coli IAI1]
gi|253774565|ref|YP_003037396.1| queuosine biosynthesis protein QueC [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160514|ref|YP_003043622.1| queuosine biosynthesis protein QueC [Escherichia coli B str.
REL606]
gi|297520136|ref|ZP_06938522.1| queuosine biosynthesis protein QueC [Escherichia coli OP50]
gi|300930253|ref|ZP_07145666.1| ExsB protein [Escherichia coli MS 187-1]
gi|189038914|sp|B1J004|QUEC_ECOLC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764340|sp|B7M3T7|QUEC_ECO8A RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169756111|gb|ACA78810.1| exsB protein [Escherichia coli ATCC 8739]
gi|194423710|gb|EDX39700.1| queuosine biosynthesis protein QueC [Escherichia coli 101-1]
gi|218359779|emb|CAQ97320.1| queuosine biosynthesis protein [Escherichia coli IAI1]
gi|242376226|emb|CAQ30917.1| enzyme in preQ[0] biosynthesis [Escherichia coli BL21(DE3)]
gi|253325609|gb|ACT30211.1| exsB protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972415|gb|ACT38086.1| predicted aluminum resistance protein [Escherichia coli B str.
REL606]
gi|253976625|gb|ACT42295.1| predicted aluminum resistance protein [Escherichia coli BL21(DE3)]
gi|300461825|gb|EFK25318.1| ExsB protein [Escherichia coli MS 187-1]
gi|323963434|gb|EGB58996.1| exsB protein [Escherichia coli H489]
gi|323972298|gb|EGB67508.1| exsB protein [Escherichia coli TA007]
Length = 231
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 137/232 (59%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC+ C AC LR G +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCSHCAACNLRANGLNHYLA 215
>gi|301063542|ref|ZP_07204068.1| protein ExsB [delta proteobacterium NaphS2]
gi|300442351|gb|EFK06590.1| protein ExsB [delta proteobacterium NaphS2]
Length = 228
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 118/243 (48%), Gaps = 33/243 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T + A V L+F YGQR+ VEL+ V +
Sbjct: 5 KEKAVVLLSGGLDSTTVAAIACSEGYDVFALTFRYGQRHAVELKAAEKVAHNL------- 57
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM------KIQDNNLPNTFVPGRNIIFLVFAAT 121
L E I+ L L I S+LT ++ + ++ + +P T+VP RN IFL +A
Sbjct: 58 --GLTEHLIVDLD-LRKIGGSALTDHIDVPKRRGAELSEEEIPVTYVPARNTIFLSYALA 114
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWL 175
A LG NI IGV DYSGYPDCR + I+A E NL ++ V + TP++++
Sbjct: 115 WAEVLGAWNIFIGVNAVDYSGYPDCRAEFIKAFEEMANLATKAGVTLTRRLKIRTPVIYM 174
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K +G + +H+CY D G C C +C LR+KG+ E
Sbjct: 175 SKGDIIKTGLKLG------VDYTLTHSCYDPSPD-----GKACGLCDSCLLRKKGFEEAG 223
Query: 236 EKY 238
++
Sbjct: 224 VEW 226
>gi|70732354|ref|YP_262110.1| queuosine biosynthesis protein QueC [Pseudomonas fluorescens Pf-5]
gi|110816206|sp|Q4K6M3|QUEC2_PSEF5 RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
gi|68346653|gb|AAY94259.1| exsB protein [Pseudomonas fluorescens Pf-5]
Length = 232
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 138/235 (58%), Gaps = 22/235 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A+++FSGGQDS+TCL AL +D V ++FDYGQR+ E+E + K++
Sbjct: 1 MKKTAVIVFSGGQDSTTCLIHALPLYDEVHCITFDYGQRHHAEIETAQRLSKQLGA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+L ++L +++ SSLT++ + +LP+TFVPGRNI+FL A+
Sbjct: 57 -----TVHKVLDASLLNELAISSLTRDNIPVPTVNSSGESLPSTFVPGRNILFLTLASIY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AY++ ++ GVCETD+SGYPDCR + ++A+ A+ LGME + + TPLMWL K ETW
Sbjct: 112 AYQVKAETVITGVCETDFSGYPDCRDEFVKALNKALELGMEYKLRLETPLMWLNKAETWA 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA + + L+ E++ TCY G G GC +C AC LR KG + E
Sbjct: 172 LAD---YHNQLELVREQTLTCYNGI------MGSGCANCDACNLRAKGLNAYLEN 217
>gi|146387132|pdb|2PG3|A Chain A, Crystal Structure Of Hypothetical Protein (Yp_049261.1)
From Erwinia Carotovora Subsp. Atroseptica Scri1043 At
2.40 A Resolution
Length = 232
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 136/233 (58%), Gaps = 24/233 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E+E + +K+
Sbjct: 3 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAA---- 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ ++ + D +PNTFVPGRNI+FL A+ A
Sbjct: 59 -----HKVLDVGLLNELATSSLTRD-SIPVPDYDANAQGIPNTFVPGRNILFLTLASIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPL WL K ETW L
Sbjct: 113 YQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLXWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A D V + TCY G + G GC C AC+LR G ++++
Sbjct: 173 ADYYQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQK 216
>gi|24374047|ref|NP_718090.1| queuosine biosynthesis protein QueC [Shewanella oneidensis MR-1]
gi|81461394|sp|Q8EE85|QUEC_SHEON RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24348521|gb|AAN55534.1|AE015692_4 exsB protein [Shewanella oneidensis MR-1]
Length = 238
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 92/224 (41%), Positives = 143/224 (63%), Gaps = 21/224 (9%)
Query: 17 GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
GGQDS+TCL AL ++D V ++FDYGQR++ E++ + +++ ++ +
Sbjct: 14 GGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIDVAKSLAQRL---------NITSHKV 64
Query: 77 LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ +++L +++ S+LT++ V+ ++ +N LPNTFVPGRNI+FL A AY+LG I+
Sbjct: 65 MDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLGAEAIIT 124
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
GVCETD+SGYPDCRHD +RA+E+A+ GM+ + + TPLMWL K +TW LA +
Sbjct: 125 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLNIITPLMWLNKAQTWALADKYQQ---L 181
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+L+ + TCY G G GC CPAC+LRQ+G ++ +
Sbjct: 182 DLVRHHTLTCYNGI------VGDGCGDCPACHLRQRGLDDYLQN 219
>gi|170760165|ref|YP_001786978.1| exsB protein [Clostridium botulinum A3 str. Loch Maree]
gi|254764325|sp|B1L1S2|QUEC_CLOBM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169407154|gb|ACA55565.1| exsB protein [Clostridium botulinum A3 str. Loch Maree]
Length = 219
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 143/234 (61%), Gaps = 22/234 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA +++ V +SFDY Q++K+EL+C + KK
Sbjct: 3 KEKAIVVFSGGQDSTTCLFWAKKKYEEVIAVSFDYNQKHKLELDCAKDICKKYN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E HIL L +L ++ +SLT+ V +PN+FV GRN++FL F A A
Sbjct: 57 ----VEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ G+ I+ GV ++D+SGYPDCR I+++ ++L M+ + TPLMW+ K ETWK+A
Sbjct: 113 QKGVNTIITGVSQSDFSGYPDCRAVFIKSLNVTLDLAMDYEFEIITPLMWINKAETWKMA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
D+G D+V EE+ TCY G + GC CPAC LR+KG++EF++++
Sbjct: 173 YDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKQF 217
>gi|23097767|ref|NP_691233.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
gi|81747126|sp|Q8ETE9|QUEC_OCEIH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|22775991|dbj|BAC12268.1| transcriptional regulator (exsB family) [Oceanobacillus iheyensis
HTE831]
Length = 221
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 116/233 (49%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++ SGG DS+TC+ + + +SF YGQR+ E+E V
Sbjct: 4 KKAVVILSGGLDSTTCMGVGKEAGYELYPISFHYGQRHDREIENAKKVASYF-------- 55
Query: 69 DSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ E + L L +I SSLT V+ + ++PNT+VPGRN IFL AA+ A
Sbjct: 56 -NVTEHKVFSLEFLKEIGGSSLTDQSMEVSQEGVGEDVPNTYVPGRNTIFLSIAASYAEA 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+G I +GV DYSGYPDCR + I A++ I G ++ +T+ PL+ L K +T KL
Sbjct: 115 IGAEKIYVGVSAVDYSGYPDCRPEFIEAMQQTIYQGTNANPAMTIEAPLIDLSKGDTVKL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ N+ + +CYLG + C C +C LR +G+ E
Sbjct: 175 GMKL------NVPYHLTTSCYLGGEE-------ACGECDSCRLRLQGFEEAGA 214
>gi|78224267|ref|YP_386014.1| ExsB [Geobacter metallireducens GS-15]
gi|110816228|sp|Q39R35|QUEC_GEOMG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78195522|gb|ABB33289.1| preQ(0) biosynthesis protein QueC [Geobacter metallireducens GS-15]
Length = 237
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 113/237 (47%), Gaps = 29/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L+SGG DS+TCL+ A +SF YGQR+ VELE + + +
Sbjct: 1 MHKKAVVLYSGGLDSTTCLAIARAEGYEPYAMSFSYGQRHSVELEQAKRNARPMGAV--- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
DH++ + S+LT ++A+ + +++P T+VP RN +FL FA A
Sbjct: 58 -------DHLVVEFDYRQVGGSALTSDIAVPKEGVGSDIPVTYVPARNTVFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKY 178
LG +I IGV DYSGYPDCR + I A E NL + +HTPL+ L K
Sbjct: 111 VLGAFDIFIGVNALDYSGYPDCRPEYIAAFEAMANLATKAGVEGKGRFRIHTPLIHLTKA 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + +G + +H+CY G C C +C LR KG+ E
Sbjct: 171 EIIRKGLSLG------VDYGRTHSCYD-----PTPEGLACGLCDSCRLRLKGFAEAG 216
>gi|218709346|ref|YP_002416967.1| queuosine biosynthesis protein [Vibrio splendidus LGP32]
gi|218322365|emb|CAV18513.1| Queuosine biosynthesis protein [Vibrio splendidus LGP32]
Length = 218
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 147/234 (62%), Gaps = 21/234 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ AL++FSGGQDS+TCL AL+ +D V ++FDYGQR+ E++ + + K++
Sbjct: 2 QQSKALVVFSGGQDSTTCLIDALNTYDEVHAITFDYGQRHSNEIDVAVSIGKEL------ 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ +L + + +++ SSLT++ V+ ++ +N+LPNTFVPGRNI+FL +A A
Sbjct: 56 ---NVKSHKVLDVTAINELAISSLTRDNIPVSNELSNNDLPNTFVPGRNIVFLTYACIHA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y+LGI +IV GVCETD+SGYPDCR IRA+ + NLGM++ + TPLMWL K ETW+L
Sbjct: 113 YQLGIKDIVTGVCETDFSGYPDCRDTFIRALNLSCNLGMDNAFNIKTPLMWLNKAETWEL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A + + + + + TCY G G GC CPAC LRQ G E+
Sbjct: 173 ADKH---NKLEYVEKNTLTCYNGI------LGKGCGECPACLLRQNGLKEYLAS 217
>gi|300721983|ref|YP_003711263.1| putative (aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Xenorhabdus nematophila ATCC
19061]
gi|297628480|emb|CBJ89045.1| putative (aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Xenorhabdus nematophila ATCC
19061]
Length = 232
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 142/236 (60%), Gaps = 23/236 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALRQYDEVHCVTFDYGQRHRAEIDVASRISKELGAAA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKI----QDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + + ++LPNTFVPGRNI+FL AA A
Sbjct: 58 -----HKVLDVTLLNELAISSLTRDNIPVPDFNASEKSDLPNTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + +RA+ A++LG+ + TPLMWL K ETW L
Sbjct: 113 YQVEAEAVITGVCETDFSGYPDCRDEFVRALNKAVSLGIARDIRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++ I ++ TCY G + G GC+ C AC+LR KG + + Q
Sbjct: 173 AD---YYKKLDFIRNQTLTCYNGIQ------GDGCSECAACHLRAKGLTNYLDNSQ 219
>gi|291616556|ref|YP_003519298.1| YbaX [Pantoea ananatis LMG 20103]
gi|291151586|gb|ADD76170.1| YbaX [Pantoea ananatis LMG 20103]
Length = 255
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + K+
Sbjct: 23 RAMKRAVVVFSGGQDSTTCLVQALQHYDEVHCVTFDYGQRHREEIDVARDLSLKLGARA- 81
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L + +L +++ SSLT++ A + + LP+TFVPGRNI+FL A+
Sbjct: 82 --------HKVLDVTMLNELAVSSLTRDSIPVPAYDPKASGLPSTFVPGRNILFLTLASV 133
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
AY++ ++ GVCETD+SGYPDCR + ++A+ AI LGM V TPLMWL K ETW
Sbjct: 134 YAYQVEAEAVITGVCETDFSGYPDCRDEFVKALNHAIGLGMARDVRFETPLMWLNKAETW 193
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA + LI EE+ TCY G + G GC C AC+LR G + +
Sbjct: 194 ALAD---YWQQLTLIREETLTCYNGIK------GDGCGECAACHLRSNGLNAYLQ 239
>gi|145633079|ref|ZP_01788811.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 3655]
gi|144986305|gb|EDJ92884.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 3655]
Length = 227
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 87/232 (37%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARAITQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLDYIQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|256823061|ref|YP_003147024.1| exsB protein [Kangiella koreensis DSM 16069]
gi|256796600|gb|ACV27256.1| exsB protein [Kangiella koreensis DSM 16069]
Length = 224
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 29/234 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + +SF+YGQR+ EL + + +
Sbjct: 1 MQKRAVVLLSGGLDSTTALAMAKSQGYDCYAMSFNYGQRSLAELNAAKKIAQSLDA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++HI+ + I S+LT +V + + +P T+VP RN +FL A A
Sbjct: 57 ------KEHIVVNLDMSQIGGSALTDHSIDVPTEGLEEGIPVTYVPARNTVFLSIALGWA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY 178
L +I IGV DYSGYPDCR + I+A ET NL ++ V + PL+ L K
Sbjct: 111 EVLKADHIFIGVNAVDYSGYPDCRPEFIKAFETMANLATKAGVEGQKLTIEAPLINLTKA 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ +G + ++ +CY D G C C +C LR++G+
Sbjct: 171 QIIAEGMTLG------VDYSQTVSCYKATDD-----GKACGVCDSCRLRKQGFE 213
>gi|258512334|ref|YP_003185768.1| exsB protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257479060|gb|ACV59379.1| exsB protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 227
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 30/236 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++ SGG DS+TC+ A + ++FDYGQR+++ELE V
Sbjct: 3 KAVVILSGGLDSATCMGIAHAAGYELCPITFDYGQRHRIELESAKKVAA---------FY 53
Query: 70 SLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + I+ + L I S+LT +V + +P T+VPGRN++FL AA+ A +
Sbjct: 54 GVKDHRIVSIDFLRQIGGSALTDESIDVPTEGVSREIPVTYVPGRNLLFLAIAASYAEVI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
G I IGV DYSGYPDCR + I +E + +G + + + TPL+ K E
Sbjct: 114 GAEAIYIGVNALDYSGYPDCRPEFIEGVEHVLRIGTKAGVEGRPIRIETPLLHWTKGEIV 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++G + E + +CY G C C +C LR KG+ E K
Sbjct: 174 RKGLELG------VPYELTTSCYQGGE-------VACGECDSCRLRLKGFAEAGAK 216
>gi|156935002|ref|YP_001438918.1| queuosine biosynthesis protein QueC [Cronobacter sakazakii ATCC
BAA-894]
gi|167016428|sp|A7MFJ8|QUEC_ENTS8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|156533256|gb|ABU78082.1| hypothetical protein ESA_02853 [Cronobacter sakazakii ATCC BAA-894]
Length = 231
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 133/232 (57%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ V
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEID---------VASALAAS 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ LP+TFVPGRNI+FL A+ AY
Sbjct: 53 LGARAHKVLDVTLLNELAVSSLTRDSIPVPDYDPDAEGLPSTFVPGRNILFLTLASIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+ LGM V TPLMWL K ETW LA
Sbjct: 113 QVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVALGMARDVRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G +++I ++ TCY G + G GC C AC+LR G +++
Sbjct: 173 DYWG---KLDVIRHQTLTCYNGIQ------GDGCGECAACHLRANGLSQYEA 215
>gi|189039057|sp|A4W7B5|QUEC_ENT38 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 231
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 133/233 (57%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL A AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPDADGIPNTFVPGRNILFLTLTAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALNHAVDLGMAKEIRFETPLMWLDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 D---YWEKLELVRTETLTCYNGIK------GDGCGQCAACNLRSNGLNHYLAN 216
>gi|90022170|ref|YP_527997.1| ExsB protein [Saccharophagus degradans 2-40]
gi|110816257|sp|Q21HP4|QUEC_SACD2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|89951770|gb|ABD81785.1| ExsB [Saccharophagus degradans 2-40]
Length = 225
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A TLSFDYGQR++VELE V K+
Sbjct: 2 SNKKAVILVSGGLDSTTALAIAQSEGYECYTLSFDYGQRHRVELEAAQRVSDKM------ 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLA 123
+ + ++ L L I S+LT + + + ++ +P T+VP RN +FL A A
Sbjct: 56 ---HVAQHKVVQLD-LKSIGGSALTDD-DIAVPEDGPEGIPVTYVPARNTVFLSIALGWA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY 178
L I IGV DYSGYPDCR + I A + L + V + TPL+ + K
Sbjct: 111 EVLNAEAIFIGVNAVDYSGYPDCRPEYIAAFQKLAMLATKVGVEGKPLQIKTPLIDMTKA 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E +L +G + + +CY D G C C +C LR+KG+ + +
Sbjct: 171 EIVQLGMRLG------VDYSATVSCYQANVD-----GEACGRCDSCRLRRKGFEDAQ 216
>gi|304395506|ref|ZP_07377389.1| exsB protein [Pantoea sp. aB]
gi|304356800|gb|EFM21164.1| exsB protein [Pantoea sp. aB]
Length = 231
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 92/230 (40%), Positives = 137/230 (59%), Gaps = 22/230 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL+++D V ++FDYGQR++ E+E + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALEQYDEVHCVTFDYGQRHREEIEVARDLASKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ A + + LP+TFVPGRNI+FL A+ AY
Sbjct: 58 -----HKVLDVTMLNELAVSSLTRDNIPVPAYNPEASGLPSTFVPGRNILFLTLASVYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM V TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAREVRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++L+ E++ TCY G + G GC C AC LR G +
Sbjct: 173 D---YWQQLSLVREQTLTCYNGVK------GDGCGECAACNLRANGLQGY 213
>gi|258649113|ref|ZP_05736582.1| ExsB protein [Prevotella tannerae ATCC 51259]
gi|260850762|gb|EEX70631.1| ExsB protein [Prevotella tannerae ATCC 51259]
Length = 226
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 129/229 (56%), Gaps = 16/229 (6%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL++FSGGQDS+TCL WA +F V LSF YGQ++ E+E C+ ++
Sbjct: 6 NERALVVFSGGQDSTTCLFWAKRQFKEVFALSFRYGQKHANEVELAECIAREAGVHFQSL 65
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ L + LG S + + + + + + PNTFVPGRN+ FL AA A
Sbjct: 66 EAPL-------IGQLGRNSLTDASLEMDAEQPEGSFPNTFVPGRNLFFLSIAAVYAREHD 118
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I ++V GV +TD+SGYPDCR ++++ +NL M+ +HTPLMW K TW LA ++
Sbjct: 119 IRHLVTGVSQTDFSGYPDCRDSFMKSLNVTLNLAMDEQFVIHTPLMWRDKAATWALADEL 178
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G +++L+ E+ TCY G + G GC CPAC LR++G E+
Sbjct: 179 G---VLDLVRNETLTCYNGVK------GDGCGHCPACTLRRRGLEEYLA 218
>gi|327392988|dbj|BAK10410.1| protein YbaX [Pantoea ananatis AJ13355]
Length = 231
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 135/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQHYDEVHCVTFDYGQRHREEIDVARDLSLKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ A + + LP+TFVPGRNI+FL A+ AY
Sbjct: 58 -----HKVLDVTMLNELAVSSLTRDSIPVPAYDPEASGLPSTFVPGRNILFLTLASVYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ AI LGM V TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNHAIGLGMARDVRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ LI EE+ TCY G + G GC C AC+LR G + +
Sbjct: 173 D---YWQQLTLIREETLTCYNGIK------GDGCGECAACHLRSNGLNAYLQ 215
>gi|218288779|ref|ZP_03493042.1| exsB protein [Alicyclobacillus acidocaldarius LAA1]
gi|218241137|gb|EED08313.1| exsB protein [Alicyclobacillus acidocaldarius LAA1]
Length = 227
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 30/236 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++ SGG DS+TC+ A + ++FDYGQR+++ELE V
Sbjct: 3 KAVVILSGGLDSATCMGIAHASGYELCPITFDYGQRHRIELESAKKVAA---------FY 53
Query: 70 SLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + I+ + L I S+LT +V + +P T+VPGRN++FL AA+ A +
Sbjct: 54 GVKDHRIVSIDFLRQIGGSALTDESIDVPTEGVSREIPVTYVPGRNLLFLAIAASYAEVI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
G I IGV DYSGYPDCR + I +E + +G + + + TPL+ K E
Sbjct: 114 GAEAIYIGVNALDYSGYPDCRPEFIEGVEHVLRIGTKAGVEGRPIRIETPLLHWTKGEIV 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++G + E + +CY G C C +C LR KG+ E K
Sbjct: 174 RKGLELG------VPYELTTSCYQGGD-------VACGECDSCRLRLKGFAEAGAK 216
>gi|251790642|ref|YP_003005363.1| exsB protein [Dickeya zeae Ech1591]
gi|247539263|gb|ACT07884.1| exsB protein [Dickeya zeae Ech1591]
Length = 231
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 22/232 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + + +
Sbjct: 3 SAVVVFSGGQDSTTCLIQALQQYDDVHCVTFDYGQRHRAEIDVAAALAQTLGARA----- 57
Query: 70 SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L + +L +++ SSLT++ + LP+TFVPGRNI+FL A+ AY+
Sbjct: 58 ----HKVLNVGLLNELAVSSLTRDNIPVPEFDATADGLPSTFVPGRNILFLTLASIYAYQ 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR + ++A+ A+ LG+ + TPLMWL K ETW LA
Sbjct: 114 VGADTVITGVCETDFSGYPDCRDEFVKALNQAVALGLAKDIRFVTPLMWLNKAETWALAD 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ V + TCY G + G GC C AC+LR KG E++
Sbjct: 174 YYQQLETVK---NHTLTCYNGIK------GTGCGQCAACHLRAKGLAEYQRN 216
>gi|145635040|ref|ZP_01790746.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittAA]
gi|229844854|ref|ZP_04464992.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
6P18H1]
gi|145267648|gb|EDK07646.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittAA]
gi|229812235|gb|EEP47926.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
6P18H1]
gi|309973345|gb|ADO96546.1| Probable 7-cyano-7-deazaguanine (preQ0) synthesis protein QueC
[Haemophilus influenzae R2846]
Length = 227
Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats.
Identities = 87/232 (37%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARAITQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVIKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ I + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLDYIQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|145641208|ref|ZP_01796788.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021]
gi|260582121|ref|ZP_05849915.1| queuosine biosynthesis protein queC [Haemophilus influenzae NT127]
gi|145274045|gb|EDK13911.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
22.4-21]
gi|260094753|gb|EEW78647.1| queuosine biosynthesis protein queC [Haemophilus influenzae NT127]
Length = 227
Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats.
Identities = 85/232 (36%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|145627828|ref|ZP_01783629.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
22.1-21]
gi|145639290|ref|ZP_01794896.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittII]
gi|144979603|gb|EDJ89262.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
22.1-21]
gi|145271593|gb|EDK11504.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittII]
gi|309751166|gb|ADO81150.1| Probable 7-cyano-7-deazaguanine (preQ0) synthesis protein QueC
[Haemophilus influenzae R2866]
Length = 227
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARSIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ +++ LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G ++N + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLNYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|253687450|ref|YP_003016640.1| exsB protein [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259551546|sp|C6DB62|QUEC_PECCP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|251754028|gb|ACT12104.1| exsB protein [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 231
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 24/232 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQHYDDVHCITFDYGQRHRAEIDIARELSLKLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ ++ + D +PNTFVPGRNI+FL A+ A
Sbjct: 56 ---TAHKVLDVGLLNELATSSLTRD-SIPVPDYDANAQGIPNTFVPGRNILFLTLASIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW L
Sbjct: 112 YQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A D V + TCY G + G GC C AC+LR G +++
Sbjct: 172 ADYYQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQ 214
>gi|303242853|ref|ZP_07329317.1| exsB protein [Acetivibrio cellulolyticus CD2]
gi|302589599|gb|EFL59383.1| exsB protein [Acetivibrio cellulolyticus CD2]
Length = 222
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 113/231 (48%), Gaps = 27/231 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++LFSGG DS+TCLS A V LSFDYGQR+K ELEC + K
Sbjct: 3 KAIVLFSGGLDSTTCLSVAFKEGYEVYPLSFDYGQRHKKELECVKQITK---------YY 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I+ + +G + + + V +P T+VP RNIIFL +AA A +
Sbjct: 54 KIKSNKIIRIDNVGGSALTDSSIEVPDYQGLPQIPVTYVPARNIIFLSYAAGYAEAIEAD 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKLA 184
I IGV DYSGYPDCR + I A E I +G + + + TPL+ L K E KLA
Sbjct: 114 AIYIGVNAVDYSGYPDCRPEFIEAFEKMIKVGTKRGVNGKPIKIETPLINLSKAEIIKLA 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ N L + +CY G+ C C +C LR KG+ E
Sbjct: 174 CE------NNAPLHLTTSCYKGEEK-------ACGVCDSCVLRLKGFKEAG 211
>gi|319776566|ref|YP_004139054.1| PP-loop superfamily ATPase [Haemophilus influenzae F3047]
gi|329124078|ref|ZP_08252625.1| transcription regulator ExsB [Haemophilus aegyptius ATCC 11116]
gi|317451157|emb|CBY87390.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae F3047]
gi|327467503|gb|EGF13001.1| transcription regulator ExsB [Haemophilus aegyptius ATCC 11116]
Length = 227
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 85/232 (36%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARSIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ +++ LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|227328854|ref|ZP_03832878.1| queuosine biosynthesis protein QueC [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 231
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 24/232 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR++ E++ + +K+
Sbjct: 2 KCAVVVFSGGQDSTTCLVQALQDYDDVHCITFDYGQRHRAEIDVARELSQKLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ ++ + D +PNTFVPGRNI+FL A+ A
Sbjct: 56 ---TAHKVLDVGLLNELATSSLTRD-SIPVPDYDANAQGIPNTFVPGRNILFLTLASIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++G ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL K ETW L
Sbjct: 112 YQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A D V + TCY G + G GC C AC+LR G +++
Sbjct: 172 ADYYQQLDTVRY---HTLTCYNGIK------GDGCGQCAACHLRANGLAQYQ 214
>gi|332160756|ref|YP_004297333.1| queuosine biosynthesis protein QueC [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604637|emb|CBY26135.1| queuosine Biosynthesis QueC ATPase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664986|gb|ADZ41630.1| queuosine biosynthesis protein QueC [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859941|emb|CBX70270.1| queuosine biosynthesis protein queC [Yersinia enterocolitica
W22703]
Length = 232
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 137/234 (58%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARELAIQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + ++++P+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKVLEVGMLNELAVSSLTRDNIPVPSYSEEGEDSIPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A ++ I ++ TCY G + G GC C AC+LR KG +
Sbjct: 173 ADYYQQ---LDRIRHDTLTCYNGIQ------GDGCGKCAACHLRAKGLEFYLAN 217
>gi|238751013|ref|ZP_04612509.1| Queuosine biosynthesis protein queC [Yersinia rohdei ATCC 43380]
gi|238710703|gb|EEQ02925.1| Queuosine biosynthesis protein queC [Yersinia rohdei ATCC 43380]
Length = 232
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 135/234 (57%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR+ E+E + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHSAEIEVARQLATQL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L + +L +++ SSLT++ + +N +PNTFVPGRNI+FL +A A
Sbjct: 54 -GVKAHKVLDVGMLNELAVSSLTRDSIPVPSYHEDDENAVPNTFVPGRNILFLTLSAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A D V ++ TCY G + G GC C AC+LR KG +
Sbjct: 173 ADYYQQLDRVR---HDTLTCYNGIQ------GDGCGQCAACHLRAKGLTFYLAN 217
>gi|311280659|ref|YP_003942890.1| exsB protein [Enterobacter cloacae SCF1]
gi|308749854|gb|ADO49606.1| exsB protein [Enterobacter cloacae SCF1]
Length = 231
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 134/230 (58%), Gaps = 22/230 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARTLALQLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL A AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPDADGIPNTFVPGRNILFLTLTAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPLMWL K +TW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWLDKAQTWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWG---KLDLVRNETLTCYNGVK------GDGCGQCAACNLRSNGLSHY 213
>gi|301169929|emb|CBW29533.1| predicted aluminum resistance protein [Haemophilus influenzae
10810]
Length = 227
Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats.
Identities = 85/232 (36%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ +++ LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G ++N + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLNYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|296101567|ref|YP_003611713.1| queuosine biosynthesis protein QueC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295056026|gb|ADF60764.1| queuosine biosynthesis protein QueC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 231
Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 136/233 (58%), Gaps = 24/233 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ ++ + D + +PNTFVPGRNI+FL A A
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRD-SIPVPDYKPDASGIPNTFVPGRNILFLTLTAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM TPLMWL K ETW L
Sbjct: 112 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKETRFETPLMWLDKAETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
A G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 172 ADYWG---KLDLVRSETLTCYNGIK------GDGCGQCAACNLRANGLNHYLA 215
>gi|293391376|ref|ZP_06635710.1| ExsB protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951910|gb|EFE02029.1| ExsB protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 276
Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats.
Identities = 91/240 (37%), Positives = 136/240 (56%), Gaps = 23/240 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ + AL++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + + +
Sbjct: 45 MSNQPNKALVIFSGGQDSTTCLFLAMQEFGAENVEVITFQYGQRHAIELEKARWIAQDLK 104
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ +L +++ I+H++L N + +DN LPNTFV GRN +FL++AA
Sbjct: 105 ----------VKQTVLDTSVIKAITHNALMDPNAPISQKDNELPNTFVDGRNALFLLYAA 154
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K ET
Sbjct: 155 IYAKSQGIRVIYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYPFEIRTPLMWLDKKET 214
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
W LA +G + I +HTCY G GC CP+C LR++G + + ++
Sbjct: 215 WALADQLGAF---DYIRRHTHTCYNGVEG-------GCGECPSCVLRERGLKAYLPEREE 264
>gi|212709204|ref|ZP_03317332.1| hypothetical protein PROVALCAL_00237 [Providencia alcalifaciens DSM
30120]
gi|212688116|gb|EEB47644.1| hypothetical protein PROVALCAL_00237 [Providencia alcalifaciens DSM
30120]
Length = 233
Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 138/236 (58%), Gaps = 23/236 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALKDYDEVHCVTFDYGQRHRLEIEVAQKLSLQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L +++L +++ SSLT++ + + + LP+TFVPGRNI+FL +A A
Sbjct: 56 ---KAHKVLDVSLLNELAISSLTRDNIPVPDYEESEASGLPSTFVPGRNILFLTLSAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ A+NLG+ + TPLMWL K +TW L
Sbjct: 113 YQVNAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGLAKDIRFETPLMWLDKAQTWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A G + I ++ TCY G + G GC C AC+LR KG + Q
Sbjct: 173 ADYYGH---LETIRTQTLTCYNGIQ------GDGCAECAACHLRSKGLNYYLNNKQ 219
>gi|148266057|ref|YP_001232763.1| exsB protein [Geobacter uraniireducens Rf4]
gi|189038915|sp|A5G8S2|QUEC_GEOUR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|146399557|gb|ABQ28190.1| preQ(0) biosynthesis protein QueC [Geobacter uraniireducens Rf4]
Length = 228
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 116/237 (48%), Gaps = 29/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L+SGG DS+TC++ A +SF YGQR+K ELE K + +
Sbjct: 1 MPKKAVILYSGGLDSTTCMAIAKAEGFEPYAMSFAYGQRHKAELELAKGNAKPMGAV--- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
+H++ L + S+LT + + + N++P T+VP RN IFL FA A
Sbjct: 58 -------EHMVVEFDLRKMGGSALTAEIDVPKEGVGNDIPVTYVPARNTIFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKY 178
LG +I IGV DYSGYPDCR + I A ET NL ++ V +HTPL+ L K
Sbjct: 111 TLGAFDIFIGVNALDYSGYPDCRPEYIAAFETMANLATKAGVEGAGRFTIHTPLIHLTKA 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + +G + +H+CY D+ C C +C LR KG+ E
Sbjct: 171 EIIRKGLSLG------VDYGRTHSCYDPTADE-----LACGRCDSCRLRLKGFAEAG 216
>gi|145637056|ref|ZP_01792719.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittHH]
gi|145269710|gb|EDK09650.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittHH]
Length = 227
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKACAIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|332975982|gb|EGK12854.1| transcription regulator ExsB [Desmospora sp. 8437]
Length = 231
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 31/240 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A A+++ SGG DS+TC+ A + + L+F YGQR+ E+E V K
Sbjct: 1 MAEKAVVVLSGGLDSTTCMGLAREAGYELYPLTFHYGQRHDREVEQARKVAKHF------ 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQD---NNLPNTFVPGRNIIFLVFAATL 122
+ + ++ + L I S+LT + + + + D +P+T+VP RN+IFL A
Sbjct: 55 ---GVKKHRVVDMGFLRQIGGSALTDDKMEVPVPDGSGEEIPSTYVPARNLIFLSLATAY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
A +G + IGV DYSGYPDCR + IR++E + G + + + + PL+ L K
Sbjct: 112 AEVIGAVKVYIGVSAVDYSGYPDCRPEFIRSMEETVRRGTKAGVNGNPIRLEAPLLHLSK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
ET + + + + +CY G R C C +C LR KG+ + +
Sbjct: 172 GETIREGLRL------QVPYHLTTSCYRGDR-------VACGLCDSCRLRLKGFRDVGAE 218
>gi|319897342|ref|YP_004135538.1| pp-loop superfamily atpase [Haemophilus influenzae F3031]
gi|317432847|emb|CBY81212.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae F3031]
Length = 227
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ +++ LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|95929965|ref|ZP_01312705.1| ExsB [Desulfuromonas acetoxidans DSM 684]
gi|95133934|gb|EAT15593.1| ExsB [Desulfuromonas acetoxidans DSM 684]
Length = 227
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 80/239 (33%), Positives = 118/239 (49%), Gaps = 30/239 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L+SGG DS+TCL+WA + LSF YGQR+ +ELE ++
Sbjct: 1 MSKKAIVLYSGGLDSTTCLAWAKAQGMTPYALSFRYGQRHSIELEKAESFAPQMGA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLA 123
E H++ L I S+LT ++ + D +P T+VP RN IFL + A
Sbjct: 57 ------EQHLIVDIDLRKIGGSALTADIEVPKDRQIDEAIPVTYVPARNTIFLSYGLAWA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKK 177
LG +IVIGV DYSGYPDCR + I A + NL ++ V +HTPL+ L K
Sbjct: 111 EALGAFDIVIGVNALDYSGYPDCRPEFIEAYQNMANLATKAAVEGSGQYQIHTPLLHLSK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ ++ D+G + +H+CY D G C C +C LR G+ + +
Sbjct: 171 ADIIRMGTDLG------VDYALTHSCYDPAPD-----GRACGRCDSCVLRLNGFAQAGQ 218
>gi|229917716|ref|YP_002886362.1| exsB protein [Exiguobacterium sp. AT1b]
gi|259551529|sp|C4L0V4|QUEC_EXISA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|229469145|gb|ACQ70917.1| exsB protein [Exiguobacterium sp. AT1b]
Length = 214
Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 141/230 (61%), Gaps = 20/230 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ AL++FSGGQDS+TCL WA +F VE ++F YGQR+ E+E + ++
Sbjct: 2 QHEKALVVFSGGQDSTTCLFWAKQQFSHVEAVTFAYGQRHDAEIEVAKEIAAELD----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
HIL L++LG ++ ++LT++ + I + ++PNTFV GRN +FL FAA +A +L
Sbjct: 57 -----VPHHILDLSLLGQLTSNALTRH-DLDIDNADVPNTFVDGRNHLFLSFAAVMAKQL 110
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ +IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW LA +
Sbjct: 111 GMHHIVTGVCETDFSGYPDCRDQFIKSLNVTLNLAMDYPFVIDTPLMWLDKKETWALADE 170
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G D V E + TCY G G GC CPAC LRQ G ++E
Sbjct: 171 LGAFDYVK---ERTLTCYNGV------IGSGCGECPACKLRQNGLTAYEE 211
>gi|295096770|emb|CBK85860.1| preQ(0) biosynthesis protein QueC [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 231
Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 133/230 (57%), Gaps = 22/230 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL A AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPDASGIPNTFVPGRNILFLTLTAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM TPLMWL K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVDLGMAKETRFETPLMWLDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G ++++ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWG---KLDVVRNETLTCYNGIK------GDGCGQCAACNLRANGLNHY 213
>gi|37527722|ref|NP_931067.1| queuosine biosynthesis protein QueC [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|81418478|sp|Q7N0M0|QUEC_PHOLL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|36787158|emb|CAE16234.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 232
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 85/232 (36%), Positives = 140/232 (60%), Gaps = 25/232 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A++++D V ++FDYGQR++ E++ V +
Sbjct: 2 RRAVVVFSGGQDSTTCLIQAINQYDEVHCVTFDYGQRHRAEIDVARNVSHFL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNIIFLVFAATL 122
+ +L + +L +++ SSLT++ + + D++ +P+TFVPGRNI+FL AA
Sbjct: 54 -GVVAHKVLDVTLLNELALSSLTRD-NIPVPDHSESEKSAIPSTFVPGRNILFLTLAAIY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AY++ ++ GVCETD+SGYPDCR + ++A+ A++LG+ + TPLMWL K ETW
Sbjct: 112 AYQVEAEAVITGVCETDFSGYPDCRDEFVKALNKAVSLGIARDIRFETPLMWLNKAETWA 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L+ ++ + ++ TCY G + G GC +C AC+LR G ++
Sbjct: 172 LSDYYQH---LDFVRSQTLTCYNGIQ------GNGCGTCAACHLRANGLEQY 214
>gi|148826200|ref|YP_001290953.1| PP-loop superfamily ATPase [Haemophilus influenzae PittEE]
gi|229846222|ref|ZP_04466334.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
7P49H1]
gi|189038917|sp|A5UCR9|QUEC_HAEIE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148716360|gb|ABQ98570.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
PittEE]
gi|229811226|gb|EEP46943.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
7P49H1]
Length = 227
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIVQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G ++N + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLNYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|290474656|ref|YP_003467536.1| putative (aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Xenorhabdus bovienii SS-2004]
gi|289173969|emb|CBJ80756.1| putative (aluminum) resistance protein with adenine nucleotide
alpha hydrolase domain [Xenorhabdus bovienii SS-2004]
Length = 232
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 137/236 (58%), Gaps = 23/236 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALRQYDEVHCVTFDYGQRHRAEIDVACRISKELGAAA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + + LPNTFVPGRNI+FL AA A
Sbjct: 58 -----HKVLDVTLLSELAISSLTRDNIPVPDFSESEKSGLPNTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ A+ LG+ + TPLMWL K ETW L
Sbjct: 113 YQVEAEAVITGVCETDFSGYPDCRDEFVKALNKAVCLGIARDIRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A +N + ++ TCY G + G GC+ C AC+LR G + Q
Sbjct: 173 AD---YYQKLNFVRTQTLTCYNGIQ------GDGCSECAACHLRANGLNLYLNNTQ 219
>gi|68249737|ref|YP_248849.1| PP-loop superfamily ATPase [Haemophilus influenzae 86-028NP]
gi|81335834|sp|Q4QLA8|QUEC_HAEI8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|68057936|gb|AAX88189.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
86-028NP]
Length = 227
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 85/232 (36%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIVQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221
>gi|261341045|ref|ZP_05968903.1| ExsB protein [Enterobacter cancerogenus ATCC 35316]
gi|288316911|gb|EFC55849.1| ExsB protein [Enterobacter cancerogenus ATCC 35316]
Length = 231
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 132/232 (56%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVARELALNLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL A AY
Sbjct: 58 -----HKVLDVNLLNELAVSSLTRDSIPVPDYEPDASGIPNTFVPGRNILFLTLTAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM TPLMWL K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKETRFETPLMWLDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G +
Sbjct: 173 DYWG---KLDLVRSETLTCYNGIK------GDGCGQCAACNLRANGLNHYLA 215
>gi|238893393|ref|YP_002918127.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae
NTUH-K2044]
gi|238545709|dbj|BAH62060.1| putative (aluminum) resistance protein [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 233
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 22/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + K+ +
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + +PNTFVPGRNI+FL A AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ I+ GVCETD+SGYPDCR + ++A+ A++LGM + TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
G ++L+ E+ TCY G + G GC C AC LR G ++
Sbjct: 173 DYWGQ---LDLVRRETLTCYNGIK------GDGCGQCAACNLRANGRNQYLA 215
>gi|301156476|emb|CBW15947.1| predicted aluminum resistance protein [Haemophilus parainfluenzae
T3T1]
Length = 225
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 92/240 (38%), Positives = 139/240 (57%), Gaps = 24/240 (10%)
Query: 1 MNDII-KKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
MN AL++FSGGQDS+TCL A+ + + VET++F YGQR+ +ELE +
Sbjct: 1 MNTSNPNHNRKALVIFSGGQDSTTCLIQAIAEYGVENVETVTFQYGQRHAIELEKARWIA 60
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFL 116
+ + + ++ +++ I+H++L N ++ +D LPNTFV GRN +FL
Sbjct: 61 QDLG----------VKQTLIDTSVIKSITHNALMDVNADIEQKDGELPNTFVDGRNALFL 110
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
++AA A GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L
Sbjct: 111 LYAAIYAKGQGINDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPFNLKTPLMYLT 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K +TW LA ++G ++ I + +HTCY G GC CP+C LR KG E+
Sbjct: 171 KAQTWSLADELGA---LDYIRQHTHTCYEGVEG-------GCGECPSCKLRDKGLQEYLA 220
>gi|206889348|ref|YP_002248069.1| ExsB protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741286|gb|ACI20343.1| ExsB protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 224
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 110/234 (47%), Gaps = 25/234 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DSST L A LSFDYGQR+K+E+E V K I
Sbjct: 2 KKAVILLSGGIDSSTTLIIAKSEGFECYALSFDYGQRHKIEIEAAKKVAKHIG------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
++H++ L I S+LT + + ++ +P T+VP RN IFL F A L
Sbjct: 55 ---VKEHLIVSFDLRKIGGSALTSKMEIPKEEIEGIPITYVPARNTIFLSFGLAWAEVLQ 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYETW 181
NI IG DYSGYPDCR + ++A E NL + ++ PL++L K E
Sbjct: 112 CPNIFIGANIVDYSGYPDCRPEYLQAFERMANLATKISVEGTLKFKINAPLLYLTKSEII 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K ++G L + +CY + D C CP+C R KG+ E
Sbjct: 172 KKGIELG------LDYSLTWSCYDPQGDPENPS--PCLKCPSCIYRLKGFKEAG 217
>gi|52425910|ref|YP_089047.1| hypothetical protein MS1855 [Mannheimia succiniciproducens MBEL55E]
gi|52307962|gb|AAU38462.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 251
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 86/233 (36%), Positives = 138/233 (59%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + + +
Sbjct: 39 RKAVVIFSGGQDSTTCLLKAIADYGVENVEAVTFQYGQRHAIELEKAKWIAQDLG----- 93
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +++ I+ +++ N+ + + +PNTFV GRN +FL++ A A
Sbjct: 94 -----IKQTLIDTSVIKTITANAMMDNIKITKDEAGMPNTFVDGRNALFLLYTAIYAKGQ 148
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLM+L K +TW+LA +
Sbjct: 149 GIRDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIHTPLMYLTKAQTWQLADE 208
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G +N + E +HTCYLG GC SCP+C LR+ G ++ Q
Sbjct: 209 LGA---LNYVREHTHTCYLGVEG-------GCGSCPSCILRENGLQQYLASKQ 251
>gi|242240286|ref|YP_002988467.1| exsB protein [Dickeya dadantii Ech703]
gi|242132343|gb|ACS86645.1| exsB protein [Dickeya dadantii Ech703]
Length = 231
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 137/233 (58%), Gaps = 22/233 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + +++
Sbjct: 4 AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDAAAELTQRLGARA------ 57
Query: 71 LGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
IL + +L ++ SSLT++ LP+TFVPGRNI+FL A+ AY++
Sbjct: 58 ---HKILNVELLNQLAVSSLTRDSIPVPEYDETSEGLPSTFVPGRNILFLTLASIYAYQV 114
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +++ GVCETD+SGYPDCR + ++A+ A++LG+ + TPLMWL K ETW LA
Sbjct: 115 GAESVITGVCETDFSGYPDCRDEFVKALNQAVSLGLAREIRFVTPLMWLNKAETWALAD- 173
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++ + + TCY G + G GC C AC+LR +G ++++
Sbjct: 174 --YYHQLDTVKHHTLTCYNGIK------GEGCGQCAACHLRAQGLTQYQQNRA 218
>gi|238783602|ref|ZP_04627623.1| Queuosine biosynthesis protein queC [Yersinia bercovieri ATCC
43970]
gi|238715480|gb|EEQ07471.1| Queuosine biosynthesis protein queC [Yersinia bercovieri ATCC
43970]
Length = 232
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 89/237 (37%), Positives = 135/237 (56%), Gaps = 23/237 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 RRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARELATQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + +P+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKVLDVGMLNELAVSSLTRDSIPVPTYNEEDTDAVPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A D V ++ TCY G + G GC C AC+LR KG + +
Sbjct: 173 ADYYQQLDRVR---NDTLTCYNGIQ------GDGCGECAACHLRAKGLAFYLANKPN 220
>gi|238897963|ref|YP_002923643.1| queuosine biosynthesis protein, ExsB domain protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465721|gb|ACQ67495.1| queuosine biosynthesis protein, ExsB domain protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 236
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 97/243 (39%), Positives = 144/243 (59%), Gaps = 25/243 (10%)
Query: 5 IKKA---PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
++K A+L+FSGGQDS+TCL AL ++D V ++FDY QR++ E+ + KK+
Sbjct: 1 MRKNNPIKRAVLVFSGGQDSTTCLIQALHQYDEVHCITFDYAQRHRSEIAIAQALAKKL- 59
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQ---DNNLPNTFVPGRNIIFLV 117
IL L +L +++ SSLT +N+ + + + +LPNTFVPGRNI+FL
Sbjct: 60 --------QATSYKILDLQLLNELTVSSLTRENIPLPKKQNSEGSLPNTFVPGRNIVFLT 111
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
F+A AY+L ++ GVCETD+SGYPDCR + ++++ A+ LGM+ ++T TPLMWL K
Sbjct: 112 FSAIYAYQLDADVVITGVCETDFSGYPDCRDEFVKSLNHAVTLGMQKNITFVTPLMWLNK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
ETW LA + LI ++ TCY G + G GC C +C LR KG +
Sbjct: 172 AETWALADYYQQ---MPLIRNKTLTCYNGIQ------GDGCGECLSCELRLKGLKYYLAH 222
Query: 238 YQD 240
++
Sbjct: 223 KEE 225
>gi|88705615|ref|ZP_01103325.1| secreted protein [Congregibacter litoralis KT71]
gi|88700128|gb|EAQ97237.1| secreted protein [Congregibacter litoralis KT71]
Length = 226
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + A++L SGG DS+T L+ A ++ +LSFDYGQR++ EL V K + ++
Sbjct: 1 MNSSKKAVVLVSGGLDSTTVLALAREQGYECYSLSFDYGQRHRAELFAAERVSKTLGDV- 59
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+H + L I S+LT + +P T+VP RN +FL A
Sbjct: 60 ---------EHKVVRLNLDSIGGSALTDENIAVPEEASEGIPVTYVPARNTVFLSIALGW 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKK 177
A LG +I IGV DYSGYPDCR I A + N+ +HTPLM L K
Sbjct: 111 AEVLGAQDIFIGVNAVDYSGYPDCRPAFIDAFQQLANVATQVGVEGGRYEIHTPLMDLGK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ KL +G + ++ +CY D G C C AC LR++G++
Sbjct: 171 DDIVKLGARLG------VDYSQTVSCYQATDD-----GLACGVCDACRLRREGFVNAG 217
>gi|238759255|ref|ZP_04620422.1| Queuosine biosynthesis protein queC [Yersinia aldovae ATCC 35236]
gi|238702542|gb|EEP95092.1| Queuosine biosynthesis protein queC [Yersinia aldovae ATCC 35236]
Length = 232
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 87/236 (36%), Positives = 135/236 (57%), Gaps = 23/236 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARKLAIQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + ++++P+TFVPGRNI+FL A A
Sbjct: 56 ---KAHKVLDVGMLNELAVSSLTRDSIPVPTFDEEDEDSVPSTFVPGRNILFLTLTAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR ++A+ AI+LG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAEAVITGVCETDFSGYPDCRDKFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++L+ + TCY G + G GC C AC+LR KG +
Sbjct: 173 ADYYQQ---LDLVRHHTLTCYNGIQ------GEGCGQCAACHLRAKGLSHYLANKA 219
>gi|152979669|ref|YP_001345298.1| exsB protein [Actinobacillus succinogenes 130Z]
gi|189038890|sp|A6VQW6|QUEC_ACTSZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|150841392|gb|ABR75363.1| exsB protein [Actinobacillus succinogenes 130Z]
Length = 235
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 141/232 (60%), Gaps = 22/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
A+++FSGGQDS+TCL A+ + VE ++F YGQR+ +EL+ + + +
Sbjct: 9 NRKAVVIFSGGQDSTTCLLQAIRDYGPNNVEAVTFQYGQRHAIELQKAQWIAQDLG---- 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+ +++ + +K +N +PNTFV GRN +FL++AA A
Sbjct: 65 ------VKQTLIDTSVIKTITTNAMMSDAQIKQDENGMPNTFVDGRNALFLLYAAIYAKG 118
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GIT+I+ GVCETD+SGYPDCR+ I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 119 QGITDIITGVCETDFSGYPDCRNVFIKSMNVTLNLAMDYQFNIRTPLMYLTKAQTWQLAD 178
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G ++ + + +HTCYLG GC +CP+C LR+KG ++ +
Sbjct: 179 ELGA---LDYVRQYTHTCYLGVEG-------GCGTCPSCLLREKGLKQYLAQ 220
>gi|253990884|ref|YP_003042240.1| queuosine biosynthesis protein QueC [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253782334|emb|CAQ85498.1| Queuosine biosynthesis protein queC [Photorhabdus asymbiotica]
Length = 232
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 140/236 (59%), Gaps = 23/236 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A++++D V ++FDYGQR+ E++ + + +
Sbjct: 2 RRAVVVFSGGQDSTTCLIQAINQYDEVHCITFDYGQRHCAEIDVARNISRSL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L + +L +++ SSLT+N + + + +PNTFVPGRNI+FL AA A
Sbjct: 54 -GVVAHKVLDITLLNELALSSLTRNNIPIPNYNESEKSTIPNTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ A++LG+ + TPLMWL K ETW L
Sbjct: 113 YQVEAETVITGVCETDFSGYPDCRDEFVKAMNKAVSLGIARDIRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+ ++ + ++ TCY G + G GC +C AC+LR G ++ + +
Sbjct: 173 SDYYQH---LDFVRSQTLTCYNGIQ------GNGCGTCAACHLRTSGLEQYLDAPE 219
>gi|239906319|ref|YP_002953060.1| putative aluminum resistance protein [Desulfovibrio magneticus
RS-1]
gi|259551518|sp|C4XPJ3|QUEC_DESMR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|239796185|dbj|BAH75174.1| putative aluminum resistance protein [Desulfovibrio magneticus
RS-1]
Length = 235
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 120/240 (50%), Gaps = 33/240 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++LFSGG DS+TCL+ A LSF+YGQR+KVELE V K +
Sbjct: 6 PQKAVVLFSGGLDSTTCLAVARRDGFLPCALSFEYGQRHKVELEAARRVAKAMA------ 59
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAAT 121
+ ILPL LG I S+LT ++ + + ++P T+VP RN IFL A
Sbjct: 60 ---VTTHLILPLP-LGSIGGSALTADIDVPKDRDIGEMEADIPVTYVPARNTIFLSMALG 115
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWL 175
A LG ++I IGV DYSGYPDCR + I A E NL ++ + +HTPL+ L
Sbjct: 116 WAEVLGASDIYIGVNALDYSGYPDCRPEFIAAFEAMANLAVKEAVEGRLAIRIHTPLLHL 175
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K +L +G + +H+CY D G C C +C LR+KG+ E
Sbjct: 176 SKAGIVELGTSLG------VDYGLTHSCYDPAPD-----GLACGRCDSCLLRRKGFEEAG 224
>gi|322421610|ref|YP_004200833.1| exsB protein [Geobacter sp. M18]
gi|320127997|gb|ADW15557.1| exsB protein [Geobacter sp. M18]
Length = 229
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 115/236 (48%), Gaps = 28/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L+SGG DS+TCL+ A + LSF YGQR++ EL + + +
Sbjct: 1 MKKKAVILYSGGLDSTTCLAIARHQGFEPYALSFSYGQRHQHELAVAKLNARPMGAV--- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
DH+L L + S+LT ++ + ++P T+VP RN IFL FA A
Sbjct: 58 -------DHLLVDFDLRKMGGSALTSDIEVPKAGVGEDIPVTYVPARNTIFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
LG +I IGV DYSGYPDCR + I A E NL ++ V +HTPL+ L K E
Sbjct: 111 TLGCFDIFIGVNALDYSGYPDCRPEFIAAYEAMANLATKAGVEGKRMTIHTPLISLSKAE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K +G + ++H+CY D G C C +C LR KG+ E
Sbjct: 171 IIKTGLTLG------VDYGKTHSCYDPSED-----GAACGLCDSCRLRLKGFAELG 215
>gi|303247445|ref|ZP_07333717.1| exsB protein [Desulfovibrio fructosovorans JJ]
gi|302491141|gb|EFL51033.1| exsB protein [Desulfovibrio fructosovorans JJ]
Length = 233
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 83/244 (34%), Positives = 120/244 (49%), Gaps = 33/244 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A++LFSGG DS+TCL+ A + LSF YGQR++VEL+ V +
Sbjct: 1 MTTPEKKAVVLFSGGLDSTTCLAVAREEGFAPCALSFAYGQRHEVELQAAKRVAAAM--- 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLV 117
++ +LPL LG I S+LT ++A+ + +P T+VP RN IFL
Sbjct: 58 ------NVAAHLVLPLP-LGAIGGSALTADIAVPKDRDVAAMEAEIPVTYVPARNTIFLS 110
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTP 171
A A LG +I IGV DYSGYPDCR + A E NL ++ +++HTP
Sbjct: 111 MALGWAEVLGAQDIYIGVNALDYSGYPDCRPQFVAAFEAMANLAVKEAVEGHLRISIHTP 170
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ L K + +L +G + +H+CY G C C +C LR+KG+
Sbjct: 171 LLHLTKADIVRLGTRLG------VDYGLTHSCYDPD-----PSGLACGRCDSCLLRKKGF 219
Query: 232 MEFK 235
E
Sbjct: 220 AEAG 223
>gi|298504610|gb|ADI83333.1| 7-cyano-7-deazaguanine synthase [Geobacter sulfurreducens KN400]
Length = 237
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L+SGG DS+TCL+ A +SF YGQR+ VELE + +
Sbjct: 1 MTRKAVVLYSGGLDSTTCLAIARAEGFEPHAMSFSYGQRHSVELELAKRNARPAGAV--- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
+H++ L + S+LT ++A+ + +++P T+VP RN IFL FA A
Sbjct: 58 -------EHMVVEFDLRKVGGSALTADIAVPKEGVGDDIPVTYVPARNTIFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKY 178
LG +I IGV DYSGYPDCR + I A ET NL +H PLM L K
Sbjct: 111 VLGAFDIFIGVNALDYSGYPDCRPEYISAFETMANLATRLGVEGTGRFRIHAPLMRLTKA 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + +G + +H+CY G C C +C LR KG+ E
Sbjct: 171 EIIRKGLALG------VDYGLTHSCYD-----PSPAGVACGLCDSCRLRLKGFAEVG 216
>gi|237800230|ref|ZP_04588691.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|237806418|ref|ZP_04593122.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023087|gb|EGI03144.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027531|gb|EGI07586.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 229
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 28/242 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN++ A++L SGG DS+T ++ AL T+SFDYGQR++ EL+ V + +
Sbjct: 1 MNELTNTGKRAVILLSGGLDSATVVAMALAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGSALG------VDYSLTVSCYQAD-----DQGRACGKCDSCRLRAEGFSA 219
Query: 234 FK 235
Sbjct: 220 AG 221
>gi|254414877|ref|ZP_05028641.1| exsB protein [Microcoleus chthonoplastes PCC 7420]
gi|196178366|gb|EDX73366.1| exsB protein [Microcoleus chthonoplastes PCC 7420]
Length = 232
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 110/241 (45%), Gaps = 35/241 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A++L SGG DSST L A +SFDY QR++ ELE + + K
Sbjct: 5 KMSKAVVLLSGGLDSSTVLYQAKAEGYECYAISFDYQQRHQRELESAIAIAKGAG----- 59
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFA 119
+ H + L S+LT + +++ ++P T+VP RN IFL F
Sbjct: 60 -----VKYHQVVRFDLSQWGGSALTDDTLDLPQTRSLQQMSQSIPITYVPARNTIFLSFG 114
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMW 174
+ A +G T + +GV DYSGYPDCR D I+A++ LG + + + TPL+
Sbjct: 115 LSYAEAIGATALYLGVNALDYSGYPDCRPDYIQAMQEVFRLGTKQGREGEPIQIITPLIQ 174
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LKK E +L +G + E+ +CY G C C +C LR + E
Sbjct: 175 LKKTEIIELGNKLG------VPWHETWSCYAGDE-------VACGVCDSCRLRLAAFAEL 221
Query: 235 K 235
Sbjct: 222 G 222
>gi|261867499|ref|YP_003255421.1| ExsB protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412831|gb|ACX82202.1| ExsB protein [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 234
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 91/240 (37%), Positives = 135/240 (56%), Gaps = 23/240 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ + AL++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + + +
Sbjct: 1 MSNQPNKALVIFSGGQDSTTCLFLAMQEFGAENVEVITFQYGQRHVIELEKARWIAQDLK 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ +L +++ I+H++L N + +DN LPNTFV GRN +FL++AA
Sbjct: 61 ----------VKQTVLDTSVIKAITHNALMDPNAPISQKDNELPNTFVDGRNALFLLYAA 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+SGYPDCR ++++ +NL M + TPLMWL K ET
Sbjct: 111 IYAKSQGIRVIYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMAYPFEIRTPLMWLDKKET 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
W LA +G + I +HTCY G GC CP+C LR++G + + ++
Sbjct: 171 WALADQLGAF---DYIRRHTHTCYNGVEG-------GCGECPSCVLRERGLKAYLPEREE 220
>gi|110816231|sp|Q65RE8|QUEC_MANSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 222
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 86/233 (36%), Positives = 138/233 (59%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + + +
Sbjct: 10 RKAVVIFSGGQDSTTCLLKAIADYGVENVEAVTFQYGQRHAIELEKAKWIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ +++ I+ +++ N+ + + +PNTFV GRN +FL++ A A
Sbjct: 65 -----IKQTLIDTSVIKTITANAMMDNIKITKDEAGMPNTFVDGRNALFLLYTAIYAKGQ 119
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ +HTPLM+L K +TW+LA +
Sbjct: 120 GIRDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIHTPLMYLTKAQTWQLADE 179
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G +N + E +HTCYLG GC SCP+C LR+ G ++ Q
Sbjct: 180 LGA---LNYVREHTHTCYLGVEG-------GCGSCPSCILRENGLQQYLASKQ 222
>gi|219871540|ref|YP_002475915.1| queuosine biosynthesis protein QueC [Haemophilus parasuis SH0165]
gi|254764350|sp|B8F6L5|QUEC_HAEPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|219691744|gb|ACL32967.1| queuosine biosynthesis protein QueC [Haemophilus parasuis SH0165]
Length = 219
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 91/238 (38%), Positives = 138/238 (57%), Gaps = 22/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +EL+ + + +
Sbjct: 1 MKPTPKAVVIFSGGQDSTTCLFLAIKEFGKENVEVVTFQYGQRHAIELDKARWIAQDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ +++ I+ ++L + A Q N PNTFV GRN +FL++ A
Sbjct: 60 ---------VKQTLIDTSVIKAITTNALMDDQAEIKQTGNTPNTFVDGRNALFLLYTAIY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI I GVCETD+SGYPDCR I+++ +NL M+ + + TPLM+L K ETW
Sbjct: 111 AKSQGIQTIYTGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYNFNIRTPLMYLTKKETWA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LA +G + I +HTCYLG GC++CP+C LR+KG E+ E+ +
Sbjct: 171 LADQLGAF---DYIRTHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLEEKGN 218
>gi|218781986|ref|YP_002433304.1| exsB protein [Desulfatibacillum alkenivorans AK-01]
gi|254764330|sp|B8FMW6|QUEC_DESAA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218763370|gb|ACL05836.1| exsB protein [Desulfatibacillum alkenivorans AK-01]
Length = 233
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 29/244 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN I K A++L SGG DS+T ++ A D +V LSF YGQR+ ELE V K +
Sbjct: 1 MNAIQK--EKAVVLLSGGLDSATAMAIAKDMGFQVYALSFSYGQRHTTELEAAKRVAKTL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSL---TKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ + + + L G + ++ K A + + +P T+VP RN IFL
Sbjct: 59 GAVEHQVAN-------IDLTCFGGSALTADLDVPKGRAPEDMEKEIPVTYVPARNTIFLS 111
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH------VTVHTP 171
FA A L ++I IGV DYSGYPDCR + I+A NL ++ + +HTP
Sbjct: 112 FALAWAEVLETSHIFIGVNAVDYSGYPDCRPEYIQAFTAMANLATKAGVEGRTKIEIHTP 171
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ L K + + +G + +H+CY G C C +C LR+KG+
Sbjct: 172 LIDLTKAQIIQKGIALG------VDYGLTHSCYD-----PSPEGLACGQCDSCLLRKKGF 220
Query: 232 MEFK 235
E
Sbjct: 221 AEAG 224
>gi|254516699|ref|ZP_05128758.1| exsB protein [gamma proteobacterium NOR5-3]
gi|219675122|gb|EED31489.1| exsB protein [gamma proteobacterium NOR5-3]
Length = 232
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 30/244 (12%)
Query: 1 MNDI--IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
M++ + + A++L SGG DS+T L+ A ++ R +LSFDYGQR++ EL V K
Sbjct: 1 MSEPPSMNSSKKAVILVSGGLDSTTVLALAKEQGYRCYSLSFDYGQRHRAELFAAERVSK 60
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFL 116
+ ++ +H + L I S+LT + + +P T+VP RN +FL
Sbjct: 61 TLGDV----------EHKVVRLNLDSIGGSALTDDSIAVPEEASEGIPVTYVPARNTVFL 110
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTP 171
A A LG +I IGV DYSGYPDCR I A + N+ V +HTP
Sbjct: 111 SIALGWAEVLGAQDIFIGVNAVDYSGYPDCRPAFIDAFQQLANVATRVGVEGGSYQIHTP 170
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
LM L K E KL + ++ ++ +CY D G C C AC LR+ G+
Sbjct: 171 LMDLGKDEIVKLGARL------DVDYSQTVSCYQATDD-----GLACGVCDACRLRRDGF 219
Query: 232 MEFK 235
+
Sbjct: 220 VNAG 223
>gi|189039055|sp|A4VN94|QUEC_PSEU5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 224
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A D T+SFDYGQR++ EL+ V K++
Sbjct: 3 EKKAVILLSGGLDSATVVAMARDEGYACYTMSFDYGQRHRAELQAAERVAKQLA------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G I S+LT + +P T+VP RN +FL A A
Sbjct: 57 ---VVEHKVIGLNLNG-IGGSALTDTSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
LG +I IGV DYSGYPDCR + + A E NL ++ V + PL L K +
Sbjct: 113 LGARDIFIGVNAVDYSGYPDCRPEFVAAFERMANLATKAGVEGQGFRIQAPLQNLSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY D G C C +C LR G+ E
Sbjct: 173 VRKGSRLG------VDYAMTVSCYQADDD-----GRACGKCDSCRLRSAGFAEAG 216
>gi|39995591|ref|NP_951542.1| exsB protein [Geobacter sulfurreducens PCA]
gi|81703348|sp|Q74FW9|QUEC_GEOSL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|39982354|gb|AAR33815.1| exsB protein [Geobacter sulfurreducens PCA]
Length = 237
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L+SGG DS+TCL+ A +SF YGQR+ VELE + +
Sbjct: 1 MTRKAVVLYSGGLDSTTCLAIARAEGFEPHAMSFSYGQRHSVELELAKRNARPAGAV--- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
+H++ L + S+LT ++A+ + +++P T+VP RN IFL FA A
Sbjct: 58 -------EHMVVEFDLRKVGGSALTADIAVPKEGVGDDIPVTYVPARNTIFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKY 178
LG +I IGV DYSGYPDCR + I A ET NL +H PLM L K
Sbjct: 111 VLGAFDIFIGVNALDYSGYPDCRPEYISAFETMANLATRVGVEGTGRFRIHAPLMRLTKA 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + +G + +H+CY G C C +C LR KG+ E
Sbjct: 171 EIIRKGLALG------VDYGLTHSCYD-----PSPAGVACGLCDSCRLRLKGFAEVG 216
>gi|296132467|ref|YP_003639714.1| exsB protein [Thermincola sp. JR]
gi|296031045|gb|ADG81813.1| exsB protein [Thermincola potens JR]
Length = 225
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ C+S A + + +SF YGQR+ E+EC KK+ E
Sbjct: 2 EKAVVLLSGGLDSTVCMSVAQKQGYELYPISFLYGQRHSREIECA----KKVAEYYQV-- 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYR 125
+ H++ + I S+LT N+ + D N +P T+VP RN+IFL +A A
Sbjct: 56 ----KKHLIITTNMDSIGGSALTANIDVPEGDENRSEIPVTYVPARNLIFLSYALGYAEV 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKYE 179
+G I IGV DYSGYPDCR + I + + + + + PL+ L K E
Sbjct: 112 IGAEKIFIGVNAVDYSGYPDCRPEFIERFQQLADYSTKAATQDKREIKIEAPLLNLTKAE 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
KL LE + +CY G C C +C LR KG+ E K
Sbjct: 172 IVKLGV------ANKAPLELTTSCYRGGEK-------ACGRCDSCLLRLKGFKEAGLK 216
>gi|146283134|ref|YP_001173287.1| ExsB protein [Pseudomonas stutzeri A1501]
gi|145571339|gb|ABP80445.1| ExsB protein [Pseudomonas stutzeri A1501]
Length = 241
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A D T+SFDYGQR++ EL+ V K++
Sbjct: 20 EKKAVILLSGGLDSATVVAMARDEGYACYTMSFDYGQRHRAELQAAERVAKQLA------ 73
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G I S+LT + +P T+VP RN +FL A A
Sbjct: 74 ---VVEHKVIGLNLNG-IGGSALTDTSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEV 129
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
LG +I IGV DYSGYPDCR + + A E NL ++ V + PL L K +
Sbjct: 130 LGARDIFIGVNAVDYSGYPDCRPEFVAAFERMANLATKAGVEGQGFRIQAPLQNLSKAQI 189
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY D G C C +C LR G+ E
Sbjct: 190 VRKGSRLG------VDYAMTVSCYQADDD-----GRACGKCDSCRLRSAGFAEAG 233
>gi|304388253|ref|ZP_07370373.1| transcription regulator ExsB [Neisseria meningitidis ATCC 13091]
gi|304337780|gb|EFM03929.1| transcription regulator ExsB [Neisseria meningitidis ATCC 13091]
gi|325141743|gb|EGC64196.1| exsB protein [Neisseria meningitidis 961-5945]
gi|325197737|gb|ADY93193.1| exsB protein [Neisseria meningitidis G2136]
Length = 219
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 144/236 (61%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E++HTCY G GC CP+C LR++G E+ E +
Sbjct: 172 ADEMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLESKK 217
>gi|161869451|ref|YP_001598618.1| aluminum resistance protein, putative [Neisseria meningitidis
053442]
gi|189038928|sp|A9M1Y9|QUEC_NEIM0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|161595004|gb|ABX72664.1| aluminum resistance protein, putative [Neisseria meningitidis
053442]
Length = 220
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 144/236 (61%), Gaps = 22/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------IKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY G G GC CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGI------VGGGCRECPSCILRERGLAEYLESKK 218
>gi|288575467|ref|ZP_05977006.2| ExsB protein [Neisseria mucosa ATCC 25996]
gi|288567702|gb|EFC89262.1| ExsB protein [Neisseria mucosa ATCC 25996]
Length = 255
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 144/238 (60%), Gaps = 23/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 36 TMQHPQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG- 94
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ +L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA
Sbjct: 95 ---------VKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAI 145
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW
Sbjct: 146 YAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTW 205
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA +G ++ I E++HTCY G GC+ CP+C LR++G E+ E +
Sbjct: 206 ALADKMGA---LDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLESKR 253
>gi|251792043|ref|YP_003006763.1| ExsB protein [Aggregatibacter aphrophilus NJ8700]
gi|247533430|gb|ACS96676.1| ExsB protein [Aggregatibacter aphrophilus NJ8700]
Length = 223
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 135/238 (56%), Gaps = 23/238 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ + AL++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + + +
Sbjct: 1 MSNQPNKALVIFSGGQDSTTCLFLAIKEFGPENVEVITFQYGQRHVIELEKARWIAQDLK 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ +L +++ I+H++L N + +D+ LPNTFV GRN +FL++AA
Sbjct: 61 ----------VKQTLLDTSVIKAITHNALMDPNAQISQKDDELPNTFVDGRNALFLLYAA 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI I GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K +T
Sbjct: 111 IYAKSQGIRVIYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYPFDIRTPLMWLDKKDT 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
W LA +G + I + +HTCY G GC CP+C LR++G + +
Sbjct: 171 WALADQLGAF---DYIRQHTHTCYNGVEG-------GCGECPSCILRERGLNAYLQAR 218
>gi|218767647|ref|YP_002342159.1| hypothetical protein NMA0702 [Neisseria meningitidis Z2491]
gi|81543061|sp|Q9JVT8|QUEC_NEIMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|121051655|emb|CAM07958.1| hypothetical protein NMA0702 [Neisseria meningitidis Z2491]
gi|254674036|emb|CBA09820.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|319409903|emb|CBY90228.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
Length = 219
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 143/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY G GC CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLESKK 217
>gi|223041977|ref|ZP_03612161.1| queuosine biosynthesis protein QueC [Actinobacillus minor 202]
gi|223017234|gb|EEF15662.1| queuosine biosynthesis protein QueC [Actinobacillus minor 202]
Length = 221
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 140/238 (58%), Gaps = 22/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+++ A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + + +
Sbjct: 1 MQQPQKAIVIFSGGQDSTTCLFQAIAEFGKENVEVITFQYGQRHAIELEKAQWIAQDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ +++ I+ ++L A Q + PNTFV GRN +FL++AA
Sbjct: 60 ---------VKQTLVDTSLIKAITSNALMDEQAKIEQQGDKPNTFVDGRNALFLLYAAIY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A R GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K ETW+
Sbjct: 111 AKRQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKETWR 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LA +G + I + +HTCYLG GC++CP+C LR+KG E+ + +
Sbjct: 171 LADQLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLAERGE 218
>gi|153953061|ref|YP_001393826.1| transcriptional regulator [Clostridium kluyveri DSM 555]
gi|219853712|ref|YP_002470834.1| hypothetical protein CKR_0369 [Clostridium kluyveri NBRC 12016]
gi|189038909|sp|A5N597|QUEC_CLOK5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764326|sp|B9DYU5|QUEC_CLOK1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|146345942|gb|EDK32478.1| Predicted transcriptional regulator [Clostridium kluyveri DSM 555]
gi|219567436|dbj|BAH05420.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 226
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 121/242 (50%), Gaps = 35/242 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L A + V +SFDYGQR+K E++C V
Sbjct: 2 KKAVVLLSGGLDSTTVLYLAKSQGYEVYAMSFDYGQRHKKEIQCARDVA----------S 51
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ D +L + S+LT N + +P T+VP RN+IFL +AA+ A
Sbjct: 52 GTGAADFVLVTTNMNAWGGSALTDNSIKVPEFNEESEKIPVTYVPARNMIFLSYAASYAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKY 178
+G +I IGV E DYSGY DCRH+ I ++E INLG + ++ +H P ++ K
Sbjct: 112 TIGAYDIFIGVSEVDYSGYVDCRHEFIDSMEKTINLGTVCAVEHKKYIKIHAPFLYKTKS 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
E K+ D+G + E++ TCY G+ + C C +C LR + + E Y
Sbjct: 172 EEIKIGMDLG------VKYEKTWTCYNGEE-------FACGICDSCRLRLEAFKEAG--Y 216
Query: 239 QD 240
+D
Sbjct: 217 KD 218
>gi|149909159|ref|ZP_01897817.1| queuosine biosynthesis protein QueC [Moritella sp. PE36]
gi|149807910|gb|EDM67855.1| queuosine biosynthesis protein QueC [Moritella sp. PE36]
Length = 242
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 142/235 (60%), Gaps = 21/235 (8%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A A+L+FSGGQDS+TCL AL R+D V+ ++FDYGQR+ E+E V KK
Sbjct: 4 QTANKAVLVFSGGQDSTTCLVDALQRYDSVDCITFDYGQRHSQEIE----VAKKTAAYF- 58
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ I+ + +LG+++ SSLT++ V+ ++ +N LPN+FVPGRNI+F+ A+
Sbjct: 59 ----GVKNHKIINVDLLGELAISSLTRDDIAVSHELMENGLPNSFVPGRNILFMTLASIY 114
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
AY++G ++ GVCETD+SGYPDCR + I++I A NLGM TPLMWL K ETW
Sbjct: 115 AYQIGANTVITGVCETDFSGYPDCRDEFIKSINQACNLGMAKDFKFETPLMWLNKAETWA 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA D ++ + +S TCY G G GC CPAC LR G ++
Sbjct: 175 LAD---LHDELDFVTHQSLTCYNGI------VGKGCGDCPACLLRNNGLNDYLTN 220
>gi|145631240|ref|ZP_01787013.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021]
gi|144983167|gb|EDJ90662.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021]
Length = 223
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 141/234 (60%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKAFAIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G +++ + + +HTCY G GC CP+C LR KG ++ + +
Sbjct: 180 ELG---VLDYVQKHTHTCYEGIEG-------GCKKCPSCILRNKGLKKYLTQKR 223
>gi|121634320|ref|YP_974565.1| hypothetical protein NMC0464 [Neisseria meningitidis FAM18]
gi|167016439|sp|A1KSD4|QUEC_NEIMF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|120866026|emb|CAM09764.1| hypothetical protein NMC0464 [Neisseria meningitidis FAM18]
gi|254669985|emb|CBA04680.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
gi|308388708|gb|ADO31028.1| putative aluminum resistance protein [Neisseria meningitidis
alpha710]
gi|325127641|gb|EGC50557.1| exsB protein [Neisseria meningitidis N1568]
gi|325131675|gb|EGC54380.1| exsB protein [Neisseria meningitidis M6190]
gi|325137691|gb|EGC60268.1| exsB protein [Neisseria meningitidis ES14902]
Length = 219
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 144/236 (61%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E++HTCY G GC CP+C LR++G E+ E +
Sbjct: 172 ADEMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLESKK 217
>gi|331016449|gb|EGH96505.1| exsB protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 229
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGIALG------VDYALTVSCYQAD-----DQGRACGKCDSCRLRAEGF 217
>gi|213969195|ref|ZP_03397334.1| exsB protein [Pseudomonas syringae pv. tomato T1]
gi|301384810|ref|ZP_07233228.1| exsB protein [Pseudomonas syringae pv. tomato Max13]
gi|302130600|ref|ZP_07256590.1| exsB protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213926193|gb|EEB59749.1| exsB protein [Pseudomonas syringae pv. tomato T1]
Length = 229
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG------VDYALTVSCYQAD-----DQGRACGKCDSCRLRAEGF 217
>gi|189424272|ref|YP_001951449.1| exsB protein [Geobacter lovleyi SZ]
gi|189420531|gb|ACD94929.1| exsB protein [Geobacter lovleyi SZ]
Length = 223
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 29/237 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L+S G DS+TCL+ A D+ +SFDYGQR++ EL+ +K+ +
Sbjct: 2 RKAVILYSSGLDSTTCLAIARDQGFAPYAISFDYGQRHRHELDLARANARKLGAV----- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRL 126
+H++ L + S+LT + + + +++P T+VP RN IFL FA A L
Sbjct: 57 -----EHLVVAFDLRQVGGSALTSEIDVPKEGVADDIPVTYVPARNTIFLSFALGWAEVL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYET 180
G +I IGV DYSGYPDCR + I A + NL + H T+HTPL+ L K E
Sbjct: 112 GAYDIFIGVNALDYSGYPDCRPEYIDAYQRMANLATKAGVEGTGHFTIHTPLINLTKAEI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
K +G + ++H+CY D G C C +C LR KG+ E +
Sbjct: 172 IKQGTALG------VDYSQTHSCYDPTPD-----GLSCGQCDSCRLRLKGFSEAGLR 217
>gi|254166659|ref|ZP_04873513.1| exsB protein [Aciduliprofundum boonei T469]
gi|254167513|ref|ZP_04874365.1| exsB protein [Aciduliprofundum boonei T469]
gi|289596334|ref|YP_003483030.1| exsB protein [Aciduliprofundum boonei T469]
gi|197623776|gb|EDY36339.1| exsB protein [Aciduliprofundum boonei T469]
gi|197624269|gb|EDY36830.1| exsB protein [Aciduliprofundum boonei T469]
gi|289534121|gb|ADD08468.1| exsB protein [Aciduliprofundum boonei T469]
Length = 237
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 110/241 (45%), Gaps = 36/241 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L+ AL+ V LSFDYGQR+ ELE + +
Sbjct: 2 KAVVLLSGGLDSSTVLAIALEMGYDVHALSFDYGQRHSRELESAKKIARYF--------- 52
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATLAY 124
H + L I S+LT N+ + + + +P T+VP RN I L A A
Sbjct: 53 --NVPHKIIKIDLRQIGGSALTDNIEVPERQVEDIEKEIPITYVPARNTILLSLALGYAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-----HTPLMWLKKYE 179
+ I G DYSGYPDCR + + A E NLG + V P++ + K E
Sbjct: 111 VIDADAIFYGANAIDYSGYPDCRPEYVEAFERVANLGTKRGVEGKPIKIIAPIIHMTKAE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
K ++G + E + +CY G++ C C +C LR KG+ME Y+
Sbjct: 171 IIKKGMELG------VPYELTWSCYRGEKK-------ACGKCDSCLLRLKGFMEAG--YE 215
Query: 240 D 240
D
Sbjct: 216 D 216
>gi|118579716|ref|YP_900966.1| exsB protein [Pelobacter propionicus DSM 2379]
gi|171704444|sp|A1ANI8|QUEC_PELPD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118502426|gb|ABK98908.1| preQ(0) biosynthesis protein QueC [Pelobacter propionicus DSM 2379]
Length = 226
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 116/237 (48%), Gaps = 29/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L+SGG DS+TCL+ A +SF YGQR+ ELE + + +
Sbjct: 1 MEKRAVVLYSGGLDSTTCLAMAKADGFAPYAMSFSYGQRHGFELEVAKANARPLGAV--- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
+H++ L + S+LT ++++ + +++P T+VP RN IFL FA A
Sbjct: 58 -------EHLVVDFDLRRMGGSALTDDISVPKEGVGSDIPVTYVPARNTIFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKY 178
LG +I IGV DYSGYPDCR + + A E NL + H ++ TPL+ + K
Sbjct: 111 VLGAFDIYIGVNSLDYSGYPDCRPEFVSAFEALANLATKSGVEGQGHFSIRTPLINMTKA 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E K +G + +H+CY + D G C C +C LR KG+ E
Sbjct: 171 EIIKAGVALG------VDYSWTHSCYDPESD-----GTSCGRCDSCRLRLKGFAEAG 216
>gi|260914428|ref|ZP_05920897.1| transcription regulator ExsB [Pasteurella dagmatis ATCC 43325]
gi|260631529|gb|EEX49711.1| transcription regulator ExsB [Pasteurella dagmatis ATCC 43325]
Length = 224
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 87/231 (37%), Positives = 134/231 (58%), Gaps = 22/231 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + K +
Sbjct: 9 NRKAVVIFSGGQDSTTCLIQAIQEYGAENVEAVTFQYGQRHAIELEKAQWIAKDLG---- 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+ ++L A Q + PNTFV GRN +FL++AA A
Sbjct: 65 ------VKQILIDTSVIKAITQNALMDKNATIEQQGSTPNTFVDGRNALFLLYAAIYAKG 118
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GIT+I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K TW+LA
Sbjct: 119 QGITDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYSFNIKTPLMYLTKAHTWQLAD 178
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G ++ I + +HTCY+G GC CP+C LR+ G E+
Sbjct: 179 ELGA---LDYIRQHTHTCYMGVEK-------GCGECPSCILRENGLTEYLA 219
>gi|254804409|ref|YP_003082630.1| putative aluminum resistance protein [Neisseria meningitidis
alpha14]
gi|254667951|emb|CBA04189.1| putative aluminum resistance protein [Neisseria meningitidis
alpha14]
Length = 219
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 144/236 (61%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERASWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E++HTCY G GC CP+C LR++G E+ E +
Sbjct: 172 ADEMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLESKK 217
>gi|91224505|ref|ZP_01259767.1| exsB protein [Vibrio alginolyticus 12G01]
gi|91190847|gb|EAS77114.1| exsB protein [Vibrio alginolyticus 12G01]
Length = 218
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 143/231 (61%), Gaps = 21/231 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL AL+ +D V ++FDYGQR+ E++ + + K++
Sbjct: 5 KALVVFSGGQDSTTCLIDALNTYDEVHAITFDYGQRHSDEIDIAIELGKQL--------- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ +L + + +++ SSLT++ V+ + D N+PNTFVPGRNI+FL +A AY+L
Sbjct: 56 NIKSHKVLDVKSINELAISSLTRDNIPVSNDLSDANVPNTFVPGRNILFLTYACIHAYQL 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI +I+ GVCETD+SGYPDCR + IR++ + NLGM+ + TPLMWL K ETW LA
Sbjct: 116 GIQDIITGVCETDFSGYPDCRDNFIRSLNLSCNLGMDKAFNIKTPLMWLTKAETWALADK 175
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+++ + + TCY G G GC CPAC LRQ G E+
Sbjct: 176 H---NMLEFVQNNTLTCYNGI------VGKGCGECPACLLRQSGLEEYLAS 217
>gi|330950597|gb|EGH50857.1| ExsB [Pseudomonas syringae Cit 7]
Length = 229
Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYTCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG------VDYSLTVSCYQAD-----DQGRACGKCDSCRLRAEGF 217
>gi|66044667|ref|YP_234508.1| ExsB [Pseudomonas syringae pv. syringae B728a]
gi|302187147|ref|ZP_07263820.1| ExsB [Pseudomonas syringae pv. syringae 642]
gi|75502945|sp|Q4ZWK2|QUEC_PSEU2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|63255374|gb|AAY36470.1| ExsB [Pseudomonas syringae pv. syringae B728a]
gi|330968881|gb|EGH68947.1| ExsB [Pseudomonas syringae pv. aceris str. M302273PT]
gi|330975317|gb|EGH75383.1| ExsB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 229
Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG------VDYSLTVSCYQAD-----DQGRACGKCDSCRLRAEGF 217
>gi|240949104|ref|ZP_04753452.1| queuosine biosynthesis protein QueC [Actinobacillus minor NM305]
gi|240296499|gb|EER47131.1| queuosine biosynthesis protein QueC [Actinobacillus minor NM305]
Length = 221
Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats.
Identities = 87/238 (36%), Positives = 139/238 (58%), Gaps = 22/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+++ A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + + +
Sbjct: 1 MQQPQKAIVIFSGGQDSTTCLFQAIAEFGKENVEVITFQYGQRHAIELEKAQWIAQDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ +++ I+ ++L + A Q + PNTFV GRN +FL++AA
Sbjct: 60 ---------IKQTLIDTSLIKAITSNALMDDQAKIEQQGDKPNTFVDGRNALFLLYAAIY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+ K ETW+
Sbjct: 111 AKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYFTKKETWR 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LA +G + I + +HTCYLG GC++CP+C LR+KG E+ + +
Sbjct: 171 LADQLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLAERGE 218
>gi|327481487|gb|AEA84797.1| ExsB protein [Pseudomonas stutzeri DSM 4166]
Length = 224
Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A D T+SFDYGQR++ EL+ V K++
Sbjct: 3 EKKAVILLSGGLDSATVVAMARDEGYACYTMSFDYGQRHRAELQAAERVAKQLA------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G I S+LT + +P T+VP RN +FL A A
Sbjct: 57 ---VVEHKVIGLNLNG-IGGSALTDTSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
LG +I IGV DYSGYPDCR + + A E NL ++ V + PL L K +
Sbjct: 113 LGARDIFIGVNAVDYSGYPDCRPEFVAAFERMANLATKAGVEGQGFRIQAPLQNLSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY D G C C +C LR G+ E
Sbjct: 173 VREGSRLG------VDYAMTVSCYQADDD-----GRACGKCDSCRLRSAGFAEAG 216
>gi|330936707|gb|EGH40895.1| ExsB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 229
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG------VDYSLTVSCYQADNQ-----GRACGKCDSCRLRAEGF 217
>gi|284006427|emb|CBA71663.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 239
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 90/244 (36%), Positives = 136/244 (55%), Gaps = 23/244 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M D I A+++FSGGQDS+TCL A+ ++D V ++F+Y QR+ E+ + +
Sbjct: 1 MMDSIGMLKRAVIVFSGGQDSTTCLIQAIKQYDEVHCITFNYAQRHSTEIVVAQKICQHF 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKI----QDNNLPNTFVPGRNIIF 115
++ IL + +L +++ SSLT++ + + ++ LPNTFVPGRNI+F
Sbjct: 61 ---------NIKAHKILDVGLLNELAISSLTRDNIPIPSYEKSSESELPNTFVPGRNILF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
L AA AY++ ++ GVCETD+SGYPDCR + ++A+ AI LG+ + TPLMWL
Sbjct: 112 LTLAAIYAYQVQAEVVITGVCETDFSGYPDCRDEFVKALNQAICLGIAKAIRFETPLMWL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K ETW LA + + ++ TCY G G GC C AC+LR +G +
Sbjct: 172 NKAETWALADYYHSFEFIQ---NKTLTCYNGI------IGDGCQKCAACHLRAEGLKYYL 222
Query: 236 EKYQ 239
Q
Sbjct: 223 NHRQ 226
>gi|238764853|ref|ZP_04625794.1| Queuosine biosynthesis protein queC [Yersinia kristensenii ATCC
33638]
gi|238696960|gb|EEP89736.1| Queuosine biosynthesis protein queC [Yersinia kristensenii ATCC
33638]
Length = 232
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 90/234 (38%), Positives = 136/234 (58%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALQQYDEVHCMTFDYGQRHRAEIDVARDLAIQLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + ++LP+TFVPGRNI+FL AA A
Sbjct: 56 ---KAHKVLDVTMLNELAVSSLTRDSIPVPTYNEGDGDSLPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ AI+LG+ + TPLMWL K ETW L
Sbjct: 113 YQVQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A D V ++ TCY G + G GC+ C AC+LR KG +
Sbjct: 173 ADYYQQLDRVR---HDTLTCYNGIQ------GDGCDQCAACHLRAKGLEFYLAN 217
>gi|261393104|emb|CAX50701.1| conserved hypothetical protein [Neisseria meningitidis 8013]
gi|325133665|gb|EGC56322.1| exsB protein [Neisseria meningitidis M13399]
gi|325143847|gb|EGC66162.1| exsB protein [Neisseria meningitidis M01-240013]
gi|325206623|gb|ADZ02076.1| exsB protein [Neisseria meningitidis M04-240196]
Length = 219
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 143/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERASWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY G GC CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLESKK 217
>gi|304413821|ref|ZP_07395238.1| putative aluminum resistance protein [Candidatus Regiella
insecticola LSR1]
gi|304283541|gb|EFL91936.1| putative aluminum resistance protein [Candidatus Regiella
insecticola LSR1]
Length = 244
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 93/242 (38%), Positives = 139/242 (57%), Gaps = 20/242 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
SA+++FSGGQDS+TCL AL ++++V ++FDY QR++ E+E + K + +
Sbjct: 1 MQQSAVVVFSGGQDSTTCLIQALQQYEKVHCITFDYQQRHREEIEVAKKLVKTLN--TAR 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK---------NVAMKIQDNNLPNTFVPGRNIIFLV 117
+ + IL + +L +++ SSLT+ + +PNTFVPGRNI+FL
Sbjct: 59 TEKNSIVHKILDVTLLNELTISSLTQNHIPIPPYTDANKHTNKKAIPNTFVPGRNILFLT 118
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
AA AY++ T ++ GVCETD+SGYPDCR D ++++ AINLG++ + TPLMWL K
Sbjct: 119 LAAIYAYKINTTTVITGVCETDFSGYPDCRDDFVKSLNQAINLGIDRSIDFITPLMWLNK 178
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
E W LA + LI + TCY G G GC C AC+LR +G + ++
Sbjct: 179 AEIWALAD---HYQQLKLIRSSTLTCYQGN------IGDGCKQCAACHLRSQGLIYYQAN 229
Query: 238 YQ 239
Q
Sbjct: 230 KQ 231
>gi|330964834|gb|EGH65094.1| exsB protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 229
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG------VDYALTVSCYQAD-----DQGRACGKCDSCRLRAEGF 217
>gi|330872643|gb|EGH06792.1| exsB protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 229
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG------VDYALTVSCYQADDE-----GRACGRCDSCRLRAEGF 217
>gi|15676432|ref|NP_273570.1| putative aluminum resistance protein [Neisseria meningitidis MC58]
gi|81784948|sp|Q9K0Q9|QUEC_NEIMB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|7225750|gb|AAF40955.1| putative aluminum resistance protein [Neisseria meningitidis MC58]
gi|316985378|gb|EFV64326.1| queuosine biosynthesis protein queC [Neisseria meningitidis H44/76]
gi|325139740|gb|EGC62274.1| exsB protein [Neisseria meningitidis CU385]
gi|325200787|gb|ADY96242.1| exsB protein [Neisseria meningitidis H44/76]
Length = 219
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 144/236 (61%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E++HTCY G GC CP+C LR++G E+ E +
Sbjct: 172 ADEMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLESKK 217
>gi|48478380|ref|YP_024086.1| hypothetical protein PTO1308 [Picrophilus torridus DSM 9790]
gi|74567352|sp|Q6KZF9|QUEC_PICTO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|48431028|gb|AAT43893.1| hypothetical protein PTO1308 [Picrophilus torridus DSM 9790]
Length = 239
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 117/236 (49%), Gaps = 33/236 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L SGG DS T L++AL V LSFDYGQR+K ELE KKI +
Sbjct: 3 RAVCLLSGGLDSPTVLAYALSNGYEVFPLSFDYGQRHKKELES----SKKICDYYHLNLK 58
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAY 124
+ D L I HS+LT N+ + D N++P T+VP RN IFL AA A
Sbjct: 59 IIKID-------LRAIGHSALTDNIDVPENDLKSIGNDIPVTYVPARNTIFLSIAAAYAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYET 180
L I IG DYSGYPDCR + +E A++LG + + ++ PL +L K +
Sbjct: 112 TLNANEIFIGANAIDYSGYPDCRPEYFNKMEEALSLGTSIGLRNGIKINVPLQYLTKSDI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
KL + + + + + +CY G++ C C +C LR KG+ME +
Sbjct: 172 VKLGRKL------KVPYKLTWSCYNGRKK-------ACGKCDSCLLRLKGFMEAGD 214
>gi|325203616|gb|ADY99069.1| exsB protein [Neisseria meningitidis M01-240355]
Length = 219
Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 143/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY G GC CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAEYLESKK 217
>gi|307823681|ref|ZP_07653909.1| exsB protein [Methylobacter tundripaludum SV96]
gi|307734975|gb|EFO05824.1| exsB protein [Methylobacter tundripaludum SV96]
Length = 225
Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS T L+ A + + LSFDYGQR+ EL +
Sbjct: 1 MQKKAIVLLSGGLDSITVLALAKKQGFKCYALSFDYGQRHNAELVAAAQIA--------- 51
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
D EDH + L I S+LT + +P T+VP RN IFL FA A
Sbjct: 52 -ADYQVEDHKIIKLGLSSIGGSALTDEHIAVPHSPQDGIPVTYVPARNTIFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYE 179
L +++I IGV DYSGYPDCR + I+A + NL ++ H +HTPL+ L K E
Sbjct: 111 VLKLSDIFIGVNAVDYSGYPDCRPEFIKAFQQLANLATKAGVEGEHFVIHTPLIALSKAE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
K ++G + + + +CY G C C AC LR+ G+ E K
Sbjct: 171 IIKQGVELG------VDYQRTVSCYSADEQ-----GRACQVCDACRLRKIGFTEAGIK 217
>gi|260581108|ref|ZP_05848929.1| queuosine biosynthesis protein queC [Haemophilus influenzae RdAW]
gi|5853051|gb|AAD54291.1| HI1191 [Haemophilus influenzae]
gi|260092237|gb|EEW76179.1| queuosine biosynthesis protein queC [Haemophilus influenzae RdAW]
Length = 227
Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats.
Identities = 85/232 (36%), Positives = 140/232 (60%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLAD 179
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 ELG---VLDYVQKHTHTCYEGIEG-------GCRKCPSCILRNKGLKKYLTQ 221
>gi|119511109|ref|ZP_01630227.1| hypothetical protein N9414_16856 [Nodularia spumigena CCY9414]
gi|119464204|gb|EAW45123.1| hypothetical protein N9414_16856 [Nodularia spumigena CCY9414]
Length = 234
Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats.
Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 29/242 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
++ A++L SGG DSST L A +SFDY QR++ EL V + + +
Sbjct: 6 VETEMKAVILLSGGLDSSTVLYQAKADGYECHPISFDYQQRHRRELHSAFLVAQTLGVVK 65
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK----IQDNNLPNTFVPGRNIIFLVFAA 120
+ + L + G + + T N+ + N+P T+VP RN IFL FA
Sbjct: 66 HQVVN-------FDLRLWGGSALTDETINLPQERSLDEMSQNIPVTYVPARNTIFLSFAL 118
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
A + + IGV DYSGYPDCR D I+A++ LG + + + + PL+ L
Sbjct: 119 GYAEAIAAQRVYIGVNALDYSGYPDCRPDYIQAMQKVFQLGTKQGREGNPIKIVAPLIDL 178
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
KK E +L +G + E + +CY G C C +C LR + E
Sbjct: 179 KKTEIIQLGNQLG------VPWELTWSCYAGSD-------VACGVCDSCRLRLAAFAELG 225
Query: 236 EK 237
K
Sbjct: 226 LK 227
>gi|296315121|ref|ZP_06865062.1| ExsB protein [Neisseria polysaccharea ATCC 43768]
gi|296838036|gb|EFH21974.1| ExsB protein [Neisseria polysaccharea ATCC 43768]
Length = 219
Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 143/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHDVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L A ++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDEAAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY G GC+ CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLESKK 217
>gi|289674881|ref|ZP_06495771.1| ExsB [Pseudomonas syringae pv. syringae FF5]
Length = 229
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGTALG------VDYSLTVSCYQADDH-----GRACGKCDSCRLRAEGF 217
>gi|261378241|ref|ZP_05982814.1| ExsB protein [Neisseria cinerea ATCC 14685]
gi|269145319|gb|EEZ71737.1| ExsB protein [Neisseria cinerea ATCC 14685]
Length = 219
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 144/236 (61%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQQALVIFSGGQDSTTCLIQAIQTYRRENVQAITFQYGQRHVVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L A ++ DN +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDEAAAIETADNGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E++HTCY G GC+ CP+C LR++G E+ E +
Sbjct: 172 ADEMG---VLDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLESKK 217
>gi|330896139|gb|EGH28360.1| ExsB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 229
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ K A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +
Sbjct: 1 MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGAALG------VDYSLTVSCYQAD-----DQGRACGKCDSCRLRAEGF 217
>gi|88800188|ref|ZP_01115756.1| exsB protein [Reinekea sp. MED297]
gi|88777034|gb|EAR08241.1| exsB protein [Reinekea sp. MED297]
Length = 227
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 80/239 (33%), Positives = 113/239 (47%), Gaps = 28/239 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A++L SGG DS+T L+ A V LSFDYGQR+ EL+ +
Sbjct: 1 MSENKSKAVVLLSGGLDSTTVLAKAKADGCEVYALSFDYGQRHDSELDAARKIAA----- 55
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ E I+P+ L I S+LT + + + +P T+VP RN +FL A
Sbjct: 56 ----NAQVAEHKIVPM-NLRSIGGSALTDDAIDVPEQESEGIPATYVPARNTVFLSIALG 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLK 176
A + I IGV DYSGYPDCR + I A ET NL + V + TPL+ L
Sbjct: 111 WAEVIDADAIYIGVSAVDYSGYPDCRPEYIEAYETLANLATKRGVEGRRVEIRTPLINLT 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K +T KL Q +G + E+ +CY G C C +C LR+KG+ +
Sbjct: 171 KADTVKLGQSLG------VDYAETVSCYQA-----NANGEACGVCDSCRLRKKGFADAG 218
>gi|257487000|ref|ZP_05641041.1| exsB protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289626506|ref|ZP_06459460.1| exsB protein [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289650952|ref|ZP_06482295.1| exsB protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|298488199|ref|ZP_07006235.1| Queuosine Biosynthesis QueC ATPase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157257|gb|EFH98341.1| Queuosine Biosynthesis QueC ATPase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320323042|gb|EFW79131.1| exsB protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320329686|gb|EFW85675.1| exsB protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330868622|gb|EGH03331.1| exsB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330892250|gb|EGH24911.1| exsB protein [Pseudomonas syringae pv. mori str. 301020]
gi|330988979|gb|EGH87082.1| exsB protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331009358|gb|EGH89414.1| exsB protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 229
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPITYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGAALG------VDYSLTVSCYQAD-----DQGRACGKCDSCRLRAEGF 217
>gi|298370142|ref|ZP_06981458.1| ExsB protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281602|gb|EFI23091.1| ExsB protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 219
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 144/236 (61%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 QNRQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY G GC+ CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLESKK 217
>gi|187251576|ref|YP_001876058.1| exsB protein [Elusimicrobium minutum Pei191]
gi|186971736|gb|ACC98721.1| ExsB protein [Elusimicrobium minutum Pei191]
Length = 484
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 20/241 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + A++LFSGG DS+ CL WAL LS YGQ++ E+E + K+
Sbjct: 261 VEENKTSKKKAVVLFSGGLDSTVCLYWALKEGYECYALSVAYGQKHLKEIEVAQRLAKQA 320
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ +L LA + + M+ ++P+T+VP RN+IF+ A
Sbjct: 321 GVTHKHIEINLPW-----LAEATSLVGGAEIPATPMEQIGKSIPSTYVPARNLIFVSLGA 375
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
+ A +G +V+G DYSGYPDC + + A+ +G + TP++ L K
Sbjct: 376 SWADSIGAEAVVLGPNAVDYSGYPDCTPQFYKPLSEAVRVGTRLGKKFEILTPIIKLNKA 435
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
E KL + +G LE++ TCY G C C +C LR+KG+ + E+
Sbjct: 436 EIVKLGRKLGA------PLEQTWTCYNGGEKP-------CGVCESCKLRRKGFEDAGERE 482
Query: 239 Q 239
+
Sbjct: 483 E 483
>gi|302392166|ref|YP_003827986.1| preQ(0) biosynthesis protein QueC [Acetohalobium arabaticum DSM
5501]
gi|302204243|gb|ADL12921.1| preQ(0) biosynthesis protein QueC [Acetohalobium arabaticum DSM
5501]
Length = 223
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 114/237 (48%), Gaps = 33/237 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+T L A + +V LSF YGQ + ELE + ++
Sbjct: 2 KKAVVLFSGGLDSTTALYLAKSKGYQVYALSFKYGQSHSRELEAAKRIADQVG------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+H++ L S+LT + + +P T+VP RN+IFL +AA+ A
Sbjct: 55 ---VAEHVVVETSLSAWGGSALTDQEMDIPQGEKEREEIPTTYVPARNMIFLSYAASYAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKY 178
+G +I IGV E DYSGY DCR + I A+E AIN G ++ + + P + L K
Sbjct: 112 AVGAHDIFIGVSEVDYSGYVDCRQEFIDAMEEAINQGTVCGAEEDNPIKIQAPFINLTKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E +L ++G + + +CY G+ C +C +C LR K + E
Sbjct: 172 EEIELGMELG------VDYSLTWSCYRGEE-------LACGNCDSCMLRLKAFEEAG 215
>gi|332880678|ref|ZP_08448351.1| protein ExsB [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681312|gb|EGJ54236.1| protein ExsB [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 231
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 88/239 (36%), Positives = 136/239 (56%), Gaps = 22/239 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E + +
Sbjct: 1 MTMNKETALVVFSGGQDSTTCLFWAKKHFKKVVALSFVYGQKHVKEVELAKAIASR---A 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
W + ++ +G + +SLT + + + + PNTFVPGRN+ F+ AA
Sbjct: 58 DVDWDC-------MDVSFVGSLGRNSLTDATMQMDEEKPEGHCPNTFVPGRNLFFISIAA 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A GI +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K +T
Sbjct: 111 VYARERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKCQT 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
W LA ++G +++L+ ++ TCY G + G GC CPAC LR +G ++ + +
Sbjct: 171 WALADELG---VLDLVRHDTLTCYNGVQ------GDGCGHCPACKLRNEGLHKYLAEKE 220
>gi|308185915|ref|YP_003930046.1| Queuosine biosynthesis protein queC 2 [Pantoea vagans C9-1]
gi|308056425|gb|ADO08597.1| Queuosine biosynthesis protein queC 2 [Pantoea vagans C9-1]
Length = 231
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 134/230 (58%), Gaps = 22/230 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL A+ +D V ++FDYGQR++ E+E + +
Sbjct: 2 KRAVVVFSGGQDSTTCLIQAVQLYDEVHCVTFDYGQRHREEIEVARDLAMIL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ +L + +L +++ SSLT++ A + + LP TFVPGRNI+FL A+ AY
Sbjct: 54 -GVRAHKVLDVTMLNELAVSSLTRDNIPVPAYNPEASGLPTTFVPGRNILFLTLASVYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ ++ GVCETD+SGYPDCR + ++A+ A++LGM V TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAREVRFETPLMWLNKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ L+ E++ TCY G + G GC C AC+LR G +
Sbjct: 173 D---YWQQLALVREQTLTCYNGVK------GDGCGECAACHLRANGLQGY 213
>gi|149194505|ref|ZP_01871601.1| ExsB [Caminibacter mediatlanticus TB-2]
gi|149135249|gb|EDM23729.1| ExsB [Caminibacter mediatlanticus TB-2]
Length = 221
Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 110/234 (47%), Gaps = 26/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++ SGG DS+T A + L F+YGQR + L I + +
Sbjct: 2 KKAVVILSGGMDSTTATFIAKKEGYEIIPLHFNYGQRTEK---RELKAFNDICDYL---- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L +++ + I S+L V +P T+VP RN IFL A +A +
Sbjct: 55 -ELKNRYVIDIPFFKQIGASALVDENIEVPTDGIKPGIPITYVPFRNGIFLSIATAVAEK 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKL 183
G I IGV E D SGYPDCR + I++IE AIN G + + + + TPL+ LKK + K
Sbjct: 114 EGAEAIYIGVVEEDSSGYPDCREEFIKSIEDAINKGTKPQTQIKIKTPLIHLKKEDIVKK 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A ++G + LE + +CY + C C +C LR KG+ + K
Sbjct: 174 AVEVG------VPLELTWSCYKEEDK-------ACGVCDSCRLRLKGFKKAGIK 214
>gi|330996187|ref|ZP_08320077.1| protein ExsB [Paraprevotella xylaniphila YIT 11841]
gi|329573691|gb|EGG55282.1| protein ExsB [Paraprevotella xylaniphila YIT 11841]
Length = 231
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 136/239 (56%), Gaps = 22/239 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +AL++FSGGQDS+TCL WA F +V LSF YGQ++ E+E + +
Sbjct: 1 MTMNKETALVVFSGGQDSTTCLFWAKKHFKKVVALSFVYGQKHVKEVELAKAIASRAGV- 59
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
W + ++ +G + +SLT + + + + PNTFVPGRN+ F+ AA
Sbjct: 60 --DWDC-------MDVSFVGSLGRNSLTDSTMQMDEEKPEGSCPNTFVPGRNLFFISIAA 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A G+ +IV GV +TD+SGYPDCR I+++ +NL M+ +HTPLMW+ K +T
Sbjct: 111 VYARERGVNHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKCQT 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
W LA ++G +++L+ ++ TCY G + G GC CPAC LR +G ++ + +
Sbjct: 171 WALADELG---VLDLVRHDTLTCYNGVQ------GDGCGHCPACKLRNEGLHKYLAEKE 220
>gi|70732079|ref|YP_261835.1| exsB protein [Pseudomonas fluorescens Pf-5]
gi|110816202|sp|Q4K7E8|QUEC1_PSEF5 RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|68346378|gb|AAY93984.1| exsB protein [Pseudomonas fluorescens Pf-5]
Length = 233
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 72/241 (29%), Positives = 108/241 (44%), Gaps = 28/241 (11%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ A++L SGG DS+T ++ A R T+SFDYGQR++ EL V + +
Sbjct: 6 QNPSSSEKRAVILLSGGLDSATVVAMARAEGYRCYTMSFDYGQRHRAELHAAERVARDL- 64
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM--KIQDNNLPNTFVPGRNIIFLVFA 119
+ E ++ L + G I S+LT + + +P T+VP RN +FL A
Sbjct: 65 --------GVVEHKVIGLNLNG-IGGSALTDSTIEVPEAPGEGIPVTYVPARNTVFLSLA 115
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMW 174
A L +I IGV DYSGYPDCR + + A E NL ++ V + PL
Sbjct: 116 LGWAEVLHARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQN 175
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L K E + +G + + +CY G+ C C +C LR +G+
Sbjct: 176 LSKAEIIQAGVRLG------VDYGLTVSCYQADDS-----GHACGKCDSCRLRAEGFKAA 224
Query: 235 K 235
Sbjct: 225 G 225
>gi|85058654|ref|YP_454356.1| queuosine biosynthesis protein QueC [Sodalis glossinidius str.
'morsitans']
gi|110816262|sp|Q2NV74|QUEC_SODGM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|84779174|dbj|BAE73951.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 231
Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 135/235 (57%), Gaps = 22/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR++ E++ + ++
Sbjct: 2 KRAVVVFSGGQDSTTCLIQALSQYDEVHCVTFDYGQRHRAEIDVARKLAMQLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ +L ++ SSLT++ + LP+TFVPGRNI+FL AA AY
Sbjct: 58 -----HKVIDAGLLNALAVSSLTRDNITFPGYEDSAGGLPSTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++ + ++ GVCETD+SGYPDCR + I+A+ A+NLGM ++ TPLMWL K ETW LA
Sbjct: 113 QVEASAVITGVCETDFSGYPDCRDNFIKALNAAVNLGMARELSFVTPLMWLDKAETWALA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
D V ++ TCY G + G GC C AC+LR G ++ + Q
Sbjct: 173 DYYHQLDRVR---HDTLTCYNGIK------GDGCGQCAACHLRTHGLAAYRAQPQ 218
>gi|32035296|ref|ZP_00135303.1| COG0603: Predicted PP-loop superfamily ATPase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|303250158|ref|ZP_07336360.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307246013|ref|ZP_07528095.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307259430|ref|ZP_07541155.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|302651221|gb|EFL81375.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306852948|gb|EFM85171.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306866366|gb|EFM98229.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 222
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 138/235 (58%), Gaps = 23/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + K +
Sbjct: 1 MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ +++ I+ +++ + +K Q+ N PNTFV GRN +FL++ A
Sbjct: 60 ---------VKQTLIDTSVIKAITSNAMMEEREIK-QEGNTPNTFVDGRNALFLLYTAIY 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K +TW
Sbjct: 110 AKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA +G + I + +HTCYLG GC++CP+C LR+KG E+ +
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEYLSE 214
>gi|186684589|ref|YP_001867785.1| exsB protein [Nostoc punctiforme PCC 73102]
gi|254764363|sp|B2IUR7|QUEC_NOSP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|186467041|gb|ACC82842.1| exsB protein [Nostoc punctiforme PCC 73102]
Length = 224
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 75/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A +SFDY QR++ EL+ L V KK
Sbjct: 2 KAVILLSGGLDSSTILYKAKADGCECHAISFDYQQRHRQELQSALTVAKKAA-------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + ++ L S+LT + ++ N+P T+VP RN IFL FA
Sbjct: 54 -IAKHQVVNFD-LRQWGGSALTDDAIDLPQQRSLDEMSQNIPVTYVPARNTIFLSFALGY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKK 177
A + + IGV DYSGYPDCR D I A++ LG + + + PL+ LKK
Sbjct: 112 AEAIAAERVYIGVNALDYSGYPDCRPDYIEAMQEVFRLGTKQGREGQPIKIVAPLINLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E +L ++G + E + +CY G C C +C LR + E
Sbjct: 172 TEIIQLGNELG------VPWELTWSCYAGND-------VACGVCDSCRLRLAAFAELG 216
>gi|325129660|gb|EGC52475.1| exsB protein [Neisseria meningitidis OX99.30304]
gi|325135885|gb|EGC58497.1| exsB protein [Neisseria meningitidis M0579]
gi|325202686|gb|ADY98140.1| exsB protein [Neisseria meningitidis M01-240149]
gi|325207568|gb|ADZ03020.1| exsB protein [Neisseria meningitidis NZ-05/33]
Length = 219
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 142/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ N +PNTFV GRN +FL++AA A
Sbjct: 59 -------IKQTVLDLSLMRQITHNALMDDTAAIETAGNGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY G GC CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLESKK 217
>gi|71735695|ref|YP_275903.1| exsB protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|110816243|sp|Q48FD4|QUEC_PSE14 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|71556248|gb|AAZ35459.1| exsB protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 229
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPITYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 NLSKSDIVKAGAALG------VDYSLTVSCYQAD-----DQGRACGKCDSCRLRTEGF 217
>gi|333030899|ref|ZP_08458960.1| exsB protein [Bacteroides coprosuis DSM 18011]
gi|332741496|gb|EGJ71978.1| exsB protein [Bacteroides coprosuis DSM 18011]
Length = 217
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 133/233 (57%), Gaps = 19/233 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++LFSGGQDS+TCL WA RFD+V +SFDYGQ++ E++ + ++
Sbjct: 2 RNSKAIVLFSGGQDSTTCLYWAKKRFDKVYAISFDYGQKHSNEVDVARSIAQQ------- 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E +L + +S ++LT ++NN PNTFVPGRN+ FL AA A+
Sbjct: 55 ---ANVEFIVLDAHYISQLSINALTDTSLEMDENNNCPNTFVPGRNLFFLSMAAVFAFEH 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ +IV GV +TD+SGYPDCRH+ I++ +NL M+ +H PLMWL K W+L+
Sbjct: 112 DVQHIVTGVSQTDFSGYPDCRHNFIQSANLTLNLAMDKEFILHAPLMWLDKAGVWELSDK 171
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G DLV + + TCY G GC CPAC LR +G E+ K +
Sbjct: 172 LGVFDLVK---DHTLTCYNGV------IAEGCGHCPACKLRNQGLQEYLLKRE 215
>gi|332288621|ref|YP_004419473.1| queuosine biosynthesis protein QueC [Gallibacterium anatis UMN179]
gi|330431517|gb|AEC16576.1| queuosine biosynthesis protein QueC [Gallibacterium anatis UMN179]
Length = 224
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 139/236 (58%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A+++FSGGQDS+TCL AL + VE ++F YGQR+ +EL+ + +
Sbjct: 2 QNKKAIVIFSGGQDSTTCLLQALQTYGNGNVEAITFHYGQRHSIELDKSRWIANDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ IL L+++ I+H++L N ++ + LPNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTILDLSLMQSITHNALMDNNETIQQKQGELPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI++I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW L
Sbjct: 112 KGQGISDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYSFNIITPLMWLTKKETWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A +G + +++ +HTCY G GC+ CP+C LR+KG E+ + +
Sbjct: 172 ADQLG---RLEYVMQHTHTCYEGVEG-------GCHHCPSCLLREKGLNEYLAEKE 217
>gi|319639271|ref|ZP_07994022.1| queuosine biosynthesis protein queC [Neisseria mucosa C102]
gi|317399455|gb|EFV80125.1| queuosine biosynthesis protein queC [Neisseria mucosa C102]
Length = 219
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 144/236 (61%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ +ELE + + +
Sbjct: 2 EKQQALVIFSGGQDSTTCLIQAIQTYGLENVQAITFQYGQRHAIELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E +HTCY G GC+ CP+C LR++G E+ E +
Sbjct: 172 ADEMG---VLDYIREHTHTCYNGVVG-------GCHECPSCILRERGLSEYLESKK 217
>gi|325578616|ref|ZP_08148716.1| transcription regulator ExsB [Haemophilus parainfluenzae ATCC
33392]
gi|325159852|gb|EGC71982.1| transcription regulator ExsB [Haemophilus parainfluenzae ATCC
33392]
Length = 225
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 138/232 (59%), Gaps = 23/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
AL++FSGGQDS+TCL A+ + + VET++F YGQR+ +ELE + K +
Sbjct: 9 NRKALVIFSGGQDSTTCLIQAIAEYGVENVETVTFQYGQRHSIELEKARWIAKDLG---- 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ +++ I+H++L N ++ +D LPNTFV GRN +FL++AA A
Sbjct: 65 ------VKQTLIDTSVIKSITHNALMDANADIEQKDGELPNTFVDGRNALFLLYAAIYAK 118
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW LA
Sbjct: 119 GQGINDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPFNLKTPLMYLTKAQTWALA 178
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
++G ++ I + +HTCY G GC CP+C LR KG +E+
Sbjct: 179 DELG---TLDYIRQHTHTCYEGVEG-------GCRECPSCKLRDKGLLEYLA 220
>gi|282898083|ref|ZP_06306078.1| ExsB [Raphidiopsis brookii D9]
gi|281197227|gb|EFA72128.1| ExsB [Raphidiopsis brookii D9]
Length = 282
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 72/242 (29%), Positives = 106/242 (43%), Gaps = 35/242 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A++L SGG DSST L A +SFDY QR++ EL+ + + + + +
Sbjct: 54 KSIMKAVILLSGGLDSSTVLYQARADGYECYVISFDYHQRHRRELQSAISIAQSLEVV-- 111
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVF 118
+H L L S+LT N + ++P T+VP RN IFL F
Sbjct: 112 --------EHQLVTFDLRSWGGSALTDNSIPVPQNRPLDQMSGSIPITYVPARNTIFLSF 163
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLM 173
A A + + IGV DYSGYPDCR D I A++ LG + + + PL+
Sbjct: 164 ALAYAEAIRAERVYIGVNALDYSGYPDCRPDYIHAMQEVFRLGTKQGREGKRIDIVAPLI 223
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K + +L +G + E + +CY G + C C +C LR + E
Sbjct: 224 NLTKSQIIQLGNLLG------VPWELTWSCYSGDQQP-------CGVCDSCQLRWAAFHE 270
Query: 234 FK 235
Sbjct: 271 LG 272
>gi|165976518|ref|YP_001652111.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303253331|ref|ZP_07339480.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|189038889|sp|B0BQ32|QUEC_ACTPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|165876619|gb|ABY69667.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302648013|gb|EFL78220.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
Length = 222
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 137/235 (58%), Gaps = 23/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P A+++FSGGQDS+TCL A+ F VE ++F YGQR+ +ELE + K +
Sbjct: 1 MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVKNVEVVTFQYGQRHAIELEKAAWIAKDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ +++ I+ +++ + +K Q+ N PNTFV GRN +FL++ A
Sbjct: 60 ---------VKQTLIDTSVIKAITSNAMMEEREIK-QEGNTPNTFVDGRNALFLLYTAIY 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K +TW
Sbjct: 110 AKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA +G + I + +HTCYLG GC++CP+C LR+KG E+ +
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEYLSE 214
>gi|119487253|ref|ZP_01621004.1| hypothetical protein L8106_21052 [Lyngbya sp. PCC 8106]
gi|119455808|gb|EAW36943.1| hypothetical protein L8106_21052 [Lyngbya sp. PCC 8106]
Length = 229
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 106/238 (44%), Gaps = 35/238 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A +SFDY QR++ EL + + +
Sbjct: 2 KAVILLSGGLDSSTVLYQAKAEGYECYAISFDYQQRHQRELASAQQIAQSAGVV------ 55
Query: 70 SLGEDHILPLAILGDISHSSLTK-------NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+H + L S+LT + ++ N+P T+VP RN IFL FA
Sbjct: 56 ----EHQVVKFDLSLWGGSALTDRKIDLPNDRSLNQMSENIPITYVPARNTIFLSFALGY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
A + + + IGV DYSGYPDCR D I A++ LG + +H+PL+ LKK
Sbjct: 112 AETVNASRVYIGVNALDYSGYPDCRPDYIAAMQDVFRLGTKQGREGNPILIHSPLIHLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E +L + + E++ +CY G+ C C +C LR + E
Sbjct: 172 TEIIQLGNRL------RVPWEKTWSCYAGEEKS-------CGVCDSCKLRLAAFKELG 216
>gi|261380021|ref|ZP_05984594.1| ExsB protein [Neisseria subflava NJ9703]
gi|284797228|gb|EFC52575.1| ExsB protein [Neisseria subflava NJ9703]
Length = 219
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 145/236 (61%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ +ELE + + +
Sbjct: 2 EKQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAIELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + V+++ + LPNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMQQITHNALMDDTVSIETASDGLPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E +HTCY G GC+ CP+C LR++G E+ + +
Sbjct: 172 ADEMG---VLDYIREHTHTCYNGVVG-------GCHECPSCILRERGLSEYLKSKK 217
>gi|190150422|ref|YP_001968947.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307263765|ref|ZP_07545371.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|254764292|sp|B3H1X8|QUEC_ACTP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189915553|gb|ACE61805.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306870886|gb|EFN02624.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 222
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 138/235 (58%), Gaps = 23/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + K +
Sbjct: 1 MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ +++ I+ +++ + +K Q+ N PNTFV GRN +FL++ A
Sbjct: 60 ---------VKQTLIDTSVIKAITSNAMMEEREIK-QEGNTPNTFVDGRNALFLLYTAIY 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K +TW
Sbjct: 110 AKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA +G + I + +HTCYLG GC++CP+C LR+KG E+ +
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEYLSE 214
>gi|332884798|gb|EGK05054.1| 7-cyano-7-deazaguanine synthase [Dysgonomonas mossii DSM 22836]
Length = 218
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 136/234 (58%), Gaps = 21/234 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K SAL+LFSGGQDS+TCL WAL+ F V TL F YGQR+ E+E + +K
Sbjct: 1 MNKKESALVLFSGGQDSTTCLYWALENFSSVRTLCFTYGQRHSKEVEVAKSIAEKANVPF 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+L +I+ +S +SLT ++ + ++ PNTFVPGRN++FL FAA +
Sbjct: 61 Q----------LLDASIISQLSVNSLTSDIVMDQEKPADSYPNTFVPGRNLLFLTFAAVI 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI +IV GV E DYSGYPDCR I + +INL M+ H +HTPLMW K W+
Sbjct: 111 ARSHGIRHIVTGVSEADYSGYPDCRDTFILSANASINLAMDEHFQIHTPLMWRDKTAVWQ 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA ++G + ++I ++ TCY G GC CP+C LR++G + +
Sbjct: 171 LADELG---VFDIIRTQTLTCYNGI------IADGCGHCPSCKLRKQGLNNYLK 215
>gi|83593292|ref|YP_427044.1| ExsB [Rhodospirillum rubrum ATCC 11170]
gi|110816255|sp|Q2RSY8|QUEC_RHORT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|83576206|gb|ABC22757.1| ExsB [Rhodospirillum rubrum ATCC 11170]
Length = 241
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 112/238 (47%), Gaps = 33/238 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T L+ A V LSF YGQR+ VELE V +
Sbjct: 7 QRRAIVLVSGGLDSTTTLAIAQAEGFTVNALSFSYGQRHAVELEAARRVTQAFA------ 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAAT 121
E H++ L S+LT ++ + Q + +P T+VP RN +FL FA
Sbjct: 61 ----VERHVIATIDLRQFGGSALTDSIGVPKQRSLETMGAGIPVTYVPARNTVFLSFALA 116
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWL 175
A L ++ IGV DYSGYPDCR + I A +T NL + V +HTPL+ L
Sbjct: 117 WAEVLEANDVFIGVNALDYSGYPDCRPEYISAFQTMANLATKRGVEGTGVLTIHTPLIAL 176
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + + D+G + +H+CY G C +C +C LR KG+ E
Sbjct: 177 TKGQIIRRGLDLG------VDYALTHSCYD-----PSAEGEACGTCDSCLLRLKGFAE 223
>gi|126208569|ref|YP_001053794.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae L20]
gi|189038888|sp|A3N1A3|QUEC_ACTP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|126097361|gb|ABN74189.1| queuosine biosynthesis protein QueC [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 222
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 138/235 (58%), Gaps = 23/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + K +
Sbjct: 1 MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ +++ I+ +++ + +K Q+ N PNTFV GRN +FL++ A
Sbjct: 60 ---------VKQTLIDTSVIKAITSNAMMEEHEIK-QEGNTPNTFVDGRNALFLLYTAIY 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K +TW
Sbjct: 110 AKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA +G + I + +HTCYLG GC++CP+C LR+KG E+ +
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEYLSE 214
>gi|167856371|ref|ZP_02479098.1| queuosine biosynthesis protein QueC [Haemophilus parasuis 29755]
gi|167852509|gb|EDS23796.1| queuosine biosynthesis protein QueC [Haemophilus parasuis 29755]
Length = 219
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 90/238 (37%), Positives = 136/238 (57%), Gaps = 22/238 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K P A ++FSGGQDS+TCL A+ F + VE ++F YGQR+ +EL+ + + +
Sbjct: 1 MKPTPKAAVIFSGGQDSTTCLFLAIKEFGKENVEAVTFQYGQRHAIELDKARWIAQDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ +++ I+ ++L + A Q N PNTFV GRN +FL++ A
Sbjct: 60 ---------VKQTLIDTSVIKAITANALMDDQAEIKQTGNTPNTFVDGRNALFLLYTAIY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI I GVCETD+S YPDCR I+++ +NL M+ + + TPLM+L K ETW
Sbjct: 111 AKSQGIQTIYTGVCETDFSSYPDCRDVFIKSMNVTLNLAMDYNFNIRTPLMYLTKKETWA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
LA +G + I +HTCYLG GC++CP+C LR+KG E+ E+ +
Sbjct: 171 LADQLGAF---DYIRTHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLEEKSN 218
>gi|255065046|ref|ZP_05316901.1| ExsB protein [Neisseria sicca ATCC 29256]
gi|255050467|gb|EET45931.1| ExsB protein [Neisseria sicca ATCC 29256]
Length = 219
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 143/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 QNQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY GC+ CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYNSIVG-------GCHECPSCVLRERGLAEYLESKK 217
>gi|222053803|ref|YP_002536165.1| exsB protein [Geobacter sp. FRC-32]
gi|254764349|sp|B9M0M7|QUEC_GEOSF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|221563092|gb|ACM19064.1| exsB protein [Geobacter sp. FRC-32]
Length = 229
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L+SGG DS+TC++ A + +SFDYGQR+ VEL K +
Sbjct: 1 MKKKAVILYSGGLDSTTCMAIAREEGFEPYAMSFDYGQRHSVELATAKANAKTMGA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
+H++ L + S+LT ++ + + +P T+VP RN IFL FA A
Sbjct: 57 ------SEHLVVSFDLRKVGGSALTADLDVPKEGIGAGIPVTYVPARNTIFLSFALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKY 178
LG +I IGV DYSGYPDCR + I A E NL + V +H PL+ + K
Sbjct: 111 VLGAFDIFIGVNALDYSGYPDCRPEYIAAFEATANLATRAGVEGTGRFVIHAPLIAMTKA 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + +G + +H+CY G C C +C LR KG+ E
Sbjct: 171 EIIRKGLALG------VDYGRTHSCYD-----PTPEGLACGLCDSCRLRLKGFAEAG 216
>gi|270263114|ref|ZP_06191384.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
gi|270042802|gb|EFA15896.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
Length = 232
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 133/232 (57%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL+++D V ++FDYGQR++ E+E +
Sbjct: 2 KRAVVVFSGGQDSTTCLVQALEQYDEVHCITFDYGQRHRAEIEVARELA---------VA 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMK----IQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L + +L +++ SSLT++ + + Q LP+TFVPGRNI+FL A+ A
Sbjct: 53 LGVKGHKVLDVTMLNELAISSLTRDNIPVPAFNGTQPGGLPSTFVPGRNILFLTLASIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + ++A+ + LG+ + TPLMWL K E W L
Sbjct: 113 YQVEAQAVITGVCETDFSGYPDCRDEFVKALHHGVALGLARDIRFETPLMWLDKAEIWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A + V ++ TCY G + G GC C AC+LR +G ++
Sbjct: 173 ADYYRQLERVR---SDTLTCYNGVK------GEGCGECTACHLRAEGLAAYQ 215
>gi|15602051|ref|NP_245123.1| hypothetical protein PM0186 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|81637300|sp|Q9CP69|QUEC_PASMU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|12720406|gb|AAK02270.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 228
Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 137/237 (57%), Gaps = 22/237 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+++FSGGQDS+TCL A+ + + VE ++F YGQR+ +ELE + + +
Sbjct: 7 NRDRKAVVIFSGGQDSTTCLFQAIQDYGVENVEVVTFQYGQRHAIELEKAKWIAQDLG-- 64
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ ++ +++ I+ ++L A Q + PNTFV GRN +FL++ A A
Sbjct: 65 --------VKQTLIDTSVIKAITQNALMDEQARIEQHGSTPNTFVDGRNALFLLYTAIYA 116
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + TPLM+L K +TW+L
Sbjct: 117 KGQGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFHLKTPLMYLTKAQTWQL 176
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A ++G +++ I + +HTCY+G GC CP+C LR+KG E+ +
Sbjct: 177 ADELG---VLDYIRQHTHTCYMGVEQ-------GCGECPSCVLREKGLREYLSSKSE 223
>gi|330811383|ref|YP_004355845.1| transcription factor, ExsB family [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379491|gb|AEA70841.1| Putative transcription factor, ExsB family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 230
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 73/235 (31%), Positives = 108/235 (45%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A R T+SFDYGQR++ EL V + +
Sbjct: 9 EKRAVILLSGGLDSATVVAMARAEGYRCYTMSFDYGQRHRAELHAAERVARDL------- 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A
Sbjct: 62 --GVVEHKVIGLNLNG-IGGSALTDSSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEV 118
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
LG +I IGV DYSGYPDCR + + A E NL ++ V + PL L K +
Sbjct: 119 LGARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRILAPLQNLSKADI 178
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K +G + + +CY + G C C +C LR +G+
Sbjct: 179 VKAGVKLG------VDYGLTVSCYQAD-----DQGRACGKCDSCRLRAEGFAAAG 222
>gi|294668484|ref|ZP_06733581.1| ExsB protein [Neisseria elongata subsp. glycolytica ATCC 29315]
gi|291309447|gb|EFE50690.1| ExsB protein [Neisseria elongata subsp. glycolytica ATCC 29315]
Length = 219
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 145/236 (61%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL A+ + + V+T++F YGQR+ VELE + + +
Sbjct: 2 QNQQALVIFSGGQDSTTCLIQAIQTYGRENVQTITFQYGQRHAVELEHARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ + LPNTFV GRN +FL++AA A
Sbjct: 59 -------VKQIVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIKHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY G GC+ CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLESPK 217
>gi|225076556|ref|ZP_03719755.1| hypothetical protein NEIFLAOT_01604 [Neisseria flavescens
NRL30031/H210]
gi|224952056|gb|EEG33265.1| hypothetical protein NEIFLAOT_01604 [Neisseria flavescens
NRL30031/H210]
Length = 219
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 143/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ +ELE + + +
Sbjct: 2 EKQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAIELERARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A ++ + LPNTFV GRN +FL++AA A
Sbjct: 59 -------VKQRVLDLSLMQQITHNALMDDTASIETASDGLPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E +HTCY G GC+ CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYICEHTHTCYNGVVG-------GCHECPSCILRERGLSEYLESKK 217
>gi|94263299|ref|ZP_01287115.1| ExsB [delta proteobacterium MLMS-1]
gi|93456382|gb|EAT06506.1| ExsB [delta proteobacterium MLMS-1]
Length = 239
Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats.
Identities = 81/254 (31%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + + +A++L SGG DS+T L+WA R LSFDYGQR+ ELE +
Sbjct: 1 MTENNQPGEAAVVLLSGGLDSTTVLAWASTAGYRCHCLSFDYGQRHTHELELARQNAARW 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--------------NNLPNT 106
+ H++ L I S+LT +A+ D +P T
Sbjct: 61 GAV----------QHLVLKLGLEAIGGSALTSELAVPKADPAGTLSTDPAETGAGQIPVT 110
Query: 107 FVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--- 163
+VPGRN IFL A A LG I IGV DYSGYPDCR D + + NLG +
Sbjct: 111 YVPGRNTIFLSCAVAWAEVLGAGEIFIGVNAVDYSGYPDCRPDFLESFNRTANLGTKAGR 170
Query: 164 --SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSC 221
+ PL+ L K E K +G + +H+CY R C C
Sbjct: 171 EGRGFRIQAPLLRLSKAEIIKKGLALG------VDYSLTHSCYDPDEHHR-----PCGRC 219
Query: 222 PACYLRQKGWMEFK 235
AC LR++G+
Sbjct: 220 DACRLRRRGFAAAG 233
>gi|254361904|ref|ZP_04978037.1| PP-loop superfamily ATPase [Mannheimia haemolytica PHL213]
gi|261492300|ref|ZP_05988862.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495369|ref|ZP_05991818.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153093445|gb|EDN74433.1| PP-loop superfamily ATPase [Mannheimia haemolytica PHL213]
gi|261308972|gb|EEY10226.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311983|gb|EEY13124.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 222
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 136/238 (57%), Gaps = 22/238 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ + P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + +
Sbjct: 1 MTHQKPKAVVIFSGGQDSTTCLFQAIAEFGKENVEVVTFQYGQRHSIELEKARWISNDLG 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ ++ +++ I+ ++L N A Q + PNTFV GRN +FL++ A
Sbjct: 61 ----------VKQTLIDTSVIKAITTNALMDNNAEIQQQGSTPNTFVDGRNALFLLYTAI 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A GI I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K ETW
Sbjct: 111 YAKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKETW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
LA +G + I + +HTCYLG GC+ CP+C LR+KG E+ + +
Sbjct: 171 ALADKLGAF---DYIRDHTHTCYLGVEG-------GCHDCPSCVLREKGLNEYLAERE 218
>gi|117923750|ref|YP_864367.1| exsB protein [Magnetococcus sp. MC-1]
gi|189038921|sp|A0L4R8|QUEC_MAGSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|117607506|gb|ABK42961.1| preQ(0) biosynthesis protein QueC [Magnetococcus sp. MC-1]
Length = 228
Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 113/239 (47%), Gaps = 29/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ SA++L SGG DS+T L A R+ LSF YGQR+ +ELE +
Sbjct: 1 MPTIMSAVVLLSGGLDSATVLRMAHATGQRIHALSFRYGQRHTMELEMARKQALSLP--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAAT 121
G H + L S+LT ++ + + +N +P T+VP RN++FL A
Sbjct: 58 -------GVAHRIMDLQLSLFGGSALTADIPVPKGGVDENTIPVTYVPARNMVFLSLALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
A LG ++ IGV DYSGYPDCR + I++ + NL ++ V VHTPL+ L
Sbjct: 111 WAESLGAQHLYIGVNAVDYSGYPDCRPEFIQSFQQTANLATKAGVEGHPFTVHTPLINLT 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + +G + + +CY G GC C AC LR +G+ E
Sbjct: 171 KAQIIQQGLALG------VDYGLTRSCYDPD-----AQGAGCGLCDACRLRLQGFAEAG 218
>gi|149175149|ref|ZP_01853772.1| ExsB [Planctomyces maris DSM 8797]
gi|148846127|gb|EDL60467.1| ExsB [Planctomyces maris DSM 8797]
Length = 233
Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 33/244 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + P A++L SGG DS+T L+ A D + LSFDYGQR++ ELE V +
Sbjct: 1 MTTEVPKAVVLVSGGLDSATTLAIAADAGFELYALSFDYGQRHRHELEAAKKVCQAFD-- 58
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLV 117
+ ++ L S+LT ++ + + +P T+VP RN +FL
Sbjct: 59 --------VKKFVIFPLDLRVFGGSALTADIDVPKDRSEHDLETGIPITYVPARNTVFLS 110
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTP 171
A A L ++ IGV DYSGYPDCR + I A +T +L + H +HTP
Sbjct: 111 LALAWAETLNAYDLFIGVNAVDYSGYPDCRPEFISAFQTVASLATKTGVEHSGHWKIHTP 170
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ LKK + K ++G + +H+CY D G C C +C LR KG+
Sbjct: 171 LISLKKADIIKTGMELG------VDYGLTHSCYDPLPD-----GTPCGHCDSCQLRAKGF 219
Query: 232 MEFK 235
E
Sbjct: 220 AEAG 223
>gi|94266965|ref|ZP_01290615.1| ExsB [delta proteobacterium MLMS-1]
gi|93452343|gb|EAT02971.1| ExsB [delta proteobacterium MLMS-1]
Length = 239
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 81/254 (31%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + + +A++L SGG DS+T L+WA R LSFDYGQR+ ELE +
Sbjct: 1 MTENNQPGEAAVVLLSGGLDSTTVLAWASTAGYRCHCLSFDYGQRHTHELELARQNAARW 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--------------NNLPNT 106
+ H++ L I S+LT +A+ D +P T
Sbjct: 61 GAV----------QHLVLRLGLEAIGGSALTSELAVPKADPAGTLSTDPAETGAGQIPVT 110
Query: 107 FVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--- 163
+VPGRN IFL A A LG I IGV DYSGYPDCR D + + NLG +
Sbjct: 111 YVPGRNTIFLSCAVAWAEVLGAGEIFIGVNAVDYSGYPDCRPDFLESFNRTANLGTKAGR 170
Query: 164 --SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSC 221
+ PL+ L K E K +G + +H+CY R C C
Sbjct: 171 EGRGFRIQAPLLRLSKAEIIKKGLALG------VDYSLTHSCYDPDEHHR-----PCGRC 219
Query: 222 PACYLRQKGWMEFK 235
AC LR++G+
Sbjct: 220 DACRLRRRGFAAAG 233
>gi|309379634|emb|CBX21805.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 218
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 141/237 (59%), Gaps = 23/237 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V ++F YGQR+ VELE + + +
Sbjct: 2 SNQQALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ L ++ I+H++L A ++ +N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VPQTLVDLNLMKTITHNALMDEAAAIETAENGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A ++G +++ I E++HTCY G GC+ CP+C LR++G E+ E D
Sbjct: 172 ADEMG---VLDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLESIVD 218
>gi|294789668|ref|ZP_06754901.1| ExsB protein [Simonsiella muelleri ATCC 29453]
gi|294482380|gb|EFG30074.1| ExsB protein [Simonsiella muelleri ATCC 29453]
Length = 218
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 139/234 (59%), Gaps = 22/234 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ AL++FSGGQDS+TCL A++ F V+ ++F YGQR+ +ELE + + +
Sbjct: 1 MTIQKQALVIFSGGQDSTTCLFQAINEFGVGNVQAITFTYGQRHAIELERAQWIAQDLR- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +L L+++G I+H++L N A +LPNTFV GRN +FL++AA
Sbjct: 60 ---------VKQTVLDLSLIGSITHNALMDNTAAIDTSGSLPNTFVDGRNALFLLYAAIY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A I I +GVCETD+SGYPDCR ++++ +NL M + TPLM+L K ETW
Sbjct: 111 AKSQNIHTIFVGVCETDFSGYPDCRDVFVKSMNVTLNLAMAYDFDIRTPLMYLTKKETWA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA +G +++ + E +HTCYLG + GC+ CP+C LR++G E+ +
Sbjct: 171 LADQMG---VLDYVREHTHTCYLGVPN-------GCHECPSCVLRERGLSEYLQ 214
>gi|332968838|gb|EGK07885.1| transcription regulator ExsB [Kingella kingae ATCC 23330]
Length = 226
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 144/233 (61%), Gaps = 23/233 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + L++FSGGQDS+TCL A+ ++ D V+ ++F YGQR+ +EL+ + +++
Sbjct: 1 MTQNKRVLVIFSGGQDSTTCLIQAIAQYGKDHVQAMTFAYGQRHAIELQRATEIAQELG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L L+++G I+H++L + A ++ QDN LPNTFV GRN +FL++AA
Sbjct: 60 ---------IAQTVLDLSLVGSITHNALMDSQARIQTQDNGLPNTFVDGRNALFLLYAAI 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A I +IVIGVCETD+SGYPDCR I +++ + L M+ +HTPLM+L K +TW
Sbjct: 111 YAKSQQIHDIVIGVCETDFSGYPDCRQVFIDSMQQTLQLAMDYEFRLHTPLMYLTKKQTW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LA ++G ++ + +HTCY+G GC+ CP+C LR++G E+
Sbjct: 171 ALADELGA---LDFVRTRTHTCYMGVDG-------GCHECPSCVLRERGLQEY 213
>gi|319779038|ref|YP_004129951.1| Queuosine Biosynthesis QueC ATPase [Taylorella equigenitalis MCE9]
gi|317109062|gb|ADU91808.1| Queuosine Biosynthesis QueC ATPase [Taylorella equigenitalis MCE9]
Length = 222
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 140/237 (59%), Gaps = 23/237 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL A++ F V+ ++F YGQR+++EL+ +
Sbjct: 1 MSEKALVVFSGGQDSTTCLLQAIENFGVGNVKAITFIYGQRHEIELKKAREIA------- 53
Query: 65 PKWKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
D E IL L+++ I+ ++ + K +K ++ LPNTFV GRN +FL+++ A
Sbjct: 54 ---IDLGIEQTILDLSVMKSITTNALMQKGAEIKTDESGLPNTFVDGRNALFLLYSCIYA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI NIVIGVCETD+SGYPDCR ++++ ++NL M+ +HTPLMWL K +TW+L
Sbjct: 111 KSQGIKNIVIGVCETDFSGYPDCRDIFVKSMNVSMNLAMDYDFVIHTPLMWLTKAQTWEL 170
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A +G ++ + +HTCY G GC +CP+C LR +G E+ +
Sbjct: 171 ADKLG---RLDYVRTRTHTCYEGVEG-------GCGNCPSCVLRNRGLEEYLNSKNE 217
>gi|28871113|ref|NP_793732.1| exsB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|81730072|sp|Q87Y44|QUEC_PSESM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|28854363|gb|AAO57427.1| exsB protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 226
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 28/235 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + + +
Sbjct: 1 MTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDLGAV 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E ++ L L I S+LT + + +P T+VP RN +FL A
Sbjct: 61 ---------EHKVIGL-NLSGIGGSALTDSSIAVPESPSEGIPVTYVPARNTVFLSLALG 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL L
Sbjct: 111 WAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNLS 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + K +G + + +CY + G C C +C LR +G+
Sbjct: 171 KSDIVKAGIALG------VDYALTVSCYQAD-----DQGRACGKCDSCRLRAEGF 214
>gi|268680496|ref|YP_003304927.1| exsB protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618527|gb|ACZ12892.1| exsB protein [Sulfurospirillum deleyianum DSM 6946]
Length = 222
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 151/231 (65%), Gaps = 17/231 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL++FSGGQDS+TCL WA +RF+ VE+++FDYGQ++KVE+ +KI L+
Sbjct: 3 KALVVFSGGQDSTTCLGWAKNRFEYVESITFDYGQKHKVEI----AQAQKIASLLHV--- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ +L L ++ S+L + A NLP +FVP RN IF A A +
Sbjct: 56 ---KNTLLSLDAFSQLNDSALIDSTQDIGAHHRVHTNLPASFVPNRNAIFFTLAHAFAQK 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
GI +I+IGV +TDYSGYPDCR ++A+E A+NLG E+++T H PLM L K ET+ L++
Sbjct: 113 QGIEHIIIGVNQTDYSGYPDCREPFVKALELALNLGSEANITFHYPLMHLTKAETFLLSK 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ G +++L+L ESHTCY G+ +++ WGYGC CPAC LR++GW +++
Sbjct: 173 EEG---VLDLVLNESHTCYNGEHSEKHTWGYGCGECPACVLRKQGWEAYEK 220
>gi|304408386|ref|ZP_07390033.1| exsB protein [Paenibacillus curdlanolyticus YK9]
gi|304342675|gb|EFM08522.1| exsB protein [Paenibacillus curdlanolyticus YK9]
Length = 240
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 38/247 (15%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A+++ SGG DS+TC+ +A + + L+FDYGQR+++ELE V + +
Sbjct: 4 NKNKKAVIILSGGLDSTTCMGFAKEAGYELFPLTFDYGQRHRIELEKSRQVAEHYGVIDR 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN------------VAMKIQDNNLPNTFVPGRNI 113
++ L L +I S+LT + ++ ++ +P T+VPGRN
Sbjct: 64 Y--------KVIKLDFLRNIGGSALTDEAIAVPKGTGVEQMDVEQAESEIPVTYVPGRNF 115
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTV 168
+FL A + A +G I IGV DYSGYPDCR + I +E + L + +++
Sbjct: 116 MFLAIATSYAEAVGAEAIYIGVNALDYSGYPDCRPEFIAKVEEVMALATKVGVEGKPISI 175
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
TPL+ L K + + +G + E + +CY G+ + C C +C LR
Sbjct: 176 ETPLIALSKADIVREGVRMG------VPYELTTSCYNGEEE-------ACGECDSCVLRL 222
Query: 229 KGWMEFK 235
KG+ E
Sbjct: 223 KGFSEAG 229
>gi|325111074|ref|YP_004272142.1| preQ(0) biosynthesis protein QueC [Planctomyces brasiliensis DSM
5305]
gi|324971342|gb|ADY62120.1| preQ(0) biosynthesis protein QueC [Planctomyces brasiliensis DSM
5305]
Length = 230
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 33/243 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A++L SGG DSST L+ A ++ + +SFDYGQ+++ EL+ + +
Sbjct: 1 MNAPRKAVVLLSGGLDSSTTLAIAREQGFELWAISFDYGQKHRFELDAARRLAQAFD--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVF 118
+ H++ LG S+LT ++ + + +P T+VP RN +FL
Sbjct: 58 -------VKKHVIVKIDLGAFGGSALTSDIEVPKDRSTDQMEAAIPITYVPARNTVFLST 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPL 172
A A L +++ IGV DYSGYPDCR + + A NL ++ V VH PL
Sbjct: 111 ALGWAETLDCSDLFIGVNAVDYSGYPDCRPEFVEAFTRLANLATKTGVEGTADWKVHAPL 170
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K + + +G + +HTCY G C C AC LR +G+
Sbjct: 171 IDLTKADIIRKGTALG------VDYAMTHTCYDPNE-----AGLACGHCDACQLRLQGFE 219
Query: 233 EFK 235
+
Sbjct: 220 QAG 222
>gi|90417120|ref|ZP_01225048.1| exsB protein [marine gamma proteobacterium HTCC2207]
gi|90331136|gb|EAS46392.1| exsB protein [marine gamma proteobacterium HTCC2207]
Length = 226
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 117/238 (49%), Gaps = 28/238 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A A++L SGG DS+T ++ A + TLSFDYGQR++ EL +KI ELM
Sbjct: 1 MAKKAVILVSGGLDSTTVVAMAKSQGYDCYTLSFDYGQRHRSEL----VAAQKISELMTV 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAM--KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
H + LG I S+LT + + + +P T+VP RN +FL A A
Sbjct: 57 HA------HKVVKLDLGSIGGSALTDSSIEVPETETTGIPVTYVPARNTVFLSIALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
LG +I +GV DYSGYPDCR + I+A ET NL ++ V +H PL+ L K +
Sbjct: 111 VLGANDIFLGVNAVDYSGYPDCRPEYIKAFETMANLATKAAVEGQKLTIHAPLIDLTKGQ 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G + + +CY + G C C +C LR++G+ + K
Sbjct: 171 IVEAGMALG------VDYSNTVSCYQANLE-----GEACGKCESCRLRRQGFEQAGIK 217
>gi|85860086|ref|YP_462288.1| queuosine biosynthesis protein [Syntrophus aciditrophicus SB]
gi|110816269|sp|Q2LVL3|QUEC_SYNAS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|85723177|gb|ABC78120.1| queuosine biosynthesis protein [Syntrophus aciditrophicus SB]
Length = 231
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 33/243 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A++L SGG DS+T ++ A + L+F YGQR+ VELE + +
Sbjct: 1 MSPKKKAVVLLSGGLDSATTMAIAKAENYELYALTFQYGQRHAVELEAARRIAAALGA-- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNIIFLVF 118
++H+ L I S+LT + + +P T+VP RN IFL +
Sbjct: 59 --------KEHLFISIDLRIIGGSALTGPFEVPKKQEGEETSAEIPVTYVPARNTIFLSY 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPL 172
A A L I+ I IGV DYSGYPDCR + I A E NL +++ V + TPL
Sbjct: 111 ALAWAEVLQISEIFIGVNAVDYSGYPDCRPEYITAFEAMANLAIKAAVEGTMRVKIRTPL 170
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K + + + ++ +H+CY D G C C +C+LR+KG+
Sbjct: 171 IDLSKADIIRKGMAL------SVDYGLTHSCYDPLPD-----GKPCGQCDSCHLRRKGFR 219
Query: 233 EFK 235
E
Sbjct: 220 EAG 222
>gi|229592291|ref|YP_002874410.1| putative transcriptional regulator [Pseudomonas fluorescens SBW25]
gi|259551561|sp|C3JYR8|QUEC_PSEFS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|229364157|emb|CAY51802.1| putative transcriptional regulatory protein [Pseudomonas
fluorescens SBW25]
Length = 224
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 107/235 (45%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A + T+SFDYGQR++ EL V + +
Sbjct: 3 QKRAVILLSGGLDSATVVAMAQAQGYSCYTMSFDYGQRHRAELNAAARVARDM------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A
Sbjct: 56 --GVVEHKVIGLNLNG-IGGSALTDSSIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + + E NL ++ V + PL L K +
Sbjct: 113 LNARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFRILAPLQNLSKADI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K +G + + +CY D G C C +C LR +G+
Sbjct: 173 VKAGVGLG------VDYSLTVSCYQADDD-----GRACGKCDSCRLRAEGFQAAG 216
>gi|254428689|ref|ZP_05042396.1| exsB protein [Alcanivorax sp. DG881]
gi|196194858|gb|EDX89817.1| exsB protein [Alcanivorax sp. DG881]
Length = 222
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 113/236 (47%), Gaps = 28/236 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A D+ T++FDYGQR + EL+ + V + L
Sbjct: 2 KKAVVLLSGGLDSATCLAIARDQGYECHTIAFDYGQRTRSELDAAVQVSGALGAL----- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRL 126
H + +G+I S+LT + +D +P T+VP RN +FL A LA +
Sbjct: 57 -----SHRVIELGMGNIGGSALTDHSIDVPEDGGEGIPVTYVPARNTVFLSLALGLAEVV 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
I IGV DYSGYPDCR I A ++ NL ++ V + TPLM L K +
Sbjct: 112 DAQAIFIGVNAVDYSGYPDCRPAFIEAFQSMANLATKAGVEGRPMQIETPLMHLSKAQII 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G L + +CY + G C C +C LR +G+ + K
Sbjct: 172 QQGVALG------LDYGLTVSCYQADEN-----GNACGKCDSCRLRSQGFEDALVK 216
>gi|77920572|ref|YP_358387.1| putative transcriptional regulator [Pelobacter carbinolicus DSM
2380]
gi|110816239|sp|Q3A090|QUEC_PELCD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|77546655|gb|ABA90217.1| preQ(0) biosynthesis protein QueC [Pelobacter carbinolicus DSM
2380]
Length = 230
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 113/238 (47%), Gaps = 30/238 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L+SGG DS+TCL+ A LSF YGQR+ VELE ++
Sbjct: 1 MSKKAVVLYSGGLDSTTCLAEARAAGFTPYALSFHYGQRHTVELEKARLYAPQVGA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLA 123
DH++ L I S+LT + + D+ +P T+VP RN IFL FA A
Sbjct: 57 ------ADHMVIDFDLRRIGGSALTSDEEVPKGREIDDAIPVTYVPARNTIFLSFALGWA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKK 177
LG +I IGV DYSGYPDCR + I A E NL ++ V VH PL+ L K
Sbjct: 111 EVLGSFDIFIGVNALDYSGYPDCRPEFISAFEQLANLATKAGVEGQGQYRVHAPLLHLTK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ K ++G + +H+CY G C C +C LR KG+ E
Sbjct: 171 AQIIKRGLELG------VDYSLTHSCYD-----PTPEGLACGLCDSCQLRLKGFAEAG 217
>gi|313668995|ref|YP_004049279.1| queuosine biosynthesis protein QueC [Neisseria lactamica ST-640]
gi|313006457|emb|CBN87920.1| queuosine biosynthesis protein QueC (ec 3.5.-.-) [Neisseria
lactamica 020-06]
Length = 219
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 139/236 (58%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V ++F YGQR+ VELE + + +
Sbjct: 2 SNQQALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ L ++ I+H++L A ++ N +PNTFV GRN +FL++AA A
Sbjct: 59 -------VPQTLVDLNLMKTITHNALMDEAASIETAGNGVPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E++HTCY G GC+ CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCILRERGLAEYLESKK 217
>gi|322514964|ref|ZP_08067977.1| transcription regulator ExsB [Actinobacillus ureae ATCC 25976]
gi|322119072|gb|EFX91232.1| transcription regulator ExsB [Actinobacillus ureae ATCC 25976]
Length = 222
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 137/235 (58%), Gaps = 23/235 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + K +
Sbjct: 1 MNSIPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ +++ I+ +++ + +K Q+ N PNTFV GRN +FL++ A
Sbjct: 60 ---------VKQTLIDTSVIKAITSNAMMEVREIK-QEGNTPNTFVDGRNALFLLYTAIY 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A I I GVCETD+SGYPDCR ++++ +NL M+ + + TPLM+L K +TW
Sbjct: 110 AKGQDIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA +G + I + +HTCYLG GC++CP+C LR+KG E+ +
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCILREKGLNEYLSE 214
>gi|110825738|sp|P44124|QUEC_HAEIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 228
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 85/233 (36%), Positives = 141/233 (60%), Gaps = 24/233 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-HTPLMWLKKYETWKLA 184
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPIPISKTPLMYLTKAQTWQLA 179
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G +++ + + +HTCY G GC CP+C LR KG ++ +
Sbjct: 180 DELG---VLDYVQKHTHTCYEGIEG-------GCRKCPSCILRNKGLKKYLTQ 222
>gi|116619444|ref|YP_821600.1| exsB protein [Candidatus Solibacter usitatus Ellin6076]
gi|116222606|gb|ABJ81315.1| exsB protein [Candidatus Solibacter usitatus Ellin6076]
Length = 223
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 115/241 (47%), Gaps = 33/241 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P+A+ L SGG DS+TCL+ A LSFDYGQR+KVEL+ V + +
Sbjct: 2 PNAVCLLSGGLDSATCLALARREGYSCYALSFDYGQRHKVELDAAARVAQALGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAATL 122
E H++ L S+LT + + +P T+VP RN IFL FA
Sbjct: 56 ----ERHLVVKIGLDVFGGSALTAAIDVPKGRSTGEMGAGIPITYVPARNTIFLSFALAW 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLK 176
A LG ++I IGV DYSGYPDCR + I A E NL + V +HTPL+ L
Sbjct: 112 AEVLGSSDIFIGVNALDYSGYPDCRPEYIEAYERLANLATRAGVEGTTRMKIHTPLLHLS 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K KL +++G L + +CY G C C AC LR+KG+ E
Sbjct: 172 KAGIVKLGRELG------LDFGLTFSCYDPG-----PGGLACGQCDACLLRRKGFDEAGI 220
Query: 237 K 237
+
Sbjct: 221 E 221
>gi|283853630|ref|ZP_06370865.1| exsB protein [Desulfovibrio sp. FW1012B]
gi|283570992|gb|EFC19017.1| exsB protein [Desulfovibrio sp. FW1012B]
Length = 233
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 114/242 (47%), Gaps = 33/242 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ P A++LFSGG DS+TCL+ A LSF+YGQR+ VE +
Sbjct: 1 MTAQPKAVVLFSGGLDSTTCLAVARSEGFLPCALSFEYGQRHSVE---------LLAARR 51
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVF 118
+ ILPL LG I S+LT ++ + + +P T+VP RN IFL
Sbjct: 52 VAAALDVHAHLILPLP-LGAIGGSALTADIDVPKDRDPATMETEIPATYVPARNTIFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPL 172
A A LG +I IGV DYSGYPDCR I A E NL ++ + +HTPL
Sbjct: 111 ALGWAEVLGAEDIFIGVNALDYSGYPDCRPQFIAAFEAMANLAVKEAVEGRLRIRIHTPL 170
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K +L +G + +H+CY + G C C +C LR+KG+
Sbjct: 171 LHLTKAGIVRLGTSLG------VDFGLTHSCYDPTEE-----GLACGRCDSCLLRKKGFE 219
Query: 233 EF 234
E
Sbjct: 220 EA 221
>gi|153876460|ref|ZP_02003770.1| ExsB family protein [Beggiatoa sp. PS]
gi|152067076|gb|EDN66230.1| ExsB family protein [Beggiatoa sp. PS]
Length = 225
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 23/228 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A + LSFDYGQR+++EL+ V + + + K+
Sbjct: 2 KKAVILVSGGLDSTTTLAIAKSQGYACYALSFDYGQRHRIELQAARQVAEHLGVVEHKFI 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ L +G + + NV + + +P T+VP RN +FL A A L
Sbjct: 62 H-------INLDSIGGSALTDTQINVPTQGLSDQIPITYVPARNTVFLALALGWAEVLSA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR + A E N ++ V +HTPL+ L K + +
Sbjct: 115 YHIFIGVNAVDYSGYPDCRPKFVEAFEQLANFATKAGVEGHSFKIHTPLIHLTKAQIIQE 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + + +CY GY C C AC LR G+
Sbjct: 175 GLRLG------VDYNLTISCYQ-----PNPNGYACGMCDACRLRADGF 211
>gi|260887290|ref|ZP_05898553.1| ExsB protein [Selenomonas sputigena ATCC 35185]
gi|330838956|ref|YP_004413536.1| exsB protein [Selenomonas sputigena ATCC 35185]
gi|260862926|gb|EEX77426.1| ExsB protein [Selenomonas sputigena ATCC 35185]
gi|329746720|gb|AEC00077.1| exsB protein [Selenomonas sputigena ATCC 35185]
Length = 224
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 32/238 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TC++ A ++ + +SFDY QR+ +ELE KKI +
Sbjct: 2 EKAVVLLSGGLDSTTCMAVAKEQGKELYPISFDYHQRHSIELEGA----KKIAAFYKVNR 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
H++ + I S+LT + + ++P T+VP RN+IFL +A A
Sbjct: 58 ------HLIIETNMEAIGGSALTDDSIAVPEGDVSRTSVPVTYVPARNLIFLSYALGYAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
+G ++ IGV DYSGYPDCR + IR + + E + + TPL L K +
Sbjct: 112 TIGARSVYIGVNSVDYSGYPDCRPEFIRHFQAVADYSTEAASEGKRIEIVTPLQNLSKAD 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+LA + + LE +H+CY G C C +C LR +G+ K
Sbjct: 172 IVRLATRLA------VPLELTHSCYSGGEK-------ACGVCDSCKLRLQGFAAAGIK 216
>gi|300866059|ref|ZP_07110789.1| 7-cyano-7-deazaguanine synthase [Oscillatoria sp. PCC 6506]
gi|300335920|emb|CBN55947.1| 7-cyano-7-deazaguanine synthase [Oscillatoria sp. PCC 6506]
Length = 231
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A T+SFDY QR+ ELE +
Sbjct: 2 KAVVLLSGGLDSSTVLYQAQADGCESYTISFDYQQRHLRELESAKAIA---------LSA 52
Query: 70 SLGEDHIL--PLAILGDISHSSL----TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + ++ L++ G + + ++ + ++P T+VP RN IFL FA A
Sbjct: 53 GVVKHQVVSFDLSLWGGSALTDNKIDFPRDRTLAQMSESIPITYVPARNTIFLSFALAWA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
L I IGV DYSGYPDCR D I+A++ LG + + +++ TPL+ LKK
Sbjct: 113 ETLNADRIYIGVNALDYSGYPDCRPDYIQAMQEVFRLGTKQGREGNPISILTPLIDLKKT 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E KL +G + E++ +CY G C C +C LR + E
Sbjct: 173 EIIKLGNHLG------VPWEKTWSCYAGGE-------LACGLCDSCRLRVAAFEELG 216
>gi|192361867|ref|YP_001983292.1| exsB protein [Cellvibrio japonicus Ueda107]
gi|254764318|sp|B3PC22|QUEC_CELJU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|190688032|gb|ACE85710.1| exsB protein [Cellvibrio japonicus Ueda107]
Length = 225
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 113/236 (47%), Gaps = 28/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T ++ A + T+SFDYGQR++ EL+ K
Sbjct: 2 SRKKAVILVSGGLDSTTVIAIARSQGYDCYTISFDYGQRHRAELKAAEITAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAY 124
E ++ L LG I S+LT ++ + ++ + +P T+VP RN +FL A A
Sbjct: 54 -AHGSLEHKVIRLD-LGAIGGSALTDTSIDVPEEETSGIPVTYVPARNTVFLSIALGWAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
LG +I IGV DYSGYPDCR D I A ET NL + + + TPL+ L K +
Sbjct: 112 VLGALDIFIGVNAVDYSGYPDCRPDYIAAYETMANLATKRGIEGERLHIRTPLINLTKAQ 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY G C C +C LR++G+ +
Sbjct: 172 IIQQGLALG------VDYRLTVSCYQANDG-----GEACGKCDSCRLRKQGFEQAG 216
>gi|325295563|ref|YP_004282077.1| exsB protein [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325066011|gb|ADY74018.1| exsB protein [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 233
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 116/241 (48%), Gaps = 36/241 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+++ SGG DS+T L WA F++V ++F YGQR+ +E+E + KK
Sbjct: 3 SAIVILSGGLDSTTALYWAKKNFNKVFAITFYYGQRHSLEVEMARIIAKKAK-------- 54
Query: 70 SLGEDHILPLAILGDISHSSLTK--------NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E+HIL + S+LT +I++ +P T+VP RN IFL AA
Sbjct: 55 --VEEHILFEVDISKFGGSALTDKNLEVPETQSIEEIKERGIPITYVPFRNGIFLSIAAA 112
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLK 176
A TN+V G DYSGYPDCR + + A+E A+N G + +H PL+ L
Sbjct: 113 YAETKNTTNLVGGWNAVDYSGYPDCRPEFLAAMEEALNKGTKLGSEGKSWKIHAPLINLT 172
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K E KL +G S +CY G C C +C LR KGWME +
Sbjct: 173 KGEIIKLGLSLGA------DYSYSISCYRGTE-------VPCGKCDSCVLRAKGWMEVGK 219
Query: 237 K 237
+
Sbjct: 220 E 220
>gi|332828637|gb|EGK01333.1| 7-cyano-7-deazaguanine synthase [Dysgonomonas gadei ATCC BAA-286]
Length = 221
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 133/234 (56%), Gaps = 21/234 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K AL+LFSGGQDS+TCL WA++ F V TL F YGQR+ E+E +
Sbjct: 1 MNKKEPALVLFSGGQDSTTCLYWAIENFSSVRTLCFTYGQRHSKEVEVAQSIA------- 53
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +L +I+ +S +SLT ++ + ++ PNTFVPGRN++FL FAA +
Sbjct: 54 ---GHAGVPFQLLDASIISQLSVNSLTSDIVMDQEKPADSYPNTFVPGRNLLFLTFAAVI 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A GI +IV GV E DYSGYPDCR I + +INL M+ H +HTPLMW K W+
Sbjct: 111 ARSHGIRHIVTGVSEADYSGYPDCRDTFILSANASINLAMDEHFQIHTPLMWRDKTAVWQ 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
LA +G + +++ ++ TCY G GC CPAC LR++G + +
Sbjct: 171 LADQLG---VFDVVRTQTLTCYNGI------IADGCGHCPACKLRKQGLENYLK 215
>gi|261401301|ref|ZP_05987426.1| ExsB protein [Neisseria lactamica ATCC 23970]
gi|269208680|gb|EEZ75135.1| ExsB protein [Neisseria lactamica ATCC 23970]
Length = 218
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 140/237 (59%), Gaps = 23/237 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V ++F YGQR+ VELE + + +
Sbjct: 2 SNQQALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ L ++ I+H++L A ++ DN +PNTFV GRN +FL++AA A
Sbjct: 59 -------VPQTLVDLNLMKTITHNALMDEAAAIETVDNGVPNTFVDGRNALFLLYAAIHA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A ++G ++ I E++HTCY G GC+ CP+C LR++G E+ E D
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCILRERGLAEYLESIVD 218
>gi|302343484|ref|YP_003808013.1| exsB protein [Desulfarculus baarsii DSM 2075]
gi|301640097|gb|ADK85419.1| exsB protein [Desulfarculus baarsii DSM 2075]
Length = 234
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 33/242 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ P A++L SGG DS+TCL+ A D+ LSF YGQR+ VEL V + +
Sbjct: 6 QKPPAVVLLSGGLDSATCLAMANDQGFEPHALSFRYGQRHAVELLAAQRVAQALGARR-- 63
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAA 120
H++ L + S+LT ++A+ + +P T+VP RN +FL A
Sbjct: 64 --------HLILDVDLRGVGGSALTADMAVPKGRSLAEMTDGVPVTYVPARNTLFLSLAL 115
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMW 174
A L +I IGV DYSGYPDCR + I A E NL + ++ VH PL+
Sbjct: 116 AWAETLDCADIFIGVNALDYSGYPDCRPEFILAFENLANLATKMSTEQGRYIRVHAPLIR 175
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ K + + +G + +H+CY D G C C +C LR KG+ E
Sbjct: 176 MTKAQIIRAGLALG------VDYGLTHSCYDPDAD-----GKPCGQCDSCLLRAKGFAEA 224
Query: 235 KE 236
K
Sbjct: 225 KT 226
>gi|220935393|ref|YP_002514292.1| ExsB ATPase [Thioalkalivibrio sp. HL-EbGR7]
gi|219996703|gb|ACL73305.1| ExsB ATPase [Thioalkalivibrio sp. HL-EbGR7]
Length = 229
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 24/237 (10%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +A++L SGG DS+T L+ A ++ LSF YGQR++ EL+ V K +
Sbjct: 1 MSSAQRNAVVLLSGGMDSATVLAIAREQGYVCHALSFRYGQRHRAELDAAARVAKSQGAV 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ D L L++ G + + ++ + +P T+VP RN +FL A A
Sbjct: 61 RHQVVD-------LDLSLFGGSALTDSRIDLP-ETPSEGIPVTYVPARNTVFLSVALAWA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY 178
L +I IGV DYSGYPDCR I A E NL + V +H PL +L K
Sbjct: 113 EVLPARDIFIGVNAVDYSGYPDCRPAFIEAFERLANLATRAGVEGRQLSIHAPLQYLSKA 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + ++G + E+ TCY G C C AC LR +G+ +
Sbjct: 173 DIIRRGTELG------VDFAETVTCYGADAK-----GLACGVCDACRLRAQGFADAG 218
>gi|116749415|ref|YP_846102.1| exsB protein [Syntrophobacter fumaroxidans MPOB]
gi|189029540|sp|A0LJR5|QUEC_SYNFM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|116698479|gb|ABK17667.1| exsB protein [Syntrophobacter fumaroxidans MPOB]
Length = 234
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 115/242 (47%), Gaps = 33/242 (13%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A++LFSGG DS+TCL+ A LSF Y QR+ VE+E +
Sbjct: 4 EHRRKAVVLFSGGIDSTTCLAVAKAEGFEAYALSFFYHQRHGVEVEAARRSAPALGA--- 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT------KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+H++ L I S+LT K+V ++ + +P T+VP RN IFL FA
Sbjct: 61 -------REHLVLELPLDRIGGSALTGHEEVPKDVPVEKMSDRIPATYVPARNTIFLSFA 113
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLM 173
A LG +I IGV DYSGYPDCR + I A E NL + + VHTPL+
Sbjct: 114 LAWAEVLGAADIFIGVNALDYSGYPDCRPEYIAAFERMANLAIRETVEGRMRIKVHTPLI 173
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K E K ++G L +H+CY G C C +C LR+KG+ME
Sbjct: 174 RLTKGEIIKRGLELG------LDYSLTHSCYDPD-----ARGLACGHCDSCILRKKGFME 222
Query: 234 FK 235
Sbjct: 223 AG 224
>gi|152990536|ref|YP_001356258.1| ExsB family transcriptional regulator [Nitratiruptor sp. SB155-2]
gi|189038929|sp|A6Q342|QUEC_NITSB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151422397|dbj|BAF69901.1| transcriptional regulator, ExsB family [Nitratiruptor sp. SB155-2]
Length = 220
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 29/234 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
A+++ SGG DSS A + + F+YGQR + ELE +
Sbjct: 2 KAVVILSGGMDSSITAYMAKKDGYEIIAVHFNYGQRTEQKELEAFRAIA----------G 51
Query: 69 DSLGEDHILPLAILGDISHSSLTK-NVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + + L I S+L N+A+ Q + +P T+VP RN IFL AA +A +
Sbjct: 52 ELNAKTYEIDLPFFEQIGASALIDTNIAIPKQGIEPGIPVTYVPFRNGIFLSVAAAIAEK 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
G +I IGV E D SGYPDCR D I+ +E+AIN G E+ + + TPL+ L+K + +L
Sbjct: 112 EGADSIYIGVVEEDSSGYPDCREDFIQKMESAINAGTKPETDIKIKTPLIHLRKEDIVQL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + LE++ +CY + + C C +C LR KG+ + K
Sbjct: 172 GLSLG------VPLEKTWSCYESEDE-------ACGECDSCRLRLKGFEKAGAK 212
>gi|89894801|ref|YP_518288.1| hypothetical protein DSY2055 [Desulfitobacterium hafniense Y51]
gi|89334249|dbj|BAE83844.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 243
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 117/234 (50%), Gaps = 27/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TC+S A + LSFDYGQR++ ELE V +
Sbjct: 12 KKAVVLLSGGLDSTTCMSVAHKAGYELYPLSFDYGQRHQRELEAAKAVAQ---------Y 62
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ + +G + + + V +D +P T+VP RNI+FL +A +G
Sbjct: 63 YKVKEHRLIKIEHVGGSALTDASIQVPDYTEDGQIPVTYVPARNILFLSYALGYGEVMGA 122
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
I IG+ DYSGYPDCR + ++A + +++G ++ + + PL++L K ET +L
Sbjct: 123 EAIFIGISSVDYSGYPDCRPEFLQAFQKVVDVGTKAGVSGQTIAIKAPLLYLSKAETIQL 182
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A + G L + +CY G C +C +C LR KG+ E K
Sbjct: 183 AAENGA------PLHHTTSCYRGGEK-------ACGTCDSCTLRLKGFAEAGIK 223
>gi|146306313|ref|YP_001186778.1| exsB protein [Pseudomonas mendocina ymp]
gi|189038935|sp|A4XRT0|QUEC_PSEMY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|145574514|gb|ABP84046.1| preQ(0) biosynthesis protein QueC [Pseudomonas mendocina ymp]
Length = 224
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 28/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T ++ A ++SFDYGQR++ EL+ V +++
Sbjct: 4 KKAVILLSGGLDSATVVAMARAEGYACYSMSFDYGQRHRAELQAAERVARQL-------- 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A L
Sbjct: 56 -GVVEHKVVGLNLNG-IGGSALTDSSIAVPETPGEGIPVTYVPARNTVFLSLALGWAEVL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
G +I IGV DYSGYPDCR + + A E NL ++ V + PL + K E
Sbjct: 114 GARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFAIRAPLQQMSKGEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY D G C C +C LR G+
Sbjct: 174 QAGMRLG------VDYALTVSCYQADDD-----GRACGKCDSCRLRAAGFAAAG 216
>gi|330502229|ref|YP_004379098.1| ExsB protein [Pseudomonas mendocina NK-01]
gi|328916515|gb|AEB57346.1| ExsB protein [Pseudomonas mendocina NK-01]
Length = 224
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MND A++L SGG DS+T ++ A ++SFDYGQR++ EL+ V +++
Sbjct: 1 MND-----KKAVILLSGGLDSATVVAMARAEGYACYSMSFDYGQRHRAELQAAERVARQL 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P+T+VP RN +FL
Sbjct: 56 ---------GVVEHKVIGLNLNG-IGGSALTDSSIAVPEAPTEGIPSTYVPARNTVFLAL 105
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A L +I IGV DYSGYPDCR + + A E NL ++ V + PL
Sbjct: 106 ALGWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVQGQSFSIRAPLQ 165
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ K E ++ +G + + +CY D G C C +C LR G++
Sbjct: 166 QMSKAEIIQVGMSLG------VDYALTVSCYQADDD-----GRACGKCDSCRLRAAGFVA 214
Query: 234 FK 235
Sbjct: 215 AG 216
>gi|50085674|ref|YP_047184.1| hypothetical protein ACIAD2601 [Acinetobacter sp. ADP1]
gi|81392613|sp|Q6F9A3|QUEC_ACIAD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|49531650|emb|CAG69362.1| Queuosine biosynthesis protein queC [Acinetobacter sp. ADP1]
Length = 229
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 80/242 (33%), Positives = 115/242 (47%), Gaps = 30/242 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN P A++L SGG DS+TCL+WA R LSF YGQR+ EL+ + +
Sbjct: 1 MNGEFGMRPRAIVLLSGGLDSTTCLAWAQAR-YECMALSFMYGQRSTTELDAAKAIAQ-- 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVF 118
+ G +H + L ++ S+LT N+ + Q +P T+VP RN IFL +
Sbjct: 58 ---------NAGVEHRVINIDLANLGGSALTDHNIDVPEQLQEGIPVTYVPARNTIFLSY 108
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A G IVIGV DYSGYPDCR + I+A L ++ V TPL+
Sbjct: 109 ALAAAEVFGAEAIVIGVNAVDYSGYPDCRPEYIQAFTNMARLATKAGVEGKPLTFETPLL 168
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K +L + G + ++ +CY G C C +C LR++G++E
Sbjct: 169 HLSKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKQGFIE 217
Query: 234 FK 235
Sbjct: 218 AG 219
>gi|110833623|ref|YP_692482.1| exsB protein [Alcanivorax borkumensis SK2]
gi|110646734|emb|CAL16210.1| exsB protein, putative [Alcanivorax borkumensis SK2]
Length = 227
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 114/237 (48%), Gaps = 30/237 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A D+ T++FDYGQR + EL+ V + L
Sbjct: 7 KKAVVLLSGGLDSATCLAIARDQGYACHTIAFDYGQRTRSELDAAERVSGVLGAL----- 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
H + +G+I S+LT + ++++ + + +P T+VP RN +FL A LA
Sbjct: 62 -----SHRVIELGMGNIGGSALTDH-SIEVPENGGDGIPVTYVPARNTVFLSLALGLAEV 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYET 180
+ I IGV DYSGYPDCR I A ++ L ++ V + TPLM L K +
Sbjct: 116 IDAQAIFIGVNAVDYSGYPDCRPAFIEAFQSMATLATKAGVEGRPMQIETPLMHLSKAQI 175
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G L + +CY G C C +C LR +G+ + K
Sbjct: 176 IQRGVALG------LDYGLTVSCYQADDH-----GNACGKCDSCRLRSQGFEDALVK 221
>gi|56963894|ref|YP_175625.1| aluminum resistance protein [Bacillus clausii KSM-K16]
gi|81366060|sp|Q5WG41|QUEC_BACSK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56910137|dbj|BAD64664.1| aluminum resistance protein [Bacillus clausii KSM-K16]
Length = 221
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 131/234 (55%), Gaps = 21/234 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++FSGGQDS+TCL WA +R+ + + FDYGQR+K E++C + +
Sbjct: 3 EDKAVVVFSGGQDSTTCLFWAKERYRSLHAVIFDYGQRHKEEIQCAVDIA---------- 52
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + +L ++ ++LT+ + P+TFV GRN +FL FAA A
Sbjct: 53 NEQGVPYKVFDMGLLNQLTANALTRENISVQAGEAGESPSTFVAGRNHLFLSFAAVYARE 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLMWL K ETW LA
Sbjct: 113 MGAKHIITGVCETDFSGYPDCRDVFVKSLNVTLNLAMDEQFVIHTPLMWLNKKETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G + I ++ TCY G R G GC +CP+C LRQ G + +
Sbjct: 173 KMGQ---LEYIRAKTLTCYEGIR------GDGCGTCPSCQLRQNGLDLYLREKA 217
>gi|24213033|ref|NP_710514.1| PP-loop superfamily ATPase [Leptospira interrogans serovar Lai str.
56601]
gi|45656192|ref|YP_000278.1| hypothetical protein LIC10288 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|81407974|sp|Q72VK9|QUEC_LEPIC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81471975|sp|Q8F964|QUEC_LEPIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24193722|gb|AAN47532.1| PP-loop superfamily ATPase [Leptospira interrogans serovar Lai str.
56601]
gi|45599426|gb|AAS68915.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 242
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 116/241 (48%), Gaps = 32/241 (13%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ A++L SGG DS+TCL A+ ++ LSFDYGQR+K+EL V +K
Sbjct: 19 SKTDSSNNKAVVLLSGGLDSTTCLYQAIADGKEIQALSFDYGQRHKIELSYAKKVTRK-- 76
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLV 117
LG H + SSLT+ ++ +PNT+VPGRNI+FL
Sbjct: 77 ---------LGIPHTIQKLKPELFLGSSLTQKSLHVPKNSLRKEEIPNTYVPGRNILFLS 127
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPL 172
FA +LA G +I IGV DYSGYPDCR + I+ E AI LG + + + TPL
Sbjct: 128 FAVSLAEGTGSDSIYIGVNSMDYSGYPDCRPEFIKMFEMAIQLGTKKGSQGPSIKILTPL 187
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L K E L + + + +CY K G C C AC LR+KG+
Sbjct: 188 QNLSKKEIVLLGNQL------KVPFHLTFSCYDPKN------GKACGKCDACLLRKKGFQ 235
Query: 233 E 233
E
Sbjct: 236 E 236
>gi|224038929|gb|ACN38358.1| transcription regulator related protein [Micromonospora inyonensis]
Length = 236
Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats.
Identities = 81/245 (33%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + A++L SGG DS+T L+ A+ LSF YGQR+ VELE V K +
Sbjct: 1 MWRVPTGKRKAVVLLSGGLDSATVLAMAVHEGYEAHALSFRYGQRHTVELEAAARVAKAL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL----PNTFVPGRNIIFL 116
D + L + G + + T V + + P T+VP RN IFL
Sbjct: 61 GATRHVVAD-------IDLRVFGGSALTDDTLVVPHHASADEMGDEIPVTYVPARNTIFL 113
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHT 170
FA A L ++I IGV DYSGYPDCR + + A ET NL ++ V +HT
Sbjct: 114 SFALAWAETLDASDIFIGVSALDYSGYPDCRPEYVAAYETMANLATKAGVEGRQRLRIHT 173
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
PL+ L K ET + ++G + +H+CY G C +C +C LR +G
Sbjct: 174 PLIQLTKAETIRRGLEMG------VDYAWTHSCYDPVD------GRACGTCDSCLLRGRG 221
Query: 231 WMEFK 235
+ E
Sbjct: 222 FAELG 226
>gi|254787331|ref|YP_003074760.1| ExsB protein [Teredinibacter turnerae T7901]
gi|237683716|gb|ACR10980.1| ExsB protein [Teredinibacter turnerae T7901]
Length = 224
Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 28/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L SGG DS+T L+ A D+ TLSFDYGQR++ EL+ V + +
Sbjct: 1 MSKKAVVLVSGGLDSATVLAMAKDQGYECFTLSFDYGQRHRAELQAAERVAQAMGA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
H + L I S+LT + + + + +P T+VP RN +FL A A
Sbjct: 57 ------AQHKVVSLDLRTIGGSALTDDSISVPEGETSGIPVTYVPARNTVFLSIALGWAE 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
+G I IGV DYSGYPDCR + I+A + +L ++ V + TPL+ L K +
Sbjct: 111 VVGAQAIFIGVNAVDYSGYPDCRPEYIKAYQAMADLATKAGVEGRGVAIKTPLIELSKAD 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ ++ + +CY D G C C +C LR++G+++
Sbjct: 171 IICHGHAL------HVDYALTVSCYQADDD-----GRACGKCDSCRLRRRGFLDAG 215
>gi|119367947|sp|Q0VRI8|QUEC_ALCBS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 222
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 114/237 (48%), Gaps = 30/237 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A D+ T++FDYGQR + EL+ V + L
Sbjct: 2 KKAVVLLSGGLDSATCLAIARDQGYACHTIAFDYGQRTRSELDAAERVSGVLGAL----- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
H + +G+I S+LT + ++++ + + +P T+VP RN +FL A LA
Sbjct: 57 -----SHRVIELGMGNIGGSALTDH-SIEVPENGGDGIPVTYVPARNTVFLSLALGLAEV 110
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYET 180
+ I IGV DYSGYPDCR I A ++ L ++ V + TPLM L K +
Sbjct: 111 IDAQAIFIGVNAVDYSGYPDCRPAFIEAFQSMATLATKAGVEGRPMQIETPLMHLSKAQI 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G L + +CY G C C +C LR +G+ + K
Sbjct: 171 IQRGVALG------LDYGLTVSCYQADDH-----GNACGKCDSCRLRSQGFEDALVK 216
>gi|110816205|sp|Q24VU8|QUEC2_DESHY RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
Length = 233
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 117/234 (50%), Gaps = 27/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TC+S A + LSFDYGQR++ ELE V +
Sbjct: 2 KKAVVLLSGGLDSTTCMSVAHKAGYELYPLSFDYGQRHQRELEAAKAVAQ---------Y 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ + +G + + + V +D +P T+VP RNI+FL +A +G
Sbjct: 53 YKVKEHRLIKIEHVGGSALTDASIQVPDYTEDGQIPVTYVPARNILFLSYALGYGEVMGA 112
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
I IG+ DYSGYPDCR + ++A + +++G ++ + + PL++L K ET +L
Sbjct: 113 EAIFIGISSVDYSGYPDCRPEFLQAFQKVVDVGTKAGVSGQTIAIKAPLLYLSKAETIQL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A + G L + +CY G C +C +C LR KG+ E K
Sbjct: 173 AAENGA------PLHHTTSCYRGGEK-------ACGTCDSCTLRLKGFAEAGIK 213
>gi|330877969|gb|EGH12118.1| exsB protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 221
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 8 MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 67
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 68 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPESPSEGIPITYVPARNTVFLSL 117
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 118 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQ 177
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
L K + K +G + + +CY + G C C +C LR
Sbjct: 178 NLSKSDIVKAGAALG------VDYSLTVSCYQAD-----DQGRACGKCDSCRLRA 221
>gi|240013446|ref|ZP_04720359.1| YbaX [Neisseria gonorrhoeae DGI18]
gi|240080025|ref|ZP_04724568.1| YbaX [Neisseria gonorrhoeae FA19]
gi|240112235|ref|ZP_04726725.1| YbaX [Neisseria gonorrhoeae MS11]
gi|240114978|ref|ZP_04729040.1| YbaX [Neisseria gonorrhoeae PID18]
gi|240120517|ref|ZP_04733479.1| YbaX [Neisseria gonorrhoeae PID24-1]
gi|240125011|ref|ZP_04737897.1| YbaX [Neisseria gonorrhoeae SK-92-679]
gi|240127524|ref|ZP_04740185.1| YbaX [Neisseria gonorrhoeae SK-93-1035]
gi|260441207|ref|ZP_05795023.1| YbaX [Neisseria gonorrhoeae DGI2]
gi|268596169|ref|ZP_06130336.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae FA19]
gi|268598293|ref|ZP_06132460.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae MS11]
gi|268600646|ref|ZP_06134813.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID18]
gi|268683597|ref|ZP_06150459.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
SK-92-679]
gi|268685900|ref|ZP_06152762.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
SK-93-1035]
gi|291044541|ref|ZP_06570250.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|268549957|gb|EEZ44976.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae FA19]
gi|268582424|gb|EEZ47100.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae MS11]
gi|268584777|gb|EEZ49453.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID18]
gi|268623881|gb|EEZ56281.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
SK-92-679]
gi|268626184|gb|EEZ58584.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
SK-93-1035]
gi|291011435|gb|EFE03431.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 219
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 142/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L A++ DN +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNALFLLYAAIFA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E++HTCY G GC CP+C LR++G E E +
Sbjct: 172 ADEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLESKK 217
>gi|254482558|ref|ZP_05095797.1| exsB protein [marine gamma proteobacterium HTCC2148]
gi|214037249|gb|EEB77917.1| exsB protein [marine gamma proteobacterium HTCC2148]
Length = 224
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 77/235 (32%), Positives = 112/235 (47%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T L+ A + TLSFDYGQR++ EL V + ++
Sbjct: 3 EKRAVILVSGGLDSTTVLAMAKAQGYACYTLSFDYGQRHRAELFAAERVSVTLGDV---- 58
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN-VAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYR 125
+H + L I S+LT + + + ++ +P T+VP RN +FL A A
Sbjct: 59 ------EHKVVTLNLDSIGGSALTDSGIPVPEEETEGIPVTYVPARNTVFLSIALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYET 180
LG +I IGV DYSGYPDCR D I A E NL + V +HTPLM + K +
Sbjct: 113 LGAQDIFIGVNAVDYSGYPDCRPDYISAFEVMANLATRAGVEGNRLGIHTPLMEMSKGDI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C AC LR +G+ +
Sbjct: 173 IEAGLALG------VDYALTVSCYQATDE-----GLACGKCDACRLRSQGFRDAG 216
>gi|332709791|ref|ZP_08429748.1| preQ(0) biosynthesis protein QueC [Lyngbya majuscula 3L]
gi|332351389|gb|EGJ30972.1| preQ(0) biosynthesis protein QueC [Lyngbya majuscula 3L]
Length = 228
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 72/241 (29%), Positives = 113/241 (46%), Gaps = 35/241 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++L SGG DS+T L ++ LSFDY QR++ EL+ +
Sbjct: 1 MSKKVIVLLSGGLDSATVLYQSVGDGYECYALSFDYQQRHRRELKSAYAIA--------- 51
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN-------VAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ ++H + L S+LT + +++ +P T+VP RN IFL F
Sbjct: 52 -TAAGVKEHQVVRFDLRQWGGSALTDDNLDLPKERSLEQMSQEIPITYVPARNTIFLSFG 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMW 174
+ A +G + +GV DYSGYPDCR D I+A++TA +LG + + + + TPL+
Sbjct: 111 LSYAEAIGAEGVYVGVNALDYSGYPDCRPDYIKAMQTAFDLGTKQGREGNGIKIFTPLID 170
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LKK E +L +G + E++ +CY G C C AC LR + E
Sbjct: 171 LKKTEIIQLGNQLG------VPWEKTWSCYTGND-------LACGVCDACRLRLAAFAEL 217
Query: 235 K 235
Sbjct: 218 G 218
>gi|41019306|gb|AAR98564.1| GntR [Micromonospora echinospora]
gi|85814031|emb|CAF31447.1| putative gentamicin production protein [Micromonospora echinospora]
Length = 245
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 81/239 (33%), Positives = 113/239 (47%), Gaps = 29/239 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L SGG DS+T L+ A+ LSF YGQR+ VELE V K +
Sbjct: 16 EKRRAVVLLSGGLDSATVLAMAVHEGYEAHALSFRYGQRHTVELEAAARVAKALGATRHV 75
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN----LPNTFVPGRNIIFLVFAATL 122
D + L + G + + T V + +P T+VP RN IFL FA
Sbjct: 76 VAD-------IDLRVFGGSALTDDTLAVPHHDSADELGDEIPVTYVPARNTIFLSFALAW 128
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLK 176
A L ++I IGV DYSGYPDCR + + A ET NL ++ V +HTPL+ L
Sbjct: 129 AETLDASDIFIGVSALDYSGYPDCRPEYVAAYETMANLATKAGVEGRQRLRIHTPLIQLT 188
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K ET + ++G + +H+CY G C SC +C LR +G+ E
Sbjct: 189 KAETIRRGLELG------VDYAWTHSCYDPVD------GRACGSCDSCLLRGRGFAELG 235
>gi|219669238|ref|YP_002459673.1| exsB protein [Desulfitobacterium hafniense DCB-2]
gi|254764332|sp|B8G1I4|QUEC_DESHD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|219539498|gb|ACL21237.1| exsB protein [Desulfitobacterium hafniense DCB-2]
Length = 233
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 117/234 (50%), Gaps = 27/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TC+S A + LSFDYGQR++ ELE V +
Sbjct: 2 KKAVVLLSGGLDSTTCMSVAHKAGYELYPLSFDYGQRHQRELEAAKAVAQ---------Y 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E ++ + +G + + + V +D +P T+VP RNI+FL +A +G
Sbjct: 53 YKVKEHRLIKIEHVGGSALTDASIQVPDYTEDGQIPVTYVPARNILFLSYALGYGEVIGA 112
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
I IG+ DYSGYPDCR + ++A + +++G ++ + + PL++L K ET +L
Sbjct: 113 EAIFIGISSVDYSGYPDCRPEFLQAFQKVVDVGTKAGVSGQTIAIKAPLLYLSKGETIQL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A + G L + +CY G C +C +C LR KG+ E K
Sbjct: 173 AAENGA------PLHHTTSCYRGGEK-------ACGTCDSCTLRLKGFAEAGIK 213
>gi|296122193|ref|YP_003629971.1| exsB protein [Planctomyces limnophilus DSM 3776]
gi|296014533|gb|ADG67772.1| exsB protein [Planctomyces limnophilus DSM 3776]
Length = 244
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 76/250 (30%), Positives = 118/250 (47%), Gaps = 36/250 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K +P ++L SGG DS+T L+ A + +SFDYGQR++ ELE V +
Sbjct: 16 KISPPCVVLVSGGLDSATILAMAKAQGFSPFAISFDYGQRHRFELEAAEKVCQ------- 68
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLVFA 119
+ ++PL + I S+LT N+ + + +P T+VP RN +FL A
Sbjct: 69 --AQGVARHVVIPLD-MRSIGGSALTANIDVPKDRSEAELTSGIPITYVPARNTVFLSIA 125
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMW 174
A +G ++ +GV DYSGYPDCR + + A E NL ++ V +H PL+
Sbjct: 126 LGWAEVIGAQDLFVGVNAVDYSGYPDCRPEFVAAFEKLANLATQTGVEGQPWKIHAPLIH 185
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L K E + +G + +H+CY G C C +C +R+KG++E
Sbjct: 186 LTKAEIIRQGVALG------VDYSLTHSCYD-----PTPTGLSCGHCDSCLIRKKGFLEA 234
Query: 235 ----KEKYQD 240
+Y D
Sbjct: 235 HIPDPTRYAD 244
>gi|256839259|ref|ZP_05544769.1| queuosine biosynthesis protein queC [Parabacteroides sp. D13]
gi|256740178|gb|EEU53502.1| queuosine biosynthesis protein queC [Parabacteroides sp. D13]
Length = 236
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 23/240 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E +
Sbjct: 13 MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA------- 65
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAA 120
D+ +L ++++ + + N ++++ +++ PNTFVPGRN++FL FAA
Sbjct: 66 ---ADANVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 122
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA GI ++V GV E DYSGYPDCR +R++ +NL M+ +HTPLM K E
Sbjct: 123 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 182
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
W+L+ ++G DLV ++ TCY G GC CPAC LR+ G ++ ++ ++
Sbjct: 183 WELSDELGVFDLVR---TQTLTCYNGV------MAEGCGHCPACKLRKDGLEKYLKRKEE 233
>gi|241759321|ref|ZP_04757427.1| ExsB protein [Neisseria flavescens SK114]
gi|241320457|gb|EER56754.1| ExsB protein [Neisseria flavescens SK114]
Length = 219
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 142/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ +ELE + + +
Sbjct: 2 EKQQALVIFSGGQDSTTCLIQAIQTYGCENVQAITFQYGQRHAIELEQARWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A ++ + LPNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMQQITHNALMDDTAYIETAPDGLPNTFVDGRNALFLLYAAIYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
I +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQRIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G ++ I E +HTCY G GC+ CP+C LR++G E+ E +
Sbjct: 172 ADEMGA---LDYICEHTHTCYNGVVG-------GCHECPSCILRERGLSEYLESKK 217
>gi|194097759|ref|YP_002000800.1| YbaX [Neisseria gonorrhoeae NCCP11945]
gi|239998262|ref|ZP_04718186.1| YbaX [Neisseria gonorrhoeae 35/02]
gi|240122816|ref|ZP_04735772.1| YbaX [Neisseria gonorrhoeae PID332]
gi|268594117|ref|ZP_06128284.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 35/02]
gi|268681430|ref|ZP_06148292.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID332]
gi|293397674|ref|ZP_06641880.1| exsB protein [Neisseria gonorrhoeae F62]
gi|254764362|sp|B4RQ61|QUEC_NEIG2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|193933049|gb|ACF28873.1| YbaX [Neisseria gonorrhoeae NCCP11945]
gi|268547506|gb|EEZ42924.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 35/02]
gi|268621714|gb|EEZ54114.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID332]
gi|291611620|gb|EFF40689.1| exsB protein [Neisseria gonorrhoeae F62]
gi|317163544|gb|ADV07085.1| YbaX [Neisseria gonorrhoeae TCDC-NG08107]
Length = 219
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 141/236 (59%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L L+++ I+H++L A++ DN +PNTFV GRN +FL++AA A
Sbjct: 59 -------VSQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNALFLLYAAIFA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E++HTCY G GC CP+C LR++G E E +
Sbjct: 172 ADEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLESKK 217
>gi|32475312|ref|NP_868306.1| transcription regulator [Rhodopirellula baltica SH 1]
gi|81658063|sp|Q7UFU6|QUEC_RHOBA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|32445853|emb|CAD78584.1| probable transcription regulator [Rhodopirellula baltica SH 1]
Length = 250
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 31/241 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A A++L SGG DS+TC++ A D+ V +SF YGQR+ EL+ +
Sbjct: 19 QDAGKAVVLLSGGLDSATCVAIARDQGFEVHAISFRYGQRHDGELDRAAKQASLM----- 73
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDN------NLPNTFVPGRNIIFLVF 118
+ ++ + L + S+L + +A+ D+ ++P T+VP RN IFL +
Sbjct: 74 ----GVVSHRVIDID-LAQLGGSALVDSSIAVPKSDHVDKIAGDIPVTYVPARNTIFLSY 128
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPL 172
A +A LG +I IGV DYSGYPDCR + I A +T L ++ V +HTPL
Sbjct: 129 ALAVAETLGSRDIFIGVNALDYSGYPDCRPEFIDAFQTMARLATKAGVEDEHSLTIHTPL 188
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K E + ++G + ++ +CY + C C AC LR KG+
Sbjct: 189 LHWTKAEIIQRGIELG------VDYSQTLSCY--DPQGSSDEMRPCGQCDACLLRAKGFA 240
Query: 233 E 233
E
Sbjct: 241 E 241
>gi|319790596|ref|YP_004152229.1| exsB protein [Thermovibrio ammonificans HB-1]
gi|317115098|gb|ADU97588.1| exsB protein [Thermovibrio ammonificans HB-1]
Length = 235
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 120/240 (50%), Gaps = 36/240 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+++FSGG DS+T L WA F++V ++F YGQR+ +E+E +K +
Sbjct: 4 AVVIFSGGLDSTTALYWAKRHFEKVYAITFYYGQRHSLEVEFAKITAEK----------A 53
Query: 71 LGEDHILPLAILGDISHSSLTK--------NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++H++ L I S+LT + +I++ +P T+VP RN IF+ AA
Sbjct: 54 NVDEHLIFPVDLSRIGASALTDRSIEVPETSSVEEIKERGIPVTYVPFRNGIFISIAAAY 113
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
A G TN+V G DYSGYPDCR ++A+E A+NLG + +H PL+ L K
Sbjct: 114 AEAKGCTNLVGGWNAVDYSGYPDCRPQFLKAMEEALNLGTKAGAEGKRWHIHAPLINLTK 173
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ KL ++G S +CY G C C +C LR KGW E E+
Sbjct: 174 GQIIKLGLELGA------DYSYSLSCYRGDE-------VPCMKCDSCILRAKGWEEVGEE 220
>gi|319945216|ref|ZP_08019478.1| transcription regulator ExsB [Lautropia mirabilis ATCC 51599]
gi|319741786|gb|EFV94211.1| transcription regulator ExsB [Lautropia mirabilis ATCC 51599]
Length = 228
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 87/237 (36%), Positives = 132/237 (55%), Gaps = 23/237 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ A ++FSGGQDS+TCL AL F VE ++F YGQR+ +EL+ + + +
Sbjct: 1 MSSPQKAAVIFSGGQDSTTCLFLALHEFGPGNVEAITFQYGQRHAIELDKARWIAEDLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ ++ +++ I+H++L A + +D PNTFV GRN +FL++AA
Sbjct: 60 ---------VKQTLIDTSVIKAITHNALLDESATISQEDGQPPNTFVDGRNALFLLYAAI 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A GI + GVCETD+SGYPDCR ++++ +NL M+ + TPLMWL K +TW
Sbjct: 111 HAKAQGIRTLYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYTFDIRTPLMWLTKKDTW 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
LA +G + I + +HTCYLG GC CP+C LR++G E+ +
Sbjct: 171 ALADRLGAF---DYIRQHTHTCYLGVEG-------GCGQCPSCVLRERGLHEYLTER 217
>gi|331007034|ref|ZP_08330268.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC1989]
gi|330419161|gb|EGG93593.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC1989]
Length = 243
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 79/235 (33%), Positives = 113/235 (48%), Gaps = 28/235 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T L+ A + TLSFDYGQR++ EL + K+
Sbjct: 24 RAVILVSGGLDSTTVLAIAQSQGYDCYTLSFDYGQRHRAELVAAERLSLKMGA------- 76
Query: 70 SLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++H + L I S+LT + + +P T+VP RN +FL A A LG
Sbjct: 77 ---KEHKTVILDLRTIGGSALTDDAIDVPESASEGIPVTYVPARNTVFLSIALGWAEVLG 133
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR D I+A E NL + + + TPL+ L K E +
Sbjct: 134 ANDIFIGVNAVDYSGYPDCRLDYIKAYEQMANLATKACVEGRPLRIQTPLIDLSKAEIIR 193
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + E+ +CY D G C C +C LRQ+G+ E +
Sbjct: 194 QGVELG------IDYAETISCYQANAD-----GDACGKCDSCRLRQQGFAEAGTE 237
>gi|327540919|gb|EGF27477.1| trans-regulatory protein ExsB [Rhodopirellula baltica WH47]
Length = 245
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 31/241 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A A++L SGG DS+TC++ A D+ V +SF YGQR+ EL+ +
Sbjct: 14 QDAGKAVVLLSGGLDSATCVAIARDQGFEVHAISFRYGQRHDGELDRAAKQASLM----- 68
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDN------NLPNTFVPGRNIIFLVF 118
+ ++ + L + S+L + +A+ D+ ++P T+VP RN IFL +
Sbjct: 69 ----GVVTHRVIDID-LAQLGGSALVDSSIAVPKSDHVDKIAGDIPVTYVPARNTIFLSY 123
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPL 172
A +A LG +I IGV DYSGYPDCR + I A +T L ++ V +HTPL
Sbjct: 124 ALAVAETLGSRDIFIGVNALDYSGYPDCRPEFINAFQTMARLATKAGVEDEHSLTIHTPL 183
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K E + ++G + ++ +CY C C AC LR KG+
Sbjct: 184 LHWTKAEIIQRGIELG------VDYSQTLSCY--DPQGSNAEMRPCGQCDACLLRAKGFA 235
Query: 233 E 233
E
Sbjct: 236 E 236
>gi|262382273|ref|ZP_06075410.1| exsB protein [Bacteroides sp. 2_1_33B]
gi|262295151|gb|EEY83082.1| exsB protein [Bacteroides sp. 2_1_33B]
Length = 236
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 23/240 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E +
Sbjct: 13 MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA------- 65
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAA 120
D+ +L ++++ + + N ++++ +++ PNTFVPGRN++FL FAA
Sbjct: 66 ---ADADVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 122
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA GI ++V GV E DYSGYPDCR +R++ +NL M+ +HTPLM K E
Sbjct: 123 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 182
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
W+L+ ++G DLV ++ TCY G GC CPAC LR+ G ++ ++ ++
Sbjct: 183 WELSDELGVFDLVR---TQTLTCYNGV------MAEGCGHCPACKLRKDGLEKYLKRKEE 233
>gi|255012284|ref|ZP_05284410.1| putative aluminum resistance protein [Bacteroides sp. 2_1_7]
gi|298374841|ref|ZP_06984799.1| ExsB protein [Bacteroides sp. 3_1_19]
gi|298269209|gb|EFI10864.1| ExsB protein [Bacteroides sp. 3_1_19]
Length = 245
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 23/240 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E +
Sbjct: 22 MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA------- 74
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAA 120
D+ +L ++++ + + N ++++ +++ PNTFVPGRN++FL FAA
Sbjct: 75 ---ADADVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 131
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA GI ++V GV E DYSGYPDCR +R++ +NL M+ +HTPLM K E
Sbjct: 132 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 191
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
W+L+ ++G DLV ++ TCY G GC CPAC LR+ G ++ ++ ++
Sbjct: 192 WELSDELGVFDLVR---TQTLTCYNGV------MAEGCGHCPACKLRKDGLEKYLKRKEE 242
>gi|77460619|ref|YP_350126.1| ExsB [Pseudomonas fluorescens Pf0-1]
gi|110816245|sp|Q3K7W9|QUEC_PSEPF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|77384622|gb|ABA76135.1| preQ(0) biosynthesis protein QueC [Pseudomonas fluorescens Pf0-1]
Length = 230
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 29/243 (11%)
Query: 1 MNDIIK-KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M + + A++L SGG DS+T ++ A T+SFDYGQR+ EL V +
Sbjct: 1 MTEQLNTSQKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRSHAELHAAARVARD 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLV 117
+ + E ++ L + G + S+LT ++ +P T+VP RN +FL
Sbjct: 61 L---------GVVEHKVIGLNLNG-MGGSALTDTSIDIPEELGEGIPVTYVPARNTVFLS 110
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPL 172
A A LG +I IGV DYSGYPDCR + I + E NL + + + PL
Sbjct: 111 LALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFIESFERMANLATKAGVEGNGFRIQAPL 170
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L K + + +G + + +CY D G C C +C LR +G+
Sbjct: 171 QNLSKAQIVQAGVKLG------VDYGLTVSCYQADDD-----GRACGKCDSCRLRAEGFA 219
Query: 233 EFK 235
Sbjct: 220 AAG 222
>gi|240015885|ref|ZP_04722425.1| YbaX [Neisseria gonorrhoeae FA6140]
gi|240117262|ref|ZP_04731324.1| YbaX [Neisseria gonorrhoeae PID1]
gi|268602958|ref|ZP_06137125.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID1]
gi|268587089|gb|EEZ51765.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID1]
Length = 219
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 142/236 (60%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L L+++ I+H++L + A++ DN +PNTFV GRN +FL++AA A
Sbjct: 59 -------VKQTVLDLSLMRQITHNALMDDTAAIETADNGVPNTFVDGRNALFLLYAAIFA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ + TPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIQTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E++HTCY G GC CP+C LR++G E E +
Sbjct: 172 ADEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLESKK 217
>gi|218709345|ref|YP_002416966.1| putative ATPase [Vibrio splendidus LGP32]
gi|218322364|emb|CAV18511.1| predicted ATPase [Vibrio splendidus LGP32]
Length = 197
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 83/202 (41%), Positives = 131/202 (64%), Gaps = 15/202 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+++E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHRLEIEVAESLSKEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -GVKAHKVMDVTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ GVCETD+SGYPDCR+D ++A+ +A+ GM+ + + TPLMWL K ETW LA
Sbjct: 113 IGANTVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDKPLDIKTPLMWLNKAETWALAD 172
Query: 186 DIGGQDLVNLILEESHTCYLGK 207
+ L+ ++ TCY G
Sbjct: 173 QYSA---LELVRNKTLTCYNGI 191
>gi|292490345|ref|YP_003525784.1| exsB protein [Nitrosococcus halophilus Nc4]
gi|291578940|gb|ADE13397.1| exsB protein [Nitrosococcus halophilus Nc4]
Length = 224
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 110/236 (46%), Gaps = 28/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+P A++L SGG DS+T L+ A ++ T+SFDYGQR++VEL+ + + + +
Sbjct: 2 SSPKAVVLVSGGLDSATVLAIAREQEFACYTMSFDYGQRHRVELQAAAEISRLLGAV--- 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+H L LG + S+LT + + +P T+VP RN +FL FA A
Sbjct: 59 -------EHKLITIDLGGMGGSALTDSSIAVPEAPTEAIPVTYVPARNTVFLAFALGWAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKKYE 179
LG +I IGV DYSGYPDCR + A E NL + PL+ L K E
Sbjct: 112 VLGAQDIFIGVNAVDYSGYPDCRPAFVEAFEHLANLATRAGLEGQRFRIQAPLIHLSKAE 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY G C C +C R++G+ E
Sbjct: 172 IIREGIRLG------IDYSRTVSCYQADET-----GRACGVCDSCRFRKQGFQEAG 216
>gi|82703823|ref|YP_413389.1| ExsB [Nitrosospira multiformis ATCC 25196]
gi|110816235|sp|Q2Y5H4|QUEC_NITMU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|82411888|gb|ABB75997.1| preQ(0) biosynthesis protein QueC [Nitrosospira multiformis ATCC
25196]
Length = 232
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 101/230 (43%), Gaps = 23/230 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T L+ A + LS YGQR+ EL + + + K
Sbjct: 3 KAVVLLSGGLDSATVLAIARQQGYECYALSVSYGQRHGAELAAAKNLARSLGATAHKIIQ 62
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ L+ G + + + +P+T+VP RN I L A A LG
Sbjct: 63 -------VDLSTFGGSALIDKEREIPTDGVTPGIPSTYVPARNTIMLSIALAWAEVLGSG 115
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
+I IGV DYSGYPDCR + I A ET N+ ++ + +H PLM L K E K
Sbjct: 116 DIFIGVNAIDYSGYPDCRPEYIEAFETMANVATKAGIEGTRLAIHAPLMNLSKAEIIKRG 175
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+G + + +CY + G C C +C LR+ G+
Sbjct: 176 GVLG------VDYSMTVSCYQAD-----DAGLACGVCDSCRLRRAGFESA 214
>gi|33151752|ref|NP_873105.1| hypothetical protein HD0558 [Haemophilus ducreyi 35000HP]
gi|81423753|sp|Q7VNH6|QUEC_HAEDU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33147973|gb|AAP95494.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 224
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 139/239 (58%), Gaps = 24/239 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK 58
MN + + A+++FSGGQDS+TCL A+ F + VE ++F YGQR+ +ELE + +
Sbjct: 1 MNRSTR-SHKAIVIFSGGQDSTTCLFQAIQEFKRENVEVITFQYGQRHSIELEKAAWIAQ 59
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ + ++ +++ I+ ++L +K QD + PNTFV GRN +FL++
Sbjct: 60 NLG----------IKQTVIDTSVIKAITTNALITEATIK-QDGDKPNTFVDGRNALFLLY 108
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A A GI I GVCETD+SGYPDCR I+++ +NL M+ + + TPLM+L K
Sbjct: 109 TAIYAKGQGIQTIFTGVCETDFSGYPDCRDIFIKSMNVTLNLAMDYNFNIRTPLMYLTKK 168
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+TW LA +G + V E +HTCYLG GC++CP+C LR+KG E+ +
Sbjct: 169 QTWALADQLGAFEYVR---EHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLAE 217
>gi|34498962|ref|NP_903177.1| hypothetical protein CV_3507 [Chromobacterium violaceum ATCC 12472]
gi|81654693|sp|Q7NSB9|QUEC_CHRVO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|34104811|gb|AAQ61168.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 234
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 139/241 (57%), Gaps = 29/241 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRK 58
MN AL++ SGGQDS+TCL WAL RF +VE ++FDYGQR++VEL+C +
Sbjct: 1 MNQA--SDEKALVVLSGGQDSTTCLYWALRRFGAGKVEAVTFDYGQRHRVELDCARKIA- 57
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNII 114
+ +LP+ I ++LT + D+ LPNTFVPGRN++
Sbjct: 58 ---------ALAGVRQTVLPIDTFAAIGGNALTDASIAPEEGVRDDDALPNTFVPGRNLV 108
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
FL FAA AY G ++V GV +TDYSGYPDCR +T++A+E A+ LGM+S V +HTPLM+
Sbjct: 109 FLTFAAAFAYTRGARHLVTGVAQTDYSGYPDCRENTLKALEVALRLGMDSRVELHTPLMY 168
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L K ET LAQ +G + + SHTCY G+ C C +C LR KG+ E
Sbjct: 169 LSKAETVTLAQQVGALEAL----AWSHTCYNGEVPP-------CGHCASCELRAKGFAEA 217
Query: 235 K 235
Sbjct: 218 G 218
>gi|254239324|ref|ZP_04932647.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126171255|gb|EAZ56766.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 224
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++
Sbjct: 3 QKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G + S+LT + +P T+VP RN +FL A A
Sbjct: 56 --GVIEHKVIGLDLNG-MGGSALTDESIAVPESPSEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + A E NL + + + PL +L K +
Sbjct: 113 LDARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++ G + + +CY G C C +C LR G+
Sbjct: 173 IQVGVARG------VDYGLTVSCYQADEQ-----GRACGKCDSCRLRADGFAAAG 216
>gi|254490174|ref|ZP_05103365.1| exsB protein [Methylophaga thiooxidans DMS010]
gi|224464660|gb|EEF80918.1| exsB protein [Methylophaga thiooxydans DMS010]
Length = 223
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 28/236 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A + T+SFDYGQR++ ELE + K +
Sbjct: 2 KRAVILLSGGLDSATVLAIAKSQGYDCYTISFDYGQRHRAELEASARLSKSLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAYRL 126
E ++ + L I S+LT + + + Q + +P T+VP RN +F+ A A L
Sbjct: 56 ---TEHKVINID-LTAIGGSALTDSSIDVPSQHEEGIPITYVPARNTVFMSIALGWAEVL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
I +GV DYSGYPDCR D I A E NL ++ V + TPL+ L K
Sbjct: 112 NAQAIFVGVNAVDYSGYPDCRPDYIAAFEKMANLATKTGVEGLKLTIETPLIDLTKQAII 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G + ++ +CY G C C +C R++G+ + +
Sbjct: 172 EKGIALG------VDYGQTVSCYQADNQ-----GRACGQCDSCRFRKQGFEKAGIE 216
>gi|288957455|ref|YP_003447796.1| queuosine biosynthesis protein [Azospirillum sp. B510]
gi|288909763|dbj|BAI71252.1| queuosine biosynthesis protein [Azospirillum sp. B510]
Length = 242
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 83/245 (33%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T L+ A RV LSF YGQR+ VELE V +
Sbjct: 7 RKDAVVLVSGGLDSTTVLAIAKAEGYRVNALSFRYGQRHSVELEAARRVVAAMG------ 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN----------NLPNTFVPGRNIIFLV 117
E H++ L S+LT +A+ D+ +P T+VP RN +FL
Sbjct: 61 ----VERHVIADIDLRAFGGSALTDAIAVPKHDSAADLEAELGQGIPVTYVPARNTVFLS 116
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTP 171
FA A LG +++ IGV DYSGYPDCR + I A ET NL ++ V +H P
Sbjct: 117 FALAWAETLGASDLFIGVNALDYSGYPDCRPEYIAAFETLANLATKAGVEGGSRFRIHAP 176
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
LM L K + ++G + +H+CY G C +C +C LR KG+
Sbjct: 177 LMTLDKAAIVRRGLELG------VDYSLTHSCYD-----PTPAGLSCGACDSCLLRLKGF 225
Query: 232 MEFKE 236
E
Sbjct: 226 SEAGT 230
>gi|268315893|ref|YP_003289612.1| exsB protein [Rhodothermus marinus DSM 4252]
gi|262333427|gb|ACY47224.1| exsB protein [Rhodothermus marinus DSM 4252]
Length = 238
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 144/239 (60%), Gaps = 19/239 (7%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +AL+L SGGQDS+TCL WAL F +VE L F YGQ++ VELE + +
Sbjct: 11 KPAEHGETALVLLSGGQDSTTCLYWALHYFPKVEALGFHYGQKHAVELEQARKIADRAGV 70
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVF 118
+L L G + S+LT++ A +LP FVPGRN +FL
Sbjct: 71 PF----------TVLDLR--GLLRGSALTEHEQDVSAAHPLAPHLPAAFVPGRNALFLTL 118
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA+ + GI ++V G+C+TDYSGYPDCR + I A+E A++L +++ + +HTPLM L K
Sbjct: 119 AASYGFTRGIHDLVGGMCQTDYSGYPDCRREFIDAMERALSLALDTPIRIHTPLMHLTKA 178
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
ETW+LA+++G ++++I+E +HT Y G R +R+ WGYG PA LR +G+ E K +
Sbjct: 179 ETWRLARELG---ILDVIVELTHTDYNGDRSERHPWGYGRLDNPASILRARGYEEAKAR 234
>gi|302874094|ref|YP_003842727.1| exsB protein [Clostridium cellulovorans 743B]
gi|307689650|ref|ZP_07632096.1| exsB protein [Clostridium cellulovorans 743B]
gi|302576951|gb|ADL50963.1| exsB protein [Clostridium cellulovorans 743B]
Length = 222
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 95/242 (39%), Positives = 145/242 (59%), Gaps = 23/242 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ +K+ L++ SGGQDS+TCL WA+ F V+ + F+YGQR+++EL+C +KI
Sbjct: 1 MSSSLKEQD-ILVVLSGGQDSTTCLFWAIKNFRNVKAIGFNYGQRHELELQCA----RKI 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLV 117
E ++ +L + +L ++ +SLT+ V + + PN+ V GRN+IFL
Sbjct: 56 CE------ENNVSYEVLDMGLLNQLTTNSLTRKDIEVQAAKEGESTPNSLVEGRNMIFLT 109
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
FAA A I +IV GV ++D+SGYPDCR I+++ +NL M+ +HTPLMWL K
Sbjct: 110 FAAVYAKTHNIKHIVTGVSQSDFSGYPDCRDTFIKSLNVTLNLSMDYEYVIHTPLMWLDK 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+TWKL+ D+G +++ I + + TCY G G GC CP+C LR +G EF +K
Sbjct: 170 CDTWKLSDDLG---VLDTIKDRTLTCYNGI------IGAGCGICPSCLLRARGLEEFYKK 220
Query: 238 YQ 239
Y+
Sbjct: 221 YR 222
>gi|325267556|ref|ZP_08134208.1| transcription regulator ExsB [Kingella denitrificans ATCC 33394]
gi|324980906|gb|EGC16566.1| transcription regulator ExsB [Kingella denitrificans ATCC 33394]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 140/230 (60%), Gaps = 23/230 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL++FSGGQDS+TCL A+ ++ + V+ ++F YGQR+ +ELE + +++
Sbjct: 4 ALVVFSGGQDSTTCLFQAMQQYGAENVQAITFAYGQRHGIELERAASIAQELG------- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+L L+++ I+H++LT A++ +PNTFV GRN +FL++AA A
Sbjct: 57 ---IRQTVLDLSLITAITHNALTDAQAAIETDAQGMPNTFVDGRNALFLLYAAIYAKSQN 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I +I IGVCETD+SGYPDCR ++++ +NL M +HTPLM+L K ETW LA ++
Sbjct: 114 IRDIFIGVCETDFSGYPDCRQIFVQSMNVTLNLAMAYDFRLHTPLMYLTKKETWALADEL 173
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G +++ I +HTCYLG GC+ CP+C LR++G E+ +
Sbjct: 174 G---VLDYIRTRTHTCYLGVDG-------GCHECPSCVLRERGLAEYLAE 213
>gi|238023182|ref|ZP_04603608.1| hypothetical protein GCWU000324_03108 [Kingella oralis ATCC 51147]
gi|237865565|gb|EEP66705.1| hypothetical protein GCWU000324_03108 [Kingella oralis ATCC 51147]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 134/234 (57%), Gaps = 22/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+AL++FSGGQDS+TCL A+ V+T+SF YGQR+ VEL+ + + +
Sbjct: 2 SPNTALVIFSGGQDSTTCLFQAIADCGAGNVQTISFQYGQRHAVELQRAAWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L L+ +G+I+H++L + A Q N PNTFV GRN +FL++AA A
Sbjct: 59 -------VPHTVLDLSAIGNITHNALMDSSAPIQQAGNTPNTFVDGRNALFLLYAAIHAK 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI I GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K +TW LA
Sbjct: 112 AQGIHRIYTGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPFDIRTPLMWLTKKQTWALA 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G + I +HTCY+G GC+ CPAC LR++G E+ +
Sbjct: 172 DQLGAF---DYIRAHTHTCYMGVAG-------GCHQCPACILRERGLREYLAER 215
>gi|282898901|ref|ZP_06306885.1| ExsB [Cylindrospermopsis raciborskii CS-505]
gi|281196212|gb|EFA71125.1| ExsB [Cylindrospermopsis raciborskii CS-505]
Length = 222
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 70/240 (29%), Positives = 104/240 (43%), Gaps = 35/240 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A +SFDY QR++ EL+ + + + + +
Sbjct: 2 KAVILLSGGLDSSTVLYQARADGYECYAISFDYHQRHRRELQSAMSIAQSLGVV------ 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+H L S+LT N + ++P T+VP RN IFL F
Sbjct: 56 ----EHQQVTFDLRSWGGSALTDNSIPVPHNRPLDQMSESIPITYVPARNTIFLSFGLAY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKK 177
A + + IGV DYSGYPDCR D I A++ LG + + + PL+ L K
Sbjct: 112 AEAIRAERVYIGVNALDYSGYPDCRPDYIHAMQEVFRLGTKQGREGKPIDIIAPLINLTK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +L +G + E + +CY G + C C +C LR + E K
Sbjct: 172 TQIIQLGNRLG------VPWELTWSCYSGGE-------HPCGVCDSCQLRWAAFHELGLK 218
>gi|85813930|emb|CAF31559.1| putative fortimicin production protein; unknown ATP/GTP-binding
protein [Micromonospora olivasterospora]
Length = 233
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 78/239 (32%), Positives = 113/239 (47%), Gaps = 29/239 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L SGG DS+T L+ A+ LSF YGQR+ VEL+ V K +
Sbjct: 4 EKRKAVVLLSGGLDSATVLAMAVHEGYEAHALSFRYGQRHTVELKAAARVAKALGATRHV 63
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATL 122
D + L + G + + + V + ++P T+VP RN IFL FA
Sbjct: 64 VAD-------IDLRVFGGSALTDDSLAVPHHASADELGGDIPVTYVPARNTIFLSFALAW 116
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLK 176
A L ++I IGV DYSGYPDCR + I A E NL ++ V +HTPL+ L
Sbjct: 117 AETLDASDIFIGVSALDYSGYPDCRPEYIAAYEAMANLATKAGVEGRQRLRIHTPLIQLT 176
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K ET + ++G + +H+CY G C +C +C LR +G+ E
Sbjct: 177 KAETIRRGLELG------VDYAWTHSCYDPVD------GRACGTCDSCLLRGRGFAELG 223
>gi|113475545|ref|YP_721606.1| exsB protein [Trichodesmium erythraeum IMS101]
gi|123056780|sp|Q114E1|QUEC_TRIEI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110166593|gb|ABG51133.1| exsB protein [Trichodesmium erythraeum IMS101]
Length = 222
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 105/238 (44%), Gaps = 35/238 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A +SFDY QR+ EL+ + +
Sbjct: 2 KAVILLSGGLDSSTVLYQAKADGCECYAISFDYQQRHLRELDSAKKIADTV--------- 52
Query: 70 SLGEDHILPLAILGDISHSSLTK-------NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ E HI+ L S+LT + ++ N+P T+VP RN IFL FA
Sbjct: 53 GVIEHHIVSFD-LRSWGGSALTDSQIDLPSDRDLEEMSQNIPITYVPARNTIFLSFALAY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKK 177
A + + + IGV DYSGYPDCR D I A++ LG + + PL+ +KK
Sbjct: 112 AEVVNASRVYIGVNALDYSGYPDCRPDYILAMQEVFRLGTRQGREGEAIAIVAPLIEMKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E +L +G + E++ +CY G C C +C LR + E
Sbjct: 172 TEIIQLGNSLG------VPWEKTWSCYAGGEKP-------CGICDSCKLRLTAFQELG 216
>gi|254493040|ref|ZP_05106211.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 1291]
gi|226512080|gb|EEH61425.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 1291]
Length = 219
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 140/236 (59%), Gaps = 23/236 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L L+++ I+H++L A++ DN +PNTFV GRN +FL++AA A
Sbjct: 59 -------VSQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNALFLLYAAIFA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +I+ GVCETD+SGYPDCR ++++ +NL M+ + TPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIQTPLMYLTKAQTWAL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
A ++G +++ I E++HTCY G GC CP+C LR++G E E +
Sbjct: 172 ADEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLESKK 217
>gi|224372822|ref|YP_002607194.1| ExsB protein [Nautilia profundicola AmH]
gi|254764361|sp|B9L986|QUEC_NAUPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|223588633|gb|ACM92369.1| ExsB protein [Nautilia profundicola AmH]
Length = 222
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 26/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++ SGG DS+T A + + F+Y QR + L I + +
Sbjct: 2 KKAVVILSGGMDSTTAAFIAKSEGYEIIPVHFNYSQRTEK---RELKAFNDICDYL---- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+L +I+ + I S+L +V + +P T+VP RN IFL AA +A +
Sbjct: 55 -NLDNRYIIDIPFFKQIGASALVDENIDVPVDGVKPGIPVTYVPFRNGIFLSIAAAVAEK 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
G I IGV E D SGYPDC D I+ ++ A+N G E+++ + TPL+ LKK + K
Sbjct: 114 EGAEAIYIGVVEEDSSGYPDCTEDFIQNMQKAVNSGTKPETNIEIKTPLVHLKKEDIVKT 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A N+ L + +CY + + C C +C LR KG+ + +
Sbjct: 174 AVKY------NVPLHLTWSCYKNEDE-------ACGVCDSCRLRLKGFEKAGIE 214
>gi|150010472|ref|YP_001305215.1| putative aluminum resistance protein [Parabacteroides distasonis
ATCC 8503]
gi|301311850|ref|ZP_07217772.1| ExsB protein [Bacteroides sp. 20_3]
gi|189038930|sp|A6LIS9|QUEC_PARD8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|149938896|gb|ABR45593.1| putative aluminum resistance protein [Parabacteroides distasonis
ATCC 8503]
gi|300829952|gb|EFK60600.1| ExsB protein [Bacteroides sp. 20_3]
Length = 224
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 23/240 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K+ +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E +
Sbjct: 1 MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA------- 53
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAA 120
D+ +L ++++ + + N ++++ +++ PNTFVPGRN++FL FAA
Sbjct: 54 ---ADADVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA GI ++V GV E DYSGYPDCR +R++ +NL M+ +HTPLM K E
Sbjct: 111 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
W+L+ ++G DLV ++ TCY G GC CPAC LR+ G ++ ++ ++
Sbjct: 171 WELSDELGVFDLVR---TQTLTCYNGV------MAEGCGHCPACKLRKDGLEKYLKRKEE 221
>gi|308273460|emb|CBX30062.1| Queuosine biosynthesis protein queC [uncultured Desulfobacterium
sp.]
Length = 230
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 33/243 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T ++ A + ++SF YGQR+ EL KK+ E+
Sbjct: 1 MQKKAIVLLSGGLDSTTVMAIAKHEGFDLYSMSFFYGQRHSHELNAA----KKVSEVFNV 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLVFAA 120
+ H++ L I S+LT ++ + + +P T+VP RN IFL A
Sbjct: 57 ------KKHLVINIDLNKIGGSALTADIKVPKARSLNSINKGIPVTYVPARNTIFLAHAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMW 174
A + +I IGV D+SGYPDCR + I A E NL ++ V + TPL+
Sbjct: 111 AWAEVIKSFDIFIGVNAIDFSGYPDCRPEFISAFEYMANLATKAGVEGKMRLKIRTPLIN 170
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ K + K ++G + +H+CY D G C+ C +C+LR+KG+ E
Sbjct: 171 MTKAQIIKKGIELG------VDYSLTHSCYDPGPD-----GSACSLCDSCFLRKKGFEEA 219
Query: 235 KEK 237
K
Sbjct: 220 GLK 222
>gi|104783063|ref|YP_609561.1| hypothetical protein PSEEN4083 [Pseudomonas entomophila L48]
gi|122402284|sp|Q1I6F8|QUEC_PSEE4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|95112050|emb|CAK16777.1| conserved hypothetical protein; ExsB protein [Pseudomonas
entomophila L48]
Length = 224
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 4 KRAVILLSGGLDSATVVAMAKAEGYACYTMSFDYGQRHRAELDAAARVARDL-------- 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E ++ L + G I S+LT N + +P T+VP RN +FL A A L
Sbjct: 56 -GVVEHKVIGLNLNG-IGGSALTDNSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEVL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
+I IGV DYSGYPDCR + + A E NL ++ V + PL L K +
Sbjct: 114 EARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNLSKAQIV 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G + + +CY + G C C +C LR G+
Sbjct: 174 QAGIAQG------VDYSLTVSCYQADDE-----GRACGKCDSCRLRADGFKAAG 216
>gi|53804444|ref|YP_113697.1| exsB protein [Methylococcus capsulatus str. Bath]
gi|81682290|sp|Q609K0|QUEC_METCA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|53758205|gb|AAU92496.1| exsB protein [Methylococcus capsulatus str. Bath]
Length = 223
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 107/234 (45%), Gaps = 28/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A +SFDYGQR+ EL+ + + + +
Sbjct: 2 KPAVVLLSGGLDSATTLAIARREGFACHAMSFDYGQRHGAELKAARRLAQSLGAI----- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTK--NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+H L I S+LT N +P T+VP RN +FL FA A L
Sbjct: 57 -----EHKTVHIGLDAIGGSALTDLRIAVPDHPQNGIPVTYVPARNTVFLSFALGWAEVL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
G +I IGV DYSGYPDCR + IRA E NL + +HTPL+ L K +
Sbjct: 112 GALDIFIGVNAVDYSGYPDCRPEFIRAFEQLANLATKVGVEGGRFRIHTPLIDLSKADII 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C +C LR++G+ +
Sbjct: 172 RTGTALG------IDYAMTVSCYAADAE-----GLACGVCDSCRLRRQGFEQAG 214
>gi|298492860|ref|YP_003723037.1| exsB protein ['Nostoc azollae' 0708]
gi|298234778|gb|ADI65914.1| exsB protein ['Nostoc azollae' 0708]
Length = 224
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 105/238 (44%), Gaps = 35/238 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A +SFDY Q++ EL+ + V K + +
Sbjct: 2 KAVILLSGGLDSSTVLYQARADGCECYAISFDYQQQHCRELQSAVLVGKSVGVV------ 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
H + L S+LT + ++ N+P T+VP RN IFL FA
Sbjct: 56 ----QHQVVNFDLRLWGGSALTDDAIALPQARSLDEMSQNIPVTYVPARNTIFLSFALGY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKK 177
A + + IGV DYSGYPDCR D I+A++ LG + + + PL+ LKK
Sbjct: 112 AEVIAAERVYIGVNALDYSGYPDCRPDYIQAMQEVFRLGTKQGREGQPINIIAPLVNLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E +L +G + E + +CY G C C +C LR + E
Sbjct: 172 TEIIQLGNQLG------VPWELTWSCYAGGDK-------ACGVCDSCRLRLAAFAELG 216
>gi|167035185|ref|YP_001670416.1| exsB protein [Pseudomonas putida GB-1]
gi|189038937|sp|B0KTI3|QUEC_PSEPG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|166861673|gb|ABZ00081.1| exsB protein [Pseudomonas putida GB-1]
Length = 228
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T ++ A T+SFDYGQR++ EL V + +
Sbjct: 4 KRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDL-------- 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A L
Sbjct: 56 -GVVEHKVIGLNLDG-IGGSALTDSNIDVPEAPSEGIPVTYVPARNTVFLSLALGWAEVL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
+I IGV DYSGYPDCR + + A E NL ++ V + PL + K +
Sbjct: 114 EARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIV 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G + + +CY D G C C +C LR G+
Sbjct: 174 QAGMARG------VDYSLTVSCYQADDD-----GRACGKCDSCRLRADGFKAAG 216
>gi|170723150|ref|YP_001750838.1| exsB protein [Pseudomonas putida W619]
gi|254764369|sp|B1JD61|QUEC_PSEPW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169761153|gb|ACA74469.1| exsB protein [Pseudomonas putida W619]
Length = 224
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A T+SFDYGQR++ EL V + +
Sbjct: 3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A
Sbjct: 56 --GVVEHKVIGLNLDG-IGGSALTDSSIDVPETPGEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + A E NL ++ V + PL + K +
Sbjct: 113 LQARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G + + +CY + G C C +C LR G+
Sbjct: 173 VQAGMARG------VDYSLTVSCYQADDE-----GRACGKCDSCRLRADGFKAAG 216
>gi|329893689|ref|ZP_08269823.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC3088]
gi|328923616|gb|EGG30928.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC3088]
Length = 231
Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats.
Identities = 76/242 (31%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN P A++L SGG DS+T L+ A + TLSFDYGQR++ EL +
Sbjct: 1 MNQDANALPKAVILVSGGLDSATVLAMAHAQGFECYTLSFDYGQRHRAELIAAERISAGY 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVF 118
++ H + L I S+LT + +P T+VP RN IFL
Sbjct: 61 PDVT----------HKVVTLNLDSIGGSALTDTAIAVPESPTEGIPITYVPARNTIFLSI 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLM 173
A A LG +I IGV DYSGYPDCR + I A E+ N+ + +H+ + PL
Sbjct: 111 ALGWAEVLGALDIFIGVNAVDYSGYPDCRPEFISAYESLANVATKAGVEGNHLRIQAPLS 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K E + +G + + +CY G C C +C LR++G+
Sbjct: 171 NLSKAEIIQQGSQLG------VDYSATVSCYQADNQ-----GRACGLCDSCRLRKEGFES 219
Query: 234 FK 235
Sbjct: 220 AG 221
>gi|190575558|ref|YP_001973403.1| putative transcriptional regulator [Stenotrophomonas maltophilia
K279a]
gi|254764387|sp|B2FRM5|QUEC_STRMK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|190013480|emb|CAQ47115.1| putative transcriptional regulator [Stenotrophomonas maltophilia
K279a]
Length = 221
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V K
Sbjct: 2 KKAVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELDAAARVAK---------A 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ I+ + L I S+LT ++ + +P T+VP RN I L A A LG
Sbjct: 53 QGVVAHKIVDVD-LRSIGGSALTDDIDVPEAGGAGIPVTYVPARNTIMLSLALGWAEVLG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
+I GV DYSGYPDCR + + A + NL + + + VH PL +L K +
Sbjct: 112 ANDIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIKVHAPLQFLSKGQIVS 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY G C C AC LR +G+ E
Sbjct: 172 EGVRLG------VDFGLTVSCYNAD-----ANGAACGHCDACRLRAQGFAEAG 213
>gi|49081904|gb|AAT50352.1| PA0976 [synthetic construct]
Length = 225
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++
Sbjct: 3 QKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G + S+LT + +P T+VP RN +FL A A
Sbjct: 56 --GVIEHKVIGLDLNG-MGGSALTDESIAVPESPSEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + A E NL + + + PL +L K +
Sbjct: 113 LDARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G + + +CY G C C +C LR G+
Sbjct: 173 IQAGVARG------VDYGLTVSCYQADEQ-----GRACGKCDSCRLRADGFAAAG 216
>gi|15596173|ref|NP_249667.1| hypothetical protein PA0976 [Pseudomonas aeruginosa PAO1]
gi|107100432|ref|ZP_01364350.1| hypothetical protein PaerPA_01001457 [Pseudomonas aeruginosa PACS2]
gi|116048901|ref|YP_792298.1| hypothetical protein PA14_51670 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893053|ref|YP_002441922.1| hypothetical protein PLES_43381 [Pseudomonas aeruginosa LESB58]
gi|254245259|ref|ZP_04938581.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296390665|ref|ZP_06880140.1| hypothetical protein PaerPAb_21028 [Pseudomonas aeruginosa PAb1]
gi|81541661|sp|Q9I4Z2|QUEC_PSEAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|122258008|sp|Q02ID8|QUEC_PSEAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764368|sp|B7UXV6|QUEC_PSEA8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|9946884|gb|AAG04365.1|AE004531_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|32454317|gb|AAP82946.1| conserved hypothetical protein [Pseudomonas aeruginosa PA14]
gi|115584122|gb|ABJ10137.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198637|gb|EAZ62700.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218773281|emb|CAW29093.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
Length = 224
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++
Sbjct: 3 QKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G + S+LT + +P T+VP RN +FL A A
Sbjct: 56 --GVIEHKVIGLDLNG-MGGSALTDESIAVPESPSEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + A E NL + + + PL +L K +
Sbjct: 113 LDARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G + + +CY G C C +C LR G+
Sbjct: 173 IQAGVARG------VDYGLTVSCYQADEQ-----GRACGKCDSCRLRADGFAAAG 216
>gi|59800588|ref|YP_207300.1| YbaX [Neisseria gonorrhoeae FA 1090]
gi|75356427|sp|Q5FA99|QUEC_NEIG1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|59717483|gb|AAW88888.1| putative aluminum resistance protein [Neisseria gonorrhoeae FA
1090]
Length = 224
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 92/241 (38%), Positives = 141/241 (58%), Gaps = 28/241 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL++FSGGQDS+TCL A+ + + V+ ++F YGQR+ VELE + + +
Sbjct: 2 SNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLG--- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN------VAMKIQDNNLPNTFVPGRNIIFLVF 118
+L L+++ I+H++L A++ DN +PNTFV GRN +FL++
Sbjct: 59 -------VSQTVLDLSLMRQITHNALMDETAAIETAAIETADNGVPNTFVDGRNALFLLY 111
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA A GI +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K
Sbjct: 112 AAIFAKGQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPLMYLTKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+TW LA ++G +++ I E++HTCY G GC CP+C LR++G E E
Sbjct: 172 QTWALADEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAECLESK 221
Query: 239 Q 239
+
Sbjct: 222 K 222
>gi|148546498|ref|YP_001266600.1| exsB protein [Pseudomonas putida F1]
gi|189038936|sp|A5VZV6|QUEC_PSEP1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148510556|gb|ABQ77416.1| exsB protein [Pseudomonas putida F1]
Length = 224
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A T+SFDYGQR++ EL V +
Sbjct: 3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVAHDL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A
Sbjct: 56 --GVVEHKVIGLNLDG-IGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + A E NL ++ V + PL + K +
Sbjct: 113 LEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ G + + +CY D G C C +C LR G+ +
Sbjct: 173 VQAGMARG------VDYSLTVSCYQADDD-----GRACGKCDSCRLRADGFKAAGIE 218
>gi|288942464|ref|YP_003444704.1| exsB protein [Allochromatium vinosum DSM 180]
gi|288897836|gb|ADC63672.1| exsB protein [Allochromatium vinosum DSM 180]
Length = 232
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 111/239 (46%), Gaps = 33/239 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A LSF YGQR+ VELE V + +
Sbjct: 2 KPAVVLLSGGLDSTTALAIARAEGFVPHALSFRYGQRHAVELEAAARVAESMG------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAATL 122
+H++ L S+LT ++A+ ++++P T+VP RN +FL FA
Sbjct: 55 ---VTEHVIAEIDLRRFGGSALTADLAVPKGRDPREMESDIPVTYVPARNTVFLSFALAW 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLK 176
A L ++I IGV DYSGYPDCR + I A E NL + V +H PL+ +
Sbjct: 112 AEVLEASDIFIGVNALDYSGYPDCRPEYIAAFEQLANLATAAGVEGRQRYRIHAPLIEMS 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E + +G + + +CY G C +C +C LR KG+ E
Sbjct: 172 KAEIIRTGLALG------VDYGLTSSCYDPG-----SGGRPCGACDSCQLRAKGFAEAG 219
>gi|26987961|ref|NP_743386.1| exsB protein [Pseudomonas putida KT2440]
gi|75489508|sp|Q9WWW8|QUEC_PSEPU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81441873|sp|Q88NI3|QUEC_PSEPK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|24982674|gb|AAN66850.1|AE016313_9 exsB protein [Pseudomonas putida KT2440]
gi|5514781|emb|CAB50783.1| hypothetical protein [Pseudomonas putida]
gi|313497578|gb|ADR58944.1| ExsB [Pseudomonas putida BIRD-1]
Length = 224
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A T+SFDYGQR++ EL V + +
Sbjct: 3 EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A
Sbjct: 56 --GVVEHKVIGLNLDG-IGGSALTDSSIDVPEAPGEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + A E NL ++ V + PL + K +
Sbjct: 113 LEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ G + + +CY D G C C +C LR G+ +
Sbjct: 173 VQAGMARG------VDYSLTVSCYQADDD-----GRACGKCDSCRLRADGFKAAGIE 218
>gi|329119474|ref|ZP_08248159.1| transcription regulator ExsB [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464407|gb|EGF10707.1| transcription regulator ExsB [Neisseria bacilliformis ATCC
BAA-1200]
Length = 384
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 142/235 (60%), Gaps = 23/235 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ AL++FSGGQDS+TCL A+ + + V+T+SF YGQR+ VELE + +
Sbjct: 3 SEKALVIFSGGQDSTTCLIQAIQTYGRENVQTISFQYGQRHAVELERARSIAQ------- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
D + IL L+++ I+ ++LT N A++ N LPNTFV GRN +FL++AA A
Sbjct: 56 ---DWGVKQTILDLSLIKHITQNALTDNTAAIQTAANGLPNTFVDGRNALFLLYAAICAK 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
I +I+ GVCETD+SGYPDCR ++++ +NL M+ +HTPLM+L K +TW+LA
Sbjct: 113 GQNIRHIITGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYPFQIHTPLMYLTKAQTWELA 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G ++ I + +HTCY G GC+ CPAC LR++G ++ +
Sbjct: 173 DKLG---CLDYIRDHTHTCYNGVIG-------GCHQCPACQLRERGLAQYLQNKA 217
>gi|255320800|ref|ZP_05361975.1| ExsB protein [Acinetobacter radioresistens SK82]
gi|262379424|ref|ZP_06072580.1| queuosine biosynthesis protein queC [Acinetobacter radioresistens
SH164]
gi|255302177|gb|EET81419.1| ExsB protein [Acinetobacter radioresistens SK82]
gi|262298881|gb|EEY86794.1| queuosine biosynthesis protein queC [Acinetobacter radioresistens
SH164]
Length = 222
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 30/238 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+TCL+WA R +SF YGQR+ EL+ + ++
Sbjct: 1 MRSRAIVLLSGGLDSTTCLAWAQAR-YECIAISFMYGQRSTTELDAAKALTQR------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAY 124
G +H + LG++ S+LT N+ + +Q+ + +P T+VP RN IFL +A A
Sbjct: 53 ----AGVEHRVINIDLGNLGGSALTDHNIDVPVQEQSGIPVTYVPARNTIFLSYALAAAE 108
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
IVIG+ DYSGYPDCR + I A L + + TPL+ L K
Sbjct: 109 VFDAEAIVIGINAVDYSGYPDCRPEFIEAFANMARLATKVGVEGKPLKFETPLLHLSKAN 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+L + G + ++ +CY + G C C +C LR++G+ E +
Sbjct: 169 IIRLGIEHG------VDYSQTVSCYQAD-----DQGRACGQCDSCRLRKQGFQEAGIE 215
>gi|302558409|ref|ZP_07310751.1| exsB protein [Streptomyces griseoflavus Tu4000]
gi|302476027|gb|EFL39120.1| exsB protein [Streptomyces griseoflavus Tu4000]
Length = 231
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 34/242 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A D+ LSF YGQR+ +ELE V +
Sbjct: 1 MDRPAIVLLSGGLDSTTVLAIAKDQGFTPYALSFRYGQRHSIELEAAKRVAE-------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK-------IQDNNLPNTFVPGRNIIFLVFA 119
H++ L S+LT ++ + ++D +P T+VP RN IFL FA
Sbjct: 53 --VQGVARHVIADIDLRVFGGSALTADIEVPKHESLDDVEDGGVPITYVPARNTIFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLM 173
A +G ++I GV DYSGYPDCR + + A T NL + V +H+PL+
Sbjct: 111 LAFAETVGASDIFTGVTAVDYSGYPDCRPEYMDAFATMANLATRAGVEGISRMTLHSPLI 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ K + + +G + + +CY + G C C C LR KG+ E
Sbjct: 171 AMSKADIVREGLRLG------VDYSLTSSCYNPD-----DQGQACGKCDTCLLRLKGFAE 219
Query: 234 FK 235
Sbjct: 220 AG 221
>gi|284028808|ref|YP_003378739.1| exsB protein [Kribbella flavida DSM 17836]
gi|283808101|gb|ADB29940.1| exsB protein [Kribbella flavida DSM 17836]
Length = 235
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M K A++L SGG DS+T L+ A LSF YGQR+ VEL V +
Sbjct: 1 MEVEEKMDRPAVVLLSGGLDSTTVLAIARSEGFTPYALSFRYGQRHVVELAAATRVAEA- 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNII 114
H++ L S+LT ++ + D+ ++P T+VP RN I
Sbjct: 60 ---------QGVARHVIADIDLRVFGGSALTSDIDVPKHDDVSDVDESIPLTYVPARNTI 110
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVH 169
FL FA A +G ++ IGV DYSGYPDCR + I A E NL + V +H
Sbjct: 111 FLSFALAYAETVGAIDVFIGVSALDYSGYPDCRPEYIEAYEAMANLATRAGVDGHRLKIH 170
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
TPL+ + K +T +L +G + + +CY D G C C +C LR+K
Sbjct: 171 TPLIEMTKGQTVELGLKLG------VDYALTSSCYDPDLD-----GRPCGHCDSCLLRRK 219
Query: 230 GWMEFKEK 237
G+ E +
Sbjct: 220 GFAEAGSE 227
>gi|71909651|ref|YP_287238.1| ExsB [Dechloromonas aromatica RCB]
gi|110816224|sp|Q478G3|QUEC_DECAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|71849272|gb|AAZ48768.1| preQ(0) biosynthesis protein QueC [Dechloromonas aromatica RCB]
Length = 225
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 104/237 (43%), Gaps = 29/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+TCL+ A + LSF+YGQR+ EL V K +
Sbjct: 1 MMKKAVVLLSGGLDSATCLAIARSQGFESYCLSFNYGQRHCAELVAADRVVKALGA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
E +L L S+LT V + +P T+VP RN I L A A
Sbjct: 57 -----AEHRVLNFG-LAQFGGSALTDTNIAVPTEGVQPGIPVTYVPARNTIMLSLALAWA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY 178
LG +I +GV DYSGYPDCR + I A ET NL ++ V +H PL+ L K
Sbjct: 111 EVLGSRDIFVGVNAVDYSGYPDCRPEYIAAFETMANLATKAGVEGHKLSIHAPLIDLSKA 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + +G + + +CY G C C +C LR +G+
Sbjct: 171 EIIRTGAALG------VDYSLTVSCYQADEQ-----GRACGVCDSCRLRAEGFAAAG 216
>gi|152985628|ref|YP_001349881.1| hypothetical protein PSPA7_4532 [Pseudomonas aeruginosa PA7]
gi|189038934|sp|A6V9Z6|QUEC_PSEA7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|150960786|gb|ABR82811.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 224
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++ +
Sbjct: 3 QKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGAI---- 58
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E ++ L + G + S+LT + + +P T+VP RN +FL A A
Sbjct: 59 -----EHKVIGLDLNG-MGGSALTDDSIAVPEAPSQGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + A E NL + + + PL +L K +
Sbjct: 113 LEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G + + +CY + G C C +C LR G+
Sbjct: 173 IQAGVARG------VDYGLTVSCYQAD-----DQGRACGKCDSCRLRADGFAAAG 216
>gi|261855157|ref|YP_003262440.1| exsB protein [Halothiobacillus neapolitanus c2]
gi|261835626|gb|ACX95393.1| exsB protein [Halothiobacillus neapolitanus c2]
Length = 235
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 77/244 (31%), Positives = 112/244 (45%), Gaps = 33/244 (13%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D P A++L SGG DS+T + A +V +SFDYGQR+KVEL+ V ++
Sbjct: 4 DTENTQPKAVVLLSGGLDSATVAAIAKSDGYQVHAVSFDYGQRHKVELKAAYRVALQLG- 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFL 116
+ H + L D+ S+LT + A+ + D ++P T+VP RN+ FL
Sbjct: 63 ---------IQHHKMISINLNDVGGSALT-DSALAVPDYDAQSAEHIPITYVPARNLTFL 112
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTP 171
A A LG I IGV DYSGYPDCR + I+ E NL + + P
Sbjct: 113 SLALGWAEILGARRIYIGVNAVDYSGYPDCRPEFIKQFEVTANLATAAGLTGEPFKIIAP 172
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L L K E + G + ++ +CY G C C AC+ R++G+
Sbjct: 173 LQTLTKAEIIQWGTRFG------VDYAQTISCYNPDEQ-----GRACGRCDACHYRKQGF 221
Query: 232 MEFK 235
M+
Sbjct: 222 MDAG 225
>gi|56476932|ref|YP_158521.1| ExsB protein [Aromatoleum aromaticum EbN1]
gi|81357766|sp|Q5P4Z2|QUEC_AZOSE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56312975|emb|CAI07620.1| similar to queC gene product; involved in queuosine biosynthesis
[Aromatoleum aromaticum EbN1]
Length = 226
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 72/239 (30%), Positives = 107/239 (44%), Gaps = 29/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + A++L SGG DS+TCL+ A + LS YGQR+ EL V + +
Sbjct: 1 MTEPKRAIVLLSGGLDSATCLAIARNAGFDCYALSIAYGQRHTAELAAARRVAQSLDA-- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+H L LG+ S+LT + V ++ +P T+VP RN + L A
Sbjct: 59 --------REHRLAHVSLGEFGGSALTDSSIPVPIEGAVGGIPVTYVPARNTVMLSIALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
A LG +I +GV DYSGYPDCR + I A E NL ++ + +H PL+ L
Sbjct: 111 WAEVLGAHDIYVGVNAVDYSGYPDCRPEFIAAFEAMANLATKAGIEGARITIHAPLIRLS 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + +G + ++ +CY G C C AC LR+ G+
Sbjct: 171 KAGIIQRGTALG------VDYAQTVSCYQADE-----AGRACGVCDACRLRKAGFEAAG 218
>gi|108563047|ref|YP_627363.1| hypothetical protein HPAG1_0622 [Helicobacter pylori HPAG1]
gi|118574285|sp|Q1CTN3|QUEC_HELPH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|107836820|gb|ABF84689.1| ExsB trans-regulatory protein [Helicobacter pylori HPAG1]
Length = 228
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 98/232 (42%), Positives = 151/232 (65%), Gaps = 18/232 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VVSFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+ S+L KN +Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IISLDFLENITRSALFKNSNDLMGHSHVQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G +++L+++E+HTCY G+R + +GYGCN CPAC LR+KG+ EF+ K
Sbjct: 177 LG---VLDLVIKETHTCYQGERKILHAYGYGCNECPACQLRKKGYEEFQTKV 225
>gi|257075836|ref|ZP_05570197.1| hypothetical protein Faci_02164 [Ferroplasma acidarmanus fer1]
Length = 239
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 109/236 (46%), Gaps = 33/236 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS T L++ALD +V +SFDYGQR+ EL+ + + K
Sbjct: 3 NDKAVILISGGLDSPTVLAYALDNGYKVYPVSFDYGQRHIRELQSSEDICNYYGVKLKKI 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATL 122
K + I S+LT + + + + +P T+VP RN IF+ AA
Sbjct: 63 K-----------IDMTQIGGSALTDKIDVPERGLENIEKEIPVTYVPARNTIFISLAAAY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME----SHVTVHTPLMWLKKY 178
+ +I IG DYSGYPDCR + +E +NLG E + PL +L K
Sbjct: 112 GETIKANSIFIGANAIDYSGYPDCRPEFFNTMEKTLNLGTELGITDGFRIMVPLQYLTKS 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ KL + +G + + +CY G+ C C +C LR KG+ME
Sbjct: 172 DIVKLGRRLG------VPYRLTWSCYNGRDK-------ACGKCDSCLLRLKGFMEA 214
>gi|226952146|ref|ZP_03822610.1| ExsB family protein [Acinetobacter sp. ATCC 27244]
gi|294651042|ref|ZP_06728381.1| trans-regulatory protein ExsB [Acinetobacter haemolyticus ATCC
19194]
gi|226837108|gb|EEH69491.1| ExsB family protein [Acinetobacter sp. ATCC 27244]
gi|292823055|gb|EFF81919.1| trans-regulatory protein ExsB [Acinetobacter haemolyticus ATCC
19194]
Length = 226
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 80/242 (33%), Positives = 119/242 (49%), Gaps = 32/242 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + ++ A++L SGG DS+TCL+WA R+D V +SF YGQR+ EL+ + ++
Sbjct: 1 MENNMRS--RAIVLLSGGLDSTTCLAWAQARYDCV-AISFMYGQRSTTELDAAKALAQR- 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVF 118
G +H + LG++ S+LT N+ + Q +P T+VP RN IFL +
Sbjct: 57 ----------AGVEHRVINIDLGNLGGSALTDHNIDVPEQLQEGIPVTYVPARNTIFLSY 106
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A IVIGV DYSGYPDCR + I A L ++ V + TPL+
Sbjct: 107 ALAAAEVFDAEAIVIGVNAVDYSGYPDCRPEFIDAFANLARLATKAGVEGKPLKIETPLL 166
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K +L + G + ++ +CY G C C +C LRQ+G++E
Sbjct: 167 HLSKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRQQGFIE 215
Query: 234 FK 235
Sbjct: 216 AG 217
>gi|94676652|ref|YP_588712.1| exsB protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|110816212|sp|Q1LTK2|QUEC_BAUCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|94219802|gb|ABF13961.1| exsB protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 238
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 92/240 (38%), Positives = 144/240 (60%), Gaps = 23/240 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
++ +++FSGGQDS+TCL AL ++D+V ++FDYGQR++ E+ C+ +++ +
Sbjct: 4 NQQIKKTVVVFSGGQDSTTCLIQALTQYDQVYCITFDYGQRHRAEI----CIARRLTITL 59
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPN----TFVPGRNIIFLVFA 119
+ + I+ + L ++ SSLT +N+ + + + N N TFVPGRNI+FL A
Sbjct: 60 GAY-----DHQIIDTSALNVLAASSLTRENIIVPLAEKNHMNSSLSTFVPGRNIVFLTLA 114
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A AY++ I+ GVCETD+SGYPDCR I+A+ A+NLGM ++ +PLMWL K E
Sbjct: 115 AIYAYQVKAEVIITGVCETDFSGYPDCREKFIQALNKAVNLGMAYNIHFISPLMWLNKAE 174
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
TW LA ++L+ E+ TCY G + G GC C +C LR +G +K++ +
Sbjct: 175 TWALAD---YYQKLDLVCNETLTCYNGIQ------GKGCGFCTSCSLRARGLETYKQQPK 225
>gi|307721058|ref|YP_003892198.1| preQ(0) biosynthesis protein QueC [Sulfurimonas autotrophica DSM
16294]
gi|306979151|gb|ADN09186.1| preQ(0) biosynthesis protein QueC [Sulfurimonas autotrophica DSM
16294]
Length = 227
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKK 59
M K A+ + SGG DS+ + + + F+Y QR + ELEC +
Sbjct: 1 MKKENKTNKKAVCIMSGGMDSTLSAYMMQNEGYEIIAVHFNYDQRTQTKELECFENICAS 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFL 116
+ + + +IL L + S+LT V + + +P T+VP RN IFL
Sbjct: 61 L---------HVKQKYILDLDFFKQLGASALTDKTIEVPTQGIEEGVPVTYVPFRNGIFL 111
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMW 174
AA +A + I IGV E D SGYPDCR + I+A++ AINLG E+++ + PL+
Sbjct: 112 SMAAAIAEKESAQIISIGVVEEDSSGYPDCREEYIKAMQNAINLGTKEETNIEIKMPLVH 171
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
LKK + + A + N+ LE + +CY ++ C C +C LR G+
Sbjct: 172 LKKSQIVQEALKL------NVPLELTWSCYKNEKK-------ACGICDSCRLRLNGFE 216
>gi|313105863|ref|ZP_07792126.1| hypothetical protein PA39016_000110160 [Pseudomonas aeruginosa
39016]
gi|310878628|gb|EFQ37222.1| hypothetical protein PA39016_000110160 [Pseudomonas aeruginosa
39016]
Length = 224
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V +++
Sbjct: 3 QKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G + S+LT + +P T+VP RN +FL A A
Sbjct: 56 --GVIEHKVIGLDLNG-MGGSALTDESIAVPESPSAGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + A E NL + + + PL +L K +
Sbjct: 113 LDARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G + + +CY G C C +C LR G+
Sbjct: 173 IQAGVARG------VDYGLTVSCYQADEQ-----GRACGKCDSCRLRADGFAAAG 216
>gi|226940053|ref|YP_002795126.1| aluminum resistance protein [Laribacter hongkongensis HLHK9]
gi|254764355|sp|C1D6L0|QUEC_LARHH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|226714979|gb|ACO74117.1| aluminum resistance protein [Laribacter hongkongensis HLHK9]
Length = 229
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 101/237 (42%), Positives = 135/237 (56%), Gaps = 25/237 (10%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D ++ AL++ SGGQDS+TCL WAL RF +V +SFDYGQR++VEL+ +
Sbjct: 2 DSLRDPEHALVVLSGGQDSTTCLYWALSRFAQVSAISFDYGQRHRVELDAARTIA----- 56
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVF 118
+ I+P+ + ++LT + LPNTFVPGRN++FL F
Sbjct: 57 -----AMAGVGHTIIPINTFSALGGNALTDQQMSPDTGPDAETLLPNTFVPGRNLVFLTF 111
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA A+ GI +IV GV +TDYSGYPDCR +T+RA+E AINLGMES + +H PLM+L K
Sbjct: 112 AAAWAWPRGIRHIVTGVAQTDYSGYPDCRENTLRALELAINLGMESRMRLHMPLMFLSKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+T LA+ +G + SHTCY G C C AC LR KG+ E
Sbjct: 172 DTVTLARTVGAMPAL----AFSHTCYAGAVPP-------CGQCAACVLRAKGFAEAG 217
>gi|109947331|ref|YP_664559.1| hypothetical protein Hac_0767 [Helicobacter acinonychis str.
Sheeba]
gi|123173443|sp|Q17XR6|QUEC_HELAH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|109714552|emb|CAJ99560.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 225
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 98/232 (42%), Positives = 149/232 (64%), Gaps = 18/232 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAIWAAKRFKKVYLVGFDYAQKHSVELECA----QKIASLLKLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+HS+L KN +Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IIQLDFLENITHSALFKNSNDLIGHSHVQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GANNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTTIKIVTPLMFLSKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G ++LI++E+HTCY G+R + +GYGC C AC LR+KG+ EF+ ++
Sbjct: 177 LGA---LDLIIKETHTCYQGERKILHAYGYGCGECLACQLRKKGYEEFQARF 225
>gi|269468715|gb|EEZ80340.1| PP-loop superfamily ATPase [uncultured SUP05 cluster bacterium]
Length = 228
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 80/239 (33%), Positives = 112/239 (46%), Gaps = 29/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A++L SGG DS+T L+ A + LSFDYGQ+ K EL + K+
Sbjct: 3 NQNPEKAIVLLSGGLDSTTALAIAKSQGFECYALSFDYGQKQKSELNSAKKIAKQFDA-- 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMK--IQDNNLPNTFVPGRNIIFLVFAAT 121
+H + L D S+LT KN+A+ Q + +P T+VP RN IFL +A
Sbjct: 61 --------TEHRIMSISLSDFGGSALTDKNIAVPDFKQSDEIPITYVPARNTIFLSYALA 112
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
A L +I IGV TDYSGYPDCR + I A E NL + + VHTPL+ L
Sbjct: 113 WAEVLESQSIFIGVNSTDYSGYPDCRQEYITAFEIMANLATKQGIEGQKITVHTPLINLD 172
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + +G + + TCY + G C +C AC R++G+
Sbjct: 173 KSQIITQGLSLG------IDYSLTTTCYQADNE-----GKACGTCDACEYRKQGFKSAG 220
>gi|116327179|ref|YP_796899.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332169|ref|YP_801887.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122280102|sp|Q04PP1|QUEC_LEPBJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|122284975|sp|Q055M9|QUEC_LEPBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|116119923|gb|ABJ77966.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125858|gb|ABJ77129.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 242
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 117/240 (48%), Gaps = 32/240 (13%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ A++L SGG DS+TCL AL +++ LSFDYGQ++K+EL + ++
Sbjct: 20 KSSQENDKAVVLLSGGLDSTTCLYQALADGKKIQALSFDYGQKHKIELSYAKKITRQ--- 76
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVF 118
LG H + SSLT+ + +PNT+VPGRNI+FL F
Sbjct: 77 --------LGISHTIQKLKPELFLGSSLTQKSLRVPKNSLGKEEIPNTYVPGRNILFLSF 128
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLM 173
A LA G +I IGV DYSGYPDCR + I+ ETAI LG + + + TPL
Sbjct: 129 AVCLAEGTGSNSIYIGVNAMDYSGYPDCRPEFIKTYETAIQLGTKKGNQGSPIKIVTPLQ 188
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K E L + + + +CY K K C C AC LR+KG+ E
Sbjct: 189 NLSKKEIVLLGNRL------QVPFHLTFSCYDPKNRK------ACGKCDACLLRKKGFQE 236
>gi|188527512|ref|YP_001910199.1| ExsB trans-regulatory protein [Helicobacter pylori Shi470]
gi|308182872|ref|YP_003926999.1| ExsB trans-regulatory protein [Helicobacter pylori PeCan4]
gi|254764353|sp|B2UTI7|QUEC_HELPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|188143752|gb|ACD48169.1| ExsB trans-regulatory protein [Helicobacter pylori Shi470]
gi|297379840|gb|ADI34727.1| exsB protein [Helicobacter pylori v225d]
gi|308065057|gb|ADO06949.1| ExsB trans-regulatory protein [Helicobacter pylori PeCan4]
Length = 226
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 149/230 (64%), Gaps = 18/230 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+++L+++E+HTCY G+R + +GYGC CPAC LR+KG+ EF+ +
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCGECPACQLRKKGYEEFESNKK 226
>gi|169795076|ref|YP_001712869.1| hypothetical protein ABAYE0921 [Acinetobacter baumannii AYE]
gi|260551477|ref|ZP_05825661.1| queuosine biosynthesis protein queC [Acinetobacter sp. RUH2624]
gi|260556562|ref|ZP_05828780.1| queuosine biosynthesis protein queC [Acinetobacter baumannii ATCC
19606]
gi|332851075|ref|ZP_08433184.1| protein ExsB [Acinetobacter baumannii 6013150]
gi|332869676|ref|ZP_08438864.1| protein ExsB [Acinetobacter baumannii 6013113]
gi|332875965|ref|ZP_08443751.1| protein ExsB [Acinetobacter baumannii 6014059]
gi|169148003|emb|CAM85866.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|260405471|gb|EEW98964.1| queuosine biosynthesis protein queC [Acinetobacter sp. RUH2624]
gi|260409821|gb|EEX03121.1| queuosine biosynthesis protein queC [Acinetobacter baumannii ATCC
19606]
gi|322509050|gb|ADX04504.1| Queuosine biosynthesis protein queC [Acinetobacter baumannii
1656-2]
gi|323519032|gb|ADX93413.1| hypothetical protein ABTW07_2990 [Acinetobacter baumannii
TCDC-AB0715]
gi|332730239|gb|EGJ61564.1| protein ExsB [Acinetobacter baumannii 6013150]
gi|332732578|gb|EGJ63811.1| protein ExsB [Acinetobacter baumannii 6013113]
gi|332735831|gb|EGJ66872.1| protein ExsB [Acinetobacter baumannii 6014059]
Length = 227
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 76/242 (31%), Positives = 116/242 (47%), Gaps = 32/242 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ P A++L SGG DS+TCL+WA R+ +SF YGQR+ EL+ + ++
Sbjct: 1 MEKNMR--PRAIVLLSGGLDSTTCLAWAQARY-ECIAISFMYGQRSTTELDAAKALAQR- 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVF 118
G +H + L ++ S+LT N+A+ Q +P T+VP RN IFL +
Sbjct: 57 ----------AGVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSY 106
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A IVIG+ DYSGYPDCR + I A L ++ V TPL+
Sbjct: 107 ALAAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLL 166
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K +L + G + ++ +CY G C C +C LR++G+++
Sbjct: 167 HLSKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFID 215
Query: 234 FK 235
Sbjct: 216 AG 217
>gi|217969209|ref|YP_002354443.1| exsB protein [Thauera sp. MZ1T]
gi|217506536|gb|ACK53547.1| exsB protein [Thauera sp. MZ1T]
Length = 233
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 100/236 (42%), Gaps = 29/236 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
P A++L SGG DS+TCL+ A D LS YGQR+ EL V + +
Sbjct: 7 PPRAVVLLSGGLDSATCLAIARDMGFETYALSVAYGQRHAAELAASKRVAQALGA----- 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+H LG S+LT V + + +P T+VP RN + L A A
Sbjct: 62 -----REHRTASVELGQFGGSALTDPGIAVPLDQDNTGIPVTYVPARNTVMLSIALAWAE 116
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
LG +I +GV DYSGYPDCR I A E L + V +H PL+ L K +
Sbjct: 117 VLGANDIFVGVNAVDYSGYPDCRPVFIEAFEHMARLATKVGVEGAQLHIHAPLIELSKAD 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + TCY D G C C AC LR G+
Sbjct: 177 IIRRGTALG------VDYGLTVTCYQADDD-----GLACGRCEACRLRAAGFKAAG 221
>gi|317009346|gb|ADU79926.1| hypothetical protein HPIN_03450 [Helicobacter pylori India7]
Length = 228
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 148/231 (64%), Gaps = 18/231 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VIGFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIQLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G ++L+++E+HTCY G+R + +GYGC CPAC LR+KG+ EF+
Sbjct: 177 LGA---LDLVIKETHTCYQGERKILHAYGYGCGECPACQLRKKGYEEFQTN 224
>gi|169632732|ref|YP_001706468.1| hypothetical protein ABSDF0931 [Acinetobacter baumannii SDF]
gi|169151524|emb|CAP00291.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii]
Length = 227
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 76/242 (31%), Positives = 116/242 (47%), Gaps = 32/242 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ P A++L SGG DS+TCL+WA R +SF YGQR+ EL+ + ++
Sbjct: 1 MEKNMR--PRAIVLLSGGLDSTTCLAWAQAR-HECIAISFMYGQRSTTELDAAKALAQRA 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVF 118
E H++ + L ++ S+LT N+A+ Q +P T+VP RN IFL +
Sbjct: 58 G----------VEHHVINID-LANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSY 106
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A IVIG+ DYSGYPDCR + I A L ++ V TPL+
Sbjct: 107 ALAAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLL 166
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K +L + G + ++ +CY G C C +C LR++G+++
Sbjct: 167 HLSKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFID 215
Query: 234 FK 235
Sbjct: 216 AG 217
>gi|299769137|ref|YP_003731163.1| hypothetical protein AOLE_04465 [Acinetobacter sp. DR1]
gi|298699225|gb|ADI89790.1| hypothetical protein AOLE_04465 [Acinetobacter sp. DR1]
Length = 222
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 113/236 (47%), Gaps = 30/236 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P A++L SGG DS+TCL+WA R+ +SF YGQR+ EL+ + ++
Sbjct: 1 MRPRAIVLLSGGLDSTTCLAWAQARY-ECIAISFMYGQRSTTELDAAKALAQR------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAY 124
G +H + L ++ S+LT N+A+ Q +P T+VP RN IFL +A A
Sbjct: 53 ----AGVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSYALAAAE 108
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
IVIG+ DYSGYPDCR + I A L ++ V TPL+ L K
Sbjct: 109 VFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKAN 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+L + G + ++ +CY G C C +C LR++G++E
Sbjct: 169 IIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIEAG 213
>gi|254521815|ref|ZP_05133870.1| exsB protein [Stenotrophomonas sp. SKA14]
gi|219719406|gb|EED37931.1| exsB protein [Stenotrophomonas sp. SKA14]
Length = 221
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V K
Sbjct: 2 KKAVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELDAAARVAK---------A 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + L I S+LT ++ + +P T+VP RN I L A A LG
Sbjct: 53 QRVVAHKTVDVD-LRSIGGSALTDDIDVPEAGGAGIPVTYVPARNTIMLSLALGWAEVLG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
+I GV DYSGYPDCR + + A + NL + + + VH PL +L K +
Sbjct: 112 ANDIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIQVHAPLQFLSKGQIVS 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY G C C AC LR +G+ E
Sbjct: 172 EGVRLG------VDFGLTVSCYNAD-----ANGAACGHCDACRLRAQGFAEAG 213
>gi|78485246|ref|YP_391171.1| ExsB [Thiomicrospira crunogena XCL-2]
gi|110816274|sp|Q31H76|QUEC_THICR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78363532|gb|ABB41497.1| ExsB family protein [Thiomicrospira crunogena XCL-2]
Length = 232
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 30/236 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A + T+SFDYGQR++ EL + +
Sbjct: 7 KKAVVLLSGGLDSATVLAIAQAQGFECHTISFDYGQRHRAELIAAERISR---------- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKI---QDNNLPNTFVPGRNIIFLVFAATLAY 124
S + H + + I S+LT + + + + + +P T+VP RN +FL +A LA
Sbjct: 57 VSGAKTHRVMEMNMHAIGGSALTDDSIDVPVSGVEKEMIPVTYVPARNTVFLSYALALAE 116
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLKKYE 179
L +I IGV DYSGYPDCR + I A E NL ++ V H TPL+ L K E
Sbjct: 117 VLEADDIFIGVNAVDYSGYPDCRPEYIAAYEKMANLATKAGVEGHKMHIQTPLIDLTKAE 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + ++ +CY ++ G C C +C LR++G+
Sbjct: 177 IIQTGVKLG------VDYSQTVSCYQADKN-----GAACGICDSCRLRKQGFENAG 221
>gi|119896704|ref|YP_931917.1| ExsB protein [Azoarcus sp. BH72]
gi|189038894|sp|A1K2H5|QUEC_AZOSB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119669117|emb|CAL93030.1| conserved hypothetical ExsB protein [Azoarcus sp. BH72]
Length = 228
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 106/239 (44%), Gaps = 29/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ P A++L SGG DS+TCL+ A D LS YGQR+ EL V +
Sbjct: 1 MTDLPRAVVLLSGGLDSATCLAIARDMGLETYALSVAYGQRHAAELTASRRVAHALGA-- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+H + LG+ S+LT V +P T+VP RN + L A
Sbjct: 59 --------REHRVASVSLGEFGGSALTDPAIAVPEDAAPGGIPVTYVPARNTVMLSMALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
A LG +I +GV DYSGYPDCR I+A ET NL ++ V +H PL+ L
Sbjct: 111 WAEVLGARHIFVGVNAVDYSGYPDCRPAFIQAFETMANLATKAGVEGHPTTIHAPLIDLS 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + +G + + +CY D G C C AC LR++G+
Sbjct: 171 KADIIRRGVALG------VDYGLTVSCYQADDD-----GRACGRCDACRLRREGFAAAG 218
>gi|300112862|ref|YP_003759437.1| exsB protein [Nitrosococcus watsonii C-113]
gi|299538799|gb|ADJ27116.1| exsB protein [Nitrosococcus watsonii C-113]
Length = 224
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AP A++L SGG DS+T L+ A ++ TLSF+YGQR+ VEL+ + +++ + K
Sbjct: 3 APKAVVLVSGGLDSATVLAIAREQAFICHTLSFNYGQRHSVELQAAAEISRQMGAVEHKC 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ L G + + + V + +P T+VP RN +FL FA A LG
Sbjct: 63 I-------TIDLGGFGGSALTDPSMAVP-EASTGTIPITYVPARNTVFLSFALGWAEVLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR I+A E L + PL+ L K + +
Sbjct: 115 AQDIFIGVNAVDYSGYPDCRPAFIKAFEQLAKLATCAGLEGRSFRIQAPLLPLSKADIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY + G C C +C LR++G+ +
Sbjct: 175 EGMRLG------VNYSRTISCYQADEN-----GRACGVCDSCRLRKQGFWDAG 216
>gi|154490850|ref|ZP_02030791.1| hypothetical protein PARMER_00767 [Parabacteroides merdae ATCC
43184]
gi|154088598|gb|EDN87642.1| hypothetical protein PARMER_00767 [Parabacteroides merdae ATCC
43184]
Length = 273
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 132/235 (56%), Gaps = 23/235 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E +
Sbjct: 58 EAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA----------A 107
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
D+ +L ++++ + + N + + ++ PNTFVPGRN++FL FAA LA
Sbjct: 108 DADVPFQLLDVSLISQLDPNCSLTNTGISMDQEKPADSYPNTFVPGRNMVFLTFAAILAR 167
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
GI N+V GV E D+SGYPDCR +R++ +NL M+ +HTPLM K E W+LA
Sbjct: 168 SKGIFNLVTGVSEADFSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEVWELA 227
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++G DLV ++ TCY G GC CPAC LR++G ++ ++ +
Sbjct: 228 DELGVFDLVR---TQTLTCYNGI------MAEGCGHCPACKLRREGLEKYLKRRR 273
>gi|319957259|ref|YP_004168522.1| preq(0) biosynthesis protein quec [Nitratifractor salsuginis DSM
16511]
gi|319419663|gb|ADV46773.1| preQ(0) biosynthesis protein QueC [Nitratifractor salsuginis DSM
16511]
Length = 225
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 115/233 (49%), Gaps = 28/233 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
A+ + SGG DS+ + A + + F+YGQR + ELEC + + + +
Sbjct: 2 KKAVCIISGGMDSAVSAALAKREGYEIIAVHFNYGQRTERKELECFRLLAEDLEAV---- 57
Query: 68 KDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E + + L I S+LT +V + + +P T+VP RN IFL AA +A
Sbjct: 58 -----ERYEIDLPFFTQIGASALTDPSIDVPTEGLEPGVPVTYVPFRNGIFLSIAAAIAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
+ G IVIGV E D SGYPDCR IRA+E AINLG E+ +T+ PL+ L+K E
Sbjct: 113 KHGAEAIVIGVVEEDSSGYPDCRESYIRAMEKAINLGTKEETKITIKMPLVHLRKSEIVT 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A +IG + L + +CY + C C +C LR +G+ +
Sbjct: 173 KALEIG------VDLSHTWSCYKEEEA-------ACGVCDSCRLRLEGFKQAG 212
>gi|295695131|ref|YP_003588369.1| exsB protein [Bacillus tusciae DSM 2912]
gi|295410733|gb|ADG05225.1| exsB protein [Bacillus tusciae DSM 2912]
Length = 240
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +A A+++ SGG DS+TC++ A + ++F YGQ++ VELE V
Sbjct: 1 MEHRALRAVVILSGGLDSTTCMAIADHEGYELYPITFSYGQKHAVELESAKQVAAHYRV- 59
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTK-------NVAMKIQDNNLPNTFVPGRNIIFL 116
++ L I SSLT +++ +P+T+VPGRN +FL
Sbjct: 60 -------GDRHRVVDLGNF--IRGSSLTDPDQSIPVGRSLEEIGTGVPSTYVPGRNTVFL 110
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTP 171
A + A R+ I IGV DYSGYPDCR + ++A + I+ G + + + P
Sbjct: 111 SLALSFAERIDAQAIFIGVNALDYSGYPDCRPEFLQAFQRVIDTGTVAGTEGAGIRLKAP 170
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ L K E + +G +H+CY G C C +C +R +G+
Sbjct: 171 LVHLTKAEIIRRGSQLGA------PYALTHSCYQGTVP-------ACGVCDSCRIRIQGF 217
Query: 232 MEFK 235
E
Sbjct: 218 REAG 221
>gi|158520513|ref|YP_001528383.1| exsB protein [Desulfococcus oleovorans Hxd3]
gi|158509339|gb|ABW66306.1| exsB protein [Desulfococcus oleovorans Hxd3]
Length = 228
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 30/241 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A++L SGG DS+T ++ A+ + V +L+FDYGQR++ EL V + +
Sbjct: 1 MTADSRRAVVLSSGGIDSTTAMAMAVSQGFSVFSLTFDYGQRHRHELSAARAVARHLNA- 59
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFAA 120
E H++ I S+LT ++ + +N +P T+VP RN IFL +A
Sbjct: 60 ---------EKHLVLETDFRKIGGSALTADIPVPGTGPVENTIPVTYVPARNTIFLAYAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMW 174
A L +I IGV DYSGYPDCR + I A NLG ++ V VHTPL+
Sbjct: 111 AWAETLDAADIFIGVNAVDYSGYPDCRPEYIEAFARVANLGSKAGVEGRITFAVHTPLIH 170
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ K E + +G + + +CY G C C +C +R+KG+++
Sbjct: 171 MTKAEIIRTGAALG------VDYSITSSCYD-----PSPEGLACGLCDSCRIRKKGFVDA 219
Query: 235 K 235
Sbjct: 220 G 220
>gi|224824583|ref|ZP_03697690.1| exsB protein [Lutiella nitroferrum 2002]
gi|224603076|gb|EEG09252.1| exsB protein [Lutiella nitroferrum 2002]
Length = 230
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 99/239 (41%), Positives = 137/239 (57%), Gaps = 29/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + AL++ SGGQDS+TCL WAL RF D VE ++FDYGQR++VEL+ +
Sbjct: 1 MNSSDKALVVLSGGQDSTTCLYWALQRFGADNVEAVTFDYGQRHRVELDSARTIA----- 55
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFL 116
+ +LP+ I ++LT D LPNTFVPGRN+IFL
Sbjct: 56 -----ALAGVPHTVLPIDTFAAIGGNALTDASITPESGARADDDTALPNTFVPGRNLIFL 110
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
FAA Y G ++V GV +TDYSGYPDCR +T++A+E A+ LG+++ V +HTPLM+L
Sbjct: 111 NFAAAFGYTRGARHLVTGVAQTDYSGYPDCRENTLKALELALRLGLDARVELHTPLMYLS 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K +T +LAQ +G + + SHTCY G++ C C AC LR KG+ E
Sbjct: 171 KADTVRLAQQVGAMEAM----AFSHTCYNGEQPP-------CGHCAACELRAKGFAEAG 218
>gi|325274587|ref|ZP_08140643.1| exsB protein [Pseudomonas sp. TJI-51]
gi|324100229|gb|EGB98019.1| exsB protein [Pseudomonas sp. TJI-51]
Length = 224
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T ++ A T+SFDYGQR++ EL V + +
Sbjct: 3 EKRAVILLSGGLDSATVVAMAKADGYSCYTMSFDYGQRHRAELNAAARVARDL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E ++ L + G I S+LT + + +P T+VP RN +FL A A
Sbjct: 56 --GVVEHKVIGLNLDG-IGGSALTDSSIDVPETPGEGIPVTYVPARNTVFLSLALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
L +I IGV DYSGYPDCR + + A E NL ++ V + PL + K +
Sbjct: 113 LEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G + + +CY + G C C +C LR G+
Sbjct: 173 VQAGMARG------VDYSLTVSCYQADDE-----GRACGKCDSCRLRADGFRAAG 216
>gi|320540343|ref|ZP_08039995.1| putative aluminum resistance protein [Serratia symbiotica str.
Tucson]
gi|320029663|gb|EFW11690.1| putative aluminum resistance protein [Serratia symbiotica str.
Tucson]
Length = 232
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 137/237 (57%), Gaps = 23/237 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL ++D V ++FDYGQR+ E+ +
Sbjct: 2 KRAVVIFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHHAEIAVAQELS---------LT 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKI----QDNNLPNTFVPGRNIIFLVFAATLA 123
+L + +L +++ SSLT++ + + Q N LP+TFVPGRNI+FL AA A
Sbjct: 53 LGAKAHKVLDVGLLNELAISSLTRDNIPVPAYNLNQKNALPSTFVPGRNILFLTLAAIYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
Y++ ++ GVCETD+SGYPDCR + I+A+ AI LG+ H+ TPLMWL K ETW L
Sbjct: 113 YQIAAETVITGVCETDFSGYPDCRDEFIKALNQAIVLGIARHIRFETPLMWLNKAETWAL 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
A ++L+ +++ TCY G + G GC C AC+LR G +++ +
Sbjct: 173 AD---YYHQLDLVRQDTLTCYNGIK------GEGCGECAACHLRANGLAQYQLNKAE 220
>gi|307637328|gb|ADN79778.1| Queuosine Biosynthesis QueC ATPase [Helicobacter pylori 908]
gi|325995919|gb|ADZ51324.1| Queuosine Biosynthesis protein [Helicobacter pylori 2018]
gi|325997513|gb|ADZ49721.1| Queuosine Biosynthesis QueC ATPase [Helicobacter pylori 2017]
Length = 228
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 151/231 (65%), Gaps = 18/231 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G ++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 177 LGA---LDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQAK 224
>gi|291612994|ref|YP_003523151.1| exsB protein [Sideroxydans lithotrophicus ES-1]
gi|291583106|gb|ADE10764.1| exsB protein [Sideroxydans lithotrophicus ES-1]
Length = 225
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 67/234 (28%), Positives = 101/234 (43%), Gaps = 24/234 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS DYGQR+ EL V + + +
Sbjct: 1 MTKRAVVLLSGGLDSATVLAMARTQGFECYALSVDYGQRHHAELAAAQRVAQSLGAREQR 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + L G + + V + + +P T+VP RN I L A A L
Sbjct: 61 VVN-------IDLTGFGGSALTDANIAVP-EQAGSGIPITYVPARNTIMLSLALAWAEVL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
+I GV DYSGYPDCR + + A E NL ++ V +H PL+ L K E
Sbjct: 113 KAQDIFFGVNAVDYSGYPDCRPEYVAAFERMANLATQAAVEGKPLTLHAPLLHLSKAEII 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C +C LR++G+
Sbjct: 173 RQGVRLG------VDYGLTVSCYQADDE-----GRACGRCDSCRLRREGFAAAG 215
>gi|317014059|gb|ADU81495.1| hypothetical protein HPGAM_03285 [Helicobacter pylori Gambia94/24]
Length = 225
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 152/231 (65%), Gaps = 18/231 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G +++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 177 LG---VLDLIIKETHTCYQGERKILHAYGYGCDECPACQLRKKGFEEFQAK 224
>gi|304312905|ref|YP_003812503.1| ExsB protein [gamma proteobacterium HdN1]
gi|301798638|emb|CBL46870.1| ExsB protein [gamma proteobacterium HdN1]
Length = 233
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 76/242 (31%), Positives = 115/242 (47%), Gaps = 29/242 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +A++L SGG DS+TCL+ A + V LSF YGQR+ VELE V +
Sbjct: 1 MSNHRAAIVLLSGGLDSATCLALARQQGFDVYALSFSYGQRHSVELEASRRVAHALGATA 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLVF 118
+ + + LA G + + L+ +V + +P T+VP RN IFL +
Sbjct: 61 HRIAN-------IDLAAFGGSALTDLSIDVPVAAPNAPVDHSEEIPITYVPARNTIFLSY 113
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A L +I IGV DYSGYPDCR + I A ET NL V +H PLM
Sbjct: 114 ALAWAEVLESDDIFIGVNAVDYSGYPDCRLEFINAFETMANLATRRAVEGAKLHIHAPLM 173
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ K + ++ +G + + +CY + G C +C +C LR++G+++
Sbjct: 174 KMSKAQIIEVGVSLG------VDYGATISCYQAD-----DQGAACGACDSCRLRREGFLQ 222
Query: 234 FK 235
Sbjct: 223 AG 224
>gi|332970921|gb|EGK09897.1| transcription regulator ExsB [Psychrobacter sp. 1501(2011)]
Length = 268
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 81/253 (32%), Positives = 119/253 (47%), Gaps = 41/253 (16%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N +A++L SGG DS TCL WA R+ +V +SF+YGQR+ EL + K+
Sbjct: 28 NIATNAQQNAVVLLSGGLDSVTCLYWAKSRYSKVTAVSFNYGQRHNSELVAAKTIAKQ-- 85
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNV--------------AMKIQDNNLPNTF 107
G DH + + + SSLT + I ++ +PNT+
Sbjct: 86 ---------AGVDHKIIDIDIAQLGGSSLTDHDMTVPDGDADKFPTHTDTIDNDAIPNTY 136
Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV- 166
VP RN IFL +A +A +IVIGV DYSGYPDCR + I A E NL ++ V
Sbjct: 137 VPARNTIFLSYALAVAEVTDANHIVIGVSSVDYSGYPDCRPEYIEAFEVMANLATKAGVT 196
Query: 167 ----TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCP 222
+ TPL L K +T +L +G + ++ +CY + G C C
Sbjct: 197 GHKLHIQTPLQKLSKAQTIQLGNSLG------VDYSQTISCYKADAE-----GRACGICD 245
Query: 223 ACYLRQKGWMEFK 235
+C LR++G+ +
Sbjct: 246 SCTLRKRGFSDAG 258
>gi|184159136|ref|YP_001847475.1| PP-loop superfamily ATPase [Acinetobacter baumannii ACICU]
gi|213158262|ref|YP_002320313.1| ExsB protein [Acinetobacter baumannii AB0057]
gi|215482626|ref|YP_002324818.1| Queuosine biosynthesis protein queC [Acinetobacter baumannii
AB307-0294]
gi|239501046|ref|ZP_04660356.1| hypothetical protein AbauAB_01927 [Acinetobacter baumannii AB900]
gi|301346461|ref|ZP_07227202.1| hypothetical protein AbauAB0_09454 [Acinetobacter baumannii AB056]
gi|301512447|ref|ZP_07237684.1| hypothetical protein AbauAB05_12717 [Acinetobacter baumannii AB058]
gi|301594744|ref|ZP_07239752.1| hypothetical protein AbauAB059_03007 [Acinetobacter baumannii
AB059]
gi|183210730|gb|ACC58128.1| predicted PP-loop superfamily ATPase [Acinetobacter baumannii
ACICU]
gi|193078033|gb|ABO12959.2| hypothetical protein A1S_2542 [Acinetobacter baumannii ATCC 17978]
gi|213057422|gb|ACJ42324.1| ExsB protein [Acinetobacter baumannii AB0057]
gi|213987229|gb|ACJ57528.1| Queuosine biosynthesis protein queC [Acinetobacter baumannii
AB307-0294]
Length = 223
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 112/236 (47%), Gaps = 30/236 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P A++L SGG DS+TCL+WA R +SF YGQR+ EL+ + ++
Sbjct: 1 MRPRAIVLLSGGLDSTTCLAWAQAR-YECIAISFMYGQRSTTELDAAKALAQR------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVFAATLAY 124
G +H + L ++ S+LT N+A+ Q +P T+VP RN IFL +A A
Sbjct: 53 ----AGVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSYALAAAE 108
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
IVIG+ DYSGYPDCR + I A L ++ V TPL+ L K
Sbjct: 109 VFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKAN 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+L + G + ++ +CY G C C +C LR++G+++
Sbjct: 169 IIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIDAG 213
>gi|158335496|ref|YP_001516668.1| ExsB protein [Acaryochloris marina MBIC11017]
gi|189038885|sp|B0C253|QUEC_ACAM1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|158305737|gb|ABW27354.1| ExsB protein [Acaryochloris marina MBIC11017]
Length = 228
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 30/237 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A +SFDY QR++ EL+ + + +
Sbjct: 2 KAVVLLSGGLDSSTALYKAKADGADCYAISFDYRQRHRQELDSAVAIAQ----------S 51
Query: 70 SLGEDHILPLAILGDISHSSLTK------NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ H + L S+LT + +++ +++P T+VP RN IFL FA A
Sbjct: 52 AQVTQHQIVAFDLTLWGGSALTDTQIDLPSRSIEEMADHIPVTYVPARNSIFLSFALAYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
+ + IGV + DYSGYPDCR D I+A++ LG + + + TPL+ L K
Sbjct: 112 ETISAEQVYIGVNQLDYSGYPDCRPDFIQAMQEVFRLGTKLGREGQAIEICTPLINLHKS 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+L D+G + E++ +CY D C C +C LR + +
Sbjct: 172 AIIELGNDLG------VPWEQTWSCYS---DGGGSPPLACGQCDSCQLRLAAFAQLG 219
>gi|262278176|ref|ZP_06055961.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258527|gb|EEY77260.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 226
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 76/242 (31%), Positives = 115/242 (47%), Gaps = 32/242 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ P A++L SGG DS+TCL+WA R+ +SF YGQR+ EL+ + ++
Sbjct: 1 MEKNMR--PRAIVLLSGGLDSTTCLAWAQARY-ECIAISFMYGQRSTTELDAAKALTQR- 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVF 118
+H + L ++ S+LT N+A+ Q +P T+VP RN IFL +
Sbjct: 57 ----------ADVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSY 106
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A IVIG+ DYSGYPDCR + I A L ++ V TPL+
Sbjct: 107 ALAAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLL 166
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K +L + G + ++ +CY G C C +C LR++G++E
Sbjct: 167 HLSKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIE 215
Query: 234 FK 235
Sbjct: 216 AG 217
>gi|71065331|ref|YP_264058.1| ExsB family transcriptional regulator [Psychrobacter arcticus
273-4]
gi|71038316|gb|AAZ18624.1| probable ExsB protein [Psychrobacter arcticus 273-4]
Length = 285
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 79/253 (31%), Positives = 124/253 (49%), Gaps = 42/253 (16%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + K+ +A++L SGG DS TCL WA R+ V +SFDYGQR+ EL +
Sbjct: 46 NELHKSQNAVVLLSGGLDSVTCLYWAKARYASVTAVSFDYGQRHNSELIAAKAIA----- 100
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM---------------KIQDNNLPNTF 107
++ G +H + + + SSLT + + +I ++ +PNT+
Sbjct: 101 ------ETAGVNHRIIDIDIAQLGGSSLTDHSMIVPDGDTDKFPDKKRDEIDNDAIPNTY 154
Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---- 163
VP RN IFL +A +A +IVIGV DYSGYPDCR + I A + NL +
Sbjct: 155 VPARNTIFLSYALAVAEVTDSNHIVIGVSSVDYSGYPDCRPEYIAAFQHMANLATKAGVT 214
Query: 164 -SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCP 222
H+++ TPL L K +T +L +G + ++ +CY G+ C C
Sbjct: 215 GHHLSIQTPLQQLSKAKTIELGLSLG------VDYGQTISCYQAD-----ANGFACGVCD 263
Query: 223 ACYLRQKGWMEFK 235
+C LR++G+ +
Sbjct: 264 SCALRRQGFAQAG 276
>gi|77163687|ref|YP_342212.1| ExsB [Nitrosococcus oceani ATCC 19707]
gi|254435905|ref|ZP_05049412.1| exsB protein [Nitrosococcus oceani AFC27]
gi|110816236|sp|Q3JER4|QUEC_NITOC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|76882001|gb|ABA56682.1| preQ(0) biosynthesis protein QueC [Nitrosococcus oceani ATCC 19707]
gi|207089016|gb|EDZ66288.1| exsB protein [Nitrosococcus oceani AFC27]
Length = 224
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AP A++L SGG DS+T L+ A ++ TLSF+YGQR++VEL+ + +++ + K
Sbjct: 3 APKAVVLVSGGLDSATVLAIAREQEFICHTLSFNYGQRHRVELQAAAEISRRMGAVEHKR 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ L G + + + V + +P T+VP RN +FL FA A LG
Sbjct: 63 I-------TIDLGGFGGSALTDPSMAVP-EASSGAIPITYVPARNTVFLSFALGWAEVLG 114
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKKYETWK 182
+I IGV DYSGYPDCR I+A E L + PL+ L K E +
Sbjct: 115 AQDIFIGVNAVDYSGYPDCRPAFIKAFEHLAKLATCAGLEGRAFRIQAPLLHLSKAEIIR 174
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY + G C C +C R++G+ +
Sbjct: 175 EGMRLG------IDYSRTISCYQADEN-----GRACGVCDSCRFRKQGFWDAG 216
>gi|307611759|emb|CBX01467.1| hypothetical protein LPW_31551 [Legionella pneumophila 130b]
Length = 228
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSF YGQR+ EL + K + K
Sbjct: 2 KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGASDHKIV 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L +A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 62 -------TLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IG DYS YPDCR + I + ++ NL ++ + ++ PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++G + + +CY G C C +C R++G+
Sbjct: 175 GTELG------VDYGLTVSCYQANE-----AGEACGQCDSCTFRKRGFKSAG 215
>gi|118574287|sp|Q5ZRJ5|QUEC_LEGPH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 228
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSF YGQR+ EL + K + K
Sbjct: 2 KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGAADHKIV 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L +A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 62 -------TLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IG DYS YPDCR + I + ++ NL ++ + ++ PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++G + + +CY G C C +C R++G+
Sbjct: 175 GTELG------VDYGLTVSCYQANE-----AGEACGQCDSCTFRKRGFKSAG 215
>gi|254448701|ref|ZP_05062159.1| exsB protein [gamma proteobacterium HTCC5015]
gi|198261709|gb|EDY85996.1| exsB protein [gamma proteobacterium HTCC5015]
Length = 222
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 113/234 (48%), Gaps = 28/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DSST L+ A + TLSFDYGQRN+ EL + +++ +
Sbjct: 2 KKAVVLLSGGLDSSTVLALARAEGYQCHTLSFDYGQRNRAELVASKRLSEELGAV----- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRL 126
+H + L I S+LT + + + Q+ +P T+VP RN +FL A A L
Sbjct: 57 -----EHKIIQLDLRAIGGSALTDSRIDVPTQESEGVPVTYVPARNTVFLSIALGWAEVL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
++ IGV DYSGYPDCR + I A +T NL + +TVHTPL+ L K E
Sbjct: 112 EAYDVFIGVNAVDYSGYPDCRPEFIEAFQTMANLATKASTEGHPLTVHTPLIDLSKSEII 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G L + +CY G C C AC LR++G+ +
Sbjct: 172 QKGVAAG------LDYGLTVSCYDANE-----AGEACGQCDACRLRRQGFEAAE 214
>gi|262368583|ref|ZP_06061912.1| queuosine biosynthesis protein queC [Acinetobacter johnsonii SH046]
gi|262316261|gb|EEY97299.1| queuosine biosynthesis protein queC [Acinetobacter johnsonii SH046]
Length = 222
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 116/237 (48%), Gaps = 32/237 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P A++L SGG DS+TCL+WA ++D LSF YGQR+ EL+ + KK
Sbjct: 1 MRPRAIVLLSGGLDSTTCLAWAQAQYD-CTALSFMYGQRSTTELDAARELTKK------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLA 123
G +H + LG++ S+LT + ++ + D+ +P T+VP RN IFL +A A
Sbjct: 53 ----AGVEHRVINIDLGNLGGSALTDH-SIDVPDHEQVGIPVTYVPARNTIFLSYALAAA 107
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
L IVIG+ DYSGYPDCR + I A L + + TPL+ L K
Sbjct: 108 EVLDAEAIVIGINAVDYSGYPDCRPEFIEAFANMARLATKVGVEGKPLKFETPLLHLSKA 167
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+L + G + ++ +CY + G C C +C LR++G+ +
Sbjct: 168 NIIRLGIEHG------VDYSQTVSCYQAD-----DQGRACGKCDSCRLRKEGFADAG 213
>gi|54295711|ref|YP_128126.1| hypothetical protein lpl2799 [Legionella pneumophila str. Lens]
gi|81367596|sp|Q5WSS7|QUEC_LEGPL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|53755543|emb|CAH17042.1| hypothetical protein lpl2799 [Legionella pneumophila str. Lens]
Length = 228
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSF YGQR+ EL + K + K
Sbjct: 2 KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGAADHKIV 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L +A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 62 -------TLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IG DYS YPDCR + I + ++ NL ++ + ++ PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++G + + +CY G C C +C R++G+
Sbjct: 175 GAELG------VDYGLTVSCYQANE-----AGEACGQCDSCTFRKRGFKSAG 215
>gi|108758889|ref|YP_634541.1| exsB protein [Myxococcus xanthus DK 1622]
gi|118574291|sp|Q1CYI2|QUEC_MYXXD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|108462769|gb|ABF87954.1| exsB protein [Myxococcus xanthus DK 1622]
Length = 230
Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 112/240 (46%), Gaps = 32/240 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+TCL+ A + L+ YGQR+ VELE V +
Sbjct: 1 MVKRAVVLISGGLDSTTCLAMAKAKGFEPVCLAVAYGQRHAVELEQARKVAAAMG----- 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAA 120
D + L + S+LT ++ + + +P T+VP RN +FL A
Sbjct: 56 -----VTDFRVVSIDLRQVGGSALTADIEVPKDRPSDEMSHGIPVTYVPARNALFLSLAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
LA +G T+I IGV DYSGYPDCR + IR+ E+ NL + +H TVH PL L
Sbjct: 111 GLAEVVGSTDIYIGVNAVDYSGYPDCRPEFIRSFESMANLATKAGVEGAHFTVHAPLSGL 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + +G + +H+CY G C C +C LR+KG+ E
Sbjct: 171 TKADIIREGVKLG------VDYGLTHSCYDPD-----AQGRACGRCDSCVLRKKGFEEAG 219
>gi|52843081|ref|YP_096880.1| ExsB protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52630192|gb|AAU28933.1| ExsB protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 233
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSF YGQR+ EL + K + K
Sbjct: 7 KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGAADHKIV 66
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L +A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 67 -------TLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 119
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IG DYS YPDCR + I + ++ NL ++ + ++ PL +L K +T +L
Sbjct: 120 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 179
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++G + + +CY G C C +C R++G+
Sbjct: 180 GTELG------VDYGLTVSCYQANE-----AGEACGQCDSCTFRKRGFKSAG 220
>gi|296113092|ref|YP_003627030.1| ExsB family protein [Moraxella catarrhalis RH4]
gi|295920786|gb|ADG61137.1| ExsB family protein [Moraxella catarrhalis RH4]
gi|326560085|gb|EGE10475.1| ExsB family protein [Moraxella catarrhalis 46P47B1]
gi|326560468|gb|EGE10850.1| ExsB family protein [Moraxella catarrhalis 7169]
gi|326561671|gb|EGE12008.1| ExsB family protein [Moraxella catarrhalis 103P14B1]
gi|326570453|gb|EGE20493.1| ExsB family protein [Moraxella catarrhalis BC8]
gi|326573430|gb|EGE23398.1| ExsB family protein [Moraxella catarrhalis 101P30B1]
Length = 232
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 81/246 (32%), Positives = 120/246 (48%), Gaps = 37/246 (15%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +A++LFSGG DS+TCL WA +F V +SF YGQR+ EL + KK+
Sbjct: 1 MNNNQNAVVLFSGGLDSTTCLYWAKSQFKTVTAVSFCYGQRHSSELHAAQNIAKKLS--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK--------NVAMKIQDNN--LPNTFVPGRNII 114
H++ + I + S+LT + ++ D + P T+VP RN I
Sbjct: 58 -------VRHHVIDIDIAK-LGGSALTDMNLSVPNHDESVTYSDADQVAPITYVPARNTI 109
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVH 169
FL +A +A + I+IGV DYSGYPDCR D I A ET NL +H+++
Sbjct: 110 FLSYALAVAEVTQASAIIIGVSSVDYSGYPDCRPDYIAAFETMANLATVSGRQGNHLSII 169
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
PL L K +T L +G + + +CY G C C +C+LR++
Sbjct: 170 APLQNLSKADTLTLGISLG------VDYSMTVSCYQAD-----ALGRACGHCDSCHLRKQ 218
Query: 230 GWMEFK 235
G+M+ K
Sbjct: 219 GFMDAK 224
>gi|293609846|ref|ZP_06692148.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828298|gb|EFF86661.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123072|gb|ADY82595.1| queuosine biosynthesis protein QueC [Acinetobacter calcoaceticus
PHEA-2]
Length = 226
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 32/242 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ A++L SGG DS+TCL+WA R+ +SF YGQR+ EL+ + ++
Sbjct: 1 MEKNMRS--RAIVLLSGGLDSTTCLAWAQARY-ECIAISFMYGQRSTTELDAAKALAQR- 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVF 118
G +H + L ++ S+LT N+A+ Q +P T+VP RN IFL +
Sbjct: 57 ----------SGVEHRVINIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSY 106
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A IVIG+ DYSGYPDCR + I A L ++ V TPL+
Sbjct: 107 ALAAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLL 166
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K +L + G + ++ +CY G C C +C LR++G+++
Sbjct: 167 HLSKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFID 215
Query: 234 FK 235
Sbjct: 216 AG 217
>gi|152992854|ref|YP_001358575.1| ExsB family transcriptional regulator [Sulfurovum sp. NBC37-1]
gi|167016454|sp|A6Q9Q9|QUEC_SULNB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151424715|dbj|BAF72218.1| transcriptional regulator, ExsB family [Sulfurovum sp. NBC37-1]
Length = 222
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 28/232 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
A+ + SGG DS+ A + + L F+YGQR + ELEC + +++
Sbjct: 1 MGKKAVCIISGGMDSALSAKIAQEEGYEIIALHFNYGQRTRNKELECFRKITQEL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ E + + L I S+LT +V + + +P T+VP RN IFL AA +
Sbjct: 56 ----NASESYEIDLDFFEQIGASALTDKSIDVPIGGLEEGVPVTYVPFRNGIFLSIAAAI 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
A + G + IGV E D SGYPDCR I ++ AINLG E+++ + PL+ L+K +
Sbjct: 112 AEKHGAEALFIGVVEEDSSGYPDCRESYIEQMQKAINLGTKDETNIEIKMPLVSLRKSQI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ A ++G + LE++ +CY + C C +C LR +G+
Sbjct: 172 VQKAIELG------VPLEDTWSCYQAEDA-------ACGVCDSCRLRLRGFE 210
>gi|119504268|ref|ZP_01626348.1| ExsB protein [marine gamma proteobacterium HTCC2080]
gi|119459776|gb|EAW40871.1| ExsB protein [marine gamma proteobacterium HTCC2080]
Length = 221
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 24/231 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T L+ A + LSFDYGQR++ EL V ++ K
Sbjct: 2 KAVVLTSGGLDSATVLAMAHAAGRQCYALSFDYGQRHRAELSAAARVAASFEGIIHKTVS 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L L +G + + +V ++ +P T+VP RN +FL A A +G +
Sbjct: 62 -------LDLRGIGGSALTDDAIDVPVE-PTEGIPVTYVPARNTVFLSIALGWAEVIGAS 113
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKLA 184
I IGV DYSGYPDCR + I A + ++ + + TP++ L K E
Sbjct: 114 EIYIGVNAVDYSGYPDCRPEFIDAFGALAAVATKAGVEGDPIKICTPIIDLTKAEIIARG 173
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D+G + E++ +CY + G C C +C LR +G+ E
Sbjct: 174 MDLG------VDYEQTVSCYQASDE-----GKACGRCDSCRLRAQGFFEAG 213
>gi|326564201|gb|EGE14437.1| ExsB family protein [Moraxella catarrhalis 12P80B1]
gi|326565800|gb|EGE15962.1| ExsB family protein [Moraxella catarrhalis BC1]
gi|326571136|gb|EGE21160.1| ExsB family protein [Moraxella catarrhalis BC7]
gi|326575674|gb|EGE25597.1| ExsB family protein [Moraxella catarrhalis CO72]
gi|326577140|gb|EGE27034.1| ExsB family protein [Moraxella catarrhalis O35E]
Length = 232
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 81/246 (32%), Positives = 120/246 (48%), Gaps = 37/246 (15%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +A++LFSGG DS+TCL WA +F V +SF YGQR+ EL + KK+
Sbjct: 1 MNNNQNAVVLFSGGLDSTTCLYWAKSQFKTVTAVSFCYGQRHSSELHAAQNIAKKLS--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK--------NVAMKIQDNN--LPNTFVPGRNII 114
H++ + I + S+LT + ++ D + P T+VP RN I
Sbjct: 58 -------VRHHVIDIDIAK-LGGSALTDMNLSVPNHDESVTYSDADQVAPITYVPARNTI 109
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVH 169
FL +A +A + I+IGV DYSGYPDCR D I A ET NL +H+++
Sbjct: 110 FLSYALAVAEVTQASAIIIGVSSVDYSGYPDCRPDYIAAFETMANLATVSGRQGNHLSII 169
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
PL L K +T L +G + + +CY G C C +C+LR++
Sbjct: 170 APLQNLSKADTLTLGISLG------VDYSMTVSCYQAD-----ALGRACGHCDSCHLRRQ 218
Query: 230 GWMEFK 235
G+M+ K
Sbjct: 219 GFMDAK 224
>gi|152968323|ref|YP_001364107.1| exsB protein [Kineococcus radiotolerans SRS30216]
gi|189038919|sp|A6WGA4|QUEC_KINRD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151362840|gb|ABS05843.1| exsB protein [Kineococcus radiotolerans SRS30216]
Length = 229
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 72/241 (29%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LSF YGQR+ VEL+ V +
Sbjct: 1 MDRPAVVLLSGGLDSTTVLAIAKSQGFTPYALSFAYGQRHAVELDAARRVATALGAAG-- 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAA 120
H++ L S+LT ++A+ D ++P T+VP RN IFL +A
Sbjct: 59 --------HVIATIDLTVFGGSALTADIAVPKHDTVEDLQADIPITYVPARNTIFLSYAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
A +G +I IGV DYSGYPDCR + + A + L + V +H PLM +
Sbjct: 111 AYAEVVGAGDIFIGVNALDYSGYPDCRPEYVDAFQAMGRLATRAGVQGTELTIHAPLMQM 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + +G + + +CY G+ C C +C LR G+ E
Sbjct: 171 TKADIVRAGLALG------VDYGMTSSCYDPD-----AAGHPCGHCDSCLLRLNGFAEAG 219
Query: 236 E 236
Sbjct: 220 S 220
>gi|161830778|ref|YP_001597812.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 331]
gi|189038913|sp|A9NBS5|QUEC_COXBR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|161762645|gb|ABX78287.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 331]
Length = 226
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 113/237 (47%), Gaps = 29/237 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL +
Sbjct: 2 KKAVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHF-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ L+ +G + S+LT +V + ++P T+VP RN IFL A A
Sbjct: 54 -NVVRHEVVTLS-IGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEI 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYET 180
L +I+IG DYSGYPDCR + I A + NL + + + PL+ L K ET
Sbjct: 112 LDAESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAET 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
KL +G + + +CY + G C C +C LR+KG+ E + K
Sbjct: 172 IKLGYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 217
>gi|308061969|gb|ADO03857.1| ExsB trans-regulatory protein [Helicobacter pylori Cuz20]
gi|308063570|gb|ADO05457.1| ExsB trans-regulatory protein [Helicobacter pylori Sat464]
Length = 226
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 149/230 (64%), Gaps = 18/230 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+++L+++E+HTCY G+R + +GYGC CPAC LR+KG+ EF+ +
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCGECPACQLRKKGYEEFESNKK 226
>gi|148361198|ref|YP_001252405.1| ExsB protein [Legionella pneumophila str. Corby]
gi|296108534|ref|YP_003620235.1| hypothetical protein lpa_04195 [Legionella pneumophila 2300/99
Alcoy]
gi|167016432|sp|A5II59|QUEC_LEGPC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148282971|gb|ABQ57059.1| ExsB protein [Legionella pneumophila str. Corby]
gi|295650436|gb|ADG26283.1| hypothetical protein lpa_04195 [Legionella pneumophila 2300/99
Alcoy]
Length = 228
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSF YGQR+ EL + K + K
Sbjct: 2 KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMDAADHKIV 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 62 -------TLDTALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IG DYS YPDCR + I + ++ NL ++ + ++ PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++G + + +CY G C C +C R++G+
Sbjct: 175 GTELG------VDYGLTVSCYQANE-----AGEACGQCDSCTFRKRGFKSAG 215
>gi|110816246|sp|Q4FTN4|QUEC_PSYA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 259
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 79/253 (31%), Positives = 124/253 (49%), Gaps = 42/253 (16%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + K+ +A++L SGG DS TCL WA R+ V +SFDYGQR+ EL +
Sbjct: 20 NELHKSQNAVVLLSGGLDSVTCLYWAKARYASVTAVSFDYGQRHNSELIAAKAIA----- 74
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM---------------KIQDNNLPNTF 107
++ G +H + + + SSLT + + +I ++ +PNT+
Sbjct: 75 ------ETAGVNHRIIDIDIAQLGGSSLTDHSMIVPDGDTDKFPDKKRDEIDNDAIPNTY 128
Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---- 163
VP RN IFL +A +A +IVIGV DYSGYPDCR + I A + NL +
Sbjct: 129 VPARNTIFLSYALAVAEVTDSNHIVIGVSSVDYSGYPDCRPEYIAAFQHMANLATKAGVT 188
Query: 164 -SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCP 222
H+++ TPL L K +T +L +G + ++ +CY G+ C C
Sbjct: 189 GHHLSIQTPLQQLSKAKTIELGLSLG------VDYGQTISCYQAD-----ANGFACGVCD 237
Query: 223 ACYLRQKGWMEFK 235
+C LR++G+ +
Sbjct: 238 SCALRRQGFAQAG 250
>gi|88810548|ref|ZP_01125805.1| exsB protein [Nitrococcus mobilis Nb-231]
gi|88792178|gb|EAR23288.1| exsB protein [Nitrococcus mobilis Nb-231]
Length = 243
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 113/240 (47%), Gaps = 29/240 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ++ P A++L SGG DS+T L+ A + LSFDYGQR+ EL + K +
Sbjct: 1 MNERHPRAVVLLSGGLDSTTTLAIAQAQGFCCFALSFDYGQRHASELSAGTAIAKAM--- 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAM--KIQDNNLPNTFVPGRNIIFLVFAAT 121
S+ E +L + L D+ S+LT + K +P T+VP RN IFL +A
Sbjct: 58 ------SVAEHRVLRIG-LDDLGGSALTDVASPLPKPPSKGIPATYVPARNTIFLAYALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWL 175
A L +I IGV DYSGYPDCR + I A E NL +S + TPL+ L
Sbjct: 111 YAEVLQAHDIFIGVNAIDYSGYPDCRPEFITAFEHMANLATKSSAEDRSCYHISTPLIQL 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E + +G + + +CY + G C C ACY R KG+ +
Sbjct: 171 TKAEIIQCGARLG------VDYSITVSCYNADQ-----IGRACGRCDACYYRAKGFRQAG 219
>gi|15611649|ref|NP_223300.1| hypothetical protein jhp0582 [Helicobacter pylori J99]
gi|81555414|sp|Q9ZLJ7|QUEC_HELPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|4155143|gb|AAD06173.1| putative [Helicobacter pylori J99]
Length = 225
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 151/230 (65%), Gaps = 18/230 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G +++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 177 LG---VLDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQA 223
>gi|285019179|ref|YP_003376890.1| transcriptional regulator, exsb family protein [Xanthomonas
albilineans GPE PC73]
gi|283474397|emb|CBA16898.1| putative transcriptional regulator, exsb family protein
[Xanthomonas albilineans]
Length = 221
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 103/233 (44%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+A++L SGG DS+ ++ A + V LS YGQR+ EL+ V +
Sbjct: 2 KNAVVLLSGGMDSAVVVAIARAQGYAVHALSVRYGQRHTSELDAAARVASAL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
++ + + L I S+LT ++ + +P T+VP RN I L A A LG
Sbjct: 54 -NVVAHKTVNVD-LRSIGGSALTDDIEVPDAGGSGIPVTYVPARNTIMLSVALGWAEVLG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
+I GV DYSGYPDCR + I A +T N+ ++ V VH PL + K + +
Sbjct: 112 AADIFCGVNAVDYSGYPDCRPEFIDAFQTLANIATKAGVEGAGLRVHAPLQQMSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY G C C AC LR G+ E
Sbjct: 172 EGVRLG------VDFGLTVSCYRAD-----AAGRACGHCDACRLRAAGFAEAG 213
>gi|148244668|ref|YP_001219362.1| trans-regulatory protein ExsB [Candidatus Vesicomyosocius okutanii
HA]
gi|189029333|sp|A5CWP9|QUEC_VESOH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|146326495|dbj|BAF61638.1| trans-regulatory protein ExsB [Candidatus Vesicomyosocius okutanii
HA]
Length = 230
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 114/238 (47%), Gaps = 29/238 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A++L SGG DS+T L+ A + +LSFDYGQ+ + EL+ + K +
Sbjct: 5 KHKIKAVILLSGGLDSTTTLAIAKSKKFECYSLSFDYGQKQESELQSAKNIAKIFI---- 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+H + L IS S+LT + V Q N +P T+VP RN IFL +A
Sbjct: 61 ------TSEHRVVKISLSGISKSALTNDNIDVPKFSQSNKIPITYVPARNTIFLSYALAW 114
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
+ L +I IGV E DYSGYPDCR I+A E NL + + +HTPL+ L K
Sbjct: 115 SEVLNCQHIFIGVNELDYSGYPDCRKSYIKAFEIMANLATKQGIEGQKLTIHTPLIHLNK 174
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ K +G + + TCY ++ G C C AC R+ G+ E K
Sbjct: 175 AQIIKKGLSLG------IDYTLTTTCYQADKN-----GKACGICDACEYRKLGFKEAK 221
>gi|91776687|ref|YP_546443.1| ExsB [Methylobacillus flagellatus KT]
gi|118574290|sp|Q1GYT5|QUEC_METFK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91710674|gb|ABE50602.1| preQ(0) biosynthesis protein QueC [Methylobacillus flagellatus KT]
Length = 229
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L SGG DS+T L+ A + V LS DY QR++ EL+ V K + +M +
Sbjct: 1 MSKKAVVLLSGGLDSATVLAIARHQGYDVYCLSLDYQQRHRAELQAADRVTKALGAVMHR 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L L++ G + + + V ++ +P T+VP RN I L A A L
Sbjct: 61 TVK-------LDLSVFGGSALTDASIAVP-EVPSEGIPVTYVPARNTIMLSLALAWAEVL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
+I IGV DYSGYPDCR + + A + NL +S V +H PL+ + K +
Sbjct: 113 EARDIFIGVNALDYSGYPDCRGEYVHAFQAMANLATKSAVEGRTIAIHAPLIDMTKADIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY + G C C +C LR++G++
Sbjct: 173 TQGTSLG------VDYSLTVSCYQADDE-----GRACGVCDSCRLRRQGFVAAG 215
>gi|325279460|ref|YP_004252002.1| exsB protein [Odoribacter splanchnicus DSM 20712]
gi|324311269|gb|ADY31822.1| exsB protein [Odoribacter splanchnicus DSM 20712]
Length = 223
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 83/239 (34%), Positives = 118/239 (49%), Gaps = 34/239 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DSST L A + D + ++F+YGQ++ EL +
Sbjct: 2 KKAIVLLSGGLDSSTALYLAQSQGFDEIYAITFEYGQKHDKEL---------KSAIAIAK 52
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ E I+ L +L S +LT I+ ++P+T+VP RN++FL AA+ A
Sbjct: 53 AAGVKEHKIVNL-LLNQWSGCALTDPDMEVEDGHIERQDIPSTYVPARNMVFLSVAASWA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKK 177
L IT+I IGV E DYSGY DCR + I+A+E AINLG + +T+H P M L K
Sbjct: 112 DALDITDIFIGVSEVDYSGYVDCREEFIKAMENAINLGTVLGAEKKQRITIHAPFMHLTK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
E KL +G + + TCY G + C C +C LR K + E E
Sbjct: 172 AEEVKLGVSLG------VDFGLTWTCYRGGE-------HPCGVCDSCLLRAKAFAEANE 217
>gi|294626852|ref|ZP_06705444.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294665415|ref|ZP_06730703.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292598866|gb|EFF43011.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292604826|gb|EFF48189.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 224
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V
Sbjct: 2 KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAD---------A 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 53 QGVVAHKVVDVD-LRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVIG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 112 ANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY D G C C AC LR G+ +
Sbjct: 172 EGVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFADAG 213
>gi|15645263|ref|NP_207433.1| hypothetical protein HP0639 [Helicobacter pylori 26695]
gi|81341370|sp|O25356|QUEC_HELPY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|2313760|gb|AAD07701.1| conserved hypothetical protein [Helicobacter pylori 26695]
Length = 226
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 151/233 (64%), Gaps = 18/233 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IIPLDFLENITRSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G +++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ +
Sbjct: 177 LG---VLDLVIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQANKK 226
>gi|210134845|ref|YP_002301284.1| trans-regulatory protein ExsB [Helicobacter pylori P12]
gi|254764351|sp|B6JLM6|QUEC_HELP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|210132813|gb|ACJ07804.1| trans-regulatory protein ExsB [Helicobacter pylori P12]
Length = 228
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 149/231 (64%), Gaps = 18/231 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IISLDFLENITRSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G +++L+++E+HTCY G+R + +GYGC CPAC LR+KG+ EF+ K
Sbjct: 177 LG---VLDLVIKETHTCYQGERRILHAYGYGCGECPACQLRKKGYEEFQAK 224
>gi|93005607|ref|YP_580044.1| ExsB [Psychrobacter cryohalolentis K5]
gi|110816247|sp|Q1QCP3|QUEC_PSYCK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|92393285|gb|ABE74560.1| ExsB [Psychrobacter cryohalolentis K5]
Length = 259
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 79/253 (31%), Positives = 123/253 (48%), Gaps = 42/253 (16%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + K+ +A++L SGG DS TCL WA R+ V +SFDYGQR+ EL +
Sbjct: 20 NELHKSQNAVVLLSGGLDSVTCLYWAKARYASVTAVSFDYGQRHNSELVAAKAIA----- 74
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM---------------KIQDNNLPNTF 107
++ G +H + + + SSLT + + +I ++ +PNT+
Sbjct: 75 ------ETAGVNHRIIDIDIAQLGGSSLTDHSMIVPDGDTDKFPDKKRDEIDNDAIPNTY 128
Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---- 163
VP RN IFL +A +A +IVIGV DYSGYPDCR + I A + NL +
Sbjct: 129 VPARNTIFLSYALAVAEVTDSNHIVIGVSSVDYSGYPDCRPEYIAAFQHMANLATKAGVT 188
Query: 164 -SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCP 222
H+++ TPL L K +T +L +G + ++ +CY G C C
Sbjct: 189 GHHLSIQTPLQQLSKAKTIELGLSLG------VDYGQTISCYQAD-----ANGLACGVCD 237
Query: 223 ACYLRQKGWMEFK 235
+C LR++G+ +
Sbjct: 238 SCALRRQGFAQAG 250
>gi|34557973|ref|NP_907788.1| PP family ATPase [Wolinella succinogenes DSM 1740]
gi|81653435|sp|Q7M8H4|QUEC_WOLSU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|34483691|emb|CAE10688.1| ATPASE-PP-loop superfamily [Wolinella succinogenes]
Length = 233
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 140/232 (60%), Gaps = 18/232 (7%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
AL++FSGGQDS+TCL WA+ F VE ++FDYGQR+++E+E + +K+
Sbjct: 14 ALVVFSGGQDSTTCLGWAIKHFKSVEAITFDYGQRHRIEIEQSRLIAQKLG--------- 64
Query: 71 LGEDHILPLAILGDISHSSLTKN-----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ IL + + S+L + + +LP +FVP RN +F A A R
Sbjct: 65 -IKQFILEFDLFSKLGDSALLETSSDLKASPHRTKPHLPASFVPNRNALFFTLAHAYAQR 123
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+T+I+ G+ E DYSGYPDCR + I +E +NLG +S + PL+ K +T+ LA+
Sbjct: 124 EGLTHIITGISEADYSGYPDCREEFITHLERTLNLGSDSSILFAYPLLHRNKAQTFALAK 183
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ G +++L+LEESHTCY G R RYEWGYGC CPAC LR+KGW E++
Sbjct: 184 ECG---VLDLVLEESHTCYNGDRSHRYEWGYGCKECPACGLREKGWREYQAS 232
>gi|89094846|ref|ZP_01167779.1| ExsB [Oceanospirillum sp. MED92]
gi|89080901|gb|EAR60140.1| ExsB [Oceanospirillum sp. MED92]
Length = 227
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 34/250 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN A++L SGG DS+T L+ A DR LSFDYGQR+ EL + K++
Sbjct: 1 MN--TSAGKKAVVLLSGGLDSATALAMAADRGYDCYVLSFDYGQRSLTELNAAKEIAKQL 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQD-NNLPNTFVPGRNIIFLVF 118
+H + L D S+LT ++ + ++ +++P T+VP RN +FL
Sbjct: 59 NA----------REHRVIRLHLEDFGGSALTDHSIDVPEEETDDIPVTYVPARNTVFLSL 108
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLM 173
A A L +I IGV DYSGYPDCR + I A ET NL + + + TPL+
Sbjct: 109 ALGWAEVLEADSIFIGVNAVDYSGYPDCRPEYIAAFETMANLATKRGVNGDPIKIETPLI 168
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW-- 231
L K + +G + + +CY G C +C +C LR G+
Sbjct: 169 DLTKEAIIQEGTRLG------VDYGLTVSCYQADDS-----GRACGNCDSCRLRALGFTD 217
Query: 232 --MEFKEKYQ 239
+E +YQ
Sbjct: 218 AGLEDPTRYQ 227
>gi|46201268|ref|ZP_00055430.2| COG0603: Predicted PP-loop superfamily ATPase [Magnetospirillum
magnetotacticum MS-1]
Length = 229
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 107/238 (44%), Gaps = 32/238 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A L+F YGQR+ VE+ V +
Sbjct: 4 RPAIVLLSGGLDSATVLAIAKAEGFTPSALTFRYGQRHAVEIRAAERVAAALR------- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAATL 122
DH + L S+LT ++A+ + +P T+VP RN I L FA
Sbjct: 57 ---VSDHRVADIDLRVFGGSALTSDIAVPKGNLDEAIPEGIPVTYVPARNTIMLSFALAF 113
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
A LG +I +GV DYSGYPDCR D I+A E NL ++ V +HTPL+ L K
Sbjct: 114 AEVLGAADIFVGVNAVDYSGYPDCRPDYIKAFEAMANLATKAAVEGTRMTLHTPLIDLTK 173
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +G + + TCY G C C +C LR KG+ E
Sbjct: 174 ADIIRRGLALG------VDYSLTSTCYDPD-----PMGRACGHCDSCRLRLKGFAEAG 220
>gi|258516746|ref|YP_003192968.1| exsB protein [Desulfotomaculum acetoxidans DSM 771]
gi|257780451|gb|ACV64345.1| exsB protein [Desulfotomaculum acetoxidans DSM 771]
Length = 229
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+A+++ SGG DS+ C+++A R + ++F+YGQR+ E+ KKI +
Sbjct: 2 KNAVIILSGGMDSTVCMAYAGSREYNLYPITFNYGQRHAYEV----GQAKKIASYFQSNR 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ LA +I S+LT K + +P T+VP RN +FL A
Sbjct: 58 -----HLVVDLAFFREIGGSALTSEAIELPLNRTEKEIGSGIPITYVPFRNGVFLSLAVA 112
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWL 175
A + I IGV DYSGYPDCR + I A +T I+ G + + + TPL++
Sbjct: 113 YAEAVKAQAIFIGVNALDYSGYPDCRPEFIEAYQTVIDAGTKQASEDKQKLQIITPLLYK 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E K+ D+ L+ + +CY G+ C C +C LR KG+ E
Sbjct: 173 TKAEIVKMGMDLAA------PLQLTTSCYRGEE-------LACGRCDSCLLRLKGFSEAG 219
>gi|83313120|ref|YP_423384.1| PP-loop superfamily ATPase [Magnetospirillum magneticum AMB-1]
gi|110816230|sp|Q2W000|QUEC_MAGSA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|82947961|dbj|BAE52825.1| Predicted PP-loop superfamily ATPase [Magnetospirillum magneticum
AMB-1]
Length = 227
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A L+F YGQR+ VE+ V +
Sbjct: 2 KPAIVLLSGGLDSATVLAIAKAEGFAPAALTFRYGQRHAVEIRAAERVAAALG------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAATL 122
DH + L S+LT ++A+ + +P T+VP RN I L FA
Sbjct: 55 ---IRDHRIADIDLRVFGGSALTSDIAVPKGELDEAIPAGIPVTYVPARNTIMLSFALAF 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
A LG +I +GV DYSGYPDCR D I+A E NL ++ V +HTPL+ L K
Sbjct: 112 AEVLGAADIFVGVNAVDYSGYPDCRPDYIKAFEAMANLATKAAVEGTRLTIHTPLIDLTK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + D+G + + TCY D G C C +C LR KG+ E
Sbjct: 172 GQIIRRGLDLG------VDYSITSTCYDPTPD-----GKACGHCDSCRLRLKGFAEAG 218
>gi|261839533|gb|ACX99298.1| PP family ATPase [Helicobacter pylori 52]
Length = 226
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 151/233 (64%), Gaps = 18/233 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G ++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ +
Sbjct: 177 LGA---LDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGYEEFESHQK 226
>gi|262373097|ref|ZP_06066376.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262313122|gb|EEY94207.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 226
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 116/242 (47%), Gaps = 32/242 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + ++ A++L SGG DS TCL+WA +D LSF YGQR+ EL+ + ++
Sbjct: 1 MENNMRS--RAIVLLSGGLDSITCLAWAQANYD-CIALSFMYGQRSTTELDAAKALAQR- 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ-DNNLPNTFVPGRNIIFLVF 118
G +H + LG++ S+LT N+ + Q +P T+VP RN IFL +
Sbjct: 57 ----------AGVEHRVINIDLGNLGGSALTDHNIDVPEQLQEGIPVTYVPARNTIFLSY 106
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A A IVIGV DYSGYPDCR + I A L ++ V + TPL+
Sbjct: 107 ALAAAEVFDAEAIVIGVNAVDYSGYPDCRPEFIDAFANLARLATKAGVEGKPLKIETPLL 166
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K +L + G + ++ +CY G C C +C LRQ+G++E
Sbjct: 167 HLSKANIIRLGIEHG------VDYSKTVSCYQAD-----AQGRACGKCDSCRLRQQGFIE 215
Query: 234 FK 235
Sbjct: 216 AG 217
>gi|289661975|ref|ZP_06483556.1| ExsB protein [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289667005|ref|ZP_06488080.1| ExsB protein [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 224
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V
Sbjct: 2 KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAATRVAA---------A 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 53 QGVIAHKVVDVD-LRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 112 ANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY D G C C AC LR G+ +
Sbjct: 172 EGVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFADAG 213
>gi|86742063|ref|YP_482463.1| ExsB [Frankia sp. CcI3]
gi|110816226|sp|Q2J7K8|QUEC_FRASC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|86568925|gb|ABD12734.1| preQ(0) biosynthesis protein QueC [Frankia sp. CcI3]
Length = 236
Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 111/234 (47%), Gaps = 24/234 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
P+A++L SGG DS+T L+ A + LSF YGQR++VEL V + +
Sbjct: 14 RPAAVVLLSGGLDSATVLAIANQQGFACHALSFRYGQRHEVELAAARRVASALGVVRHVV 73
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D + L + G + + T V +P T+VP RN IFL F LA G
Sbjct: 74 VD-------IDLGVFGGSALTDPTIAVPAAGTAEEIPVTYVPARNTIFLSFGLALAETAG 126
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETW 181
++ IG DYSGYPDCR + + A + NL ++ V +VH PLM L K +T
Sbjct: 127 AWDVFIGASSVDYSGYPDCRPEYLAAYQAMANLATKATVSGERTLSVHAPLMHLSKADTI 186
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+L +G + +H+CY D G C C +C LR++G+ E
Sbjct: 187 RLGLSLG------VDYGLTHSCYDPGPD-----GRPCGRCDSCSLRERGFTEVG 229
>gi|87201149|ref|YP_498406.1| ExsB [Novosphingobium aromaticivorans DSM 12444]
gi|110816238|sp|Q2G3K1|QUEC_NOVAD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|87136830|gb|ABD27572.1| preQ(0) biosynthesis protein QueC [Novosphingobium aromaticivorans
DSM 12444]
Length = 233
Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 114/241 (47%), Gaps = 28/241 (11%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N AP A++L SGG DS C A ++ RV L+ DY QR++VEL+ + ++
Sbjct: 4 NSPAPDAPLAVVLLSGGLDSMVCAGLAQEQGFRVLALTIDYNQRHRVELDAARAIAARLG 63
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFA 119
E H++ L S+LT ++A+ +++P T+VP RN+IFL A
Sbjct: 64 ----------VERHVILPLDLRQFGGSALTADIAVPKDGVGDDIPVTYVPARNLIFLSLA 113
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMW 174
A G ++ IGV DYSGYPDCR + + E + + VTVH PL
Sbjct: 114 LAWAEAAGSKDLFIGVNALDYSGYPDCRPEFVAGFEDLARIATKVGSEGGTVTVHAPLQH 173
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LKK E + A +G + +S +CY D G C C +C LR+ G+ E
Sbjct: 174 LKKSEIAREAARLGLEAG------DSWSCYDPLPD-----GRACGVCDSCRLRRAGFEEA 222
Query: 235 K 235
Sbjct: 223 G 223
>gi|281358519|ref|ZP_06244999.1| exsB protein [Victivallis vadensis ATCC BAA-548]
gi|281315001|gb|EFA99034.1| exsB protein [Victivallis vadensis ATCC BAA-548]
Length = 225
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A T+SFDYGQR++ ELE + + +
Sbjct: 1 MNKRAVILLSGGLDSATVLAIAGSEGFDCYTMSFDYGQRHRCELEAAGRIAAALGAVKHN 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ L G + + V + +P T+VP RN+IFL FA A L
Sbjct: 61 TVK-------IDLRQWGGSALTDDALAVPDAEDSHGIPITYVPARNLIFLSFATAWAEVL 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETW 181
G +I IGV DYSGYPDCR I + + LG + H +++ PL L K E
Sbjct: 114 GARDIFIGVNSVDYSGYPDCRPKFIESFQETARLGTCAVDEGWHYSINAPLQNLSKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C +C LR G+ E
Sbjct: 174 RRGVALG------VDYGLTTSCYNPDSE-----GRSCGKCASCSLRIAGFREAG 216
>gi|317010860|gb|ADU84607.1| hypothetical protein HPSA_03020 [Helicobacter pylori SouthAfrica7]
Length = 225
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 151/230 (65%), Gaps = 18/230 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G +++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 177 LG---VLDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGYEEFQA 223
>gi|326330125|ref|ZP_08196436.1| ExsB protein [Nocardioidaceae bacterium Broad-1]
gi|325951938|gb|EGD43967.1| ExsB protein [Nocardioidaceae bacterium Broad-1]
Length = 232
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 76/241 (31%), Positives = 116/241 (48%), Gaps = 33/241 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A D+ LSF YGQR+++EL
Sbjct: 1 MTKKAVVLLSGGLDSTTVLAIAKDQGYEPYALSFRYGQRHEIEL----------EAARRV 50
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAM-------KIQDNNLPNTFVPGRNIIFLVFA 119
+ + H+L L S+LT +V + ++ +++P T+VP RN +FL FA
Sbjct: 51 AEAAGVTRHVLCDIDLRVFGGSALTADVDVPKHGSADELASDDVPITYVPARNTVFLSFA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMW 174
A + T+I IGV DYSGYPDCR + I A E NL + + +HTPL+
Sbjct: 111 LAYAETIEATDIFIGVSALDYSGYPDCRPEYIAAYEQMANLATRAGIEGNRMKIHTPLIE 170
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L K +T ++ + +G + + +CY + G+ C C +C LR KG+ E
Sbjct: 171 LTKGQTVEIGKRLG------VDYSLTSSCYDPDAE-----GHPCGHCDSCLLRLKGFAEV 219
Query: 235 K 235
Sbjct: 220 G 220
>gi|215919333|ref|NP_821053.2| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 493]
gi|206584218|gb|AAO91567.2| queuosine biosynthesis protein [Coxiella burnetii RSA 493]
Length = 244
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL + + +
Sbjct: 20 KKAVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + LG + + + +V + ++P T+VP RN IFL A A L
Sbjct: 80 -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 132
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
+I+IG DYSGYPDCR + I A + NL + + + PL+ L K ET KL
Sbjct: 133 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 192
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +CY + G C C +C LR+KG+ E + K
Sbjct: 193 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 235
>gi|315586680|gb|ADU41061.1| transcription regulator ExsB [Helicobacter pylori 35A]
Length = 226
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 149/230 (64%), Gaps = 18/230 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ +
Sbjct: 180 ---LDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGYEEFESNQK 226
>gi|254779374|ref|YP_003057479.1| hypothetical protein HELPY_0732 [Helicobacter pylori B38]
gi|254001285|emb|CAX29262.1| Conserved hypothetical protein, putative trans-regulatory protein
[Helicobacter pylori B38]
Length = 228
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 150/231 (64%), Gaps = 18/231 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IISLDFLENITRSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G +++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 177 LG---VLDLVIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQAK 224
>gi|212219578|ref|YP_002306365.1| queuosine biosynthesis protein [Coxiella burnetii CbuK_Q154]
gi|212013840|gb|ACJ21220.1| queuosine biosynthesis protein [Coxiella burnetii CbuK_Q154]
Length = 244
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL + + +
Sbjct: 20 KKAVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + LG + + + +V + ++P T+VP RN IFL A A L
Sbjct: 80 -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 132
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
+I+IG DYSGYPDCR + I A + NL + + + PL+ L K ET KL
Sbjct: 133 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 192
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +CY + G C C +C LR+KG+ E + K
Sbjct: 193 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 235
>gi|209364301|ref|YP_001425481.2| queuosine biosynthesis protein [Coxiella burnetii Dugway 5J108-111]
gi|212213526|ref|YP_002304462.1| queuosine biosynthesis protein [Coxiella burnetii CbuG_Q212]
gi|207082234|gb|ABS77553.2| queuosine biosynthesis protein [Coxiella burnetii Dugway 5J108-111]
gi|212011936|gb|ACJ19317.1| queuosine biosynthesis protein [Coxiella burnetii CbuG_Q212]
Length = 244
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL + + +
Sbjct: 20 KKAVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + LG + + + +V + ++P T+VP RN IFL A A L
Sbjct: 80 -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 132
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
+I+IG DYSGYPDCR + I A + NL + + + PL+ L K ET KL
Sbjct: 133 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 192
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +CY + G C C +C LR+KG+ E + K
Sbjct: 193 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 235
>gi|168702722|ref|ZP_02734999.1| exsB protein [Gemmata obscuriglobus UQM 2246]
Length = 230
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 110/238 (46%), Gaps = 33/238 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T L+ A + LS DYGQR++VELE V K + +
Sbjct: 3 KAVVLLSGGLDSTTALAVARGQGFECYALSVDYGQRHRVELERAAVVAKALGVI------ 56
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAATLA 123
+H L +I S+LT ++A+ + +P T+VP RN I L A A
Sbjct: 57 ----EHRTVKLDLREIGGSALTSDLAVPKDRSDGEMGHGVPVTYVPARNTILLGVALGFA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKK 177
+G +I IG DYSGYPDCR + + A E NL + VH+PL+ L K
Sbjct: 113 EVVGAFDIFIGANVLDYSGYPDCRPEFLSAFEALANLATKAGTEGAGRFRVHSPLLKLTK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + +G + ++ +CY G C C +C LR+KG+ E
Sbjct: 173 AEIIREGVKLG------VDYAQTLSCYDPD-----AAGRACGRCDSCLLRKKGFAEAG 219
>gi|15838456|ref|NP_299144.1| transcriptional regulator [Xylella fastidiosa 9a5c]
gi|9106947|gb|AAF84664.1|AE004007_3 transcriptional regulator [Xylella fastidiosa 9a5c]
Length = 254
Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + +
Sbjct: 26 KKAVVLLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARVL-------- 77
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
++ ++ + L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 78 -NVAAHKVVDVD-LRSIGGSALTDDIEIPDAGGKGIPVTYVPARNTIMLSLALGWAEVIG 135
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
+I GV DYSGYPDCR I A ET NL + V VH PL +L K E
Sbjct: 136 AADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVH 195
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
L + + +CY D G C C AC LR G+ +
Sbjct: 196 EGV------LHGVDFGLTVSCYRADVD-----GRACGRCDACKLRAAGFADAG 237
>gi|308184425|ref|YP_003928558.1| hypothetical protein HPSJM_03245 [Helicobacter pylori SJM180]
gi|308060345|gb|ADO02241.1| hypothetical protein HPSJM_03245 [Helicobacter pylori SJM180]
Length = 225
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 151/230 (65%), Gaps = 18/230 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLGFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G +++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+
Sbjct: 177 LG---VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGFEEFQA 223
>gi|54298878|ref|YP_125247.1| hypothetical protein lpp2945 [Legionella pneumophila str. Paris]
gi|81369632|sp|Q5X101|QUEC_LEGPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|53752663|emb|CAH14098.1| hypothetical protein lpp2945 [Legionella pneumophila str. Paris]
Length = 228
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSF YGQR+ EL + K + K
Sbjct: 2 KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGAADHKIV 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L A+ G + + + V + +P T+VP RN IFL A A +G
Sbjct: 62 -------TLDTALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IG DYS YPDCR + I + ++ NL ++ + ++ PL +L K + +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQAIQL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++G + + +CY G C C +C R++G+
Sbjct: 175 GTELG------VDYGLTVSCYQANE-----AGEACGQCDSCTFRKRGFKSAG 215
>gi|110816223|sp|Q83A28|QUEC_COXBU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 226
Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL + + +
Sbjct: 2 KKAVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + LG + + + +V + ++P T+VP RN IFL A A L
Sbjct: 62 -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
+I+IG DYSGYPDCR + I A + NL + + + PL+ L K ET KL
Sbjct: 115 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +CY + G C C +C LR+KG+ E + K
Sbjct: 175 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 217
>gi|118474384|ref|YP_891314.1| ExsB protein [Campylobacter fetus subsp. fetus 82-40]
gi|261886302|ref|ZP_06010341.1| ExsB protein [Campylobacter fetus subsp. venerealis str. Azul-94]
gi|189038902|sp|A0RM81|QUEC_CAMFF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118413610|gb|ABK82030.1| ExsB protein [Campylobacter fetus subsp. fetus 82-40]
Length = 223
Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
+ A+ + SGG DS+ A + + L FDY QR E EC + +
Sbjct: 1 MVNLKKAVCVISGGMDSALAAYKAKNSGYEIVALHFDYNQRTMNKERECFNLICDDL--- 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + IL + + I ++LT N+ N+P T+VP RN IFL AA
Sbjct: 58 ------DVEKRFILDVGFIAQIGGNALTDKTLNIPKDGISENIPITYVPFRNGIFLSIAA 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYE 179
LA + G I IGV E D SGYPDC I +I AINLG ++++ + TPL+ L K +
Sbjct: 112 ALAQKEGCEAIYIGVVEEDSSGYPDCTEQFINSINKAINLGTADNNIVIKTPLVHLSKGD 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K A + + LE + +CY + C +C +C LR KG+ E K
Sbjct: 172 IVKEASSL------KVPLELTWSCYENSE-------FACGTCDSCRLRLKGFKEAK 214
>gi|194366887|ref|YP_002029497.1| exsB protein [Stenotrophomonas maltophilia R551-3]
gi|254764386|sp|B4ST23|QUEC_STRM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194349691|gb|ACF52814.1| exsB protein [Stenotrophomonas maltophilia R551-3]
Length = 221
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 103/233 (44%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V K
Sbjct: 2 KKAVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELDAAARVAK---------A 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + L I S+LT ++ + +P T+VP RN I L A A LG
Sbjct: 53 QGVIAHKTVDVD-LRSIGGSALTDDIDVPEAGGAGIPVTYVPARNTIMLSLALGWAEVLG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
+I GV DYSGYPDCR + + A + NL + + + VH PL +L K +
Sbjct: 112 ANDIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIKVHAPLQFLSKGQIVS 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY G C+ C AC LR +G+ E
Sbjct: 172 EGVRLG------VDFGLTVSCYNAD-----ANGAACSHCDACRLRAQGFTEAG 213
>gi|332673487|gb|AEE70304.1| transcription regulator ExsB [Helicobacter pylori 83]
Length = 226
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 151/233 (64%), Gaps = 18/233 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVYLVGFDYVQKHFVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIENALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G ++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ +
Sbjct: 177 LGA---LDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFESNQK 226
>gi|164685855|ref|ZP_01945726.2| queuosine biosynthesis protein QueC [Coxiella burnetii 'MSU Goat
Q177']
gi|189038912|sp|A9KDD3|QUEC_COXBN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|164601372|gb|EAX33605.2| queuosine biosynthesis protein QueC [Coxiella burnetii 'MSU Goat
Q177']
Length = 226
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL + + +
Sbjct: 2 KKAVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + LG + + + +V + ++P T+VP RN IFL A A L
Sbjct: 62 -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
+I+IG DYSGYPDCR + I A + NL + + + PL+ L K ET KL
Sbjct: 115 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +CY + G C C +C LR+KG+ E + K
Sbjct: 175 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 217
>gi|270158200|ref|ZP_06186857.1| queuosine biosynthesis protein QueC [Legionella longbeachae D-4968]
gi|289163542|ref|YP_003453680.1| transcriptional regulator ExsB [Legionella longbeachae NSW150]
gi|269990225|gb|EEZ96479.1| queuosine biosynthesis protein QueC [Legionella longbeachae D-4968]
gi|288856715|emb|CBJ10526.1| putative transcriptional regulator ExsB [Legionella longbeachae
NSW150]
Length = 226
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 23/229 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + +SF YGQR+ EL + K +K
Sbjct: 2 KKAVILLSGGLDSTTCLALAASKGFACYAISFSYGQRHSAELFAAQRIAKH-------YK 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ L + + + + + +V + + +P T+VP RN IFL A A +G
Sbjct: 55 AKTHQIVTLDTELFHNSALTDPSVDVPDFKEGSEIPVTYVPARNTIFLSMALGFAESIGA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
+I IG DYS YPDCR + I A +T NL ++ V T+H PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFISAFQTLANLATKAGVTGDSFTIHAPLQYLSKVQTIQL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + + +CY G C C +C R++G++
Sbjct: 175 GISLG------VDYSLTVSCYQANE-----AGEACGQCDSCTFRKRGFI 212
>gi|255020131|ref|ZP_05292201.1| Queuosine Biosynthesis QueC ATPase [Acidithiobacillus caldus ATCC
51756]
gi|254970424|gb|EET27916.1| Queuosine Biosynthesis QueC ATPase [Acidithiobacillus caldus ATCC
51756]
Length = 228
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 24/237 (10%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +A++L SGG DS+T L+ A + + LSFDYGQR+ EL+ +K+ E
Sbjct: 1 MGDSEKAAIVLLSGGLDSATVLAIAREAGFALHALSFDYGQRHATELQ----FARKLAEA 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + L I G + + V + +P T+VP RN +FL +A LA
Sbjct: 57 AGVRSHRVLK---MDLRIFGASALTDERIAVPEEPAAAGIPITYVPARNTLFLSYALALA 113
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKK 177
LG+ +I IGV DYSGYPDCR + I+ + + +++H PL +L K
Sbjct: 114 EVLGVLDIFIGVNSQDYSGYPDCRPEFIQRFQELAQVATVLGTEKGQKLSIHAPLQYLSK 173
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ + ++G + + +CY G C C +C LR G+ E
Sbjct: 174 AQIIRRGLELG------VDYAHTRSCYQ-----LDTQGRSCGRCDSCRLRLAGFAEL 219
>gi|297539672|ref|YP_003675441.1| exsB protein [Methylotenera sp. 301]
gi|297259019|gb|ADI30864.1| exsB protein [Methylotenera sp. 301]
Length = 230
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +A++L SGG DS+TCL+ A + LS DY QR+ EL V +
Sbjct: 3 NKTKKNAVVLLSGGLDSATCLAIAKSQGFDCYCLSLDYHQRHIAELHAAKNVANVMGAAA 62
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
K + L L++ G + + V + + +P T+VP RN I L A A
Sbjct: 63 HKTAN-------LDLSLFGGSALTDDAIAVP-ESETAGIPITYVPARNTIMLSLALAWAE 114
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
L +I IGV DYSGYPDCR + ++A + NL + +T+H PL+ + K +
Sbjct: 115 VLKSQDIFIGVNALDYSGYPDCRGEYVKAFQAMANLATKSAVEGHAITIHAPLIDMTKAQ 174
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
L ++G + + +CY G C C +C LR++G+
Sbjct: 175 IVTLGTELG------VDYAMTVSCYQAD-----SHGEACGLCDSCRLRREGFAAAG 219
>gi|94500712|ref|ZP_01307242.1| putative regulator protein [Oceanobacter sp. RED65]
gi|94427267|gb|EAT12247.1| putative regulator protein [Oceanobacter sp. RED65]
Length = 220
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++++SGG DS T L+ + V L+F+YGQ++ E+E V +++
Sbjct: 3 QEKAVVIYSGGMDSFTLLNKVVKEGYDVYALTFNYGQKHVKEVEVAKTVCQQLN------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
IL ++ + ++ SS + N+ +T VP RN+I L A A
Sbjct: 57 ----VPHKILDISPINELMQSSSLVGSEEVPEGHYEAENMKSTVVPNRNMILLSLAIGYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + + G D++ YPDCR + + A+ + HV++ TP + K E K
Sbjct: 113 VDIKASKVYYGAHSGDHAIYPDCRPEFVHAMNAVAGIANYEHVSIETPYLNSSKGEILKD 172
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G L E + TCY G+ C C AC R + + E +
Sbjct: 173 GLSMG------LSYEHTWTCYNGREK-------ACGKCGACVERLEAFEENQA 212
>gi|123967115|ref|YP_001012196.1| ATPase [Prochlorococcus marinus str. MIT 9515]
gi|167016445|sp|A2BZ78|QUEC_PROM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|123201481|gb|ABM73089.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9515]
Length = 224
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 80/242 (33%), Positives = 122/242 (50%), Gaps = 30/242 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ SA++L SGG DSST A ++ LSFDYGQR+K EL L + K
Sbjct: 4 ENKSAVILLSGGLDSSTVTGLAKASKAKIFGLSFDYGQRHKKELNSALTIAKHFA----- 58
Query: 67 WKDSLGEDHI--LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
+ E I L L++ G S + K++ ++ +Q N +PNT+VPGRN IF+ A + A
Sbjct: 59 ----IEEFKIVKLDLSLWGGSSLTDTKKDLPIEGVQLNTIPNTYVPGRNTIFISVALSYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKKY 178
+ I +GV DYSGYPDCR D I+ + L ++ + + TPL+ L K
Sbjct: 115 EAINADLIGLGVNALDYSGYPDCRPDYIKKFQELAYLANKRGREDNPIKLWTPLIDLNKE 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+ +LA D N+ LE++ +CY G C C +C +RQ + +++ K
Sbjct: 175 DIIQLAFD------HNVPLEKTWSCYSGNLKP-------CGKCDSCRIRQTAYKKWQIKQ 221
Query: 239 QD 240
+
Sbjct: 222 NE 223
>gi|317180475|dbj|BAJ58261.1| ExsB trans-regulatory protein [Helicobacter pylori F32]
Length = 226
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 151/233 (64%), Gaps = 18/233 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKNSNNLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G ++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ +
Sbjct: 177 LGA---LDLIIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFESHQK 226
>gi|94495451|ref|ZP_01302031.1| ExsB [Sphingomonas sp. SKA58]
gi|94424839|gb|EAT09860.1| ExsB [Sphingomonas sp. SKA58]
Length = 233
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 28/239 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ++ A++L SGG DS + A + R+ LS DY QR++VEL V + + +
Sbjct: 2 VARQEKFAVVLLSGGLDSMVAGALAREAGYRLFALSIDYNQRHRVELRAAARVAQALNAI 61
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAAT 121
HI+ L S+LT ++A+ +++P T+VP RN IFL
Sbjct: 62 R----------HIVLPLDLTAFGGSALTADIAVPKSGVGSDIPVTYVPARNTIFLSLTLG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLK 176
LA G ++I IGV DYSGYPDCR + I A + L ++ + ++TPL ++
Sbjct: 112 LAEVAGASDIFIGVNALDYSGYPDCRPEFIDAFQKMATLATKAGVEGHPIRINTPLQYMT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + A +G + S +CY D G C C +C LR KG+ E
Sbjct: 172 KADIAREADRLGLDAGI------SWSCYDPTPD-----GKHCGLCDSCRLRSKGYQEAG 219
>gi|254468087|ref|ZP_05081493.1| exsB protein [beta proteobacterium KB13]
gi|207086897|gb|EDZ64180.1| exsB protein [beta proteobacterium KB13]
Length = 227
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 24/236 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L SGG DS T L+ A + L YGQR+ E + + KK
Sbjct: 1 MSKKAIVLLSGGLDSLTTLAIAQNDGFDCYALHVIYGQRHSSETKAARNIAKK------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + ++ L + ++ + + + +P T+VP RN I + FAA A L
Sbjct: 54 YNLAEFREINVDMSWLKSSALTNHDMTIPEERSE-GIPVTYVPARNTIMMSFAAAWAESL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
I+++ +GV DYSGYPDCR + I A + +NLG ++ + +HTPL+ L K E
Sbjct: 113 AISHLFLGVNAVDYSGYPDCRPEFIDAFKKMVNLGTKAAIEGTPFNIHTPLIGLTKDEII 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + S +CY ++ G C C +CYLR++G+ + K
Sbjct: 173 TKGCNLG------VDYSMSISCYQADQN-----GNACGRCDSCYLRRQGFEKAGIK 217
>gi|219850958|ref|YP_002465390.1| exsB protein [Methanosphaerula palustris E1-9c]
gi|254764360|sp|B8GJL3|QUEC_METPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|219545217|gb|ACL15667.1| exsB protein [Methanosphaerula palustris E1-9c]
Length = 221
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 104/233 (44%), Gaps = 29/233 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWK 68
A+ L SGG DSST A D + L +YGQR + EL+ + + +
Sbjct: 2 KAVCLLSGGMDSSTLAYVAKDMGYHIHALHLNYGQRTEKKELQSATAIARSL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNN---LPNTFVPGRNIIFLVFAATLAY 124
S E L L SSLT + + + D N LPNT+VP RN L A + A
Sbjct: 54 -SAEEFIPLDLGYFKAFGKSSLTDPAIDVDVFDENRPELPNTYVPFRNANLLSIATSFAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWK 182
I IGV DYSGYPDCR I+A + ++LG +H+ + TP + L K + +
Sbjct: 113 SRDADAIFIGVQALDYSGYPDCRPAFIQAFQQVMDLGTADGTHIDLLTPFIGLTKTDILR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
D+G + E + +CY + C C +C+ RQK + E
Sbjct: 173 KGLDLG------VPYEHTWSCYQNEEK-------ACGVCGSCHFRQKAFAELG 212
>gi|261838120|gb|ACX97886.1| ExsB trans-regulatory protein [Helicobacter pylori 51]
Length = 226
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 152/233 (65%), Gaps = 18/233 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 IISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L K+ Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKSSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G +++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ +
Sbjct: 177 LG---ILDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFESHQK 226
>gi|226228043|ref|YP_002762149.1| queuosine biosynthesis protein QueC [Gemmatimonas aurantiaca T-27]
gi|226091234|dbj|BAH39679.1| queuosine biosynthesis protein QueC [Gemmatimonas aurantiaca T-27]
Length = 238
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 103/241 (42%), Gaps = 33/241 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T L+ A ++F YGQR+ E+E
Sbjct: 11 ERPAVVLLSGGLDSATALAVARRDGFTPYAMTFRYGQRHAGEIEA----------ARRVA 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLVFAAT 121
H++ L S+LT +V + + +P T+VP RN IFL FA
Sbjct: 61 AAQQAARHVVVDIDLRQWGGSALTSDVEVPKDRDVDEVTDEIPVTYVPARNTIFLSFALA 120
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWL 175
A LG I IGV DYSGYPDCR + + A ET NL + V +H PL L
Sbjct: 121 WAETLGADAIFIGVNALDYSGYPDCRPEYVAAFETMANLATRAGVEGTQRLTIHAPLQHL 180
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + L + +G + + +CY D G C C AC LR +G+ E
Sbjct: 181 TKAQIVTLGRSLG------VDYSLTTSCYDPAPD-----GTACGHCDACQLRLRGFAEAG 229
Query: 236 E 236
Sbjct: 230 A 230
>gi|257453857|ref|ZP_05619135.1| ExsB protein [Enhydrobacter aerosaccus SK60]
gi|257448784|gb|EEV23749.1| ExsB protein [Enhydrobacter aerosaccus SK60]
Length = 236
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 117/244 (47%), Gaps = 38/244 (15%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ +A++L SGG DS TCL WA + V +SF+YGQR+ EL +
Sbjct: 7 SQNAVVLLSGGLDSVTCLYWAKANYTNVTAVSFNYGQRHNSELNAAKKIA---------- 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTK-----------NVAMKIQDNNLPNTFVPGRNIIFL 116
+ I+ + L + S+LT + + ++++P T+VP RN IFL
Sbjct: 57 ATAQVNHRIIDID-LAQLGGSALTDASLVVPDAKQTDFSDNQHNDSIPITYVPARNTIFL 115
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTP 171
+A LA IVIGV DYSGYPDCR + I A E NL + +H+ + TP
Sbjct: 116 SYALALAEVTQSNTIVIGVNAVDYSGYPDCRPEYIEAFEKMANLATKAGVMGNHLHIATP 175
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ L K E KL +G + + +CY + G C C +CYLRQ+G+
Sbjct: 176 LLHLSKAEIIKLGVSLG------VDYALTVSCYRADSE-----GRACAHCDSCYLRQQGF 224
Query: 232 MEFK 235
++ +
Sbjct: 225 LQAE 228
>gi|253997440|ref|YP_003049504.1| exsB protein [Methylotenera mobilis JLW8]
gi|253984119|gb|ACT48977.1| exsB protein [Methylotenera mobilis JLW8]
Length = 226
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A++L SGG DS+T L++A + LS DY QR+ EL+ V K + K
Sbjct: 1 MTKNAVVLLSGGLDSATVLAYARSQGFECYCLSLDYHQRHIAELQAAKNVAKVMGAAAHK 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L L++ G + + V + + +P T+VP RN I L A A L
Sbjct: 61 TAQ-------LDLSLFGGSALTDDAIAVPVSATE-GIPITYVPARNTIMLSLALAWAEVL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
+I IGV DYSGYPDCR + ++A + NL +S V +H PL+ + K +
Sbjct: 113 QAQDIFIGVNALDYSGYPDCRGEYVKAFQDMANLATKSAVEGKTITIHAPLIDMTKAQIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L ++G + + +CY + G C C +C LR+ G+
Sbjct: 173 TLGTELG------VDYAMTVSCYQADSE-----GEACGLCDSCRLRRDGF 211
>gi|165924029|ref|ZP_02219861.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 334]
gi|165916514|gb|EDR35118.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 334]
Length = 226
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A + LSFDYGQ++ EL + + +
Sbjct: 2 KKAVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + LG + + + +V + ++P T+VP RN IFL A A L
Sbjct: 62 -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
+I+IG DYSGYPDCR + I A + NL + + + PL+ L K ET KL
Sbjct: 115 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATQRGIEGHSIKIEAPLIHLSKAETIKL 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +CY + G C C +C LR+KG+ E + K
Sbjct: 175 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 217
>gi|284053643|ref|ZP_06383853.1| exsB protein [Arthrospira platensis str. Paraca]
gi|291569828|dbj|BAI92100.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 226
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-------VRKKIVE 62
A++L SGG DSST L A LSF+Y QR+ ELE + VE
Sbjct: 2 KAVILLSGGLDSSTVLYQAKADGYECYALSFNYQQRHLRELEAAAKIAQAAGVAAHQTVE 61
Query: 63 L-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ +W S D + L ++ S T +P T+VP RN IFL FA
Sbjct: 62 FDLKRWGGSALTDDNIDLPCDRTLAEMSAT-----------IPITYVPARNTIFLSFALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLK 176
+G I IGV DYSGYPDCR D I A+++ LG + + +T++TPL+ LK
Sbjct: 111 YGEAIGADRIYIGVNALDYSGYPDCRPDYIVAMQSVFRLGTKQGREGNPITINTPLIDLK 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + +L +G + E + +CY G+ + C C AC LR +
Sbjct: 171 KTDIIQLGNSLG------VPWEHTWSCYGGEAE-------ACGVCDACRLRLAAFQALG 216
>gi|71901606|ref|ZP_00683686.1| ExsB [Xylella fastidiosa Ann-1]
gi|71728616|gb|EAO30767.1| ExsB [Xylella fastidiosa Ann-1]
Length = 230
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + +
Sbjct: 2 KKAVILLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARAL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ ++ + L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 54 -NVVAHKVVDVD-LRSIGGSALTDDIEIPDAGGEGIPVTYVPARNTIMLSLALGWAEVIG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
+I GV DYSGYPDCR I A ET NL + V VH PL +L K E
Sbjct: 112 AADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVH 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
L + + +CY D G C C AC LR G+ +
Sbjct: 172 EGL------LHGVDFGLTVSCYRADVD-----GRACGRCDACKLRAAGFADAG 213
>gi|33862247|ref|NP_893808.1| ATPase [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|81575506|sp|Q7UZH5|QUEC_PROMP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33634465|emb|CAE20150.1| hypothetical ATPase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 224
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 82/241 (34%), Positives = 123/241 (51%), Gaps = 28/241 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMP 65
K SA++L SGG DSST A ++ LSFDYGQR+K EL+ + +E
Sbjct: 4 KNKSAVILLSGGLDSSTVTGLAKASKAKIFGLSFDYGQRHKKELDSAFTIANHFEIEEFK 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAY 124
K L L++ G S + + K++ + IQ N +PNT+VPGRN IF+ A + A
Sbjct: 64 IVK--------LDLSLWGGSSLTDIKKDLPIDGIQQNTIPNTYVPGRNTIFISVALSYAE 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKKYE 179
+ I +GV DYSGYPDCR D I+ + NL E+ + + TPL+ L K +
Sbjct: 116 AINADLIGLGVNALDYSGYPDCRPDYIKKFQELANLANKRGREENPIKLWTPLLDLNKED 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+LA D N+ LE++ +CY G + C C +C +RQ + +++ K
Sbjct: 176 IIQLAFD------NNVPLEKTWSCYSGNLEP-------CGKCDSCRIRQTAYKKWQIKKN 222
Query: 240 D 240
+
Sbjct: 223 E 223
>gi|254457915|ref|ZP_05071342.1| exsB protein [Campylobacterales bacterium GD 1]
gi|207085308|gb|EDZ62593.1| exsB protein [Campylobacterales bacterium GD 1]
Length = 224
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 77/235 (32%), Positives = 114/235 (48%), Gaps = 28/235 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVE 62
+ ++ AL + SGG DS+ + + L F+Y QR K ELEC KI E
Sbjct: 1 MNEQNKKALCVMSGGMDSTLSAYMMKNSGYEIIALHFNYNQRTQKKELECF----HKICE 56
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + E +IL L I S+LT V + + +P T+VP RN IFL A
Sbjct: 57 DL-----DVKEKYILDLDFFAQIGASALTDKSIEVPIGGIEEGVPVTYVPFRNGIFLSMA 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKK 177
A +A + G I IGV E D SGYPDCR I ++E +INLG E+++ + PL+ LKK
Sbjct: 112 AAVAEKEGANVISIGVVEEDSSGYPDCRESYINSMEQSINLGTKDETNIEIKMPLVHLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ + + ++ N+ L + +CY + C C +C LR G+
Sbjct: 172 SQIVQKSLEL------NVPLSLTWSCYKNEDK-------ACGVCDSCRLRLNGFK 213
>gi|148653563|ref|YP_001280656.1| exsB protein [Psychrobacter sp. PRwf-1]
gi|189038944|sp|A5WGB5|QUEC_PSYWF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148572647|gb|ABQ94706.1| exsB protein [Psychrobacter sp. PRwf-1]
Length = 256
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 79/249 (31%), Positives = 117/249 (46%), Gaps = 43/249 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A++L SGG DS TCL WA R+ +V +SF+YGQR+ EL +
Sbjct: 22 SQQNAVVLLSGGLDSVTCLYWAKARYAKVTAVSFNYGQRHNSELVAAKSIA--------- 72
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN---------------LPNTFVPGR 111
G +H + + + SSLT + M + D + +PNT+VP R
Sbjct: 73 --GQAGVNHKIIDIDIAQLGGSSLTDH-DMTVPDGDADKFPTHTDDIDNQAIPNTYVPAR 129
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----- 166
N IFL +A +A +IVIGV DYSGYPDCR + I A E NL ++ V
Sbjct: 130 NTIFLSYALAVAEVTDANHIVIGVSSVDYSGYPDCRPEYIEAFEVMANLATKAGVTGHKL 189
Query: 167 TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
+ TPL L K +T +L +G + ++ +CY + G C C +C L
Sbjct: 190 HIQTPLQKLSKAQTIQLGNSLG------VDYSQTISCYKADSE-----GRACGICDSCTL 238
Query: 227 RQKGWMEFK 235
R++G+ +
Sbjct: 239 RKRGFSDAG 247
>gi|71275956|ref|ZP_00652238.1| ExsB [Xylella fastidiosa Dixon]
gi|71901398|ref|ZP_00683490.1| ExsB [Xylella fastidiosa Ann-1]
gi|170730260|ref|YP_001775693.1| transcriptional regulator [Xylella fastidiosa M12]
gi|254764394|sp|B0U2I4|QUEC_XYLFM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|71163189|gb|EAO12909.1| ExsB [Xylella fastidiosa Dixon]
gi|71728831|gb|EAO30970.1| ExsB [Xylella fastidiosa Ann-1]
gi|167965053|gb|ACA12063.1| transcriptional regulator [Xylella fastidiosa M12]
Length = 230
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + +
Sbjct: 2 KKAVILLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARAL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ ++ + L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 54 -NVVAHKVVDVD-LRSIGGSALTDDIEIPDAGGEGIPVTYVPARNTIMLSLALGWAEVIG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
+I GV DYSGYPDCR I A ET NL + V VH PL +L K E
Sbjct: 112 AADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVH 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
L + + +CY D G C C AC LR G+ +
Sbjct: 172 EGL------LHGVDFGLTVSCYRADVD-----GRACGRCDACKLRAAGFADAG 213
>gi|126697220|ref|YP_001092106.1| ATPase [Prochlorococcus marinus str. MIT 9301]
gi|167016442|sp|A3PFI0|QUEC_PROM0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|126544263|gb|ABO18505.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9301]
Length = 224
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 30/241 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K S ++L SGG DSST A ++ LSFDYGQR+K EL + K
Sbjct: 4 KNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELNSASIIAKHF------ 57
Query: 67 WKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
+ E I+ L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A + A
Sbjct: 58 ---DIEEFKIIKLDLSLWGGSSLTDSQKNIPIEGVQANKIPNTYVPGRNTIFISVALSYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKY 178
+ I +GV DYSGYPDCR D I+ + +L + + + TPL+ L K
Sbjct: 115 EAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNKE 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
E KLA D ++ +++ +CY G C C +C +R + ++
Sbjct: 175 EIIKLAFD------NHVPFDKTWSCYSGNSKP-------CGKCDSCRIRNAAYEKWLNNK 221
Query: 239 Q 239
Sbjct: 222 N 222
>gi|123969433|ref|YP_001010291.1| ATPase [Prochlorococcus marinus str. AS9601]
gi|167016446|sp|A2BTS3|QUEC_PROMS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|123199543|gb|ABM71184.1| hypothetical ATPase [Prochlorococcus marinus str. AS9601]
Length = 224
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 30/242 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K S ++L SGG DSST A ++ LSFDYGQR+K EL + K
Sbjct: 1 MTLKNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELNSASIIAKHF--- 57
Query: 64 MPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAA 120
+ E I+ L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A
Sbjct: 58 ------DIDEFKIIKLDLSLWGGSSLTDTQKNIPIEGVQTNKIPNTYVPGRNTIFISVAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWL 175
+ A + I +GV DYSGYPDCR D I+ + +L + + + TPL+ L
Sbjct: 112 SYAEAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E KLA D ++ L+++ +CY G C C +C +R + ++
Sbjct: 172 NKEEIIKLAFD------NHVPLDKTWSCYSGNSKP-------CGKCDSCRIRNAAYEKWL 218
Query: 236 EK 237
Sbjct: 219 NN 220
>gi|315636553|ref|ZP_07891789.1| transcription regulator ExsB [Arcobacter butzleri JV22]
gi|315479202|gb|EFU69899.1| transcription regulator ExsB [Arcobacter butzleri JV22]
Length = 228
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 30/243 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKK 59
MN I A+ + SGG DS+ A + + F+YGQR + EL+ + +
Sbjct: 1 MNKI--STKKAICILSGGMDSTLSSYIAKKDGFEIIAVHFNYGQRTQNRELKAFKDICNE 58
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFL 116
+ + + + + I ++LT +V + +P T+VP RN IFL
Sbjct: 59 L---------DIKSKYEIDIPFFTQIGANALTDMSIDVPTSGLEAGVPITYVPFRNGIFL 109
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMW 174
A +A + G T + IGV + D SGYPDC + I+ ++ AIN G ++ + + TPL+
Sbjct: 110 AITAAIAEKEGATAMYIGVVQEDSSGYPDCTEEFIQDMKKAINQGTKEDTKIEIITPLVH 169
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L K + + A + N+ LE + +CY + + C C +C LR G+ +
Sbjct: 170 LSKAQIVQEAIKL------NVPLELTWSCYKEEEE-------ACGVCDSCRLRLNGFEQA 216
Query: 235 KEK 237
+K
Sbjct: 217 GKK 219
>gi|114330320|ref|YP_746542.1| exsB protein [Nitrosomonas eutropha C91]
gi|122941346|sp|Q0AJ94|QUEC_NITEC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|114307334|gb|ABI58577.1| preQ(0) biosynthesis protein QueC [Nitrosomonas eutropha C91]
Length = 226
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 23/229 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A LS DYGQR+ EL + + + ++
Sbjct: 2 KKAVVLLSGGLDSTTTLAIARGNGFACYALSVDYGQRHAAELAAATRIGQLLQVCEHQFL 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L L +L + + + V + + +P T+VP RN I L A A LG
Sbjct: 62 K-------LDLTVLASSALTDPSVTVPIHGTNRGIPATYVPARNTIMLSLALAWAEVLGS 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR D I A E NL ++ + VH PL+ L K++ +
Sbjct: 115 QDIFIGVTAVDYSGYPDCRPDYIDAFEKMANLATKAGREGNLLKVHAPLINLPKHDIIRR 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++G + + +CY G+ C C AC++R+ G+
Sbjct: 175 GLELG------IDYSMTVSCYQADAS-----GWACGQCDACHIRRAGFA 212
>gi|183219600|ref|YP_001837596.1| hypothetical protein LEPBI_I0175 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909739|ref|YP_001961294.1| PP-loop superfamily ATPase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|189038920|sp|B0S9S9|QUEC_LEPBA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764356|sp|B0SK77|QUEC_LEPBP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167774415|gb|ABZ92716.1| PP-loop superfamily ATPase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778022|gb|ABZ96320.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 248
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 85/254 (33%), Positives = 119/254 (46%), Gaps = 46/254 (18%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDR-------VETLSFDYGQRNKVELECRLCVRKK 59
+ A++L SGG DS+TCL A F + LSFDY Q++K+EL + K
Sbjct: 14 EKKGAIVLLSGGLDSTTCLYLAAKDFGYPKNKKLPLLALSFDYSQKHKIELTKSKKIAK- 72
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM---------KIQDNNLPNTFVPG 110
+LG H++ G SSLT++ + +PNT+VPG
Sbjct: 73 ----------TLGIKHVIQKLDPGFFLGSSLTESKIKVRKNAKSLFSGDETEIPNTYVPG 122
Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH----- 165
RNI+FL FA +LA G +I IGV DYSGYPDCR + I + + NLG +
Sbjct: 123 RNILFLSFALSLAEGHGYDSIYIGVNALDYSGYPDCRPEFIDSFQKMANLGTKKGVSGTG 182
Query: 166 --VTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPA 223
+ + TPL+ L K E +L +G L +H+CY G C C +
Sbjct: 183 DSIQIKTPLLHLGKKEIIELGMSVGA------PLGLTHSCYDPV------SGKPCGKCDS 230
Query: 224 CYLRQKGWMEFKEK 237
C LR KG++E K
Sbjct: 231 CILRAKGFLEVGLK 244
>gi|289207755|ref|YP_003459821.1| exsB protein [Thioalkalivibrio sp. K90mix]
gi|288943386|gb|ADC71085.1| exsB protein [Thioalkalivibrio sp. K90mix]
Length = 227
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 70/238 (29%), Positives = 105/238 (44%), Gaps = 28/238 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + A++L SGG DS+TCL+ A LS DYGQR++ EL+ V
Sbjct: 1 MSQPEKAVVLLSGGLDSATCLAMARADGLDCHALSIDYGQRHRTELDAARRVA------- 53
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQ-DNNLPNTFVPGRNIIFLVFAATL 122
+DH + L I S+LT + +A+ + +P T+VP RN +FL A L
Sbjct: 54 ---ASQGVQDHRVVRVDLTAIGGSALTDDAIAVPTEASEGIPVTYVPARNTVFLSLALGL 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKK 177
A L + +G DYSGYPDCR I A + + V V PLM + K
Sbjct: 111 AETLDARLLYVGANAVDYSGYPDCRPAFIDAFRDLAQVATRAGVEGVRWEVRAPLMHMSK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + +G + ++ +CY D G C C +C +R++G+
Sbjct: 171 AEIIRAGASLG------VDYAQTVSCYQADPD-----GRACGRCDSCRIRREGFAAAG 217
>gi|325981314|ref|YP_004293716.1| exsB protein [Nitrosomonas sp. AL212]
gi|325530833|gb|ADZ25554.1| exsB protein [Nitrosomonas sp. AL212]
Length = 225
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A + R LS DYGQRN EL + + + +
Sbjct: 2 KKAIVLLSGGLDSATTLAIAHGQGFRCYALSIDYGQRNFAELNAAQKIAQSLDSHKHQII 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ L G + + + V ++ +P T+VP RN I L A A L
Sbjct: 62 K-------IDLTAFGGSALTDQSIKVPTSGENPGIPVTYVPARNTIMLSLALAWAETLDC 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I GV DYSGYPDCR + I+A NL ++ V +HTPLM L K + +
Sbjct: 115 QDIFTGVNAVDYSGYPDCRAEYIQAFGIMANLATKASVEGKQLTIHTPLMLLSKQQIIQT 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + + +CY G C C +C +R+ G+
Sbjct: 175 GLALG------VDYSLTVSCYQADE-----AGQACGVCDSCRIRKAGFK 212
>gi|118594348|ref|ZP_01551695.1| hypothetical protein MB2181_01730 [Methylophilales bacterium
HTCC2181]
gi|118440126|gb|EAV46753.1| hypothetical protein MB2181_01730 [Methylophilales bacterium
HTCC2181]
Length = 228
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 30/240 (12%)
Query: 5 IKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+KK SA++L SGG DS+T L+ A + ++ +Y QR+ EL+ +
Sbjct: 1 MKKKVSKSAVILLSGGLDSATVLAIAKAEGYQCYAMNINYQQRHSAELKYAKRLAHHY-- 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM--KIQDNNLPNTFVPGRNIIFLVFAA 120
+ E ++ + L ++ SSLT + + +P+T+VP RN I + A
Sbjct: 59 -------DVEEYKVVDID-LSWLTGSSLTNKSMIIPQSASEGIPSTYVPARNTIMMTLAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
A + I IGV DYSGYPDCR + I++ E NL ++ V +H PL+ L
Sbjct: 111 AWAETIKSQAIFIGVNAIDYSGYPDCREEYIKSFEVMANLATKTGVEGSRITIHAPLIHL 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E L G L ++ +CY + G+ C C +C LR++G+ +
Sbjct: 171 DKAEIISLGIQKG------LDYSKTVSCYQATEE-----GHACGKCDSCRLRREGFEKLG 219
>gi|296272040|ref|YP_003654671.1| exsB protein [Arcobacter nitrofigilis DSM 7299]
gi|296096215|gb|ADG92165.1| exsB protein [Arcobacter nitrofigilis DSM 7299]
Length = 223
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 28/237 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
+ A+ + SGG DS+ A + + + F+YGQR + EL+ V + +
Sbjct: 1 MSKKAICILSGGMDSTLSSYIAKNEGYEIIAIHFNYGQRTEKRELKAFRDVCENL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ + + + I S+LT +V + +P T+VP RN IFL AA +
Sbjct: 56 ----NVKNKYEIDIPFFTQIGASALTDANIDVPIDGVKPGVPVTYVPFRNGIFLSIAAAV 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYET 180
A + + IGV E D SGYPDC I I+ AIN G + +H+++ TPL+ L K E
Sbjct: 112 AEKENAEAMFIGVVEEDSSGYPDCTDAFINQIKNAINEGTKEATHISIKTPLVKLHKSEI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
K A ++ N+ LE + +CY +++ C C +C LR G+ + K
Sbjct: 172 VKKALEL------NVPLELTWSCYKEEKE-------ACGVCDSCRLRLNGFAQANSK 215
>gi|220910546|ref|YP_002485857.1| exsB protein [Cyanothece sp. PCC 7425]
gi|254764328|sp|B8HQ99|QUEC_CYAP4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|219867157|gb|ACL47496.1| exsB protein [Cyanothece sp. PCC 7425]
Length = 229
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 103/237 (43%), Gaps = 30/237 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++L SGG DS+T L A LSF+YGQR+K EL + +
Sbjct: 2 KIVILLSGGLDSTTVLYLARSLGHDCYALSFNYGQRHKQEL----------AAAIAVAQL 51
Query: 70 SLGEDHILPLAILGDISHSSLTK-------NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ H + LG S+LT N A K +P T+VP RN IFL FA +
Sbjct: 52 AGVIQHQVISFDLGLWGGSALTDYTLDLPQNRAFKEMAEQIPITYVPARNTIFLSFALSY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKK 177
A +G T + G+ DYSGYPDCR D I A++ LG + + + TPL+ L K
Sbjct: 112 AEAIGATQVYAGMNAIDYSGYPDCRPDYIAAMQEVYRLGTKQGREGEPIQIITPLIDLTK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+L +G + ++ +CY + C C +C LR + E
Sbjct: 172 PAIIQLGNRLG------VPWAKTWSCYS--DGGGNDPPVACGVCDSCRLRLAAFAEL 220
>gi|91070513|gb|ABE11420.1| hypothetical ATPase [uncultured Prochlorococcus marinus clone
HOT0M-3E5]
Length = 224
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 116/239 (48%), Gaps = 30/239 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K S ++L SGG DSST A ++ LSFDYGQR+K EL + K
Sbjct: 4 KNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELNSASIIAKHF------ 57
Query: 67 WKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
+ E I+ L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A + A
Sbjct: 58 ---DIEEFKIIKLDLSLWGGSSLTDTQKNIPIEGVQTNQIPNTYVPGRNTIFISVALSYA 114
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKY 178
+ I +GV DYSGYPDCR D I+ + +L + + + TPL+ L K
Sbjct: 115 EAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNKE 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
E KLA D ++ L+++ +CY G C C +C +R + ++
Sbjct: 175 EIIKLAFD------NHVPLDKTWSCYSGNSKP-------CGKCDSCRIRNAAYEKWLNN 220
>gi|317178997|dbj|BAJ56785.1| ExsB trans-regulatory protein [Helicobacter pylori F30]
Length = 226
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 150/233 (64%), Gaps = 18/233 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I++S+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIQLDFLENITYSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKKDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G ++LI++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ +
Sbjct: 177 LGA---LDLIIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFESHKK 226
>gi|166712979|ref|ZP_02244186.1| transcriptional regulator [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 224
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+
Sbjct: 2 KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELD---------AAARVAAA 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 53 QGVIAHKVVDVD-LRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 112 ANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAELRVHAPLQFLSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY D G C C AC LR G+ +
Sbjct: 172 EGVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFADAG 213
>gi|317177457|dbj|BAJ55246.1| ExsB trans-regulatory protein [Helicobacter pylori F16]
Length = 226
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 151/233 (64%), Gaps = 18/233 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIENALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G ++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ +
Sbjct: 177 LGA---LDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFESHQK 226
>gi|307293825|ref|ZP_07573669.1| exsB protein [Sphingobium chlorophenolicum L-1]
gi|306879976|gb|EFN11193.1| exsB protein [Sphingobium chlorophenolicum L-1]
Length = 230
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 73/239 (30%), Positives = 105/239 (43%), Gaps = 28/239 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A++L SGG DS A + RV LS DY QR+++EL V + +
Sbjct: 2 VANSGKFAVVLLSGGLDSMVAGGLAREAGYRVLALSIDYNQRHRLELRAAGRVAAALNAI 61
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAAT 121
HI+ L S+LT ++A+ +P T+VP RN IFL
Sbjct: 62 ----------SHIVLPLDLTAFGGSALTADIAVPKGGVGPGIPVTYVPARNTIFLSLTLG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLK 176
LA G ++ IGV DYSGYPDCR + I A + L ++ + ++ PL +
Sbjct: 112 LAEVAGANDVFIGVNALDYSGYPDCRPEFIDAFQKMAALATKAGVEGHPIRINAPLQHMS 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + A +G L S +CY D G C C +C LR KG+ME
Sbjct: 172 KADIVREAHRLG------LDAGLSWSCYDPTPD-----GKHCGQCDSCRLRSKGFMEAG 219
>gi|157738264|ref|YP_001490948.1| ExsB family transcriptional regulator [Arcobacter butzleri RM4018]
gi|189038892|sp|A8EWF5|QUEC_ARCB4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157700118|gb|ABV68278.1| transcriptional regulator, ExsB family [Arcobacter butzleri RM4018]
Length = 228
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 30/243 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKK 59
MN I A+ + SGG DS+ A + + F+YGQR + EL+ + +
Sbjct: 1 MNKI--STKKAICILSGGMDSTLSSYIAKKDGFEIIAVHFNYGQRTQNRELKAFRDICNE 58
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFL 116
+ + + + + I ++LT +V + +P T+VP RN IFL
Sbjct: 59 L---------DIKSKYEIDIPFFTQIGANALTDMSIDVPTGGLEAGVPITYVPFRNGIFL 109
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMW 174
A +A + G T + IGV + D SGYPDC + I+ ++ AIN G ++ + + TPL+
Sbjct: 110 AITAAIAEKEGATAMYIGVVQEDSSGYPDCTEEFIQDMKKAINQGTKEDTKIEIITPLVH 169
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L K + + A + N+ LE + +CY + + C C +C LR G+ +
Sbjct: 170 LSKAQIVQEAIKL------NVPLELTWSCYKEEEE-------ACGVCDSCRLRLNGFEQA 216
Query: 235 KEK 237
+K
Sbjct: 217 GKK 219
>gi|110816279|sp|Q9PCC3|QUEC_XYLFA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 230
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + +
Sbjct: 2 KKAVVLLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARVL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
++ ++ + L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 54 -NVAAHKVVDVD-LRSIGGSALTDDIEIPDAGGKGIPVTYVPARNTIMLSLALGWAEVIG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
+I GV DYSGYPDCR I A ET NL + V VH PL +L K E
Sbjct: 112 AADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVH 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
L + + +CY D G C C AC LR G+ +
Sbjct: 172 EGV------LHGVDFGLTVSCYRADVD-----GRACGRCDACKLRAAGFADAG 213
>gi|16332015|ref|NP_442743.1| ExsB protein [Synechocystis sp. PCC 6803]
gi|1001327|dbj|BAA10814.1| ExsB protein [Synechocystis sp. PCC 6803]
Length = 271
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 26/236 (11%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+A++L SGG DS+T + A RV LSF+YGQR+ EL +++
Sbjct: 39 SMTKTAVVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRHDRELRAA-------ADIVQ 91
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAY 124
L LA G S + + + ++ + +P+T+VPGRN +F+ +LA
Sbjct: 92 ALGIPEHFSINLDLAQWGGSSLTDRQQTLPQTGVEPDIIPSTYVPGRNTVFIALGLSLAE 151
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
G + +G+ DYSGYPDCR + + + L + + + PL+ L K +
Sbjct: 152 AKGAEAVFLGINAIDYSGYPDCRPEYLATYQQLAALSSKVGVEGRPIQLLAPLIELSKVD 211
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A ++G + + ++ +CY G + C C +C LR + +E
Sbjct: 212 IVHKALELG------VPIAQTWSCYAGGEEP-------CGRCDSCRLRDQALIEAG 254
>gi|291276559|ref|YP_003516331.1| queuosine biosynthesis protein [Helicobacter mustelae 12198]
gi|290963753|emb|CBG39588.1| Putative queuosine biosynthesis protein [Helicobacter mustelae
12198]
Length = 231
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 89/233 (38%), Positives = 134/233 (57%), Gaps = 18/233 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L++FSGGQDS+T +WA F VE L+FDY Q++++EL+ + +K+ +
Sbjct: 2 QKCLVVFSGGQDSTTVAAWAKKEFSSVELLAFDYQQKHRIELQQARKIAEKLELKLN--- 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV-----AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ L L I+ S+L +L +FVP RN +FL A A
Sbjct: 59 -------MIVLDFLAQIADSALFAKSIENLSTKHKTHQDLLASFVPNRNGLFLTIAHAFA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ +I IGV E DYSGYPDCR + I A+E+A+N G ++ + +HTPL + K E + L
Sbjct: 112 QKIHANHIAIGVSEQDYSGYPDCREEFITAMESALNKGAQTQIKIHTPLSHMSKAEEFLL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
AQ++G ++ +ILE+SHTCY G R+ R+ WGYGC C AC LR+ + +F
Sbjct: 172 AQNLG---VLEMILEDSHTCYEGVRESRHAWGYGCGICAACILRKNAYEKFLA 221
>gi|317181953|dbj|BAJ59737.1| ExsB trans-regulatory protein [Helicobacter pylori F57]
Length = 226
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 149/230 (64%), Gaps = 18/230 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+PL L +I+HS+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSSTAIKILTPLMFLNKAQEFQMAKDLGA 179
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++LI++E+HTCY G+R + +GYGCN CPAC LR+KG+ EF+ +
Sbjct: 180 ---LDLIIKETHTCYQGERKILHAYGYGCNECPACQLRKKGYEEFESHQK 226
>gi|302036609|ref|YP_003796931.1| queuosine biosynthesis protein queC [Candidatus Nitrospira
defluvii]
gi|300604673|emb|CBK41005.1| Queuosine biosynthesis protein QueC [Candidatus Nitrospira
defluvii]
Length = 232
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 74/235 (31%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A++L SGG DS+ + A R+ L+ YGQR+ VE+E +
Sbjct: 6 PKAVILLSGGLDSTVTAAIAKQDGYRLYCLTISYGQRHHVEVERAR----------AVAQ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLVFAATL 122
H++ L S+LT +V + +P T+VP RN IFL A
Sbjct: 56 ALSAAAHVVVDVDLRAFGGSALTDDVTVPKDRTQEDRAGGIPVTYVPARNTIFLSLALAY 115
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
A L I G DYSGYPDCR D I A ET LG + V V PL+ L K
Sbjct: 116 AETLEAQRIYFGANVLDYSGYPDCRPDFIHAFETVARLGTKIGMEGRSVEVCAPLLMLSK 175
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
E + Q++ LE +H+CY D G C C +C +R++G+
Sbjct: 176 AEIVQRGQEL------RAPLELTHSCYDPGAD-----GVACGRCDSCRIRREGFR 219
>gi|254525807|ref|ZP_05137859.1| exsB protein [Prochlorococcus marinus str. MIT 9202]
gi|221537231|gb|EEE39684.1| exsB protein [Prochlorococcus marinus str. MIT 9202]
Length = 224
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 30/242 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K S ++L SGG DSST A ++ LSFDYGQR+K EL + K
Sbjct: 1 MTLKNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELYSASIIAKHF--- 57
Query: 64 MPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAA 120
++ E I+ L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A
Sbjct: 58 ------NIEEFKIIKLDLSLWGGSSLTDTQKNIPLEGVQTNKIPNTYVPGRNTIFISVAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWL 175
+ A + I +GV DYSGYPDCR D I+ + +L + + + TPL+ L
Sbjct: 112 SYAEAINADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E KLA ++ LE++ +CY G C C +C +R + ++
Sbjct: 172 NKEEIIKLA------YANHVPLEKTWSCYSGNSKP-------CGKCDSCRIRNDAYEKWL 218
Query: 236 EK 237
Sbjct: 219 NN 220
>gi|208434560|ref|YP_002266226.1| ExsB trans-regulatory protein [Helicobacter pylori G27]
gi|254764352|sp|B5Z711|QUEC_HELPG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|208432489|gb|ACI27360.1| ExsB trans-regulatory protein [Helicobacter pylori G27]
Length = 226
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 96/233 (41%), Positives = 150/233 (64%), Gaps = 18/233 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A ++
Sbjct: 61 ----IISLDFLENITRSALFKNSNDLMGYSHAQNKDLPNSFVPNRNAIFITLLHSYAQKI 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G +++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ +
Sbjct: 177 LG---VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQANKK 226
>gi|21243864|ref|NP_643446.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str.
306]
gi|81800086|sp|Q8PHW1|QUEC_XANAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21109465|gb|AAM37982.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str.
306]
Length = 224
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+
Sbjct: 2 KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELD---------AAARVAAA 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 53 QGVIAHKVVDVD-LRSIGGSALTDDIEVPDAGGDGIPVTYVPARNTIMLSLALGWAEVIG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 112 ANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY D G C C AC LR G+ +
Sbjct: 172 EGVRLG------VDFGVTVSCYRADAD-----GRACGHCDACRLRAAGFADAG 213
>gi|73540502|ref|YP_295022.1| ExsB [Ralstonia eutropha JMP134]
gi|110816249|sp|Q474K5|QUEC_RALEJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|72117915|gb|AAZ60178.1| ExsB [Ralstonia eutropha JMP134]
Length = 226
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 105/243 (43%), Gaps = 27/243 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS YGQR+ EL+ V + + +
Sbjct: 1 MTKRAIVLLSGGLDSATVLAMAKAQGFETYALSMRYGQRHSSELDAAKQVASALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + +V + +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRRFGGSALTDDKLDVPTGGASSGIPITYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ V VH P++ + K E
Sbjct: 114 GGRDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFHVHAPIIDMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
+ +G + + +CY D G C C +C +R+ G+ +
Sbjct: 174 RAGIRLG------VDYSMTVSCYKADDD-----GRACGVCDSCRIRRAGFEAAGVPDPTR 222
Query: 238 YQD 240
YQ+
Sbjct: 223 YQN 225
>gi|28198846|ref|NP_779160.1| transcriptional regulator [Xylella fastidiosa Temecula1]
gi|182681543|ref|YP_001829703.1| exsB protein [Xylella fastidiosa M23]
gi|81438814|sp|Q87CW1|QUEC_XYLFT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764393|sp|B2I4Y4|QUEC_XYLF2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|28056937|gb|AAO28809.1| transcriptional regulator [Xylella fastidiosa Temecula1]
gi|182631653|gb|ACB92429.1| exsB protein [Xylella fastidiosa M23]
gi|307579970|gb|ADN63939.1| exsB protein [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 230
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ + A + V LS YGQR+ EL+ + + + +
Sbjct: 2 KKAVILLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARAL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ ++ + L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 54 -NVVAHKVVDVD-LRSIGGSALTDDIEIPDAGGEGIPVTYVPARNTIMLSLALGWAEVIG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
+I GV DYSGYPDCR I A ET NL + V VH PL +L K E
Sbjct: 112 AADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVH 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
L + + +CY D G C C AC LR G+ +
Sbjct: 172 EGL------LHGVDFGLTVSCYRADVD-----GRACGRCDACKLRVAGFADAG 213
>gi|207092521|ref|ZP_03240308.1| hypothetical protein HpylHP_06375 [Helicobacter pylori
HPKX_438_AG0C1]
gi|207108661|ref|ZP_03242823.1| hypothetical protein HpylH_03964 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 228
Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats.
Identities = 97/229 (42%), Positives = 148/229 (64%), Gaps = 18/229 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 10 FSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE----- 60
Query: 75 HILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A ++G +
Sbjct: 61 -IISLDFLENITRSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGAS 119
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D+G
Sbjct: 120 NIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG- 178
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 179 --VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQTKV 225
>gi|217031987|ref|ZP_03437488.1| hypothetical protein HPB128_187g14 [Helicobacter pylori B128]
gi|298736334|ref|YP_003728860.1| hypothetical protein HPB8_839 [Helicobacter pylori B8]
gi|216946297|gb|EEC24903.1| hypothetical protein HPB128_187g14 [Helicobacter pylori B128]
gi|298355524|emb|CBI66396.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 228
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 150/231 (64%), Gaps = 18/231 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYVQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IISLDFLENITRSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ D I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G +++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 177 LG---VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQTK 224
>gi|198282217|ref|YP_002218538.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665551|ref|YP_002424582.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198246738|gb|ACH82331.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517764|gb|ACK78350.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 229
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 27/242 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A A++L SGG DS+T L+ V LSFDYGQR+K EL + + + +
Sbjct: 5 ATPAIVLLSGGLDSATVLALMRRDGFAVHALSFDYGQRHKEELRYAALLAQSMGAASHRV 64
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ LA G + + ++ +P T+VP RN +FL A LA LG
Sbjct: 65 LR-------IDLAAFGGSALTDPQLSIPETGLAPGIPITYVPARNTVFLSLALALAEVLG 117
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKKYETWK 182
+I +GV DYSGYPDCR + ++A E + +H PL +L K E +
Sbjct: 118 ARDIFLGVNSQDYSGYPDCRAEFVQAFEALAQVATRLGDEARGPRIHAPLQFLNKSEIIR 177
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
L +G + + +CY G C C +C LR++G+ + Y
Sbjct: 178 LGSRLG------VDYGMTRSCYQ-----LDAEGRSCGRCDSCRLRREGFRQAGIADPTPY 226
Query: 239 QD 240
QD
Sbjct: 227 QD 228
>gi|332305742|ref|YP_004433593.1| exsB protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173071|gb|AEE22325.1| exsB protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 218
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 27/231 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+++FSGG DS T L+ A+ V LSF+YGQR+ EL+ K +
Sbjct: 1 MVQKVVVIFSGGMDSFTVLNMAVKDGYEVHALSFNYGQRHSKELDYASRACKILG----- 55
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ + + I SSLT +V + + ++ +T VP RN+I L A
Sbjct: 56 -----VAHKIIDISAINELIGGSSLTSDVDIPEGHYAEESMKSTVVPNRNMILLSMAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + G D+ YPDCR + + + + + + +P ++ K +
Sbjct: 111 AVSLDANKVYYGAHSGDHDIYPDCRPEFVERMNDVCAIANYEKIEIVSPFLYQSKIDILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
++G L + TCY G+ C C AC R + + +
Sbjct: 171 AGLNMG------LDYGLTWTCYNGREK-------ACGKCGACQERLEAFEK 208
>gi|116071887|ref|ZP_01469155.1| ExsB [Synechococcus sp. BL107]
gi|116065510|gb|EAU71268.1| ExsB [Synechococcus sp. BL107]
Length = 226
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 22/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+A+ L SGG DS+T + A + DRV LSFDYGQR++ EL+ V +
Sbjct: 3 QRTAIALLSGGLDSATAAALAQESGDRVIGLSFDYGQRHRRELKAAAKVAAHL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L E H + + LG S+LT +++ +P T+VPGRN +F+ +LA
Sbjct: 56 --NLAEHHQVDV-NLGAWGGSALTDPNQTVPTSGVEEGVIPVTYVPGRNTVFIAIGLSLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G +V+GV DYSGYPDCR D + A ++ +L ++ H P +W E W
Sbjct: 113 EARGAERLVLGVNAVDYSGYPDCRPDYLDAFQSLASLSSKAGREGHGPQLWAPLVE-WSK 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + + + + E+ +CY G C C +C +R E
Sbjct: 172 TKIVDEALRLGVPINETWSCYSGGNRP-------CGVCDSCRIRDSALREAG 216
>gi|157414297|ref|YP_001485163.1| PP-loop superfamily ATPase [Prochlorococcus marinus str. MIT 9215]
gi|167016444|sp|A8G7J6|QUEC_PROM2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157388872|gb|ABV51577.1| Predicted PP-loop superfamily ATPase [Prochlorococcus marinus str.
MIT 9215]
Length = 224
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 30/242 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K S ++L SGG DSST A ++ LSFDYGQR+K EL + K
Sbjct: 1 MTLKNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELYSASIIAKHF--- 57
Query: 64 MPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAA 120
++ E I+ L++ G S + KN+ ++ +Q N +PNT+VPGRN IF+ A
Sbjct: 58 ------NIEEFKIIKLDLSLWGGSSLTDTQKNIPLEGVQTNKIPNTYVPGRNTIFISVAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWL 175
+ A + I +GV DYSGYPDCR D I+ + +L + + + TPL+ L
Sbjct: 112 SYAEAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E KLA ++ LE++ +CY G + C C +C +R + ++
Sbjct: 172 NKEEIIKLA------YSNHVPLEKTWSCYSG-------YSKPCGKCDSCRIRNDAYEKWL 218
Query: 236 EK 237
Sbjct: 219 NN 220
>gi|109899268|ref|YP_662523.1| exsB protein [Pseudoalteromonas atlantica T6c]
gi|123064352|sp|Q15RL9|QUEC_PSEA6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|109701549|gb|ABG41469.1| preQ(0) biosynthesis protein QueC [Pseudoalteromonas atlantica T6c]
Length = 218
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 29/238 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+++FSGG DS T L+ A+ V LSF+YGQR+ EL+ +
Sbjct: 1 MVQKVVVIFSGGMDSFTVLNMAVKEGYEVHALSFNYGQRHSKELDYASRACITLG----- 55
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ + + I SSLT +V + + ++ +T VP RN+I L A
Sbjct: 56 -----VAHKIIDISAINELIGGSSLTSDVDIPEGHYAEESMKSTVVPNRNMILLSMAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + G D+ YPDCR + + + + V + +P ++ K +
Sbjct: 111 AVSLDANKVYYGAHSGDHDIYPDCRPEFVERMNDVCAIANYEKVEIVSPFLYQSKIDILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
++G L + TCY G+ C C AC R + + K QD
Sbjct: 171 AGLNMG------LDYNLTWTCYNGREK-------ACGKCGACQERLEAFD--KNNAQD 213
>gi|299067716|emb|CBJ38925.1| queuosine biosynthesis protein [Ralstonia solanacearum CMR15]
Length = 224
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS YGQR+ ELE V + + +
Sbjct: 1 MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + +V +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRRFGGSALTDDALDVPTTGVQEGIPITYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ H+ V+ P++ + K E
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDHIRVNAPIIAMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C +C +R+ G+
Sbjct: 174 QAGARLG------VDYSLTVSCYQAD-----DAGRACGVCDSCRIRRAGFEAAG 216
>gi|78048824|ref|YP_364999.1| ExsB family transcriptional regulator [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|110816277|sp|Q3BQG4|QUEC_XANC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78037254|emb|CAJ24999.1| putative transcriptional regulator, ExsB family [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 224
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+
Sbjct: 2 KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELD---------AAARVAAA 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 53 QGVVAHKVVDVD-LRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 112 ANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGVGLRVHAPLQFLSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY D G C C AC LR G+ +
Sbjct: 172 EGVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFSDAG 213
>gi|118602572|ref|YP_903787.1| exsB protein [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|189038939|sp|A1AWK9|QUEC_RUTMC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|118567511|gb|ABL02316.1| preQ(0) biosynthesis protein QueC [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 230
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 24/240 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M++ K A++L SGG DS+T L+ A + +LSFDYGQ+ K EL+ K
Sbjct: 1 MSNTRHKI-KAVILLSGGLDSTTTLAIAKTKNFECYSLSFDYGQKQKSELKSAENFAKIF 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + + L+ + + + ++ + +++P T+VP RN IFL +A
Sbjct: 60 GSIKHRVMK-------ISLSNIDFSALTDDKIDIPKFSKSDDIPITYVPARNTIFLSYAL 112
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
+ + L +I IGV DYSGYPDCR I+A E NL + + +HTPL+ L
Sbjct: 113 SWSEVLDCQHIFIGVNTLDYSGYPDCREIYIKAFEVMANLATKQSIEGKKLTIHTPLIHL 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K +G + + TCY + G C C AC R+ G++E K
Sbjct: 173 NKAQIIKKGLSLG------IDYSLTTTCYQADKS-----GKACGICDACEYRKLGFIEAK 221
>gi|110816273|sp|Q55468|QUEC_SYNY3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 232
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 26/235 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A++L SGG DS+T + A RV LSF+YGQR+ EL +++
Sbjct: 1 MTKTAVVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRHDRELRAA-------ADIVQA 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L LA G S + + + ++ + +P+T+VPGRN +F+ +LA
Sbjct: 54 LGIPEHFSINLDLAQWGGSSLTDRQQTLPQTGVEPDIIPSTYVPGRNTVFIALGLSLAEA 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
G + +G+ DYSGYPDCR + + + L + + + PL+ L K +
Sbjct: 114 KGAEAVFLGINAIDYSGYPDCRPEYLATYQQLAALSSKVGVEGRPIQLLAPLIELSKVDI 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A ++G + + ++ +CY G + C C +C LR + +E
Sbjct: 174 VHKALELG------VPIAQTWSCYAGGEEP-------CGRCDSCRLRDQALIEAG 215
>gi|313202055|ref|YP_004040713.1| exsb protein [Methylovorus sp. MP688]
gi|312441371|gb|ADQ85477.1| exsB protein [Methylovorus sp. MP688]
Length = 225
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L SGG DS+T L+ A + LS DY QR+ EL V + + K
Sbjct: 1 MSKKAVVLLSGGLDSATVLAIARSQGYECYCLSLDYHQRHSAELLAAQRVAECLGAAEHK 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L L++ G + + +V + +P T+VP RN I L A A L
Sbjct: 61 TVQ-------LDLSLFGGSALTDNRIDVP-QSPTEGIPVTYVPARNTIMLSLALAWAEVL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
+I IGV DYSGYPDCR + +RA ++ NL ++ V VH PL+ L K +
Sbjct: 113 KSRDIFIGVNALDYSGYPDCRAEYVRAFQSMANLATKAAVEGDTITVHAPLIDLSKADIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K +G + +CY + G C C +C R++G++
Sbjct: 173 KRGSALG------FDYGMTVSCYQADEE-----GRACGKCDSCRFRREGFLAAG 215
>gi|58581302|ref|YP_200318.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623226|ref|YP_450598.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577420|ref|YP_001914349.1| ExsB protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|325929353|ref|ZP_08190483.1| transcriptional regulator;preQ(0) biosynthesis protein QueC
[Xanthomonas perforans 91-118]
gi|75435924|sp|Q5H288|QUEC_XANOR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816278|sp|Q2P553|QUEC_XANOM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764392|sp|B2STI7|QUEC_XANOP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|58425896|gb|AAW74933.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367166|dbj|BAE68324.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188521872|gb|ACD59817.1| ExsB protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|325540265|gb|EGD11877.1| transcriptional regulator;preQ(0) biosynthesis protein QueC
[Xanthomonas perforans 91-118]
Length = 224
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+
Sbjct: 2 KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELD---------AAARVAAA 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + L I S+LT ++ + + +P T+VP RN I L A A +G
Sbjct: 53 QGVVAHKVVDVD-LRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 112 ANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY D G C C AC LR G+ +
Sbjct: 172 EGVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFADAG 213
>gi|254000096|ref|YP_003052159.1| exsB protein [Methylovorus sp. SIP3-4]
gi|253986775|gb|ACT51632.1| exsB protein [Methylovorus sp. SIP3-4]
Length = 225
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L SGG DS+T L+ A + LS DY QR+ EL V + + K
Sbjct: 1 MSKKAVVLLSGGLDSATVLAIARSQGYECYCLSLDYHQRHSAELLAAQRVAECLGAAEHK 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L L++ G + + +V + +P T+VP RN I L A A L
Sbjct: 61 TVQ-------LDLSLFGGSALTDNRIDVP-QSPTEGIPVTYVPARNTIMLSLALAWAEVL 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
+I IGV DYSGYPDCR + +RA ++ NL ++ V VH PL+ L K +
Sbjct: 113 KSRDIFIGVNALDYSGYPDCRAEYVRAFQSMANLATKAAVEGDTITVHAPLIDLSKADIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K +G + +CY + G C C +C R++G++
Sbjct: 173 KRGSALG------FDYGMTVSCYQADEE-----GRACGKCDSCRFRREGFLAAG 215
>gi|71282550|ref|YP_269590.1| exsB protein [Colwellia psychrerythraea 34H]
gi|110816200|sp|Q480C9|QUEC1_COLP3 RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|71148290|gb|AAZ28763.1| exsB protein [Colwellia psychrerythraea 34H]
Length = 218
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A ++++SGG DS T L+ A V LSFDYGQR+ ELEC V K++
Sbjct: 1 MAEKVVVIYSGGMDSFTVLNRAKKDGKEVFALSFDYGQRHVKELECASIVCKELA----- 55
Query: 67 WKDSLGEDHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
++ ++ + + + SSLT ++ + + ++ +T VP RN+I L A
Sbjct: 56 -----VNHKVIDISAINQLLAGSSLTDDIDIPEGHYEAESMKSTVVPNRNMILLSLAVAY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A +G + G D++ YPDCR + + + + V + +P + + K
Sbjct: 111 AVSVGAEQVYYGAHSGDHAIYPDCRPEFVEKMNDVCKIANYESVEIFSPYLSVDKTAILA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G L + TCY G+ C C +C R + + E
Sbjct: 171 DGIKMG------LDYSNTWTCYNGREK-------ACGKCGSCQERLEAFEE 208
>gi|300704847|ref|YP_003746450.1| queuosine biosynthesis protein [Ralstonia solanacearum CFBP2957]
gi|299072511|emb|CBJ43861.1| queuosine biosynthesis protein [Ralstonia solanacearum CFBP2957]
Length = 224
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS YGQR+ ELE V + + +
Sbjct: 1 MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + +V +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRRFGGSALTDDALDVPTAGVKEGIPITYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ + V+ P++ + K E
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGERIRVNAPIIAMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C +C +R+ G+
Sbjct: 174 QAGARLG------VDYSLTVSCYQADDE-----GRACGVCDSCRIRRAGFEAAG 216
>gi|317012455|gb|ADU83063.1| trans-regulatory protein ExsB [Helicobacter pylori Lithuania75]
Length = 228
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 149/232 (64%), Gaps = 18/232 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGGQDS+T WA RF +V + FDY Q++ VELEC +KI L+ +
Sbjct: 7 VISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECA----QKIASLLQLPYE-- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
I+ L L +I+ S+L KN Q+ +LPN+FVP RN IF+ + A +L
Sbjct: 61 ----IISLDFLENITRSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKL 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +NI +GV + D+SGYPDC+ I++IE A+NLG + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEYFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+G +++L+++E+HTCY G+R + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 177 LG---VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQTKV 225
>gi|207728192|ref|YP_002256586.1| hypothetical protein RSMK04567 [Ralstonia solanacearum MolK2]
gi|206591437|emb|CAQ57049.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 224
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS YGQR+ ELE V + + +
Sbjct: 1 MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + +V +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRRFGGSALTDDALDVPTTGVQEGIPITYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ + V+ P++ + K E
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDRIRVNAPIIAMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C +C +R+ G+
Sbjct: 174 QAGARLG------VDYSLTVSCYQAD-----DAGRACGVCDSCRIRRAGFEAAG 216
>gi|144897535|emb|CAM74399.1| ExsB [Magnetospirillum gryphiswaldense MSR-1]
Length = 230
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LSF YGQR++VEL
Sbjct: 1 MTKKAVILLSGGLDSATVLALATEWGFDCAALSFRYGQRHQVEL----------ACAAKV 50
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAA 120
+ DH + L S+LT ++A+ + +P T+VP RN I L FA
Sbjct: 51 AAAAGVADHRIADIDLRLFGGSALTADIAVPKDRLEAEMEAEIPVTYVPARNTIMLSFAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
A LG +I +GV DYSGYPDCR + I+A ET NL ++ V +H PL+ L
Sbjct: 111 AFAEVLGAADIFVGVNAVDYSGYPDCRPEYIKAFETMANLATKAGVEGRRLTIHAPLISL 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + +G + + +CY G+ C C AC LR KG+ +
Sbjct: 171 TKAQIIAEGKRLG------VDYGLTSSCYDPDVH-----GHACGRCDACRLRLKGFADAG 219
>gi|320355234|ref|YP_004196573.1| preQ(0) biosynthesis protein QueC [Desulfobulbus propionicus DSM
2032]
gi|320123736|gb|ADW19282.1| preQ(0) biosynthesis protein QueC [Desulfobulbus propionicus DSM
2032]
Length = 229
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN+ A++L SGG DS+T L+ A LSF YGQR VEL+ + +
Sbjct: 1 MNE-----RQAVVLLSGGLDSTTVLAIAQSLGFTCNCLSFQYGQRQSVELDRARVIGRLA 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNII 114
H++ L I S+LT + + + ++P T+VPGRNI+
Sbjct: 56 G----------VARHLVLRVDLDAIGGSALTTAIEVPKDRPLNEMEQDIPVTYVPGRNIL 105
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVH 169
FL A + A LG+++I +G+ DYSGYPDCR ++A E NLG + +H
Sbjct: 106 FLAHALSWAEVLGVSDIFLGINAVDYSGYPDCRPQFLQAFEQMANLGTKAGTTGRPFRLH 165
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
PL+ L K E ++G + +H+CY DK C C AC LR +
Sbjct: 166 APLIQLSKKEIILKGMELG------VDYSLTHSCYDPAGDK------ACGRCDACQLRLQ 213
Query: 230 GWMEFK 235
G+ E
Sbjct: 214 GFREAG 219
>gi|154174066|ref|YP_001407913.1| ExsB protein [Campylobacter curvus 525.92]
gi|189038901|sp|A7GXH1|QUEC_CAMC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|112803412|gb|EAU00756.1| ExsB protein [Campylobacter curvus 525.92]
Length = 223
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ + SGG DS+ C A + L FDY QR ++I + +
Sbjct: 2 KKAVCIMSGGMDSTLCAVMAKREGYEIIALHFDYEQRTMR---REKMAFEQICDYL---- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + L ++ + DI ++LT V+ + +PNT+VP RN IF+ AA LA +
Sbjct: 55 -GIKKRLNLDVSFIADIGGNALTDKNLAVSKSGLGDEIPNTYVPFRNGIFISIAAALAEK 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
G I IGV E D SGYPDC+ + I + AIN+G E+ + + TPL+ L K +
Sbjct: 114 EGAQAIYIGVVEEDSSGYPDCKGEFIERMNAAINVGTAPETKIKIVTPLVNLSKADIVAK 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + G LE + +CY + + C C +C LR +G+ K
Sbjct: 174 SLEFGS------PLELTWSCYEREDE-------ACGLCDSCRLRLRGFERAGVK 214
>gi|307150182|ref|YP_003885566.1| exsB protein [Cyanothece sp. PCC 7822]
gi|306980410|gb|ADN12291.1| exsB protein [Cyanothece sp. PCC 7822]
Length = 227
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + A++L SGG DS+T + AL V LS YGQR++ EL+ V +
Sbjct: 1 MNQPL-----AVVLLSGGLDSATSAAIALADGYEVIALSLSYGQRHQRELQAAKKVVAAL 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN-VAMK---IQDNNLPNTFVPGRNIIFL 116
+ +I+ + L SSLT + M ++ N +PNT+VPGRN +F+
Sbjct: 56 ---------DIKSHYIMDV-NLSQWGGSSLTDELIDMPTDGVKPNLIPNTYVPGRNTVFI 105
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTP 171
A +LA G I +G+ DYSGYPDCR + I A + +L + + + P
Sbjct: 106 AIALSLAEAKGAEAIYLGINAVDYSGYPDCRPEYIEAFQKLASLSSKVGVEGKAIQLMAP 165
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ K + + A + + + ++ +CY G + C C +C +R +
Sbjct: 166 LVKDSKADIVRRAMSL------EVPIADTWSCYQGGDEP-------CGLCDSCRIRNRAL 212
Query: 232 MEFK 235
+E
Sbjct: 213 IEAG 216
>gi|87308580|ref|ZP_01090720.1| ExsB protein [Blastopirellula marina DSM 3645]
gi|87288672|gb|EAQ80566.1| ExsB protein [Blastopirellula marina DSM 3645]
Length = 234
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 33/240 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T L+ A + + L+F YGQR++ E+E K
Sbjct: 3 KAIVLLSGGLDSTTMLAIAKSQGFTISALTFAYGQRHQSEVESARRTAKAF--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAATLA 123
++ + ++ + L S+LT + + +P T+VP RN IFL +A +A
Sbjct: 54 NVQDHTVIDID-LRAFGGSALTDMIDVPKDRTLDEMTAAIPITYVPARNTIFLSYALAIA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKK 177
+I IGV DY+GYPDCR + + A + NL + +HTPL+ K
Sbjct: 113 EVREAFDIFIGVNSLDYAGYPDCRPEYVSAFQAMANLATAQAVGSGPQLNIHTPLIHKPK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
E + ++G + + +CY D G C C AC LR++G+ + ++
Sbjct: 173 AEIIQAGIELG------VDYSTTVSCYEANGD-----GRACGHCDACILRRQGFQQCGQE 221
>gi|148554324|ref|YP_001261906.1| exsB protein [Sphingomonas wittichii RW1]
gi|189029534|sp|A5V652|QUEC_SPHWW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|148499514|gb|ABQ67768.1| exsB protein [Sphingomonas wittichii RW1]
Length = 230
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 108/243 (44%), Gaps = 29/243 (11%)
Query: 1 MND-IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M+D ++ A++L SGG DS A ++ + L+ DY QR++VELE V
Sbjct: 1 MSDNANREGRRAIVLLSGGLDSMVSGGIAREQGFALAALTIDYNQRHRVELEAAKRVAAA 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLV 117
+ + H+ L SSLT ++ + +P+T+VP RN IFL
Sbjct: 61 LG----------VDRHVTLPLNLRAFGGSSLTDDIDVPKDGVMPGIPSTYVPARNTIFLS 110
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPL 172
A A G +I +GV DYSGYPDCR + I A + +L + T+H PL
Sbjct: 111 LALGFAEATGARDIFLGVNALDYSGYPDCRPEFIAAFQHLADLATKMGVEGQGFTIHAPL 170
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K + + A +G L S +CY D G C C +C LR KG+
Sbjct: 171 QHMTKADIAQEAARLG------LDAGMSWSCYDPTPD-----GKHCGLCDSCRLRSKGFA 219
Query: 233 EFK 235
+
Sbjct: 220 DAG 222
>gi|187927783|ref|YP_001898270.1| exsB protein [Ralstonia pickettii 12J]
gi|254764370|sp|B2U7H6|QUEC_RALPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|187724673|gb|ACD25838.1| exsB protein [Ralstonia pickettii 12J]
Length = 224
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A LS YGQR+ ELE V + + +
Sbjct: 1 MKKRAIVLLSGGLDSATVLAMANADGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + +V + +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRKFGGSALTDDALDVPTDGVQSGIPITYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ + V+ P++ + K E
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGERIRVNAPIINMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C +C +R+ G+
Sbjct: 174 QAGVRLG------VDYGLTVSCYKAD-----DAGRACGVCDSCRIRKAGFEAAG 216
>gi|146329947|ref|YP_001210255.1| BcepGomrgp35 [Burkholderia phage BcepGomr]
gi|145321123|gb|ABP63606.1| BcepGomrgp35 [Burkholderia phage BcepGomr]
Length = 301
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 87/249 (34%), Positives = 137/249 (55%), Gaps = 28/249 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A+++FSGGQDS+T L A+ RV ++F YGQ++ +ELE +
Sbjct: 2 SKKTAVIVFSGGQDSTTILGKAIAEGYRVFPIAFTYGQKHAIELEQAAKIVDHF------ 55
Query: 67 WKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATL 122
L I+ L+ LG+++ S+ + + + + +LP +FVP RN FL A
Sbjct: 56 ---GLAGLKIVDLSALGEVTTSALIGTDGDVNKPSDANPSLPASFVPNRNAAFLTLAHAY 112
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++G + GVC TDYSGYPDCR I A+ +N+G ++ +T+ TPLM++ K ET++
Sbjct: 113 AQQVGADELWTGVCMTDYSGYPDCRDSFINALAATLNIGYDTSITIKTPLMYIDKAETFR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRY------------EWGYGCNSCPACYLRQKG 230
+A+ G +++++E SHTCY G R +WG+GC CPAC LR G
Sbjct: 173 MAELAG---CLDVVIEMSHTCYNGVRSNGEVPTNPSEGGGFFDWGHGCGECPACKLRAGG 229
Query: 231 WMEFKEKYQ 239
W E+ +Y+
Sbjct: 230 WREYLRRYR 238
>gi|300692234|ref|YP_003753229.1| queuosine biosynthesis protein [Ralstonia solanacearum PSI07]
gi|299079294|emb|CBJ51966.1| queuosine biosynthesis protein [Ralstonia solanacearum PSI07]
Length = 224
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 23/231 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS YGQR+ ELE V + + +
Sbjct: 1 MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + V +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRRFGGSALTDDALEVPTTGVKEGIPITYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ + V+ P++ + K E
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDRIRVNAPIIAMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ +G + + +CY + G C C +C +R+ G+
Sbjct: 174 QAGARLG------VDYSLTVSCYQADDE-----GRACGVCDSCRIRRAGFE 213
>gi|226945709|ref|YP_002800782.1| ExsB protein [Azotobacter vinelandii DJ]
gi|259551494|sp|C1DRE9|QUEC_AZOVD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|226720636|gb|ACO79807.1| ExsB protein [Azotobacter vinelandii DJ]
Length = 224
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T + A ++SFDYGQR++ EL V +++
Sbjct: 3 EKKAVILLSGGLDSATVAALAKTEGYACYSMSFDYGQRHRAELRAAERVARQLG------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+H + LG I S+LT + +P T+VP RN +FL A A
Sbjct: 57 ----MVEHKVIGLDLGGIGGSALTDPAIAVPESPCEGIPVTYVPARNTVFLALALGWAEV 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
LG +I IGV DYSGYPDCR I A E NL ++ V + PL L K E
Sbjct: 113 LGARDIFIGVNAVDYSGYPDCRPAFIEAFERMANLATKAGVEGQGFRIRAPLQNLGKDEI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ G + + +CY + G C C +C LR G+
Sbjct: 173 IRAGLRHG------VDYGLTVSCYQADEE-----GRACGRCDSCRLRAAGFA 213
>gi|302879777|ref|YP_003848341.1| exsB protein [Gallionella capsiferriformans ES-2]
gi|302582566|gb|ADL56577.1| exsB protein [Gallionella capsiferriformans ES-2]
Length = 225
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+A++L SGG DS+T L+ A + LS DYGQR+ EL V + +
Sbjct: 2 KNAVVLLSGGLDSATVLAMARAQGYTCYALSVDYGQRHHSELAAAQRVAETLGA------ 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+H + L S+LT N + +P T+VP RN I L A A L
Sbjct: 56 ----REHRVVNIDLTGFGGSALTDNNIAVPEHASAGIPLTYVPARNTIMLSLALAWAEVL 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
+I IGV DYSGYPDCR I A E NL ++ V +H PL+ L K +
Sbjct: 112 RAQDIFIGVNAVDYSGYPDCRPAYIEAFERMANLATQAAVEGHPLTLHAPLLHLSKADII 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K L+++ + +CY + G C C +C LR G+
Sbjct: 172 KSG------SLLSVDYAATVSCYQAD-----DLGRACGVCDSCRLRSAGFAAAG 214
>gi|83746168|ref|ZP_00943222.1| Queuosine biosynthesis protein QueC [Ralstonia solanacearum UW551]
gi|207744073|ref|YP_002260465.1| hypothetical protein RSIPO_02259 [Ralstonia solanacearum IPO1609]
gi|83727134|gb|EAP74258.1| Queuosine biosynthesis protein QueC [Ralstonia solanacearum UW551]
gi|206595477|emb|CAQ62404.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 224
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS YGQR+ ELE V + + +
Sbjct: 1 MKKRAIVLLSGGLDSATVLAMANTQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + +V +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRRFGGSALTDDALDVPTTGVKEGIPITYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ + V+ P++ + K E
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDRIRVNAPIIAMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C +C +R+ G+
Sbjct: 174 QAGARLG------VDYSLTVSCYQAD-----DAGRACGVCDSCRIRRAGFEAAG 216
>gi|85375614|ref|YP_459676.1| exsB protein [Erythrobacter litoralis HTCC2594]
gi|122543216|sp|Q2N612|QUEC_ERYLH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|84788697|gb|ABC64879.1| exsB protein [Erythrobacter litoralis HTCC2594]
Length = 239
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+A +L SGG DS + A ++ V L+ DYGQR+KVEL+ + KI
Sbjct: 4 NSRKAAAILLSGGLDSMVTAAIAQEQGYAVHALTIDYGQRHKVELQSARLIAAKIGA--- 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLA 123
E H+ A L + S+LT ++ + N++P T+VP RN++FL A
Sbjct: 61 -------ERHVEIEADLRALGGSALTDDIDVPKCGVGNDIPVTYVPARNLVFLSLTTAFA 113
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKK 177
G +I IGV DYSGYPDCR + I + NL ++ V +H PL + K
Sbjct: 114 EASGARDIFIGVNALDYSGYPDCRPEFIESFAVTANLATKAGVEESAPFKIHAPLQHMTK 173
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +G + S +CY C +C +C LR+KG+ E
Sbjct: 174 ADIARECARLGLES------AWSWSCYD-----PLPGLKPCGACDSCRLRRKGFAEAG 220
>gi|149185387|ref|ZP_01863703.1| exsB protein [Erythrobacter sp. SD-21]
gi|148830607|gb|EDL49042.1| exsB protein [Erythrobacter sp. SD-21]
Length = 238
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 29/243 (11%)
Query: 1 MNDIIKKAPS-ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M + P A++L SGG DS + A +R + L+ DYGQR+ EL+ + +K
Sbjct: 1 MTSQTSENPGPAVVLLSGGLDSMVTAALARERGHALHALTIDYGQRHMRELQSAKSIAEK 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLV 117
+ E H+ L S+LT ++ + N++P T+VP RN++FL
Sbjct: 61 LG----------VERHVELPLDLRRFGGSALTADIDVPKTGVGNDIPVTYVPARNLVFLA 110
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPL 172
A G +I IGV DYSGYPDCR + I + LG + V +H PL
Sbjct: 111 LTTAFAETSGSRDIFIGVNALDYSGYPDCRPEFIASFAETARLGTKQGVEGEPFSIHAPL 170
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K + + + L S +CY G C +C +C LR+KG+
Sbjct: 171 QHMSKADIARECHRLA------LDPAWSWSCYD-----PTPEGTACGACDSCRLRRKGFE 219
Query: 233 EFK 235
+
Sbjct: 220 DAG 222
>gi|170076909|ref|YP_001733547.1| exsB protein [Synechococcus sp. PCC 7002]
gi|169884578|gb|ACA98291.1| exsB protein [Synechococcus sp. PCC 7002]
Length = 225
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 32/236 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T + A+ V LSF YGQ++ EL + + +
Sbjct: 2 KRAVVLLSGGLDSATSAAQAIADGYEVFALSFRYGQKHSRELVAAQKIAEHL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTK-NVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ E I+ + L SSLT N A+ +Q ++P+T+VPGRN +FL A +LA
Sbjct: 54 -GITEHFIMDV-NLSQWGGSSLTDVNQAIPQSGVQTGDIPSTYVPGRNTVFLAIALSLAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLKKYE 179
I +G+ DYSGYPDCR + + A + +L + + H PL+ K E
Sbjct: 112 AKQAEAIYLGINAVDYSGYPDCRPEYLAAYQKLADLSSKVGIEGHAPQLVAPLVLDTKVE 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ A +G + + + +CY G + C C +C +R + ++
Sbjct: 172 IIQKAVKLG------VPIAATWSCYQGGE-------HPCGLCDSCRIRDEALIKAG 214
>gi|241662344|ref|YP_002980704.1| exsB protein [Ralstonia pickettii 12D]
gi|309780843|ref|ZP_07675584.1| ExsB protein [Ralstonia sp. 5_7_47FAA]
gi|240864371|gb|ACS62032.1| exsB protein [Ralstonia pickettii 12D]
gi|308920525|gb|EFP66181.1| ExsB protein [Ralstonia sp. 5_7_47FAA]
Length = 224
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A LS YGQR+ ELE V + + +
Sbjct: 1 MKKRAIVLLSGGLDSATVLAMANADGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + +V +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRKFGGSALTDDALDVPTDGAQTGIPITYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ + V+ P++ + K E
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGERIRVNAPIIDMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY + G C C +C +R+ G+
Sbjct: 174 QAGVRLG------VDYGLTVSCYKAD-----DAGRACGVCDSCRIRKAGFEAAG 216
>gi|307352769|ref|YP_003893820.1| exsB protein [Methanoplanus petrolearius DSM 11571]
gi|307156002|gb|ADN35382.1| exsB protein [Methanoplanus petrolearius DSM 11571]
Length = 221
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 68/231 (29%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
A+ L SGG DS+T A D + L YGQR + E EC V + +
Sbjct: 2 KKAVCLLSGGMDSTTLAYVAKDIGYEILALHTRYGQRTEKKEAECARKVASLLGAV---- 57
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
E + L+ L SSL + +PNT+VP RN L A + A
Sbjct: 58 -----EFTEISLSHLLAFGGSSLIDKGMEVHDHEDLGEGIPNTYVPFRNSNLLSIATSYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
G I IGV +DY+GYPDCR + + A + I+LG ++++T+ TP + L K E
Sbjct: 113 EARGAEAIFIGVQASDYAGYPDCRPEFVEAFQHVIDLGTSDDTNITLMTPFVNLNKTEIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ ++G + E + +CY G C +C +CY R + +
Sbjct: 173 RRGIELG------VPYEHTWSCYRSN-------GPACGNCDSCYYRLEAFK 210
>gi|21232444|ref|NP_638361.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767473|ref|YP_242235.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990579|ref|YP_001902589.1| Putative transcriptional regulator, ExsB family [Xanthomonas
campestris pv. campestris str. B100]
gi|81306547|sp|Q4UXK8|QUEC_XANC8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81793141|sp|Q8P6F6|QUEC_XANCP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764391|sp|B0RPZ6|QUEC_XANCB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21114225|gb|AAM42285.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66572805|gb|AAY48215.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. 8004]
gi|167732339|emb|CAP50531.1| Putative transcriptional regulator, ExsB family [Xanthomonas
campestris pv. campestris]
Length = 224
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 27/233 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+
Sbjct: 2 KKAVVLLSGGMDSAAVIALAQEQGFAVHALSVRYGQRHTSELDAAA---------RVAAA 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + L I S+LT ++ + +P T+VP RN I L A A +G
Sbjct: 53 QGVVAHKVVDVD-LRSIGGSALTADIDVPEAGGAGIPVTYVPARNTIMLSLALGWAEVVG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
++ GV DYSGYPDCR + +RA E NL ++ V VH PL +L K + +
Sbjct: 112 ANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY D G C C AC LR G+ +
Sbjct: 172 AGVRLG------VDFGLTVSCYNADAD-----GRACGHCDACRLRAAGFADAG 213
>gi|319786289|ref|YP_004145764.1| exsB protein [Pseudoxanthomonas suwonensis 11-1]
gi|317464801|gb|ADV26533.1| exsB protein [Pseudoxanthomonas suwonensis 11-1]
Length = 224
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 100/230 (43%), Gaps = 27/230 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ L SGG DS+ L+ A ++ V LS YGQR+ EL+ V +
Sbjct: 2 KKAVALVSGGMDSAVVLAIAREQGFAVHALSVRYGQRHTSELDAAARVASALGAAA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
H L I S+LT ++ + +P T+VP RN I L A A LG
Sbjct: 58 ------HKTVAIDLRSIGGSALTDDIEVPEAGGEGIPVTYVPARNTIMLSAALGWAEVLG 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
+I GV DYSGYPDCR + I A E NL + + + VH PL+ + K E +
Sbjct: 112 AADIFCGVNAVDYSGYPDCRPEFIEAFERLANLATKAGVEGAGIRVHAPLLHMGKDEIVR 171
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + ++ +CY + G C C AC LR G+
Sbjct: 172 EGLRLG------VDFAQTVSCYRAD-----DQGLACGHCDACQLRAAGFA 210
>gi|157414337|ref|YP_001481593.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni 81116]
gi|166218758|sp|A8FJH9|QUEC_CAMJ8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157385301|gb|ABV51616.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni 81116]
gi|315931290|gb|EFV10259.1| 7-cyano-7-deazaguanine synthase [Campylobacter jejuni subsp. jejuni
327]
Length = 224
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
+ AL + SGG DS+ C A + L FDY QR + E EC + K +
Sbjct: 1 MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKERECFKQICKAL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD----NNLPNTFVPGRNIIFLVFAA 120
+ + +IL ++ + DI ++LT K++ + + + P T+VP RN IFL A
Sbjct: 56 ----KVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + + TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVYIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +LA N+ LE + +CY + + C C +C LR +G+ +
Sbjct: 172 KIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKVG 215
>gi|194290404|ref|YP_002006311.1| queuosine biosynthesis protein quec homolog [Cupriavidus
taiwanensis LMG 19424]
gi|254764327|sp|B3R5T4|QUEC_CUPTR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|193224239|emb|CAQ70248.1| queuosine biosynthesis protein QueC putative homolog [Cupriavidus
taiwanensis LMG 19424]
Length = 227
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 67/234 (28%), Positives = 99/234 (42%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS YGQR+ ELE V + + +
Sbjct: 1 MTQRAIVLLSGGLDSATVLAMARAQGFETYALSMRYGQRHSSELEAAKRVAAALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + V +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRRFGGSALTDDALEVPTDGASGGIPVTYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ V VH P++ + K E
Sbjct: 114 GGRDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFRVHAPIIDMTKGEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY D G C C +C +R+ G+
Sbjct: 174 RAGIALG------VDYSLTVSCYQADDD-----GRACGVCDSCRIRRAGFEAAG 216
>gi|294013048|ref|YP_003546508.1| probable transcription regulator ExsB [Sphingobium japonicum UT26S]
gi|292676378|dbj|BAI97896.1| probable transcription regulator ExsB [Sphingobium japonicum UT26S]
Length = 230
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 105/232 (45%), Gaps = 28/232 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS A + R+ LS DY QR+++EL+ V + +
Sbjct: 9 AVVLLSGGLDSMVAGGLAREAGYRLFALSIDYNQRHRLELQAAGRVAAALNAI------- 61
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGI 128
HI+ L S+LT ++A+ +P T+VP RN IFL LA G
Sbjct: 62 ---SHIVLPLDLTAFGGSALTADIAVPKGGVGAGIPITYVPARNTIFLSLTLGLAEVAGA 118
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKL 183
++ IGV DYSGYPDCR + I A + L ++ + ++ PL + K + +
Sbjct: 119 NDVFIGVNALDYSGYPDCRPEFIDAFQKMAALATKAGVEGHPIRINAPLQHMSKADIVRE 178
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A +G L S +CY D G C C +C LR KG++E
Sbjct: 179 AYRLG------LDTGLSWSCYDPTPD-----GRHCGLCDSCRLRSKGFVEAG 219
>gi|332188916|ref|ZP_08390619.1| exsB family protein [Sphingomonas sp. S17]
gi|332011056|gb|EGI53158.1| exsB family protein [Sphingomonas sp. S17]
Length = 231
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 71/239 (29%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ AP A++L SGG DS + A R+ LS DY QR+KVE +
Sbjct: 1 MTSSAPMAVVLVSGGLDSMISAASAKAAGYRILALSVDYNQRHKVE----------LAAA 50
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAAT 121
E HI+ L S+LT ++ + +P T+VP RN IFL A
Sbjct: 51 RRVAVALGAERHIVLPLDLSAFGGSALTADIDVPKDGVQPGIPVTYVPARNTIFLSLALG 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLK 176
A G ++ IGV DYSGYPDCR + + A E + ++ V +H PL +
Sbjct: 111 WAEAAGARDLFIGVNALDYSGYPDCRPEFVAAFEGLAEIATKAGVEGQPFKIHAPLQHMT 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + +G + + S +CY G C C +C LR KG+ E
Sbjct: 171 KADIVREGTRLG------VDMGLSWSCYD-----PAPGGLHCGRCDSCRLRSKGFEEAG 218
>gi|254425193|ref|ZP_05038911.1| exsB protein [Synechococcus sp. PCC 7335]
gi|196192682|gb|EDX87646.1| exsB protein [Synechococcus sp. PCC 7335]
Length = 243
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 34/244 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K +P A++L SGG DS+TC + A+ V LSF+YGQR+ EL + +
Sbjct: 1 MKPSPKAVVLLSGGLDSATCAAQAIADGYDVIALSFNYGQRHDRELLAARELVSAL---- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN------LPNTFVPGRNIIFLVF 118
+ E I+ + L SSLT + + +P+T+VPGRN +F+
Sbjct: 57 -----DITEHQIIDI-NLAQWGGSSLTDRTMVIPTEGKDLDAKVIPSTYVPGRNTVFIAI 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
A +LA G I +G+ DYSGYPDCR D + A +T +L ++ + + PL+
Sbjct: 111 ALSLAEASGAIAIYLGINAVDYSGYPDCRPDYLAAFQTLASLSSKAGLENRAPKLVAPLI 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + A ++G + +E++ +CY G+ C C +C +R ++
Sbjct: 171 SDSKVDIVHRALNLG------VPIEKTWSCYSGED-------LPCGRCDSCRIRNDALVK 217
Query: 234 FKEK 237
+
Sbjct: 218 AGRR 221
>gi|218246824|ref|YP_002372195.1| exsB protein [Cyanothece sp. PCC 8801]
gi|218167302|gb|ACK66039.1| exsB protein [Cyanothece sp. PCC 8801]
Length = 225
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A++L SGG DS+T + AL + + LS YGQR++ EL + K +
Sbjct: 1 MIHQSKAVVLLSGGLDSATSAAIALSQGYHLIALSLRYGQRHEKELAAAKNIAKALD--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAA 120
+H + L S+LT I N +P+T+VPGRN +F+ A
Sbjct: 58 -------ITEHYIVEVNLAQWGGSALTDTALTLPQGGINPNIIPSTYVPGRNTVFIAIAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWL 175
+LA G T I +G+ DYSGYPDCR D ++A + NL ++ + H PL+
Sbjct: 111 SLAEAKGATAIFLGINAVDYSGYPDCRPDYLQAYQRLANLSSKAGIEGHAPQLIAPLIND 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + A +G + +E++ +CY G C C +C +R + +E
Sbjct: 171 SKVDIVRRAVSLG------VPIEDTWSCYQGGEKP-------CGLCDSCRIRDRALIEAG 217
>gi|283953651|ref|ZP_06371182.1| exsB protein [Campylobacter jejuni subsp. jejuni 414]
gi|283794692|gb|EFC33430.1| exsB protein [Campylobacter jejuni subsp. jejuni 414]
Length = 226
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 30/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
+ AL + SGG DS+ C A ++ L FDY QR + E +C + K +
Sbjct: 1 MSKKALCIISGGMDSTLCAYLAKKEDYKIIALHFDYEQRTQEKERDCFEQICKAL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD----NNLPNTFVPGRNIIFLVFAA 120
+ + +IL ++ + DI ++LT KN+ + + + P T+VP RN IFL A
Sbjct: 56 ----KVEKSYILDVSFIKDIGGNALTDKNIDIPKNELCINDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + + TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQKFINEGTSKNFKVCIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ KLA N+ LE + +CY + + C C +C LR +G+ +
Sbjct: 172 QIVKLALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAG 215
>gi|146295173|ref|YP_001178944.1| exsB protein [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|167016419|sp|A4XFR8|QUEC_CALS8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|145408749|gb|ABP65753.1| preQ(0) biosynthesis protein QueC [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 225
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++ SGG DS+T L ++ T+SF YGQ++ ELE KK EL+
Sbjct: 2 RAVVVLSGGMDSTTLLYDVKNQGYETYTISFLYGQKHSKELE----FAKKTCELLKVP-- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ ++ D++ S+LTK+ D ++ T VP RN++FL A + A
Sbjct: 56 ----HKIVDISFFADLAPSALTKSSWSVPEGYYTDESMKQTVVPNRNMVFLSLATSYAIS 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
L + G D+ YPDCR + + A++ +I L V + P + LKK + K+
Sbjct: 112 LKAQKLFYGAHAGDHPIYPDCRKEFVEAMKRSILLCDYQIVELEAPYVDLKKEDILKIGL 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +CY G C C C R + + + K
Sbjct: 172 KLG------VDYSLTWSCYKGGEK-------ACGRCGTCTERIEAFRKIGVK 210
>gi|113868782|ref|YP_727271.1| PP-loop superfamily ATPase [Ralstonia eutropha H16]
gi|123032775|sp|Q0K7W8|QUEC_RALEH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|113527558|emb|CAJ93903.1| Predicted PP-loop superfamily ATPase [Ralstonia eutropha H16]
Length = 227
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 101/237 (42%), Gaps = 29/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS YGQR+ ELE V +
Sbjct: 1 MTKRAIVLLSGGLDSATVLAMARAQGFETYALSMRYGQRHSSELEAARRVAAALGA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
I+ L L S+LT + V + +P T+VP RN I L A A
Sbjct: 57 -----TRHEIIDLD-LRRFGGSALTDDALAVPTDGASDGIPVTYVPARNTIMLSLALGWA 110
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKY 178
+G ++ G DYSGYPDCR + + A ET NL ++ V VH P++ + K
Sbjct: 111 EAVGGRDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFRVHAPIIDMTKG 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + +G + + +CY D G C C +C +R+ G+
Sbjct: 171 EIIRAGIALG------VDYSLTVSCYQADDD-----GRACGVCDSCRIRRAGFEAAG 216
>gi|57169010|ref|ZP_00368138.1| exsB protein [Campylobacter coli RM2228]
gi|57236928|ref|YP_178043.1| ExsB [Campylobacter jejuni RM1221]
gi|86150544|ref|ZP_01068768.1| exsB protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86152354|ref|ZP_01070564.1| exsB protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|86153997|ref|ZP_01072199.1| exsB protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|218561709|ref|YP_002343488.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|305432554|ref|ZP_07401715.1| transcription regulator ExsB [Campylobacter coli JV20]
gi|315123629|ref|YP_004065633.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|81354271|sp|Q5HXE2|QUEC_CAMJR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|166218759|sp|P0C634|QUEC_CAMJE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|57019555|gb|EAL56245.1| exsB protein [Campylobacter coli RM2228]
gi|57165732|gb|AAW34511.1| ExsB [Campylobacter jejuni RM1221]
gi|85838996|gb|EAQ56261.1| exsB protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85840651|gb|EAQ57903.1| exsB protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|85842535|gb|EAQ59748.1| exsB protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|112359415|emb|CAL34197.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|284925319|gb|ADC27671.1| ExsB [Campylobacter jejuni subsp. jejuni IA3902]
gi|304444265|gb|EFM36917.1| transcription regulator ExsB [Campylobacter coli JV20]
gi|307746979|gb|ADN90249.1| Queuosine biosynthesis protein queC [Campylobacter jejuni subsp.
jejuni M1]
gi|315017351|gb|ADT65444.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315057457|gb|ADT71786.1| Queuosine Biosynthesis QueC ATPase [Campylobacter jejuni subsp.
jejuni S3]
gi|315929942|gb|EFV09099.1| Transcriptional regulator ExsB [Campylobacter jejuni subsp. jejuni
305]
Length = 224
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
+ AL + SGG DS+ C A + L FDY QR + E EC + K +
Sbjct: 1 MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKEKECFKQICKAL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD----NNLPNTFVPGRNIIFLVFAA 120
+ + +IL ++ + DI ++LT K++ + + + P T+VP RN IFL A
Sbjct: 56 ----KVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + + TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +LA N+ LE + +CY + + C C +C LR +G+ +
Sbjct: 172 KIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAG 215
>gi|209527869|ref|ZP_03276358.1| exsB protein [Arthrospira maxima CS-328]
gi|209491672|gb|EDZ92038.1| exsB protein [Arthrospira maxima CS-328]
Length = 226
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 107/239 (44%), Gaps = 37/239 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-------VRKKIVE 62
A++L SGG DSST L A LSF+Y QR+ ELE ++VE
Sbjct: 2 KAVILLSGGLDSSTVLYQAKADGCECYALSFNYQQRHLRELEAAAKIAEAAGVAAHQVVE 61
Query: 63 L-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ +W S DH + L ++ S T +P T+VP RN IFL A
Sbjct: 62 FDLKRWGGSALTDHNIDLPCDRTLAEMSAT-----------IPITYVPARNTIFLSLALA 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLK 176
+G I IGV DYSGYPDCR D I A+++ LG + +T++TPL+ LK
Sbjct: 111 YGETIGADRIYIGVNALDYSGYPDCRPDYIAAMQSVFRLGTKQGREGNAITINTPLIDLK 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + +L +G + E + +CY G+ C C AC LR +
Sbjct: 171 KTDIIQLGNSLG------VPWEYTWSCYGGEAQ-------ACGVCDACRLRLAAFEALG 216
>gi|172036294|ref|YP_001802795.1| transcription regulator [Cyanothece sp. ATCC 51142]
gi|171697748|gb|ACB50729.1| transcription regulator [Cyanothece sp. ATCC 51142]
Length = 233
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 32/240 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ P A++L SGG DS+T + A+D+ V LS YGQR++ EL+ + + +
Sbjct: 1 MTNKPVAVVLLSGGLDSATSAAIAIDQGYEVIALSLRYGQRHQRELDAAKIIAQTL---- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + + + SSLT + +P+T+VPGRN +F+ A
Sbjct: 57 -----NITQHYTIDV-NIAQWGGSSLTDTSLSLPQSGVDATIIPSTYVPGRNTVFIALAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWL 175
+LA G I +G+ DYSGYPDCR D ++A +T NL ++ + + PL+
Sbjct: 111 SLAEAKGAQAIYLGINAVDYSGYPDCRPDYLQAYQTLANLSSKAGLVGKAPQLLAPLITK 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K A +G + + ++ +CY G+++ C C +C +R + +E
Sbjct: 171 TKVDIIKDAIKLG------VPITKTWSCYQGEQEP-------CGLCDSCRIRDQALIEAG 217
>gi|17545457|ref|NP_518859.1| signal peptide protein [Ralstonia solanacearum GMI1000]
gi|81506162|sp|Q8Y1F2|QUEC_RALSO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|17427749|emb|CAD14268.1| hypothetical signal peptide protein [Ralstonia solanacearum
GMI1000]
Length = 224
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A + LS YGQR+ ELE V + + +
Sbjct: 1 MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + V +P T+VP RN I L A A +
Sbjct: 61 IVD-------LDLRRFGGSALTDDALEVPTTGVQEGIPITYVPARNTIMLSLALGWAEAV 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ H+ V+ P++ + K E
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDHIRVNAPIIAMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ +G + + +CY + G C C +C +R+ G+
Sbjct: 174 QAGARLG------VDYSLTVSCYQADDE-----GRACGVCDSCRIRRAGFE 213
>gi|220919027|ref|YP_002494331.1| exsB protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956881|gb|ACL67265.1| exsB protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 234
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 101/249 (40%), Gaps = 34/249 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M KA A++L SGG DSSTCL+ A LS DYGQR+K EL
Sbjct: 1 MAKATSKARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGEL---------- 50
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNI 113
+ H + L S+LT + ++P T+VP RN
Sbjct: 51 ARARRIARALGAAGHRVVKVDLSAFGGSALTDAAIAVPKGRSEARMARDIPVTYVPARNT 110
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TV 168
+ L A A +G I +GV DYSGYPDCR +RA E + + V +
Sbjct: 111 VMLSLALAHAEVIGAEQIFVGVNAIDYSGYPDCRPAFLRAFERLAKVATRAGVEGRPLRI 170
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
PL+ L K +L + + + +CY R G C C AC LR+
Sbjct: 171 RAPLLRLSKAGIVRLGTKL------RVPYRLTLSCYDPIR------GRACGRCDACRLRR 218
Query: 229 KGWMEFKEK 237
KG+ E +
Sbjct: 219 KGFAEAGVQ 227
>gi|283956194|ref|ZP_06373679.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni 1336]
gi|283792348|gb|EFC31132.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni 1336]
Length = 224
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
+ AL + SGG DS+ C A + L FDY QR + E EC + K +
Sbjct: 1 MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKERECFKQICKAL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD----NNLPNTFVPGRNIIFLVFAA 120
+ + +IL ++ + DI ++LT K++ + + + P T+VP RN IFL A
Sbjct: 56 ----KVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + + TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +LA N+ LE + +CY K + C C +C LR +G+ +
Sbjct: 172 KIVELALK------ENVPLELTWSCYESKDE-------ACGECDSCLLRLRGFEKAG 215
>gi|85709640|ref|ZP_01040705.1| ExsB [Erythrobacter sp. NAP1]
gi|85688350|gb|EAQ28354.1| ExsB [Erythrobacter sp. NAP1]
Length = 232
Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 107/235 (45%), Gaps = 28/235 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
P A++L SGG DS + AL+ V L+ DYGQR++ EL + +K+ +L +
Sbjct: 10 RPKAVVLLSGGLDSMVSAATALENGFDVHALTIDYGQRHRRELAAARSIAEKL-DLSSQT 68
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYR 125
+ +L L S+LT + + +++P T+VP RN++FL A
Sbjct: 69 ELALD---------LTAFGGSALTDEIDVPKGGVGDDIPVTYVPARNLVFLALTTACAEA 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
G +I IGV DYSGYPDCR + I + LG ++ V +H PL + K +
Sbjct: 120 AGANDIFIGVNALDYSGYPDCRPEFIASFAETAKLGTKAGVEAAPFKIHAPLQNMTKADI 179
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + L S +CY G C C +C LR+KG+ E
Sbjct: 180 ARECARL------RLDPSWSWSCYD-----PTPEGLACGLCDSCRLRKKGFEEAG 223
>gi|88597669|ref|ZP_01100902.1| exsB protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|88189973|gb|EAQ93949.1| exsB protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|315928446|gb|EFV07758.1| thiamine biosynthesis family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 224
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
+ AL + SGG DS+ C A + L FDY QR + E EC + K +
Sbjct: 1 MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKEKECFKQICKAL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD----NNLPNTFVPGRNIIFLVFAA 120
+ + +IL ++ + DI ++LT K++ + + + P T+VP RN IFL A
Sbjct: 56 ----KVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKY 178
+LA + ++ IGV E D SGYPDC + I+ + IN G + + TPL+ L K
Sbjct: 112 SLAEKENCESVFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +LA N+ LE + +CY + + C C +C LR +G+ +
Sbjct: 172 KIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAG 215
>gi|145588460|ref|YP_001155057.1| exsB protein [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|189038942|sp|A4SVH9|QUEC_POLSQ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|145046866|gb|ABP33493.1| preQ(0) biosynthesis protein QueC [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 246
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 74/244 (30%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
K A++LFSGG DS+T L+ A D LS YGQR+ EL + K+I
Sbjct: 13 PRKDGAPAVILFSGGLDSTTVLALAKDLGYTPYALSVGYGQRHSSELAAAKHIAKQI--- 69
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFA 119
+ ++ L L S+LT + +D +P T+VP RN I L A
Sbjct: 70 ------GVARHEVVNLD-LTRFGGSALTDSSIAVPTTPGKDQEIPVTYVPARNTILLSLA 122
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM---------ESHVTVHT 170
A LG ++ G DYSGYPDCR + + + ET NL E+ VH
Sbjct: 123 LGWAESLGGLDVFYGANSVDYSGYPDCRPEYVASFETMANLATKAGVEAINNENRFRVHA 182
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
P++ L K E +L +G + ++ +CY + G C C +C LRQ G
Sbjct: 183 PIISLTKAEIIQLGSTLG------VDYSQTVSCYQA-----NDLGEACGECESCRLRQIG 231
Query: 231 WMEF 234
+ +
Sbjct: 232 FKQA 235
>gi|121612477|ref|YP_999736.1| exsB protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|148926832|ref|ZP_01810511.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|167004712|ref|ZP_02270470.1| exsB protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|205355756|ref|ZP_03222526.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|167016421|sp|A1VX95|QUEC_CAMJJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|87248967|gb|EAQ71929.1| exsB protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|145844557|gb|EDK21664.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|205346533|gb|EDZ33166.1| putative transcriptional regulatory protein [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 224
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 32/238 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
+ AL + SGG DS+ C A + L FDY QR + E EC + K +
Sbjct: 1 MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKEKECFKQICKAL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL------PNTFVPGRNIIFLVFA 119
+ + +IL ++ + DI ++LT ++ I N L P T+VP RN IFL A
Sbjct: 56 ----KVEKSYILDVSFIKDIGGNALTDK-SIDIPKNELCISDVPPITYVPFRNGIFLSIA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKK 177
+LA + +I IGV E D SGYPDC + I+ + IN G + + TPL+ L K
Sbjct: 111 GSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +LA N+ LE + +CY + + C C +C LR +G+ +
Sbjct: 171 AKIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAG 215
>gi|153950993|ref|YP_001397288.1| exsB protein [Campylobacter jejuni subsp. doylei 269.97]
gi|167016420|sp|A7H1A8|QUEC_CAMJD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|152938439|gb|ABS43180.1| exsB protein [Campylobacter jejuni subsp. doylei 269.97]
Length = 224
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 32/238 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
+ AL + SGG DS+ C A + L FDY QR + E EC + K +
Sbjct: 1 MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKEKECFKQICKAL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL------PNTFVPGRNIIFLVFA 119
+ + +IL ++ + DI ++LT ++ I N L P T+VP RN IFL A
Sbjct: 56 ----KVEKSYILDVSFIKDIGGNALTDK-SIDIPKNELCISDIPPITYVPFRNGIFLSIA 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKK 177
+LA + +I IGV E D SGYPDC + I+ + IN G + + TPL+ L K
Sbjct: 111 GSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +LA N+ LE + +CY + + C C +C LR +G+ +
Sbjct: 171 AKIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAG 215
>gi|94311604|ref|YP_584814.1| ExsB [Cupriavidus metallidurans CH34]
gi|110816250|sp|Q1LJY1|QUEC_RALME RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|93355456|gb|ABF09545.1| Queuosine biosynthesis protein queC [Cupriavidus metallidurans
CH34]
Length = 227
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 67/234 (28%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L+ A LS YGQR+ ELE V ++ +
Sbjct: 1 MTKRAIVLLSGGLDSATVLAMANAAGFETYALSMRYGQRHSSELEAAKRVAAELGAKRHE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L L G + + +V +P T+VP RN I L A A +
Sbjct: 61 IID-------LDLRRFGGSALTDDALDVPTDGAAGGIPITYVPARNTIMLSLALGWAEAI 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
G ++ G DYSGYPDCR + + A ET NL ++ V VH P++ + K E
Sbjct: 114 GGRDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFHVHAPIIDMTKAEII 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY D G C C +C +R+ G+
Sbjct: 174 LAGVKLG------VDYGLTVSCYKADDD-----GRACGVCDSCRIRRAGFEAAG 216
>gi|269836354|ref|YP_003318582.1| exsB protein [Sphaerobacter thermophilus DSM 20745]
gi|269785617|gb|ACZ37760.1| exsB protein [Sphaerobacter thermophilus DSM 20745]
Length = 230
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 31/235 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + P A++L SGG DS+T A + LSFDYGQR++ EL+
Sbjct: 1 MQAQANERPGAVVLLSGGVDSTTVAYLARASGYAIYALSFDYGQRHRRELDA-------- 52
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVF 118
+ +H + L I SSLT + + + +P+T+VP RN IFL
Sbjct: 53 --AAAVARAVEAVEHRVVRIDLAGIGGSSLTGHGEIPTGGVTDGIPSTWVPARNHIFLAV 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPL 172
A+ A +G I IGV + DYSGYPDCR + + A + A +L + + V PL
Sbjct: 111 ASGYAEVVGARAIYIGVSQVDYSGYPDCRAEFLEAYQRAADLASKQFVEEGRSIPVVAPL 170
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ L K T +L +G + + +CY G C C +C LR
Sbjct: 171 LHLSKAGTVRLGLALG------VDYGLTWSCYQGGESP-------CGVCDSCRLR 212
>gi|152996127|ref|YP_001340962.1| exsB protein [Marinomonas sp. MWYL1]
gi|189038923|sp|A6VX48|QUEC_MARMS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|150837051|gb|ABR71027.1| exsB protein [Marinomonas sp. MWYL1]
Length = 219
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++++SGG DS T L+ A+ V LSF+YGQ++ ELE V +K+
Sbjct: 1 MSEKAVVVYSGGMDSFTVLNTAIQNGLDVYALSFNYGQKHSKELEVAAHVCRKLG----- 55
Query: 67 WKDSLGEDHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
++ + + + ++SSLT + + +D+N+ +T VP RN++ L A
Sbjct: 56 -----ISHKVVDITAINSLMANSSLTGDAEIPEGHYEDDNMKSTVVPNRNMVLLSMAIAY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + G D+ YPDCR + + A+ + V + TP + K E K
Sbjct: 111 AVSLEAGKVYYGAHSGDHHIYPDCRPEFVEAMNAVSKIANYQSVEIVTPFLHSSKGEILK 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
D+ NL + TCY G+ C C ACY R + + E
Sbjct: 171 AGLDM------NLNYANTWTCYNGREKS-------CGKCGACYERLEAFAE 208
>gi|78780169|ref|YP_398281.1| ExsB [Prochlorococcus marinus str. MIT 9312]
gi|110816241|sp|Q317V0|QUEC_PROM9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78713668|gb|ABB50845.1| preQ(0) biosynthesis protein QueC [Prochlorococcus marinus str. MIT
9312]
Length = 224
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K S ++L SGG DSST S A ++ LSFDYGQR+K EL + K
Sbjct: 1 MTLKNKSIVVLLSGGLDSSTVTSIAKKSEAKIFGLSFDYGQRHKKELHSASTIAKHF--- 57
Query: 64 MPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAA 120
+ E I+ L++ G S + KN+ + +Q N +PNT+VPGRN IF+ A
Sbjct: 58 ------DIQEFKIIKLDLSLWGGSSLTDTKKNIPTEGVQTNKIPNTYVPGRNTIFISVAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWL 175
+ A + I +GV DYSGYPDCR D I+ + +L + + + TPL+ L
Sbjct: 112 SYAEAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDL 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + +LA D ++ L+++ +CY G C C +C +R +
Sbjct: 172 NKEQIIQLAMD------NHVPLDKTWSCYSGDAKP-------CGKCDSCRIRNTAY 214
>gi|315126984|ref|YP_004068987.1| regulator protein [Pseudoalteromonas sp. SM9913]
gi|315015498|gb|ADT68836.1| regulator protein [Pseudoalteromonas sp. SM9913]
Length = 218
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++++SGG DS T L+ AL + V LSFDYGQR+ EL+ V +K+
Sbjct: 1 MTQKVVVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAASVCEKLN----- 55
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ + I SSLT ++ + ++ ++ +T VP RN+I L A
Sbjct: 56 -----VPHKIVDISAINQLIGGSSLTDDIDVPEGHYEEESMKSTIVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + + G D++ YPDCR + ++ ++ + V + +P + K +
Sbjct: 111 AVSLKASKVYYGAHSGDHAIYPDCRPEFVKKMDDVCRIANYDAVEIFSPYLNNTKIDILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G L ++ TCY G+ C C AC R + +
Sbjct: 171 DGIKMG------LDYSQTWTCYNGRDK-------ACGKCGACQERLEAFE 207
>gi|254282794|ref|ZP_04957762.1| exsB protein [gamma proteobacterium NOR51-B]
gi|219678997|gb|EED35346.1| exsB protein [gamma proteobacterium NOR51-B]
Length = 224
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 28/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A++L SGG DS+T L+ A + LSFDYGQR++ EL+ V +
Sbjct: 2 SSKKAVVLVSGGLDSATVLAMAAAAGRQCFALSFDYGQRHRAELKAAAHVASSVP----- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAY 124
G H + L I S+LT ++A+ +P T+VP RN +FL A A
Sbjct: 57 -----GTVHKVVQLDLSTIGGSALTDTSIAVPTSPTEGIPVTYVPARNTVFLSIALGWAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLKKYE 179
L I IGV DYSGYPDCR I A + + ++ V H TP++ + K +
Sbjct: 112 VLDADEIHIGVNAVDYSGYPDCRPAFIDAFRSLAAVATKAGVEGHPLAVCTPIIDMTKGD 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ ++G + + +CY + G C C +C LR+ G+ E
Sbjct: 172 IIRAGTELG------VDYALTVSCYQPDGE-----GLACGRCDSCRLRRAGFREAG 216
>gi|33241304|ref|NP_876246.1| PP-loop superfamily ATPase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|81663872|sp|Q7V9H8|QUEC_PROMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33238834|gb|AAQ00899.1| Predicted PP-loop superfamily ATPase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 227
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 32/241 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+++ P + L SGG DS+T + A+++ V LSFDYGQR+K ELE + +
Sbjct: 3 LEERPKTIALLSGGLDSATATAIAIEQGHNVIGLSFDYGQRHKRELEAAKLLANHL---- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMK---IQDNNLPNTFVPGRNIIFLVFAA 120
L E HI+ + L SSLT N ++ + +PNT+VPGRN +F+
Sbjct: 59 -----KLIEHHIIDI-NLSTWGGSSLTDLNESIPKTGVLPGVIPNTYVPGRNTVFIAIGL 112
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
+LA +V+G+ DYSGYPDCR D + + NL + + + + PL+
Sbjct: 113 SLAEARNAKQLVLGINAMDYSGYPDCRPDYLDEFQKLANLASKAGREGNGIKLLAPLIHW 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + A + ++ ++ + +CY G ++ C C +C +R + +
Sbjct: 173 NKIQIVQEALRL------DIPIDLTWSCYNGDTEE-------CGLCDSCRIRNEALQSVR 219
Query: 236 E 236
Sbjct: 220 S 220
>gi|154149359|ref|YP_001406321.1| ExsB protein [Campylobacter hominis ATCC BAA-381]
gi|189038903|sp|A7I1D0|QUEC_CAMHC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|153805368|gb|ABS52375.1| ExsB protein [Campylobacter hominis ATCC BAA-381]
Length = 220
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A+ + SGG DSST A ++ + L FDY QR K E EC + +
Sbjct: 2 KAVCVISGGMDSSTAAFIAKEQGYEILALHFDYNQRTMKKERECFNLICDDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ IL ++ + I +SLT ++ +PNT+VP RN IFL AA A
Sbjct: 54 -GVKSREILDVSFIAQIGANSLTDKNLTIQKTGVKSGEIPNTYVPFRNGIFLSVAAAFAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKYETWK 182
+ G + IGV E D SGYPDC + I+ IE+AIN G + + PL+ L K + K
Sbjct: 113 KEGADALFIGVVEEDSSGYPDCSENFIKKIESAINAGTSPNFKLEIKIPLVHLSKTQIVK 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
A +IG + LE + +CY + C C +C LR KG+
Sbjct: 173 KALEIG------VPLEHTWSCYEREDK-------ACGFCDSCRLRLKGFK 209
>gi|226354846|ref|YP_002784586.1| Queuosine biosynthesis protein [Deinococcus deserti VCD115]
gi|226316836|gb|ACO44832.1| putative Queuosine biosynthesis protein [Deinococcus deserti
VCD115]
Length = 237
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 34/242 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + A++L SGG DSST L A LSF YGQR+ VEL+ + +
Sbjct: 1 MTTQQKRAVVLLSGGLDSSTVLGIATRRDGYTCAALSFRYGQRHTVELDRAAQIARHF-- 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNN-LPNTFVPGRNIIFLVF 118
G +H + LG S+LT V D+ +P T+VPGRN +F+
Sbjct: 59 ---------GAEHRIIDINLGSFGGSALTDETITVPTDGADDGVIPPTYVPGRNTVFIAI 109
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLM 173
+LA +G I +G+ DYSGYPDCR + + A + NL ++ + H PL+
Sbjct: 110 GLSLAEAIGAERIYLGINAVDYSGYPDCRPEYLEAYQHLANLATKAGLEGHGAALVAPLL 169
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ K + A ++G + ++ + +CY G + C C +C +R + E
Sbjct: 170 HMTKVDIVNAALELG------VPVDVTWSCYQGGTEP-------CGVCDSCRIRDRALTE 216
Query: 234 FK 235
Sbjct: 217 AG 218
>gi|313682542|ref|YP_004060280.1| preq(0) biosynthesis protein quec [Sulfuricurvum kujiense DSM
16994]
gi|313155402|gb|ADR34080.1| preQ(0) biosynthesis protein QueC [Sulfuricurvum kujiense DSM
16994]
Length = 221
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 70/236 (29%), Positives = 106/236 (44%), Gaps = 28/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
AL + SGG DS+ R + L F+YGQR EL C + K +
Sbjct: 1 MMKKALCIMSGGMDSTLVAYIMRSRGYEIVALHFNYGQRTVAKELSCFREICKDL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ E + + L I S+LT +V + +P T+VP RN IFL A +
Sbjct: 56 ----GVNEKYEIDLDFFKTIGASALTDHSIDVPTGGIEPGVPITYVPFRNGIFLSIATAI 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYET 180
A + G + I IGV E D SGYPDCR I A A NLG + +++++ PL+ L+K +
Sbjct: 112 AEKEGCSAIAIGVVEEDSSGYPDCRESFIDAFTKAANLGTKESTNLSIEMPLVRLQKSQI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ A + ++ L + +CY + C C +C LR +G+
Sbjct: 172 VQEAIQL------DVPLHLTWSCYSSEDK-------ACGVCDSCRLRLRGFERAGA 214
>gi|197124245|ref|YP_002136196.1| exsB protein [Anaeromyxobacter sp. K]
gi|196174094|gb|ACG75067.1| exsB protein [Anaeromyxobacter sp. K]
Length = 234
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 102/249 (40%), Gaps = 34/249 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M +A A++L SGG DSSTCL+ A LS DYGQR+K EL
Sbjct: 1 MAKATSEARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGEL---------- 50
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNI 113
+ H + L S+LT + ++P T+VP RN
Sbjct: 51 ARARRIARALGAAGHRVVKVDLSAFGGSALTDAAIAVPKGRSEARMARDIPVTYVPARNT 110
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TV 168
+ L A A +G I +GV DYSGYPDCR +RA E + + V +
Sbjct: 111 VMLSLALAHAEVIGAEQIFVGVNAIDYSGYPDCRPAFLRAFERLAKVATRAGVEGRPLRI 170
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
PL+ L K +L +G + + +CY R G C C AC LR+
Sbjct: 171 RAPLLRLSKAGIVRLGTKLG------VPYRMTLSCYDPIR------GRACGRCDACRLRR 218
Query: 229 KGWMEFKEK 237
KG+ E +
Sbjct: 219 KGFAEAGVQ 227
>gi|77360059|ref|YP_339634.1| regulator protein [Pseudoalteromonas haloplanktis TAC125]
gi|110816244|sp|Q3IKE8|QUEC_PSEHT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|76874970|emb|CAI86191.1| putative regulator protein [Pseudoalteromonas haloplanktis TAC125]
Length = 218
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++++SGG DS T L+ AL + V LSFDYGQR+ EL+ V K++
Sbjct: 1 MTQKVVVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAAQVCKQLN----- 55
Query: 67 WKDSLGEDHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ + I SSLT ++ + +++++ +T VP RN+I L A
Sbjct: 56 -----VPHKIVDISAINQIIGGSSLTDDIDVPEGHYEEDSMKSTIVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + + G D++ YPDCR + ++ ++ + V + +P + K +
Sbjct: 111 AVSLKASQVYYGAHSGDHAIYPDCRPEFVQKMDDVCRIANYDAVEIFSPYLNNTKIDILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G L ++ TCY G+ C C AC R + +
Sbjct: 171 DGIAMG------LDYSQTWTCYNGREK-------ACGKCGACQERLEAFE 207
>gi|119469470|ref|ZP_01612374.1| putative regulator protein [Alteromonadales bacterium TW-7]
gi|119447005|gb|EAW28275.1| putative regulator protein [Alteromonadales bacterium TW-7]
Length = 218
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++++SGG DS T L+ AL + V LSFDYGQR+ EL+ V +K+
Sbjct: 1 MTQKVVVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAAQVCEKLN----- 55
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ + I SSLT N+ + ++ ++ +T VP RN+I L A
Sbjct: 56 -----VPHKIVDISAINQLIGGSSLTDNIDVPEGHYEEESMKSTIVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + + G D++ YPDCR + ++ ++ + V + +P + K +
Sbjct: 111 AVSLKASQVYYGAHSGDHAIYPDCRPEFVQKMDDVCRIANYDAVEIFSPYLNNTKIDILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G L ++ TCY G+ C C AC R + +
Sbjct: 171 DGIKMG------LDYSQTWTCYNGREK-------ACGKCGACQERLEAFA 207
>gi|332296388|ref|YP_004438311.1| exsB protein [Thermodesulfobium narugense DSM 14796]
gi|332179491|gb|AEE15180.1| exsB protein [Thermodesulfobium narugense DSM 14796]
Length = 216
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 27/223 (12%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
+FSGG DS+T L + L++ +V+T+SF YGQ++K ELEC + +K+ E
Sbjct: 6 IFSGGLDSTTLLYYLLNQGHKVKTISFFYGQKHKKELECSKNIARKLN----------IE 55
Query: 74 DHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ ++ L+ L DI SSLT ++ + D N+ +T VP RN+IFL A + A
Sbjct: 56 NKLIDLSALKDIFGKSSLTSDMDIPEGHYNDTNMKSTVVPNRNMIFLSIAISYAISSNFD 115
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ IGV D++ YPDCR I ++ + S + + P + LKKYE K+ ++
Sbjct: 116 AVSIGVHAGDHAIYPDCRPVFINKMKDVAKVSDYSEIGILAPFLDLKKYEIVKIGLEL-- 173
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ E + TCY G+ C C +C R + +
Sbjct: 174 ----KVPYEMTWTCYKGEEKP-------CLKCGSCTERLEAFE 205
>gi|126180150|ref|YP_001048115.1| exsB protein [Methanoculleus marisnigri JR1]
gi|189038925|sp|A3CXN3|QUEC_METMJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|125862944|gb|ABN58133.1| preQ(0) biosynthesis protein QueC [Methanoculleus marisnigri JR1]
Length = 222
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
A+ L SGG DS+T A D + L F YGQR + E EC V K + L
Sbjct: 2 KKAVCLLSGGMDSTTLAYVAKDTGYDIVALHFTYGQRTEAKERECARAVAKNLDALDFVE 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTK-NVAMKI---QDNNLPNTFVPGRNIIFLVFAATLA 123
+ L I SSLT ++ ++ ++ +P+T+VP RN L A +LA
Sbjct: 62 ---------ISLEHFTKIGASSLTDTSIPVEEYAGEEEGVPSTYVPFRNANLLAIATSLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETW 181
+ IGV DY GYPDCR + I A + A++LG + + TP + + K +
Sbjct: 113 EARRAEAVFIGVQTGDYPGYPDCRPEFIEAFQRAVDLGTAAEPRIVLMTPFVRMSKVDIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + E + +CY C C +C+ R++ + E
Sbjct: 173 RKGLALG------VPYELTWSCYQNDD-------RACGVCSSCHYRREAFRELG 213
>gi|257059865|ref|YP_003137753.1| exsB protein [Cyanothece sp. PCC 8802]
gi|256590031|gb|ACV00918.1| exsB protein [Cyanothece sp. PCC 8802]
Length = 225
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A++L SGG DS+T + AL + + LS YGQR++ EL + K +
Sbjct: 1 MIHQSKAVVLLSGGLDSATSAAIALSQGYHLIALSLRYGQRHEKELAAAKNIAKALD--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAA 120
+H + L S+LT I N +P+T+VPGRN +F+ A
Sbjct: 58 -------ITEHYIVEVNLAQWGGSALTDTALTLPQAGINPNIIPSTYVPGRNTVFIAIAL 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWL 175
+LA G T I +G+ DYSGYPDCR D ++A + NL ++ + H PL+
Sbjct: 111 SLAEAKGATAIFLGINAVDYSGYPDCRPDYLQAYQRLANLSSKAGIEGHAPQLIAPLIND 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + A +G + +E++ +CY G C C +C +R + ++
Sbjct: 171 SKVDIVRRAFSLG------VPIEDTWSCYQGGEKP-------CGLCDSCRIRDRALIDAG 217
>gi|260436436|ref|ZP_05790406.1| ExsB protein [Synechococcus sp. WH 8109]
gi|260414310|gb|EEX07606.1| ExsB protein [Synechococcus sp. WH 8109]
Length = 226
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 30/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A+ L SGG DS+T + AL++ DRV LSFDYGQR++ EL+ + +++
Sbjct: 2 SQRTAIALLSGGLDSATAAALALEQGDRVIGLSFDYGQRHRRELDAAAAIAEQL------ 55
Query: 67 WKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
L E H + LA G + + + ++ +++ ++P T+VPGRN +F+ +LA
Sbjct: 56 ---GLAEHHCISVNLASWGGSALTDASISIPTHGVEEGSIPPTYVPGRNTVFISVGLSLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLKKY 178
G +V+GV DYSGYPDCR D + A +T +L ++ H PL+ K
Sbjct: 113 EARGAERLVLGVNAVDYSGYPDCRPDYLNAFQTLADLASKAGREDHGAQLWAPLVQWSKV 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ A +G + +E + +CY G + C C +C +R E
Sbjct: 173 RIVEEALRLG------VPIETTWSCYSGGT-------HPCGVCDSCRIRDAALREAG 216
>gi|75908579|ref|YP_322875.1| ExsB protein [Anabaena variabilis ATCC 29413]
gi|110816209|sp|Q3MAK6|QUEC_ANAVT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|75702304|gb|ABA21980.1| preQ(0) biosynthesis protein QueC [Anabaena variabilis ATCC 29413]
Length = 227
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 70/238 (29%), Positives = 102/238 (42%), Gaps = 35/238 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A ++SFDY QR++ EL V +
Sbjct: 2 KAVILLSGGLDSSTILYQAKADGCECYSISFDYQQRHRRELHSAFLVAQ---------TA 52
Query: 70 SLGEDHILPLAILGDISHSSLTKN-------VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + ++ L S+LT + ++ N+P T+VP RN IFL FA
Sbjct: 53 GIVQHQVVNFD-LRLWGGSALTDDKIDLPQERSVDAMSQNIPVTYVPARNTIFLSFALAY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKK 177
A + + IGV DYSGYPDCR D I A++ LG + + + PL+ LKK
Sbjct: 112 AEAIAAERVYIGVNALDYSGYPDCRPDYIEAMQEVFRLGTKQGREGQPINIVAPLINLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+L +G + + +CY G C C +C LR + E
Sbjct: 172 TAIIQLGNQLG------VPWNLTWSCYNGGD-------VACGVCDSCRLRLAAFAELG 216
>gi|157165515|ref|YP_001466416.1| ExsB protein [Campylobacter concisus 13826]
gi|189038900|sp|A7ZCA8|QUEC_CAMC1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157101540|gb|EAT99024.2| ExsB protein [Campylobacter concisus 13826]
Length = 221
Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 26/231 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ + SGG DS+ C A V L FDY QR ++ +I E + K
Sbjct: 2 KKAVCIMSGGMDSTLCAVMAKRAGYDVVALHFDYNQRT---MKREKRAFDEICERLGVVK 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
L ++ + I ++LT +D N++PNT+VP RN +F+ AA LA +
Sbjct: 59 KIN-----LDVSFIAQIGGNALTDTSMQIRKDGVSNDVPNTYVPFRNGVFISIAAALAEK 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKL 183
G I IGV E D SGYPDC+ I++I AINLG + + TPL+ L K +
Sbjct: 114 EGAQAIYIGVVEEDSSGYPDCKESFIKSINEAINLGTSADFSCEIITPLVNLSKADIVSK 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ ++ N +E + +CY + + C C +C LR G+ +
Sbjct: 174 SLEL------NSPIELTWSCYESEDE-------ACGLCDSCRLRLNGFKKA 211
>gi|30248246|ref|NP_840316.1| ExsB protein [Nitrosomonas europaea ATCC 19718]
gi|81584822|sp|Q82XN5|QUEC_NITEU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|30180131|emb|CAD84133.1| ExsB protein [Nitrosomonas europaea ATCC 19718]
Length = 228
Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A LS DYGQR+ EL + + + ++
Sbjct: 2 KKAVVLLSGGMDSATTLAIARQSGFACYALSIDYGQRHVAELAAAARIGQSLQVSDHQFL 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L LA+L + ++ V + +P T+VP RN I L A A LG
Sbjct: 62 K-------LDLAVLASSVLTDISATVPLHGTSTGIPVTYVPARNTIMLALALAWAEVLGS 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I IGV DYSGYPDCR D I A E NL ++ VH PL+ L K E +
Sbjct: 115 HDIFIGVTAVDYSGYPDCRRDYIDAFEKMANLATKAGREGMVLTVHAPLIDLPKREIIQC 174
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++G + + +CY GY C C AC++R+ G+
Sbjct: 175 GMELG------IDYGLTVSCYQADE-----AGYACGQCDACHIRRAGFE 212
>gi|308050952|ref|YP_003914518.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
gi|307633142|gb|ADN77444.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
Length = 220
Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++++SGG DS T L + ++FDYGQR+ E+E V ++
Sbjct: 1 MEKKAVVIYSGGMDSFTVLHKVITEGYTPYAITFDYGQRHDKEVEYAKVVCSELG----- 55
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAA 120
I+ + + IS SSLT++ ++N+ +T VP RN+I + A
Sbjct: 56 -----INHKIIDITAINQLISGSSLTRDSESDIPEGHYAEDNMKSTVVPNRNMILISLAT 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A +G + G D++ YPDCR + + I A + + V +P ++ K E
Sbjct: 111 GYAASIGAGKVFYGAHSGDHAIYPDCRPEFVEKINAATMIANYEPIEVVSPYLYQSKIEI 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K ++G L ++ TCY G+ C C +C R + +
Sbjct: 171 LKDGLEMG------LDYGKTWTCYNGREK-------ACGRCGSCVERLESFE 209
>gi|17232587|ref|NP_489135.1| hypothetical protein alr5095 [Nostoc sp. PCC 7120]
gi|81769494|sp|Q8YM45|QUEC_ANASP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|17134233|dbj|BAB76794.1| alr5095 [Nostoc sp. PCC 7120]
Length = 229
Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L A ++SFDY QR++ EL V +
Sbjct: 2 KAVILLSGGLDSSTILYQAKADGCECYSISFDYQQRHRRELHSAFLVAQ---------TA 52
Query: 70 SLGEDHILPLAILGDISHSSLTKN-------VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + ++ L S+LT + ++ N+P T+VP RN IFL FA
Sbjct: 53 GIVQHQVINFD-LRLWGGSALTDDNIDLPQERSLDAMSQNIPVTYVPARNTIFLSFALAY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKK 177
A + + IGV DYSGYPDCR D I A++ LG + + + PL+ LKK
Sbjct: 112 AEAIAAQRVYIGVNALDYSGYPDCRPDYIEAMQEVFRLGTKQGREGQPINIVAPLINLKK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E +L +G + + +CY G C C +C LR + E
Sbjct: 172 TEIIQLGNQLG------VPWNLTWSCYAGGD-------VACGVCDSCRLRLAAFAELG 216
>gi|312623408|ref|YP_004025021.1| exsb protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312203875|gb|ADQ47202.1| exsB protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 221
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 27/232 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++ SGG DS+T L + V +SF YGQ++ ELE KK L+
Sbjct: 2 KAVVVLSGGMDSTTLLYDVKSQGYEVFAISFLYGQKHSKELE----FAKKTCSLLSIP-- 55
Query: 70 SLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ ++ +++ S+LT D+ + T VP RN++ L +A A
Sbjct: 56 ----HKIVDISFFAELAPSALTALDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAIS 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG + G D+ YPDCR + + A++ A+ L + + P + +KK + K
Sbjct: 112 LGAKKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELDAPYVDMKKEDILKRGL 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + + +CY G + C C C R + + + K
Sbjct: 172 ELG------VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 210
>gi|22299275|ref|NP_682522.1| transcription regulator ExsB-like protein [Thermosynechococcus
elongatus BP-1]
gi|81742784|sp|Q8DI59|QUEC_THEEB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|22295458|dbj|BAC09284.1| tlr1732 [Thermosynechococcus elongatus BP-1]
Length = 233
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 77/243 (31%), Positives = 106/243 (43%), Gaps = 35/243 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A++L SGG DSST L A LSFDYGQR++ ELE + +
Sbjct: 1 MVTTQKAVVLLSGGLDSSTVLFRAKALGYACYALSFDYGQRHRRELEAAIAIA------- 53
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK-------NVAMKIQDNNLPNTFVPGRNIIFLV 117
+ E ILPL L S+LT + + +P T+VP RN IFL
Sbjct: 54 --TSAGVVEHQILPL-NLRLWGGSALTDLSIDLPRDRDLATMSQEIPVTYVPARNTIFLS 110
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPL 172
A A L ++ IGV DYSGYPDCR D I A++ LG + + + TPL
Sbjct: 111 VALAYAEALEARSVHIGVNALDYSGYPDCRPDYIAAMQEVYRLGTKQGREGQPIEIVTPL 170
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K + +L G + E++ +CY + C C AC LR +
Sbjct: 171 IDLHKTDIIRLGHGYG------VPWEKTWSCYSDGQQ-------ACGRCDACRLRLAAFA 217
Query: 233 EFK 235
E
Sbjct: 218 ELG 220
>gi|83649265|ref|YP_437700.1| PP-loop superfamily ATPase [Hahella chejuensis KCTC 2396]
gi|110816229|sp|Q2S7U9|QUEC_HAHCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|83637308|gb|ABC33275.1| predicted PP-loop superfamily ATPase [Hahella chejuensis KCTC 2396]
Length = 231
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 27/234 (11%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+D A+ +FSGG DS T L+ + V LSF+YGQR+ ELEC V + +
Sbjct: 4 SDTSLIPNRAVAIFSGGMDSFTLLNELVQEGKEVFALSFNYGQRHSKELECARQVCESLN 63
Query: 62 ELMPKWKDSLGEDHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLV 117
I+ + + + + SSLT ++ + ++ N+ +T VP RN+I L
Sbjct: 64 ----------IAHKIIDITAINSLLAGSSLTDDIQVPEGHYEEENMKSTVVPNRNMILLS 113
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A A L + G D++ YPDCR + + A L V V P ++ K
Sbjct: 114 LAIGYAVSLKAEAVYYGAHGGDHAIYPDCRPAFVEIMSEASKLANYEPVEVRAPYLYETK 173
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +G L ++ TCY G+ C C +C R + +
Sbjct: 174 IEILRRGLALG------LDYGQTWTCYNGREK-------ACGKCGSCVERLEAF 214
>gi|149377360|ref|ZP_01895105.1| Predicted PP-loop superfamily ATPase [Marinobacter algicola DG893]
gi|149358372|gb|EDM46849.1| Predicted PP-loop superfamily ATPase [Marinobacter algicola DG893]
Length = 221
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 27/230 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++++SGG DS T L A R RV LSFDYGQR+ ELEC V + +
Sbjct: 1 MTETVVVIYSGGMDSFTLLHLARARGYRVHALSFDYGQRHVRELECARQVCEALS----- 55
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
++ + L + ++ S+LT V + +++N+ T VP RN+I L A
Sbjct: 56 -----VPHKVIDIRALSEVMAGSALTDAVDVPEGHYEEDNMKATVVPNRNMILLSLATGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G + G D++ YPDCR + + ++ + V + P M K
Sbjct: 111 AVTAGAVAVWYGAHGGDHAIYPDCRPEFVEKMDAVCQVANYEPVKIEAPFMGSDKGAILA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G L + TCY G+ C C +C R + +
Sbjct: 171 EGLKLG------LDYSRTWTCYNGRD-------RACGVCGSCVERLEAFA 207
>gi|77386124|gb|ABA77541.1| putative transcriptional regulatory protein [Campylobacter jejuni]
Length = 224
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 30/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
+ AL + SGG DS+ C A + L FDY R + E EC + K +
Sbjct: 1 MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEPRTQEKERECFKQICKAL----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD----NNLPNTFVPGRNIIFLVFAA 120
+ + +IL ++ + DI ++LT K++ + + + P T+VP RN IFL A
Sbjct: 56 ----KVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDTPPITYVPFRNGIFLSIAG 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKY 178
+LA + +I IGV E D SGYPDC + I+ + IN G + + TPL+ L K
Sbjct: 112 SLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVYIKTPLVRLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +LA N+ LE + +CY + + C C +C LR +G+ +
Sbjct: 172 KIVELALK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKVG 215
>gi|332993961|gb|AEF04016.1| putative regulator protein [Alteromonas sp. SN2]
Length = 218
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 27/231 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ + ++++SGG DS T L AL V LSFDYGQR+K EL+ V K +
Sbjct: 1 MSENVVVIYSGGMDSFTVLHKALRDGKTVHALSFDYGQRHKKELDYAAAVCKSLN----- 55
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ + I SSLT ++ + ++ ++ T VP RN+I L A
Sbjct: 56 -----VPHKIVDISAINSLIGGSSLTSDIDVPEGHYEEPSMKQTVVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + G D++ YPDCR + + + + + V + TP + K
Sbjct: 111 AVSLEANEVYYGAHSGDHAIYPDCRPEFVEKMSDVCRIANYTPVEIVTPYIKDSKTAILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G L E+ TCY G+ C C AC R + + E
Sbjct: 171 DGLKMG------LDYGETWTCYNGREK-------ACGKCGACEERLEAFRE 208
>gi|67920157|ref|ZP_00513677.1| ExsB [Crocosphaera watsonii WH 8501]
gi|67857641|gb|EAM52880.1| ExsB [Crocosphaera watsonii WH 8501]
Length = 230
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 65/239 (27%), Positives = 120/239 (50%), Gaps = 30/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ P A++L SGG DS+T + A+D+ V LS +YGQR++ ELE + + +
Sbjct: 1 MTHKPIAVVLLSGGLDSATSAAIAIDQGYEVIALSLEYGQRHQRELEAAKTIAEAL---- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAAT 121
++ + +I+ + I S ++++ + N +P+T+VPGRN +F+ A +
Sbjct: 57 -----NITQHYIIDVNIAQWGGSSLTDSSLSLPQGGVDPNEIPSTYVPGRNTVFIGLALS 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
L G T I +G+ DYSGYPDCR + ++A + NL ++ + + PL+
Sbjct: 112 LGEAKGATAIYLGINAVDYSGYPDCRPEYLQAYQNLANLSSKAGIEGKAPQLVAPLISKT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K A +G + + ++ +CY G+++ C C +C +R + +E
Sbjct: 172 KVDIVKDAIRLG------VPISKTWSCYQGEQEP-------CGLCDSCRIRDRALIEAG 217
>gi|332534089|ref|ZP_08409938.1| queuosine biosynthesis QueC ATPase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036526|gb|EGI72994.1| queuosine biosynthesis QueC ATPase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 218
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++++SGG DS T L+ AL + V LSFDYGQR+ EL+ V +K+
Sbjct: 1 MTQKVVVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAASVCEKLN----- 55
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ + I SSLT ++ + ++ ++ +T VP RN+I L A
Sbjct: 56 -----VPHKIVDISAINQLIGGSSLTDDIDVPEGHYEEESMKSTIVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + + G D++ YPDCR + ++ ++ + V + +P + K
Sbjct: 111 AVSLKASQVYYGAHSGDHAIYPDCRPEFVQKMDDVCRIANYDAVEIFSPYLNNTKIGILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++G L ++ TCY G+ C C AC R + +
Sbjct: 171 DGIEMG------LDYSQTWTCYNGREK-------ACGKCGACQERLEAFA 207
>gi|154150640|ref|YP_001404258.1| exsB protein [Candidatus Methanoregula boonei 6A8]
gi|167016434|sp|A7I7A4|QUEC_METB6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|153999192|gb|ABS55615.1| exsB protein [Methanoregula boonei 6A8]
Length = 217
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 27/231 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS+T L +D+ V ++FDY Q++K E+ C K+
Sbjct: 2 KAVLILSGGMDSTTLLYDLIDQGYEVSAITFDYHQKHKKEIACAQKTCAKLS-------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ L++L D++ SSLT+ + ++ T VP RN++FL AA+ A
Sbjct: 54 --IPHKIVNLSVLNDLAPSSLTRADRDVPEGHYAEESMKQTVVPNRNMVFLSLAASYAIG 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+G ++ D++ YPDCR + A+ TA +L + + + P + L K + K
Sbjct: 112 IGAGHLFYAAHAGDHAIYPDCRPVFVSAMSTAFHLCDWNDLVLQVPYLMLSKGDIAKKGI 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+G + + +CY GK C C AC R + + E
Sbjct: 172 GLG------VDYANTWSCYKGKE-------RSCGKCGACTERLEAFREAGA 209
>gi|88604066|ref|YP_504244.1| ExsB [Methanospirillum hungatei JF-1]
gi|110816233|sp|Q2FS65|QUEC_METHJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|88189528|gb|ABD42525.1| preQ(0) biosynthesis protein QueC [Methanospirillum hungatei JF-1]
Length = 220
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
A+ L SGG DSST A + L F YGQR + E EC + + + L
Sbjct: 2 KAVCLLSGGMDSSTLACLAKHDGYDILALHFSYGQRTEEKERECAKRIARHLNAL----- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E + L L + SSLT A + + +P+T+VP RN L A + A
Sbjct: 57 ----EFLEVDLTYLKAVGASSLTDYAMQVKAHEDAGDGIPDTYVPFRNANLLSVATSFAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
G I IGV +DYSGYPDCR + I A + I LG ++ + + TP + L K E K
Sbjct: 113 ARGADAIYIGVQASDYSGYPDCRPEFIDAFQKVITLGTRPDAGIILKTPFVKLNKAEILK 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ D+ N+ E++ +CY E C C +C+ R + + + +
Sbjct: 173 IGMDL------NVPYEDTWSCY-------AENEVACGICGSCHYRLEAFRQIGIQ 214
>gi|239996402|ref|ZP_04716926.1| putative regulator protein [Alteromonas macleodii ATCC 27126]
Length = 218
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ + ++++SGG DS T L AL +V LSF+YGQR+K EL+ V +
Sbjct: 1 MSENVVVIYSGGMDSFTVLHKALKAGKKVHALSFNYGQRHKKELDYAANVCNSLN----- 55
Query: 67 WKDSLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ + I S+LT ++ + ++ ++ T VP RN+I L A
Sbjct: 56 -----VPHKIVDISAINTLIGGSALTSDIEVPEGHYEEPSMKQTVVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + G D++ YPDCR + + + + + VT+ TP + K
Sbjct: 111 AVSLDANEVYYGAHSGDHAIYPDCRPEFVHKMNDVCGIANYTPVTIMTPYIDDSKTAILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G L ++ TCY G+ C C AC R + + E
Sbjct: 171 DGLSMG------LDYGQTWTCYNGREK-------ACGKCGACEERLEAFKE 208
>gi|74318220|ref|YP_315960.1| ExsB ATPase [Thiobacillus denitrificans ATCC 25259]
gi|110816275|sp|Q3SGT8|QUEC_THIDA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|74057715|gb|AAZ98155.1| ExsB ATPase [Thiobacillus denitrificans ATCC 25259]
Length = 224
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 30/237 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P A++L SGG DS+T L+ A + LS DYGQR+ ++
Sbjct: 1 MKPCAIVLLSGGLDSATALAMAREAGFACHALSLDYGQRHTA----------ELAAAARL 50
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLA 123
+H + LGD S+LT + ++ + ++ +P T+VP RN + L A A
Sbjct: 51 AAQLGAVEHRVIRLGLGDFGGSALT-DASIAVPESPVAGIPVTYVPARNTVMLALALAWA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKY 178
LG +I IGV DYSGYPDCR + I A E NL ++ V +H PL L K
Sbjct: 110 EVLGARDIFIGVNAVDYSGYPDCRPEFIEAFERMANLATKAGVEGAQLRIHAPLQHLSKA 169
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E +G + ++ +CY + G C C AC LR++G++
Sbjct: 170 EIIHRGTALG------VDYAQTVSCYQADAE-----GRACGRCDACRLRREGFLAAG 215
>gi|312128629|ref|YP_003993503.1| exsb protein [Caldicellulosiruptor hydrothermalis 108]
gi|311778648|gb|ADQ08134.1| exsB protein [Caldicellulosiruptor hydrothermalis 108]
Length = 234
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 27/235 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A+++ SGG DS+T L + V +SF YGQ++ ELE KK L+
Sbjct: 12 EKMRAVVVLSGGMDSTTLLYDVKSQGYEVFAISFLYGQKHSKELE----FAKKTCSLLSI 67
Query: 67 WKDSLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ +++ S+LT D+ + T VP RN++ L +A
Sbjct: 68 P------HKIVDISFFAELAPSALTTPDWDVPEGYYTDSTMKQTVVPNRNMVLLSISAAY 121
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A LG + G D+ YPDCR + + ++ A+ L + + P + +KK + +
Sbjct: 122 AISLGAKKLFYGAHAGDHPIYPDCRKEFVEVMKNALYLADYIGLELEAPYVDMKKEDILR 181
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + + +CY G + C C C R + + + K
Sbjct: 182 RGLELG------VNYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 223
>gi|113953927|ref|YP_732051.1| exsB protein [Synechococcus sp. CC9311]
gi|113881278|gb|ABI46236.1| exsB protein [Synechococcus sp. CC9311]
Length = 237
Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + A+ RV LSFDYGQR++ EL+ + + K +
Sbjct: 16 TAIALLSGGLDSATAAALAIKSGFRVIGLSFDYGQRHRRELDAAVEIAKAL--------- 66
Query: 70 SLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L E H + LA+ G S + + + ++ + +PNT+VPGRN +F+ +LA
Sbjct: 67 NLAEHHTINVDLAMWGGSSLTDHAQTLPTSGVETSIIPNTYVPGRNTVFIAIGLSLAEAR 126
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +V+GV DYSGYPDCR D + A + +L + H P +W E W Q
Sbjct: 127 GADRLVLGVNAVDYSGYPDCRPDYLEAFQDLADLSSRAGREGHGPKLWAPLVE-WSKQQI 185
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +E + +CY G C C +C +R + +
Sbjct: 186 AEEALHLGIPIERTWSCYSGGD-------VPCGVCDSCRIRDEALLAAG 227
>gi|78214105|ref|YP_382884.1| ExsB [Synechococcus sp. CC9605]
gi|110816272|sp|Q3AGF3|QUEC_SYNSC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78198564|gb|ABB36329.1| ExsB [Synechococcus sp. CC9605]
Length = 226
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 32/238 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+A+ L SGG DS+T + AL++ DRV LSFDYGQR+ EL+ V +++
Sbjct: 2 SQRTAIALLSGGLDSATAAALALEQGDRVIGLSFDYGQRHLRELDAAAAVAQQL------ 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMK---IQDNNLPNTFVPGRNIIFLVFAATL 122
L E H + + L S+LT ++++ +++ +P T+VPGRN +F+ +L
Sbjct: 56 ---GLAEHHCISV-NLASWGGSALTDASISIPTDGVEEGRIPPTYVPGRNTVFISVGLSL 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLKK 177
A G +V+GV DYSGYPDCR D + A +T +L ++ H PL+ K
Sbjct: 112 AEARGAERLVLGVNAVDYSGYPDCRPDYLNAFQTLADLASKAGREGHGAQLWAPLVQWSK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ A +G + +E + +CY G + C C +C +R E
Sbjct: 172 VRIVEEALRLG------VPIETTWSCYSGGT-------HPCGVCDSCRIRDAALREAG 216
>gi|296284927|ref|ZP_06862925.1| exsB protein [Citromicrobium bathyomarinum JL354]
Length = 231
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 104/232 (44%), Gaps = 28/232 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A L SGG DS + A +R V L+ DYGQR+ E+E + K +
Sbjct: 10 AAALLSGGLDSMVAAALARERGHEVHALTIDYGQRHVREIEAARKIAKAL---------G 60
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + L L S+LT ++ + D +P T+VP RN++FL A +G
Sbjct: 61 LASHREITLD-LRKFGGSALTADIDVPKDGVDGTIPVTYVPARNLVFLALTTAFAESIGA 119
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
IVIGV DYSGYPDCR + I + LG ++ + + PL +L K E
Sbjct: 120 GRIVIGVNALDYSGYPDCRPEFIASFAETARLGTKAGIEGGGFAIDAPLQFLGKAEIASE 179
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A +G L S +CY + D G C C +C LR+KG+ +
Sbjct: 180 ANRLG------LDTALSWSCYDPRGD-----GLPCGLCDSCRLRRKGFADAG 220
>gi|126665592|ref|ZP_01736574.1| Predicted PP-loop superfamily ATPase [Marinobacter sp. ELB17]
gi|126630220|gb|EBA00836.1| Predicted PP-loop superfamily ATPase [Marinobacter sp. ELB17]
Length = 222
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 28/236 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++++SGG DS T L A V +SF+YGQR+ EL+C V +++
Sbjct: 1 MTDTVVVIYSGGMDSFTLLHKARADGLNVHAISFNYGQRHVRELDCAQEVCQRLA----- 55
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + +GD ++ S+LT Q+ + +T VP RN+I L A
Sbjct: 56 -----VPHKVIDIRAMGDVMAGSALTSETIDVPEGDYQEGAMKSTVVPNRNMILLALATG 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + + + G D++ YPDCR + + ++ + V V P M K +
Sbjct: 111 YAVTVEASAVWFGAHGGDHAIYPDCRPEFVAKMDAVCKVANYQPVAVEAPFMHFTKGDIL 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
L + NL + TCY G+ C C +C R + + E +++
Sbjct: 171 ALGLQL------NLDYSHTWTCYNGRSK-------ACGRCSSCVERLQAFAEHQQQ 213
>gi|67458609|ref|YP_246233.1| trans-regulatory protein ExsB [Rickettsia felis URRWXCal2]
gi|75536925|sp|Q4UMZ0|QUEC_RICFE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|67004142|gb|AAY61068.1| Trans-regulatory protein ExsB [Rickettsia felis URRWXCal2]
Length = 224
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 32/241 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A + + +SF+YGQRN EL +K+ EL+ ++
Sbjct: 2 KKAVILVSGGADSATVLAIAREMGYEIHAMSFNYGQRNNAEL-------RKVKELIKEYN 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ H + L S+LT N + ++P T+VP RN IFL +A
Sbjct: 55 ---VKQHKIVYIDLRAFGGSALTDNNIDVPHYHDVNELPEDVPVTYVPARNTIFLSYALG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYE 179
A +G +I IGV +D + YPDCR + I++ E NL + +T+HTPL+ + K +
Sbjct: 112 YAEVIGAKDIFIGVHTSDSANYPDCRPEYIKSFEEMANLATNIGNRITIHTPLIDMAKEQ 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
K ++G + + + +CY D C +C AC +R + K Q
Sbjct: 172 IIKTGLELG------VDYKNTISCYDPTEDDLS-----CGNCLACMIRLDAFK--KNNVQ 218
Query: 240 D 240
D
Sbjct: 219 D 219
>gi|120553049|ref|YP_957400.1| exsB protein [Marinobacter aquaeolei VT8]
gi|189038922|sp|A1TWU4|QUEC_MARAV RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|120322898|gb|ABM17213.1| preQ(0) biosynthesis protein QueC [Marinobacter aquaeolei VT8]
Length = 221
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 27/230 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S ++++SGG DS T L A R +V LSF+YGQR+ EL+ V +
Sbjct: 1 MTDSVVVIYSGGMDSFTLLHLARARGLKVHALSFNYGQRHVRELDVAADVCRA------- 53
Query: 67 WKDSLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
++ + + + +S SSLT ++ + +++ + T VP RN+I L A
Sbjct: 54 ---EGIPHKVIDIRAMSEVMSGSSLTSDIEVPEGHYEEDTMKATVVPNRNMILLSLATGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G + G D++ YPDCR + + ++ + V + P M + K +
Sbjct: 111 AVTTGAGAVWYGAHGGDHAIYPDCRPEFVEKMDAVCRVANYEPVGIEAPFMAMDKGQILA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G L ++ TCY G+ C C +C R + +
Sbjct: 171 EGLKLG------LDYSQTWTCYNGRDK-------ACGRCGSCVERLEAFA 207
>gi|318040804|ref|ZP_07972760.1| ExsB [Synechococcus sp. CB0101]
Length = 225
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 32/235 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + AL+ RV LSFDYGQR++ ELE + ++
Sbjct: 3 TAIALLSGGLDSATAAALALEDGQRVIGLSFDYGQRHRRELEAAARIAAQL--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L E H + + L S+LT + + +Q + +P+T+VPGRN +F+ +LA
Sbjct: 54 GLAEHHTISV-NLAAWGGSALTDSRMAVPSDGVQADVIPSTYVPGRNTVFIAIGLSLAEA 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLKKYET 180
G +V+GV DYSGYPDCR D + A + +L ++ H PL+ K +
Sbjct: 113 RGAERLVLGVNAVDYSGYPDCRPDYLDAFQRLADLASKAGREGHGSRLWAPLVTWSKTKI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ A +G + + ++ +CY G C C +C +R ++
Sbjct: 173 VQEALRLG------VPIADTWSCYSGGEQP-------CGVCDSCRIRDAALIDAG 214
>gi|222528233|ref|YP_002572115.1| exsB protein [Caldicellulosiruptor bescii DSM 6725]
gi|254764298|sp|B9MMB0|QUEC_ANATD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|222455080|gb|ACM59342.1| exsB protein [Caldicellulosiruptor bescii DSM 6725]
Length = 221
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 27/232 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++ SGG DS+T L + V +SF YGQ++ ELE KK L+
Sbjct: 2 RAVVVLSGGMDSTTLLYDVKSQGYEVFAISFLYGQKHSKELE----FAKKTCSLLSIPY- 56
Query: 70 SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ ++ +++ S+LT D+ + T VP RN++ L +A A
Sbjct: 57 -----KIVDISFFAELAPSALTTPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAIS 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG + G D+ YPDCR + + A++ A+ L + + P + +KK + +
Sbjct: 112 LGAKKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELEAPYVDMKKEDILRRGL 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + + +CY G + C C C R + + + K
Sbjct: 172 ELG------VNYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 210
>gi|57505254|ref|ZP_00371183.1| exsB protein [Campylobacter upsaliensis RM3195]
gi|57016390|gb|EAL53175.1| exsB protein [Campylobacter upsaliensis RM3195]
Length = 231
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 108/236 (45%), Gaps = 29/236 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
AL + SGG DS+ C A + L FDY QR + E EC + + +
Sbjct: 2 KKALCVISGGMDSTLCAYLAKKEGFEIIALHFDYNQRTERKEKECFHQICEHL------- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + ++L + L DI ++L + N LPNT+VP RN IFL AA+LA
Sbjct: 55 --GVLKHYVLNASFLKDIGGNALVDESLAVPKNALHQNALPNTYVPFRNGIFLSIAASLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKYETW 181
+ G + IGV E D SGYPDC + I+ E IN G + PL++L K E
Sbjct: 113 EKEGCEALYIGVVEEDSSGYPDCSENFIKKAENFINEGTSEGFKLSIKMPLVYLSKAEIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
LA N+ LE + +CY + C +C +C LR KG+ + K
Sbjct: 173 SLALK------ENVPLELTWSCYESEDK-------ACGACDSCLLRLKGFEKAGVK 215
>gi|218438301|ref|YP_002376630.1| exsB protein [Cyanothece sp. PCC 7424]
gi|254764329|sp|B7K7J4|QUEC_CYAP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|218171029|gb|ACK69762.1| exsB protein [Cyanothece sp. PCC 7424]
Length = 230
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 34/238 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
P A++L SGG DS+T + AL LS YGQR+ E+E +KIV+++
Sbjct: 3 QPKAVILLSGGLDSATTAAIALASGYEAIALSLFYGQRHHKEIEAA----QKIVQVL--- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATL 122
+ E + L + L S+LT ++++ +P T+VPGRN +F+ A +L
Sbjct: 56 --GIKEHYSLEV-NLSQWGGSALTDQ-SIEVPKAGLNPHLIPITYVPGRNTVFIAIALSL 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
A G I +G+ DYSGYPDCR + + A + NL + + + PL+ K
Sbjct: 112 AEAKGAQAIYLGINAIDYSGYPDCRPEYLEAFQKLANLSSKIGVEGKTIQLIAPLVKDSK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + A +G + + ++ +CY G+ + C C +C +R + +E
Sbjct: 172 VDIVRRAVRLG------VPIADTWSCYQGEDEP-------CGLCDSCRIRDRALIEAG 216
>gi|189029594|sp|Q0I671|QUEC_SYNS3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 226
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + A+ RV LSFDYGQR++ EL+ + + K +
Sbjct: 5 TAIALLSGGLDSATAAALAIKSGFRVIGLSFDYGQRHRRELDAAVEIAKAL--------- 55
Query: 70 SLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L E H + LA+ G S + + + ++ + +PNT+VPGRN +F+ +LA
Sbjct: 56 NLAEHHTINVDLAMWGGSSLTDHAQTLPTSGVETSIIPNTYVPGRNTVFIAIGLSLAEAR 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +V+GV DYSGYPDCR D + A + +L + H P +W E W Q
Sbjct: 116 GADRLVLGVNAVDYSGYPDCRPDYLEAFQDLADLSSRAGREGHGPKLWAPLVE-WSKQQI 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +E + +CY G C C +C +R + +
Sbjct: 175 AEEALHLGIPIERTWSCYSGGD-------VPCGVCDSCRIRDEALLAAG 216
>gi|320530194|ref|ZP_08031264.1| ExsB protein [Selenomonas artemidis F0399]
gi|320137627|gb|EFW29539.1| ExsB protein [Selenomonas artemidis F0399]
Length = 228
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS TC++ A + + +SF YGQR E++C +
Sbjct: 1 MREKAVILLSGGLDSCTCMAVAQEAGCELYPVSFVYGQRYDREVDCAKRIAAHFHA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAAT 121
+H++ + I S++T + ++ + + + +P T+VP RN+IFL +
Sbjct: 57 ------AEHLIIETNMDAIGGSAVT-DRSIDVPEGDPDRTDIPLTYVPARNLIFLSYGLG 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWL 175
A R+G ++ IGV DYSGYPDCR + IR + ++ + V TPL +L
Sbjct: 110 FAERVGAAHLYIGVNSVDYSGYPDCRPEFIRQFQAVADMATAAATERGKRIVVETPLQYL 169
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E L +G E + +CY G + C C +C LR +G+ E
Sbjct: 170 SKGEIIALGTRLGA------PYEMTTSCYNGGTE-------ACGVCDSCRLRLRGFAEAG 216
Query: 236 EK 237
+
Sbjct: 217 RR 218
>gi|284104500|ref|ZP_06386146.1| Exoenzyme S synthesis protein B/queuosine synthesis [Candidatus
Poribacteria sp. WGA-A3]
gi|283830200|gb|EFC34454.1| Exoenzyme S synthesis protein B/queuosine synthesis [Candidatus
Poribacteria sp. WGA-A3]
Length = 232
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L SGG DS+ + A + L+ YGQR+ E++ + +
Sbjct: 3 KAVALASGGLDSTVTAAMARHDGYALYLLTIRYGQRHHAEIQKAREIAAWLGA------- 55
Query: 70 SLGEDHILPLAILGDISHSS------LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
E IL L L + S+ + KN + + ++ +P+T+VP RN IFL A A
Sbjct: 56 --AEHKILQLD-LHEFGGSALVGAGDVPKNRSDRERETGIPSTYVPARNTIFLSLALAYA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKY 178
+ + I IG DYSGYPDCR + + A E LG + V + PL+ L K
Sbjct: 113 EVVDASCIFIGANVLDYSGYPDCRPEFLHAFERVARLGTKKGTDGQTVQIKAPLLLLSKT 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + + +G + E +H+CY + D G C C +C +R +G+ +
Sbjct: 173 QIIQQGRVLG------VPFELTHSCYDPRED-----GAACGRCDSCMIRLQGFRDAG 218
>gi|86160217|ref|YP_467002.1| ExsB protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|110816208|sp|Q2IG55|QUEC_ANADE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|85776728|gb|ABC83565.1| preQ(0) biosynthesis protein QueC [Anaeromyxobacter dehalogenans
2CP-C]
Length = 234
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 73/249 (29%), Positives = 101/249 (40%), Gaps = 34/249 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M +A A++L SGG DSSTCL+ A LS DYGQR+K EL
Sbjct: 1 MAKATSEARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGEL---------- 50
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNI 113
+ H + L S+LT + ++P T+VP RN
Sbjct: 51 ARARRIARALGAAGHRVVKVDLSAFGGSALTDAAIAVPKGRSEARMARDIPVTYVPARNT 110
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TV 168
+ L A A +G I +GV DYSGYPDCR + A E + + V +
Sbjct: 111 VMLSLALAHAEVIGAEQIFVGVNAIDYSGYPDCRPAFLHAFERLAKVATRAGVEGHPLRI 170
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
PL+ L K +L +G + + +CY R G C C AC LR+
Sbjct: 171 RAPLLRLSKAGIVRLGTKLG------VPYRMTLSCYDPIR------GRACGRCDACSLRR 218
Query: 229 KGWMEFKEK 237
KG+ E +
Sbjct: 219 KGFAEAGVQ 227
>gi|313894914|ref|ZP_07828474.1| protein ExsB [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976595|gb|EFR42050.1| protein ExsB [Selenomonas sp. oral taxon 137 str. F0430]
Length = 228
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 35/242 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS TC++ A + + +SF YGQR E++C +
Sbjct: 1 MREKAVILLSGGLDSCTCMAVAQEAGCELYPVSFVYGQRYDREVDCAKRIAAHFHA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAAT 121
+H++ + I S++T + ++ + + + +P T+VP RN+IFL +
Sbjct: 57 ------AEHLIIETNMDAIGGSAVT-DRSIDVPEGDPDRTDIPLTYVPARNLIFLSYGLG 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWL 175
A R+G ++ IGV DYSGYPDCR + IR + A ++ + V TPL +L
Sbjct: 110 FAERVGAAHLYIGVNSVDYSGYPDCRPEFIRQFQAAADMATAAATERGKRIVVETPLQYL 169
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E L +G E + +CY G + C C +C LR +G+ E
Sbjct: 170 SKGEIIALGTRLGA------PYELTTSCYNGGTE-------ACGVCDSCRLRLRGFAEAG 216
Query: 236 EK 237
+
Sbjct: 217 RR 218
>gi|302870892|ref|YP_003839528.1| exsB protein [Caldicellulosiruptor obsidiansis OB47]
gi|302573751|gb|ADL41542.1| exsB protein [Caldicellulosiruptor obsidiansis OB47]
Length = 217
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 27/228 (11%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
+ SGG DS+T L ++ V +SF YGQ++ ELE KK L+ L
Sbjct: 2 VLSGGMDSTTLLYDVKNQGYEVFAISFLYGQKHSKELE----FAKKTCSLL------LVP 51
Query: 74 DHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ ++ +++ S+LT D+ + T VP RN++ L +A A LG
Sbjct: 52 HKIVDISFFAELAPSALTMPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGAK 111
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G D+ YPDCR + + A++ A+ L + + P + +KK + K ++G
Sbjct: 112 KLFYGAHAGDHPIYPDCRKEFVEAMKKALYLADYIGLELEAPYVDMKKEDILKRGLELG- 170
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + +CY G + C C C R + + + K
Sbjct: 171 -----VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKAGVK 206
>gi|159904365|ref|YP_001551709.1| PP-loop superfamily ATPase [Prochlorococcus marinus str. MIT 9211]
gi|159889541|gb|ABX09755.1| Predicted PP-loop superfamily ATPase [Prochlorococcus marinus str.
MIT 9211]
Length = 229
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 26/238 (10%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
P ++ L SGG DS+T + AL+ V +SFDYGQR+K ELE + + + L
Sbjct: 4 NNKPISIALLSGGLDSATATAMALEAGHNVIGISFDYGQRHKRELEAAIELAAHLNLLGH 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ + + LA G S + L ++V + I +PNT+VPGRN +F+ +LA
Sbjct: 64 EIIN-------VNLAKWGGSSLTDLQQSVPTQGIIKGKIPNTYVPGRNTVFIAIGLSLAE 116
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
G IV+G+ DYSGYPDCR D +++ + NL ++ + PL+ L K E
Sbjct: 117 AKGANQIVLGINAMDYSGYPDCRPDYLKSFQALANLASKAGREGNAPKLWAPLIHLNKVE 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ A + N+ ++++ +CY G C C +C +R + +
Sbjct: 177 IIQEALRL------NIPIDKTWSCYNGLEKP-------CGLCDSCRIRNEALEKAGRS 221
>gi|119944857|ref|YP_942537.1| exsB protein [Psychromonas ingrahamii 37]
gi|189038943|sp|A1STX3|QUEC_PSYIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119863461|gb|ABM02938.1| exsB protein [Psychromonas ingrahamii 37]
Length = 221
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 28/231 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++++SGG DS T L A+ + L+FDYGQR+ E+E V +++
Sbjct: 1 MSKKVVVIYSGGMDSFTVLHKAMQQGLTPYALTFDYGQRHIKEIEVAREVCEELG----- 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAAT 121
++ ++ + + S + ++ Q ++ +T VP RN+I L A
Sbjct: 56 -----VHHKVIDISAINQLIGGSSLTDSSIDVAQGHYQQESMKSTVVPNRNMILLSLAIG 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A LG + G D+ YPDCR + + + V + +P + K
Sbjct: 111 YAVSLGAEQVYYGAHSGDHEIYPDCRPIFVEKMNDVAAVANYEKVEIFSPYLNNNKSGIL 170
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K +G L ++ TCY G+ C C +C R + +
Sbjct: 171 KDGLAMG------LDYSKTWTCYNGREK-------ACGKCGSCVERLEAFA 208
>gi|313673177|ref|YP_004051288.1| exsb protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939933|gb|ADR19125.1| exsB protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 221
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 28/233 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
++L SGG DS + A + + L +YGQ+ + ELE K+ +
Sbjct: 2 KKGIVLVSGGLDSCVTAAIAKNMGYSLYFLHINYGQKTEKKELESF----NKLADFFKVV 57
Query: 68 KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
I+ ++ L I SSLT ++ ++ D ++PNT+VP RN L A + A
Sbjct: 58 GKL-----IVDISYLKVIGGSSLTVDSIEIERGDPFRKDIPNTYVPFRNGNILSIAVSWA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWK 182
+ I IGV E D SGYPDCR A + +G+ + + + TPL+ K E +
Sbjct: 113 EVIRADRIFIGVVEEDSSGYPDCRKQFYDAFNQILKVGLAYTDLLIETPLIDKTKGEIVR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G E + +CY E C C +C LR KG+ E
Sbjct: 173 IGAKLGA------PFELTWSCY-------GENEVACGVCDSCLLRLKGFKEAG 212
>gi|297570306|ref|YP_003691650.1| exsB protein [Desulfurivibrio alkaliphilus AHT2]
gi|296926221|gb|ADH87031.1| exsB protein [Desulfurivibrio alkaliphilus AHT2]
Length = 258
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 79/244 (32%), Positives = 109/244 (44%), Gaps = 27/244 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI------ 60
K A++L SGG DS+T L+ A R LSF YGQR+ ELE +
Sbjct: 14 KGQPAVVLLSGGLDSTTVLALAKAAGYRCHCLSFRYGQRHTQELELARANARHWGAARHL 73
Query: 61 ---VELMPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+EL +L D + +P L + S +P T+VPGRN IFL
Sbjct: 74 ILNIELDAIGGSALTGDELEVPKDNLSPL-DSPDGAETDAPGMAGEVPVTYVPGRNTIFL 132
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTP 171
+AA+ A LG +I IGV D+SGYPDCR D + A+ A+NLG + P
Sbjct: 133 AYAASWAEVLGARDIFIGVNAVDFSGYPDCRPDYLEALAAALNLGSQCGREGRPFRLQAP 192
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ L K E +G + +H+CY + R C C AC LR++G+
Sbjct: 193 LLHLSKAEIIAKGLALG------VDYARTHSCYDPDQQHR-----ACGRCDACILRRRGF 241
Query: 232 MEFK 235
Sbjct: 242 AAAG 245
>gi|262375548|ref|ZP_06068781.1| queuosine biosynthesis protein queC [Acinetobacter lwoffii SH145]
gi|262309802|gb|EEY90932.1| queuosine biosynthesis protein queC [Acinetobacter lwoffii SH145]
Length = 222
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 115/237 (48%), Gaps = 32/237 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P A++L SGG DS+TCL+WA R+ LSF YGQR+ EL+ + ++
Sbjct: 1 MRPRAIVLLSGGLDSTTCLAWAQARY-ECIALSFRYGQRSTTELDAARALTQR------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLA 123
G +H + LG++ S+LT + ++++ D+ +P T+VP RN IFL +A A
Sbjct: 53 ----AGVEHRVINIDLGNLGGSALTDH-SIEVPDHEQAGIPITYVPARNTIFLSYALAAA 107
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKY 178
IVIG+ DYSGYPDCR + I A L + V TPL+ L K
Sbjct: 108 EVFEAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKVGVEGQALKFETPLLHLSKA 167
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+L + G + ++ +CY + G C C +C LR++G+ +
Sbjct: 168 NIIRLGIEHG------VDYSQTVSCYQAD-----DQGRACGKCDSCRLRKQGFADAG 213
>gi|56460022|ref|YP_155303.1| PP-loop superfamily ATPase [Idiomarina loihiensis L2TR]
gi|81362360|sp|Q5QUZ6|QUEC_IDILO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56179032|gb|AAV81754.1| Predicted PP-loop superfamily ATPase [Idiomarina loihiensis L2TR]
Length = 218
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 27/230 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++++SGG DS T L AL + V LSF+YGQR+ ELE V K+
Sbjct: 1 MSQKVVVIYSGGMDSFTVLHRALAEGNEVLALSFNYGQRHVKELEVAGNVCKQ------- 53
Query: 67 WKDSLGEDHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
++ + + + S SSLT ++ + ++ ++ +T VP RN+I L A
Sbjct: 54 ---HGIPHKVVDITAINSLLSGSSLTDDIDIPEGHYEEESMKSTVVPNRNMILLSLAIGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + + G D++ YPDCR + +R ++ + V VH P + + K
Sbjct: 111 AVSEEASAVYYGAHSGDHAIYPDCRPEFVRQMDVVSKMANYEPVAVHAPYLDVDKNAILA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G L ++ TCY G+ C C AC R + +
Sbjct: 171 DGIKMG------LDYSQTWTCYNGRDK-------ACGKCGACQERLEAFA 207
>gi|320335722|ref|YP_004172433.1| exsB protein [Deinococcus maricopensis DSM 21211]
gi|319757011|gb|ADV68768.1| exsB protein [Deinococcus maricopensis DSM 21211]
Length = 230
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 33/235 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L+ A V LSF YGQR+ VELE +
Sbjct: 3 KAVVLLSGGLDSSTTLAIAQQDGYAVTALSFRYGQRHTVELERAAHIAAHF--------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN-VAMKI---QDNNLPNTFVPGRNIIFLVFAATLAYR 125
G DH + +G S+LT + + + + D +P T+VPGRN +F+ A +LA
Sbjct: 54 --GADHRVIDINIGSFGGSALTDDRIDVPVDATPDGVIPPTYVPGRNTVFIAVALSLAEA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
+ + +G+ DYSGYPDCR + + A + +L ++ + + PL+ L K +
Sbjct: 112 IEAERLYLGITAVDYSGYPDCRPEYLDAYQRLADLATKAGLEGRGAKLVAPLLTLTKLDI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ A D+G + + + +CY G C C +C +R + ++
Sbjct: 172 VRAALDLG------VPVNVTWSCYQGGTQP-------CGVCDSCRIRDRALIDAG 213
>gi|332140738|ref|YP_004426476.1| putative regulator protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|254764297|sp|B4RTX3|QUEC_ALTMD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|327550760|gb|AEA97478.1| putative regulator protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 218
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ + ++++SGG DS T L AL +V LSFDYGQR+K EL+ V +
Sbjct: 1 MSENVVVIYSGGMDSFTVLHKALRAGKKVHALSFDYGQRHKKELDYAAAVCTSLG----- 55
Query: 67 WKDSLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ ++ + I S+LT ++ + ++ ++ T VP RN+I L A
Sbjct: 56 -----VPHKIVDISAINTLIGGSALTSDIDVPEGHYEEPSMKQTVVPNRNMILLSLAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + G D++ YPDCR + + + + + VT+ TP + K
Sbjct: 111 AVSLDANEVYYGAHSGDHAIYPDCRPEFVHKMNDVCGIANYTPVTIMTPYIKDSKTAILT 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G L ++ TCY G+ C C AC R + + +
Sbjct: 171 DGLSMG------LDYGQTWTCYNGREK-------ACGKCGACEERLEAFKD 208
>gi|91205311|ref|YP_537666.1| trans-regulatory protein ExsB [Rickettsia bellii RML369-C]
gi|157826917|ref|YP_001495981.1| trans-regulatory protein ExsB [Rickettsia bellii OSU 85-389]
gi|110816256|sp|Q1RJ87|QUEC_RICBR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016448|sp|A8GVR7|QUEC_RICB8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91068855|gb|ABE04577.1| Trans-regulatory protein ExsB [Rickettsia bellii RML369-C]
gi|157802221|gb|ABV78944.1| Trans-regulatory protein ExsB [Rickettsia bellii OSU 85-389]
Length = 225
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 31/240 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ ++ + +SF+YGQRN EL +K+ EL+ ++
Sbjct: 2 KKAVILVSGGADSATVLAIMREQGYEIHAISFNYGQRNNAEL-------RKVTELVKEYN 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ H + L S+LT + K ++P T+VP RN IFL +A
Sbjct: 55 ---VKQHKIVNIDLRAFGGSALTDDDIKVPHYHDTKELPEDVPVTYVPARNTIFLSYALG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWLKKYET 180
A +G +I IGV +D + YPDCR + I++ E NL VT+HTPL+ + K +
Sbjct: 112 FAEIIGAKDIFIGVHTSDSANYPDCRPEYIKSFEAMANLATNIGGVTIHTPLINMTKDQI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
K +G + + + +CY D C +C AC +R + K QD
Sbjct: 172 IKTGLRLG------VDYKNTISCYDPSEDDLS-----CGTCLACTIRLDAFK--KNNVQD 218
>gi|167628631|ref|YP_001679130.1| exsb protein, putative [Heliobacterium modesticaldum Ice1]
gi|167591371|gb|ABZ83119.1| exsb protein, putative [Heliobacterium modesticaldum Ice1]
Length = 247
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 31/243 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR------KKIV 61
A+++ SGG DS+TC++ A R + + L+F Y QR+ E+E V +I+
Sbjct: 5 RERAVVILSGGLDSTTCMALADCRGEDIFALTFAYNQRHIREIEAAQAVACHYGAHHQII 64
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-------LPNTFVPGRNII 114
+L + S + + + S++ K AM + N +P T+VP RNI+
Sbjct: 65 DLGAVFAASALTSTEIRPEVAAPLGGSAVAKMEAMGCAEKNPVAIATAIPATYVPARNIL 124
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVH 169
FL +A + A ++G I GV D GYPDCR + I A + I++G ++ V V
Sbjct: 125 FLAYALSFAEKVGARRIYTGVNALDNPGYPDCRPEFIAAFQRMIDVGTKAGTEGRSVEVF 184
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
TPL+ + K + +LA D+ + L + TCY G+R C C +C LR +
Sbjct: 185 TPLIEMNKADIIRLALDL------DAPLHLTLTCYYGERP-------ACGECNSCRLRLE 231
Query: 230 GWM 232
G+
Sbjct: 232 GFR 234
>gi|291279332|ref|YP_003496167.1| ExsB family transcriptional regulator [Deferribacter desulfuricans
SSM1]
gi|290754034|dbj|BAI80411.1| transcriptional regulator, ExsB family [Deferribacter desulfuricans
SSM1]
Length = 237
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 31/236 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
A++L SGG DS + A D + L +YGQR + EL+ +
Sbjct: 2 RKAIVLVSGGMDSCVTAAIAKDMGYELYLLHTNYGQRTENRELKAFYDIA---------S 52
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATL 122
+ ++ + L I S+LT ++++ N +P T+VP RN L A +
Sbjct: 53 YYDAKDTLVVSIDYLKKIGGSALTDE-KIEVEKGNLNRKEIPKTYVPFRNANILSIATSW 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
A + I IG E D SGYPDCR +++ + + V TPL+ +KK +
Sbjct: 112 AEVIEAERIFIGAVEEDSSGYPDCRKIFYDKFNDLLSVALAKDIGLKVETPLINMKKKDI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K ++ N L S +CY + C C +C LR KG+ME E
Sbjct: 172 VKKGVEL------NAPLHLSWSCYKSEDK-------ACGECDSCLLRLKGFMEAGE 214
>gi|126657829|ref|ZP_01728982.1| ExsB [Cyanothece sp. CCY0110]
gi|126620769|gb|EAZ91485.1| ExsB [Cyanothece sp. CCY0110]
Length = 231
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 30/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ P A++L SGG DS+T + A+D+ V LS YGQR++ EL + + +
Sbjct: 1 MIHKPLAVVLLSGGLDSATSAAIAIDQGYEVIALSLRYGQRHQRELNAAQTIAQAL---- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAAT 121
++ + +I+ + I S ++++ + +P+T+VPGRN +F+ A +
Sbjct: 57 -----NISKHYIIDVNIAQWGGSSLTDSSLSLPQSGVDTTVIPSTYVPGRNTVFIALALS 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-----K 176
LA G I +G+ DYSGYPDCR D ++A +T NL ++ + PL+
Sbjct: 112 LAEAKGAQAIYLGINAVDYSGYPDCRPDYLQAYQTLANLSSKAGLEGKAPLLTAPLITKT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K A +G + + ++ +CY GK + C C +C +R + +E
Sbjct: 172 KVDIIKDAIKLG------VPIAKTWSCYQGKPEP-------CGLCDSCRIRDRALIEAG 217
>gi|90408081|ref|ZP_01216252.1| Predicted PP-loop superfamily ATPase [Psychromonas sp. CNPT3]
gi|90310838|gb|EAS38952.1| Predicted PP-loop superfamily ATPase [Psychromonas sp. CNPT3]
Length = 230
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K ++++SGG DS T L AL+ L+FDYGQR+ E+ V +
Sbjct: 9 KMKKKVVVIYSGGMDSYTVLHKALEEGLVPFALTFDYGQRHIKEISVARDVCLSLN---- 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAA 120
+ I+ ++ + ++ S + ++++ ++NN+ NT VP RN+I L A
Sbjct: 65 ------VDHKIIDISSINELIGGSSLTDSSIEVSSGEYENNNMINTVVPNRNMILLSMAI 118
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A +G + G D+ YPDCR + + + V++++P + K
Sbjct: 119 GYAVSIGAEKVYYGAHSGDHEIYPDCRPIFVEKMNAVAEVANYEKVSIYSPYLNSDKIGI 178
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K +G L ++ TCY G+ C C +C R + +
Sbjct: 179 LKDGLRMG------LDYSKTWTCYNGREKS-------CGVCASCIERLEAF 216
>gi|320108725|ref|YP_004184315.1| exsB protein [Terriglobus saanensis SP1PR4]
gi|319927246|gb|ADV84321.1| exsB protein [Terriglobus saanensis SP1PR4]
Length = 236
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 102/240 (42%), Gaps = 33/240 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
A++ SGG DS+ C + A FD V L F YGQR + EL V + I
Sbjct: 14 RERAVICLSGGMDSTVCATLASRDFD-VYALHFSYGQRTEARELASARAVAEYIGA---- 68
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNV--------AMKIQDNNLPNTFVPGRNIIFLVF 118
E L + + I S+LT + +P T+VP RN FL
Sbjct: 69 -----KEFLPLRMDLFRQIGGSALTDTSIAVPNAPEDEATIGHEVPVTYVPFRNAHFLSA 123
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKK 177
A + A LG + IG E D SGYPDCR A I G E ++ V TPL+ LKK
Sbjct: 124 AVSWAEVLGAPTVSIGAVEQDSSGYPDCRPAYYDAFNALIQQGTKEGNIRVITPLIHLKK 183
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
E +L ++ + L S +CY G+ C C +C LR + + E EK
Sbjct: 184 AEIVRLGVEL------HAPLHVSWSCYSGEEK-------ACGVCESCSLRLRAFKEAGEK 230
>gi|326795519|ref|YP_004313339.1| exsB protein [Marinomonas mediterranea MMB-1]
gi|326546283|gb|ADZ91503.1| exsB protein [Marinomonas mediterranea MMB-1]
Length = 219
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 27/231 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++++SGG DS T L+ A+ V LSF+YGQR+ EL V + +
Sbjct: 1 MTNKAVVVYSGGMDSFTVLNKAIKDGKDVYALSFNYGQRHSKELIVAAKVCQDLN----- 55
Query: 67 WKDSLGEDHILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
++ ++ + ++ + SSLT + + + ++ +T VP RN++ L A
Sbjct: 56 -----IPHKVVNISAINELMAGSSLTDEIEIPEGHYAEESMKSTVVPNRNMVLLSMAIAY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A L + G D+ YPDCR + A+ + V + TP + K + +
Sbjct: 111 AVSLEAPEVYYGAHSGDHHIYPDCRPAFVNAMNDVSKIANYQSVEIVTPYLSNSKGDILE 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G L + TCY G+ C C AC R + + E
Sbjct: 171 DGLTMG------LNYANTWTCYNGREK-------ACGKCGACTERLEAFSE 208
>gi|114776302|ref|ZP_01451347.1| exsB protein [Mariprofundus ferrooxydans PV-1]
gi|114553132|gb|EAU55530.1| exsB protein [Mariprofundus ferrooxydans PV-1]
Length = 230
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L+WA+ + + T++FDYGQR+++EL+ +
Sbjct: 8 AVVLLSGGLDSSTALAWAVRKMGWQCHTVAFDYGQRHRIELDASAAIAHSFG-------- 59
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLAYRL 126
DH + L I HS+LT + + +P+T+VP RN+IFL AA LA +
Sbjct: 60 --VTDHRVISVDLRAIGHSALTSATPVPKDEAGHAGIPSTYVPARNLIFLSLAAGLAEAV 117
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
T +VIG DYSGYPDCR + + A LG + + + PL+ L K E
Sbjct: 118 CATRLVIGANVVDYSGYPDCRQEFLDAFVRTALLGTKAGSEGGDLQIAAPLIQLGKAEII 177
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+L D+G L + +CY G C C +CY R++G+ + +
Sbjct: 178 ELGLDLG------LDYGLTRSCYD-----PLPGGSPCGHCDSCYYRRQGFEQLGRQ 222
>gi|119357731|ref|YP_912375.1| exsB protein [Chlorobium phaeobacteroides DSM 266]
gi|167016422|sp|A1BHS4|QUEC_CHLPD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119355080|gb|ABL65951.1| exsB protein [Chlorobium phaeobacteroides DSM 266]
Length = 226
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 98/235 (41%), Gaps = 29/235 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A++L SGG DS + A + + + +YGQR ELE +
Sbjct: 2 KAVVLLSGGMDSLVTTAIANAQGFELAAMHVNYGQRTWHKELEAFRLIADHYA------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+GE + L I SSLT +Q ++P ++VP RN FL A + A
Sbjct: 55 --IGERLEINADYLAQIGGSSLTDYSMPISGADLQGLSIPTSYVPFRNAGFLSMAVSWAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
+G I IG E D SGYPDCR A I LG E+ + + TPL+ ++K E +
Sbjct: 113 VIGAERIFIGAVEEDSSGYPDCRKVFYDAFNAVIALGTKPETSIAIMTPLIEMQKSEIVR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++ E S +CY + G C C +C LR + + +
Sbjct: 173 KGMELTA------PFELSWSCYKSE-------GKACGVCDSCALRLRAFERAGMR 214
>gi|328950181|ref|YP_004367516.1| exsB protein [Marinithermus hydrothermalis DSM 14884]
gi|328450505|gb|AEB11406.1| exsB protein [Marinithermus hydrothermalis DSM 14884]
Length = 233
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 34/239 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P A+ L SGG DS+T + AL V LSF YGQR+ EL V K +
Sbjct: 1 MKPKAVALLSGGLDSATAAAQALADGYEVIALSFAYGQRHTRELTAAKEVAKAL------ 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAAT 121
+ E ++L + L S+LT + +++ +P T+VPGRN +FL A +
Sbjct: 55 ---GIQEHYVLEV-NLAQWGGSALT-DPTIQVPTGGVNPEVIPPTYVPGRNTVFLAIALS 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLK 176
LA G I +G+ DYSGYPDCR + + A + NL ++ + + PL+
Sbjct: 110 LAEARGAEAIYLGINAVDYSGYPDCRPEYLEAFQRLANLATKAGLEGQAPRLVAPLVMDT 169
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + A +G + +E + +CY G + C C +C +R + +E
Sbjct: 170 KADIVRRALALG------VPIERTWSCYQGGEEP-------CGLCDSCRIRDRALIEAG 215
>gi|85711960|ref|ZP_01043014.1| Predicted PP-loop superfamily ATPase [Idiomarina baltica OS145]
gi|85694146|gb|EAQ32090.1| Predicted PP-loop superfamily ATPase [Idiomarina baltica OS145]
Length = 219
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++++SGG DS T L+ AL++ V LSF+YGQR+ EL+ V + +
Sbjct: 1 MSQKVVVIYSGGMDSFTVLNRALEQGHEVSALSFNYGQRHVRELDVAAKVCEALN----- 55
Query: 67 WKDSLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATL 122
I+ + + ++ SSLT ++ + +++++ +T VP RN+I L A
Sbjct: 56 -----IPHKIVDITAINTLLAGSSLTDDIEIPEGHYEESSMKSTVVPNRNMILLSLAIGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G + + G D++ YPDCR + +R + L V V P + + K
Sbjct: 111 AVSEGASAVYYGAHSGDHAIYPDCRPEFVRQMNVVSQLANYEPVEVVAPYLDVDKNAI-- 168
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ ++L ++ TCY G+ C C AC R + +
Sbjct: 169 ----LADGLRMDLNYADTWTCYNGRDK-------ACGKCGACVERLEAFA 207
>gi|255322577|ref|ZP_05363722.1| ExsB protein [Campylobacter showae RM3277]
gi|255300485|gb|EET79757.1| ExsB protein [Campylobacter showae RM3277]
Length = 223
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
A+ + SGG DS+ C A + L FDYGQR K E + ++I L
Sbjct: 2 KKAVCIMSGGMDSTLCAVLAKRAGYEIIALHFDYGQRTMKREKLAFEQISERIGALKKVN 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAY 124
L + + I ++LT +D + P T+VP RN IF+ AA LA
Sbjct: 62 ---------LDASFIASIGGNALTDESLAIRKDGAKPDTPTTYVPFRNGIFISIAAALAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
+ G + IG+ E D SGYPDC D I IE+A+N G + TPL+ L K + +
Sbjct: 113 KEGAQALYIGIVEEDGSGYPDCTADFIGKIESAVNAGTSKDFSLRIVTPLVNLSKADIVR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + G LE + +CY + + C C +C LR +G+ EK
Sbjct: 173 KSIEAGS------PLELTWSCYEREDE-------ACGECDSCRLRLRGFELAGEK 214
>gi|238926261|ref|ZP_04658021.1| trans-regulatory protein ExsB [Selenomonas flueggei ATCC 43531]
gi|238885941|gb|EEQ49579.1| trans-regulatory protein ExsB [Selenomonas flueggei ATCC 43531]
Length = 228
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 68/240 (28%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS TC++ A + +SF+Y QR+ EL+ +
Sbjct: 1 MGERAVILLSGGLDSCTCMAIAHAAGQELYPISFNYHQRHSRELDAARSIAAHYHA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAAT 121
+H++ + I S+LT + A+ + N +P T+VP RN+IFL +A
Sbjct: 57 ------AEHLIIETNMDAIGGSALT-DSAIDVPQGNAERTDIPVTYVPARNLIFLSYALG 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWL 175
A R+G ++ IGV DYSGYPDCR + I A + A + + + TPL L
Sbjct: 110 YAERVGAAHVYIGVNSVDYSGYPDCRPEFIAAFQRAADAATAASAEDGRRIVIETPLQHL 169
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E ++ + + +CY G C C +C LR +G+ E
Sbjct: 170 SKGEIILRGDEL------DAPYALTTSCYRGGT-------VACGVCDSCLLRLRGFAEAG 216
>gi|312134199|ref|YP_004001537.1| exsb protein [Caldicellulosiruptor owensensis OL]
gi|311774250|gb|ADQ03737.1| exsB protein [Caldicellulosiruptor owensensis OL]
Length = 217
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 27/228 (11%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
+ SGG DS+T L ++ V +SF YGQ++ ELE KK L+
Sbjct: 2 ILSGGMDSTTLLYDVKNQGYEVFAISFLYGQKHSKELE----FAKKTCSLLSIP------ 51
Query: 74 DHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ ++ +++ S+LT D+ + T VP RN++ L +A A LG
Sbjct: 52 HRIVDISFFAELAPSALTMPDWDVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGAK 111
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G D+ YPDCR + + A++ A+ L + + P + +KK + + ++G
Sbjct: 112 KLFYGAHAGDHPIYPDCRKEFVEAMKKALYLADYIGLELEAPYVDMKKEDILRRGLELG- 170
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + +CY G + C C C R + + + K
Sbjct: 171 -----VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 206
>gi|33866961|ref|NP_898520.1| ATPase [Synechococcus sp. WH 8102]
gi|81573666|sp|Q7U3K1|QUEC_SYNPX RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33639562|emb|CAE08946.1| possible ATPase [Synechococcus sp. WH 8102]
Length = 226
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 107/232 (46%), Gaps = 22/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+++ L SGG DS+T + AL+ DRV LSFDYGQR+ ELE V +
Sbjct: 3 QRTSVALLSGGLDSATAAAMALEEGDRVIGLSFDYGQRHHRELEAAAAVASHL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
L E H L + L S+LT + +Q+ +P T+VPGRN +F+ +LA
Sbjct: 56 --GLAEHHCLAVD-LAAWGGSALTDDAVTIPTDGVQEGVIPPTYVPGRNTVFIAVGLSLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G +V+GV DYSGYPDCR D + + NL ++ H +W E W
Sbjct: 113 EARGAERLVLGVNAVDYSGYPDCRPDYLNVFQQLANLASKAGREGHGTELWAPLVE-WSK 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +N+ ++ + +CY G C C +C +R E
Sbjct: 172 TRIVEEAFRLNVPIQSTWSCYSGGTTP-------CGICDSCRIRDAALREAG 216
>gi|304437053|ref|ZP_07397016.1| transcription regulator ExsB [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370004|gb|EFM23666.1| transcription regulator ExsB [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 228
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 33/239 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS TC++ A + +SF+Y QR+ EL+ +
Sbjct: 1 MGERAVILLSGGLDSCTCMAIAHAAGQELYPISFNYHQRHSRELDAAKSIAAHYHA---- 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+H++ + I S+LT + + ++P T+VP RN+IFL +A
Sbjct: 57 ------AEHLIIETNMDAIGGSALTDSAIDVPQGDAERTDIPVTYVPARNLIFLSYAVGY 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWLK 176
A R+G ++ IGV DYSGYPDCR I A + A + + + TPL L
Sbjct: 111 AERVGAAHVYIGVNSVDYSGYPDCRPAFIAAFQRAADAATAASAENGRRIVIETPLQHLS 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E + + + + +CY G C C +C LR +G+ E
Sbjct: 171 KGEIIRRGDAL------DAPYALTTSCYQGGS-------VACGVCDSCLLRLRGFAEAG 216
>gi|237737357|ref|ZP_04567838.1| succinoglycan biosynthesis regulator [Fusobacterium mortiferum ATCC
9817]
gi|229421219|gb|EEO36266.1| succinoglycan biosynthesis regulator [Fusobacterium mortiferum ATCC
9817]
Length = 232
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 69/232 (29%), Positives = 102/232 (43%), Gaps = 26/232 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+L SGG DSSTCL+ A+DR+ D V LS YGQ++ ELE +KI
Sbjct: 2 RVLVLLSGGVDSSTCLAMAVDRYGKDNVVALSASYGQKHTKELESA----RKIASYYQIE 57
Query: 68 KDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ I + +SHS + + ++ D +T+VP RN +FL AA++
Sbjct: 58 LIEINLGKIFSFSNCSLLSHSDKEIPQGSYDEQLRNIDGEKLSTYVPFRNGLFLSTAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A I G D +G YPDC + A+ AI LG + + P + + K +
Sbjct: 118 ALSKNCQVIYYGAHSDDSAGDAYPDCSPEFNEAMNRAIYLGSGKELKIEAPFVNMHKSDI 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K ++ NL E + +CY G Y C C C R+K +
Sbjct: 178 VKKGLEL------NLPYELTWSCYEGGE-------YPCGKCGTCIDREKAFE 216
>gi|225873461|ref|YP_002754920.1| exsB protein [Acidobacterium capsulatum ATCC 51196]
gi|254764291|sp|C1F844|QUEC_ACIC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|225791467|gb|ACO31557.1| exsB protein [Acidobacterium capsulatum ATCC 51196]
Length = 229
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 108/241 (44%), Gaps = 33/241 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVE 62
+ K A++ SGG DS C + A R + F YGQR + EL V +++
Sbjct: 1 MTPKRERAVVCLSGGMDSCVCAAIA-ARDYEPYAIHFSYGQRTEARELVSARSVAERLG- 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDN-----NLPNTFVPGRNII 114
+KD L L + + I S+LT +V + +P T+VP RN
Sbjct: 59 ----FKDLLH----LKIDLFRRIGGSALTDTSIDVPKAPAEEAAIGAEIPVTYVPFRNAH 110
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLM 173
FL A + A LG + IVIG E D SGYPDCR A + I G E + V TPL+
Sbjct: 111 FLAAAVSWAEVLGASKIVIGAVEQDSSGYPDCRPAYYEAFQHLIETGTKEGSIRVETPLI 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L+K E +L ++G L+ + +CY G + C C +C LR + + E
Sbjct: 171 QLRKREIVRLGLELGA------PLDLTWSCYSGAEE-------ACGECESCVLRLRAFEE 217
Query: 234 F 234
Sbjct: 218 A 218
>gi|292655863|ref|YP_003535760.1| exsB protein [Haloferax volcanii DS2]
gi|291372353|gb|ADE04580.1| exsB protein [Haloferax volcanii DS2]
Length = 244
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 27/242 (11%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ A++L SGG DS+T A R + L YGQ+ E + C R+
Sbjct: 3 TEPTSDDKRAVVLLSGGMDSATTAYEATRRGYELYALHTSYGQKT--ESKEYDCARELAD 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLV 117
EL + + H L I SSLT + + +++P ++VP RN L
Sbjct: 61 ELDARDFLHIETSH------LKQIGASSLTDDSMAVADADVDADDIPTSYVPFRNANLLS 114
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWL 175
A + A + +G DYSGYPDCR + A E +++G ++ +++ P +
Sbjct: 115 MAVSYAEANDCDAVFVGAHSEDYSGYPDCRPEFFDAFEAMVDVGTKPDTTISLEVPFVHD 174
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + ++G + E + +CY + C +C +C R + +
Sbjct: 175 SKTDIARRGLELG------VPFEHTWSCYRAEEP-------ACGTCDSCAFRLQAFQNLG 221
Query: 236 EK 237
E+
Sbjct: 222 ER 223
>gi|157826116|ref|YP_001493836.1| trans-regulatory protein ExsB [Rickettsia akari str. Hartford]
gi|167016447|sp|A8GPK3|QUEC_RICAH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157800074|gb|ABV75328.1| Trans-regulatory protein ExsB [Rickettsia akari str. Hartford]
Length = 227
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 35/244 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A + + ++SF+YGQRN EL +K+ EL+ ++
Sbjct: 2 KKAVMLVSGGADSATVLAMAREIGYEIHSMSFNYGQRNNAEL-------RKVKELIKEY- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + I+ + L S+LT + + ++P T+VP RN IFL +A
Sbjct: 54 -NVKQHKIVDID-LRAFGGSALTDDNIDVPHYHDVNAVPEDVPVTYVPSRNTIFLSYALG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLK 176
A +G +I IGV +D + YPDCR + I++ E NL +T+HTPL+ +
Sbjct: 112 YAEVIGAKDIFIGVHTSDSANYPDCRPEYIKSFEKMANLATSIGIQGQKITIHTPLIDMT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K + + +G + + + +CY D C +C AC +R + K
Sbjct: 172 KEQIIRTGLKLG------VDYKNTISCYEPTEDDSS-----CGNCLACMIRLDAFK--KN 218
Query: 237 KYQD 240
QD
Sbjct: 219 NIQD 222
>gi|289582000|ref|YP_003480466.1| exsB protein [Natrialba magadii ATCC 43099]
gi|289531553|gb|ADD05904.1| exsB protein [Natrialba magadii ATCC 43099]
Length = 251
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 29/243 (11%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKI 60
D A++L SGG DS+T + A + + L YGQR + ELEC + +
Sbjct: 16 TDATDTNNRAVVLLSGGMDSATAAAEARSQGYDIYALHTSYGQRTETRELECARQLADEF 75
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFL 116
+ + L I SSLT + + + +P+++VP RN L
Sbjct: 76 ---------EANDFLQIETGHLSAIGASSLTDDEMAVADADMDSDEIPSSYVPFRNANLL 126
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMW 174
A + A + IG D+SGYPDCR + A E ++G E+ +++ P +
Sbjct: 127 AMAVSYAEANDCEAVFIGAHSEDFSGYPDCRPEFFEAFERVADVGTKPETEISIEAPFVE 186
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K + ++G + E + +CY + C +C AC R + +
Sbjct: 187 WSKTDIAAHGTELG------VPYEHTWSCYRDDQP-------ACGTCDACAYRLQAFQRI 233
Query: 235 KEK 237
+
Sbjct: 234 GVR 236
>gi|103486841|ref|YP_616402.1| ExsB [Sphingopyxis alaskensis RB2256]
gi|98976918|gb|ABF53069.1| ExsB [Sphingopyxis alaskensis RB2256]
Length = 227
Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats.
Identities = 70/239 (29%), Positives = 103/239 (43%), Gaps = 28/239 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I + ++L SGG DS C A + R+ L+ DY QR++VELE + +
Sbjct: 2 QIMSGKTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHVGA- 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAAT 121
+HI+ L S+LT ++ + ++P T+VP RN+IFL
Sbjct: 61 ---------AEHIVLPLDLRRFGGSALTADIDVPKDGVGTDIPVTYVPARNLIFLSLTLG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLK 176
LA +IVIGV DYSGYPDCR I+ E L +H PL +
Sbjct: 112 LAEARQAADIVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVRFHIHAPLQHMT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + A +G + S +CY G C +C +C LR+KG+ +
Sbjct: 172 KADIAAEAARLGMDAAM------SWSCYD-----PTPEGLHCGACDSCRLRRKGFADAG 219
>gi|288931808|ref|YP_003435868.1| exsB protein [Ferroglobus placidus DSM 10642]
gi|288894056|gb|ADC65593.1| exsB protein [Ferroglobus placidus DSM 10642]
Length = 243
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 24/227 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DSST L + L + V L+F YGQR+ E+E K+IVE K
Sbjct: 2 RGVLILSGGIDSSTLLYYLLKKGYEVHALTFYYGQRHSKEIEY----SKRIVEEAKKVGK 57
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
E ++ ++ + + I+ +LT + + + T VP RN+I L AA A +
Sbjct: 58 --VEHKVVDISSIHELIAKGALTSDEDVPKAFYTEEVQRRTIVPNRNMILLSIAAGYAVK 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWKLA 184
+G + ++DYS YPDCR + ++A++TA+ LG + + V + P + + K E KL
Sbjct: 116 IGAAEVFYAAHKSDYSVYPDCRKEFVKALDTALYLGNLWTPVELRAPFVDMTKAEIVKLG 175
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++ + E + +CY G C SC C R + +
Sbjct: 176 LEL------KVPYEHTWSCYEGGERP-------CLSCGTCLERTEAF 209
>gi|15892993|ref|NP_360707.1| trans-regulatory protein ExsB [Rickettsia conorii str. Malish 7]
gi|81527957|sp|Q92GQ2|QUEC_RICCN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|15620191|gb|AAL03608.1| trans-regulatory protein ExsB [Rickettsia conorii str. Malish 7]
Length = 228
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 33/245 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+
Sbjct: 1 MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKD 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAA 120
+ ++ + ++ + + I + N+ + N ++P T+VP RN IFL +A
Sbjct: 54 Y--NVKQHRVINIDLQSFIGSALTDDNIDVPKFQNTDQLPSDIPVTYVPARNTIFLSYAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWL 175
+A +G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ +
Sbjct: 112 GVAEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINM 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K ++G + ++ +CY D G C C +C R + K
Sbjct: 172 TKEQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAFK--K 218
Query: 236 EKYQD 240
QD
Sbjct: 219 NNVQD 223
>gi|222823734|ref|YP_002575308.1| ExsB family transcriptional regulator [Campylobacter lari RM2100]
gi|222538956|gb|ACM64057.1| transcriptional regulator, ExsB family [Campylobacter lari RM2100]
Length = 221
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 111/236 (47%), Gaps = 29/236 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
AL + SGG DS+ C A + L FDY QR E EC + +K+
Sbjct: 2 KKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYNQRTMLKERECFNKICEKL------- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ---DNNLPNTFVPGRNIIFLVFAATLA 123
++ +IL ++ + +I +SLT N+ + + + +PNT+VP RN IFL A +A
Sbjct: 55 --NIKTKYILDVSFIANIGGNSLTDLNLEIPKEKLHEKEVPNTYVPFRNGIFLSIAGAIA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETW 181
+ +I IGV + D SGYPDC + I+ IN G +V + TPL+ L K +
Sbjct: 113 EKEKCESIFIGVVQEDSSGYPDCSANFIQKASEFINEGTTKTCNVAIKTPLVHLSKGQIV 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+LA + LE + +CY + C C +C LR KG+ E K
Sbjct: 173 ELALK------EKVALECTWSCYEREDK-------ACGKCDSCLLRLKGFKEANVK 215
>gi|115373156|ref|ZP_01460458.1| ExsB protein [Stigmatella aurantiaca DW4/3-1]
gi|310824375|ref|YP_003956733.1| queuosine biosynthesis protein [Stigmatella aurantiaca DW4/3-1]
gi|115369912|gb|EAU68845.1| ExsB protein [Stigmatella aurantiaca DW4/3-1]
gi|309397447|gb|ADO74906.1| Queuosine biosynthesis protein [Stigmatella aurantiaca DW4/3-1]
Length = 229
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+TCL+ A L+ YGQR+ VELE V + +
Sbjct: 2 KKAVVLLSGGLDSTTCLAMAKADGFEPVCLAIHYGQRHAVELERARQVAETMGAR----- 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAATL 122
+ I+PL L I S+LT ++ + + +P T+VP RN++FL A L
Sbjct: 57 ----DFRIVPLD-LRGIGGSALTADIEVPKDRPETEMSHGIPVTYVPARNLLFLSLALGL 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
A +G +I IGV DYSGYPDCR I A + L ++ V VH PL + K
Sbjct: 112 AEVVGAHDIYIGVNAVDYSGYPDCRPQFIEAFASVATLATKAGVEGQRFQVHAPLSGMTK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +G + +H+CY G C C +C LR+KG+ E
Sbjct: 172 AQIIREGTRLG------VDYGLTHSCYDPDAK-----GRACGHCDSCVLRKKGFQEAG 218
>gi|157828917|ref|YP_001495159.1| trans-regulatory protein ExsB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933642|ref|YP_001650431.1| queuosine biosynthesis protein [Rickettsia rickettsii str. Iowa]
gi|167016450|sp|A8GTC6|QUEC_RICRS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189038938|sp|B0BUW5|QUEC_RICRO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157801398|gb|ABV76651.1| trans-regulatory protein ExsB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908729|gb|ABY73025.1| queuosine biosynthesis protein [Rickettsia rickettsii str. Iowa]
Length = 228
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 33/245 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+
Sbjct: 1 MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKD 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAA 120
+ ++ + ++ + + I + N+ + N ++P T+VP RN IFL +A
Sbjct: 54 Y--NVKQHRVINIDLQSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWL 175
+A +G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ +
Sbjct: 112 GVAEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINM 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K ++G + ++ +CY D G C C +C +R + K
Sbjct: 172 TKEQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIVRLDAFK--K 218
Query: 236 EKYQD 240
QD
Sbjct: 219 NNVQD 223
>gi|312876999|ref|ZP_07736973.1| exsB protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796230|gb|EFR12585.1| exsB protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 217
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
+ SGG DS+T L + V +SF YGQ++ ELE K +
Sbjct: 2 VLSGGVDSTTLLYDVKSQGYEVFAISFLYGQKHSKELEFAKKTCKLLS----------VP 51
Query: 74 DHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ ++ +++ S+LT D+ + T VP RN++ L +A A LG
Sbjct: 52 HKIVDISFFAELAPSALTTPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGAK 111
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G D+ YPDCR + + A++ A+ L + + P + +KK + + ++G
Sbjct: 112 KLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELEAPYVDMKKEDILRRGLELG- 170
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + +CY G + C C C R + + + K
Sbjct: 171 -----VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 206
>gi|118574278|sp|Q1GTF3|QUEC1_SPHAL RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
Length = 224
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 28/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ ++L SGG DS C A + R+ L+ DY QR++VELE + +
Sbjct: 4 KTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHVGA------ 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRL 126
+HI+ L S+LT ++ + ++P T+VP RN+IFL LA
Sbjct: 58 ----AEHIVLPLDLRRFGGSALTADIDVPKDGVGTDIPVTYVPARNLIFLSLTLGLAEAR 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETW 181
+IVIGV DYSGYPDCR I+ E L +H PL + K +
Sbjct: 114 QAADIVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVRFHIHAPLQHMTKADIA 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
A +G + S +CY G C +C +C LR+KG+ +
Sbjct: 174 AEAARLGMDAAM------SWSCYD-----PTPEGLHCGACDSCRLRRKGFADAG 216
>gi|312792427|ref|YP_004025350.1| exsb protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179567|gb|ADQ39737.1| exsB protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 217
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
+ SGG DS+T L + V +SF YGQ++ ELE K +
Sbjct: 2 VLSGGVDSTTLLYDVKSQGYEVFAISFLYGQKHSKELEFAKKTCKLLS----------VP 51
Query: 74 DHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ ++ +++ S+LT D+ + T VP RN++ L +A A LG
Sbjct: 52 HKIVDISFFAELAPSALTTPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGAK 111
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G D+ YPDCR + + A++ A+ L + + P + +KK + + ++G
Sbjct: 112 KLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELEAPYVDMKKEDILRRGLELG- 170
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + +CY G + C C C R + + + K
Sbjct: 171 -----VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGMK 206
>gi|87122357|ref|ZP_01078238.1| putative regulator protein [Marinomonas sp. MED121]
gi|86162332|gb|EAQ63616.1| putative regulator protein [Marinomonas sp. MED121]
Length = 221
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 29/233 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A A++++SGG DS T L AL D + +SF+YGQ++ EL V +++
Sbjct: 1 MANKAVVVYSGGMDSYTVLHKALSENDEIYAISFNYGQKHNKELIIAAQVCQELN----- 55
Query: 67 WKDSLGEDHILPLAILGDI-SHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + + SSLT + +D N+ +T VP RN++ + A
Sbjct: 56 -----IPHKVVDITAINSLMAGSSLTLDSDEAIPEGDYEDANMKSTVVPNRNMVLISMAI 110
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A L + + G D+ YPDCR + + A+ + V + P + K E
Sbjct: 111 AYAVSLEASKVYYGAHSGDHDIYPDCRPEFVEAMNAVSLIANYQAVEIIAPFLKSSKAEI 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ +NL ++ TCY G+ C C +C R + +
Sbjct: 171 ------LASGLAMNLDYSKTWTCYNGREK-------ACGKCGSCLERLASFKQ 210
>gi|229587053|ref|YP_002845554.1| Trans-regulatory protein ExsB [Rickettsia africae ESF-5]
gi|259551568|sp|C3PLH1|QUEC_RICAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|228022103|gb|ACP53811.1| Trans-regulatory protein ExsB [Rickettsia africae ESF-5]
Length = 228
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 33/245 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+
Sbjct: 1 MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKD 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAA 120
+ ++ + ++ + + I + N+ + N ++P T+VP RN IFL +A
Sbjct: 54 Y--NVKQHRVINIDLQSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWL 175
+A +G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ +
Sbjct: 112 GVAEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINM 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K ++G + ++ +CY D G C C +C R + +
Sbjct: 172 TKEQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAFK--R 218
Query: 236 EKYQD 240
QD
Sbjct: 219 NNVQD 223
>gi|223039865|ref|ZP_03610149.1| ExsB protein [Campylobacter rectus RM3267]
gi|222878874|gb|EEF13971.1| ExsB protein [Campylobacter rectus RM3267]
Length = 223
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ + SGG DS+ C A + L FDYGQR +E ++I E + K
Sbjct: 2 KKAVCIMSGGMDSTLCAVLAKRAGYEIVALHFDYGQRT---MEREKLAFEQICERIGALK 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L + I ++LT + + P+T+VP RN IF+ AA LA +
Sbjct: 59 KVN-----LDAHFIASIGGNALTDENLAIRKDGAKPDTPSTYVPFRNGIFISIAAALAEK 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKL 183
G + IG+ E D SGYPDC D I IE+A+N G + TPL+ L K +
Sbjct: 114 EGAQALYIGIVEEDGSGYPDCTADFIAKIESAVNAGTSKDFSLRIETPLVNLSKAGIVRK 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + G LE + +CY + + C C +C LR +G+ EK
Sbjct: 174 SLEAGS------PLELTWSCYELEDE-------ACGECDSCRLRLRGFELAGEK 214
>gi|327398275|ref|YP_004339144.1| exsB protein [Hippea maritima DSM 10411]
gi|327180904|gb|AEA33085.1| exsB protein [Hippea maritima DSM 10411]
Length = 239
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 28/238 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++++SGG DS+TCL WALD FD V T++F Y QR+ +E++ KK +EL + K
Sbjct: 2 KKAVIIYSGGLDSTTCLFWALDEFDEVHTITFYYAQRHSIEVD----FSKKTLELAQRIK 57
Query: 69 DSLGEDH--ILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATL 122
+ + H + L+ +G + + + +V + +P T+VP RN +FL A L
Sbjct: 58 NKTIKSHYFSIDLSQIGGSALTDPSIDVPKNRDEEKISSEIPITYVPFRNGVFLSITAAL 117
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKK 177
A + I NI+ G DYSGYPDCR D + A E AIN G ++ + TPL+ + K
Sbjct: 118 AEKNEIYNIIGGWNMLDYSGYPDCRDDFLTAFEKAINYGTKAGSQGKTFKILTPLLKMNK 177
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + G G C C AC LR KG+ E
Sbjct: 178 AQIILFGKKHGADYSY-------------SYSCYSGDGIPCGECDACILRAKGFKEAG 222
>gi|124026870|ref|YP_001015985.1| ATPase [Prochlorococcus marinus str. NATL1A]
gi|167016443|sp|A2C5G1|QUEC_PROM1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|123961938|gb|ABM76721.1| hypothetical ATPase [Prochlorococcus marinus str. NATL1A]
Length = 225
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ + L SGG DS+T A++ +V LSFDYGQR+ EL+ + K +
Sbjct: 3 EQTTIALLSGGIDSATAACIAMEAGQKVIGLSFDYGQRHLKELQAAADLAKNLN------ 56
Query: 68 KDSLGEDHI---LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
EDHI + L+ G S + ++ + K IQ N +PNT+VPGRN IF+ +LA
Sbjct: 57 ----LEDHITIKIDLSSWGGSSLTDTSQAIPTKGIQKNTIPNTYVPGRNTIFVAIGLSLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKKY 178
G I +G+ DYSGYPDCR D ++A + NL + + PL+ +K
Sbjct: 113 EARGANRIALGINAMDYSGYPDCRPDYLKAYQELANLSSRVGREGKGIKLWAPLLDWEKT 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++ A + + +E++ +CY G+ C C +C +R K E +
Sbjct: 173 KIFEEALRL------KIPIEKTWSCYQGESKP-------CGRCDSCRIRDKALKEIGRE 218
>gi|34581313|ref|ZP_00142793.1| trans-regulatory protein ExsB [Rickettsia sibirica 246]
gi|28262698|gb|EAA26202.1| trans-regulatory protein ExsB [Rickettsia sibirica 246]
Length = 228
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 33/245 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+
Sbjct: 1 MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKD 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAA 120
+ ++ + ++ + + I + N+ + N ++P T+VP RN IFL +A
Sbjct: 54 Y--NVKQHRVINIDLRSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWL 175
+A +G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ +
Sbjct: 112 GVAEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINM 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K ++G + ++ +CY D G C C +C R + K
Sbjct: 172 TKEQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAFK--K 218
Query: 236 EKYQD 240
QD
Sbjct: 219 NNVQD 223
>gi|72383131|ref|YP_292486.1| ExsB [Prochlorococcus marinus str. NATL2A]
gi|110816242|sp|Q46I95|QUEC_PROMT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|72002981|gb|AAZ58783.1| preQ(0) biosynthesis protein QueC [Prochlorococcus marinus str.
NATL2A]
Length = 225
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 32/239 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ + L SGG DS+T A++ +V LSFDYGQR+ EL+ + K +
Sbjct: 3 EHTTIALLSGGIDSATAACIAMEAGQKVIGLSFDYGQRHLKELQAAADLAKNLN------ 56
Query: 68 KDSLGEDHI---LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
EDHI + L+ G S + ++ + + IQ N +PNT+VPGRN IF+ +LA
Sbjct: 57 ----LEDHITIKIDLSSWGGSSLTDTSQAIPTQGIQKNTIPNTYVPGRNTIFVAIGLSLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKKY 178
G I +G+ DYSGYPDCR D ++A + NL + + + PL+ +K
Sbjct: 113 EARGANRIALGINAMDYSGYPDCRPDYLKAYQELANLSSRVGREGNGIKLWAPLLDWEKT 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++ A + + +E++ +CY G+ C C +C +R K E +
Sbjct: 173 KIFEEALRL------KIPIEKTWSCYQGESKP-------CGKCDSCRIRDKALKEIGRE 218
>gi|322369254|ref|ZP_08043819.1| exsB protein [Haladaptatus paucihalophilus DX253]
gi|320550986|gb|EFW92635.1| exsB protein [Haladaptatus paucihalophilus DX253]
Length = 256
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 30/242 (12%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKI 60
D + A++L SGG DS+T A +R L YGQR + E +C ++
Sbjct: 26 TDTGRPEKRAVILASGGMDSATAAYEARERGYEPFFLHTSYGQRTESKEFDCAKRQADEL 85
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFL 116
+ + L I SSLT + ++ + +P+T+VP RN L
Sbjct: 86 NAGFLH----------VETSHLAKIGGSSLTDDEMTVEDADLESDEVPDTYVPFRNANLL 135
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMW 174
A + A + IG D+SGYPDCR A + ++ G ++ + + P +
Sbjct: 136 SMAVSCAEANDCDAVFIGAHSEDFSGYPDCRPQFFEAFQAVVDTGTKDDTSIELVAPFVE 195
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K + + ++ ++ E + +CY + C +C +C LR + +
Sbjct: 196 FSKTDIAERGVEL------DVPYELTWSCYRAEEP-------ACGTCDSCALRLQAFQNV 242
Query: 235 KE 236
E
Sbjct: 243 GE 244
>gi|194335950|ref|YP_002017744.1| exsB protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194308427|gb|ACF43127.1| exsB protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 258
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 29/236 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVE 62
+ P A++L SGG DS + A + + +YGQR + ELE +
Sbjct: 5 VSTTQPKAVVLLSGGMDSLVTTAMAHAAGFELAAMHVNYGQRTWQKELESFRSICSHY-- 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK----NVAMKIQDNNLPNTFVPGRNIIFLVF 118
++ + + L I SSLT +Q +++P ++VP RN FL
Sbjct: 63 -------NIEQRLEVNADFLAQIGGSSLTDFSMPVGGADLQGSSIPTSYVPFRNAGFLSM 115
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLK 176
A + + +G + I IG E D SGYPDCR A T I LG E+ + + TPL+ ++
Sbjct: 116 AVSWSEVIGASKIFIGAVEEDSSGYPDCRKVFYDAFNTVIVLGTKPETDIAILTPLIEMQ 175
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K E + ++ + E S +CY + G C C +C R + +
Sbjct: 176 KSEIVRKGIEL------QVPFELSWSCYKSE-------GKACGLCDSCARRLRAFE 218
>gi|284164675|ref|YP_003402954.1| exsB protein [Haloterrigena turkmenica DSM 5511]
gi|284014330|gb|ADB60281.1| exsB protein [Haloterrigena turkmenica DSM 5511]
Length = 243
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 29/242 (11%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIV 61
D A++L SGG DS+T A DR + L YGQR + ELEC + ++
Sbjct: 10 DDESTKKRAVILLSGGMDSATAAYEARDRGYELYALHTSYGQRTEDRELECARRLADEL- 68
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLV 117
+ + L I SSLT + ++ + +P ++VP RN L
Sbjct: 69 --------DAADFLQIETGHLSAIGASSLTDDEMAVADADMESDEIPTSYVPFRNANLLA 120
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWL 175
A + A + IG D+SGYPDCR + A E +++G E+ +++ P +
Sbjct: 121 MAVSYAEANDCEAVFIGAHSEDFSGYPDCRPEFFEAFENVVDVGTKPETDISIEAPFVEW 180
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + D+ + E + +CY C +C AC R + +
Sbjct: 181 SKTDIAERGVDL------EVPYEHTWSCYRENEP-------ACGTCDACAFRLQAFQNVG 227
Query: 236 EK 237
+
Sbjct: 228 VR 229
>gi|320103234|ref|YP_004178825.1| preQ(0) biosynthesis protein QueC [Isosphaera pallida ATCC 43644]
gi|319750516|gb|ADV62276.1| preQ(0) biosynthesis protein QueC [Isosphaera pallida ATCC 43644]
Length = 246
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 33/236 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++L SGG DS+T L+ A+ ++ L+ YGQR+++ + +
Sbjct: 20 VVLLSGGLDSTTVLAEAVSKYSMPHALTIHYGQRHQI----------EREAARRVARAFN 69
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQ------DNNLPNTFVPGRNIIFLVFAATLAYR 125
H+ L S+LT ++ + +P T+VP RN IFL A A
Sbjct: 70 VVRHVELEVDLRAFGRSALTDDLEVPKDRSDTEIARGIPITYVPARNTIFLSLALAFAES 129
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYE 179
+G T++ +GV DYSGYPDCR + +RA E NL + VH P + K +
Sbjct: 130 IGSTDLFVGVNCVDYSGYPDCRPEYLRAFEALANLATKVGVEGTGRFRVHAPFLHATKAD 189
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ ++G + +H+CY + G C C +C LR + +
Sbjct: 190 IIRRGLELG------VDYSLTHSCYDPD-----DQGRACGRCDSCRLRLAAFRQVG 234
>gi|149923844|ref|ZP_01912234.1| ExsB ATPase [Plesiocystis pacifica SIR-1]
gi|149815301|gb|EDM74846.1| ExsB ATPase [Plesiocystis pacifica SIR-1]
Length = 239
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 40/253 (15%)
Query: 13 LLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+L SGG DS+T L+ A RV LSF YGQR+ +EL C ++
Sbjct: 2 VLLSGGLDSTTVLAIAAREAGQRVHALSFAYGQRHALELGCAARQARRF---------DA 52
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKI---------------QDNNLPNTFVPGRNIIFL 116
++ L+ LG + + + A ++ + +P+T+VP RN +FL
Sbjct: 53 AAHEVVDLSHLGRLVAPATSLVAASELAVPDAEARQRQLERGEAEAIPSTYVPARNTLFL 112
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWL 175
+A A +G +I +GV DYSGYPDCR + + A E L + + V V PL+ L
Sbjct: 113 SYALAWAEVVGARDIWLGVNAVDYSGYPDCRPEFVAAFEAMARLATKATDVRVRAPLIDL 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYL----GKRDKRYEWGYGCNSCPACYLRQKGW 231
+K + +G + ++ +CY G+ E C C +C LR++G+
Sbjct: 173 EKGAIIERGLGLG------VDYGDTTSCYDPSSVGEPGSADERPLACGRCESCMLRRQGF 226
Query: 232 M----EFKEKYQD 240
E +Y D
Sbjct: 227 AAAGVEDPTRYAD 239
>gi|291550956|emb|CBL27218.1| preQ(0) biosynthesis protein QueC [Ruminococcus torques L2-14]
Length = 227
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 39/239 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGG DS+T L A+ ++ D+V LS YGQ++ E+ + V +
Sbjct: 2 KALVLFSGGIDSTTALGLAIKKYGKDQVIALSISYGQKHDKEIRAAIAVAEYYG------ 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------------NTFVPGRNIIF 115
E L L+ + S+ SL + +I + + +T+VP RN +F
Sbjct: 56 ----VEHLFLDLSKIFQYSNCSLLQQSTEEIPEESYAEQISKTNGDKPVSTYVPFRNGLF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
L AA++A I G D +G YPDC +A+ AI G + + P +
Sbjct: 112 LSSAASIALSKECGVIYYGAHADDSAGFAYPDCSPVFNQAMNEAIWEGSGHQLKIEAPFV 171
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K E ++ ++G + E + +CY G C C C R +
Sbjct: 172 NVSKAEVVRIGLELG------VPYELTWSCYEGGEKP-------CGKCGTCIDRAAAFQ 217
>gi|157804083|ref|YP_001492632.1| trans-regulatory protein ExsB [Rickettsia canadensis str. McKiel]
gi|167016449|sp|A8EZR4|QUEC_RICCK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|157785346|gb|ABV73847.1| Trans-regulatory protein ExsB [Rickettsia canadensis str. McKiel]
Length = 227
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 35/244 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ L SGG DS+T L+ A + +SF+YGQRN EL +K+ EL+ ++
Sbjct: 2 KKLVNLVSGGADSATVLAIAQKMGYEIYAMSFNYGQRNNAEL-------RKVRELVKEYN 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ H + L S S+LT N + +++P T+VP RN IFL +A
Sbjct: 55 ---VKQHKIVNIDLRAFSGSALTDNNISVPHYHDVNELPDDVPVTYVPARNTIFLSYALG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLK 176
A +G +I IGV +D + YPDCR + I++ E NL +T+HTPL+ +
Sbjct: 112 FAEVIGAKDIFIGVHTSDSANYPDCRPEYIKSFEEMANLATNMGVQGKKITIHTPLIDMT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K + + ++G + + + +CY D C +C AC +R + K
Sbjct: 172 KEQIIRTGLELG------VDYKNTISCYEPTEDDLS-----CGTCLACMIRLDAFK--KN 218
Query: 237 KYQD 240
QD
Sbjct: 219 DIQD 222
>gi|189039052|sp|A8F2I5|QUEC_RICM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 228
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L + LSF+Y +RN E++ KI L+
Sbjct: 1 MKKKAVILLSGGPDSTTVLEIVSKMDYEIYALSFNYHRRNSPEVQ-------KIQGLIKD 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAA 120
+ ++ + ++ + + I + N+ + + ++P T+VP RN IFL +A
Sbjct: 54 Y--NVKQHRVINIDLQSFIGSALTDDNIDVPKFKHTDQLPSDIPVTYVPARNTIFLSYAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWL 175
+A +G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ +
Sbjct: 112 GVAEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINM 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K ++G + ++ +CY G C C +C R + K
Sbjct: 172 TKEQIIKKGLELG------VDYSKTISCYDPTE-----AGLSCGQCLSCIARLDAFK--K 218
Query: 236 EKYQD 240
QD
Sbjct: 219 NNVQD 223
>gi|157964844|ref|YP_001499668.1| trans-regulatory protein ExsB [Rickettsia massiliae MTU5]
gi|157844620|gb|ABV85121.1| Trans-regulatory protein ExsB [Rickettsia massiliae MTU5]
Length = 238
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L + LSF+Y +RN E++ KI L+
Sbjct: 11 MKKKAVILLSGGPDSTTVLEIVSKMDYEIYALSFNYHRRNSPEVQ-------KIQGLIKD 63
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAA 120
+ ++ + ++ + + I + N+ + + ++P T+VP RN IFL +A
Sbjct: 64 Y--NVKQHRVINIDLQSFIGSALTDDNIDVPKFKHTDQLPSDIPVTYVPARNTIFLSYAL 121
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWL 175
+A +G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ +
Sbjct: 122 GVAEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINM 181
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K ++G + ++ +CY G C C +C R + K
Sbjct: 182 TKEQIIKKGLELG------VDYSKTISCYDPTE-----AGLSCGQCLSCIARLDAFK--K 228
Query: 236 EKYQD 240
QD
Sbjct: 229 NNVQD 233
>gi|257091669|ref|YP_003165310.1| exsB protein [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257044193|gb|ACV33381.1| exsB protein [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 233
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 97/232 (41%), Gaps = 23/232 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L+ A LS DYGQR++ L
Sbjct: 11 KPAVVLLSGGLDSATTLAIARADGFACHCLSIDYGQRHRA-------ELAAAALLAEALG 63
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L L + G + + V + + +P T+VP RN + L A A LG
Sbjct: 64 AREHRQLRLTLEVFGGSALTDERIAVPVDGVHSGIPITYVPARNTVMLSLALAWAEVLGS 123
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
+I +GV DYSGYPDCR + I A E NL + V +H PLM L K E +
Sbjct: 124 RDIFVGVNAVDYSGYPDCRPEYIAAYEKMANLATRAAVQGASLTIHAPLMGLGKAEIIQR 183
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY RD G C C +C LR+ G+
Sbjct: 184 GITLG------VDYGLTVSCYQADRD-----GRACGVCDSCRLRRAGFSAAG 224
>gi|242309654|ref|ZP_04808809.1| queuosine biosynthesis protein queC [Helicobacter pullorum MIT
98-5489]
gi|239523655|gb|EEQ63521.1| queuosine biosynthesis protein queC [Helicobacter pullorum MIT
98-5489]
Length = 223
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 31/233 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS ++ AL V L +YGQR + + I +
Sbjct: 2 DKAIVLASGGLDSCVSIACALKDGYEVCLLHINYGQRTQSREDRAFS---DIADFY---- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-------TFVPGRNIIFLVFAAT 121
+ + I+ ++ L I SSL + +M I+++ +P+ T+VP RN + A +
Sbjct: 55 -GITQKLIVDISYLRQIGGSSLV-DSSMPIEEDTIPSAKGAIPSTYVPFRNANMISIAVS 112
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYE 179
A + I IG E D SGYPDCR + + +G+ ++ V + TPL+ L K E
Sbjct: 113 WAEVIRAKKIYIGAVEEDSSGYPDCREIFYQKFNDLLKVGLSPKNEVEILTPLIHLSKKE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ ++ L + +CY + C C +C LR +G+
Sbjct: 173 IVQKGIELEA------PLHLTWSCYQNENK-------ACGVCESCKLRLRGFE 212
>gi|119477972|ref|ZP_01618072.1| exsB protein [marine gamma proteobacterium HTCC2143]
gi|119448885|gb|EAW30127.1| exsB protein [marine gamma proteobacterium HTCC2143]
Length = 218
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++++SGG DS T L+ AL V +SF+YGQR+ EL+ K++
Sbjct: 2 KIVVIYSGGIDSFTILNKALQEGHDVLAISFNYGQRHNKELDYAARACKELG-------- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKN------VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++ ++ + + +S + N+ +T VP RN+I + A A
Sbjct: 54 --IVHKLVDISAMQTLMSNSSLMAKSDVIIPEGHYEAENMKSTVVPNRNMILISLAIGYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G + + G D++ YPDCR + + A+ A L + V P + K K
Sbjct: 112 VNEGASEVWYGAHAGDHTIYPDCRPEFVEAMSKASLLANFEPIAVVAPYLNTDKIAIVKE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+G L ++ TCY G+ C C +C R + + E
Sbjct: 172 GLAMG------LDYGKTWTCYNGREK-------ACGKCGSCVERLEAFAE 208
>gi|163783753|ref|ZP_02178739.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
gi|159880999|gb|EDP74517.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
Length = 215
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 33/234 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+T L A FD+V +SFDYGQR++VEL+ K + EL
Sbjct: 2 KKAIVLLSGGMDSATLLWLAKREFDKVWAISFDYGQRHQVELKYA----KGLAELA---- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ E I+ L I I S+L + +N P T VP RN+ FL A+ A
Sbjct: 54 -EVEEHIIVKLPIYESIKGSALIDESVEVPSEDYPENEPPITTVPMRNLNFLSIASAFAD 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKY 178
L I +I IGV D + YPDCR + I + E+AIN G + + V P + + K
Sbjct: 113 ALEIDHIGIGVHALD-TPYPDCRPEFITSAESAINAGSILTAKKKVRIHVWAPFLGMSKR 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
E L +++G + E++++CY G C CP C R++
Sbjct: 172 EIALLGKELG------VPYEKTYSCYRGTEPP-------CGECPTCRQREEALQ 212
>gi|2921156|gb|AAC05081.1| aluminum resistance protein [Arthrobacter viscosus]
Length = 187
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 80/174 (45%), Positives = 121/174 (69%), Gaps = 12/174 (6%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGGQDS+TCL WA++RF+ VE ++FDY QR+ +E+EC + K++
Sbjct: 24 VVFSGGQDSTTCLFWAMERFEEVEAVTFDYNQRHSLEIECAQKIAKELG----------I 73
Query: 73 EDHILPLAILGDISHSSLTK-NVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
HIL +++L ++ ++LT+ ++A++ +D LP+TFVPGRN++FL FA LA ++G +
Sbjct: 74 THHILDMSLLNQLAPNALTRSDIAVEDGEDGELPSTFVPGRNLLFLSFAGVLASQIGAKH 133
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
IV GVCETD+SGYPDCR I+++ +NL M+ + TPLMWL K ETW+LA
Sbjct: 134 IVTGVCETDFSGYPDCRDVFIKSLNVTLNLSMDQSFVIDTPLMWLNKEETWELA 187
>gi|193213013|ref|YP_001998966.1| exsB protein [Chlorobaculum parvum NCIB 8327]
gi|254764320|sp|B3QPB3|QUEC_CHLP8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|193086490|gb|ACF11766.1| exsB protein [Chlorobaculum parvum NCIB 8327]
Length = 227
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A+LL SGG DS + A + + +YGQR + ELEC +
Sbjct: 2 KAVLLVSGGMDSLVATALAHHHGFELAAMHVNYGQRTWQKELECFRQICDHY-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ + + LG I SSLT + ++P ++VP RN FL A + +
Sbjct: 54 -GIEKRLEIDAGFLGAIGGSSLTDAAIPVGPADLAGTDIPTSYVPFRNANFLSMAVSWSE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
+G I IG E D SGYPDCR A I G E+ + + TPL+ + K E K
Sbjct: 113 VIGANRIYIGAVEEDSSGYPDCRKVFYDAFNQVIEHGTRPETSIEIVTPLIDMSKAEIVK 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++ + S +CY + G C C +C R + +
Sbjct: 173 RGMEL------DAPFHFSWSCYKSE-------GKACGVCDSCARRLRAFA 209
>gi|299139077|ref|ZP_07032253.1| exsB protein [Acidobacterium sp. MP5ACTX8]
gi|298598757|gb|EFI54919.1| exsB protein [Acidobacterium sp. MP5ACTX8]
Length = 236
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 100/237 (42%), Gaps = 22/237 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVR-----KKI 60
P A++ SGG DS+ C + A R L F YGQR + EL V +
Sbjct: 2 SRPKAVVCLSGGMDSTVCAALA-ARDYESYGLHFSYGQRTEARELASARAVAAAVGLHDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+EL +G + +I + + + +P T+VP RN FL A
Sbjct: 61 LELKTDLFRRIGGSALTDSSIAVPEAGDENADETS-HRTGSEVPVTYVPFRNAHFLSAAV 119
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYE 179
+ A LG T + IG E D SGYPDCR A I G E + V TPL+ L+K E
Sbjct: 120 SWAEVLGATTVFIGAVEQDSSGYPDCRPAYYEAFNQLIRTGTKEGEIAVVTPLIRLRKSE 179
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+L ++G L S +CY G+ + C C +C LR + + E
Sbjct: 180 IVRLGVELGA------PLHVSWSCYSGETE-------ACGVCESCVLRLRAFAEAGA 223
>gi|51473874|ref|YP_067631.1| trans-regulatory protein ExsB [Rickettsia typhi str. Wilmington]
gi|81389982|sp|Q68W43|QUEC_RICTY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|51460186|gb|AAU04149.1| trans-regulatory protein ExsB [Rickettsia typhi str. Wilmington]
Length = 227
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 35/244 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ L SGG DS+T L+ A + + +SF+YGQRN EL+ K+ EL+ K+
Sbjct: 2 KKSVNLLSGGIDSATVLAIASEMCYEIHAMSFNYGQRNHAELQ-------KVKELIKKY- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + I+ + L S+LT + ++ +P T+VP RN IFL +A
Sbjct: 54 -NVKQHKIVDID-LRAFGGSALTDDNIDIPHYHSINELPEIVPVTYVPARNTIFLSYALG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLK 176
A +G +I IGV +D + YPDCR + I++ E +N+ +T+H PL+ +
Sbjct: 112 FAEVIGAQDIFIGVHTSDSANYPDCRPEYIKSFEKMVNVATNMGIQGKKITIHAPLIDMT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K + + +G + + + +CY D C +C AC +R + K
Sbjct: 172 KEQIIRTGLKLG------VDYKNTISCYTPTEDDLS-----CGNCLACIIRLDAFK--KN 218
Query: 237 KYQD 240
QD
Sbjct: 219 NIQD 222
>gi|71278544|ref|YP_269637.1| exsB protein [Colwellia psychrerythraea 34H]
gi|110816204|sp|Q47ZY2|QUEC2_COLP3 RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
gi|71144284|gb|AAZ24757.1| exsB protein [Colwellia psychrerythraea 34H]
Length = 219
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++SGG DS T L+ A+ V LSFDYGQ++ EL V ++
Sbjct: 2 KKLVVIYSGGMDSFTALNKAVKEGFDVYALSFDYGQKHNKELIYAQNVCNELN------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
IL + + + SS + + + +N+ +T VP RN+I + A A
Sbjct: 55 ---VPHKILDIKSISTLFTSSSLVSDDINVPDGHYEADNMKSTVVPNRNMILISLAIGYA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + G D+ YPDCR + ++ ++ A + V VH P + K K
Sbjct: 112 VDIEAEGVWYGAHSGDHLIYPDCRPEFVKVMDQASKVANFEPVYVHAPYLNTDKIGILKD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G L ++ TCY GK C +C +C R + +
Sbjct: 172 GIKMG------LDYSKTWTCYQGKEK-------ACGTCGSCVERLEAFQ 207
>gi|322378796|ref|ZP_08053225.1| ExsB trans-regulatory protein [Helicobacter suis HS1]
gi|322380645|ref|ZP_08054797.1| ExsB transcriptional regulator [Helicobacter suis HS5]
gi|321146967|gb|EFX41715.1| ExsB transcriptional regulator [Helicobacter suis HS5]
gi|321148826|gb|EFX43297.1| ExsB trans-regulatory protein [Helicobacter suis HS1]
Length = 242
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 139/238 (58%), Gaps = 21/238 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
S +L FSGGQDS+T W+L F++ L FDY QR+ +ELE + ++
Sbjct: 15 KSSCVLCFSGGQDSTTLALWSLSAFEKTYLLGFDYAQRHGIELEQATKIATQLK------ 68
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAATL 122
IL L L ++S+S+L K IQ ++ P +FVP RN +F+ A
Sbjct: 69 ----LPFKILSLDFLQELSNSALFKKSPQSIQAPHMKNPQLPASFVPDRNALFVTLAHAY 124
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL---GMESHVTVHTPLMWLKKYE 179
A+ LG + +++G+ E DYSGY DCR + + +++T++NL G +T+ P M++ K +
Sbjct: 125 AFNLGASFVLLGISEQDYSGYFDCRQNFLESLQTSLNLGAFGTPEGITLLAPFMFMSKAQ 184
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ LAQ +G ++ ILE++HTCY+G R R+ +GYGC +CPAC LRQKG+ F ++
Sbjct: 185 EFALAQKLG---FLDFILEQTHTCYIGDRSTRHPYGYGCGTCPACLLRQKGYENFLKE 239
>gi|166365323|ref|YP_001657596.1| transcription regulator ExsB-like protein [Microcystis aeruginosa
NIES-843]
gi|189038927|sp|B0JIA6|QUEC_MICAN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|166087696|dbj|BAG02404.1| transcription regulator ExsB homolog [Microcystis aeruginosa
NIES-843]
Length = 230
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 32/238 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T + AL ++ LSF YGQR++ EL + +
Sbjct: 1 MTKKAIILLSGGLDSATTAAIALAAGYQLIALSFRYGQRHERELAAAKKIANFL------ 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATL 122
++ E H++ + L S+LT Q+ + +P T+VPGRN +F+ A +L
Sbjct: 55 ---NIKEHHLIEV-NLSLWGGSALTDQSIAIPQEGINPDIIPITYVPGRNTVFISIALSL 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
A I +G+ DYSGYPDCR + + A +T NL ++ + + PL+ K
Sbjct: 111 AEAREAEAIYLGINAVDYSGYPDCRPEYLDAFQTLANLSSKAGLEGKAPQLIAPLVMDSK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + A +G + + ++ +CY G+ + C C +C +R + +E
Sbjct: 171 VDIVRRAVSLG------VPIADTWSCYQGEVEP-------CGLCDSCRIRDQALIEAG 215
>gi|257452359|ref|ZP_05617658.1| queuosine biosynthesis protein QueC [Fusobacterium sp. 3_1_5R]
gi|257465849|ref|ZP_05630160.1| queuosine biosynthesis protein QueC [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917006|ref|ZP_07913246.1| archaeosine biosynthesis protein queC [Fusobacterium gonidiaformans
ATCC 25563]
gi|317058902|ref|ZP_07923387.1| archaeosine biosynthesis protein queC [Fusobacterium sp. 3_1_5R]
gi|313684578|gb|EFS21413.1| archaeosine biosynthesis protein queC [Fusobacterium sp. 3_1_5R]
gi|313690881|gb|EFS27716.1| archaeosine biosynthesis protein queC [Fusobacterium gonidiaformans
ATCC 25563]
Length = 231
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 26/233 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+L SGG DS+TCL+ A+D++ D+V LS YGQ++ E+ + K
Sbjct: 2 KVLVLLSGGLDSTTCLAIAVDKYGADQVVALSASYGQKHTKEILSARAIAK----YYQVE 57
Query: 68 KDSLGEDHILPLAILGDISHSS-----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L I + +SHS+ + + Q+ + +T+VP RN +FL AA++
Sbjct: 58 LLELNLSKIFSYSNCSLLSHSTEEVPHHSYAEQLNQQEEEILSTYVPFRNGLFLSTAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + I+ G D +G YPDC A+ TAI G V V P + L K +
Sbjct: 118 ALSKECSIILYGAHSDDAAGNAYPDCSPAFNEAMNTAIYEGSGRQVKVEAPFIGLHKKDI 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL + + E + +CY GK + C C C R+K + E
Sbjct: 178 VKLGLTL------QVPYELTWSCYEGKE-------HSCGECGTCIDREKAFEE 217
>gi|78185805|ref|YP_378239.1| ExsB [Synechococcus sp. CC9902]
gi|110816271|sp|Q3AUG1|QUEC_SYNS9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78170099|gb|ABB27196.1| ExsB [Synechococcus sp. CC9902]
Length = 226
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+A+ L SGG DS+T + A + DRV LSFDYGQR++ EL+ V +
Sbjct: 3 QRTAIALLSGGLDSATAAALAQEAGDRVIGLSFDYGQRHRRELKAAAKVAAHL------- 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L E H + + LG S+LT +++ +P T+VPGRN +F+ +LA
Sbjct: 56 --NLAEHHQVDV-NLGAWGGSALTDPNQTVPTSGVEEGVIPVTYVPGRNTVFIAIGLSLA 112
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G +V+GV DYSGYPDCR D + A +T L ++ H P +W + W
Sbjct: 113 EARGAERLVLGVNAVDYSGYPDCRPDYLDAFQTLATLSSKAGREGHGPQLWAPLVQ-WSK 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + + + + E+ +CY G C C +C +R E
Sbjct: 172 TKIVDEALRLGVPIGETWSCYSGGSRP-------CGVCDSCRIRDSALREAG 216
>gi|315453291|ref|YP_004073561.1| putative queuosine biosynthesis protein [Helicobacter felis ATCC
49179]
gi|315132343|emb|CBY82971.1| Putative queuosine biosynthesis protein [Helicobacter felis ATCC
49179]
Length = 243
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 138/238 (57%), Gaps = 21/238 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K + +L FSGGQDS+T WA F++ L FDY Q++ +EL + + +
Sbjct: 17 KTHTCVLCFSGGQDSTTLALWAKRVFEQTYLLGFDYDQKHAIELAQAHKIARMLE----- 71
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAAT 121
+L L+ L +IS S+L + + Q +LP++FVP RN +F+ A
Sbjct: 72 -----LPYKVLDLSCLQEISTSALFAHTSHALNTPHPQAQDLPSSFVPDRNALFITLAHA 126
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM---ESHVTVHTPLMWLKKY 178
A+ LG +++GV DYSGY DCR + I +++T++NLG + + + PLM+ K
Sbjct: 127 YAFNLGAQAVLLGVSMQDYSGYFDCRQNFIESLQTSLNLGAFGKKEGINLLAPLMFSSKA 186
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ ++LA +GG + LILE +HTCY G R+ R+E+GYGC CPAC LRQ+G+M+F +
Sbjct: 187 QEFQLAHALGG---LELILEHTHTCYEGVRESRHEFGYGCGVCPACQLRQQGYMKFLD 241
>gi|317968278|ref|ZP_07969668.1| PP-loop superfamily ATPase [Synechococcus sp. CB0205]
Length = 233
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 20/236 (8%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ P+A+ L SGG DS+T + A RV LSFDYGQR++ EL+ V + +
Sbjct: 8 PSTETLPTAIALLSGGLDSATAAALAQAEGYRVIGLSFDYGQRHRRELQAAAAVAQTL-- 65
Query: 63 LMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFA 119
L E + LA G + + +V + +Q+ +P+T+VPGRN +F+
Sbjct: 66 -------GLAEHQSIHVNLAAWGGSALTDTAMDVPNEGVQEGVIPSTYVPGRNTVFIAIG 118
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+LA G +V+GV DYSGYPDCR D + A +T +L ++ H +W E
Sbjct: 119 LSLAEARGAERLVLGVNAVDYSGYPDCRPDYLGAFQTLADLASKAGREGHGTQLWAPLVE 178
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
W + + + + ++++ +CY G C C +C +R +E
Sbjct: 179 -WSKTKIVEEALRLGVPIDQTWSCYSGGEQP-------CGVCDSCRIRDAALIEAG 226
>gi|238651010|ref|YP_002916866.1| trans-regulatory protein ExsB [Rickettsia peacockii str. Rustic]
gi|259551571|sp|C4K2L7|QUEC_RICPU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|238625108|gb|ACR47814.1| trans-regulatory protein ExsB [Rickettsia peacockii str. Rustic]
Length = 228
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 33/245 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T L + LSF+Y +RN +E++ KI L+
Sbjct: 1 MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQ-------KIQGLIKD 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAA 120
+ ++ + ++ + + I + N+ + N ++P T+VP RN IFL +A
Sbjct: 54 Y--NVKQHRVINIDLQSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYAL 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWL 175
+ +G +I IGV DY+ YPDCR + I++ E NL +T+H PL+ +
Sbjct: 112 GVVEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINM 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + K ++G + ++ +CY D G C C +C R + K
Sbjct: 172 TKEQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAFK--K 218
Query: 236 EKYQD 240
QD
Sbjct: 219 NNVQD 223
>gi|330506762|ref|YP_004383190.1| ExsB protein [Methanosaeta concilii GP-6]
gi|328927570|gb|AEB67372.1| ExsB protein [Methanosaeta concilii GP-6]
Length = 220
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 28/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS+T L L V+ L+F+YGQ++K E++C + + ++
Sbjct: 2 KAVLILSGGLDSTTLLYKLLADGYLVDALTFNYGQKHKKEIDCAIAITSRLD-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ L+ L + S+L + + T VP RN+I L AA A
Sbjct: 54 --VPHQIIDLSTLAAFLGESALLGKKEVPSCHYTEEAARQTVVPNRNMIMLSVAAGYAEA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKLA 184
IT + + D + YPDCR + + A++ AI LG + V + P + + K + ++
Sbjct: 112 HEITELFYAAHKNDQTIYPDCRPEFVEALKPAIRLGTAWNPVELQAPFVHMTKADIVRMG 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ + E + +CY GK C +CP C R++ +
Sbjct: 172 LKL------QVPYELTWSCYKGKAMP-------CRTCPTCIEREEAFA 206
>gi|291519766|emb|CBK74987.1| preQ(0) biosynthesis protein QueC [Butyrivibrio fibrisolvens 16/4]
Length = 228
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 38/238 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGG DS+TCL A+ + + V LS YGQR+ E++ V +
Sbjct: 2 KALVLVSGGVDSTTCLGMAVKEYGSENVVGLSIFYGQRHDKEIKAADAVCEHYN------ 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-----------NTFVPGRNIIFL 116
E L L+ + S +L ++ +I + + +T+VP RN +FL
Sbjct: 56 ----VEHITLDLSTMFQFSDCTLLQHSDGEIPEESYAEQLAKTDGKPVSTYVPFRNGLFL 111
Query: 117 VFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A+ +A G + I G D +G YPDC A+ TAI G + + P +
Sbjct: 112 SSASAIALSKGCSKIYYGAHSDDAAGNAYPDCSEAFNNAMNTAIYEGSGKQLQIEAPFIN 171
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L K + K +IG + E + +CY G C C C R+ +
Sbjct: 172 LTKAQVVKKGLEIG------VPYELTWSCYEGHEK-------ACGKCGTCIDRKAAFE 216
>gi|78186427|ref|YP_374470.1| ExsB [Chlorobium luteolum DSM 273]
gi|110816240|sp|Q3B5F4|QUEC_PELLD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78166329|gb|ABB23427.1| ExsB [Chlorobium luteolum DSM 273]
Length = 227
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 29/230 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A+LL SGG DS + A + + +YGQR + EL+ +
Sbjct: 2 KAVLLLSGGMDSLVTTAIAHREGYELAAMHVNYGQRTWQKELQSFRSIADHY-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
S+ E + LG I SSLT + ++ + +P ++VP RN FL A + +
Sbjct: 54 -SITERLEVNADFLGRIGGSSLTDHSMPVAGADLRGSGIPTSYVPFRNACFLSMAVSWSE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
+G + IG E D SGYPDCR A I LG E+ +T+ TPL+ ++K + +
Sbjct: 113 VIGAERLFIGAVEEDSSGYPDCRRVFYDAFNRVIELGTRPETGITILTPLIAMQKAQIVR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++G E S +CY + G C C +C R + +
Sbjct: 173 NGMELGA------PFEHSWSCYRSE-------GRACGVCDSCARRLRAFE 209
>gi|222475966|ref|YP_002564487.1| exsB protein [Halorubrum lacusprofundi ATCC 49239]
gi|222454337|gb|ACM58601.1| exsB protein [Halorubrum lacusprofundi ATCC 49239]
Length = 229
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 29/238 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
SA++L SGG DS+T + A+++ L YGQR + E EC + +++
Sbjct: 2 SNKSAVILVSGGMDSATAVYEAIEQGYEPYFLHTSYGQRTEDKEYECAKALAEEVDAADF 61
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ L I SSLT ++ + +P ++VP RN L A +
Sbjct: 62 LH---------IETGHLSQIGASSLTDEEMEVADADMESDEIPTSYVPFRNANLLSMATS 112
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYE 179
A + IG D+SGYPDCR A + I++G E+ + + P + K E
Sbjct: 113 YAEATESEALFIGAHSEDFSGYPDCRPAFFDAFQNVIDVGTKPETAIELKAPFVEWSKTE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
K ++ ++ + + +CY + C +C AC R + + +
Sbjct: 173 IAKRGLEL------DVPYDMTWSCYRDEEP-------ACGTCDACAFRLEAFRNAGSR 217
>gi|124486431|ref|YP_001031047.1| hypothetical protein Mlab_1618 [Methanocorpusculum labreanum Z]
gi|189038924|sp|A2STX4|QUEC_METLZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|124363972|gb|ABN07780.1| exsB protein [Methanocorpusculum labreanum Z]
Length = 222
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 31/235 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
A+ L SGG DS+T A + L +YGQR + ELE KK+ +++
Sbjct: 2 KKAVCLLSGGMDSTTLAFVAKKMGYDILALHVNYGQRTERKELEAA----KKVADVL--- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAATL 122
+ E + L SSLT ++ ++++ L PNT+VP RN + A +
Sbjct: 55 --GVVEFLEISLDYFKKFGASSLT-DMNIEVEAGVLGRADNPNTYVPFRNGNLISIATSY 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYET 180
I IGV D++GYPDC I A++ AI +G E + + TP + + K +
Sbjct: 112 CESRDGEAIFIGVQSGDHTGYPDCTPRFIEAMQHAIYVGTQTEKSIELLTPFVMMNKTDI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K ++ + E + +CY E C C +C R K + +
Sbjct: 172 LKEGMEL------CVPYEHTWSCYS-------ENDEACGVCSSCLARLKAFADLG 213
>gi|258593845|emb|CBE70186.1| Queuosine biosynthesis protein queC [NC10 bacterium 'Dutch
sediment']
Length = 233
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 73/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+L SGG DS+T + A + ++ L+F YGQR+ E+E + +
Sbjct: 2 VLLSGGIDSATAAALAKAKGYQLHALTFRYGQRHAREVESATRIAAALGA---------S 52
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFAATLAYRL 126
+ IL L L I S+LT + + +P T+VP RN IFL +A A +
Sbjct: 53 QHLILDLD-LRRIGGSALTAEIPVPKGREMDEIGSGIPVTYVPARNTIFLSYALAWAEVI 111
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKYET 180
G +IV+GV DYSGYPDCR + I A E NL + ++TPL+ L K E
Sbjct: 112 GSEDIVLGVNAIDYSGYPDCRPEYIAAFERMANLATRAGAEGRSTLTIYTPLIHLSKAEI 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G + + +CY +D G C +C +C LR+KG+ E
Sbjct: 172 IRRGAALG------IDFRLTWSCYDPTQD-----GRPCRACDSCILREKGFAEAG 215
>gi|21673367|ref|NP_661432.1| ExsB protein [Chlorobium tepidum TLS]
gi|81791733|sp|Q8KF00|QUEC_CHLTE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21646463|gb|AAM71774.1| exsB protein [Chlorobium tepidum TLS]
Length = 227
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPK 66
A+LL SGG DS + A + + +YGQR + ELEC ++CV IV+ +
Sbjct: 2 RAVLLVSGGMDSLVATALAHREGLELAAMHVNYGQRTWQKELECFRQICVHYGIVDRLE- 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ L I SSLT + ++P ++VP RN FL A +
Sbjct: 61 ----------VDAMFLSAIGGSSLTDATIPVGPADLAGTDIPTSYVPFRNANFLSMAVSW 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
+ +G I IG E D SGYPDCR A I G E+ + + TPL+ + K E
Sbjct: 111 SEVIGANRIYIGAVEEDSSGYPDCRKVFYDAFNQVIEHGTRPETRIEIVTPLIAMSKAEI 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ ++ + S +CY + G C C +C R + +
Sbjct: 171 VRRGMEL------DAPFHFSWSCYKSE-------GKACGVCDSCARRLRAFA 209
>gi|15606187|ref|NP_213564.1| trans-regulatory protein ExsB [Aquifex aeolicus VF5]
gi|81343542|sp|O67003|QUEC_AQUAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|2983380|gb|AAC06966.1| trans-regulatory protein ExsB [Aquifex aeolicus VF5]
Length = 218
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 111/238 (46%), Gaps = 33/238 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+KK ++L SGG DS+T L A F +V +SFDYGQR+KVEL+ + K
Sbjct: 1 MKKHDGIIVLLSGGMDSATLLWLAKREFKKVYAISFDYGQRHKVELKYAKELAK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAA 120
+ + I+ + + S+L + +N P T VP RN+IFL A+
Sbjct: 55 ---LAEVEDHFIVQVPFYTSLKGSALIDESVEVPKGEYPENEPPVTTVPMRNLIFLSIAS 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMW 174
A L + I IGV D + YPDCR + I A E AIN G + + V+ P +
Sbjct: 112 AFADNLEVNYIGIGVHALD-TPYPDCRPEFITAAEAAINAGSTFVAKKKERMHVYAPFLG 170
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K + L +++G + E++++CY+G C CP C R++
Sbjct: 171 MSKRDIALLGKELG------VPFEKTYSCYMGTEPP-------CGECPTCIQREEALR 215
>gi|118574283|sp|Q3AR02|QUEC_CHLCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 228
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 100/233 (42%), Gaps = 29/233 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A+LL SGG DS + A + + +YGQR + EL +
Sbjct: 2 KAILLLSGGMDSLVTTAIAQQAGFELAAMHVNYGQRTMQRELNSFRAICSHY-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
S+ + + LG I SSLT ++ + +P ++VP RN FL A + A
Sbjct: 54 -SIQQRLEINADFLGKIGGSSLTDLSMPVSVANLESHAIPASYVPFRNAGFLSMAVSWAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
+G I IG E D SGYPDCR A I LG E+H+ V TPL+ LKK+E +
Sbjct: 113 VIGAERIFIGAVEEDSSGYPDCRKIFYEAFNRVIELGTKPETHIEVVTPLIALKKWEIVR 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++ + S +CY + G C C +C LR + + +
Sbjct: 173 KGIEL------HAPFAFSWSCYKNE-------GQACGVCDSCALRLRAFEQAG 212
>gi|153006757|ref|YP_001381082.1| exsB protein [Anaeromyxobacter sp. Fw109-5]
gi|189038891|sp|A7HHA2|QUEC_ANADF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|152030330|gb|ABS28098.1| exsB protein [Anaeromyxobacter sp. Fw109-5]
Length = 233
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 108/243 (44%), Gaps = 36/243 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A++L SGG DS+TCL+ A LS DYGQR+K EL + + +
Sbjct: 4 RPTKRAVVLLSGGLDSTTCLAVARRDGFEAHCLSVDYGQRHKGELARARRLSRALGA--- 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN--------NLPNTFVPGRNIIFLV 117
DH + L S+LT + A+ + +P T+VP RN + L
Sbjct: 61 -------ADHRVVKVDLSAFGGSALT-DRAIAVPKGRSGRRRAAEIPVTYVPARNTVLLA 112
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPL 172
A A LG ++ +GV DYSGYPDCR +RA E + ++ V +H PL
Sbjct: 113 LALAHAETLGAEDVYVGVNAIDYSGYPDCRPAFLRAFERLATVATKAGVEGRPLRIHAPL 172
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K +L +G + + +CY R G C +C AC LR+KG+
Sbjct: 173 LRLTKAGIVRLGTSLG------VPYRVTLSCYDPVR------GRACGACDACVLRRKGFA 220
Query: 233 EFK 235
E
Sbjct: 221 EAG 223
>gi|145219402|ref|YP_001130111.1| exsB protein [Prosthecochloris vibrioformis DSM 265]
gi|189038933|sp|A4SDQ0|QUEC_PROVI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|145205566|gb|ABP36609.1| exsB protein [Chlorobium phaeovibrioides DSM 265]
Length = 227
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A++L SGG DS + A + ++ + +YGQR + ELE +
Sbjct: 2 KAVVLLSGGMDSLVTTAIAHNEGLQLAAMHVNYGQRTWQRELESFRSIAGHY-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+GE + LG I SSLT + +Q +P ++VP RN FL A + A
Sbjct: 54 -GIGELLEVNADFLGTIGGSSLTDHTMAVSGADLQGTAIPTSYVPFRNACFLSMAVSWAE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
+G + IG E D SGYPDCR A I LG E+ + + TPL+ ++K +
Sbjct: 113 VIGAQKLYIGAVEEDSSGYPDCRKVFYDAFNKVIELGTKPETGIEILTPLIAMQKAGIVE 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++ + S +CY + G C C +C R + +
Sbjct: 173 KGMEL------DAPFHYSWSCYKSE-------GKACGVCDSCARRLRAFE 209
>gi|307565167|ref|ZP_07627671.1| protein ExsB [Prevotella amnii CRIS 21A-A]
gi|307346125|gb|EFN91458.1| protein ExsB [Prevotella amnii CRIS 21A-A]
Length = 234
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 30/234 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K +++++ SGG DS T L D D +SFDYGQ + K + L
Sbjct: 16 KSMRNSVIIVSGGLDSITLLYEKAD--DIALAISFDYGQNHS----------KNELPLAE 63
Query: 66 KWKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAA 120
LG HI +PL + SSL + ++ N+ +T VP RN I L A
Sbjct: 64 YHCKKLGIPHITIPLKFMNVYLKSSLLEGSEAIPEGHYEEENMKSTVVPFRNGIMLSIAI 123
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + ++I D++ YPDCR + I A+ A G +V V P + K E
Sbjct: 124 GIAESHNLKYVMIANHGGDHTIYPDCRPEFISAMNKAACAGTYINVKVVAPYTNISKTEI 183
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K +G + ++ +CY G C C C R++ +++
Sbjct: 184 VKRGVALG------IDYNKTWSCYKGGEK-------HCGKCGTCVERKEAFLKA 224
>gi|159026229|emb|CAO86385.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 225
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+T + A+ ++ LSF YGQR++ EL + +
Sbjct: 1 MTKKAIILLSGGLDSATTAAIAIAAGYQLIALSFRYGQRHERELAAAKKIANFL------ 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATL 122
++ E H++ + L S+LT Q+ N +P T+VPGRN +F+ A +L
Sbjct: 55 ---NIKEHHLIEV-NLSLWGGSALTDQSIAIPQEGINPNIIPITYVPGRNTVFISIALSL 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
A I +G+ DYSGYPDCR + A +T NL ++ + + PL+ K
Sbjct: 111 AEARAAEAIYLGINAVDYSGYPDCRPQYLEAFQTLANLSSKAGLEGKAPQLIAPLVMDSK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + A +G + + ++ +CY G+ C C +C +R + +E
Sbjct: 171 VDIVRRAVSLG------VPIADTWSCYQGEVKP-------CGLCDSCRIRDQALIEAG 215
>gi|311696705|gb|ADP99578.1| ExsB protein [marine bacterium HP15]
Length = 209
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
DS T L A +R +V LSF+YGQR+ ELEC V + + ++
Sbjct: 1 MDSYTLLHLARERGYQVHALSFNYGQRHVRELECARSVCEALG----------VPHKVID 50
Query: 79 LAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ + + ++ SSLT ++ + +++++ T VP RN+I L A A G + G
Sbjct: 51 IRAMSEVMAGSSLTSDIDVPEGHYEEDSMKATVVPNRNMILLSLATGYAVTAGAGAVWYG 110
Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
D++ YPDCR + + ++ + V + P M + K + +G
Sbjct: 111 AHGGDHAIYPDCRPEFVDKMDAVCRVANYEPVGIEAPFMTMDKGQILAEGLRLG------ 164
Query: 195 LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L ++ TCY G+ C C +C R + +
Sbjct: 165 LDYAQTWTCYNGRE-------RACGRCGSCVERLEAFA 195
>gi|292670246|ref|ZP_06603672.1| transcription regulator ExsB [Selenomonas noxia ATCC 43541]
gi|292648198|gb|EFF66170.1| transcription regulator ExsB [Selenomonas noxia ATCC 43541]
Length = 232
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 32/240 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS TC++ A + +SFDY QR+ EL C +
Sbjct: 6 MGEKAVVLLSGGLDSCTCMAVADAAGHELYPVSFDYHQRHIRELSCAKKIAVHYHA---- 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+H++ + + S+LT + Q ++P T+VP RN+IFL +A
Sbjct: 62 ------AEHLIIETNMNAVGGSALTDDTIDVPEGDAQRTDIPATYVPARNLIFLSYALGY 115
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKK 177
A R+G T++ IGV DYSGYPDCR I A + A + + V TPL L K
Sbjct: 116 AERVGATHLYIGVNSVDYSGYPDCRPAFIAAFQAAADAATAAAERGRRIIVETPLQSLSK 175
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
E +L +G E + +CY G+ + C C +C LR +G+ +
Sbjct: 176 GEIIRLGTKLGA------PYELTTSCYRGEEE-------ACGVCDSCVLRLRGFAAAGRR 222
>gi|300712359|ref|YP_003738173.1| exsB protein [Halalkalicoccus jeotgali B3]
gi|299126042|gb|ADJ16381.1| exsB protein [Halalkalicoccus jeotgali B3]
Length = 222
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 99/230 (43%), Gaps = 22/230 (9%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T A + + L YGQR + E +C + + EL
Sbjct: 4 AVILLSGGMDSATAAYEARETGYEIAALHTSYGQRTEGKEYDCAHWLAE---ELDAADFL 60
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ DH LA +G S + + V + +P+T+VP RN L A + A G
Sbjct: 61 HIETDH---LAAIGGSSLTDESMAVGDASEGEEIPDTYVPFRNANLLSMAVSYAEARGAE 117
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQDI 187
I IG D++GYPDCR A + ++ G E+ + + P + K E + ++
Sbjct: 118 AIYIGAHSEDFAGYPDCRPAFFEAFQGVVDTGTKPETEIGIEAPYVEYSKTEIAERGLEL 177
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G + E + +CY + C +C +C R++ + +
Sbjct: 178 G------VPYEHTWSCYRNEAP-------ACGTCDSCTYRREAFERAGSE 214
>gi|307545034|ref|YP_003897513.1| queuosine biosynthesis protein QueC [Halomonas elongata DSM 2581]
gi|307217058|emb|CBV42328.1| K06920 queuosine biosynthesis protein QueC [Halomonas elongata DSM
2581]
Length = 257
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 21/233 (9%)
Query: 3 DIIKKAPSA---LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
+ +AP++ ++++SGG DS T L AL V LSFDYGQR+ EL+ V +
Sbjct: 18 PTMSQAPASSATVVIYSGGMDSFTVLHRALGEGRDVHALSFDYGQRHSRELDVARRVCRD 77
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ E+ + D ++ + L D + +NL +T VP RN++ L A
Sbjct: 78 L-EVPHQVVDIRAIHGLIDNSALTD----AERVMPDGDYDADNLADTVVPNRNMMLLSMA 132
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A +G + G D+ YPDCR + + A+ + V +HTP + K +
Sbjct: 133 IAKAVNIGAGRVDYGAHGGDHVLYPDCRPEFVEAMNAVAGIANFEPVEIHTPYLRHTKAD 192
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G L ++ TCYLG+ C C +C R +
Sbjct: 193 ILADGLSMG------LDYADTWTCYLGES-------LACGRCGSCRERLAAFA 232
>gi|189499746|ref|YP_001959216.1| exsB protein [Chlorobium phaeobacteroides BS1]
gi|254764321|sp|B3ENV8|QUEC_CHLPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189495187|gb|ACE03735.1| exsB protein [Chlorobium phaeobacteroides BS1]
Length = 226
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A++L SGG DS + A + + +YGQR + EL +
Sbjct: 2 RAVVLISGGMDSLVVAAQARALGYELAAMHVNYGQRTWQKELTAFRRICSHYA------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATLA 123
+ + A L I SSLT + ++ ++ + +P+++VP RN FL A + +
Sbjct: 55 --IERKLEVDAAYLEHIGGSSLT-DSSIPVEQADLQTVAIPSSYVPFRNASFLSMAVSWS 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETW 181
+G I IG E D SGYPDCR A I LG E+ + + TPL+ L+K E
Sbjct: 112 EVIGAERIFIGAVEEDSSGYPDCRKIFYDAFNKVIELGTKPETTIEIRTPLIDLQKSEIV 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ ++ ++ S +CY + G C C +C R + +
Sbjct: 172 RKGVEL------DVPFFHSWSCYKSE-------GKACGLCDSCARRLRAFQ 209
>gi|221633771|ref|YP_002522997.1| exsB protein [Thermomicrobium roseum DSM 5159]
gi|221157005|gb|ACM06132.1| exsB protein [Thermomicrobium roseum DSM 5159]
Length = 226
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 30/240 (12%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K++ A++L SGG DS+T + LSF YGQR++ ELE + +K+
Sbjct: 2 EPRKRSQRAVVLLSGGLDSTTLAYLLDAYGFVLYGLSFRYGQRHERELEAARAIAEKLR- 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-DNNLPNTFVPGRNIIFLVFAAT 121
+H + L SSL + + Q + +P+T+VP RN++FL A
Sbjct: 61 ---------FAEHRVVTIDLAQWGGSSLVGSGEIPRQPTSGIPSTYVPVRNLVFLAIAHA 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWL 175
A + + I V + DYSGYPDCR + + A + A +L + V P + +
Sbjct: 112 YAEAIDADAVAIAVSQVDYSGYPDCRGEFLAAYQQAADLASRRFVETGRRIPVLAPFLDV 171
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K +L +G + E+ +CY G C C +C LR + + E
Sbjct: 172 PKSAIVRLGLRLG------VDYAETWSCYRGGERP-------CQECDSCRLRAQAFAEAG 218
>gi|313126239|ref|YP_004036509.1| preq(0) biosynthesis protein quec [Halogeometricum borinquense DSM
11551]
gi|312292604|gb|ADQ67064.1| preQ(0) biosynthesis protein QueC [Halogeometricum borinquense DSM
11551]
Length = 236
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 30/244 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKK 59
M D +A++L SGG DS+T A R + L YGQ+ + E +C + +
Sbjct: 1 MTDS-DDRQTAVVLLSGGMDSATTAYEAKARGYDLYCLHTSYGQKTETKEYDCATQLAE- 58
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIF 115
EL + + DH L DI SSLT + + +P ++VP RN
Sbjct: 59 --ELDAEEFLHIETDH------LSDIGASSLTDDEIDVEDADMDAEEIPTSYVPFRNANL 110
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLM 173
L A + A + +G DY+GYPDCR + A E ++ G E+++ + P +
Sbjct: 111 LSMAVSFAEANDCDAVFVGAHSEDYAGYPDCRPEFFEAFEAMVDTGTKPETNIDIEVPFV 170
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + + +++ ++ E + +CY + C +C +C R + +
Sbjct: 171 TDSKTDIAQRGREL------DVPFEHTWSCYRAEEP-------ACGTCDSCAYRLQAFRN 217
Query: 234 FKEK 237
+
Sbjct: 218 VGMR 221
>gi|37522606|ref|NP_925983.1| hypothetical protein gll3037 [Gloeobacter violaceus PCC 7421]
gi|81707945|sp|Q7NCE2|QUEC_GLOVI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|35213607|dbj|BAC90978.1| gll3037 [Gloeobacter violaceus PCC 7421]
Length = 234
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 124/234 (52%), Gaps = 23/234 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV----ELM 64
AL++FSGGQDS+TC + A +D V ++F+Y QR+ +ELE V + + E +
Sbjct: 2 KKALVVFSGGQDSTTCAALACREYDEVHAVTFEYNQRHAIELESARAVGQALGLTGHEFI 61
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
G ++ A LG + ++ + TFVPGRNI+FL AA A+
Sbjct: 62 RLGPLLKGTSPLVSDAPLGQYASAAELPA--------GVEPTFVPGRNILFLTLAANRAF 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH---VTVHTPLMWLKKYETW 181
LG +IVIGVCE D++GY DCR + A+ A+ G+ + +HTPLM L K ET
Sbjct: 114 CLGTGDIVIGVCEADFAGYWDCRQVFVEAMARALGEGIYGDANAIRIHTPLMRLTKAETV 173
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
KL+ ++ G+ + L SHTCY G R GC C AC LR +G+ E
Sbjct: 174 KLSVEVLGERFEEV-LALSHTCYAGVRG-------GCGRCHACILRDRGFREAG 219
>gi|116074186|ref|ZP_01471448.1| ExsB [Synechococcus sp. RS9916]
gi|116069491|gb|EAU75243.1| ExsB [Synechococcus sp. RS9916]
Length = 228
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + AL+ RV LSFDYGQR++ EL+ + +
Sbjct: 8 TAIALLSGGLDSATAAALALEAGHRVIGLSFDYGQRHRRELDAAAALANTL--------- 58
Query: 70 SLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L E H + LA G S + + + +++ +P+T+VPGRN +F+ +LA
Sbjct: 59 GLAEHHTIAVNLASWGGSSLTDTQQEIPTDGVEEGVIPSTYVPGRNTVFISIGLSLAEAR 118
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G IV+GV DYSGYPDCR D + A +T +L + H P +W TW
Sbjct: 119 GADRIVLGVNAVDYSGYPDCRPDYLAAFQTLADLSSKVGREGHGPQLWAPLV-TWSKQTI 177
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + + ++++ +CY G C C +C +R
Sbjct: 178 VEEALRLQVPIDQTWSCYSGGAQP-------CGVCDSCRIRDDALRAAG 219
>gi|330721754|gb|EGG99746.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC2047]
Length = 203
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 27 WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDIS 86
A +SF+YGQR EL + K + + E ++ + +G I
Sbjct: 1 MAKASGADCYAISFNYGQRCNAELAAAERIVKSM---------GVIEHQVINID-MGKIG 50
Query: 87 HSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYP 144
S+LT + + + +P T+VP RN +FL FA A +G I IGV DYSGYP
Sbjct: 51 GSALTDDSIDVPEDEPEGIPVTYVPARNTVFLSFALGWAEVIGAQEIYIGVSAVDYSGYP 110
Query: 145 DCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEE 199
DCR + I A E NL ++ + + TPLM L K ET + +G +
Sbjct: 111 DCRPEFIEAFEAMANLATKAGVEGESIKIQTPLMHLSKAETVQAGIQLG------VDYSL 164
Query: 200 SHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +CY D G C C +C LR KG+ +
Sbjct: 165 TVSCYQADDD-----GKACGKCDSCRLRIKGFEDAG 195
>gi|21672728|ref|NP_660795.1| hypothetical protein BUsg463 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091577|sp|Q8K986|QUEC_BUCAP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|21623372|gb|AAM68006.1| hypothetical 25.5 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 232
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 22/233 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L++FSGGQDS+TCL + + + ++FDY Q +K E++ +
Sbjct: 2 KKILIIFSGGQDSTTCLIHYTNIYKEIYCITFDYNQLHKSEIDSARFISNYF-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ + + L L ++S SSLT + + +LP+TFVPGRNI+FL ++ A+
Sbjct: 54 -NVKKHIFVDLKCLKNLSISSLTDEKISILDNHPLNFSLPSTFVPGRNILFLTLSSIYAF 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
I +IV+GV E D+SGYPDCR+ ++ + + +GM + +PL+ L K E W L+
Sbjct: 113 NHQINSIVLGVNEIDFSGYPDCRNAFLKKMNDVVQIGMNCKINFQSPLINLSKAEIWALS 172
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ IL + TCY G + G GC C +C LR G+ ++K
Sbjct: 173 D---YWNSTQFILNNTVTCYQGIQ------GKGCGQCQSCILRNDGFNKWKSN 216
>gi|291522440|emb|CBK80733.1| preQ(0) biosynthesis protein QueC [Coprococcus catus GD/7]
Length = 225
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 96/232 (41%), Gaps = 26/232 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGG DS+TCL A+D++ D V L+ YGQR+ E+E K +
Sbjct: 2 KALVLSSGGVDSTTCLGLAVDKYGSDNVIALAITYGQRHTKEIEAA----KAVAAYYHVE 57
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATL 122
L I + +SHS ++ D +T+VP RN +FL AA++
Sbjct: 58 MLHLDLTPIFQYSDCSLLSHSDQAIPEESYAEQLQHSDGKPVSTYVPFRNGLFLSSAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A G I G D +G YPDC A+ AI G + V P + L K +
Sbjct: 118 ALSKGCDVIYYGAHSDDAAGNAYPDCSEVFKNAMNQAIYEGSGHQLKVEAPFVNLTKADV 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K ++ N+ E + +CY G C C C R K +
Sbjct: 178 VKKGLEL------NVPYELTWSCYEGGEKP-------CGKCGTCIDRAKAFA 216
>gi|94971670|ref|YP_593718.1| ExsB [Candidatus Koribacter versatilis Ellin345]
gi|94553720|gb|ABF43644.1| ExsB [Candidatus Koribacter versatilis Ellin345]
Length = 257
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 31/236 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
A+++ SGG DS+ C + A+ + + + L YGQR E + V +++
Sbjct: 30 KAVVVLSGGMDSTVCATLAVREYGAENIGALHVSYGQRTAAREKQAFAAVAERL------ 83
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-----NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + I S+LT A ++ + +P T+VP RN L A +
Sbjct: 84 ---GIQTRLAVETPFFRAIGGSALTDANIAVPDAGELIGHEIPVTYVPFRNAHLLAMAVS 140
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWLKKYET 180
A LG + I IG D SGYPDCR + A A+ G + + V TPL+ L+K+E
Sbjct: 141 WAEVLGASKIYIGAVAQDSSGYPDCRPEFYEAYNLAVRRGTKAGDIEVVTPLIALRKHEI 200
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
L ++G + + +CY + C C +C LR + +
Sbjct: 201 VSLGLELGA------PFDLTWSCYSRED-------CACGVCDSCVLRLRAFEGAGA 243
>gi|260880908|ref|ZP_05403120.2| ExsB protein [Mitsuokella multacida DSM 20544]
gi|260849899|gb|EEX69906.1| ExsB protein [Mitsuokella multacida DSM 20544]
Length = 210
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 33/221 (14%)
Query: 25 LSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGD 84
++ A + V +SF+Y QR+ +ELE + + H++ +
Sbjct: 1 MAVAKSKGYDVYPISFNYHQRHSIELEGAKKIA----------SYYGVKKHLIIETNMEA 50
Query: 85 ISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDY 140
I S+LT + +++P T+VP RN+IFL +A A LG T++ IGV DY
Sbjct: 51 IGGSALTDEKIEVPEGDVNRHSVPPTYVPARNLIFLSYAMGYAEVLGATHVYIGVNSVDY 110
Query: 141 SGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
SGYPDCR + I + + +T+ TPL L K + L +G
Sbjct: 111 SGYPDCRPEFIEKFQALADYATTATAVKGQKITIETPLQDLSKKDIVLLGTKLGA----- 165
Query: 195 LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +H+CY G C C +C LR +G+ E
Sbjct: 166 -PFQFTHSCYKGGEK-------ACGICDSCKLRLRGFAEAG 198
>gi|257463608|ref|ZP_05627999.1| queuosine biosynthesis protein QueC [Fusobacterium sp. D12]
gi|317061162|ref|ZP_07925647.1| succinoglycan biosynthesis regulator [Fusobacterium sp. D12]
gi|313686838|gb|EFS23673.1| succinoglycan biosynthesis regulator [Fusobacterium sp. D12]
Length = 231
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRK----KIVEL 63
L+L SGG DS+TCL+ A++++ +V LS YGQ++ EL+ + +++EL
Sbjct: 2 KVLVLLSGGIDSTTCLAMAIEKYGVGQVVALSAFYGQKHNKELQAARNIANYYRVELIEL 61
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +L + +I H S + +A + + +T++P RN +FL AA++A
Sbjct: 62 NLSKIFAYSNSSLLKHSG-KEIPHCSYVEQLAERKEKTL--STYIPFRNGLFLSTAASIA 118
Query: 124 YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ I G D +G YPDC A+ TAI G V V P + L K E
Sbjct: 119 ISKNCSIIFYGAHSDDAAGNAYPDCSPAFHEAMNTAIYEGSGRQVRVEAPFLKLHKKEIV 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL D+ L E + +CY G Y C C C R+K + E
Sbjct: 179 KLGLDL------KLPYELTWSCYEGGE-------YPCGQCGTCIDREKAFEE 217
>gi|283778827|ref|YP_003369582.1| exsB protein [Pirellula staleyi DSM 6068]
gi|283437280|gb|ADB15722.1| exsB protein [Pirellula staleyi DSM 6068]
Length = 229
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 89/226 (39%), Gaps = 18/226 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ +FSGG DS+ L D V LS DYGQR++ EL KK
Sbjct: 2 KTVAIFSGGLDSTVLAHELLAAGDEVLLLSIDYGQRHRKELVFAENFAKK-----QGLVW 56
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L + + + G+ SS + N+ T VP RN+I L A A
Sbjct: 57 KLADLKSIAGLLGGNSQTSSAVAVPHGHYAEENMKLTVVPNRNMIMLAVAGGWAVSEKAD 116
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G D++ YPDCR + +RA+ A+ L + + TP + K + + ++G
Sbjct: 117 RLAYGAHAGDHTIYPDCRPEFVRAMAAALELCDWHKLAMFTPFVSRSKADIVRRGAELG- 175
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +CY G C C CY R++ +
Sbjct: 176 -----VDFAATWSCYEGGE-------IHCGQCGTCYERREAFERAG 209
>gi|218961226|ref|YP_001741001.1| exsB protein [Candidatus Cloacamonas acidaminovorans]
gi|167729883|emb|CAO80795.1| exsB protein [Candidatus Cloacamonas acidaminovorans]
Length = 222
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 29/230 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWK 68
A++L SGG DS + A+ D V L F+YGQ + EL + +
Sbjct: 3 RAIVLLSGGMDSLVTAACAVSECDEVCFLHFNYGQLTEKKELSSFEALVNYYQPIQA--- 59
Query: 69 DSLGEDHILPLAILGDISHSSLTK-NVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ + L +I S+LT N+ ++ + + +P T+VP RN IFL A A
Sbjct: 60 ------KVINYSWLSEIGGSALTDRNIPVQKGILSSSKIPVTYVPFRNAIFLCSAVAWAE 113
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWK 182
+ T I IG E D SGYPDCR +A I G + + + TP++ K E +
Sbjct: 114 VIQATRIYIGAVEEDSSGYPDCREVFFQAFNKVIATGTKGEIPIEISTPVLHKSKAEIVQ 173
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L ++ E S +CY E C C +C LR+K +
Sbjct: 174 LGIELKA------PFELSWSCY-------TENDVACGVCESCLLRKKAFK 210
>gi|167757165|ref|ZP_02429292.1| hypothetical protein CLORAM_02715 [Clostridium ramosum DSM 1402]
gi|237735747|ref|ZP_04566228.1| succinoglycan biosynthesis regulator [Mollicutes bacterium D7]
gi|167703340|gb|EDS17919.1| hypothetical protein CLORAM_02715 [Clostridium ramosum DSM 1402]
gi|229381492|gb|EEO31583.1| succinoglycan biosynthesis regulator [Coprobacillus sp. D7]
Length = 227
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/237 (27%), Positives = 100/237 (42%), Gaps = 26/237 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+LFSGG DS+T L+ A+ D V LS YGQ++ E+E V KI +
Sbjct: 2 KVLVLFSGGVDSTTALALAIQEHGKDNVVALSISYGQKHTKEIE----VANKIAQFYQVE 57
Query: 68 KDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L I + + HS + N + D N +T+VP RN +FL AA++
Sbjct: 58 HLYLDLAKIFTYSNCSLLQHSDNEIPHESYNEQLNKTDGNPVSTYVPFRNGLFLSSAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A G I G D +G YPDC A+ AI G + + P + + K +
Sbjct: 118 ALSKGCNIIYYGAHSDDAAGSAYPDCSKVFNNAMNQAIYEGSGHQLEIKAPFVEMTKADI 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
K+ +G + + + +CY G C +C C RQ +++ K
Sbjct: 178 VKIGLSLG------VPYQLTWSCYEGNDTP-------CGTCGTCIDRQNAFLKNGIK 221
>gi|11498054|ref|NP_069278.1| succinoglycan biosynthesis regulator (exsB) [Archaeoglobus fulgidus
DSM 4304]
gi|74514120|sp|O29807|QUEC_ARCFU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|2650185|gb|AAB90792.1| succinoglycan biosynthesis regulator (exsB) [Archaeoglobus fulgidus
DSM 4304]
Length = 239
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DSST L + LD V L+F YGQ++ E+E V K
Sbjct: 2 KAVMLLSGGIDSSTLLYYLLDGGYEVHALTFFYGQKHSKEIESAEKVAKAAK-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + D IS+ +LT + + T VP RN+I L AA A +
Sbjct: 54 --VRHLKVDISTIHDLISYGALTGEEEVPKAFYSEEVQRRTIVPNRNMILLSIAAGYAVK 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKLA 184
+G + +DYS YPDCR + ++A++TA+ L + V V P + + K + +L
Sbjct: 112 IGAKEVHYAAHLSDYSIYPDCRKEFVKALDTAVYLANIWTPVEVRAPFVDMTKADIVRLG 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + E + +CY G C SC C R + +
Sbjct: 172 LKLG------VPYELTWSCYEGGDRP-------CLSCGTCLERTEAF 205
>gi|110597996|ref|ZP_01386277.1| ExsB [Chlorobium ferrooxidans DSM 13031]
gi|110340445|gb|EAT58934.1| ExsB [Chlorobium ferrooxidans DSM 13031]
Length = 226
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A++L SGG DS + A + + + +YGQR EL +
Sbjct: 2 RAVVLLSGGMDSLVTTAMAHEHGFELAAMHVNYGQRTWHKELASFRDICNHY-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTK----NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ + L I SSLT +Q + +P ++VP RN FL A + +
Sbjct: 54 -NIDRRLEVDADFLARIGGSSLTDLSMPVSGADLQGSEIPTSYVPFRNANFLSMAVSWSE 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
+G I IG E D SGYPDCR A I LG E+ + + TPL+ ++K +
Sbjct: 113 VIGANRIFIGAVEEDSSGYPDCRKIFYEAFNQVIALGTKPETTIEIVTPLIEMQKSDIVH 172
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L+++ S +CY + G C C +C R + +
Sbjct: 173 RGM------LLDVPFAYSWSCYKSE-------GRACGVCDSCARRLRAFE 209
>gi|118574280|sp|Q1IHK6|QUEC_ACIBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 237
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 31/245 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNK-VELECRLCVR 57
M A+++ SGG DS+ C + A+ + + + L YGQR E + V
Sbjct: 1 MKVQRGDTGKAVVVLSGGMDSTVCATLAVREYGAENIGALHVSYGQRTAAREKQAFAAVA 60
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK-----NVAMKIQDNNLPNTFVPGRN 112
+++ + + I S+LT A ++ + +P T+VP RN
Sbjct: 61 ERL---------GIQTRLAVETPFFRAIGGSALTDANIAVPDAGELIGHEIPVTYVPFRN 111
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTP 171
L A + A LG + I IG D SGYPDCR + A A+ G + + V TP
Sbjct: 112 AHLLAMAVSWAEVLGASKIYIGAVAQDSSGYPDCRPEFYEAYNLAVRRGTKAGDIEVVTP 171
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ L+K+E L ++G + + +CY + C C +C LR + +
Sbjct: 172 LIALRKHEIVSLGLELGA------PFDLTWSCYSRED-------CACGVCDSCVLRLRAF 218
Query: 232 MEFKE 236
Sbjct: 219 EGAGA 223
>gi|330959275|gb|EGH59535.1| exsB protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 187
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+++ A++L SGG DS+T ++ A T+SFDYGQR++ EL+ V + +
Sbjct: 1 MSELTMTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E ++ L + G I S+LT + + +P T+VP RN +FL
Sbjct: 61 GAV---------EHKVIGLNLNG-IGGSALTDSSIAVPEAPSEGIPVTYVPARNTVFLSL 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
A A LG +I IGV DYSGYPDCR + + + E NL ++ V + PL
Sbjct: 111 ALGWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERTANLATKAGVEGQGFTIRAPLQ 170
Query: 174 WLKKYETWKLAQDIGGQ 190
L K + K +G
Sbjct: 171 NLSKSDIVKAGAALGVD 187
>gi|193215202|ref|YP_001996401.1| exsB protein [Chloroherpeton thalassium ATCC 35110]
gi|254764322|sp|B3QS09|QUEC_CHLT3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|193088679|gb|ACF13954.1| exsB protein [Chloroherpeton thalassium ATCC 35110]
Length = 226
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 96/234 (41%), Gaps = 27/234 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS + A + L +YGQR + L +KI +
Sbjct: 2 RAVVLLSGGMDSLVTTAIAAHLGYELAALHINYGQRTEK---RELVAFQKICDFY----- 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + L I SSLT K+ +P ++V RN L A + A
Sbjct: 54 RIERRLEINFEHLSLIGGSSLTDLAMPVTTAKLHSKEIPTSYVAFRNANMLSVAVSWAEV 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
+G I IG + D SGYPDCR + +A I G ++ + + TP++ LKK+E
Sbjct: 114 IGANKIFIGAVDEDSSGYPDCRVNFFQAFNELIKHGTKPDTRIEIQTPVISLKKWEIVIK 173
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++ + E S +CY + C C +C LR + + + +
Sbjct: 174 GMEL------EVPFEHSWSCYKSEH-------VACGVCDSCALRLRAFEQAGIR 214
>gi|196230867|ref|ZP_03129728.1| exsB protein [Chthoniobacter flavus Ellin428]
gi|196225208|gb|EDY19717.1| exsB protein [Chthoniobacter flavus Ellin428]
Length = 232
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 28/231 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++L SGG DS L V LSFDYG ++ K + L
Sbjct: 2 SRSKVVVLVSGGMDSVAALYHTQAEHPVVGALSFDYGSKHN----------HKEIPLAAY 51
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ LG H ++PL+ + ++ S L ++ ++ + T VP RN I L A
Sbjct: 52 HCERLGVPHRVIPLSFINELFASDLLQSGGAIPDGHYEELTMKQTVVPFRNGIMLSIAGG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A +G ++I D++ YPDCR ++A+ AI LG + + + P + K +
Sbjct: 112 YAESVGAQGLIIAAHAGDHAIYPDCREAFMQAMGEAIRLGTYAEIQLLRPFIHFSKAQIA 171
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++G + ++ +CY G+ C +C C R++ +
Sbjct: 172 ARGHELG------VDFAKTWSCYKGQE-------IHCGTCGTCVERREAFA 209
>gi|325283488|ref|YP_004256029.1| exsB protein [Deinococcus proteolyticus MRP]
gi|324315297|gb|ADY26412.1| exsB protein [Deinococcus proteolyticus MRP]
Length = 233
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 35/244 (14%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + P A++L SGG DSST L A+ LSF YGQR+ VELE +
Sbjct: 1 MTETT--NPRAVVLLSGGLDSSTVLGLAVRSGLEATALSFRYGQRHTVELERAAQIAAHF 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFL 116
G H + +G S+LT D +P T+VPGRN +F+
Sbjct: 59 -----------GAAHRVVDINIGSFGGSALTDEGLAVPQEATPDGVIPPTYVPGRNTVFI 107
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTP 171
+LA + ++ +G+ DYSGYPDCR D + A +T +L + P
Sbjct: 108 AVGLSLAEAIDAGSLHLGITAVDYSGYPDCRPDYLAAYQTLADLATVAGREGRGARLVAP 167
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ + K + + A ++G + + + +CY G + C C +C +R +
Sbjct: 168 LLEMSKVDIVRTALEVG------VPVHLTWSCYSGGSEP-------CGLCDSCRIRDEAL 214
Query: 232 MEFK 235
+
Sbjct: 215 LSAG 218
>gi|124516512|gb|EAY58020.1| ExsB protein [Leptospirillum rubarum]
gi|206603411|gb|EDZ39891.1| ExsB protein [Leptospirillum sp. Group II '5-way CG']
Length = 241
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 67/235 (28%), Positives = 97/235 (41%), Gaps = 27/235 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+++L SGG DS+ + A+ RV L YG R + E + W
Sbjct: 17 KGSVVLVSGGMDSAVTAAMAIRESPRVAFLHVRYGARAQDSEERA------FRNIARHWG 70
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ LA LG + S+LT A +P+T+VP RN FL A +
Sbjct: 71 --VDRVQVIDLAPLGALGGSALTDRSMEVPAANPDAPGIPSTYVPFRNAHFLAIATSWCE 128
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
L I IG E D SGYPDCR A E AI LG + + + TP++ L K E
Sbjct: 129 VLKFDRIWIGAVEEDSSGYPDCRRIFYDAFEEAIRLGTRPGTGIRIMTPVIHLNKGEIVS 188
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + E + +CY E C C +C LR +G+ +
Sbjct: 189 EGVRLG------VPFEHTWSCYR-------EGTRACGRCDSCALRLRGFSRAGIR 230
>gi|325914191|ref|ZP_08176544.1| preQ(0) biosynthesis protein QueC;transcriptional regulator
[Xanthomonas vesicatoria ATCC 35937]
gi|325539694|gb|EGD11337.1| preQ(0) biosynthesis protein QueC;transcriptional regulator
[Xanthomonas vesicatoria ATCC 35937]
Length = 213
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 27/225 (12%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
DS+ ++ A ++ V LS YGQR+ EL+ + ++
Sbjct: 1 MDSAAVIALAQEQGFAVYALSVRYGQRHTSELD---------AAARVAAAQGVAAHKVVD 51
Query: 79 LAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
+ L I S+LT ++ + + +P T+VP RN I L A A +G ++ GV
Sbjct: 52 VD-LRSIGGSALTDDIEVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVGANDLFCGVNA 110
Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKLAQDIGGQDL 192
DYSGYPDCR + +RA E NL ++ V VH PL +L K + + +G
Sbjct: 111 VDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVREGVRLG---- 166
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + +CY D G C C AC LR G+ + +
Sbjct: 167 --VDFGLTVSCYRADVD-----GRACGHCDACRLRAAGFADAGVQ 204
>gi|327312420|ref|YP_004327857.1| queuosine biosynthesis protein QueC [Prevotella denticola F0289]
gi|326944366|gb|AEA20251.1| queuosine biosynthesis protein QueC [Prevotella denticola F0289]
Length = 230
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKK 59
+ + + ++++ SGG DS T L DR + + +SFDYGQ + K
Sbjct: 6 LQEKTDQMKDSVIIVSGGLDSITLLY---DRAETIALAVSFDYGQNHGA----------K 52
Query: 60 IVELMPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNII 114
+ LG HI +PL+ + SSL + N+ +T VP RN I
Sbjct: 53 ELPFAAHHCRKLGIPHITIPLSFMHRFFKSSLLDGAEAIPEGHYAEENMKSTVVPFRNGI 112
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
L A +A G+ + I D++ YPDCR D I+A++ A G +V + P
Sbjct: 113 MLAIATGIAESHGLRRVYIANHGGDHTIYPDCRPDFIQAMDGAATAGTFVNVRIEAPYTN 172
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ K + + +G + ++ +CY G C C C R++ ++E
Sbjct: 173 ITKADIVRRGTALG------VDYSKTWSCYKGSD-------VHCGKCGTCVERKEAFLEA 219
Query: 235 KEK 237
K
Sbjct: 220 GVK 222
>gi|326389108|ref|ZP_08210689.1| ExsB [Novosphingobium nitrogenifigens DSM 19370]
gi|326206414|gb|EGD57250.1| ExsB [Novosphingobium nitrogenifigens DSM 19370]
Length = 214
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 23 TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAIL 82
C A ++ V L+FDY QR++VEL+ V ++ E H++ L
Sbjct: 2 VCAGLAREQGFEVLALTFDYNQRHRVELDASRKVAARVG----------VERHVILPLDL 51
Query: 83 GDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDY 140
S+LT ++A+ +P T+VP RN++FL A A G ++I IGV DY
Sbjct: 52 RQFGGSALTDDIAVPKDGVGEEIPVTYVPARNLVFLSLALAWAEAAGSSDIFIGVNALDY 111
Query: 141 SGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNL 195
SGYPDCR + I E + + +V +H PL +LKK + + A +G +
Sbjct: 112 SGYPDCRPEFIGGFEALARVATKFGDKGGNVKIHAPLQYLKKADIAREAVRLGLETG--- 168
Query: 196 ILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
ES +CY D G C C +C LR+ G+ E +
Sbjct: 169 ---ESWSCYDPLPD-----GRACGLCDSCRLRRAGFKEAGIE 202
>gi|317054937|ref|YP_004103404.1| exsB protein [Ruminococcus albus 7]
gi|315447206|gb|ADU20770.1| exsB protein [Ruminococcus albus 7]
Length = 228
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGG DS+TCL+ A+ + + V LS YGQ++ E++ V + +
Sbjct: 2 KALVLFSGGLDSATCLALAIKKHGKENVTALSVFYGQKHDKEIQAAKNVAEYYGVTLKTL 61
Query: 68 KDSL---GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L D L DI H S + ++ D +T+VP RN +FL AA++A
Sbjct: 62 DLALIFADSDCSLLSNSDKDIPHESYAEQLS--HTDGKPVSTYVPFRNGLFLASAASIAI 119
Query: 125 RLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
L I G D +G YPDC A+ +AI +G V + P + L K + K
Sbjct: 120 SLDCGVIYYGAHADDAAGNAYPDCSQAFNNAMNSAITIGSGEQVHIEAPFVGLTKADVVK 179
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ ++G + E + +CY G C C C R +
Sbjct: 180 MGTELG------VPYELTWSCYEGGEKP-------CGVCGTCIDRTAAFE 216
>gi|88859839|ref|ZP_01134478.1| putative regulator protein [Pseudoalteromonas tunicata D2]
gi|88817833|gb|EAR27649.1| putative regulator protein [Pseudoalteromonas tunicata D2]
Length = 207
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
DS T L+ A+ V LSFDYGQR+ EL+ V + + I+
Sbjct: 1 MDSFTVLNKAISEGHEVYALSFDYGQRHVKELKVAAQVCQALN----------VPHKIVD 50
Query: 79 LAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
++ + I SSLT ++ + Q+ ++ +T VP RN+I L A A L + + G
Sbjct: 51 ISAINQLIGGSSLTDDIDVPEGHYQEESMKSTIVPNRNMILLSLAVGYAVSLKASQVYYG 110
Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
D++ YPDCR + ++ + + V + +P + K + +G
Sbjct: 111 AHSGDHAIYPDCRPEFVQKMSDVCKIANYDAVEIVSPYLNNTKIDILTDGLKMG------ 164
Query: 195 LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L + TCY G+ C C AC R + +
Sbjct: 165 LDYSHTWTCYNGREK-------ACGKCGACQERLEAFR 195
>gi|88809457|ref|ZP_01124965.1| ExsB [Synechococcus sp. WH 7805]
gi|88786676|gb|EAR17835.1| ExsB [Synechococcus sp. WH 7805]
Length = 229
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 22/238 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ + +A+ L SGG DS+T + A RV LSFDYGQR++ EL+ + +
Sbjct: 1 MSSMTDT--TAIALLSGGLDSATAAALAKAAGCRVIGLSFDYGQRHRRELQAAKEIALAL 58
Query: 61 VELMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLV 117
+L E H + LA G S + T ++ +Q++ +P+T+VPGRN +F+
Sbjct: 59 ---------NLLEHHTISVNLASWGGSSLTDTTLSLPTDGVQEDAIPSTYVPGRNTVFIS 109
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
+LA G +V+G+ DYSGYPDCR D +RA +T NL + P +W
Sbjct: 110 IGLSLAEARGAEQVVLGINAVDYSGYPDCRPDYLRAFQTLANLSSKVGREGRGPRLWAPL 169
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E W + + + + +E + +CY G C C +C +R
Sbjct: 170 VE-WSKQRIVEEALRLGVPIESTWSCYSGGA-------VPCGRCDSCRIRDAALSAAG 219
>gi|322434471|ref|YP_004216683.1| exsB protein [Acidobacterium sp. MP5ACTX9]
gi|321162198|gb|ADW67903.1| exsB protein [Acidobacterium sp. MP5ACTX9]
Length = 231
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 100/238 (42%), Gaps = 32/238 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKI-------- 60
A+L SGG DS C + A R + + F YGQR + EL + K +
Sbjct: 3 KAVLCLSGGMDSCVCAALA-ARDHELYAVHFSYGQRTEARELRSAEAIAKLVGAKDFLHL 61
Query: 61 -VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+EL + S D + + ++ + + +P T+VP RN FL A
Sbjct: 62 KIELFRRIGGSALTDRSIAVPD-------AVAEEAMHGRTGDEVPVTYVPFRNAHFLSAA 114
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKY 178
+ A LG + IG E D SGYPDCR A I G E + V TPL+ ++K
Sbjct: 115 VSWAEVLGAKVVTIGAVEQDSSGYPDCRPAYYDAFNELIRQGTKEGEIRVETPLIRMRKN 174
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
E +L ++G L S +CY G+ + C C +C LR + + E
Sbjct: 175 EIVRLGVELGA------PLHVSWSCYSGEDE-------ACGVCESCALRLRAFREAGA 219
>gi|197303439|ref|ZP_03168478.1| hypothetical protein RUMLAC_02161 [Ruminococcus lactaris ATCC
29176]
gi|197297437|gb|EDY31998.1| hypothetical protein RUMLAC_02161 [Ruminococcus lactaris ATCC
29176]
Length = 227
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 39/239 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGG DS+T L+ A+ R+ D V LS YGQ++ E++ V
Sbjct: 2 KALVLSSGGVDSTTALALAVSRYGKDNVIALSVSYGQKHDKEIQAAKAVS---------- 51
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------------NTFVPGRNIIF 115
E L L+ + S+ SL + +I + + +T+VP RN +F
Sbjct: 52 AFYGVEQLFLDLSKIFQYSNCSLLQQSTEEIPEESYAKQIEKTEGEKPVSTYVPFRNGLF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
L AA++A + I+ G D +G YPDC A+ AI G + V P +
Sbjct: 112 LSSAASIALSKDCSVILYGAHADDSAGFAYPDCSPVFNDAMNQAIFEGSGHQLKVEAPFV 171
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K E K+ ++ N E + +CY GK + C C C R +
Sbjct: 172 NMTKAEVVKMGLEL------NAPYELTWSCYEGKDEP-------CGKCGTCIDRAAAFA 217
>gi|206603341|gb|EDZ39821.1| ExsB protein [Leptospirillum sp. Group II '5-way CG']
Length = 241
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 27/235 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+++L SGG DS+ + A+ R+ L YG R + E + W
Sbjct: 17 KGSVVLVSGGMDSAVTAAMAIRESPRIAFLHVRYGARAQDSEERA------FRNIARHWG 70
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ ++ LA LG + S+LT A +P+T+VP RN FL A +
Sbjct: 71 --VDRVQVVDLAPLGVLGGSALTDRSMEVPAANPDAPGIPSTYVPFRNAHFLAIATSWCE 128
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
L I IG E D SGYPDCR A E AI LG + + + TP++ L K E
Sbjct: 129 VLKFDRIWIGAVEEDSSGYPDCRRIFYDAFEEAIRLGTRPGTGIRIMTPVIHLNKGEIVS 188
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + E + +CY E C C +C LR +G+ +
Sbjct: 189 EGIRLG------VPFEHTWSCYR-------EGTRACGRCDSCALRLRGFSRAGIR 230
>gi|92114160|ref|YP_574088.1| ExsB [Chromohalobacter salexigens DSM 3043]
gi|110816222|sp|Q1QVW9|QUEC_CHRSD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|91797250|gb|ABE59389.1| preQ(0) biosynthesis protein QueC [Chromohalobacter salexigens DSM
3043]
Length = 251
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 93/232 (40%), Gaps = 28/232 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A++++SGG DS T L AL V LSF YGQR+ ELE V +++
Sbjct: 26 EDTTKAVVIYSGGMDSYTVLHRALRAGFEVHALSFHYGQRHSRELETAHDVCQRLG---- 81
Query: 66 KWKDSLGEDHILPL-AILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + AI G I +S+LT +N+ T VP RN+I L A
Sbjct: 82 ------IAHQVVDIRAIHGLIGNSALTDATQTMPDGDYDADNMAATVVPNRNMILLSLAI 135
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A +G G D+ YPDCR + + + + + V + P + K E
Sbjct: 136 GHAVNIGANVCFYGAHGGDHVLYPDCRPEFVERMNDVAAIADFTPVRIAAPYLHASKEEI 195
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G L ++ TCYLG C C +C R +
Sbjct: 196 LADGLAMG------LDYAQTWTCYLGAE-------RSCGHCGSCRERLAAFA 234
>gi|303244970|ref|ZP_07331294.1| exsB protein [Methanothermococcus okinawensis IH1]
gi|302484681|gb|EFL47621.1| exsB protein [Methanothermococcus okinawensis IH1]
Length = 233
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 101/239 (42%), Gaps = 25/239 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS + A ++ ++FDYGQR + + KK+ E++
Sbjct: 2 KAVCILSGGLDSVVSMMVAKKETSKLYAITFDYGQRAVL---REINASKKVSEILG---- 54
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM-----------KIQDNNLPNTFVPGRNIIFLVF 118
+ ++ L + + S+S+LTK+ + + + + +VP RN+I
Sbjct: 55 --AQHKVIKLPFIKEFSNSALTKDKNIPTIKEHELDNIEKATETMKSVWVPARNMILFSI 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A+ A +G I G+ + + +PD + I + G + V + PL L K
Sbjct: 113 ASGFAEFIGADEIYTGLNREEGTTFPDNTKEFIDRFNNVLEYGTLNKVKMRAPLYNLNKT 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
E KL + + + + L+ S++CY E C C +C R++ + E
Sbjct: 173 EIVKLGKKLEKDLGLEV-LKYSYSCYR----DNGEDFLHCGKCESCMRRKRAFKEAGIN 226
>gi|78777268|ref|YP_393583.1| ExsB [Sulfurimonas denitrificans DSM 1251]
gi|110816276|sp|Q30RN3|QUEC_SULDN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|78497808|gb|ABB44348.1| ExsB [Sulfurimonas denitrificans DSM 1251]
Length = 224
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
K A+ + SGG DS+ + + L F+Y QR + EL C KKI E +
Sbjct: 4 KNKKAICIMSGGMDSTLGAYMVKEMGYEIVALHFNYAQRTEAKELFCF----KKICEAL- 58
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ ++L L I S+LT ++ + + +P T+VP RN IFL AA L
Sbjct: 59 ----NVSNSYVLDLDFFSKIGASALTDKSIDIPINGLEEGVPITYVPFRNGIFLSIAAAL 114
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
A + I IGV + D SGYPDC+ I ++E +INLG E+ + ++ PL+ L K +
Sbjct: 115 AEKEEAVLIAIGVVQEDSSGYPDCKDSFITSMEQSINLGTKDETKIKIYMPLVHLSKSQI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ A + N+ LE + +CY + C C +C LR G+
Sbjct: 175 VEHALRL------NVPLELTWSCYKDEEA-------ACGVCDSCRLRLNGFR 213
>gi|325678487|ref|ZP_08158102.1| protein ExsB [Ruminococcus albus 8]
gi|324109798|gb|EGC03999.1| protein ExsB [Ruminococcus albus 8]
Length = 228
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV---ELM 64
AL+LFSGG DSSTCL A+D++ D V LS YGQ++ E+ V + +
Sbjct: 2 KALVLFSGGLDSSTCLGLAVDKYGADNVLALSVYYGQKHDKEIRASEKVAAHYGVKQQTL 61
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
K G D L GDI S K ++ +T+VP RN +FL AA++A
Sbjct: 62 DLAKIFEGSDCTLLKGSDGDIPKESYAKQ--IEESAGKPVSTYVPFRNGLFLASAASIAL 119
Query: 125 RLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
G I G D +G YPDC + RA+ AI LG + + P + L K + +
Sbjct: 120 SNGCDVIYYGAHSDDAAGNAYPDCSENFNRAMNEAIYLGSGEQLRIEAPFVSLTKADVVR 179
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++G + E + +CY G C C C R +
Sbjct: 180 KGVELG------VPFELTWSCYEGGDKP-------CGICGTCRDRIAAFE 216
>gi|87123416|ref|ZP_01079267.1| ExsB [Synechococcus sp. RS9917]
gi|86169136|gb|EAQ70392.1| ExsB [Synechococcus sp. RS9917]
Length = 226
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 20/228 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ L SGG DS+T + A++ RV LSFDYGQR++ ELE + +
Sbjct: 6 AIALLSGGLDSATAAALAIEAGQRVIGLSFDYGQRHRRELEAARHLANSL---------G 56
Query: 71 LGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L E H L LA G S + + + ++ +Q +P+T+VPGRN +F+ +LA G
Sbjct: 57 LEEHHTLAVNLASWGGSSLTDRRQELPIEGVQQGVIPSTYVPGRNTVFIAIGLSLAETRG 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V+GV DYSGYPDCR D + A +T NL + + P +W E W + +
Sbjct: 117 ADQLVLGVNAVDYSGYPDCRPDYLAAFQTLANLSSRAGLEGRGPRLWAPLVE-WSKQRIV 175
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +E++ +CY G C C +C +R +
Sbjct: 176 EEALRLGVPIEQTWSCYSGGA-------VACGVCDSCRIRDEALRAAG 216
>gi|261403835|ref|YP_003248059.1| exsB protein [Methanocaldococcus vulcanius M7]
gi|261370828|gb|ACX73577.1| exsB protein [Methanocaldococcus vulcanius M7]
Length = 232
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 28/243 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A DR + ++F+YGQ+ ++ + KKI E++
Sbjct: 2 KAITVLSGGLDSTVATLIAKDRGYEMTAITFNYGQKA---VKREINSAKKICEILGI--- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD----------NNLPNTFVPGRNIIFLVFA 119
+ ++ L + SSL + + + +VP RN+I A
Sbjct: 56 ---KHIVVDLPFVKQFGKSSLITEKEIPTLKMNELDSEKAFDTMRAVWVPARNVIMFSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A LG I IG+ + + +PD + + A + G + V + PL K E
Sbjct: 113 SGFAESLGAEKIFIGINKEEGITFPDNTIEFVEAFNRVLEYGTLNKVKIEAPLYDKTKEE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFK 235
KL ++ + V + L+ S++CY E C C +C R++ ++ E K
Sbjct: 173 IVKLGAELEKKLGVEV-LKYSYSCY----HDNGEDFLHCGKCESCMRRKRAFLNAGVEDK 227
Query: 236 EKY 238
+Y
Sbjct: 228 TRY 230
>gi|15604537|ref|NP_221055.1| hypothetical protein RP694 [Rickettsia prowazekii str. Madrid E]
gi|81554792|sp|Q9ZCM9|QUEC_RICPR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|3861231|emb|CAA15131.1| unknown [Rickettsia prowazekii]
Length = 227
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 35/244 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ L SGG DS+T L+ A + + +SF+YGQRN EL +K+ EL+ K+
Sbjct: 2 KKSVNLLSGGTDSATVLAIASEMCYEIYAMSFNYGQRNNAEL-------RKVKELIKKY- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + I+ + L S+LT + + +P T+VP RN IFL +A
Sbjct: 54 -NVKQHKIVDID-LRAFGGSALTDDNIDVPYYHGINALPEIVPVTYVPARNTIFLSYAVG 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLK 176
A +G +I IGV +D + YPDC + I++ E +NL +T+H PL+ +
Sbjct: 112 FAEVIGSQDIFIGVHTSDSANYPDCCPEYIQSFEKMVNLATNMGVQGKKITIHAPLIDMT 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K + + +G + + + +CY D C +C AC +R + K
Sbjct: 172 KEQIIRTGLKLG------VDYKNTISCYSPTEDDLS-----CGNCLACIIRLDAFK--KN 218
Query: 237 KYQD 240
QD
Sbjct: 219 NIQD 222
>gi|292572327|gb|ADE30242.1| Trans-regulatory protein ExsB [Rickettsia prowazekii Rp22]
Length = 236
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 35/247 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ L SGG DS+T L+ A + + +SF+YGQRN EL +K+ EL+
Sbjct: 8 STMKKSVNLLSGGTDSATVLAIASEMCYEIYAMSFNYGQRNNAEL-------RKVKELIK 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVF 118
K+ ++ + I+ + L S+LT + + +P T+VP RN IFL +
Sbjct: 61 KY--NVKQHKIVDID-LRAFGGSALTDDNIDVPYYHGINALPEIVPVTYVPARNTIFLSY 117
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLM 173
A A +G +I IGV +D + YPDC + I++ E +NL +T+H PL+
Sbjct: 118 AVGFAEVIGSQDIFIGVHTSDSANYPDCCPEYIQSFEKMVNLATNMGVQGKKITIHAPLI 177
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ K + + +G + + + +CY D C +C AC +R +
Sbjct: 178 DMTKEQIIRTGLKLG------VDYKNTISCYSPTEDDLS-----CGNCLACIIRLDAFK- 225
Query: 234 FKEKYQD 240
K QD
Sbjct: 226 -KNNIQD 231
>gi|221135471|ref|ZP_03561774.1| regulator protein [Glaciecola sp. HTCC2999]
Length = 210
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 30/222 (13%)
Query: 19 QDSSTCLSWALDRF---DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH 75
DS T L LD+ + + L+F+YGQ++ E+E V + + +
Sbjct: 1 MDSFTLLHHILDQGLAVNEIAALTFNYGQKHVKEVEFARRVCEALG----------IQHK 50
Query: 76 ILPLAILGDI-SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
++ ++ + + SSLT ++ + + +N+ +T VP RN+I L A A L +
Sbjct: 51 VVDISAINSLMGGSSLTDDIEIPEGHYEADNMQSTVVPNRNMILLSMAVAYAVSLEADKV 110
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
G D++ YPDCR + ++ ++ + V++ TP + + K E ++G
Sbjct: 111 YYGAHSGDHAIYPDCRPEFVQKMDEVCRIANYQSVSIDTPFIHMSKIEILTRGVNLG--- 167
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L ++ TCY G+ + C C AC R + + E
Sbjct: 168 ---LDYSQTWTCYNGRE-------HACGKCGACVERLEAFTE 199
>gi|238921902|ref|YP_002935416.1| queuosine biosynthesis protein QueC [Eubacterium eligens ATCC
27750]
gi|238873574|gb|ACR73282.1| queuosine biosynthesis protein QueC [Eubacterium eligens ATCC
27750]
Length = 227
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 65/239 (27%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGG DS+T L+ A+ R+ D V LS YGQ++ E++ V
Sbjct: 2 KALVLSSGGVDSTTALALAVSRYGKDNVIALSVSYGQKHDKEIQAAKAVS---------- 51
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------------NTFVPGRNIIF 115
E L L+ + S+ SL + +I + + +T+VP RN +F
Sbjct: 52 AFYGVEQLFLDLSKIFQYSNCSLLQQSTEEIPEESYARQIEKTEGEKPVSTYVPFRNGLF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
L AA++A + I+ G D +G YPDC A+ AI G + V P +
Sbjct: 112 LSSAASIALSKDCSVILYGAHADDSAGFAYPDCSPMFNDAMNQAIFEGSGHQLKVEAPFV 171
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K E K+ ++ N E + +CY GK C C C R +
Sbjct: 172 NMTKAEVVKMGLEL------NAPYELTWSCYEGKD-------VPCGKCGTCIDRAAAFA 217
>gi|289191719|ref|YP_003457660.1| exsB protein [Methanocaldococcus sp. FS406-22]
gi|288938169|gb|ADC68924.1| exsB protein [Methanocaldococcus sp. FS406-22]
Length = 232
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 28/243 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A D V ++F+YGQR + KKI E++
Sbjct: 2 KAITVLSGGLDSTVATLIAKDLGYEVTAITFNYGQRAAK---REINSAKKICEILGI--- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD----------NNLPNTFVPGRNIIFLVFA 119
E ++ L + SSL + + +VP RN+I A
Sbjct: 56 ---EHIVVDLPFVKQFGKSSLVTEKEIPTLKMEELDSEKAFETMKAVWVPARNVIMFGIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L I IG+ + + +PD + + A + G + V + PL K E
Sbjct: 113 SGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVLEYGTLNKVKIEAPLYDKTKEE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFK 235
KL ++ + V + L+ S++CY E C C +C R++ ++ E K
Sbjct: 173 IVKLGAELEKKLGVEV-LKYSYSCYR----DNGEDFLHCGKCESCMRRKRAFLMAGVEDK 227
Query: 236 EKY 238
KY
Sbjct: 228 TKY 230
>gi|224419252|ref|ZP_03657258.1| exsB protein [Helicobacter canadensis MIT 98-5491]
gi|253826968|ref|ZP_04869853.1| transcription regulator related protein ExsB [Helicobacter
canadensis MIT 98-5491]
gi|313142755|ref|ZP_07804948.1| ExsB [Helicobacter canadensis MIT 98-5491]
gi|253510374|gb|EES89033.1| transcription regulator related protein ExsB [Helicobacter
canadensis MIT 98-5491]
gi|313131786|gb|EFR49403.1| ExsB [Helicobacter canadensis MIT 98-5491]
Length = 223
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 33/238 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
A++L SGG DS ++ A+ V L +YGQR K E + +
Sbjct: 2 DKAIVLASGGLDSCVSVACAIKDGYEVCLLHINYGQRTQKRENQAFNDIAN--------- 52
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-------TFVPGRNIIFLVFAA 120
+ I+ + L I SSL + ++ I+ +P+ T+VP RN + A
Sbjct: 53 YYGIQNKLIVDIDYLRQIGGSSLV-DSSIPIEQETIPSSTGQIPMTYVPFRNANMISIAV 111
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
+ A +G I +G E D SGYPDC + + + +++V + TPL+ L K
Sbjct: 112 SWAEVIGAKKIYVGAVEEDSSGYPDCMEIFYEKFNELLKVALLPQNNVEILTPLIHLNKA 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
E L+ L + +CY + C C +C LR +G+ E
Sbjct: 172 EIVHQGI------LLKAPLHLTWSCYQNEDK-------ACGVCESCKLRLRGFKLAGE 216
>gi|15669538|ref|NP_248349.1| ExsB [Methanocaldococcus jannaschii DSM 2661]
gi|1591989|gb|AAB99356.1| ExsB [Methanocaldococcus jannaschii DSM 2661]
Length = 235
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 28/243 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A D V ++F+YGQR + KKI E++
Sbjct: 5 KAITVLSGGLDSTVVTLIAKDLGYEVTAITFNYGQRAAK---REINSAKKICEILGI--- 58
Query: 70 SLGEDHILPLAILGDISHSS----------LTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E ++ L + SS + + + + +VP RN+I A
Sbjct: 59 ---EHIVVDLPFVKQFGKSSLITEKEIPTLKMEELDSEKAYETMKAVWVPARNVIMFGIA 115
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L I IG+ + + +PD + + A + G + V + PL K E
Sbjct: 116 SGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVLEYGTLNKVKIEAPLYDKTKEE 175
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFK 235
KL ++ + V + L+ S++CY E C C +C R++ ++ E K
Sbjct: 176 IVKLGAELEKKLGVEV-LKYSYSCY----HDNGEDFLHCGKCESCMRRKRAFLMAGVEDK 230
Query: 236 EKY 238
KY
Sbjct: 231 TKY 233
>gi|282859128|ref|ZP_06268255.1| protein ExsB [Prevotella bivia JCVIHMP010]
gi|282588083|gb|EFB93261.1| protein ExsB [Prevotella bivia JCVIHMP010]
Length = 217
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L D +SFDYGQ + K + L
Sbjct: 2 KDSVIIVSGGLDSVTLLYEKADE--IALAISFDYGQNHS----------KNELPLAAYHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ LG HI +PL + + SSL ++NN+ +T VP RN I L A +A
Sbjct: 50 EKLGIRHIVIPLKFINEYFKSSLLDGGEAIPEGHYEENNMKSTVVPFRNGIMLSIATGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ ++I D++ YPDCR I+A+ A G +V V P + K E
Sbjct: 110 ESHALKRVMIANHGGDHTIYPDCRPAFIQAMNGATATGTYINVQVEAPYTNITKAEIVHR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + ++ +CY G C C C R++ + +
Sbjct: 170 GAALG------IDYSKTWSCYKGGEK-------HCGKCGTCVERKEAFRDAG 208
>gi|56750230|ref|YP_170931.1| transcription regulator [Synechococcus elongatus PCC 6301]
gi|81300142|ref|YP_400350.1| ExsB [Synechococcus elongatus PCC 7942]
gi|81596804|sp|Q5N5K7|QUEC_SYNP6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816270|sp|Q31NK6|QUEC_SYNE7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56685189|dbj|BAD78411.1| transcription regulator [Synechococcus elongatus PCC 6301]
gi|81169023|gb|ABB57363.1| ExsB [Synechococcus elongatus PCC 7942]
Length = 231
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+T + A+ LSF YGQR+ ELE V +
Sbjct: 3 KAVVLLSGGLDSATAAAQAIADGYEAIALSFRYGQRHVRELEAARSVAAALG-------- 54
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H + SSLT + +P+T+VPGRN +F+ A +LA
Sbjct: 55 --INQHFFVDVNIAQWGGSSLTDAAEPLPGSGVVAGEIPSTYVPGRNTVFIALALSLAEA 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYET 180
+ I +G+ DYSGYPDCR D + A + +L + V + PL+ K +
Sbjct: 113 QQASAIYLGINAVDYSGYPDCRPDYLAAFQQLASLSSKVGVEGQAPQLVAPLIHDHKVDI 172
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ A +G + + + +CY G + C C +C +R + +E
Sbjct: 173 VRRAVVLG------VPIPATWSCYAGGAE-------ACGRCDSCRIRDRALIEAG 214
>gi|110825739|sp|Q58742|QUEC_METJA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
Length = 232
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 28/243 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A D V ++F+YGQR + KKI E++
Sbjct: 2 KAITVLSGGLDSTVVTLIAKDLGYEVTAITFNYGQRAAK---REINSAKKICEILGI--- 55
Query: 70 SLGEDHILPLAILGDISHSS----------LTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E ++ L + SS + + + + +VP RN+I A
Sbjct: 56 ---EHIVVDLPFVKQFGKSSLITEKEIPTLKMEELDSEKAYETMKAVWVPARNVIMFGIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L I IG+ + + +PD + + A + G + V + PL K E
Sbjct: 113 SGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVLEYGTLNKVKIEAPLYDKTKEE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFK 235
KL ++ + V + L+ S++CY E C C +C R++ ++ E K
Sbjct: 173 IVKLGAELEKKLGVEV-LKYSYSCY----HDNGEDFLHCGKCESCMRRKRAFLMAGVEDK 227
Query: 236 EKY 238
KY
Sbjct: 228 TKY 230
>gi|325851988|ref|ZP_08171071.1| protein ExsB [Prevotella denticola CRIS 18C-A]
gi|325484544|gb|EGC87460.1| protein ExsB [Prevotella denticola CRIS 18C-A]
Length = 218
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L + +SFDYGQ + K +
Sbjct: 2 KDSVIIVSGGLDSITLLYDKAET--IALAVSFDYGQNHGA----------KELPFAAHHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG HI +PL+ + SSL + N+ +T VP RN I L A +A
Sbjct: 50 RKLGIPHITIPLSFMHRYFKSSLLDGAEAIPEGHYAEENMKSTVVPFRNGIMLAIATGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G+ + I D++ YPDCR D I+A++ A G +V + P + K + +
Sbjct: 110 ESHGLKRVYIANHGGDHTIYPDCRPDFIQAMDGAATAGTFINVRIEAPYTNITKADIVRR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + ++ +CY G C C C R++ ++E K
Sbjct: 170 GTALG------VDYSKTWSCYKGSD-------VHCGKCGTCVERKEAFLEAGVK 210
>gi|33864486|ref|NP_896046.1| ATPase [Prochlorococcus marinus str. MIT 9313]
gi|81576635|sp|Q7V3W6|QUEC_PROMM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|33641266|emb|CAE22396.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9313]
Length = 229
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 32/245 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ +I A L SGG DS+T + A++ +V LSFDYGQR++ EL+ + +
Sbjct: 1 MSSMIHSTTIA--LLSGGLDSATAAALAVEAGQKVIGLSFDYGQRHRKELQAADALAAHM 58
Query: 61 VELMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLV 117
L E H++ L G S + LT+ V + + D +PNT+VPGRN +F+
Sbjct: 59 ---------GLSEHHVISVNLGSWGGSSLTDLTQTVPSEGVVDGVIPNTYVPGRNTVFIA 109
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPL 172
+LA +V+G+ DYSGYPDCR D +RA ++ +L + + + PL
Sbjct: 110 IGLSLAEARNANQLVLGINAMDYSGYPDCRPDYLRAYQSLADLANKAGREGHGIKLWAPL 169
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K + + A +G + ++++ +CY G + C C +C +R
Sbjct: 170 IDWNKKQIVQEALRLG------VPIDKTWSCYSGGD-------HACGICDSCRIRDAALS 216
Query: 233 EFKEK 237
E
Sbjct: 217 EAGRS 221
>gi|325270155|ref|ZP_08136762.1| transcription regulator ExsB [Prevotella multiformis DSM 16608]
gi|324987456|gb|EGC19432.1| transcription regulator ExsB [Prevotella multiformis DSM 16608]
Length = 218
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L + +SFDYGQ + + +
Sbjct: 2 KDSVIIVSGGLDSVTLLYDKAEE--IALAISFDYGQNHGA----------RELPFAEYHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG HI +PL+ + SSL + N+ +T VP RN I L A +A
Sbjct: 50 TKLGIPHITIPLSFMHRYFKSSLLDGAEAIPEGHYAEENMKSTVVPFRNGIMLAIATGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G+ + I D++ YPDCR D IRA++ A G +V + P + K + +
Sbjct: 110 ESHGLKRVYIANHGGDHTIYPDCRPDFIRAMDGAATAGTFVNVRIEAPYTNITKADIVRR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ ++ ++ +CY G C C C R++ + E
Sbjct: 170 GTAL------DIDYSKTWSCYKGAD-------LHCGKCGTCVERKEAFQEAG 208
>gi|260593106|ref|ZP_05858564.1| ExsB protein [Prevotella veroralis F0319]
gi|260534992|gb|EEX17609.1| ExsB protein [Prevotella veroralis F0319]
Length = 217
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L + +SFDYGQ + KK +
Sbjct: 2 KDSVIIVSGGLDSITLLYDKAET--IALAISFDYGQNHG----------KKELPYAEYHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG HI +PL + SSL + ++ N+ +T VP RN I L A +A
Sbjct: 50 QKLGIPHITIPLTFMHQYFKSSLLEGAEAIPEGHYEEENMKSTVVPFRNGIMLAIATGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + I D++ YPDCR + I A++ A + G V V P + K + +
Sbjct: 110 ESHELKRVYIANHGGDHTIYPDCRPEFIDAMDKATSAGTFVDVRVEAPYTNISKADIVRR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + ++ +CY G C C C R++ + +
Sbjct: 170 GTALG------IDYAKTWSCYKGSE-------IHCGKCGTCVERKEAFADAG 208
>gi|288799903|ref|ZP_06405362.1| ExsB protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288333151|gb|EFC71630.1| ExsB protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 222
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L D +SF+YG + K +
Sbjct: 2 KDSIIIVSGGMDSITLLYDKKDE--IALGISFNYGSNHN----------NKEIPFAKMHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ LG HI + L + SSL + +N+ +T VP RN I L A +A
Sbjct: 50 EHLGIQHITIDLDFMHQYFKSSLLEGAEKIPEGHYASDNMKSTVVPFRNGIMLSIAIGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G+ ++I D++ YPDCR+D I A+ A G ++T+ P + K + K+
Sbjct: 110 ESNGLKKVLIANHGGDHTIYPDCRNDFIEAMNLASQAGTFVNITIEAPYTHITKGDIAKI 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + ++ E+ +CY G+ + C C C R++ E K
Sbjct: 170 GKKL------DINFAETWSCYKGEE-------HHCGVCGTCIERKEALQEAGIK 210
>gi|268609644|ref|ZP_06143371.1| queuosine biosynthesis protein QueC [Ruminococcus flavefaciens
FD-1]
Length = 228
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+LFSGG DSSTCL+ A+ ++ + V LS YGQ++ E++ +K+V+
Sbjct: 2 KALVLFSGGLDSSTCLALAVKKYGAENVVALSIYYGQKHNKEIQAA----EKLVKYYGVT 57
Query: 68 KDSLGEDHILPLAILGDISHSS-----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+L I + ++ S T ++ D +T+VP RN +FL AA++
Sbjct: 58 WKTLDLAPIFADSDCSLLTQSDKEIPKETYAEQLEETDGKPVSTYVPFRNGLFLASAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A I G D +G YPDC A+ AI G + + P + L K +
Sbjct: 118 ALSNDCEVIYYGAHSDDAAGNAYPDCSAKFNNAMNEAIFTGSGEQLRIEAPFVDLNKADV 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++ ++ N+ E + +CY G C C C R +
Sbjct: 178 VRMGTEL------NVPYEMTWSCYEGGDKP-------CGVCGTCRDRIAAFE 216
>gi|254445125|ref|ZP_05058601.1| exsB protein [Verrucomicrobiae bacterium DG1235]
gi|198259433|gb|EDY83741.1| exsB protein [Verrucomicrobiae bacterium DG1235]
Length = 243
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 33/245 (13%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELM 64
+ SA+ ++SGG DS+ L + ++ LS +YGQ++ EL+ + +
Sbjct: 7 SRPGSAVAVYSGGMDSTVMLYRMRELGIAIKGALSVNYGQKHSKELDAAAEFCRALG--- 63
Query: 65 PKWKDSLGEDHILPLAILGDISH-----SSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E + L+ L I SS + ++ + +T VP RN+I L A
Sbjct: 64 -------IEHRVADLSGLQGIFGKSSLTSSAEEVPEGHYEEEQMKSTVVPNRNMILLSVA 116
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A LG + D++ YPDCR + A++ AI L S V+++ P + K +
Sbjct: 117 TSWAISLGAEAVAYAAHGGDHAIYPDCREEFAEALDKAIRLCDWSEVSLYRPFVTWTKAD 176
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFK 235
K +G + LE + +CY G C C C R++ + E
Sbjct: 177 IAKAGAKLG------VKLERTWSCYKGGD-------RHCGRCGTCVERREAFHLAGVEDS 223
Query: 236 EKYQD 240
Y+D
Sbjct: 224 TAYED 228
>gi|91200479|emb|CAJ73527.1| similar to PP-loop ATPase family including transcriptional
regulator ExsB [Candidatus Kuenenia stuttgartiensis]
Length = 225
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 67/236 (28%), Positives = 100/236 (42%), Gaps = 28/236 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVEL 63
+K +A++L SGG DS + A + +D + L +YGQR + EL E+
Sbjct: 1 MKGKDTAIVLASGGLDSCVTAAIANETYD-LALLHINYGQRTESKELSAFH-------EI 52
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFA 119
+K + I + L I SSLT + + +P T+VP RN +FL A
Sbjct: 53 AAYYKVPAEQILIANIDYLKKIGGSSLTDTMIPVQEAEPDSKEIPTTYVPFRNTLFLSVA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKK 177
+ A +G + IG D GYPDC+ I+ G E+ + V TPL++ K
Sbjct: 113 VSWAEVIGAEKVFIGAVSHDTPGYPDCKPFYYEVFNKLIDAGTKPETRIAVETPLIFKTK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
E L + L S +CY C C +CYLR+K + E
Sbjct: 173 AEIVTLGISLKA------PLHLSWSCYKNTDK-------ACGVCNSCYLRRKAFEE 215
>gi|328953828|ref|YP_004371162.1| exsB protein [Desulfobacca acetoxidans DSM 11109]
gi|328454152|gb|AEB09981.1| exsB protein [Desulfobacca acetoxidans DSM 11109]
Length = 227
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 102/240 (42%), Gaps = 30/240 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
+ A++L SGG DS + A +D + +YGQR + EL+ EL
Sbjct: 1 MSDRKLAVVLLSGGLDSCVTAAVAGQDYD-LALFHGNYGQRTVRRELQA-------FREL 52
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFA 119
++ + L LG I SSLT + LP+T+VP RN I +
Sbjct: 53 AVFFRCRHLLEANLD--YLGAIGGSSLTDASLAIPQTDTESEELPSTYVPFRNTILIAAV 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKK 177
A +G + + IG D YPDCR D A I LG +H+ +HTPL+ L K
Sbjct: 111 VAWAEVIGASAVFIGANIIDGPDYPDCRPDYFNAYNRLIELGTRPGTHIRIHTPLIHLDK 170
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +L + + LE + +CY + C CP+C +R KG+ E K
Sbjct: 171 ADIIRLGLKL------QVPLELTWSCYRNED-------RACGCCPSCRIRLKGFAEVGIK 217
>gi|256810146|ref|YP_003127515.1| exsB protein [Methanocaldococcus fervens AG86]
gi|256793346|gb|ACV24015.1| exsB protein [Methanocaldococcus fervens AG86]
Length = 232
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A + + ++F+YGQ+ ++ + KKI E++
Sbjct: 2 KAVTVLSGGLDSTVSTLIAKNLGYEITAITFNYGQKA---VKREINASKKICEILDI--- 55
Query: 70 SLGEDHILPLAILGDISHSS----------LTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
++ L + SS +++ + + +VP RN+I L A
Sbjct: 56 ---NHIVVDLPFIKQFKKSSLITENEIPSLKIEDLDSEKAHETMKTVWVPARNLIMLSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L + IG+ + + +PD + + A+ A+ G + V + PL K E
Sbjct: 113 SGFAEALDAEKVFIGINKEEGLTFPDNTIEFVDALNKALEYGTLNKVKIEAPLYDKTKEE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFK 235
K+ ++I + + + L+ S++CY E C C +C R++ ++ E K
Sbjct: 173 IVKIGREIEKKLGLEV-LKYSYSCYK----DNGEDFLHCGECESCMRRKRAFLMAGVEDK 227
Query: 236 EKY 238
+Y
Sbjct: 228 TRY 230
>gi|307261576|ref|ZP_07543244.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868699|gb|EFN00508.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 193
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 118/205 (57%), Gaps = 21/205 (10%)
Query: 33 DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK 92
+ VE ++F YGQR+ +ELE + K + + ++ +++ I+ +++ +
Sbjct: 2 ENVEVVTFQYGQRHAIELEKAAWIAKDLG----------VKQTLIDTSVIKAITSNAMME 51
Query: 93 NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
+K Q+ N PNTFV GRN +FL++ A A GI I GVCETD+SGYPDCR ++
Sbjct: 52 EREIK-QEGNTPNTFVDGRNALFLLYTAIYAKGQGIQTIFTGVCETDFSGYPDCRDVFVK 110
Query: 153 AIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
++ +NL M+ + + TPLM+L K +TW LA +G + I + +HTCYLG
Sbjct: 111 SMNVTLNLAMDYNFNIRTPLMYLTKKQTWALADKLGAF---DYIRQHTHTCYLGVEG--- 164
Query: 213 EWGYGCNSCPACYLRQKGWMEFKEK 237
GC++CP+C LR+KG E+ +
Sbjct: 165 ----GCHTCPSCVLREKGLNEYLSE 185
>gi|300727735|ref|ZP_07061121.1| protein ExsB [Prevotella bryantii B14]
gi|299775023|gb|EFI71629.1| protein ExsB [Prevotella bryantii B14]
Length = 217
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 30/229 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L + + +SFDYG + K +
Sbjct: 2 KDSVIVVSGGLDSITLLYE--KQAEIALGISFDYGSNHNS----------KEIPFAKMHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ LG HI + L + SSL + + N+ +T VP RN I L A LA
Sbjct: 50 ERLGIKHITINLEFMHQYFKSSLLEGGDAIPEGNYDEENMKSTVVPFRNGIMLSIAVGLA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G+ I I D++ YPDCR + I+AI+ A G +V + P + K + K
Sbjct: 110 ESHGLKRIFIANHGGDHTIYPDCRPEFIQAIDNAAQAGTYENVRIEAPYTNITKADIVKR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + E++ +CY G C C C R++ +
Sbjct: 170 GSALG------IHYEDTWSCYKGGD-------IHCGKCGTCTERKEAFE 205
>gi|307250348|ref|ZP_07532297.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307252732|ref|ZP_07534623.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307254994|ref|ZP_07536812.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257148|ref|ZP_07538920.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306857623|gb|EFM89730.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859764|gb|EFM91786.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306861867|gb|EFM93843.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864310|gb|EFM96221.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 193
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 118/205 (57%), Gaps = 21/205 (10%)
Query: 33 DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK 92
+ VE ++F YGQR+ +ELE + K + + ++ +++ I+ +++ +
Sbjct: 2 ENVEVVTFQYGQRHAIELEKAAWIAKDLG----------VKQTLIDTSVIKAITSNAMME 51
Query: 93 NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
+K Q+ N PNTFV GRN +FL++ A A GI I GVCETD+SGYPDCR ++
Sbjct: 52 EREIK-QEGNTPNTFVDGRNALFLLYTAIYAKGQGIRTIFTGVCETDFSGYPDCRDVFVK 110
Query: 153 AIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
++ +NL M+ + + TPLM+L K +TW LA +G + I + +HTCYLG
Sbjct: 111 SMNVTLNLAMDYNFNIRTPLMYLTKKQTWALADKLGAF---DYIRQHTHTCYLGVEG--- 164
Query: 213 EWGYGCNSCPACYLRQKGWMEFKEK 237
GC++CP+C LR+KG E+ +
Sbjct: 165 ----GCHTCPSCVLREKGLNEYLSE 185
>gi|281419887|ref|ZP_06250886.1| ExsB protein [Prevotella copri DSM 18205]
gi|281406014|gb|EFB36694.1| ExsB protein [Prevotella copri DSM 18205]
Length = 217
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L D +SF+YG + ++ +
Sbjct: 2 KDSVIIVSGGMDSITLLYDKKDE--IALGISFNYGSNHN----------EREIPFAKMHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ LG HI + L + SSL + D+N+ +T VP RN I L A +A
Sbjct: 50 ERLGIKHITIDLGFMHQYFKSSLLEGADAIPEGHYADDNMKSTVVPFRNGIMLSIAIGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + I D++ YPDCR + I+AI+ A G V V P + K + ++
Sbjct: 110 ESNNLKKVFIANHGGDHTIYPDCRPEFIKAIDEAAEAGTFVDVRVVAPYTNITKGQIAEI 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G + E+ +CY G C C C R++ E +
Sbjct: 170 GKKLG------IDYAETWSCYKGGEK-------HCGKCGTCVERKEALAEAGIE 210
>gi|163746922|ref|ZP_02154279.1| ExsB [Oceanibulbus indolifex HEL-45]
gi|161380036|gb|EDQ04448.1| ExsB [Oceanibulbus indolifex HEL-45]
Length = 233
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + +SFDYGQR++ E++ K++
Sbjct: 2 KTLVICSGGLDSVSLAHITAVEHQLTRLVSFDYGQRHRKEVDFAEAAAKRLGVPF----- 56
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ + +G +S S+LT ++ + ++ + T VP RN I L +A
Sbjct: 57 -----HLIDMRGIGAALSGSALTDDIDVPDGHYAEDTMKITVVPNRNAIMLSIGFGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR + RA + ++ V +HTP + K E +
Sbjct: 112 QGDEAVATAVHGGDHFIYPDCRPEFTRAFDAMQQAALDGYAQVRLHTPFVEQSKAEIVRQ 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 172 GAQHG------TPFAETWSCYKGGE-------VHCGRCGTCVERREAF 206
>gi|148243543|ref|YP_001228700.1| PP-loop superfamily ATPase [Synechococcus sp. RCC307]
gi|189029542|sp|A5GWT8|QUEC_SYNR3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|147851853|emb|CAK29347.1| Predicted PP-loop superfamily ATPase [Synechococcus sp. RCC307]
Length = 222
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 22/233 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ + + L SGG DS+T + A + RV LSFDYGQR++ EL V + +
Sbjct: 1 MSSTTIALLSGGLDSATAAALAREAGHRVIGLSFDYGQRHQRELRAAAEVAQAL------ 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK----NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L E H + + L SSLT +QD +P+T+VPGRN +F+ +L
Sbjct: 55 ---GLAEHHTINV-NLAAWGGSSLTDLDQPVPDQGVQDGVIPSTYVPGRNTVFIALGLSL 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G +V+GV DYSGYPDCR D + A + +L S H +W E W
Sbjct: 111 AEAKGAERLVLGVNAIDYSGYPDCRPDYLDAYQHLADLASRSGREGHGTQLWAPLVE-WS 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +N+ + + +CY G + C C +C +R E
Sbjct: 170 KTKIVEEALRLNVPIASTWSCYAGGD-------HPCGVCDSCRIRDAALREAG 215
>gi|288818468|ref|YP_003432816.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|288787868|dbj|BAI69615.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|308752058|gb|ADO45541.1| exsB protein [Hydrogenobacter thermophilus TK-6]
Length = 214
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
S L+L SGG DS+T L + FD++ +SFDYGQR++VE++ + K
Sbjct: 2 KSVLVLLSGGMDSATLLWLSKKEFDKIYAISFDYGQRHRVEIKYAKDLAK---------M 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ E I+ + + S+L A + P T VP RN+ F+ AA+ A
Sbjct: 53 AQVEEHFIVEVPHYSVLKGSALLDQEASIPKGEYPQEEPPITTVPMRNLTFISIAASFAD 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWLKKY 178
L I +I IGV D S YPDCR + I + E A+N + + ++ P + + K
Sbjct: 113 TLEIDHIGIGVHALD-SPYPDCRPEFITSAEAAVNASSIFVAKTKKRIHIYAPFLGMSKR 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + +D+G + E++++CY+G C C AC R++
Sbjct: 172 DIALIGRDLG------VPFEKTYSCYVGTEPP-------CGECAACLQRKQAL 211
>gi|307248117|ref|ZP_07530145.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306855294|gb|EFM87469.1| Queuosine biosynthesis protein queC [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 193
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 117/204 (57%), Gaps = 21/204 (10%)
Query: 34 RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
VE ++F YGQR+ +ELE + K + + ++ +++ I+ +++ +
Sbjct: 3 NVEVVTFQYGQRHAIELEKAAWIAKDLG----------VKQTLIDTSVIKAITSNAMMEE 52
Query: 94 VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRA 153
+K Q+ N PNTFV GRN +FL++ A A GI I GVCETD+SGYPDCR +++
Sbjct: 53 REIK-QEGNTPNTFVDGRNALFLLYTAIYAKGQGIRTIFTGVCETDFSGYPDCRDVFVKS 111
Query: 154 IETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYE 213
+ +NL M+ + + TPLM+L K +TW LA +G + I + +HTCYLG
Sbjct: 112 MNVTLNLAMDYNFNIRTPLMYLTKKQTWALADKLGAF---DYIRQHTHTCYLGVEG---- 164
Query: 214 WGYGCNSCPACYLRQKGWMEFKEK 237
GC++CP+C LR+KG E+ +
Sbjct: 165 ---GCHTCPSCVLREKGLNEYLSE 185
>gi|257386659|ref|YP_003176432.1| exsB protein [Halomicrobium mukohataei DSM 12286]
gi|257168966|gb|ACV46725.1| exsB protein [Halomicrobium mukohataei DSM 12286]
Length = 271
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 97/237 (40%), Gaps = 28/237 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A SA++L SGG DS+T A+DR + L YGQ E R C + +
Sbjct: 43 ADSAVILASGGMDSATAAYEAVDRGYEALYLLHTSYGQ--ATEETERACAQALADHVDAA 100
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ H L I SSLT + + +P ++VP RN L A +
Sbjct: 101 DFLHVETGH------LAQIGASSLTDEEMAVDDADLDSDEIPTSYVPFRNANLLSMAVSY 154
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
A + I IG D+SGYPDCR A + I+ G E+ + + P + K +
Sbjct: 155 AEANDCSAIFIGAHSEDFSGYPDCRPQFFDAFQQVIDAGTKPETEIELVAPFVEWSKTDI 214
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++G + E++ +CY E C +C AC R + + E+
Sbjct: 215 AERGLELG------VPYEDTWSCYR-------ESPPACGTCDACAFRLQAFQNLGER 258
>gi|225851495|ref|YP_002731729.1| ExsB protein [Persephonella marina EX-H1]
gi|254764364|sp|C0QST3|QUEC_PERMH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|225645380|gb|ACO03566.1| ExsB protein [Persephonella marina EX-H1]
Length = 227
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 32/237 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K++ S ++L SGG DS+ L A FD+V +SFDYGQ+++VEL+ + ++
Sbjct: 1 MKQSSSIIILVSGGMDSAALLWLAKKEFDKVYAVSFDYGQKHRVELDFAKKLTEE----- 55
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ E I + L I S+LT + + P T VP RN+ FL AA+
Sbjct: 56 ----AGVEEHFIAEVPHLKGIKGSALTDRSVEIPSEEYPEGPPVTTVPMRNLNFLSIAAS 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWL 175
A I NI IGV D S YPDCR + + A E AIN ++ +TV+TP + +
Sbjct: 112 FADIYEIENIGIGVHSVD-SPYPDCRAEFVSAAEAAINASSVMVAKKKNRITVYTPFLGM 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K + ++ ++G + E++++CY G C C C R + +
Sbjct: 171 TKTDVLRIGLELG------VPYEKTYSCYRGTIPP-------CGECATCRQRIEAFR 214
>gi|225572382|ref|ZP_03781246.1| hypothetical protein RUMHYD_00676 [Blautia hydrogenotrophica DSM
10507]
gi|225040149|gb|EEG50395.1| hypothetical protein RUMHYD_00676 [Blautia hydrogenotrophica DSM
10507]
Length = 231
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 26/235 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A++LFSGG DS+TCL A++++ V LS YGQ+++ E+E ++I+E
Sbjct: 1 MSEKAMVLFSGGVDSTTCLGLAIEKYGVQNVIPLSVQYGQKHEKEVEAA----RRILEYY 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLP-NTFVPGRNIIFLVFA 119
L I + +SHS A + +P +T+VP RN +FL A
Sbjct: 57 GIEGMELDLTPIFAYSDCSLLSHSEKEIPEASYAEQLRENEGVPVSTYVPFRNGLFLACA 116
Query: 120 ATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A++A + I G D +G YPDC ++ A+ G + + P + + K
Sbjct: 117 ASIALSRECSCIYYGAHRDDAAGSAYPDCSESFFESMNRAVYEGSGQQIRIEAPFIKMNK 176
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ + + E + +CY GK C C C R + +
Sbjct: 177 AQIVAEGLRL------KVPYEFTWSCYEGKEKP-------CGVCGTCIDRSEAFK 218
>gi|45357789|ref|NP_987346.1| ExsB family transcriptional regulator [Methanococcus maripaludis
S2]
gi|74555941|sp|Q6M0P3|QUEC_METMP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|45047349|emb|CAF29782.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 233
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 101/236 (42%), Gaps = 24/236 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ +A + + T++F+YGQ + L + KKI +++
Sbjct: 2 KAICVLSGGLDSAVTSMFAKSKNYDISTVTFNYGQ---MALNQEIKSAKKISDILN---- 54
Query: 70 SLGEDHILPLAILGDISHS----------SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ H++ + + + S S + + + +VP RN+I A
Sbjct: 55 --ADHHVIDINFVKEFSKSGLNTGNIPEPENEDLDDFEKSEKTMKAVWVPARNMIMFSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A +G I G+ + + +PD + I ++ G + V + PL L K E
Sbjct: 113 SGFAEGIGAEKIFSGLNKEEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYELNKPE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
KL +++ + + + L+ S++CY + C +C +C R++ + E
Sbjct: 173 IAKLGKELELKLDLEV-LKYSYSCYK----DNGKDYLHCGTCESCMRRKRAFKEAG 223
>gi|189039053|sp|A2CDY7|QUEC_PROM3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 226
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 30/234 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L SGG DS+T + A++ +V LSFDYGQR++ EL+ + L
Sbjct: 7 IALLSGGLDSATAAALAIEAGQKVIGLSFDYGQRHRKELQAAEELAA---------CMGL 57
Query: 72 GEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E H++ L G S + LT+ V + + D +PNT+VPGRN +F+ +LA
Sbjct: 58 TEHHVISVNLGSWGGSSLTDLTQTVPSEGVVDGVIPNTYVPGRNTVFIAIGLSLAEARHA 117
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
+V+GV DYSGYPDCR D ++A ++ +L + + + PLM K +
Sbjct: 118 NRLVLGVNAMDYSGYPDCRPDYLKAYQSLADLANKAGREGHGIKLWAPLMHWHKKRIVQE 177
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A +G + ++++ +CY G + C C +C +R E
Sbjct: 178 ALRLG------VPIDKTWSCYSGGD-------HACGICDSCRIRDAALSEAGRS 218
>gi|51244019|ref|YP_063903.1| hypothetical protein DP0167 [Desulfotalea psychrophila LSv54]
gi|81643310|sp|Q6ARX9|QUEC_DESPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|50875056|emb|CAG34896.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 219
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKD 69
++++ SGG DS+ L+ L + +SFDYG ++ EL + + ++
Sbjct: 4 SIIVLSGGMDSAVLLAQTLKEGKTAQAISFDYGSKHNDRELPMAVGLCEEFA-------- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ I+ L +G++ SSL N+ +T VP RN I L AA A
Sbjct: 56 --IKHQIIKLPFIGELFSSSLLTGGEEIPDGAYGQENMKSTVVPFRNGIMLAIAAGYAES 113
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ +++G D+ YPDCR + A A+NLG + V + P + K + L +
Sbjct: 114 VQAGEVLLGSHSGDHHIYPDCRPEFNNAFAEAVNLGTDGQVAIRFPFSEMTKRDIGDLGR 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ +L ++ TCY G C C AC R++
Sbjct: 174 TL------DLDFAKTWTCYKGGE-------LHCGVCAACDERKEALR 207
>gi|303236575|ref|ZP_07323157.1| protein ExsB [Prevotella disiens FB035-09AN]
gi|302483228|gb|EFL46241.1| protein ExsB [Prevotella disiens FB035-09AN]
Length = 217
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L + +SFDYGQ + K +
Sbjct: 2 KDSIIIVSGGLDSITLLHQKANT--IALAISFDYGQNH----------ASKELPFAALHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG HI +PL + + SSL + +++N+ +T VP RN I L AA +A
Sbjct: 50 KRLGIRHIVIPLQFMHEYFKSSLLEGSEKIPEGHYEEDNMKSTVVPFRNGIMLAIAAGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I I D++ YPDCR + I A+ A G ++ + + K + +
Sbjct: 110 ESHHLNRIYIANHGGDHTIYPDCRPEFIDAMTAATQAGTFNNTRIEAAFTNITKADIVSI 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + E+ +CY + + C C C R++ + +
Sbjct: 170 GTKLG------IDYAETWSCYK-------DGNHHCGKCGTCVERKEAFQQAG 208
>gi|124024655|ref|YP_001018962.1| ATPase [Prochlorococcus marinus str. MIT 9303]
gi|123964941|gb|ABM79697.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9303]
Length = 229
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 30/234 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L SGG DS+T + A++ +V LSFDYGQR++ EL+ + L
Sbjct: 10 IALLSGGLDSATAAALAIEAGQKVIGLSFDYGQRHRKELQAAEELAA---------CMGL 60
Query: 72 GEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E H++ L G S + LT+ V + + D +PNT+VPGRN +F+ +LA
Sbjct: 61 TEHHVISVNLGSWGGSSLTDLTQTVPSEGVVDGVIPNTYVPGRNTVFIAIGLSLAEARHA 120
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
+V+GV DYSGYPDCR D ++A ++ +L + + + PLM K +
Sbjct: 121 NRLVLGVNAMDYSGYPDCRPDYLKAYQSLADLANKAGREGHGIKLWAPLMHWHKKRIVQE 180
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A +G + ++++ +CY G + C C +C +R E
Sbjct: 181 ALRLG------VPIDKTWSCYSGGD-------HACGICDSCRIRDAALSEAGRS 221
>gi|260912184|ref|ZP_05918738.1| transcription regulator ExsB [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633711|gb|EEX51847.1| transcription regulator ExsB [Prevotella sp. oral taxon 472 str.
F0295]
Length = 217
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L D +SFDYG + + L
Sbjct: 2 KDSVIVVSGGMDSITLLYEKKDE--IALGISFDYGSNHN----------HNELPLAALHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG H+ +PL + SSL ++ ++N+ +T VP RN I L AA +A
Sbjct: 50 QRLGIAHVVIPLGFMHQYFKSSLLESGANIPDGSYDEDNMKSTVVPFRNGIMLAVAAGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G+T ++I D++ YPDCR + I A++ A+ G ++V V P + K + +
Sbjct: 110 ESNGLTKVLIANHGGDHTIYPDCRPEFIAAMDAAVKAGTFANVHVVAPYTNISKADIARK 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + E+ +CY G C +C C R++ E
Sbjct: 170 GSFLG------IDYAETWSCYKGGD-------VHCGTCGTCVERKEALREAG 208
>gi|134046496|ref|YP_001097981.1| exsB protein [Methanococcus maripaludis C5]
gi|167016435|sp|A4FZY3|QUEC_METM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|132664121|gb|ABO35767.1| exsB protein [Methanococcus maripaludis C5]
Length = 233
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 24/236 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A + T++F+YGQ + L + +KI E++
Sbjct: 2 KAICVLSGGLDSAVTSLVAKSENYDITTVTFNYGQ---MALNQEIKSAEKISEILN---- 54
Query: 70 SLGEDHILPLAILGDISHSS-LTKNVAMKIQDN---------NLPNTFVPGRNIIFLVFA 119
+ H++ + + + S S T N+ +++ + +VP RN+I A
Sbjct: 55 --ADHHVIDINFVKEFSKSGLNTGNIPEPEKEDLDDFEKSEKTMKAVWVPARNMIMFSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A + I G+ + +PD + I ++ G + V + PL L K E
Sbjct: 113 SGFAEGIDAEKIFSGLNREEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYELNKPE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
KL +++ + + +I + S++CY E C +C +C R++ + E
Sbjct: 173 IAKLGKELELKLDLEVI-KYSYSCYR----DNGEDYLHCGTCESCMRRKRAFKEAG 223
>gi|87301705|ref|ZP_01084545.1| ExsB [Synechococcus sp. WH 5701]
gi|87283922|gb|EAQ75876.1| ExsB [Synechococcus sp. WH 5701]
Length = 243
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 32/242 (13%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D AP A+ L SGG DS+T + A++ RV LSFDYGQR++ ELE + +
Sbjct: 15 DPGSPAPLAVALLSGGLDSATAAALAIEAGYRVIGLSFDYGQRHRQELEAAALLASVL-- 72
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMK---IQDNNLPNTFVPGRNIIFLVF 118
L E H + L L S+LT ++A+ + + +P T+VPGRN +F+
Sbjct: 73 -------GLIEHHTIAL-NLAAWGGSALTDPDIALPGAGVVEGVIPPTYVPGRNTVFIAL 124
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLM 173
+LA G + +V+GV DYSGYPDCR D + A ++ +L ++ + PL+
Sbjct: 125 GLSLAEARGASRLVLGVNAVDYSGYPDCRPDYLAAFQSLADLASKAGREGQGAQLWAPLL 184
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + A + L +E + +CY G C C +C +R +
Sbjct: 185 SWSKTRIVEEALRL------RLPIERTWSCYAGGT-------VPCGRCDSCRIRDAALRD 231
Query: 234 FK 235
Sbjct: 232 AG 233
>gi|288928273|ref|ZP_06422120.1| ExsB protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288331107|gb|EFC69691.1| ExsB protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 217
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L D +SFDYG + + L
Sbjct: 2 KDSVIVVSGGMDSVTLLYEKKDE--IALGISFDYGSNHN----------HNELPLAALHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG H+ +PL + SSL ++ + N+ +T VP RN + L AA +A
Sbjct: 50 QRLGIAHVVIPLGFMHQYFKSSLLESGESIPDGSYDEENMKSTVVPFRNGVMLAVAAGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G+T ++I D++ YPDCR + I A++ A+ G + V V P + K + +
Sbjct: 110 ESNGLTKVLIANHGGDHTIYPDCRPEFIAAMDAAVEAGTFARVRVVAPYTNISKADIARR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G + E+ +CY G C +C C R++ E +
Sbjct: 170 GRALG------IDYAETWSCYKGGD-------VHCGTCGTCVERKEALREAGIE 210
>gi|312136612|ref|YP_004003949.1| exsb protein [Methanothermus fervidus DSM 2088]
gi|311224331|gb|ADP77187.1| exsB protein [Methanothermus fervidus DSM 2088]
Length = 231
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 37/249 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLS--WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ KAP A+ + SGG DS L + V ++FDYGQ+ E+E + KKI +
Sbjct: 1 MVKAPRAISILSGGLDSVVALFDFIKKNPNGEVHAITFDYGQK-SAEME--INASKKICK 57
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----------DNNLPNTFVPGR 111
+ + +L + LG + S+LT + + + +VP R
Sbjct: 58 YLGI------KHSVLNVKWLGKLGTSALTTDKEIPKLKISDLEDKEKCEKTAKMVWVPAR 111
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
NI+F A+ A I++G + S +PD + + A + +G S++ + P
Sbjct: 112 NIVFTAIASAFAEAENAEKIIVGWDREEASTFPDNSKEFLSAFNNLLAIGTMSNINIEAP 171
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ + K+E KL + G + E +++CY G C C +C R++ +
Sbjct: 172 LIDMDKHEIVKLGKKYG------VPFEFTYSCYQGFEK-------HCGVCESCVRRKRAF 218
Query: 232 MEFKEKYQD 240
K +D
Sbjct: 219 K--LAKVED 225
>gi|289808109|ref|ZP_06538738.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 160
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 13/168 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 2 KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY
Sbjct: 58 -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
++ ++ GVCETD+SGYPDCR + ++A+ A+NLGM + TPL
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPL 160
>gi|55378863|ref|YP_136713.1| succinoglycan biosynthesis ExsB protein [Haloarcula marismortui
ATCC 43049]
gi|74517585|sp|Q5V0E6|QUEC_HALMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|55231588|gb|AAV47007.1| succinoglycan biosynthesis ExsB protein [Haloarcula marismortui
ATCC 43049]
Length = 232
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 91/241 (37%), Gaps = 30/241 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNK-VELECRLCVRKKIVE 62
+ A++L SGG DS+T A R + L YGQ + E EC + +
Sbjct: 1 MTDDTRAVVLASGGMDSATAAYEAQTRGYDHLYLLHTSYGQNTEDREYECASALADHVDA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ L I SSLT + + +P ++VP RN L
Sbjct: 61 ADFLH---------VETGHLTQIGASSLTDDSMEVADADTDSDEIPTSYVPFRNANLLSM 111
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLK 176
A + A + IG D+SGYPDCR A + I+ G ++ + + P +
Sbjct: 112 AVSYAEANDCGAVFIGAHSEDFSGYPDCRPAFFDAFQGVIDAGTKPDTDIALVAPFVEWS 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K + + ++G + ++ +CY C +C AC R + + E
Sbjct: 172 KTDIAERGVELG------VPYADTWSCYRDDEP-------ACGTCDACAFRLEAFQRIGE 218
Query: 237 K 237
+
Sbjct: 219 R 219
>gi|87307052|ref|ZP_01089198.1| Predicted PP-loop superfamily ATPase [Blastopirellula marina DSM
3645]
gi|87290425|gb|EAQ82313.1| Predicted PP-loop superfamily ATPase [Blastopirellula marina DSM
3645]
Length = 219
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 20/227 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + SGG DS+T L +D V +S +YGQR+ EL+ + K+
Sbjct: 3 KVVAVVSGGMDSATLLYHLIDAGHDVRAISINYGQRHVKELDYARQLCDKVGV------P 56
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ D + G S S + + N+ T VP RN+I L + A
Sbjct: 57 QIVADLSAINPLFGANSLSGREIEIPEGHYAEENMKLTVVPNRNMILLSVSIAWAISQEC 116
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ G D++ YPDCR + A++ A L S V + P + + K + + ++G
Sbjct: 117 VAVAYGAHSGDHAIYPDCRPEFAAAMDQAAKLCDWSAVELWRPFVDIDKGDIAQRGSELG 176
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ E + TCY G + C C AC R++ + +
Sbjct: 177 ------VPYELTWTCYKGLAE-------HCGKCGACVERKEAFAKHG 210
>gi|150403146|ref|YP_001330440.1| exsB protein [Methanococcus maripaludis C7]
gi|167016436|sp|A6VIL3|QUEC_METM7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|150034176|gb|ABR66289.1| exsB protein [Methanococcus maripaludis C7]
Length = 233
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 24/236 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A + T++F+YGQ + L + KKI E++
Sbjct: 2 RAICVLSGGLDSAVTSLAAKFENYDITTVTFNYGQ---MALNQEIKSAKKISEILN---- 54
Query: 70 SLGEDHILPLAILGDISHS----------SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ H++ + + + S S + + + +VP RN+I A
Sbjct: 55 --ADHHVIDINFVKEFSKSGLNTGEIPEPEKEDLDDFEKSEKTMKAVWVPARNMIMFSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A +G I G+ + + +PD + I ++ G + V + PL L K E
Sbjct: 113 SGFAEGIGAEKIFSGLNKEEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYELNKPE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
KL +++ + + + L+ S++CY E C +C +C R++ + E
Sbjct: 173 IAKLGKELEVKLDLEV-LKYSYSCYR----DNGEDYLHCGTCESCMRRKRAFKEAG 223
>gi|296109149|ref|YP_003616098.1| exsB protein [Methanocaldococcus infernus ME]
gi|295433963|gb|ADG13134.1| exsB protein [Methanocaldococcus infernus ME]
Length = 232
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 26/234 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A+ + SGG DS+ +A + ++++YGQR K E+E KKI E++
Sbjct: 2 KAVSILSGGLDSTVATMYAKALGYDLLAITYNYGQRAAKREIEAA----KKISEILKI-- 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----------NNLPNTFVPGRNIIFLVF 118
E ++ L + + S+L N + + +VP RN+IFL
Sbjct: 56 ----EHKVVELNFVKEFGKSALITNKEIPKLTFEDLDSEKAFETMRAVWVPARNVIFLAI 111
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A+ A + I IG+ + + +PD + + A A+ G + V V PL K
Sbjct: 112 ASGFAEAIDGEKIFIGINKEEGVTFPDNTIEFVEAFNRALEYGTLNKVKVEAPLYDKTKE 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
E KL +++ + V + L+ S++CY E C C +C R++ +
Sbjct: 172 EIVKLGKELEEKLGVKV-LKYSYSCYK----DNGESFLHCGECESCLRRKRAFK 220
>gi|317505473|ref|ZP_07963391.1| transcription regulator ExsB [Prevotella salivae DSM 15606]
gi|315663386|gb|EFV03135.1| transcription regulator ExsB [Prevotella salivae DSM 15606]
Length = 217
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 92/232 (39%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L D +SFDYG + K +
Sbjct: 2 KDSVIIVSGGMDSITLLYDKKDE--IALGISFDYGSNHNA----------KEIPFAEMHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG HI + L + SSL + D N+ +T VP RN I L A +A
Sbjct: 50 KRLGIKHITINLDFMHQYFKSSLLQGAEAIPEGHYADENMKSTVVPFRNGIMLSIAIGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ ++I D++ YPDCR I+AI+ A N G +V V P + K + ++
Sbjct: 110 ESNQLKKVLIANHGGDHTIYPDCRPQFIQAIDAAANAGTFVNVRVEAPYTNITKGDIARI 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +G L E+ +CY G C C C R++ E
Sbjct: 170 GKRLG------LDYTETWSCYKGGEK-------HCGKCGTCIERKEALQEAG 208
>gi|189346042|ref|YP_001942571.1| exsB protein [Chlorobium limicola DSM 245]
gi|254764319|sp|B3EGF5|QUEC_CHLL2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189340189|gb|ACD89592.1| exsB protein [Chlorobium limicola DSM 245]
Length = 226
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC--RLCVRKKIVELMPK 66
A+LL SGG DS + A + + + +YGQR + ELEC R+C +I +
Sbjct: 2 KAVLLISGGMDSLVTTAIAAEEKLELAAMHVNYGQRTWQKELECFRRICNHYQIRHRLE- 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ L SSLT +Q ++P ++VP RN FL A +
Sbjct: 61 ----------IEAGYLAQTGGSSLTDPAMPVSGADLQGTDIPTSYVPFRNAGFLSMAVSW 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
+ +G I IG E D SGYPDCR A I LG ++ + + TPL+ ++K +
Sbjct: 111 SEVIGAGKIFIGAVEEDSSGYPDCRQVFYDAFNRVIELGTRPDTAIEIVTPLISMQKCDI 170
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++ N S +CY + G C C +C R + +
Sbjct: 171 VLKGMEL------NAPFACSWSCYKSE-------GRACGVCDSCARRLRAFE 209
>gi|159905116|ref|YP_001548778.1| exsB protein [Methanococcus maripaludis C6]
gi|254764359|sp|A9A873|QUEC_METM6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|159886609|gb|ABX01546.1| exsB protein [Methanococcus maripaludis C6]
Length = 233
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A + T++F+YGQ + L + KKI E++
Sbjct: 2 KAICVLSGGLDSAVTSLVAKSENYDITTVTFNYGQ---MALNQEIKSAKKISEILN---- 54
Query: 70 SLGEDHILPLAILGDISHSS-LTKNVAMKIQDN---------NLPNTFVPGRNIIFLVFA 119
++H++ + + S S T N+ +++ + +VP RN+I A
Sbjct: 55 --ADNHVIDINFVKKFSKSGLNTGNIPEPEKEDLDDFEKSEKTMKAVWVPARNMIMFSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A + I G+ + + +PD + I ++ G + V + PL L K E
Sbjct: 113 SGFAEGIDAEKIFSGLNKEEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYKLNKPE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
KL +++ + + +I + S++CY R+ C +C +C R++ + E
Sbjct: 173 IAKLGKELELKLDLEVI-KYSYSCYRDNREDY----LHCGTCESCMRRKRAFKEAG 223
>gi|301167719|emb|CBW27303.1| putative transcriptional regulatory protein [Bacteriovorax marinus
SJ]
Length = 233
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 28/238 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKK 59
M++ K A++L SGG DS + A ++ R+ L +YGQ+ + EL+C
Sbjct: 1 MSE--KSNELAVVLVSGGMDSLVTAAMANEKHQRMAFLHLNYGQKTQDRELKC------- 51
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIF 115
E+ + I+ ++ L I SSLT + K +P+++VP RN
Sbjct: 52 FNEIADHYNVPKSLRKIIDISFLSQIGGSSLTDDSIDVKDYKGDSEEIPDSYVPFRNTHI 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMW 174
+ A + + +G I IG D SGYPDCR +A+ I G + + V TP++
Sbjct: 112 VAMAVSWSEVVGAKKIYIGAVYEDSSGYPDCRPSYYQALNNLIKEGTKDGDIEVVTPVIH 171
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+KK E K A + L S++CY C C +C LR +G+
Sbjct: 172 MKKEEIVKKAISLQA------PLSSSYSCYARGDK-------ACGICDSCALRLRGFQ 216
>gi|16273113|ref|NP_439347.1| hypothetical protein HI1191 [Haemophilus influenzae Rd KW20]
gi|1574118|gb|AAC22844.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
Length = 196
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 18/198 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+++FSGGQDS+TCL A+ + + +E ++F YGQR+ +ELE + + +
Sbjct: 10 RKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQDLG----- 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ +++ I+H++L A ++ ++N LPNTFV GRN +FL++AA A
Sbjct: 65 -----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKG 119
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-HTPLMWLKKYETWKLA 184
GI +I+ GVCETD+SGYPDCR I+++ +NL M+ + + TPLM+L K +TW+LA
Sbjct: 120 QGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPIPISKTPLMYLTKAQTWQLA 179
Query: 185 QDIGGQDLVNLILEESHT 202
+ L ++++
Sbjct: 180 DEFRRIRL----CTKTYS 193
>gi|299142692|ref|ZP_07035822.1| ExsB protein [Prevotella oris C735]
gi|298575907|gb|EFI47783.1| ExsB protein [Prevotella oris C735]
Length = 217
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 93/234 (39%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L D +SFDYG + K +
Sbjct: 2 KDSVIIVSGGMDSITLLYDKKDE--IALGISFDYGSNHNA----------KEIPFAEMHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG HI + L + SSL + D+N+ +T VP RN I L A +A
Sbjct: 50 RRLGIKHITINLDFMHRYFKSSLLEGAEAIPEGHYADDNMKSTVVPFRNGIMLSIAIGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ ++I D++ YPDCR + I+AI+ A G + V P + K + ++
Sbjct: 110 ESNNLKKVLIANHGGDHTIYPDCRPEFIKAIDAAAYAGTFVNTHVEAPYTNITKGDIARI 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G L E+ +CY G C C C R++ E K
Sbjct: 170 GKKLG------LDYTETWSCYKGGDK-------HCGKCGTCIERKEALAEAGIK 210
>gi|57642198|ref|YP_184676.1| ExsB family transcriptional regulator [Thermococcus kodakarensis
KOD1]
gi|74505472|sp|Q5JHU5|QUEC_PYRKO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|57160522|dbj|BAD86452.1| predicted transcription regulator, ExsB family [Thermococcus
kodakarensis KOD1]
Length = 239
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 28/238 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+ CL WA +D V L+ +YG + V K+ E K
Sbjct: 2 KRAVVLFSGGLDSTACLYWAKKNYDEVIMLTVNYGSNEEK-------VTNKVAEFFSKEL 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-------------MKIQDNNLPNTFVPGRNIIF 115
D I+ L L + S T V +++ + +VP RN++
Sbjct: 55 D--VPLKIVRLDFLEEFSKLRGTTLVGGETPKVTGEELENIEVAQETAKSVWVPARNVVL 112
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+L LG +IV+G + + +PD + + + + G + V V PL+ L
Sbjct: 113 IAVAASLLDALGGGDIVVGFNAEEGATFPDNTPEFVEKMNEMLKYGTMAEVRVVAPLINL 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K KL +++G + E S++CY+ K C C +C R +G +E
Sbjct: 173 DKRGIAKLLKELGAK------YEYSNSCYMPKGFTEDGKPIHCGECESCVRRHRGLIE 224
>gi|194333515|ref|YP_002015375.1| exsB protein [Prosthecochloris aestuarii DSM 271]
gi|254764366|sp|B4S6H3|QUEC_PROA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|194311333|gb|ACF45728.1| exsB protein [Prosthecochloris aestuarii DSM 271]
Length = 226
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 35/232 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A++L SGG DS + A + + +YGQR EL +
Sbjct: 2 RAVVLLSGGMDSLVATAEADALGYELAAMHVNYGQRTWHKELMAFRAI-----------C 50
Query: 69 DSLGEDHIL--PLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAAT 121
D G H L L I SSLT + ++ +++ + +P ++VP RN FL A
Sbjct: 51 DHYGIRHRLEVDADYLSAIGGSSLT-DPSIPVEEADLHGATIPTSYVPFRNASFLSMAVA 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYE 179
+ +G I IG E D SGYPDCR A I LG E+ + + TPL+ L+K
Sbjct: 110 WSEVIGAEKIYIGAVEEDSSGYPDCRKVFYDAFNRVIELGTRPETAIGIETPLIELQKSA 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + + S +CY + G C C +C R + +
Sbjct: 170 IVRRGIAL------QVPFRLSWSCYKSE-------GKACGHCDSCARRLRAF 208
>gi|188997266|ref|YP_001931517.1| exsB protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|254764388|sp|B2V5L9|QUEC_SULSY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|188932333|gb|ACD66963.1| exsB protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 222
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + ++L SGG DS+ L + F V T+S+ YGQ++ +ELE + K
Sbjct: 1 MLKKENIIVLLSGGMDSAVLLWLSKTIFKDVYTISYSYGQKHSIELEYAKELSK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ E I+ + L + S+LT + + + P T VP RN+IFL AA+
Sbjct: 55 ---IAGVKEHFIVEVPHLKQLKGSALTDENLEIPSENYPDEPPITTVPMRNLIFLSIAAS 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWL 175
A I NI IG+ D S YPDCR + + E IN ++ + + TP + +
Sbjct: 112 FADVYEIENIGIGIHSLD-SPYPDCRAEFASSAEAVINASSVMVAKKKNRIKIFTPFLGM 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + KL +++G + E++++CY G C C C R++ E
Sbjct: 171 SKTDIAKLGRELG------VPFEKTYSCYKGTVPP-------CGECATCRQREEALRE 215
>gi|288802312|ref|ZP_06407752.1| ExsB protein [Prevotella melaninogenica D18]
gi|288335279|gb|EFC73714.1| ExsB protein [Prevotella melaninogenica D18]
Length = 218
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L + +SFDYGQ + K +
Sbjct: 2 KDSVIIVSGGLDSITLLYDKAET--IALAISFDYGQNHGA----------KELPYAQYHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ LG HI +PL+ + SSL ++ N+ +T VP RN I L A +A
Sbjct: 50 EKLGIPHITIPLSFMHQYFKSSLLDGADAIPEGHYEEENMKSTVVPFRNGIMLAIATGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + I D++ YPDCR + I A+ A G V V P + K E
Sbjct: 110 ESHELKRVYIANHGGDHTIYPDCRPEFIHAMNGATEAGTFVKVRVEAPYTEITKAEIVAR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + ++ +CY G C C C R++ + K
Sbjct: 170 GAALG------IDYSKTWSCYKGAD-------IHCGKCGTCVERKEAFEAAGVK 210
>gi|302346706|ref|YP_003815004.1| protein ExsB [Prevotella melaninogenica ATCC 25845]
gi|302150631|gb|ADK96892.1| protein ExsB [Prevotella melaninogenica ATCC 25845]
Length = 218
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L + +SFDYGQ + K +
Sbjct: 2 KDSVIIVSGGLDSITLLYDKAET--IALAISFDYGQNHGA----------KELPYAQYHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ LG HI +PL+ + SSL ++ N+ +T VP RN I L A +A
Sbjct: 50 EKLGIPHITIPLSFMHQYFKSSLLDGADAIPEGHYEEENMKSTVVPFRNGIMLAIATGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + I D++ YPDCR + I A+ A G V V P + K E
Sbjct: 110 ESHELKRVYIANHGGDHTIYPDCRPEFIHAMNGATEAGTFVKVRVEAPYTEITKAEIVAR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + ++ +CY G C C C R++ + K
Sbjct: 170 GAALG------IDYSKTWSCYKGAD-------IHCGKCGTCVERKEAFEAAGVK 210
>gi|195952408|ref|YP_002120698.1| exsB protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932020|gb|ACG56720.1| exsB protein [Hydrogenobaculum sp. Y04AAS1]
Length = 216
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 34/232 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+T L A +F +SFDYGQ++ VEL+ + + +
Sbjct: 5 LVLLSGGMDSATLLWEAKKKFKDAYAISFDYGQKHIVELKYAKELANMV---------GI 55
Query: 72 GEDHILPLAILGDIS-----HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
E I+ + +I+ S K + + ++P T+VP RN+ FL A+ +A L
Sbjct: 56 KEHFIVKIPHYKEINFHSPLLSVSKKEIPKESYQEDVPITYVPMRNLTFLAIASGIADEL 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWLKKYET 180
GI NI I V D + YPDCR + I + E AIN G + + V+ P + K +
Sbjct: 116 GIENIGIAVHAVD-APYPDCRPEFITSAEAAINAGSSFVVKTKKRIYVYAPFLGFSKKDI 174
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
KL + +G + +++++CY G C C C R++
Sbjct: 175 AKLGKTLG------VPFDKTYSCYEGTEPP-------CGECATCIQRKEALE 213
>gi|281425182|ref|ZP_06256095.1| ExsB protein [Prevotella oris F0302]
gi|281400648|gb|EFB31479.1| ExsB protein [Prevotella oris F0302]
Length = 217
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L D +SFDYG + K +
Sbjct: 2 KDSVIIVSGGMDSITLLYDKKDE--IALGISFDYGSNHNA----------KEIPFAEMHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG HI + L + SSL + D N+ +T VP RN I L A +A
Sbjct: 50 RRLGIKHITINLDFMHRYFKSSLLEGAEAIPEGHYADENMKSTVVPFRNGIMLSIAIGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ ++I D++ YPDCR + I+AI+ A G + V P + K + ++
Sbjct: 110 ESNNLKKVLIANHGGDHTIYPDCRPEFIKAIDAAAYAGTFVNAHVEAPYTNITKGDIARI 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G L E+ +CY G C C C R++ E K
Sbjct: 170 GKQLG------LDYTETWSCYKGGDK-------HCGKCGTCVERKEALAEAGIK 210
>gi|254467069|ref|ZP_05080480.1| exsB protein [Rhodobacterales bacterium Y4I]
gi|206687977|gb|EDZ48459.1| exsB protein [Rhodobacterales bacterium Y4I]
Length = 233
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + +SFDYGQR++ EL+ K++
Sbjct: 2 KTIVICSGGLDSVSLAHMVAEEHQLTRLVSFDYGQRHRKELDYAAAAAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G +S S+LT ++ + + + T VP RN I L A +A
Sbjct: 54 --VPHDIIDMRGIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR A + ++ V ++TP + K +
Sbjct: 112 NGDDAVATAVHGGDHFIYPDCRPAFTEAFDAMQRAALDGYADVRLYTPFVHRTKGDIVTA 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
N E+ +CY G C C C R++ +
Sbjct: 172 G------AKHNTPFAETWSCYKGGEK-------HCGRCGTCVERREAF 206
>gi|149197765|ref|ZP_01874814.1| exsB protein [Lentisphaera araneosa HTCC2155]
gi|149138986|gb|EDM27390.1| exsB protein [Lentisphaera araneosa HTCC2155]
Length = 226
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 94/236 (39%), Gaps = 32/236 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A +L SGG DS+T L + +D V LSFDYGQ++ EL + E
Sbjct: 2 KKAAVLISGGLDSTTLLHHVIKSLGYDEVYALSFDYGQKHSRELIVAKAQCDSLPE---- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLT---------KNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ E ++L ++ +GD SS + D + P T+VP RN++ L
Sbjct: 58 ----VKEHNVLDISYMGDFLGSSSALVKGGVEVPDLKDIAEGDLDQPVTYVPNRNMMLLS 113
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
AA+ A + G D GY DC + + +L + V V P + + K
Sbjct: 114 IAASFAESRDCRQLYYGAQAQDEYGYWDCTESFLARMNDVFSLNRRTGVHVEAPFVNMSK 173
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K+ +G + ++ TCY G C CP+C R + E
Sbjct: 174 GHVAKIGLALG------IDYAQTWTCYRGGDKP-------CEVCPSCVERALAFKE 216
>gi|148240805|ref|YP_001226192.1| PP-loop superfamily ATPase [Synechococcus sp. WH 7803]
gi|189029541|sp|A5GPN0|QUEC_SYNPW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|147849344|emb|CAK24895.1| Predicted PP-loop superfamily ATPase [Synechococcus sp. WH 7803]
Length = 229
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 20/229 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A+ L SGG DS+T + A + RV LSFDYGQR++ E
Sbjct: 8 TAIALLSGGLDSATAAALAQEAGCRVIGLSFDYGQRHRRE---------LQAAAAIAEAL 58
Query: 70 SLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L E H + LA G S + + + + +QD +P+T+VPGRN +F+ +LA
Sbjct: 59 NLAEHHTISVNLASWGGSSLTDSAQALPVDGVQDGVIPSTYVPGRNTVFISIGLSLAEAR 118
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G +V+GV DYSGYPDCR D + A +T +L + P +W E W +
Sbjct: 119 GADRLVLGVNAVDYSGYPDCRPDYLDAFQTLADLSSKVGREGRGPRLWAPLVE-WSKQKI 177
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + + +E S +CY G + C C +C +R
Sbjct: 178 VEEALRLGVPIERSWSCYSGGD-------HPCGVCDSCRIRDAALQAAG 219
>gi|86136123|ref|ZP_01054702.1| ExsB [Roseobacter sp. MED193]
gi|85826997|gb|EAQ47193.1| ExsB [Roseobacter sp. MED193]
Length = 233
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + +SFDYGQR++ E+ K++
Sbjct: 2 KTLVICSGGLDSVSLAHITANEHQLTRLVSFDYGQRHRKEIYFAEAAAKRLGVPF----- 56
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ + +G ++ S+LT ++ + ++ + T VP RN I L +A
Sbjct: 57 -----HLIDMRGVGASLTGSALTDDIDVPDGHYEEETMRATVVPNRNAIMLSIGFGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR RA + ++ + V +HTP + K E +
Sbjct: 112 KGDEAVATAVHGGDHFIYPDCRPSFTRAFDAMQQAALDGYAEVRLHTPFVEHSKAEIVRQ 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++ +CY G + C C C R++ +
Sbjct: 172 G------AKHDTPFAQTWSCYKGNK-------VHCGRCGTCVERREAF 206
>gi|171914503|ref|ZP_02929973.1| exsB protein [Verrucomicrobium spinosum DSM 4136]
Length = 226
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 28/231 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L SGG DS T L WA + +SFDYG ++ K + +
Sbjct: 2 KTLVLLSGGMDSVTALYWAARETEVAGCVSFDYGSKHNA----------KEIPMAAWHAQ 51
Query: 70 SLGEDH-ILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG H ++ L + + S L K+ ++ ++ T VP RN I L A LA
Sbjct: 52 QLGVRHDVIRLDFMDQLFASDLLKSGGDIPDGHYEEQSMKRTVVPFRNGIMLAIACGLAE 111
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+VI D++ YPDCR ++++ +A+ G + V + P + K KL
Sbjct: 112 SQEAGGVVIAAHSGDHAIYPDCREPFMQSMASAMMCGTYAQVELLRPFIAQDKAGIAKLG 171
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
G + + +CY G C +C C R++ + +
Sbjct: 172 TAYG------VDFSHTWSCYKGGD-------IHCGTCGTCVERREAFQDAG 209
>gi|291547691|emb|CBL20799.1| preQ(0) biosynthesis protein QueC [Ruminococcus sp. SR1/5]
Length = 227
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 26/232 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGG DS+TCL A++++ + V L+ YGQ++ E+E +K E
Sbjct: 2 KALVLASGGVDSTTCLGLAVNKYGKENVIALTVAYGQKHTKEIEAA----RKTAEYYEVE 57
Query: 68 KDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L + I + + HS + +K D + +T+VP RN +FL AA++
Sbjct: 58 HLYLDLEPIFRYSDCSLLKHSDREIPHESYAEQLKETDGSPVSTYVPFRNGLFLSSAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + I G D +G YPDC AI AI G + V P + K E
Sbjct: 118 ALSKNCSVIYYGAHADDAAGNAYPDCSSAFHNAINEAIYQGSGGQLKVEAPFVSCTKAEV 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K ++ N+ E + +CY G C C C R + +
Sbjct: 178 VKTGLEL------NVPYELTWSCYEGGEKP-------CGVCGTCIDRAEAFR 216
>gi|260463747|ref|ZP_05811945.1| exsB protein [Mesorhizobium opportunistum WSM2075]
gi|319785231|ref|YP_004144707.1| exsB protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|259030601|gb|EEW31879.1| exsB protein [Mesorhizobium opportunistum WSM2075]
gi|317171119|gb|ADV14657.1| exsB protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 232
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 29/229 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + LSFDYGQR+ EL+ +++
Sbjct: 2 KTLVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHSKELKFATLCAQRLD-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G + S+LT V + ++ + T VP RN I L A LA
Sbjct: 54 --IAHQIIDIRQIGRGLCGSALTDGVDVPDGHYAEDTMKITVVPNRNAIMLAIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + + D+ YPDCR I A +T + ++ + ++TP + L K +
Sbjct: 112 QQLEAVGMAAHGGDHFIYPDCRPAFIEAFQTMQDRALDGDAQIRLYTPYVNLTKADIV-- 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
G ++ +CY G C C C R++ +
Sbjct: 170 ----GDGARHGTPFAQTWSCYKGGE-------RHCGRCGTCVERREAFQ 207
>gi|325291197|ref|YP_004267378.1| exsB protein [Syntrophobotulus glycolicus DSM 8271]
gi|324966598|gb|ADY57377.1| exsB protein [Syntrophobotulus glycolicus DSM 8271]
Length = 231
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 30/239 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV- 61
++K A++L SGG DS+ C A F + V L+ YGQ++ E++ V + +
Sbjct: 1 MEKKRKAVVLLSGGLDSTICAVLACREFGAENVIALTLFYGQKHAREIKSAEAVCEHLGI 60
Query: 62 -----ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
E +P G + P ++++ L++ + T+VP RN FL
Sbjct: 61 PEHYTESLPDIFRGAGSTLVDPDKPNPEMTYEELSQAY-------GISPTYVPFRNANFL 113
Query: 117 VFAATLAYRLGITNIVIGVCETDYS--GYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A T+A I G D YPDC + ++ +AI +G V + TPL W
Sbjct: 114 SVATTVALVKEADTIFYGAHAEDARNWAYPDCTPEFNGSMASAIYIGSYLKVRLVTPLQW 173
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K + L VN E + +CY G+ C C C R + + E
Sbjct: 174 LTKKDIVALGI------TVNAPFELTWSCYNGQEK-------ACGVCSTCVGRLQAFQE 219
>gi|323141811|ref|ZP_08076677.1| protein ExsB [Phascolarctobacterium sp. YIT 12067]
gi|322413703|gb|EFY04556.1| protein ExsB [Phascolarctobacterium sp. YIT 12067]
Length = 245
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 17/231 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-VEL 63
++ L+L SGG DSSTCL+ A +++ D V LS YGQ++ EL + VEL
Sbjct: 17 EEKMKVLVLLSGGVDSSTCLALAKEKYGDNVLALSMSYGQKHAKELAAAQAIADYYHVEL 76
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + L + S + +K +T+VP RN +FL AA++A
Sbjct: 77 LHMDLSKIFAHSKCSLLQGSEESVPHASYAEQLKESKGEPVSTYVPFRNGLFLSAAASIA 136
Query: 124 YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
I G D +G YPDC + ++ A+ LG V + P + K +
Sbjct: 137 LEYECNEIYYGPHADDAAGNAYPDCSVEFNESMNLAVYLGSGRKVRLVAPFVDKTKKDIV 196
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + E + +CY G C+ C C R+ +
Sbjct: 197 AEGLRLG------VPYELTWSCYDGDEKP-------CHKCGTCIDREAAFA 234
>gi|260437275|ref|ZP_05791091.1| ExsB protein [Butyrivibrio crossotus DSM 2876]
gi|292810585|gb|EFF69790.1| ExsB protein [Butyrivibrio crossotus DSM 2876]
Length = 227
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 26/232 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGG DS+TCL A+D++ + V +LS YGQ++ ELE V K
Sbjct: 2 RALVLSSGGVDSTTCLGMAVDKYGKENVVSLSVFYGQKHTKELEAATKVAK----YYGVE 57
Query: 68 KDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ I + +SHS+ + ++ D +T+VP RN +FL AA++
Sbjct: 58 HMAIDLSLIFKDSDCSLLSHSTEKIPHESYAEQLEKTDGKPVSTYVPFRNGLFLATAASI 117
Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A I G D +G YPDC A+ TA+ G + + PL+ K
Sbjct: 118 ALSKKCDVIYYGAHADDAAGNAYPDCSEVFYNAMNTAVYEGSGRQLKIEAPLVTWNKATV 177
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K ++ + E + +CY G C C C R K +
Sbjct: 178 VKKGLEL------KVPYELTWSCYEGGDKP-------CMKCGTCIDRMKAFE 216
>gi|313205278|ref|YP_004043935.1| exsb protein [Paludibacter propionicigenes WB4]
gi|312444594|gb|ADQ80950.1| exsB protein [Paludibacter propionicigenes WB4]
Length = 214
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
++L+SGG DSS L DR R L+F+YG ++ E+E K++
Sbjct: 2 KDIVILYSGGMDSSVALYEHADRIRR--ALTFNYGSKHNLREMEYAARNCKRLG------ 53
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
E H++ L + S L ++ +D N+ T VP RN I L AA +A
Sbjct: 54 ----IEHHVIELDMNKMGFVSDLLQSGGDIPNGHYEDQNMIKTVVPFRNGIMLSIAAGIA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+G ++I D++ YPDCR + I+ + AI+LG +H + P L K E +
Sbjct: 110 ESIGCDKLMISNHAGDHAIYPDCREEFIQTMNKAISLGTYNHCEILAPYTNLTKREIALI 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
++IG + E++++CY G C +C C R++G F
Sbjct: 170 GKEIG------VPFEDTYSCYNGLET-------HCGTCGTCTERKEGLEGF 207
>gi|254512926|ref|ZP_05124992.1| exsB protein [Rhodobacteraceae bacterium KLH11]
gi|221532925|gb|EEE35920.1| exsB protein [Rhodobacteraceae bacterium KLH11]
Length = 232
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS + ++ D +SFDYGQR+ EL+ ++
Sbjct: 5 LVCSGGLDSVSLAHVLANQGDLSRLVSFDYGQRHTKELDFAAACATRLG----------V 54
Query: 73 EDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
H++ L +G ++ S+LT ++ + ++ + T VP RN I L A +A
Sbjct: 55 PHHVIDLRSVGATLTGSALTDDLDVPDGHYEEETMKVTVVPNRNAIMLTIAYGIAAANKD 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQD 186
+ V D+ YPDCR D A + ++ + V +H P + K +
Sbjct: 115 DAVATAVHGGDHFIYPDCRPDFTDAFDAMQRAALDGYAEVALHVPFVHRAKADIVTEG-- 172
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
VN +++ +CY G C C C R++ +
Sbjct: 173 ----ARVNTPFDQTWSCYKGGD-------LHCGRCGTCVERREAF 206
>gi|254432181|ref|ZP_05045884.1| exsB protein [Cyanobium sp. PCC 7001]
gi|197626634|gb|EDY39193.1| exsB protein [Cyanobium sp. PCC 7001]
Length = 225
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 34/242 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ P+ + L SGG DS+T + A++ RV LSFDYGQR++ EL + +
Sbjct: 1 MATTPPTTIALLSGGLDSATAAALAIEAGHRVIGLSFDYGQRHRRELLAANAIAGAL--- 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVF 118
+L E H + + L S+LT + A+ + + +P+T+VPGRN +F+
Sbjct: 58 ------NLAEHHTIAV-NLAAWGGSALT-DPALPVPQDGTAEGVIPSTYVPGRNTVFIAL 109
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLM 173
+LA G +V+GV DYSGYPDCR D + A +T +L + V + PL+
Sbjct: 110 GLSLAEARGAGRLVLGVNAVDYSGYPDCRPDYLEAFQTLADLASKAGREGRGVRLWAPLV 169
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K A +G + + + +CY G C C +C +R +E
Sbjct: 170 QWSKTRIVTEALRLG------VPIASTSSCYSGGDRP-------CGVCDSCRIRDAALIE 216
Query: 234 FK 235
Sbjct: 217 AG 218
>gi|237755832|ref|ZP_04584430.1| ExsB protein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691997|gb|EEP61007.1| ExsB protein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 222
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + ++L SGG DS+ L + F V +S+ YGQ++ +ELE + K
Sbjct: 1 MLKKENIIVLLSGGMDSAVLLWLSKTMFKDVYAISYSYGQKHSIELEYAKELSK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ E I+ + L + ++LT + + + P T VP RN+IFL AA+
Sbjct: 55 ---IAGVKEHFIVEVPHLKQLKGNALTDENLEIPSENYPDEPPITTVPMRNLIFLSIAAS 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWL 175
A I NI IG+ D S YPDCR + + E IN ++ + + TP + +
Sbjct: 112 FADVYEIENIGIGIHSLD-SPYPDCRAEFASSAEAVINASSVMVAKKKNRIKIFTPFLGM 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K + KL +++G + E++++CY G C C C R+ E
Sbjct: 171 GKTDIAKLGRELG------VPFEKTYSCYKGTVPP-------CGECATCRQREDALREA 216
>gi|83953728|ref|ZP_00962449.1| hypothetical protein NAS141_05873 [Sulfitobacter sp. NAS-14.1]
gi|83841673|gb|EAP80842.1| hypothetical protein NAS141_05873 [Sulfitobacter sp. NAS-14.1]
Length = 233
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + +SFDYGQR++ EL+ K++
Sbjct: 2 KTIVICSGGLDSVSLAHMVAAKRKLTGLVSFDYGQRHRKELDYAALCAKRLD-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 54 --VPHDIIDMRGIGAALTGSALTDDVDVPDGHYAEETMRVTVVPNRNAIMLTVAYGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR D +A E + ++ V+++TP + K +
Sbjct: 112 RGDQAVATAVHGGDHFIYPDCRPDFTQAFEFMQYMALDGYADVSLYTPFVHRSKADIVTE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
Q N E+ +CY G + C C C R++ +
Sbjct: 172 GQR------HNTPFAETWSCYKGGV-------HHCGRCGTCVERREAF 206
>gi|294675227|ref|YP_003575843.1| protein ExsB [Prevotella ruminicola 23]
gi|294471644|gb|ADE81033.1| protein ExsB [Prevotella ruminicola 23]
Length = 217
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 93/232 (40%), Gaps = 30/232 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS+T L +R +SFDYG + K +
Sbjct: 2 KDSIIILSGGMDSTTLLYDYQER--IALAISFDYGSNHNA----------KEIPFAKYHC 49
Query: 69 DSLGEDH-ILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ LG H ++PL +G+ SSL N+ +T VP RN I L A +A
Sbjct: 50 EQLGIKHLVIPLKFMGEYFRSSLLSGDEAIPEGHYASENMKSTVVPFRNGIMLAVATGMA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ +++ D++ YPDCR + + A + G + V + +P + K +
Sbjct: 110 ESNDLQYVMMANHGGDHTIYPDCRPEFVDAFDKTAQAGTFNGVRLLSPYCNMTKGQIAAR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+++G + ++ +CY G C C C R++ +
Sbjct: 170 GKELG------IDYSKTWSCYRGGDK-------HCGKCGTCVERKEALADAG 208
>gi|251771686|gb|EES52261.1| exsB protein [Leptospirillum ferrodiazotrophum]
Length = 229
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 59/241 (24%), Positives = 90/241 (37%), Gaps = 32/241 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
+ ++L SGG DS+ + A D + L YG R + E + +
Sbjct: 1 MATGGRGVVLVSGGMDSAVTAALARKECDFLGFLHVRYGGRTQRREEQSFRALCDHFRP- 59
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFA 119
I L + S+LT ++ +P T+VP RN FL A
Sbjct: 60 --------DRTLITDAPSLAAVGGSALTDGNLEIPEGDLERTGIPVTYVPFRNAHFLSVA 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMW 174
+ A L I IG E D SGYPDCR A E A LG S +++ TP++
Sbjct: 112 VSWAEVLSCDRIYIGAVEEDSSGYPDCRRSFYDAFEQAARLGTAMEMEGSSLSIVTPVIH 171
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ K E + + ++ + +CY C C +C LR +G+
Sbjct: 172 MDKGEIVRTGLSL------SVPFALTWSCYREGEK-------ACGHCDSCLLRLRGFSRA 218
Query: 235 K 235
Sbjct: 219 G 219
>gi|227820050|ref|YP_002824021.1| succinoglycan biosynthesis regulator [Sinorhizobium fredii NGR234]
gi|75440536|sp|Q6W2G5|QUEC_RHISN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|36958584|gb|AAQ87052.1| Succinoglycan biosynthesis regulator, ExsB [Sinorhizobium fredii
NGR234]
gi|227339049|gb|ACP23268.1| succinoglycan biosynthesis regulator [Sinorhizobium fredii NGR234]
Length = 236
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + + LSFDYGQR++ EL+ K++
Sbjct: 2 KTIVICSGGLDSVSLAHRIAAEHELLGLLSFDYGQRHRKELDFAAACAKRLG-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIREIGRHLTGSALTDDVDVPDGHYAEETMKTTVVPNRNAIMLAIAFGVAAT 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR I A + N +E V ++TP + + K +
Sbjct: 112 RKADAVAAAVHGGDHFIYPDCRPGFIDAFQVMQNHALEGYADVILYTPYVNVSKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E+ +CY G C C C R++ +
Sbjct: 172 G------AKHHTPFAETWSCYKGGT-------RHCGRCGTCVERREAF 206
>gi|260430380|ref|ZP_05784353.1| ExsB protein [Citreicella sp. SE45]
gi|260418409|gb|EEX11666.1| ExsB protein [Citreicella sp. SE45]
Length = 233
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + D+ +SFDYGQR++ EL+ +++
Sbjct: 2 KTLVICSGGLDSVSLAHIIADQHRLTRLVSFDYGQRHRKELDFAAAAARRLN-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ + +G +S S+LT ++ + + + T VP RN I L +A
Sbjct: 54 --VPHHLIDMRGIGASLSGSALTDDIDVPDGHYAEETMRITVVPNRNAIMLAIGFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR +A + ++ + V +HTP + K + +
Sbjct: 112 NGDEAVATAVHGGDHFIYPDCRPAFTQAFDAMQQAALDGYASVRLHTPFVERSKADIVRA 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 172 GAAHG------TPFAETWSCYKGGE-------VHCGRCGTCVERREAF 206
>gi|150401201|ref|YP_001324967.1| exsB protein [Methanococcus aeolicus Nankai-3]
gi|167016433|sp|A6UV33|QUEC_META3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|150013904|gb|ABR56355.1| exsB protein [Methanococcus aeolicus Nankai-3]
Length = 234
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 26/238 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ C++ A + +++FDYGQR ++ + KK+ EL
Sbjct: 2 KAVCVLSGGLDSAVCMAMAKSEGLELYSITFDYGQRA---VKKEIIASKKLSELFG---- 54
Query: 70 SLGEDHILPLAILGDISHSSLTKNVA------------MKIQDNNLPNTFVPGRNIIFLV 117
++ L + D S S+LTK ++ + +VP RN+I
Sbjct: 55 --AVHKVVELPFVKDFSSSALTKKEEEVPTIKNSELDNLEKATETMEKVWVPARNMILFS 112
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
++ A + I G+ + + +PD + + + + G + V + +PL K
Sbjct: 113 ISSGFAEFVDAKYIYTGLNVEEGATFPDNTEEFLNRFNSVLEYGTLNKVKMKSPLYKYSK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E K+ + + + V L+ S++CY C +C +C R++ + E
Sbjct: 173 KEIVKIGKKLEEKLNVEF-LKYSYSCY----HDNKTDFLHCGTCESCMRRKRAFKEAG 225
>gi|254474583|ref|ZP_05087969.1| exsB protein [Ruegeria sp. R11]
gi|214028826|gb|EEB69661.1| exsB protein [Ruegeria sp. R11]
Length = 232
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + +SFDYGQR++ EL+ +++
Sbjct: 2 KTLVICSGGLDSVSLAHVLAAQGQLSRLVSFDYGQRHRKELDYAAACGQRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G +S S+LT ++ + + + T VP RN I L A +A
Sbjct: 54 --VPHEIIDMRSIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G T + V D+ YPDCR A + + ++ V++ TP + K +
Sbjct: 112 KGDTAVATAVHGGDHFIYPDCRPAFTDAFDAMQRMALDGYADVSLVTPFVHRSKGDIVAA 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
VN E+ +CY G + C C C R++ +
Sbjct: 172 G------AAVNTPFAETWSCYKGGE-------HHCGRCGTCVERREAF 206
>gi|187736368|ref|YP_001878480.1| exsB protein [Akkermansia muciniphila ATCC BAA-835]
gi|187426420|gb|ACD05699.1| exsB protein [Akkermansia muciniphila ATCC BAA-835]
Length = 223
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 62/236 (26%), Positives = 97/236 (41%), Gaps = 29/236 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
+ K +A +L SGG DSS L WA LSFDY + + EL+C +
Sbjct: 1 MDKMETA-VLLSGGLDSSVALHWAHRNHRVRVALSFDYASNHAERELKCAAWQAASLG-- 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFA 119
E ++ ++ + S+L + + T VP RN IFL A
Sbjct: 58 --------IEHRVIDISSISSHLKSALLSGADDIPDGSYDEELMKQTVVPFRNGIFLSIA 109
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A +A G +VI D+S YPDCR + + A+ AI LG + + + P + + K
Sbjct: 110 AGVAESCGAQQLVIAAHSGDHSIYPDCREEFMAAMTEAIRLGTYAGLGILRPFIHMSKGG 169
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ QD+G + +++CY G C C C R++ + E
Sbjct: 170 IAAMGQDLG------VDFSRTYSCYKGGA-------VHCGVCSTCMERREAFREAG 212
>gi|282889933|ref|ZP_06298468.1| hypothetical protein pah_c008o016 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500126|gb|EFB42410.1| hypothetical protein pah_c008o016 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 221
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 69/239 (28%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS+ L+ ++ +SFDYGQR++VELE KKI +
Sbjct: 2 KAIVLLSGGLDSAVMLARLHEQQIETLAISFDYGQRHRVELE----FAKKIADFYGI--- 54
Query: 70 SLGEDHILPLAILGDISHSSLTKNVA-------MKIQDNNLPNTFVPGRNIIFLVFAATL 122
E ++P+ L S+LT + I ++P T+VP RN +FL +A
Sbjct: 55 ---EHEVIPIDPLIFRGGSALTSSATPQKGKSKEDILKQSIPFTYVPARNTLFLAYALAK 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKK 177
A G I G D+ YPDCR A + N + V + TPL+ K
Sbjct: 112 AEMHGADQIHFGSNAMDFLSYPDCRPGYFEAAQELFNRATKQSVEGKAPQIVTPLLKWTK 171
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
E K + + E + +CY G C C AC LRQ ++ E
Sbjct: 172 EEIVKEGYRL------KVPFELTSSCYD-----PTANGQPCQQCDACTLRQDAFLSISE 219
>gi|119386890|ref|YP_917945.1| exsB protein [Paracoccus denitrificans PD1222]
gi|167016441|sp|A1B9Q5|QUEC_PARDP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|119377485|gb|ABL72249.1| exsB protein [Paracoccus denitrificans PD1222]
Length = 233
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 88/228 (38%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + +SFDYGQR++ EL+ +++
Sbjct: 2 KTIVVCSGGLDSVSLAHMVAAQGGLTRLISFDYGQRHRKELDYAALAARRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ + +G ++ S+LT + + + T VP RN I L A +A
Sbjct: 54 --VPHHVIDMRGVGAVLTGSALTGGAEVPDGHYAEETMRITVVPNRNAIMLTVAFGMAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+G + V D+ YPDCR +A + + ++ + TP + K +
Sbjct: 112 MGDQAVATAVHGGDHFIYPDCRPAFTQAFQQMQDAALDGYAQARLLTPFVHRTKADIVTE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E+ +CY G C C C R++ +
Sbjct: 172 G------ARHDTPFAETWSCYKGGA-------LHCGRCGTCVERREAF 206
>gi|254246871|ref|ZP_04940192.1| hypothetical protein BCPG_01642 [Burkholderia cenocepacia PC184]
gi|124871647|gb|EAY63363.1| hypothetical protein BCPG_01642 [Burkholderia cenocepacia PC184]
Length = 156
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 75/147 (51%), Positives = 114/147 (77%)
Query: 90 LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHD 149
+T+ + ++ N LPNTFVPGRN++F+ AA +AYR G+ +V G+CETD+SGYPDCR D
Sbjct: 1 MTRMIEIETTANGLPNTFVPGRNLMFMTIAAAIAYRRGLRVLVGGMCETDFSGYPDCRDD 60
Query: 150 TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
T++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG+ LV LI E+HTCY+G+R
Sbjct: 61 TMKALQVALNLGMDTRMVLETPLMWLDKAQTWQLAEQLGGEALVELIRVETHTCYVGERA 120
Query: 210 KRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ ++WG+GC CPAC LR++G+ + +
Sbjct: 121 ELHDWGFGCGECPACKLRKRGYEAYLK 147
>gi|83942508|ref|ZP_00954969.1| hypothetical protein EE36_15747 [Sulfitobacter sp. EE-36]
gi|83846601|gb|EAP84477.1| hypothetical protein EE36_15747 [Sulfitobacter sp. EE-36]
Length = 233
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 93/228 (40%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + +SFDYGQR++ EL+ K++
Sbjct: 2 KTIVICSGGLDSVSLAHMVAANRKLTGLVSFDYGQRHRKELDYAALCAKRLD-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 54 --VRHDIIDMRGIGAALTGSALTDDVDVPDGHYAEETMRVTVVPNRNAIMLTVAYGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR D +A E + ++ V+++TP + K +
Sbjct: 112 RGDQAVATAVHGGDHFIYPDCRPDFTQAFEFMQYMALDGYADVSLYTPFVHRSKADIVTE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
Q N E+ +CY G + C C C R++ +
Sbjct: 172 GQR------HNTPFAETWSCYKGGV-------HHCGRCGTCVERREAF 206
>gi|284161581|ref|YP_003400204.1| exsB protein [Archaeoglobus profundus DSM 5631]
gi|284011578|gb|ADB57531.1| exsB protein [Archaeoglobus profundus DSM 5631]
Length = 233
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSST L + + R+D + +++ YGQR+ E+E + +K E +
Sbjct: 1 MSGGIDSSTLLWYLMKRYDEIYVITYIYGQRHAREVEHAKMIVEKAREKAKIHHEIADIS 60
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
I L G ++ + + D + T VP RN+I L A A ++G +
Sbjct: 61 CIQRLIAKGALTGNE--EVPEGFYTDESQKKTIVPNRNMILLAIAVGYAVKVGEREVYYA 118
Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
++DY+ YPDCR + ++A++TA+ L V + P + + K + KL +G
Sbjct: 119 AHKSDYATYPDCRKEFVKALDTAVYLATIFDPVVIKAPFVDMTKADIVKLGLKLG----- 173
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G+ C C C R + +
Sbjct: 174 -VPYELTWSCYRGEERP-------CLRCGTCLERTEAF 203
>gi|16120215|ref|NP_395803.1| succinoglycan biosynthesis [Halobacterium sp. NRC-1]
gi|169237475|ref|YP_001690679.1| hypothetical protein OE5195R [Halobacterium salinarum R1]
gi|74568513|sp|Q9HHN8|QUEC_HALSA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|10584341|gb|AAG20938.1| succinoglycan biosynthesis [Halobacterium sp. NRC-1]
gi|167728702|emb|CAP15546.1| hypothetical protein OE5195R [Halobacterium salinarum R1]
Length = 229
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 27/237 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A A++L SGG DS+T + A + V L YGQ + E + C + L
Sbjct: 2 SAKRAVVLASGGMDSATAAAVAHNAGYEVYMLHTSYGQ--QTEHKEHECATAQAAALGAA 59
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L DH L I SSLT + ++ + +P ++VP RN L A +
Sbjct: 60 DFLHLTTDH------LSKIGASSLTDDEMAVADADMESDEIPTSYVPFRNANLLAMATSY 113
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYET 180
A + IG D+SGYPDC+ A + + G ++ ++++ P + K +
Sbjct: 114 AEANDCEAVFIGAHSEDFSGYPDCQPAFFEAFQQTVAAGTKPDTEISINAPFVDWSKTDI 173
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++G + E + +CY + C +C AC R + + E+
Sbjct: 174 AERGLELG------VPYEHTWSCYRAEAP-------ACGTCDACAFRLQAFQNLGER 217
>gi|225847995|ref|YP_002728158.1| ExsB protein [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644692|gb|ACN99742.1| ExsB protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 219
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 32/241 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + ++L SGG DS+T L A F+ V +SF YGQ++ +E+E + K
Sbjct: 1 MIKEKNIIVLLSGGMDSATLLWLAKQNFEEVYAISFIYGQKHSIEIEYAKELAK------ 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + I+ L L + S+LT V + + P T VP RN+ FL AA
Sbjct: 55 ---IADVKQHFIVELPHLKQLGKSALTDPSLEVPSQDYTDQPPITTVPMRNLTFLSIAAA 111
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWL 175
A I NI IG+ D S YPDCR + + + ++ + ++TP + +
Sbjct: 112 FADVYEIENIGIGIHSLD-SPYPDCRAEFASAAEAAINASSVMVANKKNRIKIYTPFLGM 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + KL +G + E++++CY G C C C R++ K
Sbjct: 171 SKVDIAKLGYKLG------VPFEKTYSCYKGTNPP-------CGECATCRQREEALKSIK 217
Query: 236 E 236
E
Sbjct: 218 E 218
>gi|188994962|ref|YP_001929214.1| probable succinoglycan biosynthesis regulator ExsB protein
[Porphyromonas gingivalis ATCC 33277]
gi|254764365|sp|B2RJS2|QUEC_PORG3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|188594642|dbj|BAG33617.1| probable succinoglycan biosynthesis regulator ExsB protein
[Porphyromonas gingivalis ATCC 33277]
Length = 220
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 30/236 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVEL 63
+++ +L++ SGG DS T + R LSFDYG ++ EL +++
Sbjct: 1 MQREKDSLIVVSGGMDSVTLMYE--KRASIALALSFDYGSKHNARELSFARLHAERLG-- 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHS----SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E I+PL +G S S + + N+ +T VP RN I L A
Sbjct: 57 --------VEHLIIPLDFIGQYFQSDLLLSGGDIPEGRYDEENMKSTVVPFRNGIMLAVA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA G+ I I D++ YPDCR IR + A+ G + V + P + K +
Sbjct: 109 AGLAESRGLRRIYIANHFGDHAIYPDCRASFIRPMTEAVRCGTTNGVLIEAPYTDITKTD 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++ +G + E+ +CY G + C C C R++ +
Sbjct: 169 IARIGASLG------IDYAETWSCYKGGV-------FHCGVCGTCVERKEALHDAG 211
>gi|297621469|ref|YP_003709606.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
86-1044]
gi|297376770|gb|ADI38600.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
86-1044]
Length = 212
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 33/233 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK------IVEL 63
A++L SGG DS+ L+ A LSFDYGQR+KVELE + I+ +
Sbjct: 2 KAIVLLSGGIDSTVVLAMAQSLGRECTALSFDYGQRHKVELEHAAHIAHYYKVPQIIINI 61
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P ++ + L + + +I +P+T+VP RN +FL +AA A
Sbjct: 62 SPACFENTALVNALNVPKNRTLD----------EISKGGIPSTYVPARNTLFLAYAAGQA 111
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKY 178
+ I G D + YPDCR + A + + + + TPL+ K
Sbjct: 112 EIMNAEEIHCGPNLLDRNCYPDCRPEFYSAFQQVLASATKQGAEGNPPRIVTPLINWDKN 171
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + +G L+ + +CY G C C AC LRQ+
Sbjct: 172 RIVQEGRKLGA------PLDTTFSCYSP------SAGKACGMCDACILRQEAL 212
>gi|99081887|ref|YP_614041.1| ExsB [Ruegeria sp. TM1040]
gi|118574293|sp|Q1GEY7|QUEC_SILST RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|99038167|gb|ABF64779.1| ExsB [Ruegeria sp. TM1040]
Length = 233
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + ++ +SFDYGQR++ EL+ ++
Sbjct: 2 KTLVICSGGLDSVSLAHITSQKYQLTRLVSFDYGQRHRKELDFARAAATRLGVPF----- 56
Query: 70 SLGEDHILPL-AILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ + +I G +S S+LT ++ + ++ + T VP RN I L +A
Sbjct: 57 -----HLIDMRSIGGALSGSALTDDIDVPDGHYAEDTMRITVVPNRNAIMLAIGFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR RA ET ++ V +HTP + K + +
Sbjct: 112 QGDEAVATAVHGGDHFIYPDCRPGFTRAFETMQRAALDGYADVRLHTPFVEQSKADIVRA 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
N E+ +CY G C C C R++ +
Sbjct: 172 G------AAHNTPFAETWSCYKGGD-------IHCGRCGTCVERREAF 206
>gi|317473659|ref|ZP_07932948.1| ExsB protein [Anaerostipes sp. 3_2_56FAA]
gi|316898949|gb|EFV20974.1| ExsB protein [Anaerostipes sp. 3_2_56FAA]
Length = 181
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 107/177 (60%), Gaps = 13/177 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+++FSGGQDS+TCL WA +++ V LSFDYGQ++ EL C + KK
Sbjct: 1 MSKPTKAVVVFSGGQDSTTCLFWAKKKYEEVIALSFDYGQKHSDELICAKEICKKYG--- 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E +IL +A+L ++ +SLT+ V + + PN+FV GRN++FL FAA
Sbjct: 58 -------VEHYILDMALLNQLAPNSLTRADIEVDKEAPETGTPNSFVDGRNMLFLTFAAV 110
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A + I +V GV ++D+SGYPDCRH I ++ET + L M+ V TPLMW+ K
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFITSLETTLTLAMDYEFEVITPLMWIDKK 167
>gi|254469725|ref|ZP_05083130.1| exsB protein [Pseudovibrio sp. JE062]
gi|211961560|gb|EEA96755.1| exsB protein [Pseudovibrio sp. JE062]
Length = 232
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 33/241 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS T + + +SFDYGQR+K EL+ K++
Sbjct: 2 KTIVISSGGLDSVTLAYKVAREHELLGLVSFDYGQRHKKELDYAAHAAKQLG-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
HIL ++ +G +S S+LT +V + + N+ T VP RN I L +A
Sbjct: 54 --VPHHILDMSQIGAHLSGSALTDDVDVPDGHYAEENMKVTVVPNRNAIMLSIGFGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR I++ E+ L ++ +V+++TP + + K
Sbjct: 112 QQADAVAAAVHGGDHFIYPDCRPGFIKSFESMQKLALDGYANVSLYTPFVEISKGAIVAE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
I N+ E++ +CY G C C C R++ + E +Y
Sbjct: 172 GARI------NVPFEDTWSCYKGGEK-------HCGRCGTCVERREAFDIAGVEDPTEYA 218
Query: 240 D 240
D
Sbjct: 219 D 219
>gi|254496018|ref|ZP_05108921.1| ExsB protein [Legionella drancourtii LLAP12]
gi|254354767|gb|EET13399.1| ExsB protein [Legionella drancourtii LLAP12]
Length = 206
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 25 LSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI--LPLAIL 82
++ A + +SF YGQR+ EL + + + E I L +
Sbjct: 1 MALAKAKGFACYAMSFSYGQRHTAELSAATRIAQHYA---------VKEHKIVTLDTQLF 51
Query: 83 GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSG 142
+ + + + V + +P T+VP RN IFL A A +G +I IG DYS
Sbjct: 52 RNSALTDASMAVPDFQESAEIPITYVPARNTIFLSMALGFAESIGARDIYIGASSVDYSH 111
Query: 143 YPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197
YPDCR + I A +T NL ++ V T+H PL L K +T +L +G +
Sbjct: 112 YPDCRPEFIAAFQTLANLATKAGVSGDPFTIHAPLQHLSKVKTIELGLSLG------VDY 165
Query: 198 EESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +CY + G C C +C R++G+
Sbjct: 166 SLTVSCYQA-----NDAGEACGQCDSCTFRKRGFANAG 198
>gi|163738315|ref|ZP_02145730.1| ExsB [Phaeobacter gallaeciensis BS107]
gi|161388236|gb|EDQ12590.1| ExsB [Phaeobacter gallaeciensis BS107]
Length = 232
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + +SFDYGQR++ EL+ +++
Sbjct: 2 KTLVICSGGLDSVSLAHVLAAKGQLSRLVSFDYGQRHRKELDYAAACGQRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G +S S+LT ++ + + + T VP RN I L A +A
Sbjct: 54 --VPHEIIDMRSIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G T + V D+ YPDCR A + + ++ V + TP + K +
Sbjct: 112 KGDTAVATAVHGGDHFIYPDCRPAFTDAFDVMQRMALDGYADVALVTPFVHRSKGDIVAA 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
V E+ +CY G + C C C R++ +
Sbjct: 172 G------AAVKTPFAETWSCYKGGE-------HHCGRCGTCVERREAF 206
>gi|34541004|ref|NP_905483.1| exsB protein [Porphyromonas gingivalis W83]
gi|81417265|sp|Q7MV08|QUEC_PORGI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|34397319|gb|AAQ66382.1| exsB protein [Porphyromonas gingivalis W83]
Length = 220
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 30/236 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVEL 63
+++ +L++ SGG DS T + R LSFDYG ++ EL +++
Sbjct: 1 MQREKDSLIVVSGGMDSVTLMYE--KRASIALALSFDYGSKHNARELSFARLHAERLG-- 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHS----SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E I+PL +G S S + + N+ +T VP RN I L A
Sbjct: 57 --------VEHLIIPLDFIGQYFQSDLLLSGGDIPEGRYDEENMKSTVVPFRNGIMLAVA 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A LA G+ I I D++ YPDCR IR + A+ G + V + P + K +
Sbjct: 109 AGLAESRGLRRIYIANHFGDHAIYPDCRASFIRPMTEAVRCGTTNGVLIEAPYTDITKTD 168
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++ +G + E+ +CY G + C C C R++ +
Sbjct: 169 IARIGASLG------IDYAETWSCYKGGV-------FHCGVCGTCVERREALHDAG 211
>gi|261417332|ref|YP_003251015.1| exsB protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373788|gb|ACX76533.1| exsB protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302326040|gb|ADL25241.1| protein ExsB [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 217
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 63/234 (26%), Positives = 96/234 (41%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
ALL+ SGG DS T L D +SFDYG + K +
Sbjct: 2 KDALLVLSGGMDSVTLLY--DRAADIALAVSFDYGSNHN----------DKEIPFARMHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ LG HI +PL + D SSL D N+ +T VP RN I L AA LA
Sbjct: 50 EKLGIPHITIPLKFMHDYFTSSLLSGADAIPEGTYADENMKSTVVPFRNGIMLSVAAGLA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ +++ D++ YPDCR + ++ + AI+ G +++T+ P + K + +
Sbjct: 110 ESRDLKRVMMANHFGDHAIYPDCREEFVKNMSAAISAGTYANITIDAPYTNISKADIARK 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G L E+ +CY G + C C C R+ E
Sbjct: 170 GKALG------LDYSETWSCYKGGK-------IHCGKCATCLERKAALAEAGIN 210
>gi|148642996|ref|YP_001273509.1| transcription regulator-related ATPase, ExsB [Methanobrevibacter
smithii ATCC 35061]
gi|167016437|sp|A5ULR3|QUEC_METS3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|148552013|gb|ABQ87141.1| transcription regulator-related ATPase, ExsB [Methanobrevibacter
smithii ATCC 35061]
Length = 227
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 40/240 (16%)
Query: 7 KAPSALLLFSGGQDS--STCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
A+ + SGG DS +TC+ + ++F+YGQ++ K EL+ + KK+
Sbjct: 2 MTKKAITVLSGGLDSCVATCVY---AEDYEIHGITFNYGQKSFKQELKASEEICKKMG-- 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-----------IQDNNLPNTFVPGRN 112
++ L L IS+SSLT + + I ++ + +VPGRN
Sbjct: 57 --------FTHEVIDLPWLNKISNSSLTSDNEIPTLTHEELDDLDICEDTASSVWVPGRN 108
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
I+F A + A +G I++G + + + +PD + + + +N+G ++ + P
Sbjct: 109 IVFTSIATSYAESIGAEIIIVGWDKEEAATFPDNSKEFLESFNNMLNVGSPQNIEIKAPA 168
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K E KL +I +E S++CY G C C +C R++ +
Sbjct: 169 IDLNKDEIVKLGDEIKA------PMELSYSCYTGHEK-------HCGVCESCMRRKRAFK 215
>gi|298250153|ref|ZP_06973957.1| exsB protein [Ktedonobacter racemifer DSM 44963]
gi|297548157|gb|EFH82024.1| exsB protein [Ktedonobacter racemifer DSM 44963]
Length = 252
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ SA+L+ SGG DS + + LSF+YGQ++ EL + I L
Sbjct: 5 RRGESAVLIVSGGMDSCVLSHYYAAAGFDLHLLSFNYGQKHVKELTYAE---RYISALRE 61
Query: 66 KWKDSLGEDHI--LPLAILGDISHSS----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
++ + + + LP+A L S S+ D+++ T VP RN L+ A
Sbjct: 62 RYSNLEIQHQVVALPIAHLSPNSGSALLNPDQSMPHGHYTDDSMKATVVPYRNPNMLLQA 121
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKY 178
AT+A+ + DY+ YPDCR + + A T +N M+S VTV P M K
Sbjct: 122 ATVAWNENARVVAFAAHYGDYAQYPDCRQEFVDAFNTMLNRAMDSDQVTVEVPFMRFSKA 181
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + + ++ E + +CY G + + C C C R + +
Sbjct: 182 QIARFGASL------DVPFELTWSCYEGGSEGFGD--KHCGHCGTCVERYEAFKHAG 230
>gi|288869676|ref|ZP_05975624.2| ExsB protein [Methanobrevibacter smithii DSM 2374]
gi|288860993|gb|EFC93291.1| ExsB protein [Methanobrevibacter smithii DSM 2374]
Length = 227
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 40/240 (16%)
Query: 7 KAPSALLLFSGGQDS--STCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
A+ + SGG DS +TC+ + ++F+YGQ++ K EL+ + KK+
Sbjct: 2 MTKKAIAVLSGGLDSCVATCVY---AEDYEIHGITFNYGQKSFKQELKASEEICKKMG-- 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-----------IQDNNLPNTFVPGRN 112
++ L L IS+SSLT + + I ++ + +VPGRN
Sbjct: 57 --------FTHEVIDLPWLNKISNSSLTSDNEIPTLTHEELDDLDICEDTASSVWVPGRN 108
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
I+F A + A +G I++G + + + +PD + + + +N+G ++ + P
Sbjct: 109 IVFTSIATSYAESIGAEIIIVGWDKEEAATFPDNSKEFLESFNNMLNVGSPQNIEIKAPA 168
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K E KL +I +E S++CY G C C +C R++ +
Sbjct: 169 IDLNKDEIVKLGDEIKA------PMELSYSCYTGHEK-------HCGVCESCMRRKRAFK 215
>gi|313894320|ref|ZP_07827885.1| protein ExsB [Veillonella sp. oral taxon 158 str. F0412]
gi|313441144|gb|EFR59571.1| protein ExsB [Veillonella sp. oral taxon 158 str. F0412]
Length = 229
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + I+E
Sbjct: 1 MAQKQKAIVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAVA----ILE 56
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLV 117
++ + + ++ SS + + + +T+VP RN +FL
Sbjct: 57 YYGIEGKTMDVTKLFAFSNCSLLTQSSEEIPQGSYKEQQEAEGEGTVSTYVPFRNGLFLS 116
Query: 118 FAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
AA+LA L I G D +G YPDC +++ AI G ++ P +
Sbjct: 117 AAASLALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINF 176
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K + K +G + + +CY G C C C RQ +
Sbjct: 177 NKADIVKEGLRLG------VPYHLTWSCYEGGDKP-------CGHCGTCIDRQAAFQ 220
>gi|78189278|ref|YP_379616.1| ExsB [Chlorobium chlorochromatii CaD3]
gi|78171477|gb|ABB28573.1| ExsB [Chlorobium chlorochromatii CaD3]
Length = 218
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 29/224 (12%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKDSLGEDHIL 77
DS + A + + +YGQR + EL + S+ + +
Sbjct: 1 MDSLVTTAIAQQAGFELAAMHVNYGQRTMQRELNSFRAICSHY---------SIQQRLEI 51
Query: 78 PLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
LG I SSLT ++ + +P ++VP RN FL A + A +G I I
Sbjct: 52 NADFLGKIGGSSLTDLSMPVSVANLESHAIPASYVPFRNAGFLSMAVSWAEVIGAERIFI 111
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
G E D SGYPDCR A I LG E+H+ V TPL+ LKK+E + ++
Sbjct: 112 GAVEEDSSGYPDCRKIFYEAFNRVIELGTKPETHIEVVTPLIALKKWEIVRKGIEL---- 167
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ S +CY + G C C +C LR + + +
Sbjct: 168 --HAPFAFSWSCYKNE-------GQACGVCDSCALRLRAFEQAG 202
>gi|163742268|ref|ZP_02149656.1| hypothetical protein RG210_03618 [Phaeobacter gallaeciensis 2.10]
gi|161384598|gb|EDQ08979.1| hypothetical protein RG210_03618 [Phaeobacter gallaeciensis 2.10]
Length = 232
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + +SFDYGQR++ EL+ +++
Sbjct: 2 KTLVICSGGLDSVSLAHVLAAKGQLSRLVSFDYGQRHRKELDYAAACGQRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G +S S+LT ++ + + + T VP RN I L A +A
Sbjct: 54 --VPHEIIDMRSIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G T + V D+ YPDCR A + + ++ V + TP + K +
Sbjct: 112 KGDTAVATAVHGGDHFIYPDCRPAFTDAFDVMQRMALDGYADVALVTPFVHRSKGDIVTA 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
V E+ +CY G + C C C R++ +
Sbjct: 172 G------AAVKTPFAETWSCYKGGA-------HHCGRCGTCVERREAF 206
>gi|242399134|ref|YP_002994558.1| Archaeosine biosynthesis protein queC [Thermococcus sibiricus MM
739]
gi|242265527|gb|ACS90209.1| Archaeosine biosynthesis protein queC [Thermococcus sibiricus MM
739]
Length = 241
Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 24/238 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K A++LFSGG DS+ CL WA + +D V L+ +YG + V KI E K
Sbjct: 2 KMTRAVVLFSGGLDSTACLYWAKENYDEVIMLTINYGSNEEK-------VINKIAEFFSK 54
Query: 67 -WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----------FVPGRNIIF 115
L H+ L + ++L K+ +L NT +VP RN++
Sbjct: 55 ELNIPLKIIHLDFLEEFSKLRGTTLVGGETPKVTSKDLENTEKAQETAKSVWVPARNLVL 114
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+L LG +I++G + +PD + + + + G S V V PL+ L
Sbjct: 115 ISVAASLLDALGGGDIIVGFNAEEGMTFPDNTPEFVEKMNNMLKYGSMSDVKVVAPLIGL 174
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K +L ++ G + E S++CY+ K C C +C R +G ++
Sbjct: 175 SKKGIARLLKEFGAK------YEYSNSCYMPKGFTEDGKPIHCGECESCIRRHRGLVD 226
>gi|18976420|ref|NP_577777.1| succinoglycan biosynthesis regulator [Pyrococcus furiosus DSM 3638]
gi|74537535|sp|Q8U4N3|QUEC_PYRFU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|18891952|gb|AAL80172.1| succinoglycan biosynthesis regulator [Pyrococcus furiosus DSM 3638]
Length = 240
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 24/238 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++LFSGG DS+ CL WA ++D V L+ +YG + V K+ E K
Sbjct: 1 MKRRAVVLFSGGLDSTACLYWAKKQYDEVIMLTVNYGSNEER-------VTNKVAEYFSK 53
Query: 67 WKD-SLGEDHILPLAILGDISHSS----------LTKNVAMKIQDNNLPNTFVPGRNIIF 115
D L + L +I SS + ++ + ++P RN++
Sbjct: 54 ELDVRLKIVKLDFLKEFSEIRGSSLVGGEVPRVTAEELEDIEKASETARSVWIPARNLVL 113
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+L LG +I++G + + +PD + + + A+ + V V PL+ L
Sbjct: 114 ISVAASLLDALGGGDIIVGFNAEEATTFPDNSREFVEKLNEALRFATLNPVKVVAPLIDL 173
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K KL +++ N E S++CY K C C +C R KG +E
Sbjct: 174 DKRGIAKLLKEL------NAKYEYSNSCYNPKGFTEDGRPIHCGECESCVRRHKGLIE 225
>gi|269798608|ref|YP_003312508.1| exsB protein [Veillonella parvula DSM 2008]
gi|269095237|gb|ACZ25228.1| exsB protein [Veillonella parvula DSM 2008]
Length = 229
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 26/236 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + I+E
Sbjct: 1 MAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIA----ILE 56
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLV 117
++ + + ++ SS + + +T+VP RN +FL
Sbjct: 57 YYGMEGKTMDVTKLFAFSNCSLLTQSSEDIPQGSYKEQQDAEGEGTVSTYVPFRNGLFLS 116
Query: 118 FAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
AA+LA L I G D +G YPDC +++ AI G ++ P +
Sbjct: 117 AAASLALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINA 176
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + K +G + + +CY G C C C R K +
Sbjct: 177 NKADIVKEGLRLG------VPYHLTWSCYEGGDKP-------CGHCGTCIDRAKAF 219
>gi|289548574|ref|YP_003473562.1| exsB protein [Thermocrinis albus DSM 14484]
gi|289182191|gb|ADC89435.1| exsB protein [Thermocrinis albus DSM 14484]
Length = 214
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 39/239 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+L SGG DS+ L A F+ V +SFDYGQR+ VEL+ + +
Sbjct: 2 RRILVLLSGGMDSAVLLWLAKREFEEVYAISFDYGQRHSVELKYAKILAQ---------L 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ E ++ + I S+L + + P T VP RN++FL A++ A
Sbjct: 53 AGVKEHILVEVPSYRYIKGSALIDTRVEVPTGEYPTHAPPITTVPMRNLVFLAIASSFAD 112
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWL 175
L I ++ IGV D + YPDCR + I +++TA ++ V V P + +
Sbjct: 113 ALEIDHVGIGVHALD-TPYPDCRPEFITAAEAAINAASVQTATK---KTRVHVFAPFLGM 168
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K + L +++G + E++++CY G C CP C R++ +
Sbjct: 169 TKRQIALLGKELG------VPFEKTYSCYRGTEPP-------CGECPTCIQREEALRDL 214
>gi|297619989|ref|YP_003708094.1| exsB protein [Methanococcus voltae A3]
gi|297378966|gb|ADI37121.1| exsB protein [Methanococcus voltae A3]
Length = 234
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 28/236 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS+ A + + L+F+YGQ+ L+ + KKI E++
Sbjct: 2 KAICVLSGGLDSTVASLIAKQKGYDITCLTFNYGQQA---LKNEISASKKIAEILG---- 54
Query: 70 SLGEDHILPLAILGDISHSSL--TKNVAMK-----------IQDNNLPNTFVPGRNIIFL 116
E I+ L L ++ S K + + + + +VP RN+I
Sbjct: 55 --AEHKIIDLNFLSEMCELSECGLKTGDIPSISEENLDNRVVAEQTMKKVWVPARNLIMF 112
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
A+ LA + + G+ E + S +PD + + G + V + PL +
Sbjct: 113 SIASGLAEAICADYVYCGINEEEASTFPDNTMEFMDRFNKCNEYGTLNKVKLEAPLYKMN 172
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K E K ++ + + L L+ S++CY C C +C R++ +
Sbjct: 173 KDEIVKKGIELEQKLGLEL-LKYSYSCY-----HENPEFIHCGICESCMRRKRAFK 222
>gi|313906545|ref|ZP_07839875.1| exsB protein [Eubacterium cellulosolvens 6]
gi|313468614|gb|EFR63986.1| exsB protein [Eubacterium cellulosolvens 6]
Length = 227
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+T L A+ ++ + V LS YGQ++ E++ V +
Sbjct: 2 KAMVLSSGGVDSTTALGLAIKKYGKENVIALSVSYGQKHDKEIQAARAVAEYYG------ 55
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------------NTFVPGRNIIF 115
E L L+ + S+ SL K +I + + +T+VP RN +F
Sbjct: 56 ----IEQLFLDLSKIFSYSNCSLLKQSTEEIPEESYAEQIRETGGEKPVSTYVPFRNGLF 111
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
L AA+LA G + I G D +G YPDC +A+ AI G + + P +
Sbjct: 112 LSSAASLALSKGCSVIYYGAHADDSAGFAYPDCSPVFNKAMNDAIWEGSGHQLRIEAPFV 171
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K K+ ++G + E + +CY G C C C R +
Sbjct: 172 NMNKAGVVKMGLELG------VPYELTWSCYEGGETP-------CGKCGTCIDRAAAFA 217
>gi|294794492|ref|ZP_06759628.1| ExsB protein [Veillonella sp. 3_1_44]
gi|294454822|gb|EFG23195.1| ExsB protein [Veillonella sp. 3_1_44]
Length = 229
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 26/236 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + I+E
Sbjct: 1 MAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIA----ILE 56
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLV 117
++ + + + SS + + +T+VP RN +FL
Sbjct: 57 YYNMKGKTMDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTVSTYVPFRNGLFLS 116
Query: 118 FAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
AA+LA L I G D +G YPDC +++ AI G ++ P +
Sbjct: 117 AAASLALSLDCGYIYYGAHSDDAAGNAYPDCTEQFYKSMGDAIFEGSGKECSLEAPFINA 176
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + K + N+ + +CY G C C C R K +
Sbjct: 177 NKADIVKEGLRL------NVPYHLTWSCYEGGDKP-------CGHCGTCIDRAKAF 219
>gi|315231295|ref|YP_004071731.1| queuosine biosynthesis QueC-like ATPase [Thermococcus barophilus
MP]
gi|315184323|gb|ADT84508.1| queuosine biosynthesis QueC-like ATPase [Thermococcus barophilus
MP]
Length = 242
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 28/238 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+ CL WA +D V L+ +YG + K+ E K
Sbjct: 2 RRAVVLFSGGLDSTACLYWAKKNYDEVIMLTINYGSNEER-------ATNKVAEFFSKEL 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA-------------MKIQDNNLPNTFVPGRNIIF 115
+ I+ L L + S T V M+ + +VP RN++
Sbjct: 55 NIPL--KIIKLDFLEEFSKLRGTTLVGGETPRVTARDLENMERAQETAKSVWVPARNVVL 112
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+L LG +I++G + + +PD + + + + G S V V PL+ L
Sbjct: 113 ISVAASLLDALGGGDIIVGFNAEEGATFPDNTPEFVEKMNEMLRYGALSEVKVVAPLINL 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K KL +++ N E S++CY+ K C C +C R +G ME
Sbjct: 173 DKKGIAKLLKEL------NAKYEYSNSCYMPKGFTEDGKPIHCGECESCVRRHRGLME 224
>gi|282849824|ref|ZP_06259208.1| protein ExsB [Veillonella parvula ATCC 17745]
gi|282580761|gb|EFB86160.1| protein ExsB [Veillonella parvula ATCC 17745]
Length = 229
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 26/236 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + I+E
Sbjct: 1 MAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIA----ILE 56
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLV 117
++ + + + SS + + +T+VP RN +FL
Sbjct: 57 YYNMKGKTMDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTVSTYVPFRNGLFLS 116
Query: 118 FAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
AA+LA L I G D +G YPDC +++ AI G ++ P +
Sbjct: 117 AAASLALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINS 176
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + K +G + + +CY G C C C R K +
Sbjct: 177 NKADIVKEGLRLG------VPYHLTWSCYEGGDKP-------CGHCGTCIDRAKAF 219
>gi|110816248|sp|O57836|QUEC_PYRHO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
Length = 239
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 24/236 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK-W 67
++LFSGG DS+ CL WA +D V L+ +YG R V K+ E K
Sbjct: 2 KRGVVLFSGGLDSTACLYWAKRHYDEVIMLTINYGSR-------EESVMNKVAEFFSKEL 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKN----------VAMKIQDNNLPNTFVPGRNIIFLV 117
K L + L +S S+L + ++ + +VP RN++ +
Sbjct: 55 KIPLKIIRVNFLNEFSKLSGSALVEGNVPRVSASELEVIERAKETARSVWVPARNLVLIS 114
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
AA+L LG +I++G + + +PD + + + A+ + V V PL+ L K
Sbjct: 115 IAASLLDALGGGDIIVGFNKEEGETFPDNTKEFVERVNKALEYATMNKVRVVAPLIELDK 174
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +++G + E S++CY K C C +C R +G ME
Sbjct: 175 RGIARLLKELGAK------YEYSNSCYDPKGFTEDGKPIHCGRCESCVRRHRGLME 224
>gi|238018562|ref|ZP_04598988.1| hypothetical protein VEIDISOL_00389 [Veillonella dispar ATCC 17748]
gi|237865033|gb|EEP66323.1| hypothetical protein VEIDISOL_00389 [Veillonella dispar ATCC 17748]
Length = 234
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 26/239 (10%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
D++ + A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE I
Sbjct: 4 DLMAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAAS----I 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIF 115
+ ++ + + ++ S+ + + + +T+VP RN +F
Sbjct: 60 LAYYGIEGKTMDVTKLFAFSNCSLLTQSTEAIPQGSYKEQQETEGEGTVSTYVPFRNGLF 119
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
L AA+LA L I G D +G YPDC +++ AI G ++ P +
Sbjct: 120 LSAAASLALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFI 179
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K + K +G + + +CY G C C C R + +
Sbjct: 180 NHNKADVVKEGLRLG------VPYHLTWSCYEGGDKP-------CGHCGTCIDRAEAFR 225
>gi|240102410|ref|YP_002958719.1| Transcription regulator, putative, ExsB family (ExsB) [Thermococcus
gammatolerans EJ3]
gi|239909964|gb|ACS32855.1| Transcription regulator, putative, ExsB family (ExsB) [Thermococcus
gammatolerans EJ3]
Length = 239
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 16/232 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+ CL WA +D V L +YG E V + + +
Sbjct: 2 KRAVVLFSGGLDSTACLYWAKKHYDEVMMLVINYGSN---EERVTNRVAEFFSKELNVPL 58
Query: 69 DSLGEDHILPLAIL-------GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ D + + L G+ S+ + + + +VP RN++ + AA+
Sbjct: 59 KIVRLDFLEEFSKLRGTTLVGGETPRVSVKELEDENVAQETAKSVWVPARNLVLISVAAS 118
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L LG +IV+G + +PD + + + A+ G + V V PL+ L K
Sbjct: 119 LLDALGGGDIVVGFNAEEGVTFPDNTPEFVEKMNEALKYGTMAEVKVVAPLIDLDKRGIA 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+L +++ N E S++CY+ K C C +C R +G +E
Sbjct: 179 RLLKEL------NAKYEYSNSCYMPKGFTEDGKPIHCGQCESCVRRHRGLIE 224
>gi|118592127|ref|ZP_01549521.1| ExsB protein [Stappia aggregata IAM 12614]
gi|118435423|gb|EAV42070.1| ExsB protein [Stappia aggregata IAM 12614]
Length = 219
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
DS T + + +SFDYGQR+K EL+ ++ E ++
Sbjct: 1 MDSVTLAHKVAREHELIGLVSFDYGQRHKKELDYAKACADELK----------TEHILID 50
Query: 79 LAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
++ +G ++ S+LT N+ + + + T VP RN I L A +A G +
Sbjct: 51 ISNIGRQLTGSALTDNLDVPDGHYAEETMKITVVPNRNAIMLSIAFGIASARGAEAVATA 110
Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
V D+ YPDCR + ET +E +++ TP + K + +G
Sbjct: 111 VHGGDHFIYPDCRPAFTESFETMQRHALEGMGEISLFTPYVHTSKADIAAEGLRLG---- 166
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++ +CY G C C C R++ +
Sbjct: 167 --VDYRKTWSCYKGGE-------VHCGRCGTCVERREAF 196
>gi|222445233|ref|ZP_03607748.1| hypothetical protein METSMIALI_00861 [Methanobrevibacter smithii
DSM 2375]
gi|222434798|gb|EEE41963.1| hypothetical protein METSMIALI_00861 [Methanobrevibacter smithii
DSM 2375]
Length = 227
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 40/240 (16%)
Query: 7 KAPSALLLFSGGQDS--STCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
A+ + SGG DS +TC+ + ++F+YGQ++ K EL+ + KK+
Sbjct: 2 MTKKAIAVLSGGLDSCVATCVY---AEDYEIHGITFNYGQKSFKQELKASEEICKKMG-- 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-----------IQDNNLPNTFVPGRN 112
++ L L IS+SSLT + + I ++ + +VPGRN
Sbjct: 57 --------FTHEVIGLPWLNKISNSSLTSDNEIPTLTNEELDDLDICEDTASSVWVPGRN 108
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
I+F A + A +G I++G + + + +PD + + + +N+G ++ + P
Sbjct: 109 IVFTSIATSYAESIGAEIIIVGWDKEEAATFPDNSKEFLESFNNMLNVGSPQNIEIKAPA 168
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ L K E KL +I +E S++CY G C C +C R++ +
Sbjct: 169 IDLNKDEIVKLGDEIKA------PMELSYSCYTGHEK-------HCGVCESCMRRKRAFK 215
>gi|325958150|ref|YP_004289616.1| exsB protein [Methanobacterium sp. AL-21]
gi|325329582|gb|ADZ08644.1| exsB protein [Methanobacterium sp. AL-21]
Length = 228
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMP 65
A+ + SGG DS+ + + ++ L+F+YGQ+ ++E++ V K++
Sbjct: 1 MKKKAITVLSGGLDSTVASAKFRED-YQIHALTFNYGQKSAEMEIKSAKAVCKELGA--- 56
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----------LPNTFVPGRNII 114
E ++ L L ++ +S+LT ++ +++ + +VPGRN++
Sbjct: 57 -------EHTVIELPWLAELGNSALTSEESIPEPEDSELDDIESALKTAKSVWVPGRNVV 109
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
F A + A + I++G + +PD + + A T + +G + + PL+
Sbjct: 110 FTAIANSFAEAENASIIIVGWDLEEAVTFPDNSKEFLEAFNTVLEVGSFDVIKIEAPLIG 169
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K E + IG +E S++CY G Y C C +C R++ +
Sbjct: 170 MNKNEIVEYGDSIGA------PMELSYSCYKG-------LNYHCGVCESCMRRKRAFK 214
>gi|261880515|ref|ZP_06006942.1| transcription regulator ExsB [Prevotella bergensis DSM 17361]
gi|270332737|gb|EFA43523.1| transcription regulator ExsB [Prevotella bergensis DSM 17361]
Length = 242
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 88/235 (37%), Gaps = 30/235 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+++ SGG DS T L DR LSFDYG + + +
Sbjct: 25 KRDAIIIVSGGMDSITMLYEFQDR--IALGLSFDYGSNHNA----------REIPYAEMH 72
Query: 68 KDSLGEDHIL-PLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATL 122
LG HI+ PL + SSL + + + +T VP RN I L AA +
Sbjct: 73 CKRLGIPHIIIPLDFMSRYFKSSLLEGADAIPEGDYNEVGMKSTVVPFRNGIMLSIAAGM 132
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + I++ D+ YPDCR + IRA+ A G + + P + K +
Sbjct: 133 AESQNLKYIMMANHSGDHIIYPDCRPEFIRAMSKATQTGTFPGIKILAPYTDITKGDIAC 192
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G L E+ +CY G C C C R + K
Sbjct: 193 RGKALG------LDYTETWSCYKGGE-------RHCGKCGTCLERIAALKDAGIK 234
>gi|294792739|ref|ZP_06757886.1| ExsB protein [Veillonella sp. 6_1_27]
gi|294456638|gb|EFG25001.1| ExsB protein [Veillonella sp. 6_1_27]
Length = 229
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 26/236 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + A++LFSGG DS+TCL+ A++RF D V LS YGQ++ ELE + I+E
Sbjct: 1 MAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIA----ILE 56
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLV 117
++ + + + SS + + +T+VP RN +FL
Sbjct: 57 YYNMKGKTMDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTVSTYVPFRNGLFLS 116
Query: 118 FAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
AA+LA L I G D +G YPDC +++ AI G ++ P +
Sbjct: 117 AAASLALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINA 176
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + K + N+ + +CY G C C C R K +
Sbjct: 177 NKADIVKEGLRL------NVPYHLTWSCYEGGDKP-------CGHCGTCIDRAKAF 219
>gi|14590038|ref|NP_142102.1| hypothetical protein PH0085 [Pyrococcus horikoshii OT3]
gi|3256471|dbj|BAA29154.1| 269aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 269
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 24/238 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++LFSGG DS+ CL WA +D V L+ +YG R V K+ E K
Sbjct: 30 EMKRGVVLFSGGLDSTACLYWAKRHYDEVIMLTINYGSR-------EESVMNKVAEFFSK 82
Query: 67 -WKDSLGEDHILPLAILGDISHSSLTKN----------VAMKIQDNNLPNTFVPGRNIIF 115
K L + L +S S+L + ++ + +VP RN++
Sbjct: 83 ELKIPLKIIRVNFLNEFSKLSGSALVEGNVPRVSASELEVIERAKETARSVWVPARNLVL 142
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+L LG +I++G + + +PD + + + A+ + V V PL+ L
Sbjct: 143 ISIAASLLDALGGGDIIVGFNKEEGETFPDNTKEFVERVNKALEYATMNKVRVVAPLIEL 202
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K +L +++G + E S++CY K C C +C R +G ME
Sbjct: 203 DKRGIARLLKELGAK------YEYSNSCYDPKGFTEDGKPIHCGRCESCVRRHRGLME 254
>gi|307943820|ref|ZP_07659164.1| queuosine biosynthesis protein QueC [Roseibium sp. TrichSKD4]
gi|307773450|gb|EFO32667.1| queuosine biosynthesis protein QueC [Roseibium sp. TrichSKD4]
Length = 229
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS T + LSFDYGQR++ EL+C + D
Sbjct: 2 KTLVVCSGGMDSVTLAHKVQRENQLIALLSFDYGQRHRKELDCA-----------KQCAD 50
Query: 70 SLGEDHI-LPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
LG +HI + ++ +G +S S+LT ++ + ++ + T VP RN I L A +A
Sbjct: 51 DLGVEHILIDISGIGAKLSGSALTDDIDVPDGHYAEDTMKITVVPNRNAIMLTIAFGIAA 110
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWK 182
G + V D+ YPDCR + A ET +E + + ++TP + L K +
Sbjct: 111 ARGANAVAAAVHGGDHFIYPDCRPGFVEAFETMQRHALEGMNDIRLYTPFVHLSKGDIAA 170
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +G + S +CY G+ C C C R++ +
Sbjct: 171 ESARLG------VDHRTSWSCYKGEN-------LHCGRCGTCVERREAF 206
>gi|282878837|ref|ZP_06287604.1| protein ExsB [Prevotella buccalis ATCC 35310]
gi|281299045|gb|EFA91447.1| protein ExsB [Prevotella buccalis ATCC 35310]
Length = 228
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 96/235 (40%), Gaps = 30/235 (12%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K +L++ SGG DS T L R +SFDYG + +K +
Sbjct: 7 ERNKMEKDSLIIVSGGMDSITMLYEYQQR--IAIGVSFDYGSNHN----------QKEIP 54
Query: 63 LMPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLV 117
L D LG HI +PL+ + D SSL + ++ N+ +T VP RN I L
Sbjct: 55 LAKMHCDRLGIRHIVIPLSFMHDYFKSSLLEGDDAIPEGHYEEENMKSTVVPFRNGIMLA 114
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
LA + ++I D++ YPDCR + I + A+ G +T+ P + K
Sbjct: 115 VGCGLAVSNHLKYVMIANHGGDHTIYPDCRPEFIDSFSQAMAAGTFEGITILAPYTQISK 174
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
E + +G + E+ +CY G + C C C R++
Sbjct: 175 GEIALRGKKLG------INYAETWSCYKGGDKQ-------CGKCGTCVERKEALA 216
>gi|294055330|ref|YP_003548988.1| exsB protein [Coraliomargarita akajimensis DSM 45221]
gi|293614663|gb|ADE54818.1| exsB protein [Coraliomargarita akajimensis DSM 45221]
Length = 240
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 18/222 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++++SGG DS+ L + LS +YGQR+ ELE + +V++ + D
Sbjct: 2 KTVIIYSGGLDSTVLLYHLRAVGAELFALSVNYGQRHCCELERAAQIC-AVVDVPHQIAD 60
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+L + L S + + T VP RN+I L A A +
Sbjct: 61 LSSVQSLLAGSSLT----SPEIDVAEGHYTEETMKTTVVPNRNMILLALATGHALSVKAE 116
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ D++ YPDCR++ A+ A+ L + V + P + K + + ++
Sbjct: 117 SVAYAAHSGDHAIYPDCRNEFADAMAAAMALCDWNQVKLDRPFVDWTKADIVRRGAEL-- 174
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G C C C R++ +
Sbjct: 175 ----KVPFEMTWSCYKGGE-------VHCGKCGTCIERREAF 205
>gi|46204970|ref|ZP_00209643.1| COG0603: Predicted PP-loop superfamily ATPase [Magnetospirillum
magnetotacticum MS-1]
Length = 175
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 93/162 (57%), Positives = 126/162 (77%)
Query: 79 LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
+A LG+IS ++LT++ + + LPNTFVPGRN+ FL FAA LA+R G+ +IV G+CET
Sbjct: 1 MAALGEISDTALTRDSEIAFAQDGLPNTFVPGRNLAFLTFAAALAFRRGLRHIVGGMCET 60
Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
DYSGYPDCR DTI+A++ A+NLGME +HTPLMWL K +TW LA+++GG+ LV+LI+E
Sbjct: 61 DYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWLDKAQTWSLAEELGGRPLVDLIVE 120
Query: 199 ESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+SHTCYLG+R +R+ WGYGC +CPAC LR KG+ ++ D
Sbjct: 121 DSHTCYLGERGQRHAWGYGCGTCPACDLRAKGFARYRAARTD 162
>gi|212224412|ref|YP_002307648.1| Hypothetical transcription regulator [Thermococcus onnurineus NA1]
gi|212009369|gb|ACJ16751.1| Hypothetical transcription regulator [Thermococcus onnurineus NA1]
Length = 239
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 28/239 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+ CL WA +D V L+ +YG + V ++ E K
Sbjct: 2 KRAVVLFSGGLDSTACLYWAKRNYDEVIMLTVNYGSNEEK-------VTNRVAEFFSKEL 54
Query: 69 DSLGEDHILPLAILGDISHSSLT-------------KNVAMKIQDNNLPNTFVPGRNIIF 115
D I+ L L + S T + M + + +VP RN++
Sbjct: 55 D--VPLKIVRLDFLEEFSKLRGTTLVGGETPKVTAEELEDMGVAQETAKSVWVPARNVVL 112
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+L LG +I++G + + +PD + + + + G + V V PL+ L
Sbjct: 113 ISVAASLLDALGGGDIIVGFNAEEGATFPDNTPEFVERMNEMLKYGAMAEVRVVAPLIDL 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K +L +++ + E S++CY+ K C C +C R +G ME
Sbjct: 173 DKKGIAELLKEL------DAKYEYSNSCYMPKGFTEDGKPIHCGECESCVRRHRGLMEA 225
>gi|332158265|ref|YP_004423544.1| hypothetical protein PNA2_0623 [Pyrococcus sp. NA2]
gi|331033728|gb|AEC51540.1| hypothetical protein PNA2_0623 [Pyrococcus sp. NA2]
Length = 239
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 16/232 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-----VEL 63
A++LFSGG DS+ CL WA +D V L+ +YG R E V + V L
Sbjct: 2 KRAVVLFSGGLDSTACLYWAKRNYDEVIMLTINYGSR---EERVTNRVAEFFSNELNVPL 58
Query: 64 MPKWKDSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
D L E L + L G+I H S + ++I + +VP RN++ + AA+
Sbjct: 59 KIIRVDFLEEFAKLSESSLVKGNIPHVSAKELEDIEIARETARSVWVPARNLVLISIAAS 118
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L LG +IV+G + +PD + + + + S V V PL+ L K
Sbjct: 119 LLDALGGGDIVVGFNREEGRTFPDNTLEFVERVNKVLEYATMSKVKVVAPLIDLDKKGIA 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
KL ++ G + E S++CY + C C +C R +G +E
Sbjct: 179 KLLKEFGAK------YEYSNSCYDPQGFTEDGKPIHCGKCESCVRRHRGLIE 224
>gi|329723320|gb|EGG59850.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
VCU144]
Length = 155
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/159 (40%), Positives = 102/159 (64%), Gaps = 10/159 (6%)
Query: 79 LAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
+++L ++ ++LT+ ++++ D+ +PNTFVP RN++FL FA LAY++ +I+ GVCE
Sbjct: 1 MSLLSQLTPNALTQHELSIEDNDDGIPNTFVPARNLLFLSFAGALAYQIHAKHIITGVCE 60
Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197
TD+SGYPDCR I+++ ++L M+ +HTPLMWL K +TW L+ +G +++ I
Sbjct: 61 TDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQTWALSDKLG---VLDYIR 117
Query: 198 EESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ TCY G G GC CPAC+LR +G + E
Sbjct: 118 HNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 150
>gi|323345225|ref|ZP_08085448.1| transcription regulator ExsB [Prevotella oralis ATCC 33269]
gi|323093339|gb|EFZ35917.1| transcription regulator ExsB [Prevotella oralis ATCC 33269]
Length = 218
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 90/234 (38%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++++ SGG DS T L DR +SFDYG + K +
Sbjct: 2 KDSVIIVSGGMDSVTMLYEYQDR--IALGISFDYGSNHNA----------KEIPYARLHC 49
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG HI + L + SSL + + N+ +T VP RN I L A +A
Sbjct: 50 KRLGIRHIVIDLGFVHQYFKSSLLEGADAIPEGSYNEGNMKSTVVPFRNGIMLSIAVGVA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ +++ D++ YPDCR D + A+ TA G V V P + K + +
Sbjct: 110 ESHHLKYVMMANHGGDHAIYPDCRPDFVAAMSTAATAGTYEKVCVLAPYTGITKTDIARR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
Q G + E+ +CY G C C C R++ E +
Sbjct: 170 GQKFG------VNFAETWSCYKGGDK-------HCGHCGTCRERKEALAEAGIE 210
>gi|315608141|ref|ZP_07883133.1| transcription regulator ExsB [Prevotella buccae ATCC 33574]
gi|315250110|gb|EFU30107.1| transcription regulator ExsB [Prevotella buccae ATCC 33574]
Length = 217
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 59/236 (25%), Positives = 93/236 (39%), Gaps = 31/236 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
SA+++ SGG DS T L D +SFDYG + + +
Sbjct: 1 MKDSAIIV-SGGMDSITLLYDKKDE--IALGISFDYGSNHNA----------REIPFAQM 47
Query: 67 WKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
+ LG HI + L + SSL + +N+ +T VP RN I L A
Sbjct: 48 HCERLGIKHIVINLDFMHRYFKSSLLDGADAIPEGHYEADNMKSTVVPFRNGIMLSIAIG 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + ++I D++ YPDCR + I AI+ A G +V V P + K +
Sbjct: 108 IAESHNLKKVLIANHGGDHTIYPDCRPEFIHAIDKAARYGTFINVGVSAPYTDITKGQIA 167
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + +G + E+ +CY G C C C R++ E +
Sbjct: 168 SIGKRLG------IDYRETWSCYKGGV-------VHCGKCGTCIERKEALAEAGIE 210
>gi|288925099|ref|ZP_06419035.1| ExsB protein [Prevotella buccae D17]
gi|288338289|gb|EFC76639.1| ExsB protein [Prevotella buccae D17]
Length = 217
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 59/236 (25%), Positives = 93/236 (39%), Gaps = 31/236 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
SA+++ SGG DS T L D +SFDYG + + +
Sbjct: 1 MKDSAIIV-SGGMDSITLLYDKKDE--IALGISFDYGSNHNA----------REIPFAQM 47
Query: 67 WKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
+ LG HI + L + SSL + +N+ +T VP RN I L A
Sbjct: 48 HCERLGIKHIVINLDFMHRYFKSSLLDGADAIPEGHYEADNMKSTVVPFRNGIMLSIAIG 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + ++I D++ YPDCR + I AI+ A G +V V P + K +
Sbjct: 108 IAESHNLKKVLIANHGGDHTIYPDCRPEFIHAIDKAARYGTFINVGVSAPYTDITKGQIA 167
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ + +G + E+ +CY G C C C R++ E +
Sbjct: 168 SIGKRLG------IDYRETWSCYKGGV-------VHCGKCGTCIERKEALAEAGIE 210
>gi|229496734|ref|ZP_04390445.1| ExsB protein [Porphyromonas endodontalis ATCC 35406]
gi|229316280|gb|EEN82202.1| ExsB protein [Porphyromonas endodontalis ATCC 35406]
Length = 225
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 93/230 (40%), Gaps = 30/230 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPK 66
A L++ SGG DS+T L D ++FDYG ++ + E+ C +++
Sbjct: 9 ARDGLIVLSGGLDSTTLLYDYRDE--IALAVTFDYGSKHNQREIPCAQHHCRQLG----- 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATL 122
E I+PL +G S L + + N+ T VP RN I L AA L
Sbjct: 62 -----IEHLIIPLGFMGQYFRSDLLLSGGEIPLGAYNEENMQATVVPFRNGIMLSIAAGL 116
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G+ + I D++ YPDCR + AI G + V + P L K E
Sbjct: 117 AESRGLKRLFIANHFGDHNIYPDCRATFAEPMAEAILQGTSNSVELAAPYTHLSKSEIVA 176
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ +G L + +CY+G + C C C R++ +
Sbjct: 177 VGMPLG------LDYATTWSCYVGGETQ-------CGECATCRERKEAFA 213
>gi|254173289|ref|ZP_04879962.1| exsB protein [Thermococcus sp. AM4]
gi|214032698|gb|EEB73527.1| exsB protein [Thermococcus sp. AM4]
Length = 239
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 28/238 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+ CL WA +D V L +YG + V ++ E K
Sbjct: 2 KRAVVLFSGGLDSTACLYWAKKNYDEVIMLVINYGSNEER-------VTNRVAEFFSKEL 54
Query: 69 DSLGEDHILPLAILGDIS--------HSSLTKNVAMKIQD-----NNLPNTFVPGRNIIF 115
+ I+ L L + S K A +++D + +VP RN++
Sbjct: 55 N--VPLKIVRLDFLEEFSKLRGTTLVGGETPKVTAQELEDFERAKETAKSVWVPARNVVL 112
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+L LG +I++G + + +PD + + + + G + V V PL+ L
Sbjct: 113 IAVAASLLDALGGGDIIVGFNAEEGATFPDNTPEFVEKMNEMLKYGTMAEVKVVAPLIDL 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K +L +++ N E S++CY+ K C C +C R +G +E
Sbjct: 173 DKRGIARLLKEL------NAKYEYSNSCYMPKGFTEDGKPIHCGQCESCVRRHRGLIE 224
>gi|259418809|ref|ZP_05742726.1| ExsB protein [Silicibacter sp. TrichCH4B]
gi|259345031|gb|EEW56885.1| ExsB protein [Silicibacter sp. TrichCH4B]
Length = 233
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + +SFDYGQR++ E++ K++
Sbjct: 2 KTLVICSGGLDSVSLAHITANEHQLTRLVSFDYGQRHRKEVDFAEAAAKRLGVPF----- 56
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ + +G ++ S+LT ++ + + + T VP RN I L +A
Sbjct: 57 -----HLIDMRGIGGALTGSALTDDIDVPDGHYAEETMKITVVPNRNAIMLSIGFGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR RA + +E V +HTP + K E +
Sbjct: 112 QGDAAVATAVHGGDHFIYPDCRPGFTRAFDAMQRAALEGYADVRLHTPFVEHSKAEIVRQ 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G + C C C R++ +
Sbjct: 172 GAQHG------TPFAETWSCYKGGA-------FHCGRCGTCVERREAF 206
>gi|167754372|ref|ZP_02426499.1| hypothetical protein ALIPUT_02666 [Alistipes putredinis DSM 17216]
gi|167658997|gb|EDS03127.1| hypothetical protein ALIPUT_02666 [Alistipes putredinis DSM 17216]
Length = 218
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 30/234 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
++++ SGG DS T L ++ ++FDYG + K E EC +++
Sbjct: 2 KDSVIIVSGGMDSITLLHEKVEE--IALAVTFDYGSNHNKREAECAARHCQQLG------ 53
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
E I+PLA +G SSL + + N+ +T VP RN I L A LA
Sbjct: 54 ----IEHIIIPLAFIGQYFKSSLLEGADAVPEGHYEAENMKSTVVPFRNGIMLSVACGLA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ ++I D++ YPDCR + ++ A+ G V + P ++K + ++
Sbjct: 110 ESRKLSKVLIANHGGDHAIYPDCRAGFVHSMSEAMRHGTYIGVQIDAPYTGIRKSDIARI 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +G L +++CY G C C C R++ + + +
Sbjct: 170 GKRLG------LDYSTTYSCYKGGEK-------HCGKCGTCVERKEALRDAEIE 210
>gi|20804216|emb|CAD31242.1| HYPOTHETICAL CONSERVED PROTEIN [Mesorhizobium loti R7A]
Length = 232
Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL++ SGG DS + + LSFDYGQR+K EL K++
Sbjct: 2 NALVICSGGLDSVSLAHKVATEQKLIGLLSFDYGQRHKKELGFAAICAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G +S S+LT NV + ++++ T VP RN I L A +A
Sbjct: 54 --VPHQIVDIRDVGRNLSGSALTDNVDVPDGHYAEDSMRITVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR I A +T N + + + ++ P + + K +
Sbjct: 112 QKADAVATAVHGGDHFIYPDCRPAFIDAFQTMQNHALAGYADIRLYAPYVNMSKADIVSE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G C C C R++ +
Sbjct: 172 GAKYA------TPFEATWSCYKGGA-------RHCGRCGTCVERREAF 206
>gi|73667687|ref|YP_303702.1| succinoglycan biosynthesis regulator [Methanosarcina barkeri str.
Fusaro]
gi|110816232|sp|Q46G70|QUEC_METBF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|72394849|gb|AAZ69122.1| succinoglycan biosynthesis regulator [Methanosarcina barkeri str.
Fusaro]
Length = 231
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 37/243 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L S G DS L+ A + FD ++FDYGQR + E + +K+ E
Sbjct: 2 KAITLLSSGLDSVAALAIAAEDFDIEMAITFDYGQRAR---EREIEYSRKVCEYFGI--- 55
Query: 70 SLGEDHILPLAILGDISHSS---------------LTKNVAMKIQDNNLPNTFVPGRNII 114
E ++ L L +I+ +S + + +I D + +VP RN +
Sbjct: 56 ---EHRVIKLDWLSEITSTSLVNRDVEVPSLSFEDIGEAAPAEITDASAKAVWVPNRNGV 112
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
L A + A +V+G + +PD D ++A++ A ++ V + PL+
Sbjct: 113 MLNIAGSFAESRECEYLVVGFNGEEAGTFPDNSLDYVKAMDRAFFYSTQNGVKILAPLIE 172
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
L K E + A + LE S +CY G+ C C +C R + +
Sbjct: 173 LGKTEIVRRALE------AKAPLEYSWSCYRGEE-------IPCGECESCVRRARAFKNA 219
Query: 235 KEK 237
K
Sbjct: 220 GVK 222
>gi|83951569|ref|ZP_00960301.1| ExsB [Roseovarius nubinhibens ISM]
gi|83836575|gb|EAP75872.1| ExsB [Roseovarius nubinhibens ISM]
Length = 233
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + +SFDYGQR++ EL+ ++
Sbjct: 2 KTLVICSGGLDSVSLAHKVAAEQTLTRLVSFDYGQRHRKELDFAARAADRLGVPF----- 56
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ + +G ++ S+LT +V + + ++ T VP RN I L A LA
Sbjct: 57 -----HLIDMRGIGAVLTGSALTDDVPVPDGHYTEASMAATVVPNRNAIMLSVAFGLATA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
G + V D+ YPDCR ++ + N ++ +V ++TP + K
Sbjct: 112 QGDEAVATAVHGGDHFIYPDCRPGFAKSFQAMQNHALDGYANVFLYTPFIDAPKSAIVTE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ ++ +CY G C C C R++ +
Sbjct: 172 G------ARHHTPFADTWSCYKGGD-------MHCGRCGTCVERREAF 206
>gi|303229849|ref|ZP_07316626.1| protein ExsB [Veillonella atypica ACS-134-V-Col7a]
gi|302515479|gb|EFL57444.1| protein ExsB [Veillonella atypica ACS-134-V-Col7a]
Length = 229
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 101/243 (41%), Gaps = 38/243 (15%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + A++LFSGG DS+TCL+ A++RF + V LS YGQ++ ELE V
Sbjct: 1 MAQKQKAVVLFSGGVDSTTCLALAIERFGKENVVPLSIQYGQKHSKELEAAANV------ 54
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-----------NTFVPGR 111
E + + L S+SSL K + + +T+VP R
Sbjct: 55 ----LSYYGIEGKTMDVTKLFAFSNSSLLKQSTEDVPTGSYKEQQDEHGEGPVSTYVPFR 110
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVH 169
N +FL AA+LA L I G D +G YPDC ++ AI G ++
Sbjct: 111 NGLFLSAAASLALSLDCGYIYYGAHADDAAGNAYPDCTETFYTSMGNAIFEGSGKECSLE 170
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
P + K + + +G + E + +CY G + C C C RQ+
Sbjct: 171 APFINRNKADVVREGLRLG------VPYELTWSCYEGGD-------HPCGHCGTCIDRQE 217
Query: 230 GWM 232
+
Sbjct: 218 AFR 220
>gi|84489963|ref|YP_448195.1| ATPase [Methanosphaera stadtmanae DSM 3091]
gi|110816234|sp|Q2NF51|QUEC_METST RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|84373282|gb|ABC57552.1| predicted ATPase [Methanosphaera stadtmanae DSM 3091]
Length = 226
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 34/236 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P A+ + SGG DS+ S + +D + ++F+YGQ ++ L K I E +
Sbjct: 1 MKPKAITVLSGGLDSTVATSIYANDYD-ITAITFNYGQ---QSIKQELKHAKMICEKLDM 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----------LPNTFVPGRNIIF 115
+ ++ L L +IS+SSLT + ++ +N + +VP RN +F
Sbjct: 57 ------KHIVIDLPWLKEISNSSLTTDKSIPQPSDNDLDDYDKSIETAKSVWVPARNTVF 110
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
A + A + I++G + +PD + +++ I G + + PL+ +
Sbjct: 111 CSIALSYAESIQAKIIIVGWDYEEAVTFPDNSKEYLKSFNETIKYGSFDDIEIKAPLIDM 170
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + K + VN + S++CY+G C C +C R++ +
Sbjct: 171 TKEDIVKKGHE------VNAPMNISYSCYVG-------CDTHCGVCESCKRRKRAF 213
>gi|303231219|ref|ZP_07317957.1| protein ExsB [Veillonella atypica ACS-049-V-Sch6]
gi|302514126|gb|EFL56130.1| protein ExsB [Veillonella atypica ACS-049-V-Sch6]
Length = 229
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 101/243 (41%), Gaps = 38/243 (15%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + A++LFSGG DS+TCL+ A++RF + V LS YGQ++ ELE V
Sbjct: 1 MAQKQKAVVLFSGGVDSTTCLALAIERFGKENVVPLSIQYGQKHSKELEAAANV------ 54
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-----------NTFVPGR 111
E + + L S+SSL K + + +T+VP R
Sbjct: 55 ----LSYYGIEGKTMDVTKLFAFSNSSLLKQSTEDVPTGSYKEQQDEHGEGPVSTYVPFR 110
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVH 169
N +FL AA+LA L I G D +G YPDC ++ AI G ++
Sbjct: 111 NGLFLSAAASLALSLDCGYIYYGAHADDAAGNAYPDCTETFYTSMGNAIFEGSGKECSLE 170
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
P + K + + +G + E + +CY G + C C C RQ+
Sbjct: 171 APFINRNKADVVREGLRLG------VPYELTWSCYEGGD-------HPCGHCGTCIDRQE 217
Query: 230 GWM 232
+
Sbjct: 218 AFR 220
>gi|91773251|ref|YP_565943.1| ATPase ExsB [Methanococcoides burtonii DSM 6242]
gi|118574289|sp|Q12WI3|QUEC_METBU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|91712266|gb|ABE52193.1| Archaeosine biosynthesis protein [Methanococcoides burtonii DSM
6242]
Length = 233
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 38/237 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++LL S G DS L+ ALD D L+FDYGQR+ KK +E +
Sbjct: 2 RSILLLSSGLDSVAALAIALDNSDVFMALTFDYGQRSV----------KKEIEYSRMVCE 51
Query: 70 SLGEDH-ILPLAILGDISHSS--------------LTKNVAMKIQDNNLPNTFVPGRNII 114
G +H I+ L+ L I+++S + I +++ + +VP RN +
Sbjct: 52 HYGIEHRIITLSWLSSITNTSLVNKDLDVPELSINDLIDGPDNITEDSAKSVWVPNRNGV 111
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
F+ AA+ A G ++ G + +PD + + A++ + + V V PL+
Sbjct: 112 FINIAASFAESHGCEYVIAGFNGEEAKTFPDNSKEFVNAVDECFSYSTANGVKVLAPLID 171
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ K + A ++G LE S +CY G + C C +C R++ +
Sbjct: 172 MDKVSIVRKAMELGA------PLEYSWSCYHGAEEP-------CGVCESCMRRKRAF 215
>gi|15679119|ref|NP_276236.1| hypothetical protein MTH1108 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|41018374|sp|O27180|QUEC_METTH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|2622210|gb|AAB85597.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
gi|3023053|gb|AAC12720.1| ORF2R [Methanothermobacter thermautotrophicus]
Length = 222
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 42/245 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWK 68
A+ + SGG DS+ + +D + + ++FDYGQR ++ELE + + +
Sbjct: 2 RAISILSGGMDSAVATALMMDEY-EIHAITFDYGQRSARMELEYARRLSEHLG------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---------NLPNTFVPGRNIIFLVFA 119
E L L LG + S LT + N +VPGRN++F
Sbjct: 54 ---IEHTTLDLQWLGRLGGSVLTAGGDIPSPSNLDDTVECLETARKVWVPGRNLVFTSIG 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A + +++G + +PD + + A + +G V V P++ + K E
Sbjct: 111 VSFAEAMDAGAVIVGWDLEEAETFPDNSEEFLDAFNRLLEIGTLDGVRVVAPVIGMTKRE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM------- 232
+ ++G L E +++CY G R C C +C R++ +
Sbjct: 171 IVEAGHEVG------LPFELTYSCYAGDR-------VHCGVCESCMRRRRAFELAGIDDP 217
Query: 233 -EFKE 236
E++E
Sbjct: 218 TEYRE 222
>gi|153008345|ref|YP_001369560.1| exsB protein [Ochrobactrum anthropi ATCC 49188]
gi|167016440|sp|A6WXM7|QUEC_OCHA4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|151560233|gb|ABS13731.1| exsB protein [Ochrobactrum anthropi ATCC 49188]
Length = 232
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + LSFDYGQR+K EL+ +++
Sbjct: 2 KTLVVCSGGLDSVSLAYRIASEHQLTALLSFDYGQRHKKELDSAKACAERLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT ++ + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDITNIGASLTGSALTDDIDVPDGHYAEETMKITVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
I + V D+ YPDCR I A +T N ++ + + P + K +
Sbjct: 112 QKAEAIALAVHGGDHFIYPDCRPGFIDAFQTMQNHALDGYADIKLLAPYVHASKADIVID 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G + +CY G + C C C R++ +
Sbjct: 172 GAKHGA------PFAATWSCYKGGE-------HHCGRCGTCVERREAF 206
>gi|150377058|ref|YP_001313654.1| exsB protein [Sinorhizobium medicae WSM419]
gi|150031605|gb|ABR63721.1| exsB protein [Sinorhizobium medicae WSM419]
Length = 236
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 89/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + V LSFDYGQR++ EL+ +++
Sbjct: 2 KTIVICSGGLDSVSLAHKVAAEQELVCLLSFDYGQRHRKELDFAAVCARRLG-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIREIGRHLTGSALTDEVDVPDGHYAEETMKTTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR I A + N ++ V ++ P + + K E
Sbjct: 112 RKADAVATAVHGGDHFIYPDCRPGFIDAFQAMQNHALDGYADVGLYAPYVNVAKAEIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 172 GSRYG------TPFAETWSCYKGGA-------RHCGRCGTCVERREAF 206
>gi|327400840|ref|YP_004341679.1| exsB protein [Archaeoglobus veneficus SNP6]
gi|327316348|gb|AEA46964.1| exsB protein [Archaeoglobus veneficus SNP6]
Length = 211
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 33/233 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ + SGG DS ++ AL L+FDYGQ KK +E K
Sbjct: 4 VAVLSGGMDSGVAMAKALQEGSIELALTFDYGQ----------MAAKKEIEYAGKLCKYY 53
Query: 72 G-EDHILPLAILGDISHS-------SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
G ++ L L ++S +++ + + + +VP RN++F+ AA A
Sbjct: 54 GVAHKVIELPWLANLSSGLTEGRIPEVSEEILEAVAEETAKAVWVPNRNMVFISIAAAFA 113
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+G +V+G + +PD + ++A+ A+ + + V+V+ PL+ L K E KL
Sbjct: 114 ESMGCNAVVVGFNGEEAQTFPDNSEEFVKAMNDALRI--VNGVSVYAPLIKLDKTEIVKL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ N E + +CY Y + C C +C RQ+ + ++
Sbjct: 172 GMSM------NFPFELTWSCY-------YSYDEPCGKCESCVRRQRAFRALQK 211
>gi|288559694|ref|YP_003423180.1| queuosine biosynthesis protein QueC [Methanobrevibacter ruminantium
M1]
gi|288542404|gb|ADC46288.1| queuosine biosynthesis protein QueC [Methanobrevibacter ruminantium
M1]
Length = 211
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ +L+ SGG DS+T L L+ + V LSF+YGQ+ +E+E + K
Sbjct: 1 MSKDVVLILSGGLDSTTLLYKLLNEGNNVTALSFNYGQKAAIEIERASEICK-------- 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + D+ SSLT +Q+ +T VP RN I L A A
Sbjct: 53 --MNDVNHFVFDIRNIVDLLSSSLTDKDNDNVQE--PKSTVVPSRNTILLELATAFAISN 108
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ + G + D YPD + ++ I + ++ V P + K + KLA +
Sbjct: 109 NLEEVYYGAIKADTGDYPDTTPEFLKQINELNKVNNYEYIPVCAPFIDTDKKDVVKLALE 168
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + +E++ +CY G C C +C R + E KE+
Sbjct: 169 LG------VPIEKTWSCY------VNNDGTPCGECFSCKSRIEAIKEAKEE 207
>gi|269964053|ref|ZP_06178358.1| ExsB protein [Vibrio harveyi 1DA3]
gi|269831194|gb|EEZ85348.1| ExsB protein [Vibrio harveyi 1DA3]
Length = 159
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 66/147 (44%), Positives = 99/147 (67%), Gaps = 12/147 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL FD V ++FDYGQR+K+E+E V K +
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAEKVAKDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
S+ ++ + +L +++ SSLT++ V+ ++Q+N LPN+FVPGRNI+FL A AY+
Sbjct: 54 -SVAAHKVMDVGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR 152
+G ++ GVCETD+SGYPDCR D ++
Sbjct: 113 IGAETVITGVCETDFSGYPDCRDDFVK 139
>gi|124027914|ref|YP_001013234.1| PP-loop superfamily ATPase [Hyperthermus butylicus DSM 5456]
gi|123978608|gb|ABM80889.1| predicted PP-loop superfamily ATPase [Hyperthermus butylicus DSM
5456]
Length = 287
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 32/255 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +++K + + SGG DS+ + L R V LSF+YGQ+ ELE + +I
Sbjct: 6 VEPVVRKPCRVVAVVSGGPDSTGYMVQWLARGCMVHALSFNYGQKGSKELEVAEKLLARI 65
Query: 61 VELM--PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
E+ + E ++ ++ + ++ + + +K+++ P VP RN++ L
Sbjct: 66 NEMASSRPGWGRILEHRVVDMSFMRELWRGTQLTDETVKVEEEYQPTVVVPIRNVVMLSI 125
Query: 119 AATLAYRLGIT------NIVIGVCETDYSG--------YPDCRHDTIRAIETAINLGMES 164
A AY L + G D + YPDC + I A++TA L
Sbjct: 126 ATAYAYSLAERYSGENIYVAYGAHYNDIAPRSDTWEPLYPDCSPECIEALQTAFRLCHFR 185
Query: 165 H---VTVHTPLMW-LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
+ V +P L K E K + + ++ E+ +CY R + C
Sbjct: 186 GSRRIEVWSPSREGLTKAENLKRTYQL-----IGNLIYETWSCYESGR-------FHCGR 233
Query: 221 CPACYLRQKGWMEFK 235
C +C R + + E
Sbjct: 234 CKSCRNRHRAFKEAG 248
>gi|303257911|ref|ZP_07343920.1| ExsB protein [Burkholderiales bacterium 1_1_47]
gi|302859254|gb|EFL82336.1| ExsB protein [Burkholderiales bacterium 1_1_47]
Length = 231
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 95/235 (40%), Gaps = 29/235 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+TCL+ A+ + V TLSF+YGQR+ ELE +K+ +
Sbjct: 2 KAIVLSSGGVDSTTCLAMAVHELGKENVVTLSFEYGQRHSKELEGA----QKVADFYGVK 57
Query: 68 KDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
I + +S+S+ + + +T+VP RN + L A L
Sbjct: 58 HVVFNLTQIFSFSNCSLLSNSTEKPVHESYADQIAKNGEGKVSTYVPFRNGLMLSAGAAL 117
Query: 123 AYRL---GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A L I IG D +G Y DC A+ AIN+G V++ PL K
Sbjct: 118 AQSLFPEEKCEIWIGAHADDAAGNAYADCSVGFNNAMNEAINIGTYGLVSLRAPLNRWNK 177
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ ++ + E + +CY G C C C R+ +
Sbjct: 178 AQVVAKGLEL------KVPYELTWSCYDGGEK-------ACGECGTCIDRKAAFE 219
>gi|312898409|ref|ZP_07757799.1| ExsB protein [Megasphaera micronuciformis F0359]
gi|310620328|gb|EFQ03898.1| ExsB protein [Megasphaera micronuciformis F0359]
Length = 229
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 39/235 (16%)
Query: 13 LLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L SGG DS+T L+ A+D + + V LS YGQ++K EL C + +
Sbjct: 5 VLLSGGIDSTTALAQAVDTYGAENVIALSVLYGQKHKKELNCAEKIANYYGVRRISF--- 61
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------------NTFVPGRNIIFLVF 118
++ L SH+SL +N + + +T+VP RN IFL
Sbjct: 62 -------DVSPLFSYSHNSLMENSDKAVPQTSYAEQIEETKGQSPVSTYVPFRNGIFLSA 114
Query: 119 AATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
AA +A L +V G D +G YPDC A++TA+ G +T+ P + +
Sbjct: 115 AAGVALSLDCERVVYGAHADDAAGAAYPDCSPAFFDAMKTAVYEGTGGGITLEAPFIHMN 174
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K + + ++ E + +CY G C C C R+ +
Sbjct: 175 KADIVAEGLRL------HVPYELTWSCYEGGDKP-------CGLCGTCRDREAAF 216
>gi|254501553|ref|ZP_05113704.1| exsB protein [Labrenzia alexandrii DFL-11]
gi|222437624|gb|EEE44303.1| exsB protein [Labrenzia alexandrii DFL-11]
Length = 219
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 29/219 (13%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
DS T + + +SFDYGQR+K EL+ + E ++
Sbjct: 1 MDSVTLAHKIAQENELIGLISFDYGQRHKKELDYAKACADALN----------TEHILID 50
Query: 79 LAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ +G ++ S+LT N+ + ++ + T VP RN I L A +A G +
Sbjct: 51 ITNIGRQLTGSALTDNIDVPDGHYAEDTMKITVVPNRNAIMLTIAYGIASARGAEAVATA 110
Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
V D+ YPDCR + E +E + ++TP + + K + +G
Sbjct: 111 VHGGDHFIYPDCRPAFTESFEEMQRNALEGMGEIKLYTPYVRVSKADIAAEGAKLG---- 166
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +S +CY G C C C R++ +
Sbjct: 167 --VDHTKSWSCYKGGD-------IHCGRCGTCVERREAF 196
>gi|182412683|ref|YP_001817749.1| exsB protein [Opitutus terrae PB90-1]
gi|177839897|gb|ACB74149.1| exsB protein [Opitutus terrae PB90-1]
Length = 220
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 28/222 (12%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKDSLGEDHIL 77
DS T L WA +SFDYG ++ EL ++ ++
Sbjct: 1 MDSVTALYWAAREHHVSAVVSFDYGSKHNPKELPFAAEHAARLGA----------RHEVI 50
Query: 78 PLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
L + + S+L + + N+ T VP RN I L A LA +G +VI
Sbjct: 51 HLDFVNRLFASALLQRGGAIPDGHYEAENMKQTVVPFRNAILLSIACGLAESVGAEGLVI 110
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
D++ YPDCR + +RA+ A+ LG + + + P + K + +G
Sbjct: 111 AAHGGDHAIYPDCREEFMRAMGEAMALGTYAGIRLLRPFIAKNKAQIAAEGARLG----- 165
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +CY G C +C C R++ + E
Sbjct: 166 -VDFARTWSCYKGG-------PVHCGTCGTCVERREAFAEAG 199
>gi|260585060|ref|ZP_05852802.1| ExsB protein [Granulicatella elegans ATCC 700633]
gi|260157256|gb|EEW92330.1| ExsB protein [Granulicatella elegans ATCC 700633]
Length = 214
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 91/221 (41%), Gaps = 18/221 (8%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DSST LS AL + +VE +SF Y Q++K E L +KI L
Sbjct: 3 LVLLSGGVDSSTALSLALSQDPQVEAISFSYNQKHK---ELELEAARKIAAYYKVPHQIL 59
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
I + + + + + NT V RN IF+ A +A + G + I
Sbjct: 60 EVSSIFSGSKSSLNAGNDI-EVSTGDYATQTEANTEVEFRNGIFISILAGIAMQKGASEI 118
Query: 132 VIGVCETDYS-GYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
G D YPDC + I A+ A+ LG V + P +KK + ++G
Sbjct: 119 YFGAHLDDSGVIYPDCSPEFIEAMNQAVQLGSGGKVRLTAPFGQVKKKDIVAKGVELG-- 176
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E +++CY G C C C R K +
Sbjct: 177 ----VPYELTYSCYNGVYPP-------CGKCGTCIDRNKAF 206
>gi|167950640|ref|ZP_02537714.1| exsB protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 213
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ A A++L SGG DS+T L+ A + LS YGQR+ EL+ V + + +
Sbjct: 1 MSLAKRAVVLLSGGLDSATVLAMARQQGFECHALSMLYGQRHAAELDAARQVAQALGAV- 59
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
DH L L DI S+LT K +P T+VP RN +FL A
Sbjct: 60 ---------DHKLINIGLDDIGGSALTDEQIAVPKTPSEGIPPTYVPARNTVFLSLALGW 110
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTP 171
A L +I IGV DYSGYPDCR + I A E NL + + +HTP
Sbjct: 111 AEVLEAQDIFIGVNAVDYSGYPDCRPEFIVAFEQLANLATKAGVEGRRIHIHTP 164
>gi|327198316|ref|YP_004306890.1| QueC [Streptococcus phage Dp-1]
gi|314912618|gb|ADT64009.1| QueC [Streptococcus phage Dp-1]
Length = 228
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 17/228 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+++L SGG DS+TCL+ +D++ V ++F+YGQ+++ ELE V
Sbjct: 2 KSVVLLSGGVDSATCLAIEVDKWGSKNVHAIAFNYGQKHEAELENAANVAMFYGVKFTIL 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++L S K+ A + + + +T+VP RN + L AA AY +G
Sbjct: 62 EIDSKIYSSSSSSLLQGKGEISHGKSYAEILAEKEVVDTYVPFRNGLMLSQAAAYAYSVG 121
Query: 128 ITNIVI--GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ +V + YPDC + ++ A+ G VT+ PL+ L K + K
Sbjct: 122 ASYVVYGAHADDAAGGAYPDCTPEFYNSMSNAMEYGTGGKVTLVAPLLTLTKAQVVKWGI 181
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
D+ ++ + +CY + C +C C R+K + E
Sbjct: 182 DL------DVPYFLTRSCYESDAES-------CGTCATCIDRKKAFEE 216
>gi|116253991|ref|YP_769829.1| transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841]
gi|110816252|sp|Q1MBE0|QUEC_RHIL3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|115258639|emb|CAK09743.1| putative transcriptional regulator [Rhizobium leguminosarum bv.
viciae 3841]
Length = 236
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS T + +SFDYGQR++ EL+ ++
Sbjct: 2 KTIVVCSGGLDSVTLAHKVAAEQQLIGLVSFDYGQRHRKELDFAARCASRLS-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
HI+ +A +G +S S+LT NV + + + T VP RN I L A LA
Sbjct: 54 --VPHHIIDIAGIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A + N +E + V + P + + K
Sbjct: 112 QKADAVAVAVHGGDHFIYPDCRPGFIEAFQRMQNEALEGYASVKLLAPYVDVSKAAIVVD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ G E+ +CY G C C C R++ +
Sbjct: 172 GEKHG------TPFSETWSCYKGGEP-------HCGRCGTCVERREAF 206
>gi|222082947|ref|YP_002542312.1| succinoglycan biosynthesis transcriptional regulator protein
[Agrobacterium radiobacter K84]
gi|254764294|sp|B9JLH9|QUEC_AGRRK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|221727626|gb|ACM30715.1| succinoglycan biosynthesis transcriptional regulator protein
[Agrobacterium radiobacter K84]
Length = 236
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 33/241 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + +SFDYGQR++ EL+ K++
Sbjct: 2 KTIVVCSGGLDSVSLAHKVAAEQQLIGLVSFDYGQRHRKELDFAAACAKRLG-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A LA
Sbjct: 54 --VPHEIIDITTIGKHLTGSALTDDVDVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A + N ++ + V+++ P + K +
Sbjct: 112 QKADAVAVAVHGGDHFIYPDCRPGFIDAFQQMQNQALDGYASVSLYAPFVMTSKADIVTD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
E+ +CY G C C C R++ + E Y+
Sbjct: 172 G------ARHKTPFAETWSCYKGGE-------RHCGRCGTCVERREAFHLAGVEDPTDYE 218
Query: 240 D 240
D
Sbjct: 219 D 219
>gi|17986379|ref|NP_539013.1| succinoglycan biosynthesis regulator [Brucella melitensis bv. 1
str. 16M]
gi|62290820|ref|YP_222613.1| exsB protein [Brucella abortus bv. 1 str. 9-941]
gi|82700732|ref|YP_415306.1| ExsB protein [Brucella melitensis biovar Abortus 2308]
gi|148559755|ref|YP_001259789.1| exsB protein [Brucella ovis ATCC 25840]
gi|163843994|ref|YP_001628398.1| exsB protein [Brucella suis ATCC 23445]
gi|189025039|ref|YP_001935807.1| ExsB protein [Brucella abortus S19]
gi|225628171|ref|ZP_03786206.1| exsB protein [Brucella ceti str. Cudo]
gi|225853408|ref|YP_002733641.1| ExsB protein [Brucella melitensis ATCC 23457]
gi|237816334|ref|ZP_04595327.1| exsB protein [Brucella abortus str. 2308 A]
gi|254690110|ref|ZP_05153364.1| exsB protein [Brucella abortus bv. 6 str. 870]
gi|254694600|ref|ZP_05156428.1| exsB protein [Brucella abortus bv. 3 str. Tulya]
gi|254696225|ref|ZP_05158053.1| exsB protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254700610|ref|ZP_05162438.1| exsB protein [Brucella suis bv. 5 str. 513]
gi|254707505|ref|ZP_05169333.1| exsB protein [Brucella pinnipedialis M163/99/10]
gi|254708955|ref|ZP_05170766.1| exsB protein [Brucella pinnipedialis B2/94]
gi|254731143|ref|ZP_05189721.1| exsB protein [Brucella abortus bv. 4 str. 292]
gi|256030482|ref|ZP_05444096.1| exsB protein [Brucella pinnipedialis M292/94/1]
gi|256112300|ref|ZP_05453221.1| exsB protein [Brucella melitensis bv. 3 str. Ether]
gi|256158468|ref|ZP_05456366.1| exsB protein [Brucella ceti M490/95/1]
gi|256253887|ref|ZP_05459423.1| exsB protein [Brucella ceti B1/94]
gi|256258364|ref|ZP_05463900.1| exsB protein [Brucella abortus bv. 9 str. C68]
gi|256263112|ref|ZP_05465644.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 2 str.
63/9]
gi|256370374|ref|YP_003107885.1| queuosine biosynthesis protein QueC [Brucella microti CCM 4915]
gi|260169389|ref|ZP_05756200.1| queuosine biosynthesis protein QueC [Brucella sp. F5/99]
gi|260546087|ref|ZP_05821827.1| queuosine biosynthesis protein queC [Brucella abortus NCTC 8038]
gi|260562884|ref|ZP_05833370.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
16M]
gi|260755649|ref|ZP_05867997.1| queuosine biosynthesis protein queC [Brucella abortus bv. 6 str.
870]
gi|260758874|ref|ZP_05871222.1| queuosine biosynthesis protein queC [Brucella abortus bv. 4 str.
292]
gi|260760598|ref|ZP_05872941.1| queuosine biosynthesis protein queC [Brucella abortus bv. 2 str.
86/8/59]
gi|260884674|ref|ZP_05896288.1| queuosine biosynthesis protein queC [Brucella abortus bv. 9 str.
C68]
gi|261214924|ref|ZP_05929205.1| queuosine biosynthesis protein queC [Brucella abortus bv. 3 str.
Tulya]
gi|261221024|ref|ZP_05935305.1| queuosine biosynthesis protein queC [Brucella ceti B1/94]
gi|261314988|ref|ZP_05954185.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
M163/99/10]
gi|261316454|ref|ZP_05955651.1| queuosine biosynthesis protein queC [Brucella pinnipedialis B2/94]
gi|261751119|ref|ZP_05994828.1| queuosine biosynthesis protein queC [Brucella suis bv. 5 str. 513]
gi|261758911|ref|ZP_06002620.1| queuosine biosynthesis protein queC [Brucella sp. F5/99]
gi|265987524|ref|ZP_06100081.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
M292/94/1]
gi|265993733|ref|ZP_06106290.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 3 str.
Ether]
gi|265996984|ref|ZP_06109541.1| queuosine biosynthesis protein queC [Brucella ceti M490/95/1]
gi|297247206|ref|ZP_06930924.1| exsB protein [Brucella abortus bv. 5 str. B3196]
gi|75496157|sp|Q57AT2|QUEC_BRUAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|81852586|sp|Q8YJI8|QUEC_BRUME RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110816216|sp|Q2YR96|QUEC_BRUA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|167016411|sp|A5VSU2|QUEC_BRUO2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189038899|sp|B0CIX5|QUEC_BRUSI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764309|sp|B2S8M9|QUEC_BRUA1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|254764310|sp|C0RFL5|QUEC_BRUMB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|17981969|gb|AAL51277.1| succinoglycan biosynthesis regulator [Brucella melitensis bv. 1
str. 16M]
gi|62196952|gb|AAX75252.1| exsB protein [Brucella abortus bv. 1 str. 9-941]
gi|82616833|emb|CAJ11929.1| ExsB protein [Brucella melitensis biovar Abortus 2308]
gi|148371012|gb|ABQ60991.1| exsB protein [Brucella ovis ATCC 25840]
gi|163674717|gb|ABY38828.1| exsB protein [Brucella suis ATCC 23445]
gi|189020611|gb|ACD73333.1| ExsB protein [Brucella abortus S19]
gi|225616996|gb|EEH14043.1| exsB protein [Brucella ceti str. Cudo]
gi|225641773|gb|ACO01687.1| exsB protein [Brucella melitensis ATCC 23457]
gi|237788401|gb|EEP62616.1| exsB protein [Brucella abortus str. 2308 A]
gi|256000537|gb|ACU48936.1| queuosine biosynthesis protein QueC [Brucella microti CCM 4915]
gi|260096194|gb|EEW80070.1| queuosine biosynthesis protein queC [Brucella abortus NCTC 8038]
gi|260152900|gb|EEW87992.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
16M]
gi|260669192|gb|EEX56132.1| queuosine biosynthesis protein queC [Brucella abortus bv. 4 str.
292]
gi|260671030|gb|EEX57851.1| queuosine biosynthesis protein queC [Brucella abortus bv. 2 str.
86/8/59]
gi|260675757|gb|EEX62578.1| queuosine biosynthesis protein queC [Brucella abortus bv. 6 str.
870]
gi|260874202|gb|EEX81271.1| queuosine biosynthesis protein queC [Brucella abortus bv. 9 str.
C68]
gi|260916531|gb|EEX83392.1| queuosine biosynthesis protein queC [Brucella abortus bv. 3 str.
Tulya]
gi|260919608|gb|EEX86261.1| queuosine biosynthesis protein queC [Brucella ceti B1/94]
gi|261295677|gb|EEX99173.1| queuosine biosynthesis protein queC [Brucella pinnipedialis B2/94]
gi|261304014|gb|EEY07511.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
M163/99/10]
gi|261738895|gb|EEY26891.1| queuosine biosynthesis protein queC [Brucella sp. F5/99]
gi|261740872|gb|EEY28798.1| queuosine biosynthesis protein queC [Brucella suis bv. 5 str. 513]
gi|262551452|gb|EEZ07442.1| queuosine biosynthesis protein queC [Brucella ceti M490/95/1]
gi|262764714|gb|EEZ10635.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 3 str.
Ether]
gi|263093013|gb|EEZ17163.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 2 str.
63/9]
gi|264659721|gb|EEZ29982.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
M292/94/1]
gi|297174375|gb|EFH33722.1| exsB protein [Brucella abortus bv. 5 str. B3196]
gi|326409971|gb|ADZ67036.1| ExsB protein [Brucella melitensis M28]
gi|326539688|gb|ADZ87903.1| exsB protein [Brucella melitensis M5-90]
Length = 232
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 87/228 (38%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + LSFDYGQR+K EL+ K++
Sbjct: 2 KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A +T ++ V + P + K +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G C C C R++ +
Sbjct: 172 G------AKYRTPFEATWSCYKGAD-------RHCGRCGTCVERREAF 206
>gi|227498705|ref|ZP_03928849.1| archaeosine biosynthesis protein queC [Acidaminococcus sp. D21]
gi|226904161|gb|EEH90079.1| archaeosine biosynthesis protein queC [Acidaminococcus sp. D21]
Length = 233
Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 29/238 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL+L SGG DS+TC+S A+ + V T+S YGQ+++ EL+ +K+ +
Sbjct: 1 MSKKALVLSSGGVDSTTCVSVAVHELGRENVATVSIFYGQKHRKELDAA----QKVADFY 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
L I + +SHS+ + + +T+VP RN + L
Sbjct: 57 HVPHYELDLSKIFQYSNCSLLSHSTEEIIHESYEDQIAQNGEGKVSTYVPFRNGLMLSAV 116
Query: 120 ATLAYRL---GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A+LA L +I +G D +G Y DC A+ AI++G + P +
Sbjct: 117 ASLAMSLFEKDDVDIYLGAHADDAAGNAYADCSEAFTDAMGKAISIGTYEQCHLVAPFVE 176
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ K K ++G E + +CY G C +C C R + +
Sbjct: 177 VNKAGIVKKGLELG------TPYELTWSCYEGGDRP-------CGTCGTCIDRARAFA 221
>gi|56698569|ref|YP_168945.1| ExsB [Ruegeria pomeroyi DSS-3]
gi|81348746|sp|Q5LM13|QUEC_SILPO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|56680306|gb|AAV96972.1| ExsB [Ruegeria pomeroyi DSS-3]
Length = 230
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + D + +SFDYGQR++ EL+ ++
Sbjct: 2 KTLVICSGGLDSVSLAHKVAAEHDLIGLISFDYGQRHRKELDFAARAATRLG-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ + +G +S S+LT +V + ++ + T VP RN I L A +A
Sbjct: 54 --VPHDLIDMRQIGAHLSGSALTDDVDVPDGHYAEDTMKITVVPNRNAIMLAIAFGIAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR +A E ++ + V ++TP + K
Sbjct: 112 KQADAVATAVHGGDHFIYPDCRPGFTQAFEAMQAQALDGYASVRLYTPFVHEPKSAIVTE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ N ++ +CY G C C C R++ +
Sbjct: 172 G------ERHNTPFADTWSCYKGGE-------VHCGRCGTCVERREAF 206
>gi|13474826|ref|NP_106396.1| succinoglycan biosynthesis regulator (exsB) [Mesorhizobium loti
MAFF303099]
gi|81777975|sp|Q98AZ0|QUEC1_RHILO RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|14025582|dbj|BAB52182.1| succinoglycan biosynthesis regulator; ExsB [Mesorhizobium loti
MAFF303099]
Length = 232
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+AL++ SGG DS + + LSFDYGQR+K EL K++
Sbjct: 2 NALVICSGGLDSVSLAHKVATEQKLIGLLSFDYGQRHKKELGFAAICAKRLA-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G +S S+LT NV + ++++ T VP RN I L A +A
Sbjct: 54 --VPHQIVDIRDVGRNLSGSALTDNVDVPDGHYAEDSMRITVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR I A +T N + + + ++ P + + K +
Sbjct: 112 KKADAVATAVHGGDHFIYPDCRPAFIDAFQTMQNHALAGYADIRLYAPYVNMSKADIVSE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G C C C R++ +
Sbjct: 172 GAKYA------TPFEATWSCYKGGA-------RHCGRCGTCVERREAF 206
>gi|16264811|ref|NP_437603.1| hypothetical protein SM_b20940 [Sinorhizobium meliloti 1021]
gi|307308043|ref|ZP_07587761.1| exsB protein [Sinorhizobium meliloti BL225C]
gi|307319888|ref|ZP_07599311.1| exsB protein [Sinorhizobium meliloti AK83]
gi|81811844|sp|Q92UN9|QUEC_RHIME RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|15140949|emb|CAC49463.1| probable succinoglycan biosynthesis regulator [Sinorhizobium
meliloti 1021]
gi|306894428|gb|EFN25191.1| exsB protein [Sinorhizobium meliloti AK83]
gi|306901447|gb|EFN32051.1| exsB protein [Sinorhizobium meliloti BL225C]
Length = 236
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + LSFDYGQR++ EL+ +++
Sbjct: 2 KTIVICSGGLDSVSLAHKVAAEQELSGLLSFDYGQRHRKELDFAAACARRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIREIGRRLTGSALTDEVDVPDGHYAEETMKATVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR I A + + ++ V ++ P + + K +
Sbjct: 112 RKADAVATAVHGGDHFIYPDCRPGFIDAFQAMQDHALDGYADVALYAPFVNVSKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E+ +CY G C C C R++ +
Sbjct: 172 G------ARHDTPFAETWSCYKGGA-------RHCGRCGTCVERREAF 206
>gi|150399982|ref|YP_001323749.1| exsB protein [Methanococcus vannielii SB]
gi|167016438|sp|A6URL5|QUEC_METVS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|150012685|gb|ABR55137.1| exsB protein [Methanococcus vannielii SB]
Length = 233
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ + SGG DS A + T++F+YGQ + L+ L KKI +++
Sbjct: 2 KAISVLSGGLDSLVTSMVAKKENSEIATVTFNYGQ---MALDKELKSAKKISKVLG---- 54
Query: 70 SLGEDHILPLAILGDISHSS-LTKNVAMKIQDN---------NLPNTFVPGRNIIFLVFA 119
E+ + ++ + + S S T N+ +D+ + + +VP RN+I A
Sbjct: 55 --AENQVFDISFVKEFSKSGLNTGNIPNPKKDDLDDFKESEKTMKSVWVPARNMIMFSIA 112
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A + I G+ + + +PD + I + ++ G + V ++ PL L K E
Sbjct: 113 SGFAEGINAEKIYSGLNKEEGVTFPDNSTEFINSFNKSLEYGTLNKVKMYAPLYNLDKVE 172
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + + ++ IL+ S++CY RD ++ C +C +C R++ +
Sbjct: 173 IATFGKRLEDELGLD-ILKYSYSCY---RDNLKDY-LHCGTCESCMRRKRAFESAG 223
>gi|323143038|ref|ZP_08077744.1| protein ExsB [Succinatimonas hippei YIT 12066]
gi|322417232|gb|EFY07860.1| protein ExsB [Succinatimonas hippei YIT 12066]
Length = 230
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 47/251 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL+L SGG DS+TCL++A+D+ + V ++S YGQ++K EL+C +
Sbjct: 3 KALVLSSGGVDSTTCLAFAVDKLGAENVSSVSIFYGQKHKKELQCAAQLADYYK------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---------NTFVPGRNIIFLVF 118
+ + L L+++ S+ +L +N + I++ + NT+VP RN +FL
Sbjct: 57 ----VKHYELDLSMMFKNSNCALLENSSQDIEEGSYSTQIAVHGKVNTYVPFRNGLFLAS 112
Query: 119 AATLAYRLGITN---IVIGVCETDYS--GYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
A+LA + + I +G D + Y DC + I A+ AI+LG S + P
Sbjct: 113 VASLAGSIYPDDEVEIYLGAHADDAALNAYADCSMEFIEAMNKAISLGTYSKERIVAPFA 172
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM- 232
K E K + + E + +CY GK C C C R+K +
Sbjct: 173 GQNKAEVVKTGLKL------KVPYEMTWSCYEGKDKP-------CGKCATCIDRRKAFEA 219
Query: 233 -------EFKE 236
E+KE
Sbjct: 220 NGAVDPVEYKE 230
>gi|254718022|ref|ZP_05179833.1| exsB protein [Brucella sp. 83/13]
gi|265982970|ref|ZP_06095705.1| queuosine biosynthesis protein queC [Brucella sp. 83/13]
gi|306839803|ref|ZP_07472604.1| exsB protein [Brucella sp. NF 2653]
gi|264661562|gb|EEZ31823.1| queuosine biosynthesis protein queC [Brucella sp. 83/13]
gi|306405158|gb|EFM61436.1| exsB protein [Brucella sp. NF 2653]
Length = 232
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + LSFDYGQR++ EL+ K++
Sbjct: 2 KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHRKELDFAQACAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A +T ++ V + P + K +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIDAFQTMQKHALDGYADVKLLAPYVHATKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G C C C R++ +
Sbjct: 172 G------AKYHTPFEATWSCYKGAE-------RHCGRCGTCVERREAF 206
>gi|239832974|ref|ZP_04681303.1| exsB protein [Ochrobactrum intermedium LMG 3301]
gi|239825241|gb|EEQ96809.1| exsB protein [Ochrobactrum intermedium LMG 3301]
Length = 232
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + LSFDYGQR++ EL+ +++
Sbjct: 2 KTLVVCSGGLDSVSLAYRIAGEHQLTALLSFDYGQRHRKELDSAKACAERLGA------- 54
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 55 ---PHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKITVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A +T N ++ + + P + + K +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIDAFQTMQNHALDGYADIKLLAPYVHVSKADIVID 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G + +CY G + C C C R++ +
Sbjct: 172 GAKYG------TPFAATWSCYKGGE-------HHCGRCGTCVERREAF 206
>gi|284048976|ref|YP_003399315.1| exsB protein [Acidaminococcus fermentans DSM 20731]
gi|283953197|gb|ADB48000.1| exsB protein [Acidaminococcus fermentans DSM 20731]
Length = 232
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
AL+L SGG DS+TC+S A++ F + V T+S YGQ+++ ELEC +K+ E
Sbjct: 1 MNKKALVLSSGGVDSTTCVSVAVEEFGKENVSTVSIFYGQKHRKELECA----RKVAEYY 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
L I + + HS+ + + +T+VP RN + L
Sbjct: 57 GLPHYELDLSKIFQYSNCSLLDHSTEEIVHESYEQQIAENGEGKVSTYVPFRNGLMLSAV 116
Query: 120 ATLA---YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A+LA Y +I IG D +G Y DC I A+ AI+LG + + P
Sbjct: 117 ASLAMSIYEKDDVSIFIGAHADDAAGNAYADCSEAFIGAMGKAISLGTYNQCHIVAPFAS 176
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K K ++ + + + +CY G C +C C R + +
Sbjct: 177 CSKAGVVKRGLEL------HTPYDLTWSCYEGGDKP-------CGTCGTCIDRARAFA 221
>gi|282881611|ref|ZP_06290280.1| protein ExsB [Prevotella timonensis CRIS 5C-B1]
gi|281304597|gb|EFA96688.1| protein ExsB [Prevotella timonensis CRIS 5C-B1]
Length = 218
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 30/231 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+L++ SGG DS T L R +SFDYG + +K + L
Sbjct: 1 MEKDSLIIVSGGMDSITMLYEYQQR--IAIGVSFDYGSNHN----------QKEIPLAKM 48
Query: 67 WKDSLGEDHI-LPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
+ LG HI +PL+ + D SSL + ++ N+ +T VP RN I L
Sbjct: 49 HCERLGIRHIVIPLSFIHDYFKSSLLEGDDAIPEGHYEEENMKSTVVPFRNGIMLAVGCG 108
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA + ++I D++ YPDCR I + A+ G +T+ P + K E
Sbjct: 109 LAVSNHLKYVMIANHGGDHTIYPDCRPAFIDSFSQAMTAGTFEGITILAPYTRISKGEIA 168
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ +G + E+ +CY G + C C C R++
Sbjct: 169 LRGKKLG------INYAETWSCYKGGDKQ-------CGKCGTCVERKEALA 206
>gi|256059943|ref|ZP_05450128.1| exsB protein [Brucella neotomae 5K33]
gi|261323915|ref|ZP_05963112.1| queuosine biosynthesis protein queC [Brucella neotomae 5K33]
gi|261299895|gb|EEY03392.1| queuosine biosynthesis protein queC [Brucella neotomae 5K33]
Length = 232
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 87/228 (38%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + LSFDYGQR+K EL+ K++
Sbjct: 2 KTLVICSGGLDSVSLTHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A +T ++ V + P + K +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G C C C R++ +
Sbjct: 172 G------AKYRTPFEATWSCYKGAD-------RHCGRCGTCVERREAF 206
>gi|306842892|ref|ZP_07475528.1| exsB protein [Brucella sp. BO2]
gi|306286915|gb|EFM58435.1| exsB protein [Brucella sp. BO2]
Length = 232
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + LSFDYGQR++ EL+ K++
Sbjct: 2 KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHRKELDFAQACAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A +T ++ V + P + K +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADI--- 168
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + E + +CY G C C C R++ +
Sbjct: 169 ---LADGAKYHTPFEATWSCYKGAE-------RHCGRCGTCVERREAF 206
>gi|126642577|ref|YP_001085561.1| hypothetical protein A1S_2542 [Acinetobacter baumannii ATCC 17978]
Length = 190
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 42 YGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQ- 99
YGQR+ EL+ + ++ G +H + L ++ S+LT N+A+ Q
Sbjct: 2 YGQRSTTELDAAKALAQR-----------AGVEHRVINIDLANLGGSALTDHNIAVPEQL 50
Query: 100 DNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN 159
+P T+VP RN IFL +A A IVIG+ DYSGYPDCR + I A
Sbjct: 51 QEGIPVTYVPARNTIFLSYALAAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMAR 110
Query: 160 LGMESHV-----TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEW 214
L ++ V TPL+ L K +L + G + ++ +CY
Sbjct: 111 LATKAGVEGKPLKFETPLLHLSKANIIRLGIEHG------VDYSQTVSCYQAD-----AQ 159
Query: 215 GYGCNSCPACYLRQKGWMEFK 235
G C C +C LR++G+++
Sbjct: 160 GRACGKCDSCRLRKEGFIDAG 180
>gi|222149729|ref|YP_002550686.1| succinoglycan biosynthesis regulator [Agrobacterium vitis S4]
gi|254764295|sp|B9JS46|QUEC_AGRVS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|221736711|gb|ACM37674.1| succinoglycan biosynthesis regulator [Agrobacterium vitis S4]
Length = 235
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + + +SFDYGQR+K EL+ K++
Sbjct: 2 KILVVCSGGLDSVSLADKMAAEHELIGLISFDYGQRHKKELDFAALAAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT ++ + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDMTNIGASLTGSALTDDLDVPDGHYAEETMKITVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A + +E V + P + + K +
Sbjct: 112 KKADAVALAVHGGDHFIYPDCRPGFIDAFQIMQAHALEGYADVKLLAPFVTVSKADIVTE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G +++ +CY G C C C R++ +
Sbjct: 172 GAKYG------TPFDQTWSCYKGGA-------RHCGRCGTCVERREAF 206
>gi|306843409|ref|ZP_07476010.1| exsB protein [Brucella sp. BO1]
gi|306276100|gb|EFM57800.1| exsB protein [Brucella sp. BO1]
Length = 232
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + LSFDYGQR++ EL+ K++
Sbjct: 2 KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHRKELDFAQACAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A +T ++ V + P + K +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E + +CY G C C C R++ +
Sbjct: 172 G------AKYHTPFEATWSCYKGAD-------RHCGRCGTCVERREAF 206
>gi|290967794|ref|ZP_06559347.1| protein ExsB [Megasphaera genomosp. type_1 str. 28L]
gi|290782153|gb|EFD94728.1| protein ExsB [Megasphaera genomosp. type_1 str. 28L]
Length = 226
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 21/230 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+L SGG DS+TCL+ + ++ + ++ YGQ++ EL+ V +
Sbjct: 2 KCLVLLSGGIDSTTCLALGVKKYGASELLAVTAYYGQKHAKELQAARNVAAYYGVAHREI 61
Query: 68 KDSLG---EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
S D L G I+H+S + +A K L +T+VP RN +FL FAA LA
Sbjct: 62 DVSQAFTLSDCPLLAGRKGAIAHTSYSDQLAAKGGAGTL-DTYVPFRNGLFLSFAAALAV 120
Query: 125 RLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+ + I G D +G YPDC + +A+ TAI G + PL+ K + +
Sbjct: 121 SVHASCIYYGAHADDAAGRAYPDCTPEFEQAMATAIYEGSGKTCRLEAPLLQWNKAQVVR 180
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ + + +CY G+ C C C R +
Sbjct: 181 QGLQL------HAPYHLTWSCYEGREKP-------CGLCGTCRDRAAAFA 217
>gi|241206474|ref|YP_002977570.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860364|gb|ACS58031.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 236
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS T + +SFDYGQR++ EL+ ++
Sbjct: 2 KTIVVCSGGLDSVTLAHKVAAEQQLIGLVSFDYGQRHRKELDFAARCASRLAVPY----- 56
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
HI+ +A +G +S S+LT NV + + + T VP RN I L A LA
Sbjct: 57 -----HIIDIASIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A + N ++ +V + P + K
Sbjct: 112 QKADAVAVAVHGGDHFIYPDCRPGFIDAFQHMQNEALDGYANVKLLAPYVDASKAAIVVD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ G E+ +CY G C C C R++ +
Sbjct: 172 GEKHG------TPFSETWSCYKGGE-------LHCGRCGTCVERREAF 206
>gi|187940192|gb|ACD39320.1| hypothetical protein PACL_0661 [Pseudomonas aeruginosa]
Length = 222
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 24/233 (10%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE--CRLCVRKK 59
+++ K+ ++L SGG DS+ CL A R V +L Y Q + VEL+ C R
Sbjct: 9 HEVEKEKRKIVVLHSGGLDSTVCLLLAHSRGHEVVSLGVSYNQHHHVELDYAAAQCARYG 68
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
I + S ++P KN +M + + F+PGRN IFL+ A
Sbjct: 69 IERKIVSVAWS-KPARVIP-------------KNRSMAEIKKGVSSAFLPGRNGIFLMLA 114
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A +G + G+ D+SGYPDCR + I + ++ + + PL K +
Sbjct: 115 SAEAAGIGADEVWTGINSVDFSGYPDCRPEFIESFRKMLSYAIPKGPKLSAPLQKKSKPQ 174
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
KLA +G Q ++ +CY C +C AC L + W
Sbjct: 175 IAKLAHRLGLQ------RHDTWSCYRP--KIAEAGFVPCGACDACKLHEFAWQ 219
>gi|23502820|ref|NP_698947.1| exsB protein [Brucella suis 1330]
gi|161619890|ref|YP_001593777.1| exsB protein [Brucella canis ATCC 23365]
gi|254704980|ref|ZP_05166808.1| exsB protein [Brucella suis bv. 3 str. 686]
gi|260567546|ref|ZP_05838016.1| queuosine biosynthesis protein queC [Brucella suis bv. 4 str. 40]
gi|261755681|ref|ZP_05999390.1| queuosine biosynthesis protein queC [Brucella suis bv. 3 str. 686]
gi|81751945|sp|Q8FYB3|QUEC_BRUSU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|189038898|sp|A9M959|QUEC_BRUC2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|23348844|gb|AAN30862.1| exsB protein [Brucella suis 1330]
gi|161336701|gb|ABX63006.1| exsB protein [Brucella canis ATCC 23365]
gi|260157064|gb|EEW92144.1| queuosine biosynthesis protein queC [Brucella suis bv. 4 str. 40]
gi|261745434|gb|EEY33360.1| queuosine biosynthesis protein queC [Brucella suis bv. 3 str. 686]
Length = 232
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + LSFDYGQR+K EL+ K++
Sbjct: 2 KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I LV A +A
Sbjct: 54 --VPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLVIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A +T ++ V + P + K +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G C C C R++ +
Sbjct: 172 G------AKYRTPFEATWSCYKGAD-------RHCGRCGTCVERREAF 206
>gi|331000424|ref|ZP_08324099.1| protein ExsB [Parasutterella excrementihominis YIT 11859]
gi|329571756|gb|EGG53436.1| protein ExsB [Parasutterella excrementihominis YIT 11859]
Length = 231
Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 95/235 (40%), Gaps = 29/235 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++L SGG DS+TCL+ A+ + V TLSF+YGQR+ ELE +K+ +
Sbjct: 2 KAIVLSSGGVDSTTCLAMAVHELGKENVVTLSFEYGQRHCKELESA----QKVADYYGVR 57
Query: 68 KDSLGEDHILPLAILGDISHSSL-----TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
I + +S S+ + + +T+VP RN + L A L
Sbjct: 58 HVVFNLTQIFSFSNCSLLSTSTEKPVHESYAEQISKNGEGKVSTYVPFRNGLMLSAGAAL 117
Query: 123 AYRL---GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A L I IG D +G Y DC A++ AIN+G V++ PL K
Sbjct: 118 AQSLFPEEKCEIWIGAHADDAAGNAYADCSVGFNNAMDQAINIGTYGLVSLRAPLNRWNK 177
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ ++ + E + +CY G C C C R+ +
Sbjct: 178 AQVVAKGLEL------KVPYELTWSCYDGGEK-------ACGECGTCIDRKAAFE 219
>gi|304315237|ref|YP_003850384.1| transcriptional regulator [Methanothermobacter marburgensis str.
Marburg]
gi|302588696|gb|ADL59071.1| predicted transcriptional regulator [Methanothermobacter
marburgensis str. Marburg]
Length = 223
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 34/233 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWK 68
SA+ + S G DS+ + + + L+FDYGQR +E+E + K +
Sbjct: 3 SAISILSAGMDSAVATALLASEY-EIHALTFDYGQRSAAMEIEHARKLAKHLG------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---------NLPNTFVPGRNIIFLVFA 119
E + L LG + S+LT + + +VPGRNI+F
Sbjct: 55 ---IEHTTIELPWLGRLGGSALTAGGEIPSPADLDDREECLETARRVWVPGRNIVFTAIG 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A L +++G + +PD + + A + +G V V PL+ + K E
Sbjct: 112 VSFAEALDADAVIVGWDLEEAETFPDNSAEFLDAFNRLLGIGTLRGVEVRAPLIGMTKRE 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++ +G L E +++CY G C C +C R++ +
Sbjct: 172 IVEVGSAVG------LPFELTYSCYSGGE-------VHCGVCESCMRRRRAFK 211
>gi|21226855|ref|NP_632777.1| hypothetical protein MM_0753 [Methanosarcina mazei Go1]
gi|74525901|sp|Q8PYU8|QUEC_METMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|20905158|gb|AAM30449.1| conserved protein [Methanosarcina mazei Go1]
Length = 231
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 63/244 (25%), Positives = 98/244 (40%), Gaps = 39/244 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
A+ L S G DS L+ A + + ++FDYGQR + E+E V +
Sbjct: 2 KAITLLSSGLDSVAALAIAAESLEIEMAITFDYGQRAGQREMEYSEKVCEHFG------- 54
Query: 69 DSLGEDHILPLAILGDISHSS---------------LTKNVAMKIQDNNLPNTFVPGRNI 113
E I+ L LG+I+H+S + +N I + + +VP RN
Sbjct: 55 ---IEQRIIKLDWLGEITHTSLVNRDEEVPSLSFEDIDENSPSMITEYSAKAVWVPNRNG 111
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
+ L A + A G IV+G + +PD D I+A++ A + ++ V V PL
Sbjct: 112 VMLNIAGSFAESRGCDYIVVGFNGEEAGTFPDNSRDYIQAVDNAFSYSTQNGVKVLAPLA 171
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ K E K A + LE S +CY G C C +C R + +
Sbjct: 172 EMGKTEIVKKALE------AEAPLEYSWSCYHGGE-------IPCGKCESCVRRARAFKN 218
Query: 234 FKEK 237
K
Sbjct: 219 IGIK 222
>gi|228471015|ref|ZP_04055859.1| ExsB protein [Porphyromonas uenonis 60-3]
gi|228307235|gb|EEK16258.1| ExsB protein [Porphyromonas uenonis 60-3]
Length = 217
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 30/228 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
++L+ SGG DS+T L + + FDYG ++ EL + +++
Sbjct: 2 RNSLIALSGGVDSTTLLYEYREE--IACAVGFDYGSKHNARELAAAKAICRELE------ 53
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
I+PLA +G+ S L + + N+ +T VP RN I L A LA
Sbjct: 54 ----IPYLIIPLAFIGEYFRSDLLLSGGEMQLGDYSEENMSSTVVPFRNGIMLSVLAGLA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ ++I D++ YPDCR ++ + AI G + V + P L K E
Sbjct: 110 ESRDLQQVLIANHFGDHAIYPDCRESFVKPMGEAITAGTSNGVKLVAPYTALTKAEIVAR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++++CY G C C C R +
Sbjct: 170 GTRLG------VPYSKTYSCYQGGE-------RHCGRCGTCRERHDAF 204
>gi|313886018|ref|ZP_07819756.1| protein ExsB [Porphyromonas asaccharolytica PR426713P-I]
gi|312924548|gb|EFR35319.1| protein ExsB [Porphyromonas asaccharolytica PR426713P-I]
Length = 217
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 30/228 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
++L+ SGG DS+T L + + FDYG ++ EL + +++
Sbjct: 2 RNSLIALSGGVDSTTLLYEYREE--VACAVGFDYGSKHNARELAAAKAICRELG------ 53
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
I+PLA +G+ S L + + N+ +T VP RN I L A LA
Sbjct: 54 ----IPYLIIPLAFIGEYFRSDLLLSGGEMQLGDYSEENMRSTVVPFRNGIMLSILAGLA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ ++I D++ YPDCR + + AI G + V + P L K E
Sbjct: 110 ESRDLQQVLIANHFGDHAIYPDCRESFVTPMGKAITAGTSNGVKLVAPYTTLTKAEIVAR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++++CY G C C C R +
Sbjct: 170 GTRLG------VPYGKTYSCYQGGE-------RHCGRCGTCRERHDAF 204
>gi|268324681|emb|CBH38269.1| conserved hypothetical protein, ExsB family [uncultured archaeon]
Length = 274
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 32/244 (13%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
K +A+ + SGG DS+ + A + + YGQR K++VE
Sbjct: 29 KPPKMTKTAVCVCSGGIDSTVTATIASEEGYELHFFHASYGQR-------AEAREKEVVE 81
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNV-AMKI-------QDNNLPNTFVPGRNII 114
+ + + E L L ++ SSLT ++ + + P+T+VP RNII
Sbjct: 82 EIASYL-NAKELKFAELPFLKELGGSSLTDKARSVPVGKEVNLDAEKETPSTWVPCRNII 140
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTP 171
L A+ A + I +G + YPD + + + + S+ V P
Sbjct: 141 LLANASAFAEVISADAIFVGFNAEEARSYPDNEKEFVDRYNAVLEKAVASYCRPPIVKAP 200
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L+ L K E K ++ L+ +++CYLG++ C C +C R++G+
Sbjct: 201 LVDLLKQEIIKKGVEVKA------PLQLTYSCYLGEKK-------HCGICESCQHRRRGF 247
Query: 232 MEFK 235
+
Sbjct: 248 KDAG 251
>gi|332797158|ref|YP_004458658.1| exsB protein [Acidianus hospitalis W1]
gi|332694893|gb|AEE94360.1| exsB protein [Acidianus hospitalis W1]
Length = 463
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 30/235 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K L++ SGG DS+ ++ L + + L F+Y R+K E + R VRK I E +
Sbjct: 239 KDKKKVLVIASGGLDSTVAATYLLRQGHEITLLHFNY--RHKAEEKEREAVRK-ISEYLQ 295
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFA 119
+ + I H++L K +++ + +VP RN+IF A
Sbjct: 296 VPYIE------IDTDLFKIIGHTTLLKGGGEIVKERQGEEGAEFAHEWVPARNLIFFSVA 349
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKK 177
+A G I G+ + YPD + +R + V P+ L K
Sbjct: 350 LAIAEAYGFDAIASGINLEEAGAYPDNEMEFVRLFSKLSPYATGPNKKIEVMMPVGNLVK 409
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+E KL +IG L + +CY G C C CY+R+ +
Sbjct: 410 HEIVKLGVEIGA------PLHLTWSCYEGGEK-------HCGKCGPCYMRKMAFK 451
>gi|313891425|ref|ZP_07825041.1| protein ExsB [Dialister microaerophilus UPII 345-E]
gi|329121409|ref|ZP_08250034.1| transcription regulator ExsB [Dialister micraerophilus DSM 19965]
gi|313120200|gb|EFR43376.1| protein ExsB [Dialister microaerophilus UPII 345-E]
gi|327469699|gb|EGF15166.1| transcription regulator ExsB [Dialister micraerophilus DSM 19965]
Length = 230
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 28/240 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+TC+S A+D+ + V T S YGQ+++ ELEC +K+ +
Sbjct: 2 KRAIILSSGGVDSTTCISVAVDKLGRENVATASIFYGQKHEKELECA----RKVAQFYNL 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPN-TFVPGRNIIFLVFAATL 122
+L + ++ S+ ++++N+ T+VP RN + L AA+L
Sbjct: 58 KHYEFNLAQVLQYSNCPLLAKSTKEIEHASYEEQVRENSGKVATYVPFRNGLMLSVAASL 117
Query: 123 AYRL---GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A + T I IG D +G Y DC + ++++ AI +G V + P K
Sbjct: 118 AASIFENEETGIYIGAHADDAAGNAYADCSEEFLKSMNDAIMIGTYEKVKLVFPFANTNK 177
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ E + +CY G C +C C RQK + E K
Sbjct: 178 AGVVATGLKL------KTPYELTWSCYEGGEKP-------CGTCGTCIDRQKAFEENGVK 224
>gi|332716136|ref|YP_004443602.1| succinoglycan biosynthesis regulator [Agrobacterium sp. H13-3]
gi|325062821|gb|ADY66511.1| succinoglycan biosynthesis regulator [Agrobacterium sp. H13-3]
Length = 236
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + + +SFDYGQR+K EL+ K++
Sbjct: 2 KTIVICSGGLDSVSLAHKIAAEHELLALVSFDYGQRHKKELDFAADCAKRLG-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ + +G ++ S+LT ++ + + + +T VP RN I L A LA
Sbjct: 54 --VPHHVIDITTIGAHLTGSALTDDIDVPDGHYAEETMRSTVVPNRNAIMLTIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ I V D+ YPDCR I + +E VT+ P + + K
Sbjct: 112 QQADAVAIAVHGGDHFIYPDCRPGFIDSFNAMQAHALEGYADVTLFAPYVTVSKAAIVTD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A G E+ +CY G C C C R++ +
Sbjct: 172 AVKYG------TPFGETWSCYKGGS-------RHCGRCGTCVERREAF 206
>gi|328885754|emb|CCA58993.1| Queuosine Biosynthesis QueC ATPase [Streptomyces venezuelae ATCC
10712]
Length = 236
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 32/237 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+L+FSGG DS+ LD V LSF+YGQR+ EL + ++
Sbjct: 7 PRHAVLIFSGGLDSAVTAYKLLDAGVTVSLLSFNYGQRHVKELAQAATLADQLG------ 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATL 122
I+ L L I S + A+++ + +T VP RN I L AA
Sbjct: 61 ----VSHDIVDLTSLNRILGGSALTDPAIEVPHGHYRAETMRSTVVPNRNAIMLEIAAGA 116
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKKY 178
A G + G D++ YPDCR + IE A+ G E H+ + P + L K
Sbjct: 117 AVAAGADAVAFGAHSGDHAIYPDCRPEFFTLIEAAMKAGNEGHIVADFQLVAPFLQLTKA 176
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + + ++ + + +CY G C +C C R++ + E
Sbjct: 177 DIVREGARL------DVPFKLTWSCYEGGE-------LHCGACGTCVERREAFDEAG 220
>gi|149916375|ref|ZP_01904895.1| hypothetical protein RAZWK3B_12312 [Roseobacter sp. AzwK-3b]
gi|149809829|gb|EDM69681.1| hypothetical protein RAZWK3B_12312 [Roseobacter sp. AzwK-3b]
Length = 230
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 89/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + LSFDYGQR+ EL+ +++
Sbjct: 2 KTIVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHAKELDFAARCAERLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ L +G ++ S+LT ++ + + + T VP RN I L +A
Sbjct: 54 --VAHRVVDLRAVGAALTGSALTDDLDVPDGHYAEETMKITVVPNRNAIMLAVGFGMAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR D I A + + ++ V ++TP + K +
Sbjct: 112 QKADAVATAVHGGDHFIYPDCRPDFIAAFQAMEDHALDGVAKVQLYTPFVTGSKADIVTE 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E++ +CY G C C C R++ +
Sbjct: 172 GARHG------TPFEDTWSCYKGGE-------VHCGRCGTCVERREAF 206
>gi|15922650|ref|NP_378319.1| succinoglycan biosynthesis regulator [Sulfolobus tokodaii str. 7]
gi|74573079|sp|Q96Y49|QUEC2_SULTO RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=Archaeosine biosynthesis protein queC 2; AltName:
Full=PreQ(0) synthase 2
gi|15623440|dbj|BAB67428.1| 460aa long hypothetical succinoglycan biosynthesis regulator
[Sulfolobus tokodaii str. 7]
Length = 460
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 30/235 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
KK L++ SGG DS+ ++ L + + L F+Y +K E R V KKI E +
Sbjct: 236 KKIKKVLVIASGGLDSTVAATYLLRQGYEITLLHFNY--HHKAEEREREAV-KKIAEYLQ 292
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN------NLPNTFVPGRNIIFLVFA 119
+ + I H++L K ++D + +VP RN+IF A
Sbjct: 293 VPLIE------IDTDLFKIIGHTTLLKGGGEIVKDRLGEEGAEFAHEWVPARNLIFYSVA 346
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKK 177
LA G I G+ + YPD + +R V V P+ L K
Sbjct: 347 LALAEAYGYDAIASGINLEEAGAYPDNEMEFVRLFAKLSPYATGPNKKVEVMMPVGNLVK 406
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+E KL +IG L + +CY G + C C CY+R+ +
Sbjct: 407 HEIVKLGVEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRKMAFR 448
>gi|256827670|ref|YP_003151629.1| exsB protein [Cryptobacterium curtum DSM 15641]
gi|256583813|gb|ACU94947.1| exsB protein [Cryptobacterium curtum DSM 15641]
Length = 240
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 71/252 (28%), Positives = 109/252 (43%), Gaps = 43/252 (17%)
Query: 1 MNDIIKKAPS----ALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRL 54
M + AP+ AL+L SGG DS+TCL+ A+DRF V T+SF YGQR+ EL+
Sbjct: 1 MTRTNETAPASTAHALVLSSGGVDSTTCLALAVDRFGQANVSTVSFFYGQRHSRELDAAA 60
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSS---------LTKNVAMKIQDNNLPN 105
V + ++L LA + S+++ + A +++D+ PN
Sbjct: 61 AVAEHYG----------VHHYVLDLASVMHYSNNALMATSTQHVPHGSYAQQMEDDGHPN 110
Query: 106 TFVPGRNIIFLVFAATLAYRLGIT---NIVIGVCETDYSG--YPDCRHDTIRAIETAINL 160
T+VP RN + L AA LA L + +G D +G YPDC + AI+
Sbjct: 111 TYVPFRNGLMLSAAAALAASLFPDTSCALYLGAHADDAAGNAYPDCSPAFTAHMGRAISF 170
Query: 161 GMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
G +V + TP + K + +G + E + +CY G C +
Sbjct: 171 GTYGNVRLETPFVNQNKAQVVAEGLRLG------VPYEMTWSCYEGGEKP-------CGT 217
Query: 221 CPACYLRQKGWM 232
C C R +
Sbjct: 218 CATCLDRIAAFE 229
>gi|190893557|ref|YP_001980099.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CIAT 652]
gi|254764371|sp|B3Q0Y0|QUEC_RHIE6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|190698836|gb|ACE92921.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CIAT 652]
Length = 236
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + +SFDYGQR++ EL+ ++
Sbjct: 2 KTIVVCSGGLDSVSLAHKMAAEQQLIGLVSFDYGQRHRKELDFAARCAARLA-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
HI+ +A +G +S S+LT NV + + + T VP RN I L A LA
Sbjct: 54 --VPHHIIDIAAIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A + N ++ + V + P + + K
Sbjct: 112 QKADAVAVAVHGGDHFIYPDCRPGFIDAFQRMQNAALDGYASVRLLAPYVDVSKAAIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E+ +CY G R C C C R++ +
Sbjct: 172 GEKHA------TPFAETWSCYKGGR-------LHCGRCGTCVERREAF 206
>gi|298675033|ref|YP_003726783.1| exsB protein [Methanohalobium evestigatum Z-7303]
gi|298288021|gb|ADI73987.1| exsB protein [Methanohalobium evestigatum Z-7303]
Length = 235
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 19/233 (8%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIV----ELMP 65
A+ L S G DS L+ A + D + FDYGQR K E+E + +
Sbjct: 3 AISLLSSGLDSVAALTIAREITDVKLAIIFDYGQRSAKKEIEYSKKICTHFGIDYEVIKL 62
Query: 66 KWKDSLGEDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
W + + ++ + +++ ++ A + + + N +VP RN IFL +A A
Sbjct: 63 DWLEKITNTSLVNKKEDVPELTLDDVSGKNATEKTEESAKNVWVPNRNGIFLNISAGFAE 122
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
L +++G + +PD + + ++ T ++ + V + PL+ K + A
Sbjct: 123 SLECEYVIVGFNSEEGQTFPDNSPEFVDSMNTCLSYSTRNGVKILAPLVDYNKKDIINQA 182
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G LE S +CY G+ C C +C R+ + E K
Sbjct: 183 LKSG------TPLEWSWSCYHGRD-------LPCGVCESCIRRKHAFNELGIK 222
>gi|209551069|ref|YP_002282986.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|254764372|sp|B5ZR38|QUEC_RHILW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|209536825|gb|ACI56760.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 236
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + +SFDYGQR++ EL+ ++
Sbjct: 2 RTIVVCSGGLDSVSLAHKIAAEQQLIGLVSFDYGQRHRKELDFAARCAARLA-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
HI+ ++ +G +S S+LT ++ + + + T VP RN I L A LA
Sbjct: 54 --VPHHIIDISAIGGHLSGSALTDDIEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A + N ++ + V + P + + K
Sbjct: 112 QKADAVAVAVHGGDHFIYPDCRPGFIDAFQRMQNEALDGYASVRLLAPYVEVSKAAIVTD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E+ +CY G R C C C R++ +
Sbjct: 172 GEKHA------TPFAETWSCYKGGR-------LHCGRCGTCVERREAF 206
>gi|220926070|ref|YP_002501372.1| exsB protein [Methylobacterium nodulans ORS 2060]
gi|219950677|gb|ACL61069.1| exsB protein [Methylobacterium nodulans ORS 2060]
Length = 251
Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL++ SGGQDS+TCL WA +FD V L+FDYGQR+ ELE + V K
Sbjct: 3 RALVVLSGGQDSTTCLFWAKQQFDEVHALTFDYGQRHARELEAAVTVAK---------MA 53
Query: 70 SLGEDHILPLAILGDIS------HSSLTKNVAMKIQDNNLPN----TFVPGRNIIFLVFA 119
+ +L L L + ++L + + + + + + TFVP RN +FL A
Sbjct: 54 GVASHEVLKLPDLLRSTSPLVDPGAALEQYASYEQMEETIGDRVELTFVPMRNALFLTIA 113
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWLKKY 178
A A L N+V GVC+ D + YPDCR D + A + IN + +HTPLM L K
Sbjct: 114 ANRAVALDCFNLVTGVCQQDNANYPDCRLDFVLAQQGTINQALGVGRFRIHTPLMHLTKA 173
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
ET KLA G L SHT Y G A LR +G+ +
Sbjct: 174 ETVKLA---GSLPGCWEALAYSHTAYDGAYPPT-------GRDHATLLRAEGFRQAG 220
>gi|192896495|gb|ACF06644.1| ToyM [Streptomyces rimosus]
Length = 238
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 30/232 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA+++ SGG DS+T L+ R+ ++ DYGQR++ E++ +
Sbjct: 12 SAVVVLSGGMDSTTLLAHYAMLRYRLTAVTVDYGQRHRREIDAARTIA----------GH 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E H++ L+ +G + S + + + ++ T VP RN I A A
Sbjct: 62 YGAEHHVVDLSGIGVLLGGSALTDSEVDVPSGHYAEESMRATVVPNRNAILANVAVGAAV 121
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWK 182
+ +G+ D+ YPDCR + A++ + + E V P + K + +
Sbjct: 122 ARQAGIVALGMHAGDHFVYPDCRPAFVEALDGLVRVANEGFATPRVEAPFIHWSKTDIAR 181
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ L++S +CY G C +C CY R++ + +
Sbjct: 182 YGSRLEA------PLDKSWSCYRGGE-------LHCGTCGTCYERREAFRDA 220
>gi|257064933|ref|YP_003144605.1| exsB protein [Slackia heliotrinireducens DSM 20476]
gi|256792586|gb|ACV23256.1| exsB protein [Slackia heliotrinireducens DSM 20476]
Length = 235
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 98/246 (39%), Gaps = 41/246 (16%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ A++L SGG DS+TCL+ A ++F D V ++S YGQR+ EL C V K
Sbjct: 4 TDQPTRAMVLSSGGVDSTTCLALACEQFGADNVTSVSVFYGQRHNKELACADAVAKHYG- 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----------DNNLPNTFVPGR 111
H+L LA + S+++L + +I ++ + NT+VP R
Sbjct: 63 ---------VAHHVLDLANILANSNNALMADSTQEIDHRDYATQIAENEDGMVNTYVPFR 113
Query: 112 NIIFLVFAATLAYRLG-----ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
N + L LA L + + YPDC + AI AI LG
Sbjct: 114 NGLMLSAVTALAISLNPTEKTAIYLGAHADDAAGGAYPDCTPEFFEAIARAIELGSYGKA 173
Query: 167 TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
+ P + + K + +G + E + +CY G C +C C
Sbjct: 174 VLREPFVNVNKADVVACGLKLG------VPYELTWSCYEGGDAP-------CGTCATCID 220
Query: 227 RQKGWM 232
R K +
Sbjct: 221 RAKAFA 226
>gi|229823793|ref|ZP_04449862.1| hypothetical protein GCWU000282_01095 [Catonella morbi ATCC 51271]
gi|229786832|gb|EEP22946.1| hypothetical protein GCWU000282_01095 [Catonella morbi ATCC 51271]
Length = 217
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 28/226 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+L SGG DSST L+ AL R +V +S Y Q++ ++ +
Sbjct: 4 VLLSGGADSSTALALALSRDPQVVAVSIAYNQQHAQ---------AELAAAKAVAQHYGV 54
Query: 73 EDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ IL LA + S S+L + D PNT V RN +F+ +LA +LG
Sbjct: 55 DHRILDLAAIFADSRSALNAANDLVASQGDYADQEAPNTEVEFRNGVFIAILTSLAMQLG 114
Query: 128 ITNIVIGVCETDYS-GYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ G D YPDC D + A++ A+ LG V + TP + K + KL +
Sbjct: 115 ADALYFGAHLDDSGVIYPDCSPDFVAAMDQAVRLGTGGKVRLETPFGQMTKADIVKLGLE 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+G + +++CY G + C C C R+K +
Sbjct: 175 LG------VPYHLTYSCYAGSQPP-------CGQCGTCIDRRKAFE 207
>gi|146303330|ref|YP_001190646.1| exsB protein [Metallosphaera sedula DSM 5348]
gi|145701580|gb|ABP94722.1| exsB protein [Metallosphaera sedula DSM 5348]
Length = 469
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 18/229 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ AL++ SGG DS+ + + +V L F+Y +K E + R VRK I +
Sbjct: 238 QPRRRALVIASGGLDSTVAATKMIREGYQVTLLHFNY--HHKAEEKEREAVRK-IASYLN 294
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ D + + + + +VP RN IF A +A
Sbjct: 295 ADLMEINTDLFSLIGNATLLKGGGEIVKDRKGEEGAEFAHEWVPARNAIFFTVAMAIAEA 354
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVHTPLMWLKKYETWKL 183
G IV G+ + YPD + +R + +G E V V P+ L K+E KL
Sbjct: 355 KGYDAIVSGINLEEAGAYPDNEMEFVRMFQRLSPYAVGPEKRVDVLMPVGNLVKHEIVKL 414
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+IG L + +CY G C C CY+R+ +
Sbjct: 415 GLEIGA------PLHLTWSCYEGGEK-------HCGKCGPCYMRRVAFE 450
>gi|116753752|ref|YP_842870.1| exsB protein [Methanosaeta thermophila PT]
gi|121693804|sp|A0B6A6|QUEC_METTP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|116665203|gb|ABK14230.1| preQ(0) biosynthesis protein QueC [Methanosaeta thermophila PT]
Length = 224
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 21/230 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWK 68
A+ L SGG DS+ + A V + YGQ+ + E+E + I
Sbjct: 3 RAVCLCSGGLDSTVAATIARRSGMDVYLIHVSYGQQAERREIEAIERIADAIGASDLMCS 62
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+I L G + + + + + P T+V RN + L AA A LG
Sbjct: 63 RIDLFRNISALTTQGAR----IPRGEEVSLDSESTPPTWVYCRNTVLLSMAAAYAEYLGA 118
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---SHVTVHTPLMWLKKYETWKLAQ 185
+I +G + YPD R + + + + V PL+ ++K + +L
Sbjct: 119 HSIYVGFNAEEAMSYPDNRPEFVEQFNALLEKAVASFSRPPKVVAPLVDMRKKDIVRLGA 178
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
DI LE + +CYL C +C +C R++G++E
Sbjct: 179 DIKA------PLELTWSCYLNGE-------IHCGTCESCQHRRRGFVEAG 215
>gi|254713616|ref|ZP_05175427.1| exsB protein [Brucella ceti M644/93/1]
gi|254716030|ref|ZP_05177841.1| exsB protein [Brucella ceti M13/05/1]
gi|261217798|ref|ZP_05932079.1| queuosine biosynthesis protein queC [Brucella ceti M13/05/1]
gi|261321354|ref|ZP_05960551.1| queuosine biosynthesis protein queC [Brucella ceti M644/93/1]
gi|260922887|gb|EEX89455.1| queuosine biosynthesis protein queC [Brucella ceti M13/05/1]
gi|261294044|gb|EEX97540.1| queuosine biosynthesis protein queC [Brucella ceti M644/93/1]
Length = 232
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 86/228 (37%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + LSFDYG R+K EL+ K++
Sbjct: 2 KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGLRHKKELDFAQACAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A +T ++ V + P + K +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G C C C R++ +
Sbjct: 172 G------AKYRTPFEATWSCYKGAD-------RHCGRCGTCVERREAF 206
>gi|297561372|ref|YP_003680346.1| exsB protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296845820|gb|ADH67840.1| exsB protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 243
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 30/233 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ +++FSGG DS+T L+ R+ ++ +YGQR+ E++ + +
Sbjct: 17 TVVVVFSGGMDSTTLLAHFAALRFRLVAVTVEYGQRHGKEVDAARAIARHYGA------- 69
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLAY 124
E HIL +A G + S + +++ D ++ +T VP RN + AA++A
Sbjct: 70 ---EHHILGIAGFGPLLRGSALTDARVEVPDGHYAEESMRDTVVPNRNAVLANLAASVAV 126
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWK 182
+ +G+ D+ YPDCR + A+ + + E V P M K + +
Sbjct: 127 ARRAGTVALGMHSGDHFVYPDCRPAFVDALRHLVGVANEGFAAPRVEAPFMAWSKADIAR 186
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G LE S +CY G C +C CY R++ + E
Sbjct: 187 HGVRLGA------PLEHSWSCYKGGD-------IHCGTCGTCYERREAFQEAG 226
>gi|20092990|ref|NP_619065.1| succinoglycan biosynthesis regulator [Methanosarcina acetivorans
C2A]
gi|74527841|sp|Q8TIF3|QUEC_METAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|19918307|gb|AAM07545.1| succinoglycan biosynthesis regulator [Methanosarcina acetivorans
C2A]
Length = 231
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 19/234 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMPK 66
A+ L S G DS L+ A + + ++FDYGQR ++E ++C I ++ K
Sbjct: 2 KAITLLSSGLDSVAALAIAAESLEIEMAITFDYGQRAGQREIEYSRKVCEHYGIEHIVIK 61
Query: 67 --WKDSLGEDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + ++ + +S + + I + + +VP RN + L A + A
Sbjct: 62 LDWLAGITNTSLVNRGEDVPALSFEDIDEAAPAAITEASAKAVWVPNRNGVMLNIAGSFA 121
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+V+G + +PD + A++ A + ++ V V PL+ L K E K
Sbjct: 122 ESRDCDYLVVGFNGEEAGTFPDNSMAYVEAMDNAFSYSTQNGVRVLAPLIELGKTEIVKK 181
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A ++ LE S +CY G+ C C +C R + + K
Sbjct: 182 ALEVKA------PLEYSWSCYHGEETP-------CGGCESCVRRARAFKNTGTK 222
>gi|294851210|ref|ZP_06791883.1| exsB protein [Brucella sp. NVSL 07-0026]
gi|294819799|gb|EFG36798.1| exsB protein [Brucella sp. NVSL 07-0026]
Length = 232
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 86/228 (37%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L++ SGG DS + + LSFDYGQR+K EL+ K++
Sbjct: 2 KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT +V + + + T V RN I L A +A
Sbjct: 54 --VPHQIIDIRTIGASLTGSALTDDVDVPDGHYAEETMKVTVVSNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A +T ++ V + P + K +
Sbjct: 112 QKADAVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G C C C R++ +
Sbjct: 172 G------AKYRTPFEATWSCYKGAD-------RHCGRCGTCVERREAF 206
>gi|86359301|ref|YP_471193.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CFN 42]
gi|110816251|sp|Q2K3X0|QUEC_RHIEC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|86283403|gb|ABC92466.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CFN 42]
Length = 236
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + +SFDYGQR++ EL+ ++
Sbjct: 2 KTIVVCSGGLDSVSLAHRTASEEQLIGLVSFDYGQRHRKELDFAAKCAARLA-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
HI+ +A +G +S S+LT NV + + + T VP RN I L A LA
Sbjct: 54 --VPHHIIDIAAIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A + N ++ + V + P + + K
Sbjct: 112 QKADAVAVAVHGGDHFIYPDCRPGFIDAFQRMQNEALDGYASVKLLAPYVEVSKAAIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 172 GTRHG------TPFAETWSCYKGGS-------LHCGRCGTCVERREAF 206
>gi|15891587|ref|NP_357259.1| succinoglycan biosynthesis regulator [Agrobacterium tumefaciens
str. C58]
gi|81489986|sp|Q8UAM7|QUEC_AGRT5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|15160023|gb|AAK90044.1| succinoglycan biosynthesis regulator [Agrobacterium tumefaciens
str. C58]
Length = 236
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + + +SFDYGQR+K EL+ K++
Sbjct: 2 KTIVICSGGLDSVSLAHKIAAEHELLALVSFDYGQRHKKELDFAADCAKRLG-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H++ + +G ++ S+LT ++ + + + +T VP RN I L A LA
Sbjct: 54 --VPHHLIDIGTIGAHLTGSALTDDIDVPDGHYAEETMRSTVVPNRNAIMLTIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ I V D+ YPDCR I + +E VT+ P + + K
Sbjct: 112 QQADAVAIAVHGGDHFIYPDCRPGFIGSFNAMQAHALEGYADVTLFAPYVTVSKAAIVTD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
A G E+ +CY G C C C R++ +
Sbjct: 172 AVKYG------TPFGETWSCYKGG-------LRHCGRCGTCVERREAF 206
>gi|149203606|ref|ZP_01880575.1| hypothetical protein RTM1035_06058 [Roseovarius sp. TM1035]
gi|149142723|gb|EDM30765.1| hypothetical protein RTM1035_06058 [Roseovarius sp. TM1035]
Length = 232
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++ SGG DS + + LSFDYGQR+ E+E +++
Sbjct: 4 IVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHVKEVEYAAACARRLG---------- 53
Query: 72 GEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ + +G +S S+LT +VA+ + + T VP RN I L A +A
Sbjct: 54 VPHKVVDIRQIGAALSGSALTDDVAVPDGHYAEETMKITIVPNRNAIMLAIAFGMAAAEK 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR I A + + +E + V ++TP + K +
Sbjct: 114 ADAVATAVHGGDHFIYPDCRPGFINAFQAMQDAALEGYAEVKLYTPYLQGSKGDIVTDGA 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 174 KHG------TPFAETWSCYKGGAK-------HCGRCGTCVERREAF 206
>gi|52550044|gb|AAU83893.1| transcriptional regulator [uncultured archaeon GZfos34H9]
Length = 242
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 32/240 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+ + SGG DS+ + A + YGQR K++VE +
Sbjct: 1 MTKIAVCVCSGGIDSTVTATIAAKEGYELHFFHASYGQR-------AEAREKEVVEEIAA 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK-NVAMKI-------QDNNLPNTFVPGRNIIFLVF 118
+ + E L L ++ SSLT ++ + ++ P+T+VP RNII L
Sbjct: 54 YL-NAKELKFAELPFLKELGGSSLTDIARSVPVGKEVNLDEEKETPSTWVPCRNIILLAN 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWL 175
A+ A + I +G + YPD + + + + + + PL+ L
Sbjct: 113 ASAFAEVISADAIFVGFNAEEARSYPDNEKEFVDRYNAVLEKAVAYYCRPPTLKAPLVDL 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E K ++ L+ S++CYLG + C C +C R++G+ E
Sbjct: 173 LKPEIIKKGVEVKA------PLQLSYSCYLGDKK-------HCGICESCQHRRRGFKEAG 219
>gi|15896988|ref|NP_341593.1| transcription regulator (exsB) related protein [Sulfolobus
solfataricus P2]
gi|284173860|ref|ZP_06387829.1| transcription regulator (exsB) related protein [Sulfolobus
solfataricus 98/2]
gi|74543016|sp|Q981C9|QUEC_SULSO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|13813145|gb|AAK40383.1| Transcription regulator (exsB) related protein [Sulfolobus
solfataricus P2]
gi|261601641|gb|ACX91244.1| exsB protein [Sulfolobus solfataricus 98/2]
Length = 464
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 88/234 (37%), Gaps = 20/234 (8%)
Query: 3 DIIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
I++K L++ SGG DS+ + L V + F+Y +K E + R VRK I
Sbjct: 234 PIMEKRKKYRVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEKEREAVRK-I 290
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
E + + D + I + + +VP RN+IF +
Sbjct: 291 AEYLQIPLLEINTDLFKIIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSVSL 350
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKY 178
+A G I G+ + YPD + IR + + + P+ L K+
Sbjct: 351 AIAEAYGYDAIASGINLEEAGAYPDNEMEFIRMLNKLSPYATGPNKRIEILMPVGNLVKH 410
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
E KL +IG L + +CY G + C C CY+R+ +
Sbjct: 411 EIVKLGYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRKMAFR 451
>gi|327189841|gb|EGE56979.1| succinoglycan biosynthesis transcriptional regulator protein
[Rhizobium etli CNPAF512]
Length = 236
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + +SFDYGQR++ EL+ ++
Sbjct: 2 KTIVVCSGGLDSVSLAHKMAAEQQLIGLVSFDYGQRHRKELDFAARCAARLA-------- 53
Query: 70 SLGEDHILPLAILG-DISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
HI+ +A +G +S S+LT NV + + + T VP RN I L A LA
Sbjct: 54 --VPHHIIDIAAIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
+ + V D+ YPDCR I A + N ++ + V + P + + K
Sbjct: 112 QKADAVAVAVHGGDHFIYPDCRPGFIDAFQCMQNEALDGYASVRLLAPYVDVSKAAIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ E+ +CY G R C C C R++ +
Sbjct: 172 GEKHA------TPFAETWSCYKGGR-------LHCGRCGTCVERREAF 206
>gi|14520309|ref|NP_125784.1| hypothetical protein PAB2286 [Pyrococcus abyssi GE5]
gi|74548110|sp|Q9V2I3|QUEC_PYRAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|5457524|emb|CAB49015.1| Hypothetical protein [Pyrococcus abyssi GE5]
Length = 239
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 28/238 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++LFSGG DS+ L WAL +D V L+ +YG + + V K+ E +
Sbjct: 2 RRAVVLFSGGLDSTASLYWALKHYDEVIMLTINYGSQEER-------VTNKVAEFFSREL 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-------------NNLPNTFVPGRNIIF 115
+ I+ + L + S + +K V + + + ++P RN +
Sbjct: 55 N--VPLKIVKIDFLHEFSKIAGSKLVEGNVPEVTARELEDFEKAKETARSVWIPARNFVL 112
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA+L LG +I++G + + +PD + + I +A+ + V V PL+ L
Sbjct: 113 IGVAASLLDALGGGDIIVGFNKEEGETFPDNTKEFVDRINSALKYATMNEVRVVAPLIEL 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K +L +++ N E S++CY + C C +C R +G +E
Sbjct: 173 DKKGIARLLKEL------NAKYEYSNSCYNPQGFTEDGKPIHCGRCESCVRRHRGLIE 224
>gi|110636377|ref|YP_676585.1| exsB protein [Mesorhizobium sp. BNC1]
gi|118574288|sp|Q11B05|QUEC_MESSB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|110287361|gb|ABG65420.1| exsB protein [Chelativorans sp. BNC1]
Length = 232
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 29/225 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++ SGG DS + +SFDYGQR+K EL+ +++
Sbjct: 5 VICSGGLDSVSLAHKVAVEKTLAGLISFDYGQRHKKELDFARACAQRLD----------V 54
Query: 73 EDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
I+ + +G+ ++ S+LT + + ++ + T VP RN I L A +A
Sbjct: 55 RHMIIDIRAVGEGLAGSALTDEIDVPNGHYAEDTMRITVVPNRNAIMLAIAFGVAAAQNA 114
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV--HTPLMWLKKYETWKLAQD 186
+ V D+ YPDCR I A + ++ + + + P + L K
Sbjct: 115 DAVATAVHGGDHFIYPDCRPGFIEAFQAMQAQALDGYAKIALYAPYVNLSKANIVSDGVR 174
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G + + C C C R++ +
Sbjct: 175 ------HRTPFEATWSCYKGGK-------HHCGRCGTCVERREAF 206
>gi|85707172|ref|ZP_01038259.1| hypothetical protein ROS217_16351 [Roseovarius sp. 217]
gi|85668331|gb|EAQ23205.1| hypothetical protein ROS217_16351 [Roseovarius sp. 217]
Length = 232
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++ SGG DS + + LSFDYGQR+ E+E +++
Sbjct: 4 IVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHVKEVEYAAACARRLG---------- 53
Query: 72 GEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ + +G +S S+LT +VA+ + + T VP RN I L A +A
Sbjct: 54 VPHKVVDIRQIGAALSGSALTDDVAVPDGHYAEETMKITIVPNRNAIMLAIAFGMAAAEK 113
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
+ V D+ YPDCR I A + + +E + V ++TP + K +
Sbjct: 114 ADAVATAVHGGDHFIYPDCRPGFINAFQAMQDAALEGYAEVKLYTPYLQGSKGDIVTDGA 173
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
G E+ +CY G C C C R++ +
Sbjct: 174 KHG------TPFAETWSCYKGGA-------RHCGRCGTCVERREAF 206
>gi|323475431|gb|ADX86037.1| exsB protein [Sulfolobus islandicus REY15A]
Length = 464
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 85/229 (37%), Gaps = 18/229 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K L++ SGG DS+ + L V + F+Y +K E R VRK I E +
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEREREAVRK-IAEHLQ 295
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ D + I + + +VP RN+IF A +A
Sbjct: 296 VPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSAALAIAEA 355
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKL 183
G I G+ + YPD + IR + V V P+ L K+E KL
Sbjct: 356 YGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPVGNLMKHEIVKL 415
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+IG L + +CY G + C C CY+R+ +
Sbjct: 416 GYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRRVAFK 451
>gi|260892492|ref|YP_003238589.1| exsB protein [Ammonifex degensii KC4]
gi|260864633|gb|ACX51739.1| exsB protein [Ammonifex degensii KC4]
Length = 219
Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 91/240 (37%), Gaps = 33/240 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++L SGG DS+ CL+ A++ + V +L+FDYGQ +K+I +
Sbjct: 2 KSVVLLSGGLDSAVCLACAVEDGEVVLSLTFDYGQ---------AAAKKEIEAASKLSRH 52
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----------LPNTFVPGRNIIFLVF 118
+L L L ++ ++ M + + +VP RN +FL
Sbjct: 53 YGVPHQVLHLPFLRELLPPAMASGEGMPEPETRELDDKVSADKLARSVWVPNRNALFLSI 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A A LG +V G + +PD + A+ + V V + L K
Sbjct: 113 GAAFAESLGAEAVVAGFNAEEAQSFPDNSPPFVDAMNEVLRYSTRGKVRVISYTQRLDKK 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
+L + +G L +CY + C CP+C + E +E++
Sbjct: 173 AIVRLGKRLG------LPFPFIWSCYRAGEEM-------CGRCPSCLRYFRALREAEEEW 219
>gi|332299348|ref|YP_004441269.1| exsB protein [Porphyromonas asaccharolytica DSM 20707]
gi|332176411|gb|AEE12101.1| exsB protein [Porphyromonas asaccharolytica DSM 20707]
Length = 217
Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 30/228 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
++L+ SGG DS+T L + + FDYG ++ EL + +++
Sbjct: 2 RNSLIAHSGGVDSTTLLYEYREE--VACAVGFDYGSKHNARELAAAKAICRELD------ 53
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLA 123
I+PLA + + S L + + N+ +T VP RN I L A LA
Sbjct: 54 ----IPYLIIPLAFIEEYFRSDLLLSGGEMQLGDYSEENMRSTVVPFRNGIMLSVLAGLA 109
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ ++I D++ YPDCR ++ + AI G + V + P L K E
Sbjct: 110 ESRDLQQVLIANHFGDHAIYPDCRESFVKPMGEAITAGTSNGVKLVAPYTALTKAEIVAR 169
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++++CY G C C C R +
Sbjct: 170 GTRLG------VPYGKTYSCYQGGE-------RHCGRCGTCRERHDAF 204
>gi|227828356|ref|YP_002830136.1| exsB protein [Sulfolobus islandicus M.14.25]
gi|229585586|ref|YP_002844088.1| exsB protein [Sulfolobus islandicus M.16.27]
gi|238620549|ref|YP_002915375.1| exsB protein [Sulfolobus islandicus M.16.4]
gi|227460152|gb|ACP38838.1| exsB protein [Sulfolobus islandicus M.14.25]
gi|228020636|gb|ACP56043.1| exsB protein [Sulfolobus islandicus M.16.27]
gi|238381619|gb|ACR42707.1| exsB protein [Sulfolobus islandicus M.16.4]
gi|323478152|gb|ADX83390.1| exsB protein [Sulfolobus islandicus HVE10/4]
Length = 464
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 85/229 (37%), Gaps = 18/229 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K L++ SGG DS+ + L V + F+Y +K E R VRK I E +
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEREREAVRK-IAEHLQ 295
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ D + I + + +VP RN+IF A +A
Sbjct: 296 VPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSAALAIAEA 355
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKL 183
G I G+ + YPD + IR + V V P+ L K+E KL
Sbjct: 356 YGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPVGNLVKHEIVKL 415
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+IG L + +CY G + C C CY+R+ +
Sbjct: 416 GYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRRVAFK 451
>gi|229579998|ref|YP_002838398.1| exsB protein [Sulfolobus islandicus Y.G.57.14]
gi|229581341|ref|YP_002839740.1| exsB protein [Sulfolobus islandicus Y.N.15.51]
gi|284998612|ref|YP_003420380.1| exsB protein [Sulfolobus islandicus L.D.8.5]
gi|228010714|gb|ACP46476.1| exsB protein [Sulfolobus islandicus Y.G.57.14]
gi|228012057|gb|ACP47818.1| exsB protein [Sulfolobus islandicus Y.N.15.51]
gi|284446508|gb|ADB88010.1| exsB protein [Sulfolobus islandicus L.D.8.5]
Length = 464
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 85/229 (37%), Gaps = 18/229 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K L++ SGG DS+ + L V + F+Y +K E R VRK I E +
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEREREAVRK-IAEHLQ 295
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ D + I + + +VP RN+IF A +A
Sbjct: 296 VPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSAALAIAEA 355
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKL 183
G I G+ + YPD + IR + V V P+ L K+E KL
Sbjct: 356 YGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPVGNLVKHEIVKL 415
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+IG L + +CY G + C C CY+R+ +
Sbjct: 416 GYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRRVAFK 451
>gi|258646635|ref|ZP_05734104.1| ExsB protein [Dialister invisus DSM 15470]
gi|260404056|gb|EEW97603.1| ExsB protein [Dialister invisus DSM 15470]
Length = 233
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 29/237 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS+TCLS A++ + V T S YGQ++K EL+ V
Sbjct: 2 KKAIILSSGGVDSTTCLSVAVNALGAENVSTASIFYGQKHKKELDAARAVA----AYYHV 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNL--PNTFVPGRNIIFLVFAAT 121
I+ + +SHS+ + K+ +I + +T+VP RN + + AA+
Sbjct: 58 PHYEFDLAQIMQYSNCSLLSHSTESIVHKSYGEQIAEKGAGKVSTYVPFRNGLMISVAAS 117
Query: 122 LA---YRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
LA Y T+I +G D +G Y DC ++A+ A+ +G V + P
Sbjct: 118 LAAGIYEEEETDIYVGAHGDDAAGEAYADCSPQFLKAMGEAVAVGTYGKVHLVFPFADKN 177
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K +G E + +CY G C C C R K + E
Sbjct: 178 KTGVVAEGLKLG------TPYELTWSCYEGGDTP-------CGECGTCIDRAKAFAE 221
>gi|325969442|ref|YP_004245634.1| exsB protein [Vulcanisaeta moutnovskia 768-28]
gi|323708645|gb|ADY02132.1| exsB protein [Vulcanisaeta moutnovskia 768-28]
Length = 495
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 23/229 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--MP 65
L++ SGG DS+T ++ L + V L F+YG R + + + + K+I E +P
Sbjct: 251 KRRVLVIASGGLDSTTAATYLLKQGYDVALLHFNYGHRAETQEDRAI---KRIAEFHNVP 307
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++ ++ I+ + L V + + +VP RN +F+ A +A
Sbjct: 308 LFEVNMDFFKIVRHSPL---LGDGEINRVDEGREGAEFAHEWVPARNFVFIALATAIAEA 364
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
G I G+ + YPD + IR + + +G HV + P+ L K+E +L
Sbjct: 365 YGYDYIATGINLEESGAYPDNEMEFIRLLNRVMPYAVGPNKHVELIMPVGHLVKHEIVRL 424
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ V+ L + +CY C C CY+R+ +
Sbjct: 425 GLE------VDAPLHLTWSCYDNGEK-------HCGRCGPCYMRRLAFK 460
>gi|305663007|ref|YP_003859295.1| Queuosine synthesis [Ignisphaera aggregans DSM 17230]
gi|304377576|gb|ADM27415.1| Queuosine synthesis [Ignisphaera aggregans DSM 17230]
Length = 286
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 31/254 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + K A+ + SGG DS + L R V LSFDYGQ+ EL + +KI
Sbjct: 7 VEPNVVKPCVAVAVVSGGPDSICYMVRWLYRGCDVYALSFDYGQKGSKELRVVSDLLRKI 66
Query: 61 VELMPKWK-DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + E I+ ++ + ++ + + ++ +++ P+ VP RNI+ L A
Sbjct: 67 SRIAVDRGWGRVVEHRIIDMSFMKNLWRGTQLTDESVDVEETYAPSVVVPIRNIVMLSIA 126
Query: 120 ATLAY-------RLGITNIVIG----VCETDYSG---YPDCRHDTIRAIETAINLG---M 162
AY L I I + DYS YPDC + I AI+ A L M
Sbjct: 127 TAYAYTLLEQNPSLNIYVIYGAQYNDIVPRDYSYEPRYPDCSPECIEAIQLAYRLCHFRM 186
Query: 163 ESHVTVHTPLMW-LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSC 221
+ + +P + K + K+ +D+ G + ++ +CYL Y C C
Sbjct: 187 LRKIEIWSPSREGMGKPDILKMCRDLIGDL-----IYDTWSCYLSHD-------YHCGRC 234
Query: 222 PACYLRQKGWMEFK 235
+C R + ++E +
Sbjct: 235 ESCRNRHRAFIEAE 248
>gi|70606119|ref|YP_254989.1| hypothetical protein Saci_0280 [Sulfolobus acidocaldarius DSM 639]
gi|110816268|sp|Q4JBY3|QUEC_SULAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|68566767|gb|AAY79696.1| conserved protein [Sulfolobus acidocaldarius DSM 639]
Length = 462
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 19/230 (8%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K L++ SGG DS+ ++ + + V L F+Y +K E + R VRK I E +
Sbjct: 237 KNKKRILVVASGGLDSTVAATYLVRQGHEVTLLHFNY--HHKAEEKEREAVRK-ISEYLN 293
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAY 124
+ D + I SS K ++ + +VP RN+IF A +A
Sbjct: 294 VPFVEIDTDLFKIVGHSTLIKGSSGEIVKDRKGEEGAEFAHEWVPARNLIFFSVALAMAE 353
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWK 182
G I G+ + YPD + +R + +G V V P+ L K+E K
Sbjct: 354 AYGFDAIASGINLEEAGAYPDNEMEFVRMFSRLVPYAVGPNKKVEVLMPVGNLVKHEIVK 413
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L I + L + +CY G C C CY+R+ +
Sbjct: 414 LGVQI------DAPLHLTWSCYEGGNK-------HCGKCGPCYMRKVAFE 450
>gi|126737389|ref|ZP_01753124.1| ExsB [Roseobacter sp. SK209-2-6]
gi|126721974|gb|EBA18677.1| ExsB [Roseobacter sp. SK209-2-6]
Length = 215
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 29/211 (13%)
Query: 27 WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGD-I 85
+ +SFDYGQR++ EL+ +++ I+ + +G +
Sbjct: 1 MVAEEHQLTRLVSFDYGQRHRKELDYAAAAAERLG----------VPHDIIDMRSIGASL 50
Query: 86 SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSG 142
+ S+LT ++ + ++ ++ T VP RN I L A +A G + V D+
Sbjct: 51 TGSALTDDIDVPDGHYEEESMKVTVVPNRNAIMLTIAYGIAAANGDEAVATAVHGGDHFI 110
Query: 143 YPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEES 200
YPDCR + A + ++ V ++TP + K + N E+
Sbjct: 111 YPDCRPEFTEAFDAMQRAALDGYADVQLYTPFVHRSKADIVTAG------AKHNTPFAET 164
Query: 201 HTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+CY G + C C C R++ +
Sbjct: 165 WSCYKGGEHQ-------CGRCGTCVERREAF 188
>gi|156937660|ref|YP_001435456.1| exsB protein [Ignicoccus hospitalis KIN4/I]
gi|156566644|gb|ABU82049.1| exsB protein [Ignicoccus hospitalis KIN4/I]
Length = 260
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 52/251 (20%)
Query: 14 LFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L SGG DS+T + A+++F D L+ YGQR+ EL+ V K
Sbjct: 6 LVSGGMDSATAFADAINKFNPDVKVALTVVYGQRHARELKAAAEVAKFYGA--------- 56
Query: 72 GEDHILPLAILGDISH--SSLTKNVAMKIQDNNLP----NTFVPGRNIIFLVFAATLAYR 125
+ ++ L+ L + S+L + + +P T+VP RN + L A + +
Sbjct: 57 -QHLVVDLSDLFEKVKEVSALLGGRGVPEAEELVPGLVPPTYVPQRNAVLLASAGAILEK 115
Query: 126 L------GITNIVIGVCETDYSG----YPDCRHDTIRAIETAINLGM-----------ES 164
L G+ I +G TDY+ YPD R + + A+E A+N G E+
Sbjct: 116 LMIERNDGLGVISVGFHGTDYAPGEPVYPDTRPEFVEAMERALNEGSSVVFNFKRAGREA 175
Query: 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
+T++ P + LKK + K A ++G + LE + TCY G C +CPAC
Sbjct: 176 KITIYAPFVRLKKKDVVKRALELG------VPLELTWTCYRGGDRP-------CGTCPAC 222
Query: 225 YLRQKGWMEFK 235
R + +ME
Sbjct: 223 VSRLRAFMEAG 233
>gi|227831113|ref|YP_002832893.1| exsB protein [Sulfolobus islandicus L.S.2.15]
gi|227457561|gb|ACP36248.1| exsB protein [Sulfolobus islandicus L.S.2.15]
Length = 464
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 84/229 (36%), Gaps = 18/229 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K L++ SGG DS+ + L V + F+Y +K E R VR I E +
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY--HHKAEEREREAVRN-IAEHLQ 295
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ D + I + + +VP RN+IF A +A
Sbjct: 296 VPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSAALAIAEA 355
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKL 183
G I G+ + YPD + IR + V V P+ L K+E KL
Sbjct: 356 YGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPVGNLVKHEIVKL 415
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+IG L + +CY G + C C CY+R+ +
Sbjct: 416 GYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRRVAFK 451
>gi|307594719|ref|YP_003901036.1| exsB protein [Vulcanisaeta distributa DSM 14429]
gi|307549920|gb|ADN49985.1| exsB protein [Vulcanisaeta distributa DSM 14429]
Length = 496
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 19/223 (8%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS+T ++ L + V L F+YG R + + + + ++I E + +
Sbjct: 256 LVIASGGLDSTTAATYLLKQGYDVALLHFNYGHRAETQEDRAI---RRIAEFLGVPLLEV 312
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
D + + + + V + + +VP RN +F+ A +A G I
Sbjct: 313 SMDFFKVVRHSPLLGDGEINR-VDEGREGAEFAHEWVPARNFVFIALATAIAEAYGYDYI 371
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
G+ + YPD + IR + + +G HV + P+ L K+E KL ++G
Sbjct: 372 ATGINLEEAGAYPDNEMEFIRLLNKVMPYAVGPNKHVELLMPVGHLVKHEIVKLGLEVGA 431
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L + +CY C C CY+R+ +
Sbjct: 432 ------PLHLTWSCYDNGE-------RHCGRCGPCYMRRWAFR 461
>gi|330835407|ref|YP_004410135.1| exsB protein [Metallosphaera cuprina Ar-4]
gi|329567546|gb|AEB95651.1| exsB protein [Metallosphaera cuprina Ar-4]
Length = 462
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 90/241 (37%), Gaps = 22/241 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K AL++ SGG DS+ + + +V L F+Y +K E R RK I +
Sbjct: 238 KPKRRALVIASGGLDSTVAATKMVKDGYQVTLLHFNY--HHKAEEREREATRK-IASYLN 294
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ D + + + + +VP RN IF A +A
Sbjct: 295 VDLIEVNTDVFTLIGESPLLKAGGEIVKERKGEEGAEFAHEWVPARNSIFFTVAMAIAEA 354
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVHTPLMWLKKYETWKL 183
G +V G+ + YPD + +R + +G V + P+ L K+E KL
Sbjct: 355 RGYDTLVSGINLEEAGAYPDNEMEFVRMFQRLSPYAVGPNKRVDIVMPVGNLVKHEIVKL 414
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
DIG L + +CY G C C CY+R+ + + +YQ
Sbjct: 415 GLDIGA------PLHLTWSCYEGGEK-------HCGRCGPCYMRKTAFEINGVKDPIEYQ 461
Query: 240 D 240
D
Sbjct: 462 D 462
>gi|86750585|ref|YP_487081.1| ExsB [Rhodopseudomonas palustris HaA2]
gi|86573613|gb|ABD08170.1| ExsB [Rhodopseudomonas palustris HaA2]
Length = 231
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+L SGG DS+TCL A V +L DYGQR VE+ +K
Sbjct: 24 RKKVLVLHSGGMDSTTCLLQAKAEGHDVASLGIDYGQRLLVEMMFAEGQCEKYS------ 77
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + + + N +++ +++ F+PGRNI+FL A +G
Sbjct: 78 ----IPRHVINVNWQK--AERQIPLNRSVEEMAHSVSPAFLPGRNIVFLGLGHAHAAGIG 131
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ IG+ D+SGYPDC + T +N+G + PL+ + K E +LA +
Sbjct: 132 ADELQIGLNCVDFSGYPDCTTQFYDSYCTMLNIGNPGGPKLVAPLLKMSKPEIARLASTL 191
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
G Q ++ +CY R C C AC L + W E K
Sbjct: 192 GLQ------RNDTWSCYRP--QIREGSIVACGECDACKLHEFAWQELK 231
>gi|291443190|ref|ZP_06582580.1| exsB protein [Streptomyces roseosporus NRRL 15998]
gi|291346137|gb|EFE73041.1| exsB protein [Streptomyces roseosporus NRRL 15998]
Length = 229
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 87/235 (37%), Gaps = 31/235 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + SGG DS V LS DYGQR++ E + +I
Sbjct: 9 RVIAIVSGGLDSVVLAHHLHAEGHEVHLLSIDYGQRHRKEHDYARIAADRIGA------- 61
Query: 70 SLGEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYR 125
E I+ L+ + + +S V + Q P + VP RN+I L A A
Sbjct: 62 ---EHEIVDLSNVASMLPGYSLTDSQVDVPDQHYTAPGSVNVVPNRNVILLSVAYGKAAA 118
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES----HVTVHTPLMWLKKYETW 181
+ + IG D S PDC + I + + H+ V P + L K++
Sbjct: 119 VKADQVAIGALAGDASTAPDCSAEFISSFNAMEKIACAGYAPAHLEVVAPFIDLHKHDVI 178
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+L + +G + E+ +C+ G C +C AC R + + +
Sbjct: 179 RLGEKLG------VDWTETWSCFKGTE-------VHCGTCAACVDRIQAFERAET 220
>gi|282163370|ref|YP_003355755.1| archaeosine biosynthesis protein QueC [Methanocella paludicola
SANAE]
gi|282155684|dbj|BAI60772.1| archaeosine biosynthesis protein QueC [Methanocella paludicola
SANAE]
Length = 228
Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 17/229 (7%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKD 69
+++L S G DS+ ALD F L+FDYGQR +E+E + ++ +
Sbjct: 4 SIVLLSSGLDSAVAFKMALDAFGVDLALTFDYGQRAADMEIESAKMICERFGVRHEVIEA 63
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRL 126
ED L + S + ++ +I+ +VP RN F+ AA A L
Sbjct: 64 PWLEDVTLTALVNRGESVPTPSETELDEIKGKARETAHAVWVPNRNGAFINIAACFADAL 123
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ +IV G + + +PD + AI ++ E+H V P++ + K E K
Sbjct: 124 KVDHIVCGFNAEEGATFPDNTPAFVEAINKSLYYSTENHAKVIAPVIDMDKVEIIKKGMS 183
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
I + L+ S +CY+ C C +C R + +
Sbjct: 184 I------DAPLDLSWSCYVSGEKP-------CGKCESCVRRARAFKRAG 219
>gi|239986244|ref|ZP_04706908.1| succinoglycan biosynthesis regulator [Streptomyces roseosporus NRRL
11379]
Length = 223
Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 87/235 (37%), Gaps = 31/235 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + SGG DS V LS DYGQR++ E + +I
Sbjct: 3 RVIAIVSGGLDSVVLAHHLHAEGHEVHLLSIDYGQRHRKEHDYARIAADRIGA------- 55
Query: 70 SLGEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYR 125
E I+ L+ + + +S V + Q P + VP RN+I L A A
Sbjct: 56 ---EHEIVDLSNVASMLPGYSLTDSQVDVPDQHYTAPGSVNVVPNRNVILLSVAYGKAAA 112
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES----HVTVHTPLMWLKKYETW 181
+ + IG D S PDC + I + + H+ V P + L K++
Sbjct: 113 VKADQVAIGALAGDASTAPDCSAEFISSFNAMEKIACAGYAPAHLEVVAPFIDLHKHDVI 172
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+L + +G + E+ +C+ G C +C AC R + + +
Sbjct: 173 RLGEKLG------VDWTETWSCFKGTE-------VHCGTCAACVDRIQAFERAET 214
>gi|294496221|ref|YP_003542714.1| exsB protein [Methanohalophilus mahii DSM 5219]
gi|292667220|gb|ADE37069.1| exsB protein [Methanohalophilus mahii DSM 5219]
Length = 228
Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 91/235 (38%), Gaps = 24/235 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-------RNKVELECRLCVRKKIVE 62
A+ L S G DS L+ A ++D L+FDYGQ + ++ + +++
Sbjct: 4 KAVCLLSSGLDSLASLAIASAKYDVQIGLTFDYGQLAADAEIDHSRQICAHYGIPHRVIS 63
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L W + ++ G + + ++ + N +VP RN + AA+
Sbjct: 64 L--DWMKDITTTSLVNR--QGCLPDMAGADLGKREVTSESAANVWVPNRNGLMANIAASF 119
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A LG IV G + + +PD + + I A + + V + +P++ + K K
Sbjct: 120 AEALGCGYIVAGFNAEEAATFPDNSPEFVDCINRAFSYSTLNGVRLISPVLEMDKVAIVK 179
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
A L S +CY GK C C +C R + + + +
Sbjct: 180 EAVR------AQAPLGLSWSCYQGKEKP-------CGLCESCVRRARAFQKAGVQ 221
>gi|52549865|gb|AAU83714.1| transcriptional regulator [uncultured archaeon GZfos33E1]
Length = 231
Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 93/240 (38%), Gaps = 32/240 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+ + SGG DS+ + A + + YGQR + R+K V
Sbjct: 1 MTKIAVCVCSGGIDSTVTATIASEEGYELHLFHASYGQRAE--------AREKEVVAKLA 52
Query: 67 WKDSLGEDHILPLAILGDISHSSLTK--------NVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E L L ++ SSLT ++ P+T+VP RNII L
Sbjct: 53 SYLNANELKFAELPFLKELGGSSLTDLKRRIPTGEEVNLEEEKETPSTWVPCRNIILLAN 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV---TVHTPLMWL 175
A+ A + I +G + YPD + + + + S+ V PL+ L
Sbjct: 113 ASAFAEVISADAIFVGFNAEEARSYPDNEKEFVDRYNAVLEKAVASYCPPPEVKAPLVDL 172
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E K ++ L+ +++CYLG++ C C +C R++G+ +
Sbjct: 173 LKPEIIKKGVEVKA------PLQLTYSCYLGEKK-------HCGICESCQHRRRGFKDAG 219
>gi|118431467|ref|NP_147964.2| hypothetical protein APE_1470.1 [Aeropyrum pernix K1]
gi|150421640|sp|Q9YBY0|QUEC_AERPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|116062792|dbj|BAA80468.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 269
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 31/246 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ + SGG DS T L R V LSF+YGQ+ E+ + +K EL +
Sbjct: 4 CRAVSIVSGGPDSFTYTLIWLSRGCSVHALSFNYGQKASREVLTARKLLEKADELASERG 63
Query: 69 -DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
+ E ++ ++ + + + + ++++++ P+ VP RN++ L AA AY L
Sbjct: 64 WGRVLEHRLVDISFMKSLWRGTQLTDEEVEVKEDYAPSVVVPIRNVVMLSIAAAYAYSLL 123
Query: 127 ---GITNIV--IGVCETD--------YSGYPDCRHDTIRAIETAINLGMESHVT---VHT 170
+ +V G D YPDC + I A++ A L + V +
Sbjct: 124 EEEDVDRVVVTYGAQRGDIKPRPDTGEPLYPDCSPECIEALQAAFRLCHFRGMRRLEVWS 183
Query: 171 PLMW-LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
P L K + K A V ++ ++ +CYL + Y C C +C R +
Sbjct: 184 PSREGLSKSDLLKWA-----YGTVGKLIYDTWSCYLNGK-------YHCGRCESCINRHR 231
Query: 230 GWMEFK 235
+ +
Sbjct: 232 AFKDAG 237
>gi|110816207|sp|Q2IUE0|QUEC2_RHOP2 RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
Full=7-cyano-7-carbaguanine synthase 2; AltName:
Full=PreQ(0) synthase 2; AltName: Full=Queuosine
biosynthesis protein queC 2
Length = 210
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+L SGG DS+TCL A V +L DYGQR VE+ +K
Sbjct: 3 RKKVLVLHSGGMDSTTCLLQAKAEGHDVASLGIDYGQRLLVEMMFAEGQCEKYS------ 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++ + + + N +++ +++ F+PGRNI+FL A +G
Sbjct: 57 ----IPRHVINVNWQK--AERQIPLNRSVEEMAHSVSPAFLPGRNIVFLGLGHAHAAGIG 110
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ IG+ D+SGYPDC + T +N+G + PL+ + K E +LA +
Sbjct: 111 ADELQIGLNCVDFSGYPDCTTQFYDSYCTMLNIGNPGGPKLVAPLLKMSKPEIARLASTL 170
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
G Q ++ +CY R C C AC L + W E K
Sbjct: 171 GLQ------RNDTWSCYRP--QIREGSIVACGECDACKLHEFAWQELK 210
>gi|239939761|ref|ZP_04691698.1| succinoglycan biosynthesis regulator [Streptomyces roseosporus NRRL
15998]
Length = 220
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 87/233 (37%), Gaps = 31/233 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ + SGG DS V LS DYGQR++ E + +I
Sbjct: 2 IAIVSGGLDSVVLAHHLHAEGHEVHLLSIDYGQRHRKEHDYARIAADRIGA--------- 52
Query: 72 GEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYRLG 127
E I+ L+ + + +S V + Q P + VP RN+I L A A +
Sbjct: 53 -EHEIVDLSNVASMLPGYSLTDSQVDVPDQHYTAPGSVNVVPNRNVILLSVAYGKAAAVK 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES----HVTVHTPLMWLKKYETWKL 183
+ IG D S PDC + I + + H+ V P + L K++ +L
Sbjct: 112 ADQVAIGALAGDASTAPDCSAEFISSFNAMEKIACAGYAPAHLEVVAPFIDLHKHDVIRL 171
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ +G + E+ +C+ G C +C AC R + + +
Sbjct: 172 GEKLG------VDWTETWSCFKGTE-------VHCGTCAACVDRIQAFERAET 211
>gi|159041826|ref|YP_001541078.1| exsB protein [Caldivirga maquilingensis IC-167]
gi|157920661|gb|ABW02088.1| exsB protein [Caldivirga maquilingensis IC-167]
Length = 502
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 29/234 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K L++ SGG DS+T + + + V L F+YG + E + ++I E +
Sbjct: 250 SKPRRVLVVASGGLDSTTSATQLIKQGYDVTLLHFNYGHVAEGPEENAV---RRIAEFLN 306
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----PNTFVPGRNIIFLVFAA 120
+ + + HS L + + + + + +VP RN++F+ A
Sbjct: 307 VPLLE------VNMDFFKIVKHSPLLGDGEINRRREGITGAEFAHEWVPARNLVFIALAV 360
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKY 178
+A +G + GV + YPD + IR + + +G HV + P+ L K+
Sbjct: 361 AIAEAMGYDYVATGVNLEEAGAYPDNEMEFIRLLNQVMPYAVGPNKHVELLMPVGHLVKH 420
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
E KL +IG L + +CY C C C++R+ +
Sbjct: 421 EIVKLGLEIGA------PLHLTWSCYDKGPK-------HCGRCGPCFMRRLAFK 461
>gi|237751000|ref|ZP_04581480.1| queuosine biosynthesis protein queC [Helicobacter bilis ATCC 43879]
gi|229373445|gb|EEO23836.1| queuosine biosynthesis protein queC [Helicobacter bilis ATCC 43879]
Length = 213
Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 30/226 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKDS 70
L+LFSGG DS+T L W+ L F Y + K E++ + + K D
Sbjct: 3 LVLFSGGVDSTTALFWSKKE-CATHALIFKYPSLHNKREIDAAVQICK----------DE 51
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAATLAYR 125
+L ++ + S+L +N + I ++ + VP RN IFL AA LA
Sbjct: 52 NVSYTLLDMSSVFVGFRSALLQNSSESIPQDSYNLESMAKLVVPFRNGIFLSVAAGLAES 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG IV+ D+ YPDC I ++ +I G V + +P K E KL
Sbjct: 112 LGYKEIVLANHAGDHPLYPDCTQSFIDSMNESIMQGSGGAVKLCSPFCNWDKKEIVKLGL 171
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+G + ++++CY G CN+CP C + +
Sbjct: 172 SLG------VDYTKTYSCYRGGEK-------HCNTCPTCIESNESF 204
>gi|307595994|ref|YP_003902311.1| Queuosine synthesis [Vulcanisaeta distributa DSM 14429]
gi|307551195|gb|ADN51260.1| Queuosine synthesis [Vulcanisaeta distributa DSM 14429]
Length = 235
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 86/235 (36%), Gaps = 28/235 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+LL SGG DS+ L R V LS +Y R + E E EL
Sbjct: 1 MKKKAILLLSGGIDSAVALYLLKSRGYDVIALSINYPGRGERERESAR-------ELARL 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L E + L + ++ + N P+T +P RN I AA A
Sbjct: 54 TNTKLIE---VDLPFMREVDELWNNDDERPSHLRNAHPST-IPARNAIIYAVAAYYAEVF 109
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME----SHVTVHTPLMWLKKYETWK 182
GI IV G D +PD + R I A+ +G + V PL L K + +
Sbjct: 110 GIDTIVAGHNADDTKYFPDTSREFRRFISRALTIGTYIGRARGLRVIAPLSGLSKTDVVR 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
L +G + E + +C+ + C C C R++ + E K
Sbjct: 170 LGLKLG------VPFEYTWSCHN-------NYDVPCGQCSGCLARRRAFNELGVK 211
>gi|161527552|ref|YP_001581378.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
gi|160338853|gb|ABX11940.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
Length = 224
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 33/237 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGG DS C L + ++F YGQ+ +E+ KK+
Sbjct: 2 KKAVVVFSGGVDS-VCAVSFLKSKYELYGITFSYGQKANMEISATKSFAKKL-------- 52
Query: 69 DSLGEDHILPLAILGDI-SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L + I+ + + ++ S++ + KI + VP RN +FL A+ AY L
Sbjct: 53 -GLKQHKIIDIGFMKELYGDSNVLTSSKRKIPSKFEYSIVVPIRNAVFLSVASAWAYTLN 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--------MESHVTVHTPLMW-LKKY 178
+ +V G D YPDCR + +E+A N G + + + +P L K
Sbjct: 112 ASLVVYGAHTGD-KYYPDCRPAFAKKLESAFNQGEIDGINSKIRKKIKIWSPYREGLSKS 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ K + + G + + +CY K+ C C +C R+ + +
Sbjct: 171 DLLKKGKKVLGDSIFR-----TWSCYSNKK-------LHCGVCESCNNRKIAFEKAG 215
>gi|34419359|ref|NP_899372.1| exsB protein [Vibrio phage KVP40]
gi|34333040|gb|AAQ64195.1| exsB protein [Vibrio phage KVP40]
Length = 238
Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 31/228 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ + SGG DS+ +D F D V LSF YGQ+ +ELE +K+
Sbjct: 2 KVVSVLSGGLDSTILTYKLVDEFGKDNVFALSFYYGQKQSIELEKAKLTCQKLG------ 55
Query: 68 KDSLGEDHILPLAILGD--------ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E ++ ++ LG+ I+ S + + + P T VP RN++ A
Sbjct: 56 ----IEHRLIDISFLGEVVAPVCANIAGSDVAMPTIQDVLGDPQPPTEVPYRNMLLNTIA 111
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A G + + G+ D GY DC D + + L + +T+H P + K +
Sbjct: 112 FSFAQANGCSAVFTGIQVHDAYGYWDCTQDFLDGMNKISALNRQHEITLHAPFAQMSKAD 171
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ ++G + E+S TCY G C CP+C R
Sbjct: 172 EIAIGVELG------VPFEDSLTCYDPNE-----AGESCGKCPSCAER 208
>gi|323701739|ref|ZP_08113410.1| exsB protein [Desulfotomaculum nigrificans DSM 574]
gi|323533275|gb|EGB23143.1| exsB protein [Desulfotomaculum nigrificans DSM 574]
Length = 228
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 87/235 (37%), Gaps = 36/235 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWK 68
+++L SGG DS+ CL++ L L+F+YGQR E++ +
Sbjct: 2 KSIVLLSGGLDSAVCLAYGLTETKVELALTFNYGQRSATREIQAAAALANYYG------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA------------MKIQDNNLPNTFVPGRNIIFL 116
+ ++ L L +I+ +SL + +VP RN +F+
Sbjct: 55 ---VKHRVIDLPWLAEITTTSLVNEEENIPEPMGPELDYIPTAKATAAAVWVPNRNGLFV 111
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
AA A L +V G + + +PD + + A TA+ + V V + L
Sbjct: 112 NIAACFAETLNCQLVVAGFNREEAATFPDNTPEFVTAASTAMAYSTANQVKVVSFTNRLN 171
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
K E L +G + + +CY G C C +C + +
Sbjct: 172 KKEIVALGHRLG------VPWDLIWSCYHGGDKM-------CGRCESCQRMMRAF 213
>gi|297621549|ref|YP_003709686.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
86-1044]
gi|297376850|gb|ADI38680.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
86-1044]
Length = 228
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 25/235 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ AL++ SGG DSS CL A+DR D+V ++SF YGQR+ EL + +
Sbjct: 2 RCKQALVVHSGGMDSSLCLKLAIDRHGADQVLSISFRYGQRHSNELVQAAKICR------ 55
Query: 65 PKWKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
D + ++ L L +I+ ++ + +A++ PNT V GRN + AA A
Sbjct: 56 ----DWGVDHCVIQLDCLQEITDNALMNTEIAIEHSQGRPPNTLVLGRNGLMARLAAIHA 111
Query: 124 YRLGITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYET 180
LG I +GV E + SGY DC D + +E + + +++ + TP++ + K +T
Sbjct: 112 NHLGAEKIYMGVIEVEGANSGYRDCSRDYMDLMEKILRIDLDNPRFEIVTPIVQMTKCQT 171
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
LA +G +++ +L+E+ TCY G G GC CPAC LR +G +K
Sbjct: 172 MALADQLG---VLDYLLKETITCYEGI------GGRGCQHCPACKLRNEGADRYK 217
>gi|78044764|ref|YP_359799.1| exsB protein [Carboxydothermus hydrogenoformans Z-2901]
gi|110816220|sp|Q3ADI5|QUEC_CARHZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|77996879|gb|ABB15778.1| exsB protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 215
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L S G DS+ L++ + F V L+F+YGQ+ + KKI++ +
Sbjct: 2 EKAIVLLSAGLDSTVSLAYGVRNFQVVLGLTFNYGQKASR---KEIEHSKKILDYYGIPQ 58
Query: 69 DSLGEDHILPLAILGDISHSS-LTKNVAMKIQ---------DNNLPNTFVPGRNIIFLVF 118
+ ++ L L I+ +S + ++ + ++ +VP RN +F+
Sbjct: 59 E------VIELPFLKKITKTSLVAEDQEIPTGIDLESAAAVKTSMEKVWVPNRNGLFINI 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA A LG I+ G + + D + + A+ A+ +HV V + L+K
Sbjct: 113 AAAYAESLGAKYIITGFNAEEAKTFSDNSREFVDAVNHALKYSTLNHVQVVSFTQNLEKS 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL--RQKG 230
E ++L ++G L+ +CY G + C C +C R +G
Sbjct: 173 EIYRLGVELGA------PLDLIWSCYYGGDEM-------CGVCESCLRLKRARG 213
>gi|254489139|ref|ZP_05102343.1| exsB protein [Roseobacter sp. GAI101]
gi|214042147|gb|EEB82786.1| exsB protein [Roseobacter sp. GAI101]
Length = 215
Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 82/211 (38%), Gaps = 29/211 (13%)
Query: 27 WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGD-I 85
+ +SFDYGQR++ EL+ ++ I+ L +G +
Sbjct: 1 MVAQEHELTRLVSFDYGQRHRKELDYAALCAARLE----------VPHDIIDLRAIGAAL 50
Query: 86 SHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSG 142
+ S+LT ++ + + ++ T VP RN I L A +A G + V D+
Sbjct: 51 TGSALTDDIDVPDGHYAEESMRITVVPNRNAIMLTVAFGVAAARGDQAVATAVHGGDHFI 110
Query: 143 YPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEES 200
YPDCR +A E +E V+++TP + K + + ++
Sbjct: 111 YPDCRPAFTQAFEAMQKAALEGYADVSLYTPFVNRTKADIVTEG------ARCDTPFAQT 164
Query: 201 HTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+CY G + C C C R++ +
Sbjct: 165 WSCYKGGT-------HHCGRCGTCVERREAF 188
>gi|327310688|ref|YP_004337585.1| exsB protein [Thermoproteus uzoniensis 768-20]
gi|326947167|gb|AEA12273.1| exsB protein [Thermoproteus uzoniensis 768-20]
Length = 496
Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 29/233 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ AL++ SGG DS+T + L + V L F+Y R+ E R VR E+
Sbjct: 250 RRRRALVVASGGLDSTTAAAALLRQGYEVALLHFNY--RHVAEDPERRAVR----EISKA 303
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKN-----VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L E + + S L V M + + +VP RN +F+ A
Sbjct: 304 LGTPLIE---VDMDFFKLAGRSPLLGEGEINRVDMGREGAEFAHEWVPARNFVFIALAVA 360
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYE 179
LA G + +G+ + YPD + +R + A+ V + P+ L K+E
Sbjct: 361 LAEAWGYDYVALGINMEEAGAYPDNEMELVRLLNQALPYATGPQRRVQLLMPVGGLVKHE 420
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+L ++G L + +CY C C CY+R+ +
Sbjct: 421 IVRLGLEVGA------PLHLTWSCYDKGPK-------HCGRCGPCYMRRLAFK 460
>gi|329766237|ref|ZP_08257795.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137296|gb|EGG41574.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 224
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 33/236 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGG DS C+ L + +SF YGQ+ E+ KK+
Sbjct: 2 KKAVIVFSGGIDS-VCMVSHLKSKYDLYGISFSYGQKANREINSAKAFAKKL-------- 52
Query: 69 DSLGEDHILPLAILGDI-SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L + I+ + + ++ S++ + KI + VP RN +FL A+ AY L
Sbjct: 53 -GLKQHKIINIGFMKELYGDSNVLTSSKRKIPSAFDYSIVVPIRNAVFLSIASAWAYTLN 111
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL--------GMESHVTVHTPLMW-LKKY 178
+ + G D YPDCR + +E+A NL G+ ++ + +P + K
Sbjct: 112 ASLVAYGAHTGD-KHYPDCRPIFTKKLESAFNLGEIDGINSGLRKNIQIWSPYREGISKS 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ K+ + ++ + ++ +CY K+ + C C +C R+ + +
Sbjct: 171 DLLKIGFKM-----LDDSIFKTWSCYSNKK-------FHCGVCESCNNRKTAFQKA 214
>gi|325967840|ref|YP_004244032.1| queuosine synthesis protein [Vulcanisaeta moutnovskia 768-28]
gi|323707043|gb|ADY00530.1| Queuosine synthesis [Vulcanisaeta moutnovskia 768-28]
Length = 235
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 87/235 (37%), Gaps = 28/235 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+LL SGG DS+ L R V +S +Y R + E E + K + +
Sbjct: 1 MKKRAILLLSGGIDSAVALYLLKSRNYDVVAISINYPGRGERERESARILAKLTNTRLIE 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + +I K + + P+T +P RN I AA A L
Sbjct: 61 ----------VDIPFMKEIVELWNNKEERPEHLRDAHPST-IPARNAIIYAVAAYYAEIL 109
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYETWK 182
GI IV G D +PD + I A+ +G + V PL L K E K
Sbjct: 110 GINIIVAGHNADDTKYFPDTSRMFRKIISRALTIGTHIGKTKGLRVIAPLSKLNKTEVVK 169
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
L +G + E + +C+ + C C C R++ + E K
Sbjct: 170 LGLKLG------VPFEYTWSCHN-------NYDKPCGQCSGCLARKRAFDELGVK 211
>gi|29566196|ref|NP_817764.1| gp3 [Mycobacterium phage Rosebush]
gi|29424921|gb|AAN01845.1| gp3 [Mycobacterium phage Rosebush]
Length = 235
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 67/230 (29%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L SGG DSST L+WALDR D+ L DYGQR+ VE V + +
Sbjct: 8 LVLLSGGMDSSTLLAWALDRPDVDQASALFVDYGQRHVVERASSQLVAQHYGAAWSE--- 64
Query: 70 SLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L L G +S+LT + ++N+ T VP RN + AA +A
Sbjct: 65 -------LDLRAFGASVNSALTVMAREVPHGHYAEDNMVQTVVPNRNATLISAAAGIAAS 117
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG ++ V D++ YPDCR + + AI+ A G V V P K + +L
Sbjct: 118 LGHDAVLTAVHVGDHAVYPDCRPEFVAAIDMATFAG--CGVHVVAPFQTGDKADIARLGG 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY G + C C C R + + E
Sbjct: 176 QLG------VPYHLTWSCYEGGLNDA----RHCGRCGTCVERAEAFAEAG 215
>gi|109521761|ref|YP_655683.1| gp3 [Mycobacterium phage Qyrzula]
gi|91980705|gb|ABE67423.1| gp3 [Mycobacterium phage Qyrzula]
Length = 235
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L SGG DSST L+WALDR DR L DYGQR+ VE V + +
Sbjct: 8 LVLLSGGMDSSTLLAWALDRPDVDRASALFVDYGQRHVVERTSSQLVAQHYGAAWSE--- 64
Query: 70 SLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L L G +S+LT + ++N+ T VP RN + AA +A
Sbjct: 65 -------LDLRAFGASVNSALTVMAREVPHGHYAEDNMVQTVVPNRNATLISAAAGIAAS 117
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG ++ V D++ YPDCR + + AI+ A G V V P K + +L
Sbjct: 118 LGHDAVLTAVHVGDHAVYPDCRPEFVAAIDMATFAG--CGVHVVAPFQTGDKADIARLGG 175
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+G + + +CY G + C C C R + + E
Sbjct: 176 QLG------VPYHLTWSCYEGGLNDA----RHCGRCGTCVERAEAFAEAG 215
>gi|282889960|ref|ZP_06298495.1| hypothetical protein pah_c008o049 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500153|gb|EFB42437.1| hypothetical protein pah_c008o049 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 231
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 25/239 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K A+++ SGG DSS CL+ A+ F + V +LSF Y QR+ ELE + +
Sbjct: 1 MKLQKKAVVIHSGGMDSSICLALAIRTFSVENVLSLSFIYDQRHSSELEQAKKICQSWN- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNV-AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ IL + L +I+ ++LT ++ + PNT V GRN + A
Sbjct: 60 ---------VDHIILSIPCLKEITTNALTDTSLPIQCGNGEAPNTLVVGRNGLMAQLGAI 110
Query: 122 LAYRLGITNIVIGV--CETDYSGYPDCRHDTIRAIET-AINLGMESHVTVHTPLMWLKKY 178
A+ LG I +G+ E ++SGY DC + +T + T+ TPL+ + K
Sbjct: 111 HAHELGAHCIYMGIIGVEGNHSGYRDCSRAYMDLKQTLLRLDLDDHLFTIETPLVDMSKK 170
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+T +LAQ++G ++ +L E+ TCY G GC CPAC LR +G +F +
Sbjct: 171 KTLELAQEMG---VLEFLLNETITCYEGLEK------LGCQKCPACILRNEGIRQFSAE 220
>gi|256045475|ref|ZP_05448360.1| exsB protein [Brucella melitensis bv. 1 str. Rev.1]
Length = 217
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 78/214 (36%), Gaps = 29/214 (13%)
Query: 24 CLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILG 83
+ LSFDYGQR+K EL+ K++ I+ + +G
Sbjct: 1 LAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLG----------VPHQIIDIRTIG 50
Query: 84 D-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETD 139
++ S+LT +V + + + T VP RN I L A +A + + V D
Sbjct: 51 ASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKADAVALAVHGGD 110
Query: 140 YSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197
+ YPDCR I A +T ++ V + P + K +
Sbjct: 111 HFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADG------AKYRTPF 164
Query: 198 EESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
E + +CY G C C C R++ +
Sbjct: 165 EATWSCYKGAD-------RHCGRCGTCVERREAF 191
>gi|1143535|emb|CAA90569.1| ExsB [Sinorhizobium meliloti]
gi|2808500|emb|CAA12530.1| ExsB protein [Sinorhizobium meliloti]
Length = 234
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 22/202 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++ SGG DS + + LSFDYGQR++ EL+ +++
Sbjct: 2 KTIVICSGGLDSVSLAHKVAAEQELSGLLSFDYGQRHRKELDFAAACARRLG-------- 53
Query: 70 SLGEDHILPLAILGD-ISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
I+ + +G ++ S+LT V + + + T VP RN I L A +A
Sbjct: 54 --VPHQIIDIREIGRRLTGSALTDEVDVPDGHYAEETMKATVVPNRNAIMLAIAFGVAAA 111
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKL 183
+ V D+ YPDCR I A + + ++ V ++ P + + K +
Sbjct: 112 RKADAVATAVHGGDHFIYPDCRPGFIDAFQAMQDHALDGYADVALYAPFVNVSKADIVAD 171
Query: 184 AQDIGGQDLVNLILEESHTCYL 205
+ E+ +CY
Sbjct: 172 G------ARHDTPFAETWSCYK 187
>gi|294338282|emb|CBJ94320.1| hypothetical phage protein [Campylobacter phage CPt10]
Length = 219
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 90/228 (39%), Gaps = 21/228 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L SGG DSS L DR +SF YG ++ + L KK+VE + K
Sbjct: 2 KDTVLSISGGLDSSALLFEYKDRIK--IAVSFKYGSNHQ---DRELAAAKKVVEEVNKLG 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E I+ L S+L + + N VP RN IFL A +A
Sbjct: 57 AEI-EHRIIDLTTAFSTFKSALLSGSKAVPEAGSTEVSNVIVPFRNGIFLSILAGIAESE 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G I I D + +PDCR+D I A+ AI LG E V V P + K +
Sbjct: 116 GCRFIAIANHSGDSNVFPDCRYDFIDAMFKAIGLGTEDKVQVFAPYTNITKTDLTIRGMA 175
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G + +++CY G CN CP C R K E
Sbjct: 176 NGLNP------DWTYSCYKGGNKP-------CNVCPTCVDRNKAVQEA 210
>gi|269215411|ref|ZP_06159265.1| ExsB protein [Slackia exigua ATCC 700122]
gi|269130898|gb|EEZ61973.1| ExsB protein [Slackia exigua ATCC 700122]
Length = 268
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 93/240 (38%), Gaps = 39/240 (16%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
AL+L SGG DS+TCL+ A++RF V T+SF YGQR++ EL+ V ++
Sbjct: 31 PTRALVLSSGGIDSTTCLALAVERFSTANVSTVSFFYGQRHRKELDAAQAVAERYG---- 86
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL---------PNTFVPGRNIIFL 116
++L +A + S ++L + PNT+VP RN + L
Sbjct: 87 ------VAHYVLDIASVLRYSDNALMAGSTQDVARGTYADQKDAAGRPNTYVPFRNGLML 140
Query: 117 VFAAT-----LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
AA + + YPDC A+ A+ +G +VT+ P
Sbjct: 141 SAAAALAASLYPDEACAVYLGAHADDAAGDAYPDCSPAFTDAMSDAMRIGTYGNVTLEAP 200
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ K + G + E + +CY G C +C C R +
Sbjct: 201 FVNDTKAGVVACGLERG------VPYELTWSCYEGGD-------VACGTCGTCLDRIAAF 247
>gi|265991899|ref|ZP_06104456.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
Rev.1]
gi|263002921|gb|EEZ15258.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
Rev.1]
Length = 213
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 78/209 (37%), Gaps = 29/209 (13%)
Query: 29 LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGD-ISH 87
+ LSFDYGQR+K EL+ K++ I+ + +G ++
Sbjct: 2 AAEHELTGLLSFDYGQRHKKELDFAQACAKRLG----------VPHQIIDIRTIGASLTG 51
Query: 88 SSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYP 144
S+LT +V + + + T VP RN I L A +A + + V D+ YP
Sbjct: 52 SALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKADAVALAVHGGDHFIYP 111
Query: 145 DCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHT 202
DCR I A +T ++ V + P + K + E + +
Sbjct: 112 DCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADG------AKYRTPFEATWS 165
Query: 203 CYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
CY G C C C R++ +
Sbjct: 166 CYKGAD-------RHCGRCGTCVERREAF 187
>gi|297617393|ref|YP_003702552.1| exsB protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145230|gb|ADI01987.1| exsB protein [Syntrophothermus lipocalidus DSM 12680]
Length = 217
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 28/222 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
A+ L SGG DS+ C AL + + L+ DYGQ+ + E+E +
Sbjct: 3 KAITLLSGGLDSTLCTVLALRDMEVILALTVDYGQKARTREVESAGRIA----------- 51
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
H + A S LT+ +VP RN +F+ AA A +G
Sbjct: 52 AFYNIPHRVVEAGFLRTFASGLTRAERSTRSSRE---VWVPNRNGLFINIAACYAEEMGA 108
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+++G + +PD D + A+ +++ + V V + M + K E + A +G
Sbjct: 109 EAVLVGFNREEAVDFPDNSPDFVSAVNRSLSYSTRNQVRVISYTMEMDKTEMLREAIRLG 168
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ L + +CY C C +C L K
Sbjct: 169 ------IPLHYTWSCYEDGPSP-------CGVCASCRLLAKA 197
>gi|171463094|ref|YP_001797207.1| exsB protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171192632|gb|ACB43593.1| exsB protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 208
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 82/199 (41%), Gaps = 25/199 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SA S DS+T L+ A D LS YGQR+ EL + K+I
Sbjct: 15 SAQACLS--IDSTTVLALAKDSDYTPYALSVGYGQRHSSELAAAKHIAKQI--------- 63
Query: 70 SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ L L S+LT +D+ +P T+VP RN I L A
Sbjct: 64 GVARHEVVNLD-LTRFGGSALTDTKIAVPTSPGKDHEIPVTYVPARNTILLSLALGWTES 122
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM---------ESHVTVHTPLMWLK 176
LG +I G DYSGYPDCR + + + E NL ++ VH P++ L
Sbjct: 123 LGGLDIFYGANSVDYSGYPDCRPECVASFEHMANLATKAGVEAINNKNRFRVHAPIVSLT 182
Query: 177 KYETWKLAQDIGGQDLVNL 195
K + +L +G +
Sbjct: 183 KAQIIQLGSTMGVDYSQTV 201
>gi|42523689|ref|NP_969069.1| succinoglycan biosynthesis regulator [Bdellovibrio bacteriovorus
HD100]
gi|81617090|sp|Q6MKZ5|QUEC_BDEBA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|39575896|emb|CAE80062.1| succinoglycan biosynthesis regulator [Bdellovibrio bacteriovorus
HD100]
Length = 231
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 92/244 (37%), Gaps = 37/244 (15%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRN-KVELECRLCVRKKIVE 62
+KK ++L S G DS+ A+ V L+F+YGQR K ELE + K +
Sbjct: 1 MKKNKKVVVLLSAGLDSTVNAYEAIKHHHEIVLALTFNYGQRAAKKELEASANIAKHLG- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHS-------SLTKNVAMKI-----QDNNLPNTFVPG 110
++ L D + S ++ A++I + + +VP
Sbjct: 60 ---------IPHKVVELPWFKDFNKSSLLVEDQAVPTGSAVEIDNQQKSEETAKSVWVPN 110
Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
RN IFL AA A LG ++ G + + +PD + + ++ +HVTV
Sbjct: 111 RNGIFLNIAAAYAEALGADAVIPGFNAEEAATFPDNSREFLEQATKSLWYSTSNHVTVGC 170
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
LKK + +L Q + + E CY C C +C ++
Sbjct: 171 YTAHLKKPDIVRLGQGL------KVPWELIWPCYFSGDKW-------CGQCESCLRSKRA 217
Query: 231 WMEF 234
+
Sbjct: 218 FASA 221
>gi|294338085|emb|CBJ93923.1| hypothetical phage protein [Campylobacter phage CP220]
Length = 219
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 90/228 (39%), Gaps = 21/228 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L SGG DSS L DR +SF YG ++ + L KK+VE + K
Sbjct: 2 KDTVLSLSGGLDSSALLFEYKDRIK--IAVSFKYGSNHQ---DKELAAAKKVVEEVNKLG 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E I+ L S+L + + N VP RN IFL A +A
Sbjct: 57 AEI-EHRIIDLTTAFSTFKSALLSGSKAVPEAGSTEVSNVIVPFRNGIFLSILAGIAESE 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G I I D + +PDCR+D I A+ AI LG E V V P + K +
Sbjct: 116 GCRFIAIANHSGDSNVFPDCRYDFIDAMFKAIGLGTEDKVQVFAPYTNITKTDLTIRGMT 175
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
G + +++CY G CN CP C R K E
Sbjct: 176 NGLNP------DWAYSCYKGGNKP-------CNVCPTCVDRNKAVQEA 210
>gi|171185720|ref|YP_001794639.1| ExsB family protein [Thermoproteus neutrophilus V24Sta]
gi|170934932|gb|ACB40193.1| ExsB family protein [Thermoproteus neutrophilus V24Sta]
Length = 275
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 30/253 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ ++K A+ + SGG DS+ S L R V LSF YGQ+ VE+E + +KI
Sbjct: 3 VRPAVEKPCRAVAVVSGGPDSTCYASLWLRRGCDVHALSFLYGQKAAVEVEKAQVLLRKI 62
Query: 61 VELMPKWK-DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
EL + E ++ L+ LG + + + A+ ++ P VP RN++ A
Sbjct: 63 DELAAARGWGRVVEHRVVDLSALGSLWRGTQLTDAALAVEKEYTPTVVVPIRNVVMAAVA 122
Query: 120 ATLAYRL----GIT-NIVIGVCETD--------YSGYPDCRHDTIRAIETAINLG---ME 163
AY + G +V G D YPDC + + A++TA + E
Sbjct: 123 TAYAYTIRSATGAKTYVVYGAHYDDVKPRKDTWEPLYPDCSPECVEALQTAFRICHFRAE 182
Query: 164 SHVTVHTPLMW-LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCP 222
V + TP LKK + K+ + ++ +LI E + +CY C C
Sbjct: 183 RDVEIWTPSREGLKKSQLLKMCHE----EIGDLIYE-TWSCYKSGEA-------HCGECE 230
Query: 223 ACYLRQKGWMEFK 235
+C R +ME
Sbjct: 231 SCRNRHAAFMEAG 243
>gi|325919879|ref|ZP_08181869.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
gi|325549663|gb|EGD20527.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
Length = 196
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 101 NNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
+ +P T+VP RN I L A A +G ++ GV DYSGYPDCR + +RA E NL
Sbjct: 57 DGIPVTYVPARNTIMLSLALGWAEVIGANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANL 116
Query: 161 GMESHV-----TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWG 215
++ V VH PL +L K + + +G + + +CY D G
Sbjct: 117 ATKAGVEGAGLRVHAPLQFLSKADIVREGVRLG------VDFGLTVSCYRADAD-----G 165
Query: 216 YGCNSCPACYLRQKGWMEFK 235
C C AC LR G+ +
Sbjct: 166 RACGHCDACRLRAAGFTDAG 185
>gi|18313078|ref|NP_559745.1| hypothetical protein PAE2074 [Pyrobaculum aerophilum str. IM2]
gi|74563624|sp|Q8ZVX7|QUEC_PYRAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|18160584|gb|AAL63927.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 269
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 30/250 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I++K + + SGG DS+ + L R V LSF YGQ+ VE+E + +++ +
Sbjct: 2 IVEKPCRVVAVVSGGPDSTCYTALWLKRGCDVHALSFLYGQKAVVEVERAQLLLRRLDGI 61
Query: 64 MPKWK-DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + E ++ L+ LG++ + + ++ ++ + P VP RN++ A
Sbjct: 62 AAERGWGRVVEHRVVDLSSLGELWRGTQLTDPSVSVEQSYTPTVVVPIRNVVMAAVATAY 121
Query: 123 AYRLGITN-----IVIGVCETD--------YSGYPDCRHDTIRAIETAINLGM---ESHV 166
AY +G +++G D YPDC + + A++TA + E V
Sbjct: 122 AYTVGRNAGAKTYVILGSHYDDIKPREDTWEPLYPDCSPECVEAMQTAFRICHFRGERGV 181
Query: 167 TVHTPLMW-LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
+ TP L+K + K+ V ++ ++ +CY C SC +C
Sbjct: 182 EIWTPSREGLRKSQLLKMCHQ-----EVGDLIYDTWSCYKSGEA-------HCGSCESCK 229
Query: 226 LRQKGWMEFK 235
R ++E
Sbjct: 230 NRHAAFIEAG 239
>gi|257460681|ref|ZP_05625782.1| queuosine biosynthesis protein QueC [Campylobacter gracilis RM3268]
gi|257442012|gb|EEV17154.1| queuosine biosynthesis protein QueC [Campylobacter gracilis RM3268]
Length = 391
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 86 SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPD 145
S S + + ++LP+T+VP RN +FL AA LA + I IGV + D SGYPD
Sbjct: 242 SQSDKISPSSGESAFSDLPSTYVPFRNGVFLSIAAALAEKERCDAIFIGVVQEDSSGYPD 301
Query: 146 CRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTC 203
C I A E A+ LG + TPL+ L K + LA +IG + LE + +C
Sbjct: 302 CGASFIAAFERALELGTSRDFHPRIKTPLVHLSKAQIVSLALEIG------VPLELTWSC 355
Query: 204 YLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
Y + C C +C LR KG+ K
Sbjct: 356 YEREDA-------ACGLCDSCLLRLKGFAGAGAK 382
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 10/86 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
AL + SGG DS+TC A + L FDY QR E EC + +
Sbjct: 2 RALCVISGGMDSATCAYIARREGYEIVALHFDYDQRTMGKERECFGKICDDL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKNV 94
+ + IL + I S+LT
Sbjct: 54 -GVAKRLILDARFIAQIGGSALTDGT 78
>gi|167043380|gb|ABZ08083.1| putative ExsB [uncultured marine crenarchaeote HF4000_ANIW141O9]
Length = 233
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 93/241 (38%), Gaps = 33/241 (13%)
Query: 7 KAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A+++FSGG DS TC L + + +SF YGQ+ E++ K +
Sbjct: 9 EMKKAVVVFSGGIDSVSTCTY--LKQKYELYGISFLYGQKANQEIKKAKSFAKIL----- 61
Query: 66 KWKDSLGEDHILPLAILGDI-SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
L E ++ + + + ++ + KI + VP RN IFL A A+
Sbjct: 62 ----GLKEHKVVDINFMKKLYGDTNALTSSKKKIPSKFNYSVVVPIRNGIFLSIATAWAF 117
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL--------GMESHVTVHTPLMWLK 176
+ + + G D YPDCR + IE A N G+ + + +P
Sbjct: 118 SINASLVAYGAHMGD-KNYPDCRPAFSKKIEFAFNQGEIDGIKSGIRKRIQIWSPYKAKL 176
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K G D + + + +CY + + C C +C R+ ++E
Sbjct: 177 ----SKKQLLKKGYDTLGDKIFNTWSCYKNGKVQ-------CGKCESCNNRKAVFLEAGI 225
Query: 237 K 237
+
Sbjct: 226 E 226
>gi|317051375|ref|YP_004112491.1| exsB protein [Desulfurispirillum indicum S5]
gi|316946459|gb|ADU65935.1| exsB protein [Desulfurispirillum indicum S5]
Length = 216
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 33/239 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIVELMP 65
PSA+ L SGG DS+ L L V L+ YGQ ++K +
Sbjct: 1 MKPSAVALLSGGMDSTCALLKYLHDGGVVRHALTMAYGQ----------LAQEKEIAAAA 50
Query: 66 KWKDSLGEDH-ILPLAILGDISHSSLTKNV--------AMKIQDNNLPNTFVPGRNIIFL 116
D LG H + L L +S+SSL + + + + + +VP RN +F+
Sbjct: 51 AICDHLGIPHETVELPFLARLSNSSLNRGTIPENIDINDTRQSEQSARSVWVPNRNGLFI 110
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
AA A +G +I+ G + +PD D + A A++ + V + + +
Sbjct: 111 NIAAVFAESMGCQHIITGFNVEEAQTFPDNSRDFLMAANGALHFSTLDTLFVVSGTIDMD 170
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K E G +E +CY G+ C +C +C ++ E +
Sbjct: 171 KKEIA------GYLMRNAFPMELIWSCYKGEE-------VPCGTCESCLRMKRAIEEAQ 216
>gi|119873340|ref|YP_931347.1| ExsB family protein [Pyrobaculum islandicum DSM 4184]
gi|119674748|gb|ABL89004.1| ExsB family protein [Pyrobaculum islandicum DSM 4184]
Length = 276
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 30/248 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ A+ + SGG DS+ L R + LSF YGQ+ VE+E V +KI EL
Sbjct: 8 ERPCRAVAVVSGGPDSTCYAVLWLKRGCDIHALSFLYGQKASVEVEKAQLVLRKIDELAA 67
Query: 66 KWK-DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ E ++ L+ LG++ + + ++ ++ P VP RN++ A AY
Sbjct: 68 ARGWGRVVEHRVVNLSALGELWRGTQLTDSSLSVEREYTPTVVVPIRNVVMAAVATAYAY 127
Query: 125 RL----GIT-NIVIGVCETDYSG--------YPDCRHDTIRAIETAINLG---MESHVTV 168
+ G ++ G D YPDC + I A++TA + E V +
Sbjct: 128 TIRNFTGAKTYVIYGAHYDDIKPREDTWEPRYPDCSPECIEALQTAFRICHFRAERDVEI 187
Query: 169 HTPLMW-LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
TP LKK + K+ V ++ E+ +CY C C +C R
Sbjct: 188 WTPSREGLKKSQLLKICHQ-----EVGDLIYETWSCYKSGEA-------HCGECESCRNR 235
Query: 228 QKGWMEFK 235
++E
Sbjct: 236 HAAFIEAG 243
>gi|147921307|ref|YP_684879.1| succinoglycan biosynthesis regulator [uncultured methanogenic
archaeon RC-I]
gi|110620275|emb|CAJ35553.1| succinoglycan biosynthesis regulator [uncultured methanogenic
archaeon RC-I]
Length = 222
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 41/237 (17%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMPKWKDSL 71
S G DS D ++FDYGQR ++E+ ++C R +
Sbjct: 2 LSSGLDSVVAFKKEHDEHGVALAITFDYGQRAASKEIEMARQICARYHVR---------- 51
Query: 72 GEDHILPLAILGDISHSSLTK-----NVAMKIQDNNLPN--------TFVPGRNIIFLVF 118
++ L L I+ ++L + + + + +VP RN F+
Sbjct: 52 --HEVIELPWLKQITRTALVSRQAEVPEPTEAELDEIKGRALETAHLVWVPNRNGAFINI 109
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA G IV G + + +PD + A+ ++ L E V V P++ K
Sbjct: 110 AAAFGDAYGYNRIVCGFNAEEGATFPDNTPAYVDAVNKSLALSCEKQVQVVAPVIHFDKE 169
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + I L+ S +CY C C +C R + +
Sbjct: 170 EIIREGVRIEA------PLDLSWSCYFAGEKP-------CGKCESCMRRARAFKRAG 213
>gi|126458827|ref|YP_001055105.1| ExsB family protein [Pyrobaculum calidifontis JCM 11548]
gi|126248548|gb|ABO07639.1| ExsB family protein [Pyrobaculum calidifontis JCM 11548]
Length = 270
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 30/246 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A+ + SGG DS+ + + R V LSF YGQ+ VE+E V K++ EL K
Sbjct: 3 KCKAVAVVSGGPDSTCYTALWMKRGCDVHALSFLYGQKGAVEVEKAQAVLKRLDELAAKR 62
Query: 68 K-DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL---- 122
+ E ++ L+ LG++ + + + ++ P VP RN++ A
Sbjct: 63 GWGRVVEHKVVDLSSLGELWRGTQLTDAGVAVEREYAPTVVVPIRNVVMAAVATAYAYTL 122
Query: 123 -AYRLGITNIVIGVCETD--------YSGYPDCRHDTIRAIETAINLGM---ESHVTVHT 170
A +++G D YPDC + A++ A + E V + T
Sbjct: 123 RAVSGAKVYVILGSHYDDIRPREDTWEPLYPDCSPECFEALQAAFRICHFRGERDVELWT 182
Query: 171 PLMW-LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
P L+K + KL D V ++ E+ +CYL C C +C R +
Sbjct: 183 PSREGLRKSQLLKLC-----YDEVGNLVYETWSCYLSDEA-------HCGRCESCRNRHR 230
Query: 230 GWMEFK 235
++E
Sbjct: 231 AFLEAG 236
>gi|169831397|ref|YP_001717379.1| exsB protein [Candidatus Desulforudis audaxviator MP104C]
gi|254764331|sp|B1I3W2|QUEC_DESAP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|169638241|gb|ACA59747.1| exsB protein [Candidatus Desulforudis audaxviator MP104C]
Length = 220
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 85/232 (36%), Gaps = 33/232 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++L SGG DS+ CL++ + + L+ DYGQ L ++I
Sbjct: 2 KGIVLLSGGLDSAVCLAFGVRSLEVALCLTADYGQ---------LAAGREIAAAAALSAH 52
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDN-----------NLPNTFVPGRNIIFLVF 118
++ L L +I S+LT + + + +VP RN + +
Sbjct: 53 YGIRHQVVELPFLREIDCSALTGRLGLPEPEEMELDDPVRSAETARQVWVPNRNGLLVNV 112
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
AA A LG I+ G + +PD + A+ ++ S + V + L K
Sbjct: 113 AACYAEALGCERIIAGFNREEAQHFPDNSPQFLDAVNHSLAYSTLSGIRVISYTQQLDKA 172
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
E L Q +G L +CY G + C C +C ++
Sbjct: 173 EIVALGQRLG------LPWSLVWSCYRGGDE-------ACGVCESCRRLERA 211
>gi|134299609|ref|YP_001113105.1| exsB protein [Desulfotomaculum reducens MI-1]
gi|172044293|sp|A4J5C7|QUEC_DESRM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|134052309|gb|ABO50280.1| exsB protein [Desulfotomaculum reducens MI-1]
Length = 228
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 88/238 (36%), Gaps = 34/238 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++++L SGG DS+ L++A + L+ +Y QR + + +
Sbjct: 2 NSVVLLSGGLDSAVNLAFARTEGNVKLALTINYRQRAAHKEIAAAAQLARYYAI------ 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVA------------MKIQDNNLPNTFVPGRNIIFLV 117
++ L L +I+ ++L ++ + +++ +VP RN +F+
Sbjct: 56 ---PHRVIELPWLAEITKTALVRSESQLPEPKTEELDQLELAGKTAAEVWVPNRNGLFVN 112
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
AA A L +V G + + +PD + A A+ + V V + L K
Sbjct: 113 IAACFAETLHCEIVVAGFNCEEAATFPDNTPEFALAASAAMQYSTANQVKVLSYTGRLNK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ L Q + L E +CY G+ C C +C + +
Sbjct: 173 KDIVALGQRL------QLPWELIWSCYRGEA-------LMCGKCESCQRMIRAFHSLG 217
>gi|145592302|ref|YP_001154304.1| ExsB family protein [Pyrobaculum arsenaticum DSM 13514]
gi|145284070|gb|ABP51652.1| ExsB family protein [Pyrobaculum arsenaticum DSM 13514]
Length = 266
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 42/253 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP- 65
A+ + SGG DS+ + L R V +SF YGQ+ +E+E + +KI ++
Sbjct: 2 SRCRAVAVVSGGPDSTCYTTLWLKRGCDVHAISFLYGQKASIEVERAQALLRKIDQIAAE 61
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL--------- 116
K + E ++ L+ L ++ + + A+ ++++ P VP RN++
Sbjct: 62 KGWGRIVEHKVINLSQLAELWRGTQLTDAAVAVEESYTPTVVVPIRNVVMAAIATAYAYT 121
Query: 117 --VFAATLAYRLGITNIVIGVCETD--------YSGYPDCRHDTIRAIETAINLG---ME 163
A T Y +++G D YPDC + A++ A + E
Sbjct: 122 IRSAAGTKVY------VILGSHYDDIRPRDDTWEPRYPDCSPECFEALQAAFRICHFRAE 175
Query: 164 SHVTVHTPLMW-LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCP 222
V + TP L+K + + V ++ E+ +CY C +C
Sbjct: 176 RDVEIWTPSREGLRKSQLLRECYR-----EVGDLVYETWSCYKSGEA-------HCGACE 223
Query: 223 ACYLRQKGWMEFK 235
+C R ++E
Sbjct: 224 SCANRHAAFLEAG 236
>gi|20094501|ref|NP_614348.1| PP-loop superfamily ATPase [Methanopyrus kandleri AV19]
gi|74559880|sp|Q8TWG9|QUEC_METKA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=Archaeosine biosynthesis protein queC; AltName:
Full=PreQ(0) synthase
gi|19887606|gb|AAM02278.1| Predicted PP-loop superfamily ATPase [Methanopyrus kandleri AV19]
Length = 229
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 26/235 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWKD 69
++L SGG DSS WA++ RV L DYGQRN E + + +
Sbjct: 5 VVLCSGGLDSSVIAKWAVEELGGRVICLFVDYGQRNAPFERRAAERIAEAVGAEFETVGT 64
Query: 70 SLGEDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ G + + T++++ ++P RN L AA L L +
Sbjct: 65 FWLRRLCPDNPMFAGRLPREAGTEDLSAN---------WLPARNWNLLGVAAALCDHLYL 115
Query: 129 T------NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+IV G+ + +PD + A+ A+ G+ S +H+PL L K +
Sbjct: 116 EGEDDEFHIVWGINAEEAERFPDNTKEFADAVAEALKRGLPSRPRLHSPLAELYKPGIVR 175
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
L ++G +E S +CY + + C C ACY R++ + +
Sbjct: 176 LGSELGA------PMELSVSCYNPIWE--DDTPVHCGECEACYHRKRAFERAGIE 222
>gi|147677737|ref|YP_001211952.1| PP-loop superfamily ATPase [Pelotomaculum thermopropionicum SI]
gi|189038932|sp|A5D2E1|QUEC_PELTS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
gi|146273834|dbj|BAF59583.1| predicted PP-loop superfamily ATPase [Pelotomaculum
thermopropionicum SI]
Length = 221
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 86/230 (37%), Gaps = 35/230 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+++L SGG DS+ L+ +L + L+FDYGQ ++
Sbjct: 2 RSIVLLSGGLDSAVSLACSLQGGEVCLCLTFDYGQ---------KAAEREKKAAAALAAH 52
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKI------------QDNNLPNTFVPGRNIIFLV 117
++ L L +I+ ++L + ++ +VP RN +F+
Sbjct: 53 YKLRHRVIELPFLKEITSTALVSETSELPAAEEEELDENEASRSSAALVWVPNRNGVFIN 112
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
AA A +V G + + +PD + + A +++ + V V + L K
Sbjct: 113 IAAAFAEAYRCDLVVTGFNREEAASFPDNSPEFVVAANASLSYSTLNKVRVASYTQGLNK 172
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
E KL ++G + + +CY G C C +C LR
Sbjct: 173 TEIVKLGMNMG------VPFDLIWSCYGGAEKM-------CRRCESC-LR 208
>gi|330830835|ref|YP_004393787.1| 7-cyano-7-deazaguanine synthase 2 [Aeromonas veronii B565]
gi|328805971|gb|AEB51170.1| 7-cyano-7-deazaguanine synthase 2 [Aeromonas veronii B565]
Length = 131
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
+FL +A AY++G ++ GVCETD+SGYPDCR + ++A+ A+ LGM+ V TPLM
Sbjct: 1 MFLTLSAIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNLAVVLGMDRPVRFETPLM 60
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
WL K ETW LA G + + ++ TCY G + G GC CPAC LR KG E
Sbjct: 61 WLDKAETWALADHCGH---LETVRRQTLTCYNGIQ------GDGCGECPACILRAKGLEE 111
Query: 234 FKEK 237
+ +
Sbjct: 112 YMAQ 115
>gi|213419651|ref|ZP_03352717.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 159
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 13/140 (9%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
LL + ++TCL+ A ++D V ++FDYGQR++ E++ + K+
Sbjct: 29 LLYLVEVRTTTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA------- 81
Query: 72 GEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+L + +L +++ SSLT++ + + +PNTFVPGRNI+FL AA AY++
Sbjct: 82 --HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQVK 139
Query: 128 ITNIVIGVCETDYSGYPDCR 147
++ GVCETD+SGYPDCR
Sbjct: 140 AEAVITGVCETDFSGYPDCR 159
>gi|284929681|ref|YP_003422203.1| preQ(0) biosynthesis protein QueC [cyanobacterium UCYN-A]
gi|284810125|gb|ADB95822.1| preQ(0) biosynthesis protein QueC [cyanobacterium UCYN-A]
Length = 181
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 19/176 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A++L SGG DS+T + A + ++ LS YGQ + ELE + K++
Sbjct: 7 AVVLLSGGLDSATSAAIAAAQGYKLVALSLRYGQLHHKELESAKTIAKEL---------D 57
Query: 71 LGEDHILPLAILGDISHSSLTKNV-AMK---IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ +I+ + + SSLT ++ + +N+P+T+VPGRN +F+ A +LA
Sbjct: 58 INSHYIIDVD-IAQWGGSSLTDESLSIPLDGVSPHNIPSTYVPGRNTVFIALALSLAEAK 116
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-----VTVHTPLMWLKK 177
G I +G+ DYSGYPDCR + ++A + N+ ++ + + PL+ K
Sbjct: 117 GAKAIFLGINMIDYSGYPDCRSEYLKAYQDLANISSKAGIEGNTIELIAPLIKKPK 172
>gi|118577065|ref|YP_876808.1| PP-loop superfamily ATPase [Cenarchaeum symbiosum A]
gi|118195586|gb|ABK78504.1| PP-loop superfamily ATPase [Cenarchaeum symbiosum A]
Length = 223
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 33/236 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++FSGG DS C+ L + R+ ++F YGQ R+
Sbjct: 2 KAVVVFSGGIDS-LCMCAHLRKKYRLYGITFLYGQ---------RARRESRAARRCAEIA 51
Query: 70 SLGEDHILPLAILGDI-SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L E + +GD+ S++ + +I + + VP RN +FL AA AY +G
Sbjct: 52 GLKEHRTAKMEFMGDLYGGSNVLTDSRRRIPASFEGSIVVPVRNAVFLSVAAAWAYSIGA 111
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINL--------GMESHVTVHTPLMW-LKKYE 179
+ G D + YPDCR + +E+A+NL G + + +P L K +
Sbjct: 112 ALVAYGAHTGDGN-YPDCRPAFAKRMESALNLGEADAINKGTRKALYIWSPYREGLSKAD 170
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K D G ++ +CY + C C +C R+ + +
Sbjct: 171 LLKTGHDAFGDEIFQA-----WSCYADGKK-------HCGKCESCSNRKAAFAKAG 214
>gi|307634707|gb|ADI83313.2| ExsB family protein [Geobacter sulfurreducens KN400]
Length = 194
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKDSLG 72
L SGG DS+ A + V L +YGQ+ + E E V + + +L
Sbjct: 6 LVSGGLDSTLVGVLAREDGLSVYPLFINYGQKAVQQEWEACQRVHQAL---------NLP 56
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ L+ G + S LT + M +++ F PGRN++FL+ + AY++G + +
Sbjct: 57 TPIKMDLSGFGKVICSGLTND-KMDVKEEA----FTPGRNLLFLLMGSAYAYQVGASAVA 111
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
IG+ +S +PD R + E AI + ++ + PL K + KL+ + G
Sbjct: 112 IGLLTEQFSLFPDQRTLFLEKAEQAIEAALGKNIKLLAPLSDFSKMDVVKLSIEKG---- 167
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
+ +++C+ G C C +C
Sbjct: 168 ----IAGTYSCHAGGDQP-------CGHCISCLE 190
>gi|302185402|ref|ZP_07262075.1| ExsB family protein [Pseudomonas syringae pv. syringae 642]
Length = 200
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 28/217 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
S + L SGG DS+ A + ++ L DYGQR + V K
Sbjct: 2 SIVTLVSGGLDSTLVAKLAQEEGLQIFPLFVDYGQRARDRELAACRVAMK--------TL 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L E I L G + S LT + ++ I D+ F PGRN++FL+ AA A++
Sbjct: 54 GLPEPEIASLGGFGKLIRSGLT-DTSLHIIDDA----FTPGRNMLFLLTAAAYAHQKNAD 108
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I IG+ S +PD + E I+L M + V PL K + LA + G
Sbjct: 109 AISIGLLHESTSLFPDQTSGFLAEAERMISLCMGRTIKVLAPLSVFTKPDVVALAAEKG- 167
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
+ +++C++G C +C +C
Sbjct: 168 -------ISGTYSCHIGDE-------VPCGNCISCNE 190
>gi|163784158|ref|ZP_02179097.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
gi|159880577|gb|EDP74142.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
Length = 166
Score = 144 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 76 ILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++ + L I S+LT ++ + + P T VP RN+ FL AA+ I NI
Sbjct: 1 MVDIPHLKGIEGSALTDEKVDIPSEDYPDQPPITTVPMRNLNFLSIAASFCDVYEIENIG 60
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKYETWKLAQD 186
IG+ D S YPDCR + + E IN ++ + V+TP + + K + KL +
Sbjct: 61 IGIHSVD-SPYPDCRAEFASSAEAVINASSVMVAKKKNRIKVYTPFLGMTKTDVLKLGLE 119
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + E++++CY G C C C RQ+ + K
Sbjct: 120 LG------VPYEKTYSCYRGTIPP-------CGECATCRQRQEAFESVGVK 157
>gi|89893414|ref|YP_516901.1| hypothetical protein DSY0668 [Desulfitobacterium hafniense Y51]
gi|110816201|sp|Q24ZT5|QUEC1_DESHY RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=PreQ(0) synthase 1; AltName: Full=Queuosine
biosynthesis protein queC 1
gi|89332862|dbj|BAE82457.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 220
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 28/226 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPK 66
+LLFSGG DS+ L W L R + L +YGQ+ + ELE + K +
Sbjct: 3 KNKVVLLFSGGIDSTVLLFWLLSRNYEIFPLFINYGQKSYEGELEAINKILKDLNTKNNL 62
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN--LPNTFVPGRNIIFLVFAATLAY 124
L + L + +L I +N + F P RN+I L AAT Y
Sbjct: 63 L--------TLNMPELQLVGSGALVGEYPKNISSHNEWYASEFFPNRNMILLSIAATYGY 114
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+L I+ I IGV Y D + A+E + + + + P + + + A
Sbjct: 115 KLQISKIAIGVVGDS---YQDTTRTFLEAMEMTLAQSIARY-ELIAPFAGHPRQKVIEEA 170
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ + L+ + +C C C +CY R+K
Sbjct: 171 YRL------QVPLKSTFSC-------NAMGNRHCLLCTSCYEREKA 203
>gi|222055806|ref|YP_002538168.1| ExsB family protein [Geobacter sp. FRC-32]
gi|221565095|gb|ACM21067.1| ExsB family protein [Geobacter sp. FRC-32]
Length = 196
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 32/219 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
S + L SGG DS+ A + L DYGQR + + R+ + EL
Sbjct: 2 SIVTLVSGGLDSTLIAKLAQEEGLIQHPLFVDYGQRARDQELAAC--RRGMSEL------ 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L E + L+ G + HS LT + ++D F PGRN++FL+ AA A ++
Sbjct: 54 GLPEPRVADLSGFGALIHSGLTDSSLDIVKDA-----FTPGRNMLFLLIAAAYAVQVKAD 108
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA--QDI 187
I IG+ S +PD +R E I M + + PL K + LA + I
Sbjct: 109 AISIGLLHESTSLFPDQTSAFLRDAEVLIRRCMNRDIKLLAPLASFLKTDVVALAKLKRI 168
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
G +++C+ G + C +C AC
Sbjct: 169 GA----------TYSCHTGNEET-------CGTCIACRE 190
>gi|205373220|ref|ZP_03226024.1| aluminum resistance protein [Bacillus coahuilensis m4-4]
Length = 108
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 47/101 (46%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 79 LAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
+++L ++ ++LT+ ++A+ ++ LP+TFVPGRN++FL FAA LA ++G +I+ GVCE
Sbjct: 1 MSLLNQLAPNALTRSDIAITHEEGELPSTFVPGRNLLFLSFAAVLAKQIGAKHIITGVCE 60
Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
TD+SGYPDCR I+++ +NL M+ +HTPLMWL K
Sbjct: 61 TDFSGYPDCRDVFIKSLNVTLNLSMDEQFVIHTPLMWLDKK 101
>gi|190893996|ref|YP_001984290.1| probable succinoglycan biosynthesis transcriptional regulator
protein [Rhizobium etli CIAT 652]
gi|190699657|gb|ACE93740.1| probable succinoglycan biosynthesis transcriptional regulator
protein [Rhizobium etli CIAT 652]
Length = 191
Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 29/213 (13%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DS+ A++ +V L +YGQR EL + L E
Sbjct: 1 MSGGLDSTLVAYLAIEEGLKVHPLFVNYGQRAIDRELAA--------CKNSMMKLGILDE 52
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
I L+ G + S LT ++D F PGRN++FL+ AA A+++ + I
Sbjct: 53 LEIADLSGYGRLIRSGLTDPNKHIVEDA-----FTPGRNMLFLLTAAAHAHQVNADAVSI 107
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
G+ + S +PD ++ E I M + V PL K E +LA+ G
Sbjct: 108 GLLHEETSLFPDQTSGFLQDAEALITRIMGRSIKVLAPLAAFHKDEVIQLAKAKGVGG-- 165
Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
+++C+LG + C C AC
Sbjct: 166 ------TYSCHLGLEEP-------CGECIACNE 185
>gi|77465652|ref|YP_355155.1| putative ExsB [Rhodobacter sphaeroides 2.4.1]
gi|77390070|gb|ABA81254.1| putative ExsB [Rhodobacter sphaeroides 2.4.1]
Length = 207
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 24/223 (10%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
ALL+ SGG DS+T W +R + + FDYGQ + VE E + E++P
Sbjct: 4 ALLMASGGLDSTTVAYWLTERGVQFIPVFFDYGQ-HCVETEWET-----LKEVLPASAAH 57
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ I L + +++D +L +VP R ++F AA A LG
Sbjct: 58 PERNDISDLFRGSKSRLITEADLWNEEVKDEDL---YVPYRTLLFYSAAAARAQTLGAFE 114
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+ G ++ + DC + + ++ + V +P + K E K + +G
Sbjct: 115 VYTGFINSNRAKEIDCTAEFMNKLDALTD--SVGPVRFLSPFRFWSKSEVAKESIRLG-- 170
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ + + +C + C +CP C R E
Sbjct: 171 ----VPIGRTFSC-------QAASLMPCGACPNCVERLAALRE 202
>gi|91976078|ref|YP_568737.1| ExsB [Rhodopseudomonas palustris BisB5]
gi|91682534|gb|ABE38836.1| ExsB [Rhodopseudomonas palustris BisB5]
Length = 206
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 89/227 (39%), Gaps = 22/227 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SALLL SGG DS+T W +++ + L FDYGQ + VE E + +
Sbjct: 2 SALLLCSGGLDSTTVGYWLVEKNISFQPLFFDYGQ-HCVEKEWETLQEVLPISGLVSPLL 60
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ I + I + ++D++L ++P R ++F A +A G+
Sbjct: 61 RINISEIFQHSPSRLI---AEPNLWTEHVEDDDL---YIPYRTLMFFSVGACIAQTRGLD 114
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G ++++ DC + +++ V P K + + A ++
Sbjct: 115 AVYAGFINSNHAKELDCSAAFLNNLDSLSR--SLGPVRFELPFRDWSKADVVRRANEL-- 170
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ + ++++C + C +CP C R F+E
Sbjct: 171 ----RVPVGKTYSC-------QLFSDTPCGACPNCVERISAIESFRE 206
>gi|220936088|ref|YP_002514987.1| ExsB family protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219997398|gb|ACL74000.1| ExsB family protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 213
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 34/225 (15%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+LLL SGG +S+T L+ + V L DYGQR + + + L P
Sbjct: 12 SLLLLSGGIESATLLALESRQ-RPVTPLVVDYGQRGALRERDAARAQCESHGLTPVE--- 67
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
L L+ G L K P+ +P RN++ L A + A R GI
Sbjct: 68 ------LDLSATGGTFRDGLLKR----------PHVPLPHRNLVILSLAVSYAARGGIDR 111
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+V+ + D + YP + A+ ++ + + TPL+ K +L +G
Sbjct: 112 VVLALNRDDLAAYPSASPGFLEHF-RALIHDLQPGLEITTPLIDRDKAGVIRLGVSLG-- 168
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +C LG C +CP C R+ +
Sbjct: 169 ----VDFARTWSCLLGYET-------HCGACPQCLHRRAAFRAAG 202
>gi|315427301|dbj|BAJ48912.1| transcription regulator ExsB related protein [Candidatus
Caldiarchaeum subterraneum]
gi|315428195|dbj|BAJ49779.1| transcription regulator ExsB related protein [Candidatus
Caldiarchaeum subterraneum]
Length = 216
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 82/224 (36%), Gaps = 23/224 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SGG DS+ L + L+ +RN E+E + K
Sbjct: 2 KIVALVSGGIDSTVMLWKLRSEGHSILPLTLLTFRRNPREIEAAKKISK---------AA 52
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
S E + ++ L ++ + Q +LPN +P RNIIF AA +A
Sbjct: 53 SGREPIVYDVSFLRELYDYPQHIKERVFQQFPSLPNIVIPYRNIIFYSVAAYVACHEAAE 112
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKLAQDIG 188
I G D PD + +E +N V + TP+ L K E +L ++G
Sbjct: 113 AIAGGHTREDMERIPDVGEEFFADLEKILNKSTPFHRVKILTPVAGLWKPEIMRLGVELG 172
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ E+ +C + C CP C R++ +
Sbjct: 173 A------PIGETWSC-------WSVFEKHCGKCPGCLSRKEVFR 203
>gi|221200023|ref|ZP_03573066.1| ExsB [Burkholderia multivorans CGD2M]
gi|221206823|ref|ZP_03579835.1| ExsB [Burkholderia multivorans CGD2]
gi|221173478|gb|EEE05913.1| ExsB [Burkholderia multivorans CGD2]
gi|221180262|gb|EEE12666.1| ExsB [Burkholderia multivorans CGD2M]
Length = 206
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
ALLL SGG DS+T V + FDYGQ + VE+E ++ E++P
Sbjct: 2 KRALLLASGGLDSTTVGYQLATTGVEVVPIFFDYGQ-HCVEIEWS-----RVNEVLPADM 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
L ++ + S S L + + ++QD++L ++P R ++F AA A
Sbjct: 56 QR---PERLVISDIFRGSQSRLIREADLWTEEVQDDDL---YIPYRTMLFFAAAAARAQT 109
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+GI ++ G ++++ DC + ++ + V H+P + K + + A
Sbjct: 110 VGILDVYTGFINSNHAKEIDCTAAFMNNLDGLTSSI--GPVRFHSPFRYSSKADVARAAA 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
++G + + +++C + + C +CP C R E K
Sbjct: 168 ELG------VPIGRTYSC-------QASAQFPCGACPNCVERLNALKEAK 204
>gi|153006833|ref|YP_001381158.1| ExsB family protein [Anaeromyxobacter sp. Fw109-5]
gi|152030406|gb|ABS28174.1| ExsB family protein [Anaeromyxobacter sp. Fw109-5]
Length = 195
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 30/217 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
S + L SGG DS+ + L DYGQR++ EL V +
Sbjct: 2 SVVPLVSGGLDSAVMSILIREEGLEQHPLFIDYGQRSRSAELTACRRVFR---------A 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + L G + S LT D F+PGRN++FL+ AA AY+
Sbjct: 53 HQLPRPAVAKLPGYGRLIPSGLTDKSMRLFDDA-----FLPGRNLLFLLTAAAYAYKRSA 107
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ IG+ + Y+ +PD ++ E I+ M V P+M K + +LAQ+
Sbjct: 108 RAVAIGLLDERYALFPDQTRSFVQEAEHLISNCMGVPFVVLAPMMHFSKVDVLRLAQEYN 167
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
H+C+ G C +C AC
Sbjct: 168 VVGA--------HSCHAGTATP-------CGACVACR 189
>gi|167584746|ref|ZP_02377134.1| putative ExsB [Burkholderia ubonensis Bu]
Length = 206
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 92/230 (40%), Gaps = 30/230 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
ALLL SGG DS+T V + FDYGQ CV + +
Sbjct: 2 KRALLLASGGLDSTTVGYQLAATGVEVVPIFFDYGQH---------CVDVEWSRVNEVLP 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAM---KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + S S L + + +++D++L ++P R ++F AA A
Sbjct: 53 AGMRRPERFDVSDIFRGSQSRLIREADLWTEEVKDDDL---YIPYRTMLFFAAAAARAQT 109
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+GI ++ G ++++ DC + +++ + V H+P + K + + A
Sbjct: 110 VGILDVYTGFINSNHAKEIDCTAAFMNSLDGLTSSI--GPVRFHSPFRYSSKVDVVRAAA 167
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ G + + +++C + + C +CP C R E K
Sbjct: 168 EFG------VPIGRTYSC-------QVSAQFPCGACPNCVERLNALKEAK 204
>gi|315425945|dbj|BAJ47595.1| transcription regulator ExsB related protein [Candidatus
Caldiarchaeum subterraneum]
Length = 213
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 81/220 (36%), Gaps = 23/220 (10%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS+ L + L+ +RN E+E + K S E
Sbjct: 3 LVSGGIDSTVMLWKLRSEGHSIVPLTLLTFRRNPREIEAAKKISK---------AASGCE 53
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ ++ L ++ + Q +LPN +P RNIIF AA +A I
Sbjct: 54 PIVYDVSFLRELYDYPQHIKERVFQQFPSLPNIVIPYRNIIFYSVAAYVACHEAAEAIAG 113
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G D PD + +E +N V + TP+ L K E +L ++G
Sbjct: 114 GHTREDMERIPDVGEEFFADLEKILNKSTPFHRVKILTPVAGLWKPEIMRLGVELGA--- 170
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ E+ +C + C CP C R++ +
Sbjct: 171 ---PIGETWSC-------WSVFEKHCGKCPGCLSRKEVFR 200
>gi|168067145|ref|XP_001785485.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662892|gb|EDQ49692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 290
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 32/229 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
PS+++L SGG +S+ L + L +YGQR E KI +
Sbjct: 4 PSSVVLMSGGIESAVLLYNWRSSSALLHPLYINYGQRGAAMEERA---SDKICNNLGLEL 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ ++ +G+ ++Q +P RN++ L AA+ A ++G
Sbjct: 61 SR------IDMSAVGNKFR---------ELQHGAKSFVPLPHRNLVILGLAASYASQVGS 105
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ + +G+ + D Y + + + + +E VT+ PL K E +L + +G
Sbjct: 106 SKVALGLNKDDLGSYSSASQNFMDSFRSTAA-SLEPPVTLIAPLSHFTKAEVIRLGKRLG 164
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ ++++C C C C RQ + E+
Sbjct: 165 ------VPFADTYSC-------MVGRPVHCGRCHQCRSRQLAFASASEQ 200
>gi|256831345|ref|YP_003160072.1| ExsB family protein [Jonesia denitrificans DSM 20603]
gi|256684876|gb|ACV07769.1| ExsB family protein [Jonesia denitrificans DSM 20603]
Length = 241
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 25/238 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIV 61
+ K AL L SGG DS T L L + V L++++G+ +N+ + + ++
Sbjct: 1 MSKNKVAL-LLSGGPDSVTLLYDLLAQGHEVVALTYNFGEAEAQNERDAATAIAAELEVE 59
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ L E + LP ++ ++ + ++ P + I L+ A+
Sbjct: 60 HHFFDFSGPLKEFYHLPQPQFLRMAMMRSSEAGPVSKSED-----VQPFGSAIALLLTAS 114
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYE 179
A + I+++ V D S + D + + G + V HTP + +K++
Sbjct: 115 WAVKNDISSVFYAVHADD-SHFTDNHREYFDKLSDVTRECEGQDFAVEFHTPYLDTRKFD 173
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+G + + +C G C C C R + E+
Sbjct: 174 VINKGITLG------VPFGRTWSCAAGGST-------HCGQCAPCINRSGAFAVIGEQ 218
>gi|255318486|ref|ZP_05359719.1| ExsB family protein [Acinetobacter radioresistens SK82]
gi|262378716|ref|ZP_06071873.1| ExsB superfamily [Acinetobacter radioresistens SH164]
gi|255304478|gb|EET83662.1| ExsB family protein [Acinetobacter radioresistens SK82]
gi|262300001|gb|EEY87913.1| ExsB superfamily [Acinetobacter radioresistens SH164]
Length = 201
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 84/216 (38%), Gaps = 35/216 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++LL SGG DS+ W + L+ DYGQ K +
Sbjct: 2 KSVLLLSGGMDSTAIAWWKRPDY----ALTIDYGQ----------LAAKAEIAASQSICR 47
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLGI 128
L H + +I + ++A I+ + P + + P RN + + A I
Sbjct: 48 YLNIPHEILTVDCRNIG----SGDMAGTIESKHAPASDWWPYRNQLLITLAGMKMLPFNI 103
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ I+IG +TD +G+ D H+ I A+ + L E H+TV P + L E +L+
Sbjct: 104 SKILIGTVKTD-NGHTDGSHEFIDAMNQLMFL-QEGHITVEAPAINLSTKELIQLSNIPA 161
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
L SH+C+ + C +C C
Sbjct: 162 EL------LAWSHSCHKSE--------VTCGNCRGC 183
>gi|259416599|ref|ZP_05740519.1| ExsB [Silicibacter sp. TrichCH4B]
gi|259348038|gb|EEW59815.1| ExsB [Silicibacter sp. TrichCH4B]
Length = 207
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 81/224 (36%), Gaps = 24/224 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
LLL SGG DS+T L++ + + FDYGQ CV + L+
Sbjct: 2 KRVLLLASGGLDSTTVAYQLLEKGCLPKPIFFDYGQH---------CVETEWGRLLEVMP 52
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ ++ + S S L + + + + +VP R + F AA A +GI
Sbjct: 53 ARAEYPERIDISGVFAGSKSRLLNEADLWSESISDDDLYVPYRTLFFFSAAAARAQSIGI 112
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ + G ++++ DC D + ++ V +P K + A +
Sbjct: 113 SEVYTGFINSNHAKEIDCSADFLNGLDALTE--NVGPVRFFSPFRHSSKADVALEALRL- 169
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
++ + + +C + C +CP C R
Sbjct: 170 -----DVPIGRTFSC-------QAASKLPCGACPNCVERLAALR 201
>gi|283853712|ref|ZP_06370941.1| ExsB family protein [Desulfovibrio sp. FW1012B]
gi|283570890|gb|EFC18921.1| ExsB family protein [Desulfovibrio sp. FW1012B]
Length = 201
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 81/220 (36%), Gaps = 37/220 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
++ +L SGG DS++ W F + DYGQ+ E+ V K+I
Sbjct: 1 MVKNSAILLSGGMDSTSLAFWKKPNF----AFTIDYGQKAAMAEIRAARQVAKEI----- 51
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAY 124
G H + + + N P+T + P RN + + AA A
Sbjct: 52 ------GISHDTIAIDCSSLGSGDMAMAAPLP----NAPSTDWWPFRNQLLITLAAMKAI 101
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
I + IG+ ++D S Y D D + I ++ E ++ V P + + E ++
Sbjct: 102 CRNINLLYIGLVKSDSS-YKDGCSDFVDKISRTLSF-QEGNIEVMAPAIDMTAAELVNMS 159
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
+ +L SH+C + + C C C
Sbjct: 160 KI------PRTLLAWSHSC--------HVSDFACGRCRGC 185
>gi|213692725|ref|YP_002323311.1| ExsB family protein [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213524186|gb|ACJ52933.1| ExsB family protein [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 251
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 37/241 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLC 55
+I+ LL SGG DS+T L L++ + ++F++G Q +
Sbjct: 1 MIQNHNRVALLLSGGPDSTTLLYDLLNQGKEIYAVTFNFGETEGCNESQHAQR--IVTNL 58
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
+++ + + + LP + N +Q P +
Sbjct: 59 HSERLHHYQYDFSEQFKRFYELPQPQFLRKAFGPFVVAPNKEEHVQ---------PFGSA 109
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTP 171
I L+ A+ A + I ++ V D + + D A+ T G E VT HTP
Sbjct: 110 IALMLMASWALKHDIVDVYYAVHSND-AVFHDNHASYFEALHTVTVECEGDEYGVTFHTP 168
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + K + +G + ++ +C LG C C C R+ +
Sbjct: 169 YLSINKCAVIQKGMGLG------VPFGDTWSCALGGT-------VHCGVCDPCRDRRTSF 215
Query: 232 M 232
Sbjct: 216 E 216
>gi|289209582|ref|YP_003461648.1| Queuosine synthesis-like protein [Thioalkalivibrio sp. K90mix]
gi|288945213|gb|ADC72912.1| Queuosine synthesis-like protein [Thioalkalivibrio sp. K90mix]
Length = 217
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/224 (20%), Positives = 75/224 (33%), Gaps = 33/224 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
LLL SGG +SS L+ + + L DYGQRN R I L +
Sbjct: 15 LLLLSGGIESSALLAQRHAQGRPLRALWVDYGQRN------AERERAAIRALGADYGVDP 68
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
E + L L A + + + +P RN++ L A LA G I
Sbjct: 69 VE---MDLRALRQ----------AFAKRSEWVAHVPLPQRNLLVLALAINLAEHQGAGRI 115
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
++ + D P R I + A+ + + + PL+ K + +G
Sbjct: 116 LLALNREDQGHGPGSRPSFIGRL-AALADELVPGLAIEAPLIAQSKADIIYTTDPLG--- 171
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ + +C C CP C R+ +
Sbjct: 172 ---IDWSRTWSC-------LLAQSLHCGRCPQCQARRAAFASAG 205
>gi|89514485|gb|ABD75116.1| succinoglycan biosynthesis regulator ExsB [Sinorhizobium saheli]
Length = 139
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
S + L SGG DS+ A++ ++ + +YGQR EL +K+
Sbjct: 2 SVVALVSGGLDSTLIAYLAIEEGVKIHPIFVNYGQRALDRELAACEGAMRKLG------- 54
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E + L+ G + S LT ++D F PGRN++FL+ AA AY++G
Sbjct: 55 ---LELTVADLSGYGVLIRSGLTDPSLRVLEDA-----FTPGRNMLFLLVAAAHAYQVGA 106
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
I IG+ + S +PD ++ E I
Sbjct: 107 DAISIGLLHEETSLFPDQTSAFLQEAEALI 136
>gi|288818720|ref|YP_003433068.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|288788120|dbj|BAI69867.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|308752307|gb|ADO45790.1| Queuosine synthesis [Hydrogenobacter thermophilus TK-6]
Length = 203
Score = 111 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 27/220 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDSL 71
+LFSGG +S+T L L R + V + G+ ++ELE L ++ + SL
Sbjct: 8 VLFSGGVESTTLLYMYLQRKEIVYPVYIKMGESWERLELENAL----RLWQYTKSRYASL 63
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
++ L + G I S Q + + F+P RN+ + A A + +
Sbjct: 64 RPLRVINLQVSGAIRKS--------PYQVSEI---FIPLRNMSLITACALYALSKKVRRL 112
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
IG +PD I+ +E I+ G + ++ P L+K + K +
Sbjct: 113 AIGSLGL--YPFPDNSKSYIKELERLISEGSGTAFSIEMPFFGLEKGKIVK-------EF 163
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ + +C K + C C C RQ+
Sbjct: 164 YGKVPYHLTLSC--AMPKKVGKKILHCGKCIKCKERQEAL 201
>gi|260222251|emb|CBA31627.1| hypothetical protein Csp_D28070 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 143
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
SAL+LFSGGQDS+TCL+ AL R++RVET++FDY QR+ VELE RL V ++I P+
Sbjct: 1 MHTSALVLFSGGQDSTTCLAHALARYERVETIAFDYRQRHNVELEARLNVLREIKTRFPQ 60
Query: 67 WKDSLGEDHILPLAILGDISHSS 89
W LGEDH+L LA+LG++S +S
Sbjct: 61 WAAKLGEDHLLDLAVLGEVSETS 83
>gi|283781954|ref|YP_003372709.1| ExsB family protein [Pirellula staleyi DSM 6068]
gi|283440407|gb|ADB18849.1| ExsB family protein [Pirellula staleyi DSM 6068]
Length = 236
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 76/223 (34%), Gaps = 27/223 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKIVELMPKWKD 69
+L SGG DSS + L V + G Q EL I
Sbjct: 12 VLMSGGLDSSILVGKFLREGRTVHPIYIRTGLFWQ--SGELPAVQAFLAAIA------TA 63
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+L IL L + + D ++PGRN + LV AA GI
Sbjct: 64 NLRPLKILELPLDDLYTDHWSLTGSGTPADDTPDEAVYLPGRNALLLVKAAVYCQLHGIG 123
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ + S + D + ++A+N G S V + P L K E +L
Sbjct: 124 QLACAPLGS--SPFEDASSEFFTEYQSAMNRGSSSPVVLLRPFGELHKEEVMRLG----- 176
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
V L LE + +C G C +C C+ R++ +
Sbjct: 177 ---VGLPLELTFSC------IHPVDGTHCGTCNKCFERKEAFR 210
>gi|257486728|ref|ZP_05640769.1| ExsB family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331010197|gb|EGH90253.1| ExsB family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 201
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 36/217 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL L SGG DS W ++ +YGQ + E + K I E +
Sbjct: 2 KRAL-LLSGGMDSLAVAWWQRPE----VGITLNYGQ---LAAEAEIAASKTICEQLQI-- 51
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLG 127
E H++ + S + ++A D + P + + P RN + + AA A LG
Sbjct: 52 ----EHHVISID-----CRSIGSGDMAGGQADAHAPASDWWPYRNQMLVTLAAMKAISLG 102
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I + +G ++D S + D + + AI + + E + V P + L E ++A
Sbjct: 103 INKLYLGTVKSDGS-HRDGTPEFVAAISQLMAI-QEGEMIVEAPAIGLSTVELVRIA--- 157
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
G + L +H+C ++ C +C C
Sbjct: 158 GVPSSM---LAWAHSC--------HKSNVACGNCRGC 183
>gi|148982372|ref|ZP_01816737.1| predicted aluminum resistance protein [Vibrionales bacterium
SWAT-3]
gi|145960508|gb|EDK25874.1| predicted aluminum resistance protein [Vibrionales bacterium
SWAT-3]
Length = 86
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+++FSGGQDS+TCL AL +D V ++FDYGQR+K+E+E + K++
Sbjct: 2 KKAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHKLEIEVAESLAKEL-------- 53
Query: 69 DSLGEDHILPLAILGDISHSSLTKN 93
+ ++ + +L +++ SSLT++
Sbjct: 54 -GVKAHKVMDVTLLNELAISSLTRD 77
>gi|13475374|ref|NP_106938.1| hypothetical protein mll6423 [Mesorhizobium loti MAFF303099]
gi|14026126|dbj|BAB52724.1| mll6423 [Mesorhizobium loti MAFF303099]
Length = 198
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 49/215 (22%), Positives = 81/215 (37%), Gaps = 39/215 (18%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDSL 71
LL SGG DS + W L+ DYGQ+ + E++ V + L
Sbjct: 5 LLLSGGMDSVSIAWWLRPD----VALTIDYGQKPAEAEIDAAGHVAQ-----------LL 49
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVPGRNIIFLVFAATLAYRLGITN 130
G H + + + ++A D P + + P RN + + A A R G++
Sbjct: 50 GISHEVIRVDCSSLG----SGDMAGTAPDAAAPVSEWWPFRNQLLVTLAGMAAVRHGVSR 105
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL-AQDIGG 189
++IG TD + + D R + + + + E + V P + L E + D G
Sbjct: 106 LLIGALATDGA-HADGRPEFVERASQLMAM-QEGGIVVEAPAIELDAVELVRRSGIDQGT 163
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
L +H+C+ G Y C C C
Sbjct: 164 -------LAWAHSCHTGN--------YACGRCRGC 183
>gi|168700757|ref|ZP_02733034.1| ExsB [Gemmata obscuriglobus UQM 2246]
Length = 232
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 72/222 (32%), Gaps = 21/222 (9%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+L SGG DS+ L+ A+ V L G + +E R L +L
Sbjct: 21 VLVSGGLDSAILLAEAVRACPVVFPLYVRSG-LHWEAVERAYLERF----LAAIAAPNLR 75
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+L T + D+ F+PGRN++ L + + +
Sbjct: 76 PLRVLDQPTADVYGAHWSTTGEGVPGADSADEAVFLPGRNVLLLAKPLIWCHLNAVPFVA 135
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
T + +PD ++ + V V P L K + + +
Sbjct: 136 TAPLGT--NPFPDATPAFYDGFAGIVSSAVRGDVRVLRPYAALHKVDVMRRGR------- 186
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
LE + +C R G C +C C R++ + +
Sbjct: 187 -GRPLEHTFSC------IRPVRGLHCGTCNKCAERRQAFRDA 221
>gi|15922208|ref|NP_377877.1| hypothetical protein ST1892 [Sulfolobus tokodaii str. 7]
gi|74573451|sp|Q96ZD9|QUEC1_SULTO RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
Full=7-cyano-7-carbaguanine synthase 1; AltName:
Full=Archaeosine biosynthesis protein queC 1; AltName:
Full=PreQ(0) synthase 1
gi|15622997|dbj|BAB66986.1| 202aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 202
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 87/231 (37%), Gaps = 38/231 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
ALLL SGG DSS+ + R + L +YGQR+ +L K I E + K
Sbjct: 2 KALLLMSGGLDSSSAAYYYTRRGLDFDCLFINYGQRSAR---MQLRSSKIICEKLNK--- 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + + + ++ S + I RN++ + A A G
Sbjct: 56 ---KLLVADIRKIRELFISDIWLKPHEPIT----------HRNLVIIPIAIAFAKEKGYE 102
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I+I + D Y R + I+ ++ NLG V V TP + K KL G
Sbjct: 103 EIIIASVKEDCE-YEQNRIEIIKELK---NLGEILKVKVSTPFAGMPKSFLLKLGVSAGL 158
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ +++C LG + Y C C C R++ + QD
Sbjct: 159 DPSL------TYSCLLGHK-------YHCGQCSQCLKRKEAFK--SANIQD 194
>gi|115375767|ref|ZP_01463020.1| ExsB superfamily [Stigmatella aurantiaca DW4/3-1]
gi|310824072|ref|YP_003956430.1| exoenzyme s synthesis protein b/queuosine synthesis family protein
[Stigmatella aurantiaca DW4/3-1]
gi|115367241|gb|EAU66223.1| ExsB superfamily [Stigmatella aurantiaca DW4/3-1]
gi|309397144|gb|ADO74603.1| Exoenzyme S synthesis protein B/queuosine synthesis family protein
[Stigmatella aurantiaca DW4/3-1]
Length = 198
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 36/218 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+AL L SGG DS W L+ DYGQR +
Sbjct: 2 KTAL-LLSGGMDSIAIAWWRRPE----LALTVDYGQR----------SALAELRAAASAA 46
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLG 127
+++G +H+ A L + + + + P T + P RN + + AA A G
Sbjct: 47 EAMGIEHLTVEADLSALGSGDMAGAEPLSLA----PVTEWWPFRNQMLVTLAAMKAVAHG 102
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ ++IG +TD + D R D + A++ + L E + + P + L E +
Sbjct: 103 VQRLLIGTLKTDG-LHADGRPDFVMALDALLRL-QEGGLRLEAPAIALTSAELIR----- 155
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
++ +L +H+C++G + C C C
Sbjct: 156 -TSNIPMEVLAWAHSCHVGI--------HACGQCRGCQ 184
>gi|83591056|ref|YP_431065.1| ExsB [Moorella thermoacetica ATCC 39073]
gi|83573970|gb|ABC20522.1| preQ(0) biosynthesis protein QueC [Moorella thermoacetica ATCC
39073]
Length = 192
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 79/218 (36%), Gaps = 43/218 (19%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + + + V L YGQ + E + ++
Sbjct: 5 LVLLSGGIDSAALVHYYRSKNTSVYGLHVQYGQ--------------PVAEREAQAAKAI 50
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ + L I + + + + L RN IF++ A GI +
Sbjct: 51 AAHYGIDLRI-------AHIQPPLARKGEEYL------CRNAIFVLIACAN-LSPGINRV 96
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
+G+ + Y DC + ++ ++ VTV P + K E ++ G
Sbjct: 97 ALGIHSG--TIYYDCSQGFMADMQRLLDGYFSGAVTVEAPFLRWSKLEVYQYCTSHG--- 151
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ ++ +++C C CP+CY R++
Sbjct: 152 ---VPVDLTYSC-------ERNNDEPCGQCPSCYDRRR 179
>gi|289678019|ref|ZP_06498909.1| ExsB family protein [Pseudomonas syringae pv. syringae FF5]
Length = 201
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 83/224 (37%), Gaps = 35/224 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LL SGG DS T W + +YGQ + +E LG
Sbjct: 5 LLLSGGMDSLTIAWWKRPD----IAFTLNYGQ----------LAAQAEIEASRTICQQLG 50
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLGITNI 131
H + + + ++A D+ P + + P RN + + AA A G+T++
Sbjct: 51 IPHHVIEVDCRQLG----SGDMAGTQADSLAPASDWWPYRNQMLVTLAAMKAISFGVTHL 106
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
+G ++D + D + + AI +++ E + V P + L E + + G
Sbjct: 107 WLGTVKSDGF-HRDGSPEFMSAISHLVSI-QEGGMVVEAPAIELSTAELVR---ESGIPA 161
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ L +H+C ++ C +C C + + E
Sbjct: 162 SL---LAWAHSC--------HKSHVACGNCRGCNKYMEVFQEVG 194
>gi|257074525|ref|YP_003162922.1| ExsB family protein [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257048746|gb|ACV37931.1| ExsB family protein [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 201
Score = 99 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 85/227 (37%), Gaps = 40/227 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+A LL SGG DS + W ++ DYGQ + + + I +
Sbjct: 2 TAALLLSGGMDSISIAWWKHPD----IAITIDYGQ---LPAAAEITASQAICRRLRIP-- 52
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLGI 128
H+L + HS + ++A + P T + P RN + + AA A L +
Sbjct: 53 ----HHVLQVD-----CHSLGSGDMAGLEPNALAPATDWWPYRNQLLITLAAMKAVTLEV 103
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ +G +D S + D + + A+ + + E +TV P + + + +
Sbjct: 104 RQLWLGTVASDAS-HRDGTPNFLSAMSALLAV-QEGGLTVSAPAIGMSTVDLVR------ 155
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC-----YLRQKG 230
+ IL +H+C+ C +C C LR+ G
Sbjct: 156 QSGVPLEILAWAHSCHKAD--------VACGACRGCNKYFEVLRELG 194
>gi|114798657|ref|YP_761231.1| hypothetical protein HNE_2538 [Hyphomonas neptunium ATCC 15444]
gi|114738831|gb|ABI76956.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 188
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 67/218 (30%), Gaps = 43/218 (19%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++L SGG DS+ C + + + DYG + +E K L
Sbjct: 10 VVLVSGGIDSAACAAMYANNGGSTTGVFVDYG--HPAAIEEFASAEKVCAALG------- 60
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ +L + + GRN + + A A + I
Sbjct: 61 -------IPLLKTSFSTDRITGPGEIV-----------GRNALLIWSAV-FASGIKKGVI 101
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
IGV + Y DC I ++ + V + P + K E +
Sbjct: 102 AIGVHAG--TTYYDCSSTFITRMDNMLAESTNGLVRISAPFVNASKSEVFS------YLQ 153
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ +++C G ++ C C +C R K
Sbjct: 154 RSKVEASLTYSCESGSKEP-------CGICASCQDRTK 184
>gi|289548645|ref|YP_003473633.1| Queuosine synthesis-like protein [Thermocrinis albus DSM 14484]
gi|289182262|gb|ADC89506.1| Queuosine synthesis-like protein [Thermocrinis albus DSM 14484]
Length = 196
Score = 98.8 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 74/224 (33%), Gaps = 33/224 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
++LFSGG +SST L L V + G EL V E
Sbjct: 2 KKVVVLFSGGVESSTLLYLKLKEGVCVYPVYVREGMSWEHAELFWAKKVWHHFKESYTN- 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++PL + + + L F+P RN+ AT A R
Sbjct: 61 --------LMPLCVCRGNG---------VPPRKGEL---FIPLRNLRLAASVATYALRRK 100
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I IG +PD ++ +E +++G + + PL + K +L
Sbjct: 101 AYEINIGSLG--AYPFPDNNLPYLKEVEKLLSVGSGQDIKLEAPLFGMDKRRIVEL---- 154
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
++ L + +C R + C C C R++
Sbjct: 155 ---YGPHVPLHLTFSCIKPIRKGNKF--FHCGKCVKCLEREEAL 193
>gi|163781921|ref|ZP_02176921.1| hypothetical protein HG1285_03523 [Hydrogenivirga sp. 128-5-R1-1]
gi|159883141|gb|EDP76645.1| hypothetical protein HG1285_03523 [Hydrogenivirga sp. 128-5-R1-1]
Length = 203
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 82/223 (36%), Gaps = 35/223 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+LFS G +S++ L + L+R L Y + L +++ + +L
Sbjct: 6 VLFSAGVESTSLLVYYLERGYLTLPL---YARCGLSWERTELKWSERLWAFLKYRYKNLM 62
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
P + L S +P RNI ++ A AY GI +
Sbjct: 63 PLKTFPASGLQPSKGSIE-----------------IPLRNITLVMGAVVHAYVKGIRKVA 105
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
+G +PD D + +E I+ G ++++ TP M ++K+E + +
Sbjct: 106 LGSLGI--YPFPDNNRDYLDRLEALISEGARENISLETPFMGMEKWEVVR-------EFY 156
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ +C + G C C C R++G+++
Sbjct: 157 RKAPYRLTFSC------VKPIIGKHCGKCEKCLERKEGFLKAG 193
>gi|222481179|ref|YP_002567415.1| ExsB family protein [Halorubrum lacusprofundi ATCC 49239]
gi|222454555|gb|ACM58818.1| ExsB family protein [Halorubrum lacusprofundi ATCC 49239]
Length = 195
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 79/221 (35%), Gaps = 33/221 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P ++LL SGG DS+T T++ DYGQ C ++ +
Sbjct: 2 PESVLLLSGGLDSATLAYTHRPD----LTVTVDYGQ----------CCADAEIQASAQIA 47
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D L +H + ++ ++ + D + P RN + + A R G
Sbjct: 48 DQLNLEHEVIEVDCENLGAGTMAGQQETDLGD---APEWWPYRNQLVVTLVAMKVVRRGA 104
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+++G D S + D + +++ ++ E + V P + E ++
Sbjct: 105 DRLLVGAVADDQS-HADGEAEFFELMDSLLSF-QEGDLGVVAPAIDRTTEEFV---CEVN 159
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ + L +H+C C C +C RQ+
Sbjct: 160 PPESL---LGWTHSC--------TASNTACGECRSCKKRQR 189
>gi|330988020|gb|EGH86123.1| ExsB family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 201
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 33/223 (14%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LL SGG DS W + +YGQ + +E L
Sbjct: 5 LLLSGGMDSLALAWWKRPD----IAFTLNYGQ----------LAAQAEIEASRTICRQLN 50
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
H + + + A + + + P RN + + A A G+T++
Sbjct: 51 ISHQVIEIDCRQLGSGDMAGTRADDLA---PASDWWPYRNQMLVTLTAMKAISFGVTHLW 107
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
+G +D + D + + AI ++L E + V P + L E +L+ G
Sbjct: 108 LGTVRSDGF-HKDGSPEFMTAISHLLSL-QEGGIVVEAPAIGLSTAELVRLS---GIPAD 162
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ L +H+C ++ C +C C + + E
Sbjct: 163 L---LAWAHSC--------HKSYVACGNCRGCNKYMEVFQEVG 194
>gi|323478685|gb|ADX83923.1| ExsB family protein [Sulfolobus islandicus HVE10/4]
Length = 213
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 82/227 (36%), Gaps = 38/227 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKDS 70
LLLFS G DSS+ + + + L +YGQ +++L+ + +K+ +
Sbjct: 18 LLLFSSGLDSSSVAYYYAKKGLDFDCLFINYGQSSARMQLKYGKIICEKLKRRLIIINAK 77
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L P+ + RN++ + A A + G
Sbjct: 78 NLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIAYAKQNGYER 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+++ + D P+ R +E LG V TP + KY K+ G
Sbjct: 118 VIMATIKEDCEYEPNRRDI----MEKLKELGEILGVRFETPFVNFPKYLLLKIGIKSGLD 173
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +++C LG + Y C C C R + + + K +
Sbjct: 174 PSL------TYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 207
>gi|91787803|ref|YP_548755.1| ExsB [Polaromonas sp. JS666]
gi|91697028|gb|ABE43857.1| ExsB [Polaromonas sp. JS666]
Length = 282
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 73/232 (31%), Gaps = 41/232 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRK------KIVE 62
A+++FSGG DS WA + L+F + QR + E+ + + K +I++
Sbjct: 32 KAIVVFSGGPDSLAAALWAKSKKYDPWLLTFQFKQREQGGEMFASMLLAKTLGFPQEIID 91
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
H+L A ++ + + + A T
Sbjct: 92 FKSPMHSFEPTVHVLMHA-----GTTTTADRAQHHRMEFGA---------GMVMATACTF 137
Query: 123 AYRLGITNIVIGVCETDYSG----YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A I ++V G + D G Y + A ++ +H P K+
Sbjct: 138 AVYHQIDDVVWGATKDDVFGGRFEY---SQEFADAFANLVSCTTGRPFRIHVPFASKSKH 194
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+ + + S +C + C +C AC R+
Sbjct: 195 QV------LAEFSGKEDLFAMSWSC-------KVGSSIQCGTCTACVARRVA 233
>gi|323475964|gb|ADX86570.1| ExsB family protein [Sulfolobus islandicus REY15A]
Length = 213
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 82/227 (36%), Gaps = 38/227 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKDS 70
LLLFS G DSS+ + + + L +YGQ +++L+ + +K+ +
Sbjct: 18 LLLFSSGLDSSSVAYYYAKKGLDFDCLFINYGQSSARMQLKYGKIICEKLKRRLIIINAK 77
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L P+ + RN++ + A A + G
Sbjct: 78 NLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIAYAKQNGYER 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+++ + D P+ R +E LG V TP + KY K+ G
Sbjct: 118 VIMATIKEDCEYEPNRRDI----MEKLKELGEILGVRFETPFVNFPKYLLLKIGIKSGLD 173
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +++C LG + Y C C C R + + + K +
Sbjct: 174 PSI------TYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 207
>gi|148997816|ref|ZP_01825380.1| hypothetical protein CGSSp11BS70_02874 [Streptococcus pneumoniae
SP11-BS70]
gi|149011370|ref|ZP_01832617.1| hypothetical protein CGSSp19BS75_08167 [Streptococcus pneumoniae
SP19-BS75]
gi|168575048|ref|ZP_02721011.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
MLV-016]
gi|307068385|ref|YP_003877351.1| hypothetical protein SPAP_1765 [Streptococcus pneumoniae AP200]
gi|147756315|gb|EDK63357.1| hypothetical protein CGSSp11BS70_02874 [Streptococcus pneumoniae
SP11-BS70]
gi|147764360|gb|EDK71291.1| hypothetical protein CGSSp19BS75_08167 [Streptococcus pneumoniae
SP19-BS75]
gi|183578774|gb|EDT99302.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
MLV-016]
gi|306409922|gb|ADM85349.1| hypothetical protein SPAP_1765 [Streptococcus pneumoniae AP200]
Length = 177
Score = 95.7 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQIAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|330895673|gb|EGH27965.1| ExsB family protein [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 201
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 84/216 (38%), Gaps = 35/216 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ LL SGG DS + W ++ +YGQ + + + + I + +
Sbjct: 2 KSALLLSGGMDSLSIAWWKRPD----IAITLNYGQ---LAAKAEIAASRAICQRLEIP-- 52
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLGI 128
H+L + S ++A + D+ P + + P RN + + AA A G+
Sbjct: 53 ----HHVLEIDCRHLGSG-----DMAGRQADDLAPASDWWPYRNQMLVTLAAMKAISFGV 103
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
T++ +G ++D + D + + AI ++L E + V P + + +++ G
Sbjct: 104 THLWLGTVKSDVF-HRDGTPEFMAAISRLLSL-QEGGMVVEAPAIEMTTAGLVRIS---G 158
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
L +H+C+ C +C C
Sbjct: 159 IPASC---LAWAHSCHKAD--------VPCGNCRGC 183
>gi|227829808|ref|YP_002831587.1| ExsB family protein [Sulfolobus islandicus L.S.2.15]
gi|227456255|gb|ACP34942.1| ExsB family protein [Sulfolobus islandicus L.S.2.15]
Length = 213
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 82/227 (36%), Gaps = 38/227 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKDS 70
LLLFS G DSS+ + + + L +YGQ +++L+ + +K+ +
Sbjct: 18 LLLFSSGLDSSSVAYYYAKKSLDFDCLFINYGQSSARMQLKYGKIICEKLKRRLIIINAK 77
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L P+ + RN++ + A A + G
Sbjct: 78 NLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIAYAKQNGYER 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+++ + D P+ R +E LG V TP + KY K+ G
Sbjct: 118 VIMATIKEDCEYEPNRRDV----MEKLKELGEILGVRFETPFVNFPKYLLLKIGIKSGLD 173
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +++C LG + Y C C C R + + + K +
Sbjct: 174 PSL------TYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 207
>gi|148984203|ref|ZP_01817498.1| hypothetical protein CGSSp3BS71_03242 [Streptococcus pneumoniae
SP3-BS71]
gi|168486380|ref|ZP_02710888.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC1087-00]
gi|225857369|ref|YP_002738880.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae P1031]
gi|147923492|gb|EDK74605.1| hypothetical protein CGSSp3BS71_03242 [Streptococcus pneumoniae
SP3-BS71]
gi|183570619|gb|EDT91147.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC1087-00]
gi|225725333|gb|ACO21185.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae P1031]
gi|301800562|emb|CBW33202.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
Length = 177
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|149006573|ref|ZP_01830272.1| hypothetical protein CGSSp18BS74_02251 [Streptococcus pneumoniae
SP18-BS74]
gi|225859532|ref|YP_002741042.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae 70585]
gi|225861579|ref|YP_002743088.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298254878|ref|ZP_06978464.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298503504|ref|YP_003725444.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae TCH8431/19A]
gi|147761871|gb|EDK68834.1| hypothetical protein CGSSp18BS74_02251 [Streptococcus pneumoniae
SP18-BS74]
gi|225721293|gb|ACO17147.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae 70585]
gi|225727586|gb|ACO23437.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae Taiwan19F-14]
gi|298239099|gb|ADI70230.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae TCH8431/19A]
gi|327389943|gb|EGE88288.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA04375]
gi|332072931|gb|EGI83412.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA17545]
gi|332200321|gb|EGJ14394.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA47368]
Length = 177
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQ + +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQHHHLEIQIAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|332074122|gb|EGI84600.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA41301]
Length = 177
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|303246085|ref|ZP_07332366.1| tRNA methyl transferase-like protein [Desulfovibrio fructosovorans
JJ]
gi|302492481|gb|EFL52352.1| tRNA methyl transferase-like protein [Desulfovibrio fructosovorans
JJ]
Length = 182
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 43/221 (19%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L SGG DSS C + VE + F YGQ + E K I + +
Sbjct: 2 KKVYVLLSGGIDSSACAHFYQQADFLVEAIFFSYGQAASAKEE---IASKNIADHLGIHL 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + I ++ A+ R+
Sbjct: 59 TKYNLETTQTFSTGELIGRNAFFIFSAIFFS-------------------------RITN 93
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+I +G+ + Y DC I +N V + P + K + ++
Sbjct: 94 GSISLGIHAG--TTYYDCSAIFFDRINKLVNEYTNGCVNIQAPFLKWTKNDIYQ------ 145
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ +E +++C LG Y C C +C R+
Sbjct: 146 YFLSTKIPIELTYSCELGSD-------YPCGRCASCRDRKA 179
>gi|229578759|ref|YP_002837157.1| ExsB family protein [Sulfolobus islandicus Y.G.57.14]
gi|228009473|gb|ACP45235.1| ExsB family protein [Sulfolobus islandicus Y.G.57.14]
Length = 199
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 82/227 (36%), Gaps = 38/227 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKDS 70
LLLFS G DSS+ + + + L +YGQ +++L+ + +K+ +
Sbjct: 4 LLLFSSGLDSSSVAYYYAKKSLDFDCLFINYGQSSARMQLKYGKIICEKLKRRLIIINAK 63
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L P+ + RN++ + A A + G
Sbjct: 64 NLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIAYAKQNGYER 103
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+++ + D P+ R +E LG V TP + KY K+ G
Sbjct: 104 VIMATIKEDCEYEPNRRDV----MEKLKELGEILGVRFETPFVNFPKYLLLKIGIKSGLD 159
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +++C LG + Y C C C R + + + K +
Sbjct: 160 PSL------TYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 193
>gi|303254714|ref|ZP_07340816.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae BS455]
gi|301802471|emb|CBW35229.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
gi|302598426|gb|EFL65470.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae BS455]
Length = 177
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
+ HIL +++LG I ++ A+ I
Sbjct: 54 --EQGIRHHILDMSLLGQI--TAQPDFAAIHIS 82
>gi|320449532|ref|YP_004201628.1| archaeosine biosynthesis protein QueC [Thermus scotoductus SA-01]
gi|320149701|gb|ADW21079.1| archaeosine biosynthesis protein QueC [Thermus scotoductus SA-01]
Length = 206
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 80/221 (36%), Gaps = 27/221 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DSS L + D +E L+ Y + +K+ +
Sbjct: 4 LVMLSGGLDSSVLLYKLKKQ-DGLEGLAAVYLDLGTPPTQKEWRAAEKVASRLGVAIYRN 62
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
H L + +++ + P T P +LA ++G+ +
Sbjct: 63 RVPHFELGDRLFSPPELAFPGRESIQAGWTD-PCTMTP--------ITGSLAAKMGVEEV 113
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
+GV + D++ +P R + A+ + V + PL L K E L ++G
Sbjct: 114 YLGVIKDDFASHP--RLEAYLAL--VKKFLEFNQVRLKMPLSGLTKQEVVALGHELG--- 166
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ LEE+ +C C +C C R++ +
Sbjct: 167 ---VPLEETWSCVASGEAP-------CGACNPCIAREEAFA 197
>gi|284997107|ref|YP_003418874.1| ExsB family protein [Sulfolobus islandicus L.D.8.5]
gi|284445002|gb|ADB86504.1| ExsB family protein [Sulfolobus islandicus L.D.8.5]
Length = 213
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 82/227 (36%), Gaps = 38/227 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKDS 70
LLLFS G DSS+ + + + L +YGQ + +++L+ + +K+ +
Sbjct: 18 LLLFSSGLDSSSVAYYYAKKSLDFDCLFINYGQSSVRMQLKYGKIICEKLKRRLIIINAK 77
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L P+ + RN++ + A A + G
Sbjct: 78 NLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIAYAKQNGYER 117
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+++ D P+ R +E LG V TP + KY K+ G
Sbjct: 118 VIMATIREDCEYEPNRRDV----MEKLKELGEILGVRFETPFVNFPKYLLLKIGIKSGLD 173
Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+ +++C LG + Y C C C R + + + K +
Sbjct: 174 PSL------TYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 207
>gi|303258711|ref|ZP_07344691.1| hypothetical protein CGSSp9vBS293_06269 [Streptococcus pneumoniae
SP-BS293]
gi|303261875|ref|ZP_07347821.1| hypothetical protein CGSSp14BS292_10694 [Streptococcus pneumoniae
SP14-BS292]
gi|303263738|ref|ZP_07349660.1| hypothetical protein CGSSpBS397_07994 [Streptococcus pneumoniae
BS397]
gi|303265728|ref|ZP_07351627.1| hypothetical protein CGSSpBS457_09800 [Streptococcus pneumoniae
BS457]
gi|303268569|ref|ZP_07354361.1| hypothetical protein CGSSpBS458_09656 [Streptococcus pneumoniae
BS458]
gi|302636958|gb|EFL67447.1| hypothetical protein CGSSp14BS292_10694 [Streptococcus pneumoniae
SP14-BS292]
gi|302640212|gb|EFL70667.1| hypothetical protein CGSSpBS293_06269 [Streptococcus pneumoniae
SP-BS293]
gi|302641848|gb|EFL72203.1| hypothetical protein CGSSpBS458_09656 [Streptococcus pneumoniae
BS458]
gi|302644855|gb|EFL75103.1| hypothetical protein CGSSpBS457_09800 [Streptococcus pneumoniae
BS457]
gi|302646776|gb|EFL77001.1| hypothetical protein CGSSpBS397_07994 [Streptococcus pneumoniae
BS397]
Length = 177
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
+ HIL +++LG I ++ A+ I
Sbjct: 54 --EQGIRHHILDMSLLGQI--TAQPDFAAIHIS 82
>gi|194397564|ref|YP_002038369.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae G54]
gi|194357231|gb|ACF55679.1| conserved hypothetical protein [Streptococcus pneumoniae G54]
Length = 177
Score = 93.4 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|168491358|ref|ZP_02715501.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC0288-04]
gi|183574270|gb|EDT94798.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC0288-04]
Length = 177
Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ +E ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQHYETIEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITTQPDFATIHISYIPDKL 88
>gi|168488522|ref|ZP_02712721.1| NADPH-dependent 7-cyano-7-deazaguanine reductase
(7-cyano-7-carbaguanine reductase) (preq(0) reductase)
(nadph-dependentnitrile oxidoreductase) [Streptococcus
pneumoniae SP195]
gi|237649171|ref|ZP_04523423.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae CCRI
1974]
gi|237820713|ref|ZP_04596558.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae CCRI
1974M2]
gi|183572727|gb|EDT93255.1| NADPH-dependent 7-cyano-7-deazaguanine reductase
(7-cyano-7-carbaguanine reductase) (preq(0) reductase)
(nadph-dependentnitrile oxidoreductase) [Streptococcus
pneumoniae SP195]
gi|332072592|gb|EGI83075.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA17570]
Length = 177
Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHLEIQIAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|167574274|ref|ZP_02367148.1| hypothetical protein BoklC_30830 [Burkholderia oklahomensis C6786]
Length = 198
Score = 93.0 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 74/223 (33%), Gaps = 33/223 (14%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LL SGG DS W ++ YGQ + ++ +
Sbjct: 5 LLLSGGMDSIAIAYWVR----PAVGITVAYGQ---------RAAQAEVRAAAAVCEALNI 51
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
E H++ A L + + + + + P RN + + AA A L + ++
Sbjct: 52 EHHVID-ADLSTLGSGDMAGLAPSTLA---PVSEWWPFRNQMLVTLAAMRAVALDVNRLL 107
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
IG TD + D + + I A+ + E + + P + L E K + G
Sbjct: 108 IGSLRTDG-IHADGKPEFIAAMSAVLQ-CQEGGIALEAPAIKLSGAELIKTS---GVPID 162
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
+ L +H+C + C C C + E
Sbjct: 163 L---LAWAHSC--------HVANEACGICRGCRKHYETLEELG 194
>gi|182684725|ref|YP_001836472.1| hypothetical protein SPCG_1755 [Streptococcus pneumoniae CGSP14]
gi|182630059|gb|ACB91007.1| hypothetical protein SPCG_1755 [Streptococcus pneumoniae CGSP14]
Length = 190
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ K
Sbjct: 13 TMKRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITRETAK------ 66
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 67 ----EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 101
>gi|169833883|ref|YP_001695150.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
Hungary19A-6]
gi|168996385|gb|ACA36997.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae Hungary19A-6]
Length = 177
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL WA+ ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWAMQYYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|332199787|gb|EGJ13862.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA41317]
Length = 177
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQRHHLEIQIAREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|332797466|ref|YP_004458966.1| ExsB family protein [Acidianus hospitalis W1]
gi|332695201|gb|AEE94668.1| ExsB family protein [Acidianus hospitalis W1]
Length = 196
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 82/232 (35%), Gaps = 51/232 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
LLL+SGG +S+ L D V+ L DYGQR + E+ + L
Sbjct: 3 LLLYSGGINSTVALYRFK---DIVDCLFIDYGQR----------SARMQREMAKYHCEKL 49
Query: 72 GEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
G+ I + + LG + L + I RN+I L A T A
Sbjct: 50 GKKLIEIHIPSLGKAFYDGLGMRLNEPIV----------HRNVILLSIALTYAKERKYDE 99
Query: 131 IVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
++ + C + I ++ + V + P + L K K+
Sbjct: 100 VIFATASEE------CLFEKDKPLIISTMKRLAEI---YGVKLSMPFVNLSKSLLVKMGV 150
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
G + LE++++C LG + Y C C C R+ + E +
Sbjct: 151 KQGIE------LEKTYSCLLGHK-------YHCGVCSQCQTRKIAFKEAGVR 189
>gi|307127972|ref|YP_003880003.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae 670-6B]
gi|306485034|gb|ADM91903.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae 670-6B]
Length = 177
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|332201182|gb|EGJ15253.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA47901]
Length = 177
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|154250791|ref|YP_001411615.1| ExsB family protein [Parvibaculum lavamentivorans DS-1]
gi|154154741|gb|ABS61958.1| ExsB family protein [Parvibaculum lavamentivorans DS-1]
Length = 197
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 73/213 (34%), Gaps = 34/213 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LL SGG DSS W ++ DYGQ+ + + L
Sbjct: 4 LLLSGGIDSSALAHWTRPD----ICVTLDYGQQAALGEAAASRAICSELHL--------- 50
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
E ++ + + S S + A+ F P RN + + AA L +G+ ++
Sbjct: 51 EHKLISVDLSSLGSGSMAGRETAL----GGAAPEFWPYRNQMLVTLAAMLLQPIGLRELM 106
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
IG TD + D I+ + A+ E VTV P L E KL
Sbjct: 107 IGTVATD--LHADGSVRFIQTLN-ALMRLQEGCVTVTAPAQNLTSTELLKL------SSF 157
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
++ + +C + Y C C C
Sbjct: 158 PRELIGVTFSC--------HLHRYACGQCSGCI 182
>gi|149002066|ref|ZP_01827020.1| hypothetical protein CGSSp14BS69_10156 [Streptococcus pneumoniae
SP14-BS69]
gi|149020842|ref|ZP_01835371.1| hypothetical protein CGSSp23BS72_02354 [Streptococcus pneumoniae
SP23-BS72]
gi|147759875|gb|EDK66865.1| hypothetical protein CGSSp14BS69_10156 [Streptococcus pneumoniae
SP14-BS69]
gi|147930483|gb|EDK81466.1| hypothetical protein CGSSp23BS72_02354 [Streptococcus pneumoniae
SP23-BS72]
Length = 177
Score = 89.5 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWDMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|111656750|ref|ZP_01407633.1| hypothetical protein SpneT_02001957 [Streptococcus pneumoniae
TIGR4]
gi|225855206|ref|YP_002736718.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae JJA]
gi|225723556|gb|ACO19409.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
pneumoniae JJA]
Length = 177
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K AL++FSGGQDS+TCL W + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQLALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|329723264|gb|EGG59794.1| ExsB [Staphylococcus epidermidis VCU144]
Length = 83
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M+ AL++FSGGQDS+TCL +A F VE ++F+YGQR+ E+E K+
Sbjct: 1 MSQNDLNKEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDKEIEVAKKNCKR 59
>gi|15903645|ref|NP_359195.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae R6]
gi|15459271|gb|AAL00406.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
Length = 190
Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQ + +E++ + K
Sbjct: 13 TMKHQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQHHHLEIQITREIAK------ 66
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 67 ----EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 101
>gi|148990489|ref|ZP_01821630.1| hypothetical protein CGSSp6BS73_12431 [Streptococcus pneumoniae
SP6-BS73]
gi|147924247|gb|EDK75343.1| hypothetical protein CGSSp6BS73_12431 [Streptococcus pneumoniae
SP6-BS73]
gi|301794749|emb|CBW37202.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
Length = 177
Score = 88.4 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQ + +E++ + K
Sbjct: 2 KHQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQHHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|146304331|ref|YP_001191647.1| ExsB family protein [Metallosphaera sedula DSM 5348]
gi|145702581|gb|ABP95723.1| ExsB family protein [Metallosphaera sedula DSM 5348]
Length = 199
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 40/224 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L L SGG DS+ + + ++ DYGQR E V+ +
Sbjct: 2 KSLFLVSGGLDSTAGMYRFREMDYDC--MTIDYGQRAFKEQ----------VKYARINCE 49
Query: 70 SLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
LG+ I + + +GD + +P+ + RN + + FA T A +G
Sbjct: 50 KLGKRLIEVNMKKVGDRFREGKSL----------IPHEPIRHRNAVTIPFALTYASEMGY 99
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ + + + Y + + I A+ + + P + L K ++ + G
Sbjct: 100 SAVYVFTVSEECQ-YESNKPEIISALRKLAEAL---RIGLIFPFLGLSKAHVLRMGIEHG 155
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
L +++C LG R C C C R+ +
Sbjct: 156 MDPL------NTYSCLLGHRA-------HCGRCSQCESRKMAFK 186
>gi|168483299|ref|ZP_02708251.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC1873-00]
gi|221232515|ref|YP_002511668.1| hypothetical protein SPN23F_17880 [Streptococcus pneumoniae ATCC
700669]
gi|172043242|gb|EDT51288.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC1873-00]
gi|220674976|emb|CAR69553.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
700669]
Length = 177
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K SAL++FSGGQDS TCL W + ++ VE ++F YGQR+ +E++ + K
Sbjct: 2 KRQSALVVFSGGQDSKTCLFWTMQHYETVEAVTFAYGQRHHLEIQITREIAK-------- 53
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ HIL +++LG I+ + + + L
Sbjct: 54 --EQGIRHHILDMSLLGQITAQPDFATIHISYIPDKL 88
>gi|188581765|ref|YP_001925210.1| ExsB family protein [Methylobacterium populi BJ001]
gi|179345263|gb|ACB80675.1| ExsB family protein [Methylobacterium populi BJ001]
Length = 210
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 76/213 (35%), Gaps = 36/213 (16%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDSL 71
LL SGG DS+ +W L+ DYGQR K E+ V ++ L
Sbjct: 4 LLLSGGLDSAAIAAWQRPD----VCLTVDYGQRPAKGEIAAADSVARE-----------L 48
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
G H + L + L A + + P RN + + A G+T I
Sbjct: 49 GLRHEIARVDLSALGLGPLAGRAASDLAR---APEWWPYRNQMLVTLAGMRFVAEGLTEI 105
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
++G TD + D R +R ++ ++L E V V P L E +
Sbjct: 106 LLGAIRTD--VHADGRAPFLRTVDRLMHL-QEGGVRVMAPARHLSALELVRR------SG 156
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
+ +L + +C + Y C C C
Sbjct: 157 IPRSLLGATFSC--------HVMEYACGRCRGC 181
>gi|260222250|emb|CBA31625.1| hypothetical protein Csp_D28060 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 82
Score = 85.7 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 8/74 (10%)
Query: 174 WLKKYETWKLAQDIG--------GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
W+ K +TW+LA ++G GQ LV+L++E +HTCYLG R R+ WGYGC +CPAC
Sbjct: 5 WINKAQTWELAHELGERSGVPEGGQALVDLVVEHTHTCYLGDRTHRHAWGYGCGTCPACE 64
Query: 226 LRQKGWMEFKEKYQ 239
LR KG+ F +K
Sbjct: 65 LRAKGYAGFVDKVN 78
>gi|188583254|ref|YP_001926699.1| ExsB family protein [Methylobacterium populi BJ001]
gi|179346752|gb|ACB82164.1| ExsB family protein [Methylobacterium populi BJ001]
Length = 214
Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 68/226 (30%), Gaps = 34/226 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+LLFSGG DS+ W L DYGQR I ++L
Sbjct: 3 VLLFSGGLDSTALAWWQRPD----ACLFVDYGQR---PAAGERAAATSIAAEFGLRLETL 55
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
D + + P RN I + A G++ I
Sbjct: 56 QVDLSGLGLGPLAGGEPAALARAPE----------WWPYRNQILVTLAGMRFVAEGLSEI 105
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
+IG TD + D R +R ++ + L E V V P L +
Sbjct: 106 LIGTVATD--VHADGRAPFLRTLDRLMRL-QEGGVRVVAPARHLSGPAL------LAASG 156
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
L L + +C + Y C C C ++ F +
Sbjct: 157 LPASALGATFSC--------HVMEYACGQCRGCEKHRETLRSFGLR 194
>gi|255021579|ref|ZP_05293622.1| Archaeosine biosynthesis protein queC [Acidithiobacillus caldus
ATCC 51756]
gi|254968967|gb|EET26486.1| Archaeosine biosynthesis protein queC [Acidithiobacillus caldus
ATCC 51756]
Length = 206
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 89/236 (37%), Gaps = 36/236 (15%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + +LLL SGG +S T L+ A + DYGQR E R+ + + L
Sbjct: 1 MPQPERSLLLCSGGVESFT-LTHAFGTDSGLYLFFLDYGQRAAAEEWKRVQNLARNLRL- 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
E L GD + + P RN++ + AA +A
Sbjct: 59 --------ERERFDLRDFGDAVGRLRPQRYHVPT----------PHRNLLAVAAAANVAE 100
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
LG +V+G D + + A+ + S + + PL +K +L
Sbjct: 101 SLGRNTVVLGTTADDGRTDRNANRAFLSALAATL---SSSGLYLALPLAQYRKAAVIRLG 157
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
QD+G + E S++C +G + C CP C R++ + E ++D
Sbjct: 158 QDLG------VPWEMSYSCIVGYEAQ-------CGRCPQCIRRREAFREAGLSHRD 200
>gi|307105483|gb|EFN53732.1| hypothetical protein CHLNCDRAFT_136308 [Chlorella variabilis]
Length = 274
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 32/223 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWAL--DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K S ++L SGG +S+ L++ D + L DYGQ+N + E + + L
Sbjct: 60 KQGSTVVLVSGGIESAALLAYWKHWDHAQHLLPLFIDYGQKNVRQEEAAQQAMCRHLGLD 119
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ H L +A +G +P RN++ L AA+ A
Sbjct: 120 FNAINASMVAHQLNMATVGAGRRYHDP----------------LPHRNLLLLSLAASFAA 163
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G NI I + + D Y + IE+ + +E + + PL+ L+K++ +
Sbjct: 164 DSGAANIAICLNKDDLGVYSSASLPFLHHIES-LYETLEPPIQLLMPLLALRKHQVITMG 222
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
+ +++C G C +C C R
Sbjct: 223 HQVAA------PWHLTYSCAEGGAAP-------CGACEPCRGR 252
>gi|213418073|ref|ZP_03351147.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 85
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 159 NLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
NLGM + TPLMW+ K ETW LA G ++L+ EE+ TCY G + G GC
Sbjct: 1 NLGMAKDIRFETPLMWIDKAETWALADYWGQ---LDLVREETLTCYNGIK------GDGC 51
Query: 219 NSCPACYLRQKGWMEFKEKYQ 239
C AC LR G +
Sbjct: 52 GHCAACNLRANGLNHYLSNKA 72
>gi|330834525|ref|YP_004409253.1| ExsB family protein [Metallosphaera cuprina Ar-4]
gi|329566664|gb|AEB94769.1| ExsB family protein [Metallosphaera cuprina Ar-4]
Length = 197
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 38/228 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L L SGG DS++ + D + +YGQR ++K E+ +
Sbjct: 2 KSLFLVSGGLDSTSGMFRYKDIDYDCMII--NYGQR-------SYRQQRKYAEINCNKLE 52
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+L +G+ + T +P+ + RN + A G +
Sbjct: 53 KKLI--VLDARGIGEAFNRDKTL----------IPHEPILHRNAAIIPIVLVYASERGYS 100
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ + + + P + + + +L +V + P + L K + K+ + G
Sbjct: 101 DVYVFIVSEECKYEP-NKP---KVLSLLSSLAETLNVKLVFPFIGLPKAQVLKIGMNHGM 156
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
+++C LG R C C C R++ ++ K
Sbjct: 157 NP------ANTYSCILGHR-------CHCGKCSQCEARKQAFINAGVK 191
>gi|218263752|ref|ZP_03477748.1| hypothetical protein PRABACTJOHN_03438 [Parabacteroides johnsonii
DSM 18315]
gi|218222534|gb|EEC95184.1| hypothetical protein PRABACTJOHN_03438 [Parabacteroides johnsonii
DSM 18315]
Length = 73
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K +AL+ FSGGQDS+TCL WA F RVE + F YGQ++ +E+E +
Sbjct: 1 MKHQEAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA------- 53
Query: 65 PKWKDSLGEDHILPLAILGDI 85
D+ +L ++++ +
Sbjct: 54 ---ADADVPFQLLDVSLISQL 71
>gi|325919316|ref|ZP_08181354.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
gi|325550214|gb|EGD21030.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
Length = 74
Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS+ ++ A ++ V LS YGQR+ EL+ V
Sbjct: 2 KKAVVLLSGGMDSAAVVALAQEQGFAVHALSVRYGQRHTSELDAAARVA---------TA 52
Query: 69 DSLGEDHILPLAILGDISHSSLT 91
+ ++ + L I S+LT
Sbjct: 53 QGVIAHKVVDVD-LRSIGGSALT 74
>gi|15897467|ref|NP_342072.1| hypothetical protein SSO0544 [Sulfolobus solfataricus P2]
gi|284175915|ref|ZP_06389884.1| hypothetical protein Ssol98_14833 [Sulfolobus solfataricus 98/2]
gi|6015928|emb|CAB57755.1| hypothetical protein [Sulfolobus solfataricus P2]
gi|13813706|gb|AAK40862.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602212|gb|ACX91815.1| Queuosine synthesis-like protein [Sulfolobus solfataricus 98/2]
Length = 245
Score = 81.8 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 77/234 (32%), Gaps = 50/234 (21%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKIVEL 63
A++ +GG DS+ + + YG Q ELE + KK+
Sbjct: 1 MVEEAIIQLTGGIDSTVLAYYLKKDKYVLHGTFIHYGYPPQ--IKELELVKELSKKLD-- 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+PL I+ S+ + + FV + A+ +
Sbjct: 57 -------------IPLKIIDFSSYIKSFDLPPIDSIQYIIKYQFV-------VEILASFS 96
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + +G + + + R ++ IE+ + V P + K E KL
Sbjct: 97 AYPNLNTMFVGWLKDE----WNNRISLLKDIESLM------GFKVIAPFHTMVKSEVIKL 146
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + ++H+C C C AC R++ + E K K
Sbjct: 147 GNELG------VDFTKTHSC-------IVSGKMHCGICMACRSRRRAFEEVKVK 187
>gi|119715335|ref|YP_922300.1| ExsB family protein [Nocardioides sp. JS614]
gi|119535996|gb|ABL80613.1| preQ(0) biosynthesis protein QueC [Nocardioides sp. JS614]
Length = 183
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 80/226 (35%), Gaps = 51/226 (22%)
Query: 5 IKKAPSAL-LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVE 62
+K+ + + +L SGG DS+ L+ +R ++ DYGQ VE + +
Sbjct: 1 MKRPATDICVLLSGGVDSALVLAMLSNR--SPVSVWVDYGQPVADVERQASRAIANH--- 55
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
G + K +A L GRN + + A ++
Sbjct: 56 -------------------FGSPWMEVVIKGLAPPASGEFL------GRNDLLVAAALSV 90
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A G + IG +GY DC + + ++ + PL L K + ++
Sbjct: 91 A---GGGFVAIGTHAG--TGYADCSLAWAGSWQALLDAQHGGTAGLLAPLSNLDKAQVYE 145
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
LA G + +E +H+C C SC +C R+
Sbjct: 146 LAVANG------VPIELTHSC--------ETTAAPCGSCSSCADRR 177
>gi|195952878|ref|YP_002121168.1| ExsB family protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932490|gb|ACG57190.1| ExsB family protein [Hydrogenobaculum sp. Y04AAS1]
Length = 196
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 28/217 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L S G DS + L++ +++ + + G + + E L + K
Sbjct: 2 KVVSLVSSGFDSISLLNYYINKNYEIYPIYVKSGFKWEEEELKHLKDIIDHISKSYKLIK 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L H P D + + + ++I P RN+ L+ A AY +
Sbjct: 62 PLKVSH-APNDFFEDFNERAFINDEDVEI----------PFRNLDLLISALKYAYAVDAN 110
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I IG+ + D ++ I+ I M V TP + + K + +
Sbjct: 111 LIAIGIMGL--VAFKDNSYNFIKTINDLF--SMYGDYKVDTPFLGMSKKDVF-------D 159
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
+ + + +++ C G C C C
Sbjct: 160 RYFIKELFDKAFCCMNPTD------GKECGVCSKCKE 190
>gi|320458883|dbj|BAJ69504.1| hypothetical protein BLIJ_1925 [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 137
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 16/115 (13%)
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKK 177
A+ A + I ++ V D + + D A+ T G E VT HTP + + K
Sbjct: 2 ASWALKHDIVDVYYAVHSND-AVFHDNHASYFEALHTVTVECEGDEYGVTFHTPYLSINK 60
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+ +G + ++ +C LG C C C R+ +
Sbjct: 61 CAVIQKGMGLG------VPFGDTWSCALGGT-------VHCGVCDPCRDRRTSFE 102
>gi|229579382|ref|YP_002837780.1| ExsB family protein [Sulfolobus islandicus Y.G.57.14]
gi|229581857|ref|YP_002840256.1| ExsB family protein [Sulfolobus islandicus Y.N.15.51]
gi|228010096|gb|ACP45858.1| ExsB family protein [Sulfolobus islandicus Y.G.57.14]
gi|228012573|gb|ACP48334.1| ExsB family protein [Sulfolobus islandicus Y.N.15.51]
Length = 244
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 51/234 (21%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKIVEL 63
A++ +GG DS+ + D+ + YG Q ELE + KK+
Sbjct: 1 MVEEAIIQLTGGIDSTVLAYYLKDK-YVLHGTFIYYGYPPQ--IRELELVKELSKKLD-- 55
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+PL I+ S+ + + FV + A+ +
Sbjct: 56 -------------VPLKIIDFSSYIKSFDLPPIDSIQYIIKYQFV-------IEILASFS 95
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + +G + ++S + ++ IE+ + V P + K E KL
Sbjct: 96 AYPNLNTMFVGWLKDEWS----NKMSILKGIESLM------GFKVMAPFHTMVKSEVIKL 145
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + ++H+C C C C R++ + E K K
Sbjct: 146 GNELG------VDFTKTHSC-------IVSGKMHCGICMPCRSRRRAFEEAKVK 186
>gi|15606199|ref|NP_213576.1| hypothetical protein aq_848 [Aquifex aeolicus VF5]
gi|2983394|gb|AAC06979.1| putative protein [Aquifex aeolicus VF5]
Length = 110
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 40/123 (32%), Gaps = 19/123 (15%)
Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYP--DCRHDTIRAIETAINLGMESHVTV 168
RN I A GI IG YP D + + + I++ + +
Sbjct: 2 RNFILCTAGALYGVPKGINTCAIGSLGM----YPFEDNKKEFFEKLSETISMSLGKEFYI 57
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
TP M + K+E K + LE S TC G C C C R+
Sbjct: 58 ETPFMGMHKHEVIKR-------YGKFIPLELSLTC------INPVNGEPCGKCIKCKERE 104
Query: 229 KGW 231
+
Sbjct: 105 EAL 107
>gi|300774165|ref|ZP_07084033.1| ExsB superfamily protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300758976|gb|EFK55804.1| ExsB superfamily protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 198
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 33/213 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LL SGG DS + +YGQ + + V + I L L
Sbjct: 8 LLLSGGVDSICLAYGLKPD----IAYTINYGQ---IPASREIYVSRYICNL-------LR 53
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
H + + L + I + + P RN + + AA A + I +
Sbjct: 54 IQHKVIEVNCKSLGSGILINEERLDISPSQ---EWWPYRNQLLITLAAMQAIKDKIGVLH 110
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
+ ++D S + D I + E ++++ +E K ++
Sbjct: 111 LASVKSD-SFHKDGTPQFYDLINELVKY-QEGNISIVCESTGYYSHELVKK------YNV 162
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
I+ +H+C + C CP C
Sbjct: 163 PLEIIAFAHSC--------HISNTACGQCPGCK 187
>gi|284998063|ref|YP_003419830.1| ExsB family protein [Sulfolobus islandicus L.D.8.5]
gi|284445958|gb|ADB87460.1| ExsB family protein [Sulfolobus islandicus L.D.8.5]
Length = 244
Score = 75.3 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 51/234 (21%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKIVEL 63
A++ +GG DS+ + D+ + YG Q ELE + +K+
Sbjct: 1 MVEEAIIQLTGGIDSTVLAYYLKDK-YVLHGTFIYYGYPPQ--LRELELVKELSRKLD-- 55
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+PL I+ S+ + + FV + A+ +
Sbjct: 56 -------------IPLKIIDFSSYIKSFDLPPIDSIQYIIKYQFV-------IEILASFS 95
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ +++G + ++S + ++ IE+ + V P + K E KL
Sbjct: 96 AYPNLNTMLVGWLKDEWS----NKMSILKGIESLM------GFKVIAPFHAMVKSEVIKL 145
Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++G + ++H+C C C C R++ + E K K
Sbjct: 146 GNELG------VDFTKTHSC-------IVSGKMHCGICMPCRSRRRAFEEAKVK 186
>gi|301155019|emb|CBW14482.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 66
Score = 75.3 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELE 51
I++ AL++FSGGQDS+TCL + F + VE ++F YGQR+ +ELE
Sbjct: 3 IQQNKKALVIFSGGQDSTTCLFQVIAEFGKENVEVVTFQYGQRHAIELE 51
>gi|148994989|ref|ZP_01823967.1| hypothetical protein CGSSp9BS68_00402 [Streptococcus pneumoniae
SP9-BS68]
gi|147926926|gb|EDK77973.1| hypothetical protein CGSSp9BS68_00402 [Streptococcus pneumoniae
SP9-BS68]
Length = 48
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK 47
K SAL++FSGGQDS+TCL W + ++ VE ++F YGQR+
Sbjct: 2 KRQSALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHH 42
>gi|10945090|emb|CAC14206.1| hypothetical protein [Pseudomonas syringae pv. phaseolicola]
gi|10945095|emb|CAC14209.1| hypothetical protein [Pseudomonas syringae pv. phaseolicola]
Length = 81
Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 12/78 (15%)
Query: 155 ETAINLGMESH-VTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYE 213
A G+E T+ PL L K + K +G + + +CY
Sbjct: 3 NLATKAGVEGQGFTIRAPLQNLSKSDIVKAGAALG------VDYSLTVSCYQADDQ---- 52
Query: 214 WGYGCNSCPACYLRQKGW 231
G C C +C LR +G+
Sbjct: 53 -GRACGKCDSCRLRTEGF 69
>gi|269964052|ref|ZP_06178357.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831193|gb|EEZ85347.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 73
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
MWL K ETW LA D + L+ E + TCY G G GC CP+C LR+ G
Sbjct: 1 MWLNKAETWALADQY---DALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLD 51
Query: 233 EFKEK 237
++
Sbjct: 52 DYLNN 56
>gi|158314657|ref|YP_001507165.1| ExsB family protein [Frankia sp. EAN1pec]
gi|158110062|gb|ABW12259.1| ExsB family protein [Frankia sp. EAN1pec]
Length = 372
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 72/218 (33%), Gaps = 48/218 (22%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+LLFS G DS A + L FD G R + + I L+ + +
Sbjct: 132 VLLFSAGLDS----FPAWHYLGKPPALYFDLGHRYRDQERAA------ITALVDRCGIKV 181
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
L L+ D+ + +P RN+ + AA A R+
Sbjct: 182 TVSQELDLSQW---------------EADDAI----IPLRNVYLAMLAANRAERIWC--- 219
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET--WKLAQDIGG 189
+GV + D + D I I V + +P + K E W L Q +
Sbjct: 220 -VGV-KGDATA--DKSPQAFHQISQMITDLSGRPVWLDSPFWQMTKTEIVAWYLGQGLPA 275
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
DL+ + +C + C CP+C R
Sbjct: 276 GDLL-----LTFSC-----SRTDSAMTHCGQCPSCLRR 303
>gi|289810346|ref|ZP_06540975.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 56
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 163 ESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCP 222
+ TPLMW+ K ETW LA G ++L+ EE+ TCY G + G GC C
Sbjct: 1 AKDIRFETPLMWIDKAETWALADYWGQ---LDLVREETLTCYNGIK------GDGCGHCA 51
Query: 223 ACYLR 227
AC LR
Sbjct: 52 ACNLR 56
>gi|261405633|ref|YP_003241874.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
sp. Y412MC10]
gi|261282096|gb|ACX64067.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
sp. Y412MC10]
Length = 412
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS A+ R +E + F Y +L ++K++EL
Sbjct: 174 PLGTNGKAMLLLSGGIDSPVAGWSAMRRGLEIECVHF-YSFPYTSQL-----AKEKVMEL 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
G+ + + + + + I +NL TF R L A++LA
Sbjct: 228 TRLLSGYTGKIKL-------HLVPFTDVQTSFVGIGQDNLIITF--MRRA-MLRIASSLA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G IV G D G + + + +G + + + PL+ + K + +
Sbjct: 278 EREGALAIVTG----DSLG-----QVASQTLPSMNVIGRATELPLLRPLVMMDKNDIINI 328
Query: 184 AQDIGGQDLVNLILEES 200
A DIG D L E+
Sbjct: 329 AMDIGTFDTSILPYEDC 345
>gi|253576098|ref|ZP_04853430.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
sp. oral taxon 786 str. D14]
gi|251844441|gb|EES72457.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
sp. oral taxon 786 str. D14]
Length = 410
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 71/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS AL R +E + F + +K+++L
Sbjct: 174 PLGSNGKAMLLLSGGIDSPVAGWSALRRGLEIECVHF-----HSYPFTS-KKAEQKVIDL 227
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G + H++P + + N+ + + L A
Sbjct: 228 ANVLAQYSGFIKLHLVPFTEIQTKLAQTGQDNLIITMMRRA------------MLRIATK 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA R G +V G D G + + + +G +++ + PL+ K +
Sbjct: 276 LAERNGALALVTG----DSLG-----QVASQTLSSMNAIGRVTNLPILRPLVMTDKVDII 326
Query: 182 KLAQDIGGQDLVNLILEES 200
+AQ IG DL L E+
Sbjct: 327 AMAQQIGTYDLSILPYEDC 345
>gi|315645999|ref|ZP_07899120.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
vortex V453]
gi|315278760|gb|EFU42074.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
vortex V453]
Length = 412
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS A+ R +E + F Y +L ++K++EL
Sbjct: 174 PLGTNGKAMLLLSGGIDSPVAGWSAMRRGLEIECVHF-YSFPYTSQL-----AKEKVMEL 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
G+ + + + + + I +NL TF R L A++LA
Sbjct: 228 TRLLSGYTGKIKL-------HLVPFTDVQTSFVGIGQDNLIITF--MRRA-MLRIASSLA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G IV G D G + + + +G + + + PL+ + K + +
Sbjct: 278 EREGALAIVTG----DSLG-----QVASQTLPSMNVIGRATELPLLRPLVMMDKNDIINI 328
Query: 184 AQDIGGQDLVNLILEES 200
A DIG + L E+
Sbjct: 329 AMDIGTFETSILPYEDC 345
>gi|315231182|ref|YP_004071618.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
MP]
gi|315184210|gb|ADT84395.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
MP]
Length = 365
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 69/199 (34%), Gaps = 33/199 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK----K 59
+ + L SGG DS + R + + FD G+ + +E + + +
Sbjct: 161 PVSTQGKVVALLSGGIDSPVAAFLMMKRGAEIIAVHFDQGKNARKVVEKTVNILNDYSPR 220
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+EL+ + + + +++ L L + + +A L A
Sbjct: 221 DIELIIENHFEVLKPYVVALNRLNMREWTCVVCKIA-------------------MLRRA 261
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A +A G IV G D G + + M +H PL+ + K E
Sbjct: 262 AEIAKEKGALGIVTG----DSLG-----QVASQTLTNLYFETMSVRFPIHRPLLGMDKEE 312
Query: 180 TWKLAQDIGG-QDLVNLIL 197
++A++IG Q +
Sbjct: 313 IIRIAREIGTYQAFLEYPY 331
>gi|329925847|ref|ZP_08280576.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
sp. HGF5]
gi|328939593|gb|EGG35941.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
sp. HGF5]
Length = 412
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS A+ R +E + F Y +L ++K++EL
Sbjct: 174 PLGTNGKAMLLLSGGIDSPVAGWSAMRRGLELECVHF-YSFPYTSQL-----AKEKVMEL 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
G+ + + + + + I +NL TF R L A++LA
Sbjct: 228 TRLLSGYTGKIKL-------HLVPFTDVQTSFVGIGQDNLIITF--MRRA-MLRIASSLA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G IV G D G + + + +G + + + PL+ + K + +
Sbjct: 278 EREGALAIVTG----DSLG-----QVASQTLPSMNVIGRATELPLLRPLVMMDKNDIINI 328
Query: 184 AQDIGGQDLVNLILEES 200
A DIG D L E+
Sbjct: 329 AMDIGTFDTSILPYEDC 345
>gi|258511246|ref|YP_003184680.1| thiamine biosynthesis/tRNA modification protein ThiI
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257477972|gb|ACV58291.1| thiamine biosynthesis/tRNA modification protein ThiI
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 400
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 75/201 (37%), Gaps = 29/201 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ + L+L SGG DS A+ R +E + F + +K +
Sbjct: 173 PVGMSGKGLVLLSGGIDSPVAAWKAMKRGLALELVHF-----HSFPFTSERAQQKVEDLA 227
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ KW + + AI +I S+ + ++ + + A+
Sbjct: 228 AILTKWGGPMKLHLVSVTAIQAEIQRSAPEGLRTILLRR-------------MMVRAASR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A +G +V G + T+ A+ A++ + T+ PL+ K E
Sbjct: 275 IADEVGAGALVTGDSLGQVAS------QTLSALN-AVDRATDH--TILRPLIAEDKLEII 325
Query: 182 KLAQDIGGQDLVNLILEESHT 202
+LA+ +G D+ L ++ +
Sbjct: 326 ELAKRMGTYDISILPFDDCCS 346
>gi|212224002|ref|YP_002307238.1| Hypothetical thiI [Thermococcus onnurineus NA1]
gi|212008959|gb|ACJ16341.1| Hypothetical thiI [Thermococcus onnurineus NA1]
Length = 363
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 69/193 (35%), Gaps = 33/193 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK----KIVELMP 65
++L SGG DS + R + + FD G+ K +E + + K +EL+
Sbjct: 167 KVVVLLSGGIDSPVAAFLMMKRGAEIIAVHFDQGKNAKNVVEKTVEILNDYSPKDIELIV 226
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + ++ L+ + + + + VA L AA +A
Sbjct: 227 ENHFEVLRPYVAVLSRINMLEWTCVLCKVA-------------------MLRRAAEIARE 267
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G IV G D G + + M VH PL+ + K E K+A+
Sbjct: 268 EGALGIVTG----DSLG-----QVASQTLANLYFETMSVRFPVHRPLLGMDKEEIVKIAR 318
Query: 186 DIGG-QDLVNLIL 197
+IG Q +
Sbjct: 319 EIGTYQAFLEYPY 331
>gi|218289884|ref|ZP_03494074.1| thiamine biosynthesis/tRNA modification protein ThiI
[Alicyclobacillus acidocaldarius LAA1]
gi|218240024|gb|EED07210.1| thiamine biosynthesis/tRNA modification protein ThiI
[Alicyclobacillus acidocaldarius LAA1]
Length = 400
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 75/201 (37%), Gaps = 29/201 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ + L+L SGG DS A+ R +E + F + +K +
Sbjct: 173 PVGMSGKGLVLLSGGIDSPVAAWKAMKRGLALELVHF-----HSFPFTSERAQQKVEDLA 227
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ KW + + AI +I S+ + ++ + + A+
Sbjct: 228 AILTKWGGPMKLHLVSVTAIQAEIQRSAPEGLRTILLRR-------------MMVRAASR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A +G +V G + T+ A+ A++ + T+ PL+ K E
Sbjct: 275 IADEVGAGALVTGDSLGQVAS------QTLSALN-AVDRATDH--TILRPLIAEDKLEII 325
Query: 182 KLAQDIGGQDLVNLILEESHT 202
+LA+ +G D+ L ++ +
Sbjct: 326 ELAKRMGTYDISILPFDDCCS 346
>gi|302528752|ref|ZP_07281094.1| predicted protein [Streptomyces sp. AA4]
gi|302437647|gb|EFL09463.1| predicted protein [Streptomyces sp. AA4]
Length = 448
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 80/234 (34%), Gaps = 45/234 (19%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+LFSGG DSS L+ L + +S R ++ V+++++ +
Sbjct: 143 VLFSGGLDSSAGLALRLG-GPPLLPVSV----RTNNDM---AGVQERVLSRLRGVSRE-- 192
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+LP A S T+ Q+N+ + R ++FL +A LG +
Sbjct: 193 ---VLPAASFRVNLTESRTR-APGAKQENSQRS-----RGLLFLAAGIAVAITLGKGRLW 243
Query: 133 -----IGVCETDY-----------SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
IG Y S +P T++A+ V TPL+ L
Sbjct: 244 FLENGIGAINLPYLRSQVGSQATRSAHP----RTVQAMARLAGTLTGQDFAVETPLLGLT 299
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
K E + S +C R C +C +C LR++
Sbjct: 300 KAEAVS-----AVPPEYEHAIACSVSC-DTGFASRISGHPPCGTCTSCLLRRQA 347
>gi|308069907|ref|YP_003871512.1| thiamine biosynthesis protein thiI [Paenibacillus polymyxa E681]
gi|305859186|gb|ADM70974.1| Probable thiamine biosynthesis protein thiI [Paenibacillus polymyxa
E681]
Length = 408
Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 74/198 (37%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVE 62
+ A+LL SGG DS ++ R +E + F Y ++ E + + K +
Sbjct: 174 PLGTNGKAILLLSGGIDSPVAGWSSMRRGLEIECVHFYSYPFTSERAKEKVIELAKVLAG 233
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ K H++P + + N+ + + + L A L
Sbjct: 234 YAGRIKI-----HLVPFTEVQTAFTRTGQDNLIITLMRRS------------MLRIATML 276
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A R G +V G D G + + + +G + + + PL+ + K E +
Sbjct: 277 AEREGALALVTG----DSLG-----QVASQTLSSMNVIGRSTELPLLRPLVMMDKQEITE 327
Query: 183 LAQDIGGQDLVNLILEES 200
+A+ IG DL L E+
Sbjct: 328 IAKQIGTYDLSILPYEDC 345
>gi|269928591|ref|YP_003320912.1| thiamine biosynthesis/tRNA modification protein ThiI [Sphaerobacter
thermophilus DSM 20745]
gi|269787948|gb|ACZ40090.1| thiamine biosynthesis/tRNA modification protein ThiI [Sphaerobacter
thermophilus DSM 20745]
Length = 404
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 25/187 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++L SGG DS + + R V L VR +E + +
Sbjct: 181 RVVVLMSGGFDSPVAVYRMMKRGCEVTLLH----------CHAYPFVRSTSIEKVVELAQ 230
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
LG ++ I + +A + + V R + + A +A R G
Sbjct: 231 HLGRHQPGMRLVIVPIGQAQRQIAIATEPE-----IRVVLYR-RLMMRIAEAIAEREGAK 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G S + ++ +G + + PL+ K E A+ IG
Sbjct: 285 AIVTGESLGQVSS---------QTLDNLRAIGAAVKLPILRPLIGFDKEEILAEAKRIGT 335
Query: 190 QDLVNLI 196
+ + +
Sbjct: 336 EPISRVP 342
>gi|18978207|ref|NP_579564.1| hypothetical protein PF1835 [Pyrococcus furiosus DSM 3638]
gi|18894018|gb|AAL81959.1| putative thiamin biosynthesis protein thiI [Pyrococcus furiosus DSM
3638]
Length = 201
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 23/183 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L S G DS + R V L F Q E + R V+K L +
Sbjct: 2 KVVALLSSGIDSPVAIHLMASRGVEVYPLHFR--QDEVKERKVRKVVKK----LQEIHGE 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + H + + +I+ F + A + A ++G +
Sbjct: 56 KVKDPHTV-----NAYEVQAPVFEKLKEIKKGKWTCVFCKY---TMYIVAESYAKKVGAS 107
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I+ G D G + ++ + + + + V PL+ L K E K+A++IG
Sbjct: 108 AIITG----DSLG-----QVASQTLDNLLVISTATKLPVIRPLIGLDKEEIVKIAKEIGT 158
Query: 190 QDL 192
++
Sbjct: 159 FEI 161
>gi|310643015|ref|YP_003947773.1| tRNA sulfurtransferase [Paenibacillus polymyxa SC2]
gi|309247965|gb|ADO57532.1| Probable tRNA sulfurtransferase [Paenibacillus polymyxa SC2]
Length = 408
Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 74/198 (37%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVE 62
+ A+LL SGG DS ++ R +E + F Y ++ E + + K +
Sbjct: 174 PLGTNGKAMLLLSGGIDSPVAGWSSMRRGLEIECVHFYSYPFTSERAKEKVIDLAKVLAG 233
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ K H++P + + N+ + + + L A L
Sbjct: 234 YAGRIKI-----HLVPFTEVQTAFTRTGQDNLIITLMRRS------------MLRIATML 276
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A R G +V G D G + + + +G + + + PL+ + K E +
Sbjct: 277 AEREGALALVTG----DSLG-----QVASQTLSSMNVIGRSTELPLLRPLVMMDKQEITE 327
Query: 183 LAQDIGGQDLVNLILEES 200
+A+ IG DL L E+
Sbjct: 328 IAKQIGTYDLSILPYEDC 345
>gi|57640301|ref|YP_182779.1| hypothetical protein TK0366 [Thermococcus kodakarensis KOD1]
gi|57158625|dbj|BAD84555.1| ThiI-related protein [Thermococcus kodakarensis KOD1]
Length = 191
Score = 65.6 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 68/185 (36%), Gaps = 29/185 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKW 67
A+ L S G DS + L R + + F Q + E + V K+ +L
Sbjct: 2 KAVALLSSGIDSPVAIYLMLRRGVEITPIHFR--QDSIKEEKASEIVEILKRYGKLSDPI 59
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ E+H+ L ++ T + + L A + + +G
Sbjct: 60 IVNFSEEHVPAFEKLRELGKIKYTCVLCK----------------WLMLRKACRIGHEIG 103
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ I+ G D G + ++ + + S + + PL+ L K E ++A++I
Sbjct: 104 ASAIITG----DSLG-----QVASQTLDNLMVVSTASDLPILRPLIGLDKEEIVRIAKEI 154
Query: 188 GGQDL 192
G ++
Sbjct: 155 GTFEI 159
>gi|167464972|ref|ZP_02330061.1| Thiamine biosynthesis [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383691|ref|ZP_08057442.1| ThiI-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321151903|gb|EFX44846.1| ThiI-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 402
Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 73/199 (36%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +LL SGG DS A+ R +E + F + ++K++EL
Sbjct: 175 PLGMSGKGMLLLSGGIDSPVAGWMAMRRGLEIEAVHF-----HSYPYTSE-RAKQKVIEL 228
Query: 64 MPKWK--DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + H++P + H +N+ + I + R A
Sbjct: 229 ARILSRYGGIIKLHLVPFTEIQTRIHQEYRENLLITIYRRCM------YR------IAEK 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA + +V G + T+ ++ +G + + PL+ L K E
Sbjct: 277 LAEKRKALALVTGESLGQVAS------QTLTSMNV---IGRVVEMPIIQPLVTLDKKEIV 327
Query: 182 KLAQDIGGQDLVNLILEES 200
K+AQ+IG + L E+
Sbjct: 328 KVAQEIGTFETSILPYEDC 346
>gi|218281546|ref|ZP_03487975.1| hypothetical protein EUBIFOR_00540 [Eubacterium biforme DSM 3989]
gi|218217335|gb|EEC90873.1| hypothetical protein EUBIFOR_00540 [Eubacterium biforme DSM 3989]
Length = 396
Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 35/196 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPK 66
A++L SGG DS + R +E + + Y +N E K++EL
Sbjct: 178 KAMVLLSGGIDSPVACYLMMKRGVHIECIHYASPPYTSQNAQE---------KVMELARL 228
Query: 67 WKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
G+ H++P L + + ++ A+ + + + A LA
Sbjct: 229 VSGYQGDVLVHVVPFTDLQLAIYQNADESYAITLMRR------------MMMRIATGLAQ 276
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ I G + + +E+ + + +++ + P++ + K E L+
Sbjct: 277 KRHAQAIATGESIGQVAS---------QTLESMLAINDVTNMPIIRPVVCMDKVEIIDLS 327
Query: 185 QDIGGQDLVNLILEES 200
+ IG + L E+
Sbjct: 328 KKIGTYETSILPYEDC 343
>gi|295099739|emb|CBK88828.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
cylindroides T2-87]
Length = 399
Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A++L SGG DS + R +E + + + K++EL +
Sbjct: 178 KAMVLLSGGIDSPVASYLMMKRGTHIECIHY------ASPPYTSQNAQDKVMELAQQICG 231
Query: 70 SLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G+ H++P L + + D + T R ++ A LA +
Sbjct: 232 YQGDLLVHVVPFTNL---------QLAIYQHADESYAITL--MRRMMM-RIATGLAEKRH 279
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +E+ + + + P++ + K E LA+ I
Sbjct: 280 AQAIATGESIGQVAS---------QTLESMQAINEVTSTPIIRPVVCMDKVEIIDLAKKI 330
Query: 188 GGQDLVNLILEES 200
G + L E+
Sbjct: 331 GTYETSILPYEDC 343
>gi|117676187|ref|YP_863763.1| hypothetical protein Shewana3_4248 [Shewanella sp. ANA-3]
gi|117615011|gb|ABK50464.1| conserved hypothetical protein [Shewanella sp. ANA-3]
Length = 434
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 79/224 (35%), Gaps = 25/224 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQR-NKVELECRLCVRKKIVELMPKWK 68
++ LFSGG DS+ + L +S Y G + ++ ++ L + E+
Sbjct: 150 SVCLFSGGLDSAIGVIDLLKEGRSPLLVSHAYKGDKTHQDQIASALNGQYSRFEVNADPH 209
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
GE I + L ++ +++ + + N + FVP N F+ A L R
Sbjct: 210 LYTGETDITMRTRSLNFLAFAAVGASAVKTVSQQNEIDLFVPE-NG-FISLNAPLTPRR- 266
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IG T + I +I+ I E + + K + +
Sbjct: 267 -----IGTLSTRTTH-----PHFIESIQR-IFEAAEIPCRIVNRYQFKTKGQMVT---EC 312
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ L+ I++ + +C W C C C +R+
Sbjct: 313 QNKLLLAKIVDNTVSC-----SHWKRWNQQCGVCVPCIIRRAAL 351
>gi|251797907|ref|YP_003012638.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
sp. JDR-2]
gi|247545533|gb|ACT02552.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
sp. JDR-2]
Length = 406
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 24/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+LL SGG DS A+ + +E + F + ++K+++L +
Sbjct: 176 SNGKAMLLLSGGIDSPVAGWMAMRKGLELEAVHF-----HSYPFTS-DKAKEKVIDLARR 229
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
G L L DI + ++ + +++ T R L LA R
Sbjct: 230 LSYYAGAPLKLHLVPFTDI------QTRLVQAKQDSMMITL--MRRA-MLRITEQLADRN 280
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G IV G + T+ ++ +G + + + PL+ + K E A
Sbjct: 281 GAGGIVTGESLGQVAS------QTLSSMNV---IGRATVLPLLKPLIMMDKQEIINEAVR 331
Query: 187 IGGQDLVNLILEES 200
IG + L E+
Sbjct: 332 IGTFETSILPYEDC 345
>gi|116333864|ref|YP_795391.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus brevis
ATCC 367]
gi|122269449|sp|Q03R12|THII_LACBA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|116099211|gb|ABJ64360.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus brevis
ATCC 367]
Length = 405
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 70/191 (36%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++ SGG DS + + R +++ + F E L K++ + +
Sbjct: 179 KAVMMLSGGIDSPVAAYYGMRRGVKLDMVHFFSPPYTS---EQALAKAKELTARLAGYSG 235
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
S+ + P + + + + M IQ + L AA +A R
Sbjct: 236 SIQFIQV-PFTKIQETIKEKVPEGYLMTIQRR------------LMLRLAAAVAERRHAK 282
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I G + + +E+ + + + + PL+ + K E K+A++I
Sbjct: 283 GIFNGESLGQVAS---------QTLESMAAINDVTSMPILRPLLSMDKTEIIKVAENIDT 333
Query: 190 QDLVNLILEES 200
DL L E+
Sbjct: 334 YDLSILPYEDC 344
>gi|329766926|ref|ZP_08258454.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
haemolysans M341]
gi|328837651|gb|EGF87276.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
haemolysans M341]
Length = 416
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 75/199 (37%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + ALLL SGG DS + VE + F E +KI +L
Sbjct: 174 PVNTSSKALLLLSGGIDSPVAAHTLQVKGVEVEMIHFQSPPFTSAE------ALQKIFDL 227
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K + +G+ H++ L T+ V + + +T R L A
Sbjct: 228 TIKLSEVVGKIKLHVVNFTKL-------QTEIVKRVPSNYTMTST----R-RFMLRIAEE 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + G I G + T+ ++ + +++ + PL+ + K +
Sbjct: 276 VAKKEGCLAIATGESLGQVAS------QTLESMN---CINEVTNLPILRPLLTMDKVDII 326
Query: 182 KLAQDIGGQDLVNLILEES 200
K+AQ+I ++ NL E+
Sbjct: 327 KIAQEIETLEISNLPFEDC 345
>gi|329769610|ref|ZP_08261014.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
sanguinis M325]
gi|328838365|gb|EGF87974.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
sanguinis M325]
Length = 413
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + ALLL SGG DS + VE + F E +KI +L
Sbjct: 174 PVNTSSKALLLLSGGIDSPVAAHALQVKGVEVEMIHFQSPPFTSQE------ALQKIFDL 227
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K + +G+ H++ L T+ V + + +T R L A
Sbjct: 228 TIKLSEVVGKIKLHVVNFTKL-------QTEIVKRIPSNYTMTST----R-RFMLRIAEE 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+AY+ G I G + T+ ++ + +++ V PL+ + K +
Sbjct: 276 VAYKEGCLAIATGESLGQVAS------QTLESMN---CINEVTNLPVLRPLLTMDKVDII 326
Query: 182 KLAQDIGGQDLVNLILEES 200
K+AQDI ++ NL E+
Sbjct: 327 KIAQDIDTLEISNLPFEDC 345
>gi|317495293|ref|ZP_07953663.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
moribillum M424]
gi|316914715|gb|EFV36191.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
moribillum M424]
Length = 416
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + ALLL SGG DS + VE + F + +KI +L
Sbjct: 174 PVNTSSKALLLLSGGIDSPVAAHMLQVKGVEVEMVHF------QSPPFTSADALQKIFDL 227
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K + +G+ H++ L T+ V + + +T R L A
Sbjct: 228 TIKLSEVVGKIKLHVVNFTKL-------QTEIVKCVPSNYTMTST----R-RFMLRIAEE 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G + G + T+ ++ + +++ + PL+ + K +
Sbjct: 276 VAKREGCLALATGESLGQVAS------QTLESMN---CINNVTNMPILRPLLSMDKVDII 326
Query: 182 KLAQDIGGQDLVNLILEES 200
K+A+DI ++ NL E+
Sbjct: 327 KIAKDIETLEISNLPFEDC 345
>gi|14520567|ref|NP_126042.1| hypothetical protein PAB0226 [Pyrococcus abyssi GE5]
gi|5457783|emb|CAB49273.1| thiI thiamin biosynthesis protein thiI [Pyrococcus abyssi GE5]
Length = 198
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 23/183 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L S G DS + + V L F Q + E VR+ + L D
Sbjct: 2 KVVALLSSGIDSPVAIHLVASKGAEVYPLHFK--QDDVKE----NKVRRIVKRLQEIHGD 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I+ + L + K T + A + A +
Sbjct: 56 KVKDPRIVDAFEVQGPVFEKLREIRKEKWTCIFCKYT--------MYIVATSYAREIKAK 107
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G D G + ++ + + + + + PL+ L K E ++A++IG
Sbjct: 108 AIVTG----DSLG-----QVASQTLDNLMVMSTATELPILRPLIALDKEEIVRIAKEIGT 158
Query: 190 QDL 192
D+
Sbjct: 159 FDI 161
>gi|303239948|ref|ZP_07326470.1| thiamine biosynthesis/tRNA modification protein ThiI [Acetivibrio
cellulolyticus CD2]
gi|302592427|gb|EFL62153.1| thiamine biosynthesis/tRNA modification protein ThiI [Acetivibrio
cellulolyticus CD2]
Length = 392
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I A+LL SGG DS R +E + F Y E + ++ ++
Sbjct: 175 PIGTNGKAVLLLSGGIDSPVAGWMIAKRGVELEAVHF-YSYPYTSERAKEKVI--ELTKI 231
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + +++ + I +I+ + + ++ + + A +A
Sbjct: 232 LTLYCNNIKLHIVPFTDIQLEINEKCPQDQLTIIMRR-------------VMMTIAERIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++G +V G + + I++ + V PL+ + K E +
Sbjct: 279 EKVGALALVTGESVGQVAS---------QTIQSLYVTNSVVKMPVFRPLIGMDKNEVIDI 329
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 330 ARKIGTFETSILPYEDC 346
>gi|221635827|ref|YP_002523703.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermomicrobium roseum DSM 5159]
gi|221157653|gb|ACM06771.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermomicrobium roseum DSM 5159]
Length = 407
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 26/188 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
+ L SGG DS + R V + F Y + +E + + + + P
Sbjct: 182 RVVALLSGGFDSPVAAYRLMKRGCFVTFVHFHAYPYVRPISIEKAVELARHLSRFQPPKN 241
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ ++P+ + + ++ V R + L A +A+ G
Sbjct: 242 RLI----VVPIGDAQRVIALAAEPSLR-----------VVLYR-RLMLRIATAIAHEEGA 285
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+V G + + +E +G + + + PL+ K E A IG
Sbjct: 286 GALVTGESLGQVAS---------QTLENMRAIGAVTDLPLLRPLVGNNKDEIIAEAVRIG 336
Query: 189 GQDLVNLI 196
+ + +
Sbjct: 337 TEPISRVP 344
>gi|302531818|ref|ZP_07284160.1| ExsB family protein [Streptomyces sp. AA4]
gi|302440713|gb|EFL12529.1| ExsB family protein [Streptomyces sp. AA4]
Length = 237
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 71/218 (32%), Gaps = 48/218 (22%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+LLFS G DS A L FD G R + + +
Sbjct: 9 VLLFSAGLDS----YPAWHYLGCPPGLYFDLGHRYASQERAAIAALADAAGI-------- 56
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
++ S + A + +D + P RN+ + AA A +
Sbjct: 57 ------------EVEISEELRLGAWEAEDAII-----PLRNVHLAMLAANRAEVVWC--- 96
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET--WKLAQDIGG 189
IGV + D++ D + + I E V V +P + K E W LAQ +
Sbjct: 97 -IGV-KGDHTL--DKSREAFADMGRFIARFSEQPVRVDSPFWNMTKTEIIAWYLAQGLPV 152
Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
L+ + +C + C CP+C R
Sbjct: 153 DHLL-----LTFSC-----SRTDGSTTHCGRCPSCLRR 180
>gi|227510167|ref|ZP_03940216.1| thiamine-phosphate kinase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190372|gb|EEI70439.1| thiamine-phosphate kinase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 405
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A ++ SGG DS A+ R +++ + F Y E L K++ ++ K+
Sbjct: 179 RATMMLSGGIDSPVATYLAMKRGVKIDMIHF-YSPPYTSE--QALNKAKQLTSILAKYSG 235
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
++ + + + + + K+ + L R + L AA +
Sbjct: 236 NI---------QFIQVPFTEVQETIKEKVPEGYLMTI---QRRM-MLRIAAEITKSRHCG 282
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G + + +E+ + + + + V PL+ + K E K+++ IG
Sbjct: 283 GVFTGESLGQVAS---------QTLESMLAINDVTSMPVLRPLVSMDKTEIIKISKQIGT 333
Query: 190 QDLVNLILEES 200
DL L E+
Sbjct: 334 YDLSILPYEDC 344
>gi|227524310|ref|ZP_03954359.1| thiamine-phosphate kinase [Lactobacillus hilgardii ATCC 8290]
gi|227088541|gb|EEI23853.1| thiamine-phosphate kinase [Lactobacillus hilgardii ATCC 8290]
Length = 405
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A ++ SGG DS A+ R +++ + F Y E L K++ ++ K+
Sbjct: 179 RATMMLSGGIDSPVATYLAMKRGVKIDMIHF-YSPPYTSE--QALNKAKQLTSILAKYSG 235
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
++ + + + + + K+ + L R + L AA +
Sbjct: 236 NI---------QFIQVPFTEVQETIKEKVPEGYLMTI---QRRM-MLRIAAEITKSRHCG 282
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G + + +E+ + + + + V PL+ + K E K+++ IG
Sbjct: 283 GVFTGESLGQVAS---------QTLESMLAINDVTSMPVLRPLVSMDKTEIIKISKQIGT 333
Query: 190 QDLVNLILEES 200
DL L E+
Sbjct: 334 YDLSILPYEDC 344
>gi|227513095|ref|ZP_03943144.1| thiamine-phosphate kinase [Lactobacillus buchneri ATCC 11577]
gi|227083670|gb|EEI18982.1| thiamine-phosphate kinase [Lactobacillus buchneri ATCC 11577]
Length = 405
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A ++ SGG DS A+ R +++ + F Y E L K++ ++ K+
Sbjct: 179 RATMMLSGGIDSPVATYLAMKRGVKIDMIHF-YSPPYTSE--QALNKAKQLTSILAKYSG 235
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
++ + + + + + K+ + L R + L AA +
Sbjct: 236 NI---------QFIQVPFTEVQETIKEKVPEGYLMTI---QRRM-MLRIAAEITKSRHCG 282
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ G + + +E+ + + + + V PL+ + K E K+++ IG
Sbjct: 283 GVFTGESLGQVAS---------QTLESMLAINDVTSMPVLRPLVSMDKTEIIKISKQIGT 333
Query: 190 QDLVNLILEES 200
DL L E+
Sbjct: 334 YDLSILPYEDC 344
>gi|302390017|ref|YP_003825838.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermosediminibacter oceani DSM 16646]
gi|302200645|gb|ADL08215.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermosediminibacter oceani DSM 16646]
Length = 389
Score = 61.8 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 68/195 (34%), Gaps = 29/195 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
A+LL SGG DS + R +E + F + K ++ ++ +
Sbjct: 176 KAVLLLSGGIDSPVAGYMVMKRGVEIEPVYF-----HSFPFTSDRAKEKVVELCRVLSGY 230
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + +L ++ + + + ++ + + + +A ++G
Sbjct: 231 SGKIRLHVVNFTDVLKELGEKGPNELLTILMRR-------------MMVRISQEIAKKIG 277
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G + + +E + + + V+ PL+ K E +LA+ I
Sbjct: 278 AKALVTGESIGQVAS---------QTMEALMATNEVAELPVYRPLIGFDKVEIIELAKRI 328
Query: 188 GGQDLVNLILEESHT 202
G D+ + +
Sbjct: 329 GTYDISIEPYADCCS 343
>gi|11498485|ref|NP_069713.1| hypothetical protein AF0879 [Archaeoglobus fulgidus DSM 4304]
gi|3915121|sp|O29382|THII_ARCFU RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|2649723|gb|AAB90361.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 374
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 68/202 (33%), Gaps = 43/202 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SGG DS A+ R V + F + VR+KI L K +
Sbjct: 167 KVVALISGGIDSPVAAFMAMKRGCEVVAVHFFNQTMHS------PKVREKIRMLAEKLAE 220
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAYRLGI 128
G+ + + K V +I + P V R + A +A + G
Sbjct: 221 YQGKIKLYMVPF----------KEVQFEIINRVPPKLRMVVYRRSMM-RMANLIAEKEGC 269
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYET 180
+V G ++ + +++ +++ PL+ + K E
Sbjct: 270 KAVVTG-----------------DSLSQVASQTLDNINVIYSASKLAVLPPLIGMDKEEI 312
Query: 181 WKLAQDIGGQDLVNLILEESHT 202
+A+ I ++ L E+ +
Sbjct: 313 VAIAKRIETYEISILPYEDCCS 334
>gi|241889865|ref|ZP_04777163.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
haemolysans ATCC 10379]
gi|241863487|gb|EER67871.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
haemolysans ATCC 10379]
Length = 416
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 74/199 (37%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + ALLL SGG DS + VE + F E +KI +L
Sbjct: 174 PVNTSSKALLLLSGGIDSPVAAHTLQVKGVEVEMIHFQSPPFTSAE------ALQKIFDL 227
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K +G + H++ L T+ V + + +T R L A
Sbjct: 228 TIKLSQVVGRIKLHVVNFTKL-------QTEIVKRVPSNYTMTST----R-RFMLRIAEE 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + G I G + T+ ++ + +++ V PL+ + K +
Sbjct: 276 VAKKEGCLAIATGESLGQVAS------QTLESMN---CINEVTNLPVLRPLLTMDKVDII 326
Query: 182 KLAQDIGGQDLVNLILEES 200
K+AQ+I ++ NL E+
Sbjct: 327 KIAQEIDTLEISNLPFEDC 345
>gi|218295987|ref|ZP_03496767.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermus
aquaticus Y51MC23]
gi|218243725|gb|EED10253.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermus
aquaticus Y51MC23]
Length = 406
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 60/193 (31%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKW 67
+ L SGG DS + R V + F + L + I E + ++
Sbjct: 175 KVVALLSGGIDSPVAAYRLMRRGAEVVLVHF-----HPFPLLSGASREKARAIAERLARF 229
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + + I + V R L A +A G
Sbjct: 230 QHRVRLHLVPFSEVQRRIILEAPKAYR------------VVLYR-RYMLRLAEAVAKEEG 276
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G D G + +E + + + V PL+ L K E K AQ I
Sbjct: 277 ALALVTG----DSLG-----QVASQTLENLYVVNQAATLPVFRPLIGLDKGEIVKEAQKI 327
Query: 188 GGQDLVNLILEES 200
G + L EE
Sbjct: 328 GTYPISILPDEEC 340
>gi|154496284|ref|ZP_02034980.1| hypothetical protein BACCAP_00571 [Bacteroides capillosus ATCC
29799]
gi|150274367|gb|EDN01444.1| hypothetical protein BACCAP_00571 [Bacteroides capillosus ATCC
29799]
Length = 390
Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 65/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L SGG DS R ++ + F E + ++ ++ L+ W
Sbjct: 180 RAVSLLSGGIDSPVASWMMAKRGLALDMVHFFSYPYTSPEAKDKVI---ELARLITPWCG 236
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L + I ++ S + + ++ + A +AYR+G
Sbjct: 237 RLTVHVVPFTKIQEELRRSCPEELFTILMRR-------------FMMRIACRVAYRVGAG 283
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G + + + G + + P++ + K E ++A+ IG
Sbjct: 284 ALVTGESLGQVAS---------QTMSAMRMTGAVCDLPILRPVVGMDKEEIVRIARKIGT 334
Query: 190 QDLVNLILEES 200
+ L E+
Sbjct: 335 FETSILPYEDC 345
>gi|326202178|ref|ZP_08192048.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
papyrosolvens DSM 2782]
gi|325987973|gb|EGD48799.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
papyrosolvens DSM 2782]
Length = 391
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ALLL SGG DS R +E + F Y E + + + ++
Sbjct: 175 PLGSNGKALLLLSGGIDSPVAGWMMGKRGVEIEAIHF-YSYPYTSERAKQKVI--DLAQI 231
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
M ++ + + I I+ + + + + ++ I + A +A
Sbjct: 232 MAQYCGKIRLHVVPFTEIQLKINDNCPEEQLTIIMRR-------------IMMQIAEKVA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ ++ G + + +++ ++ V PL+ + K E +
Sbjct: 279 AKVNAMALITGESMGQVAS---------QTMQSLYCTDAAVNMPVFRPLIGMDKVEVVDI 329
Query: 184 AQDIGGQDLVNLILEES 200
A+ I D L E+
Sbjct: 330 ARRIDTFDTSVLPYEDC 346
>gi|317129945|ref|YP_004096227.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
cellulosilyticus DSM 2522]
gi|315474893|gb|ADU31496.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
cellulosilyticus DSM 2522]
Length = 402
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I A LL+ SGG DS AL R +E + F + R+K+ +L
Sbjct: 174 PIHTAGKVLLMLSGGIDSPVAGYLALKRGVELEAIHF-----HSPPFTN-DRARQKVEDL 227
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G + HI+P H + + M + L A
Sbjct: 228 TRVLTRFGGHIKLHIIPFTEAQKAIHQQIPDSYEMTVMRR------------FMLRIAEG 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + IV G + + +++ + +++ V PL+ + K E
Sbjct: 276 VAKKKHALAIVNGESLGQVAS---------QTLDSMHTINDVTNLPVLRPLVTMDKLEVI 326
Query: 182 KLAQDIGGQDLVNLILEES 200
++A+ IG +L L E+
Sbjct: 327 EIAKKIGTYELSILPFEDC 345
>gi|296449547|ref|ZP_06891324.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
difficile NAP08]
gi|296878130|ref|ZP_06902145.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
difficile NAP07]
gi|296261611|gb|EFH08429.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
difficile NAP08]
gi|296430883|gb|EFH16715.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
difficile NAP07]
Length = 391
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 62/201 (30%), Gaps = 29/201 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
+ A+ L SGG DS R VE + F + E K +
Sbjct: 175 PLGTNGRAMSLLSGGIDSPVATWMVAKRGMEVEAVHF-----HSYPFTSERSQEKVKDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ K+ + + L I I + + + + + A
Sbjct: 230 KILAKYCGRVRLHKVNILEIQKAIGENCNEEEATILSRR-------------FMMRIAQR 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L+ + ++ G + + I+ + V PL+ + K +
Sbjct: 277 LSEKRHCDALITGESIGQVAS---------QTIQGLTCTNAVVDLPVFRPLIAMDKSDIV 327
Query: 182 KLAQDIGGQDLVNLILEESHT 202
+A+ IG + + E+ +
Sbjct: 328 DIAKKIGTFETSIVPEEDCCS 348
>gi|126698334|ref|YP_001087231.1| thiamine biosynthesis protein ThiI [Clostridium difficile 630]
gi|123363486|sp|Q189U8|THII_CLOD6 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|115249771|emb|CAJ67588.1| Thiamine biosynthesis protein ThiI [Clostridium difficile]
Length = 391
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 62/201 (30%), Gaps = 29/201 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
+ A+ L SGG DS R VE + F + E K +
Sbjct: 175 PLGTNGRAMSLLSGGIDSPVATWMVAKRGMEVEAVHF-----HSYPFTSERSQEKVKDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ K+ + + L I I + + + + + A
Sbjct: 230 KILAKYCGRVRLHKVNILEIQKAIGENCNEEEATILSRR-------------FMMRIAQR 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L+ + ++ G + + I+ + V PL+ + K +
Sbjct: 277 LSEKRHCDALITGESIGQVAS---------QTIQGLTCTNAVVDLPVFRPLIAMDKSDIV 327
Query: 182 KLAQDIGGQDLVNLILEESHT 202
+A+ IG + + E+ +
Sbjct: 328 DIAKKIGTFETSIVPEEDCCS 348
>gi|220916217|ref|YP_002491521.1| PP-loop superfamily ATPase-like protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954071|gb|ACL64455.1| PP-loop superfamily ATPase-like protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 447
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 78/237 (32%), Gaps = 41/237 (17%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
LFSGG DS ++ +S + ++ R +++ + ++ +
Sbjct: 144 LFSGGLDSIVGTYLRSRTAKKLIVVSV-----HG--IQVRASAQQRAITMLQRASFFSVP 196
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
H + + + H+ + R +FL A +A +G + +
Sbjct: 197 LHWV--SFDHQLRHAHPPEKSQR-------------CRGFLFLSIGAAVARTVGASTLHT 241
Query: 134 GVCETDYSGYPDC------------RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
P T+ ++E + + + V + P ++ K E
Sbjct: 242 YENGIGALNPPMNLAQVGAQNTRAMHPGTLASLEGILEVVQDDPVRLEAPFLFSTKGEMC 301
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG-WMEFKEK 237
+ A++ + S++C G+ K C C +C LR+ + +K
Sbjct: 302 RDAREHLIPLA-----QASNSCDEGEHGKPDPA-EHCGLCTSCLLRRSALFAALGDK 352
>gi|254974372|ref|ZP_05270844.1| thiamine biosynthesis protein ThiI [Clostridium difficile
QCD-66c26]
gi|255091766|ref|ZP_05321244.1| thiamine biosynthesis protein ThiI [Clostridium difficile CIP
107932]
gi|255099870|ref|ZP_05328847.1| thiamine biosynthesis protein ThiI [Clostridium difficile
QCD-63q42]
gi|255305758|ref|ZP_05349930.1| thiamine biosynthesis protein ThiI [Clostridium difficile ATCC
43255]
gi|255313496|ref|ZP_05355079.1| thiamine biosynthesis protein ThiI [Clostridium difficile
QCD-76w55]
gi|255516184|ref|ZP_05383860.1| thiamine biosynthesis protein ThiI [Clostridium difficile
QCD-97b34]
gi|255649280|ref|ZP_05396182.1| thiamine biosynthesis protein ThiI [Clostridium difficile
QCD-37x79]
gi|306519380|ref|ZP_07405727.1| thiamine biosynthesis protein ThiI [Clostridium difficile
QCD-32g58]
Length = 390
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 62/201 (30%), Gaps = 29/201 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
+ A+ L SGG DS R VE + F + E K +
Sbjct: 174 PLGTNGRAMSLLSGGIDSPVATWMVAKRGMEVEAVHF-----HSYPFTSERSQEKVKDLA 228
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ K+ + + L I I + + + + + A
Sbjct: 229 KILAKYCGRVRLHKVNILEIQKAIGENCNEEEATILSRR-------------FMMRIAQR 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L+ + ++ G + + I+ + V PL+ + K +
Sbjct: 276 LSEKRHCDALITGESIGQVAS---------QTIQGLTCTNAVVDLPVFRPLIAMDKSDIV 326
Query: 182 KLAQDIGGQDLVNLILEESHT 202
+A+ IG + + E+ +
Sbjct: 327 DIAKKIGTFETSIVPEEDCCS 347
>gi|260682451|ref|YP_003213736.1| thiamine biosynthesis protein ThiI [Clostridium difficile CD196]
gi|260686050|ref|YP_003217183.1| thiamine biosynthesis protein ThiI [Clostridium difficile R20291]
gi|260208614|emb|CBA61338.1| putative thiamine biosynthesis protein [Clostridium difficile
CD196]
gi|260212066|emb|CBE02652.1| putative thiamine biosynthesis protein [Clostridium difficile
R20291]
Length = 391
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 62/201 (30%), Gaps = 29/201 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
+ A+ L SGG DS R VE + F + E K +
Sbjct: 175 PLGTNGRAMSLLSGGIDSPVATWMVAKRGMEVEAVHF-----HSYPFTSERSQEKVKDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ K+ + + L I I + + + + + A
Sbjct: 230 KILAKYCGRVRLHKVNILEIQKAIGENCNEEEATILSRR-------------FMMRIAQR 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L+ + ++ G + + I+ + V PL+ + K +
Sbjct: 277 LSEKRHCDALITGESIGQVAS---------QTIQGLTCTNAVVDLPVFRPLIAMDKSDIV 327
Query: 182 KLAQDIGGQDLVNLILEESHT 202
+A+ IG + + E+ +
Sbjct: 328 DIAKKIGTFETSIVPEEDCCS 348
>gi|332159234|ref|YP_004424513.1| Putative thiamine biosynthesis protein THII [Pyrococcus sp. NA2]
gi|331034697|gb|AEC52509.1| Putative thiamine biosynthesis protein THII [Pyrococcus sp. NA2]
Length = 363
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SGG DS L R V L FD G K +E V + + E P +
Sbjct: 167 KVVALLSGGIDSPVAAFLMLKRGAEVVALHFDQGTNAKAVVE---KVVEILSEYSPDPIE 223
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ E+H L + I I L AA +A +G
Sbjct: 224 LIVENHFEVLKPYVQALTDIKRREWTCVICK------------IAMLKRAAEIAREIGAL 271
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G D G + + + + ++ PL+ K E +A+ IG
Sbjct: 272 GIVTG----DSLG-----QVASQTLSNLYFETVSINFPIYRPLIGFDKEEIVNIAKKIGT 322
Query: 190 -QDLVNLIL 197
+ +
Sbjct: 323 YEAFLEFPY 331
>gi|254450437|ref|ZP_05063874.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198264843|gb|EDY89113.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 611
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 72/241 (29%), Gaps = 52/241 (21%)
Query: 8 APSALLLFSGGQDS-STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P ++L+FSGG DS + L ++R +V +S + +L
Sbjct: 148 EPDSVLMFSGGLDSYAGALEEIIERKHKVALIS----------HFSATKIAPIQRDLQKH 197
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
LG ++ + + + + R+ +F A
Sbjct: 198 MAQKLGPQMLMHFPMRVQLKRGTNAEGTHR-------------ARSFLFAALGMATAIAF 244
Query: 127 GITNI-----------------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
G + V+G T + T++ E ++ + ++ V
Sbjct: 245 GQKRVSFYENGVVSLNLPPVGNVLGTRATRTTH-----PQTLQRFEALFSMIFDQNLRVD 299
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
P W K E + +G D + + +C + + C C C R+
Sbjct: 300 NPFFWRTKTEVVQTIARLGMADQ----IAFTRSC--ADVHNQTKQYAHCGRCSQCVDRRF 353
Query: 230 G 230
Sbjct: 354 A 354
>gi|332652557|ref|ZP_08418302.1| thiamine biosynthesis/tRNA modification protein ThiI
[Ruminococcaceae bacterium D16]
gi|332517703|gb|EGJ47306.1| thiamine biosynthesis/tRNA modification protein ThiI
[Ruminococcaceae bacterium D16]
Length = 390
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L SGG DS R +E + F E + ++ ++ +L+ +
Sbjct: 180 RAVSLLSGGIDSPVASWMIAKRGVALEMVHFFSYPYTSPEAKEKVL---ELAKLLTPYTG 236
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L + AI ++ S + + ++ + + +A R G
Sbjct: 237 RLTVHVVPFTAIQEELRRSCPEELFTVIMRR-------------FMMRISEAVAKRCGAK 283
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G C + + ++ + G + + P + + K E ++A+ IG
Sbjct: 284 ALVTGECLGQVAS---------QTMDAMMVTGSVVDLPILRPCVGMDKEEIVQIARKIGT 334
Query: 190 QDLVNLILEES 200
+ L E+
Sbjct: 335 FETSILPYEDC 345
>gi|304317216|ref|YP_003852361.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778718|gb|ADL69277.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 383
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A++L SGG DS + R +E + F Y Q E +
Sbjct: 167 PLGTNGRAVVLLSGGIDSPVAAWMMMKRGVEIEAVYFHSPPYTQ------ERAKDKVIDL 220
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + ++ + + I K + ++ + + A
Sbjct: 221 CKKLSEYGQDIYLHVVNFTDFQLAIYDKCPPKMTTIIMRR-------------MMMRVAE 267
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + G ++ G + + IE+ +H+ V PL+ + K E
Sbjct: 268 NIANKYGAKALITGESLGQVAS---------QTIESLYCTNEVTHMPVFRPLIGMDKSEI 318
Query: 181 WKLAQDIGGQDLVNLILEES 200
++++ IG D+ E+
Sbjct: 319 VEISKKIGTYDISIRPYEDC 338
>gi|88703765|ref|ZP_01101481.1| conserved hypothetical protein [Congregibacter litoralis KT71]
gi|88702479|gb|EAQ99582.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length = 415
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 77/223 (34%), Gaps = 25/223 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQR-NKVELECRLCVRKKIVELMPKWKD 69
+ LFSGG DS+ L + +S Y G + ++ + L R E+
Sbjct: 132 VSLFSGGLDSAIGAIDLLAQGRTPLLVSHAYKGDKTHQDRIAEALEGRFSRFEVNADPHL 191
Query: 70 SLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
GE I + L ++ +++ + + FVP N F+ A L R
Sbjct: 192 YTGETDITMRTRSLNFLAFAAVGACAVQAVSQEETVDLFVPE-NG-FISLNAPLTPRR-- 247
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IG T + I +I+ + + P + K + Q
Sbjct: 248 ----IGTLSTRTTH-----PHFIESIQNLFG-AVGIPCRIVNPYQFETKGQMATKCQ--- 294
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ L+ I++ + +C KR + C C C +R+
Sbjct: 295 NRQLLADIVDSTVSCSHWKRSNQQ-----CGICVPCIIRRAAL 332
>gi|52081451|ref|YP_080242.1| thiamine biosynthesis protein ThiI [Bacillus licheniformis ATCC
14580]
gi|52786826|ref|YP_092655.1| thiamine biosynthesis protein ThiI [Bacillus licheniformis ATCC
14580]
gi|319647359|ref|ZP_08001581.1| thiamine biosynthesis protein thiI [Bacillus sp. BT1B_CT2]
gi|81384821|sp|Q65G52|THII_BACLD RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|52004662|gb|AAU24604.1| Thiamine biosynthesis protein [Bacillus licheniformis ATCC 14580]
gi|52349328|gb|AAU41962.1| YtbJ [Bacillus licheniformis ATCC 14580]
gi|317390706|gb|EFV71511.1| thiamine biosynthesis protein thiI [Bacillus sp. BT1B_CT2]
Length = 401
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS +A+ R +E + F ++K+++L +
Sbjct: 179 KAMLMISGGIDSPVAGFYAMKRGLEIEAVHFF------SPPYTSERAKQKVIDLTKRLTA 232
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G+ HI+P ++ + +N +M + L A L R
Sbjct: 233 FGGDIKLHIVPFTKTQELIQKQIPENYSMTATRR------------LMLQIADKLRERHN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +E+ + + V PL+ + K E + A++I
Sbjct: 281 ALAIFTGESLGQVAS---------QTLESMYAINAVTSTPVLRPLIGMDKTEIIEKAKEI 331
Query: 188 GGQDLVNLILEES 200
D+ E+
Sbjct: 332 DTYDISIRPYEDC 344
>gi|283769112|ref|ZP_06342017.1| thiamine biosynthesis/tRNA modification protein ThiI [Bulleidia
extructa W1219]
gi|283104298|gb|EFC05676.1| thiamine biosynthesis/tRNA modification protein ThiI [Bulleidia
extructa W1219]
Length = 472
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 66/193 (34%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++L SGG DS + R +VE + F + K+++L D
Sbjct: 177 KVMMLLSGGIDSPVATYQLIKRGLKVEAVHF------AAPPYTSEAAKNKVLKLASMISD 230
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G + H++P L + A+ + + A LA
Sbjct: 231 YQGGMKVHVVPFTELQLDIYRVAKDPYAITLMRR------------MMFRIAEKLAINNR 278
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +E+ + + H+ V PL+ + K E +LA++I
Sbjct: 279 CLAIGTGESLGQVAS---------QTLESMVTINDVVHIPVLRPLVSMDKVEIIQLAREI 329
Query: 188 GGQDLVNLILEES 200
G + L E+
Sbjct: 330 GTYETSILPYEDC 342
>gi|154414333|ref|XP_001580194.1| thiamine biosynthesis protein ThiI [Trichomonas vaginalis G3]
gi|121914409|gb|EAY19208.1| thiamine biosynthesis protein ThiI, putative [Trichomonas vaginalis
G3]
Length = 436
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 71/199 (35%), Gaps = 35/199 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ + ++L SGG DS + R +V + F YG E + +KI
Sbjct: 198 PVNTSGKTVVLLSGGFDSPVAAWSVMRRGCQVVYVHFHSSPYG-----EWRSSVGKVRKI 252
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
V+ + W +S + +A+K L T R + + AA
Sbjct: 253 VQQLATWGGP---------DTFYSVSIGEQQRQIALKGPSK-LRVTL--YR-RLMVRIAA 299
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI---ETAINLGMESHVTVHTPLMWLKK 177
+A R T + G + TI ++ + AI + + + PL+ K
Sbjct: 300 AIAKRNKCTALTTGDNLGQVAS------QTIESMTTIQAAI-----NPLLILRPLLADSK 348
Query: 178 YETWKLAQDIGGQDLVNLI 196
E + A IG +++ L
Sbjct: 349 EEIIEKAARIGTKEISVLP 367
>gi|14591544|ref|NP_143626.1| hypothetical protein PH1786 [Pyrococcus horikoshii OT3]
gi|3258222|dbj|BAA30905.1| 201aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 201
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 23/179 (12%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L S G DS + R V L F + E++ RK + L + + +
Sbjct: 9 LLSSGIDSPVAIHLMASRGAEVYPLHFR-----QDEIK-EKKARKLVSRLKEIHGEKVKD 62
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
++ + L + K T + A A +G IV
Sbjct: 63 LKVVDALKVQGPVFEKLRELKREKWICIFCKYT--------MYMVAEKYAREVGAEAIVT 114
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G D G + ++ + + +++ + PL+ L K E ++A++IG ++
Sbjct: 115 G----DSLG-----QVASQTLDNLMVISTATNLPIIRPLIALDKEEIVRIAKEIGTFEI 164
>gi|323706134|ref|ZP_08117703.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323534578|gb|EGB24360.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 381
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 33/201 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
I A++L SGG DS + R ++E + F Y Q + + + + KK+
Sbjct: 167 PIGTNGKAVVLLSGGIDSPVAAWMMMKRGVKIEAVYFHSPPYTQ--ERAKDKVIDLCKKL 224
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFA 119
E H++ + I D P T + R ++ A
Sbjct: 225 SEYGQDVYL-----HVVNFTDF------------QLAIYDKCPPKLTTIIMRRMMM-RVA 266
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+A + G ++ G + + IE+ +H+ V PL+ + K E
Sbjct: 267 ENIALKYGAKALITGESLGQVAS---------QTIESLYCTNAVTHMPVFRPLIGMDKSE 317
Query: 180 TWKLAQDIGGQDLVNLILEES 200
++++ IG D+ E+
Sbjct: 318 IVEISKKIGTYDISIRPYEDC 338
>gi|242399698|ref|YP_002995123.1| Putative thiamine biosynthesis protein THII [Thermococcus sibiricus
MM 739]
gi|242266092|gb|ACS90774.1| Putative thiamine biosynthesis protein THII [Thermococcus sibiricus
MM 739]
Length = 366
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 63/193 (32%), Gaps = 33/193 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI----VELMP 65
+ L SGG DS L R V + FD G+ + +E + + +EL+
Sbjct: 170 KVVALLSGGIDSPVAAFLMLKRGAEVIAVHFDQGKNARKVVEKVVEILSDYSPEPIELIV 229
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + +++ L L + + VA L AA +A
Sbjct: 230 ENHFEVLKPYVITLNKLNRREWTCVVCKVA-------------------MLRRAAEVAKE 270
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G IV G D G + + + VH PL+ K E +A+
Sbjct: 271 NGALGIVTG----DSLG-----QVASQTLTNLYFETITVDFPVHRPLLGFDKEEIVSIAR 321
Query: 186 DIGGQD-LVNLIL 197
I D +
Sbjct: 322 KIKTYDAFLEYPY 334
>gi|114320195|ref|YP_741878.1| thiamine biosynthesis/tRNA modification protein ThiI
[Alkalilimnicola ehrlichii MLHE-1]
gi|114226589|gb|ABI56388.1| thiamine biosynthesis/tRNA modification protein ThiI
[Alkalilimnicola ehrlichii MLHE-1]
Length = 422
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 65/202 (32%), Gaps = 27/202 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL L SGG DS R RV+ L F + R ++ L +
Sbjct: 205 RALTLLSGGIDSPVAAFLMAKRGCRVDFLHF-----TASPSQQRADADHTVIRLARQLSR 259
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G + + + M + + + V R + LA RL
Sbjct: 260 YTGHSRLYMVPY----------DHFDMALHGDQRGHEVVLFRRFV-ARTGEALAKRLRAL 308
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G D G + +E ++ + + + PL+ L K + + + IG
Sbjct: 309 ALISG----DSLG-----QVASQTMENMVSTSLAVRMPIMRPLVGLDKADIVAIGRRIGT 359
Query: 190 QDLVNLILEESHTCYLGKRDKR 211
D+ ++ C L R
Sbjct: 360 YDISIQPYKDC--CALLDHQPR 379
>gi|307243613|ref|ZP_07525756.1| thiamine biosynthesis/tRNA modification protein ThiI
[Peptostreptococcus stomatis DSM 17678]
gi|306492982|gb|EFM64992.1| thiamine biosynthesis/tRNA modification protein ThiI
[Peptostreptococcus stomatis DSM 17678]
Length = 395
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 65/201 (32%), Gaps = 29/201 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVE 62
+ A+ L SGG DS R +E + F Y N+ E + +
Sbjct: 175 PLGTNGKAITLLSGGIDSPVASWLVAKRGVDIEAVHFHSYPFTNERSQEK----VRDLAR 230
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ K+ + + L I I+ + + + + A +
Sbjct: 231 ILSKYCGPIKLHMVNILDIQKAIAEKCNEEETTILSRR-------------FMMRIAEEI 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
++ G + + ++ + + + PL+ + K + K
Sbjct: 278 GKSRYCDALITGESIGQVAS---------QTMQGIVCTNAAVSLPIFRPLIAMDKVDIIK 328
Query: 183 LAQDIGGQDLVNLILEESHTC 203
LA++IG D I+ E+ C
Sbjct: 329 LAEEIGTYDTS--IIPETDCC 347
>gi|257056677|ref|YP_003134509.1| thiamine biosynthesis protein ThiI [Saccharomonospora viridis DSM
43017]
gi|256586549|gb|ACU97682.1| thiazole biosynthesis/tRNA modification protein ThiI
[Saccharomonospora viridis DSM 43017]
Length = 393
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 66/200 (33%), Gaps = 27/200 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + AL+L SGG DS A+ R R + + F L K +
Sbjct: 176 PVGSSGRALVLLSGGYDSPVAAYRAMRRGLRCDFVHF-----TGAPLTGPSSTYKAYALV 230
Query: 64 MPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ H++P+ ++ ++ + Q + + A L
Sbjct: 231 RELDRFQGDSRLHVIPIGNAQRSLATAGAGDLQIIAQRR------------LMVRTAEAL 278
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A LG +V+G S + + + + + + PL+ K E
Sbjct: 279 ARELGAQALVVGDSLGQVSS---------QTLANMATVEQATSLPLLRPLVAWDKDEIIA 329
Query: 183 LAQDIGGQDLVNLILEESHT 202
A+ IG ++ L E+ +
Sbjct: 330 EARRIGTAEISKLPDEDCCS 349
>gi|332158033|ref|YP_004423312.1| hypothetical protein PNA2_0391 [Pyrococcus sp. NA2]
gi|331033496|gb|AEC51308.1| hypothetical protein PNA2_0391 [Pyrococcus sp. NA2]
Length = 198
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 23/183 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L S G DS + R V L F Q + E + + V++ L D
Sbjct: 2 RVVALLSSGIDSPVAIHLMASRGAEVYPLHFR--QDDIKENKAKRIVKR----LQEIHGD 55
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I+ + L + +K T + A A +
Sbjct: 56 KVRDLKIVDAFEVQGPVFEKLKEIGKVKWTCIFCKYT--------MYMVAERYAKEVNAE 107
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I+ G D G + ++ + + + + V PL+ L K E K+A++IG
Sbjct: 108 AILTG----DSLG-----QVASQTLDNLLVISTATKLPVIRPLIGLDKEEIVKIAKEIGT 158
Query: 190 QDL 192
++
Sbjct: 159 FEI 161
>gi|46199747|ref|YP_005414.1| thiamine biosynthesis protein thiI [Thermus thermophilus HB27]
gi|55981765|ref|YP_145062.1| thiamine biosynthesis protein ThiI [Thermus thermophilus HB8]
gi|81363769|sp|Q5SHD4|THII_THET8 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|81405503|sp|Q72HP1|THII_THET2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|46197373|gb|AAS81787.1| thiamine biosynthesis protein thiI [Thermus thermophilus HB27]
gi|55773178|dbj|BAD71619.1| probable thiamine biosynthesis protein ThiI [Thermus thermophilus
HB8]
Length = 406
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 58/193 (30%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKW 67
+ L SGG DS + R V + F + L K + E + ++
Sbjct: 176 RVVALLSGGIDSPVAAYRLMRRGAEVVLVHF-----HPFPLLSGASREKAKALAERLARF 230
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ L + + I + T V R L A +A G
Sbjct: 231 QHRLRLHLVPFSEVQRHIIVEAPTAYR------------VVLYR-RYMLRIAEAIAREEG 277
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +C D G + +E + + + V PL+ K E AQ I
Sbjct: 278 A----LALCTGDSLG-----QVASQTLENLHAVNQAATLPVFRPLIGWDKEEIVAEAQRI 328
Query: 188 GGQDLVNLILEES 200
G L EE
Sbjct: 329 GTYATSILPDEEC 341
>gi|70726211|ref|YP_253125.1| thiamine biosynthesis protein ThiI [Staphylococcus haemolyticus
JCSC1435]
gi|123660461|sp|Q4L756|THII_STAHJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|68446935|dbj|BAE04519.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 407
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + + K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEIMKRGVYIEAIHF-----HSPPFTSEK-AKDKVIELTRILSE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R + L A + ++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQINKVVHPRYTMTST----RRM-MLRVADIVLEKVG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + + + PL+ L K + K A++I
Sbjct: 281 ANAIVNGENLGQVAS---------QTLKSMYAINDVTSTPILRPLVSLDKEDIVKKAREI 331
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 332 GTFDVSIQPYEDC 344
>gi|222151633|ref|YP_002560789.1| hypothetical protein MCCL_1386 [Macrococcus caseolyticus JCSC5402]
gi|254784228|sp|B9E7C5|THII_MACCJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|222120758|dbj|BAH18093.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 402
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K+++L +
Sbjct: 180 KTLLMLSGGIDSPVAGIEVMKRGVTIEAIHF-----HSPPFTSEE-AKQKVIDLTRIMAE 233
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ GE H++P + + H + +N+ M + L A A ++
Sbjct: 234 TTGEIKLHLVPFTDIQKMIHKKVPENLTMTSTRR------------MMLKIADRFARQID 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G + + + + + +++ + PL+ L K E A++I
Sbjct: 282 AKALVNGENLGQVAS---------QTLGSMYAINAVTNLPILRPLLTLDKDEIIIKAKEI 332
Query: 188 GGQDLVNLILEES 200
G D E+
Sbjct: 333 GTFDTSIQPFEDC 345
>gi|323464204|gb|ADX76357.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus pseudintermedius ED99]
Length = 406
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 72/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTSEK-AKEKVIELTRIMAE 232
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G HI+P + + + + + +T R + L A + Y++G
Sbjct: 233 RVGSIRLHIVPFTEV-------QKQIHKVVHERYTMTST----RRM-MLRIADKVVYQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + ++ + PL+ L K E + A+DI
Sbjct: 281 ADAIVNGENLGQVAS---------QTLKSMYAINAVTNTPILRPLLSLDKEEIVQKAKDI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPYEDC 344
>gi|319892763|ref|YP_004149638.1| Thiamine biosynthesis protein thiI [Staphylococcus pseudintermedius
HKU10-03]
gi|317162459|gb|ADV06002.1| Thiamine biosynthesis protein thiI [Staphylococcus pseudintermedius
HKU10-03]
Length = 406
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 72/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTSEK-AKEKVIELTRIMAE 232
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G HI+P + + + + + +T R + L A + Y++G
Sbjct: 233 RVGSIRLHIVPFTEV-------QKQIHKVVHERYTMTST----RRM-MLRIADKVVYQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + ++ + PL+ L K E + A+DI
Sbjct: 281 ADAIVNGENLGQVAS---------QTLKSMYAINAVTNTPILRPLLSLDKEEIVQKAKDI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPYEDC 344
>gi|220929105|ref|YP_002506014.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
cellulolyticum H10]
gi|219999433|gb|ACL76034.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
cellulolyticum H10]
Length = 392
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS-FDYGQRNKVELECRLCVRKKIVE 62
+ A+LL SGG DS R +E + F Y ++ + + + + + +
Sbjct: 176 PLGSNGKAMLLLSGGIDSPVAGWMMGKRGVEIEAVHFFSYPYTSERAKQKVIDLAQIMAQ 235
Query: 63 LMPKWKDSLGEDHILPLAILG-DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K + H++P + I+ + + + + ++ I + A
Sbjct: 236 YCGKIRL-----HVVPFTEIQLKINDNCPEEQLTIIMRR-------------IMMKIAEQ 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A ++ ++ G + + +++ ++ V PL+ + K E
Sbjct: 278 IAVKVNAMALITGESMGQVAS---------QTMQSLYCTDAAVNMPVFRPLIGMDKVEVV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ I D L E+
Sbjct: 329 DIARRIDTFDTSVLPYEDC 347
>gi|240103541|ref|YP_002959850.1| hypothetical protein TGAM_1484 [Thermococcus gammatolerans EJ3]
gi|239911095|gb|ACS33986.1| Thiamin biosynthesis protein (thiI) [Thermococcus gammatolerans
EJ3]
Length = 197
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 29/185 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMPKW 67
A+ L S G DS + L R V + F Q E + R V K +L
Sbjct: 2 KAVALLSSGIDSPVAVYLMLRRGVEVVPVHFR--QDPIKEEKVRELWEVLSKYGKLDELI 59
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E+H+ L ++ T + L A + + +G
Sbjct: 60 VVDFAEEHVPVFERLKELKKERWTCIFCK----------------WLMLRRACRIGHEVG 103
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ I+ G D G + ++ + + S + V PL+ + K E K+A++I
Sbjct: 104 ASAIITG----DSLG-----QVASQTLDNLMIVSSASDLPVLRPLIGMDKEEIVKIAKEI 154
Query: 188 GGQDL 192
G ++
Sbjct: 155 GTFEI 159
>gi|149181098|ref|ZP_01859598.1| thiamine biosynthesis [Bacillus sp. SG-1]
gi|148851185|gb|EDL65335.1| thiamine biosynthesis [Bacillus sp. SG-1]
Length = 403
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS + R VE + F + ++K+++L
Sbjct: 179 KAMLMLSGGLDSPVAGYLIMKRGVEVEAVHF-----HSPPFTSE-RAKQKVIDLAKSLSA 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G + H++P + H+ + +N M + L +L
Sbjct: 233 FSGRIKLHVVPFTEIQQTVHNQVPENYTMTSTRR------------MMLRI----TEKLR 276
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +G+ + G + +++ + + ++ V PL+ + K E +A++I
Sbjct: 277 QKHEGLGIVTGESLG-----QVASQTLDSMLAINEVTNTPVLRPLISVDKLEIIDIAKEI 331
Query: 188 GGQDLVNLILEES 200
G D+ L E+
Sbjct: 332 GTHDISILPYEDC 344
>gi|154249448|ref|YP_001410273.1| thiamine biosynthesis protein ThiI [Fervidobacterium nodosum
Rt17-B1]
gi|154153384|gb|ABS60616.1| thiamine biosynthesis/tRNA modification protein ThiI
[Fervidobacterium nodosum Rt17-B1]
Length = 389
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 30/196 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
ALLL SGG DS +A+ R ++TL+F + V+K + ++ ++
Sbjct: 176 RALLLLSGGIDSPVAGWYAMRRGLELQTLTFL-----SPPMTTEKSVQKILDLGRVLARY 230
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ I+PL + + ++ +Q + + A +A R+
Sbjct: 231 LPNGLRMWIVPLTEVQMYIKENAPDEYSLILQRRS------------MMRIANMIARRVK 278
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ G + + + + S + V PL+ K ET A++I
Sbjct: 279 AKAIITGENLGQVAS---------QTLTNMAAIEDASSLLVLRPLIGFDKIETTNKAKEI 329
Query: 188 GGQDLVNLILEESHTC 203
G ++ + +C
Sbjct: 330 GTFEISIQPYID--SC 343
>gi|184154966|ref|YP_001843306.1| thiamine biosynthesis protein ThiI [Lactobacillus fermentum IFO
3956]
gi|227514505|ref|ZP_03944554.1| thiamine-phosphate kinase [Lactobacillus fermentum ATCC 14931]
gi|238692952|sp|B2GAZ4|THII_LACF3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|183226310|dbj|BAG26826.1| thiamine biosynthesis protein ThiI [Lactobacillus fermentum IFO
3956]
gi|227087132|gb|EEI22444.1| thiamine-phosphate kinase [Lactobacillus fermentum ATCC 14931]
gi|299782984|gb|ADJ40982.1| Probable thiamine biosynthesis protein thiI [Lactobacillus
fermentum CECT 5716]
Length = 406
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +++ SGG DS AL R +E + F Y E L K++
Sbjct: 174 PVGTAGKGMMMLSGGIDSPVAAYLALKRGVSLEMVHF-YSPPYTSE--QALAKAKELTGK 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ S+ + + + + V K+ + L V R + L A LA
Sbjct: 231 LAKYSGSIK---------FIQVPFTEIQETVKEKVPEGYLMT--VQRR--LMLRLACALA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + G + + +E+ + + + + V P++ K E K+
Sbjct: 278 QKRAGLAVFNGESLGQVAS---------QTMESMLAIEDVTTMPVLRPVLSYDKNEIIKI 328
Query: 184 AQDIGGQDLVNLILEES 200
A+DI DL L E+
Sbjct: 329 AEDIDTYDLSILPYEDC 345
>gi|20094344|ref|NP_614191.1| ATP pyrophosphatase involved in thiamine biosynthesis [Methanopyrus
kandleri AV19]
gi|19887403|gb|AAM02121.1| ATP pyrophosphatase involved in thiamine biosynthesis [Methanopyrus
kandleri AV19]
Length = 374
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 26/183 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ L SGG DS +A R V L D G + E++ + K E +P
Sbjct: 164 SQSRVVCLVSGGIDSPVAAWYAARRGCEVIWLHLDRG-KYGSEVDAVERLAGKFSEWLPS 222
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ L ED + L + S + ++ + A + +
Sbjct: 223 DVELLIEDFEDFMESLEGLEGESARYRCVLCKRE--------------MIRRACDVCENV 268
Query: 127 GITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G +V+G V S PD + + V PL+ K E +L++
Sbjct: 269 GAVAVVMGDVIGQVASQIPDN----------LAVIDRVARFPVFRPLLGFDKNEVQRLSE 318
Query: 186 DIG 188
+G
Sbjct: 319 RLG 321
>gi|332799546|ref|YP_004461045.1| tRNA sulfurtransferase [Tepidanaerobacter sp. Re1]
gi|332697281|gb|AEE91738.1| tRNA sulfurtransferase [Tepidanaerobacter sp. Re1]
Length = 387
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
A+LL SGG DS + R +E + F + K ++ ++ +
Sbjct: 177 KAVLLLSGGIDSPVAAYMLMKRGVEIEPVYF-----HSFPFTSDRAKEKVIELCRVLAGY 231
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + +L IS ++ + + + ++ + A +A +G
Sbjct: 232 SGQMRLHVVNFTEVLKQISKNTPDEFLTIIMRRMMIRI-------------AQEIAENVG 278
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G + + +E + + + + PL+ K E +A+ I
Sbjct: 279 AKALVTGESLGQVAS---------QTMEALVATNEVATMPIFRPLIGCDKIEIMDIAKKI 329
Query: 188 GGQDLVNLILEES 200
G D+ +
Sbjct: 330 GTYDISIEPYADC 342
>gi|104773809|ref|YP_618789.1| thiamine biosynthesis protein ThiI [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|103422890|emb|CAI97552.1| Thiamine biosynthesis protein ThiI [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 399
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +E + F E L K++ +
Sbjct: 167 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVNIEMVHFFSPPYTS---EKALAKAKELTSI 223
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ + ++ + + + + K+ + L V R L A +
Sbjct: 224 LAKYSGRI---------NFIEVPFAEIQETIKEKLPEGYLMT--VQRR--FMLRLADIIR 270
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + V P+ + K E
Sbjct: 271 EKRHALAIFNGESVGQVAS---------QTLESMAAINNVTTTPVLRPVATMDKTEIIAK 321
Query: 184 AQDIGGQDLVNLILEES 200
A++IG DL E+
Sbjct: 322 AEEIGTFDLSIQPFEDC 338
>gi|256003396|ref|ZP_05428387.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
thermocellum DSM 2360]
gi|255992686|gb|EEU02777.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
thermocellum DSM 2360]
gi|316940181|gb|ADU74215.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
thermocellum DSM 1313]
Length = 392
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS R +E + F Y E + ++ ++
Sbjct: 175 PLGSNGKAVLLLSGGIDSPVAGWMIAKRGVEIEAVHF-YSYPYTSERAKEKVI--ELTKI 231
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + + I +I+ + + + ++ + A +A
Sbjct: 232 LATYCQKINLHIVPFTEIQLEINEKCPHEELTIIMRRA-------------MMRIAEIIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +V G + + I++ + + V PL+ + K E +
Sbjct: 279 NKTGALALVTGESVGQVAS---------QTIQSLVVTNAVVSLPVFRPLIGMDKNEVVDI 329
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 330 AKKIGTFETSILPYEDC 346
>gi|125973578|ref|YP_001037488.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
thermocellum ATCC 27405]
gi|281417782|ref|ZP_06248802.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
thermocellum JW20]
gi|189030625|sp|A3DEB6|THII_CLOTH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|125713803|gb|ABN52295.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
thermocellum ATCC 27405]
gi|281409184|gb|EFB39442.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
thermocellum JW20]
Length = 392
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS R +E + F Y E + ++ ++
Sbjct: 175 PLGSNGKAVLLLSGGIDSPVAGWMIAKRGVEIEAVHF-YSYPYTSERAKEKVI--ELTKI 231
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + + I +I+ + + + ++ + A +A
Sbjct: 232 LATYCQKINLHIVPFTEIQLEINEKCPHEELTIIMRRA-------------MMRIAEIIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +V G + + I++ + + V PL+ + K E +
Sbjct: 279 NKTGALALVTGESVGQVAS---------QTIQSLVVTNAVVSLPVFRPLIGMDKNEVVDI 329
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 330 AKKIGTFETSILPYEDC 346
>gi|313123423|ref|YP_004033682.1| tRNA sulfurtransferase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312279986|gb|ADQ60705.1| Probable tRNA sulfurtransferase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 405
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +E + F E L K++ +
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVNIEMVHFFSPPYTS---EKALAKAKQLTSV 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ + ++ + + + + K+ + L V R L A +
Sbjct: 230 LAKYSGRI---------NFIEVPFAEIQETIKEKLPEGYLMT--VQRR--FMLRLADIIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + V P+ + K E
Sbjct: 277 EKRHALAIFNGESVGQVAS---------QTLESMAAINDVTTTPVLRPVATMDKTEIIAK 327
Query: 184 AQDIGGQDLVNLILEES 200
A++IG DL E+
Sbjct: 328 AEEIGTFDLSIQPFEDC 344
>gi|18977660|ref|NP_579017.1| putative thiamin biosynthesis protein thiI [Pyrococcus furiosus DSM
3638]
gi|6066237|gb|AAF03222.1|AF156097_2 putative thiamine biosynthesis protein THII [Pyrococcus furiosus]
gi|18893386|gb|AAL81412.1| putative thiamin biosynthesis protein thiI [Pyrococcus furiosus DSM
3638]
Length = 363
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 64/190 (33%), Gaps = 27/190 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SGG DS L R V L FD G K +E V + + + P+ +
Sbjct: 167 KVVALISGGIDSPVAAFLMLKRGAEVIALHFDQGTNAKKVVE---KVVEILSDYSPEPIE 223
Query: 70 SLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ E+H + + ++ + + + I L AA +A G
Sbjct: 224 LIVENHFEILKPYVSVLAKLQKREWTCILCK-------------IAMLKRAAEIAKEEGA 270
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IV G D G + + + ++ PL+ K E +A+ IG
Sbjct: 271 LGIVTG----DSLG-----QVASQTLSNLFIETISVDYPIYRPLIGFDKEEIVSIAKRIG 321
Query: 189 GQD-LVNLIL 197
D +
Sbjct: 322 TYDAFLEYPY 331
>gi|21227622|ref|NP_633544.1| hypothetical protein MM_1520 [Methanosarcina mazei Go1]
gi|20906010|gb|AAM31216.1| conserved protein [Methanosarcina mazei Go1]
Length = 275
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 40/190 (21%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG--QRNKVELECRLCVRKK 59
+ IK SA++ FSGG DS+T + A + DR ++ D R+++E +
Sbjct: 11 EAIKARESAVIAFSGGVDSTTLAALAFEELGDRALAVTIDSPLFPRHQLETASQAACEIG 70
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
I + ILP ++ ++ T N + L
Sbjct: 71 I------------QHKILPFSLNSVPYFTANTINRCYFCKKA-------------LLETL 105
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKK 177
A + G ++ G ++ G + R RAI+ A +++P + + K
Sbjct: 106 LEFAEKTGYNAVLEGTNASEIKG--ENRPGY-RAIQEA-------GEKIYSPFVEFNVTK 155
Query: 178 YETWKLAQDI 187
E ++A ++
Sbjct: 156 EEIREIAANL 165
>gi|300811345|ref|ZP_07091842.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|300497709|gb|EFK32734.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|325125473|gb|ADY84803.1| Thiazole biosynthesis protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 405
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +E + F E L K++ +
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVNIEMVHFFSPPYTS---EKALAKAKELTSI 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ + ++ + + + + K+ + L V R L A +
Sbjct: 230 LAKYSGRI---------NFIEVPFAEIQETIKEKLPEGYLMT--VQRR--FMLRLADIIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + V P+ + K E
Sbjct: 277 EKRHALAIFNGESVGQVAS---------QTLESMAAINDVTTTPVLRPVATMDKTEIIAK 327
Query: 184 AQDIGGQDLVNLILEES 200
A++IG DL E+
Sbjct: 328 AEEIGTFDLSIQPFEDC 344
>gi|239617818|ref|YP_002941140.1| thiamine biosynthesis/tRNA modification protein ThiI [Kosmotoga
olearia TBF 19.5.1]
gi|239506649|gb|ACR80136.1| thiamine biosynthesis/tRNA modification protein ThiI [Kosmotoga
olearia TBF 19.5.1]
Length = 404
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 67/191 (35%), Gaps = 23/191 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SALLL SGG DS +AL R + + F +K+++L
Sbjct: 176 SALLLLSGGIDSPVAGWYALKRGITLHAIHF------ASPPYTGEKAFEKVLDLAKALTK 229
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G +L + ++ +NV + + V R + A +A G
Sbjct: 230 YNGGRDMLLYRVHFTKLQLAIHRNVRESL-------SLVIQRRAMM-RIATKIAKEHGYK 281
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G + + IE +G + + V PL K ET ++A+ I
Sbjct: 282 AIVTGENLGQVAS---------QTIENLHTIGSATDILVLRPLTGFDKIETIQIAKKIET 332
Query: 190 QDLVNLILEES 200
++ E+
Sbjct: 333 FEISIQPYEDC 343
>gi|326390537|ref|ZP_08212093.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter ethanolicus JW 200]
gi|325993362|gb|EGD51798.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter ethanolicus JW 200]
Length = 380
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A +L SGG DS + R VE + F + K +
Sbjct: 168 PLGTNGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYF-----HSPPYTSERAKDKVVDLC 222
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAA 120
E++ ++ + + ++ ++I + P T + R ++ A
Sbjct: 223 EVLSQYGQKIKLHVV-------------HFTDLQLEIYEKCPPRFTTIIMRRMMM-KIAE 268
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + G ++ G + + IE+ + + PL+ + K E
Sbjct: 269 KIAQKNGSMALITGESLGQVAS---------QTIESLYVTNASVSMPIFRPLIGMDKTEI 319
Query: 181 WKLAQDIGGQDLVNLILEES 200
LAQ IG ++ E+
Sbjct: 320 IDLAQKIGTFEISIRPYEDC 339
>gi|307266518|ref|ZP_07548051.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306918437|gb|EFN48678.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 380
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A +L SGG DS + R VE + F + K +
Sbjct: 168 PLGTNGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYF-----HSPPYTSERAKDKVVDLC 222
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAA 120
E++ ++ + + ++ ++I + P T + R ++ A
Sbjct: 223 EVLSQYGQKIKLHVV-------------HFTDLQLEIYEKCPPRFTTIIMRRMMM-KIAE 268
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + G ++ G + + IE+ + + PL+ + K E
Sbjct: 269 KIAQKNGSMALITGESLGQVAS---------QTIESLYVTNASVSMPIFRPLIGMDKTEI 319
Query: 181 WKLAQDIGGQDLVNLILEES 200
LAQ IG ++ E+
Sbjct: 320 IDLAQKIGTFEISIRPYEDC 339
>gi|194017236|ref|ZP_03055848.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
pumilus ATCC 7061]
gi|194011104|gb|EDW20674.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
pumilus ATCC 7061]
Length = 401
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 71/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A+ R ++E + F ++K+++L
Sbjct: 173 PVGSSGRAMLMLSGGFDSPVAGYQAMKRGIQIEAVHFF------SPPYTSERAKQKVIDL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
GE HI+P + ++ H + +N M + L A
Sbjct: 227 TECLAAYGGEVKLHIVPFTKIQELIHKQVPENYTMTSTRR------------MMLKIADK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + I+ G + + +E+ + ++ + PL+ + K +
Sbjct: 275 IREKRDALAIITGESLGQVAS---------QTLESMYAINHVTNTPIIRPLIAVDKNDII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ A+ IG + E+
Sbjct: 326 EEARRIGTYETSIQPFEDC 344
>gi|229543529|ref|ZP_04432589.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
coagulans 36D1]
gi|229327949|gb|EEN93624.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
coagulans 36D1]
Length = 402
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 72/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS A+ R +VE + F + ++K ++L K
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGVKVEAVHF-----HSPPFTS-PRAKQKALDLAQKISA 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G + HI+P + + H + + +M +Q + L L
Sbjct: 233 YSGSMKVHIVPFTKIQETIHKGVPEGYSMTVQRR------------VMLEITDRLRKIHN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + + + V PL+ + K + +AQ I
Sbjct: 281 GLAIVTGESLGQVAS---------QTLDSMVAINDVTTTPVLRPLVSMDKLDIIDIAQKI 331
Query: 188 GGQDLVNLILEES 200
G D+ +L E+
Sbjct: 332 GTYDISSLPYEDC 344
>gi|56421330|ref|YP_148648.1| thiamine biosynthesis protein ThiI [Geobacillus kaustophilus
HTA426]
gi|81346656|sp|Q5KW56|THII_GEOKA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|56381172|dbj|BAD77080.1| thiamine biosynthesis [Geobacillus kaustophilus HTA426]
Length = 401
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS A+ R +E + F ++K+++L+ K
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKLTT 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G + HI+P + ++ + V + +L +T R L L R
Sbjct: 233 YGGRIKLHIVPFTEVQQ----AIYQGVPNEY---SLIST----RRA-MLRITDALRRRQR 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +E+ + ++ + PL+ + K E +LA+ I
Sbjct: 281 ALAIVTGESLGQVAS---------QTLESMYVINEVTNTPILRPLVSMDKLEIIELAKQI 331
Query: 188 GGQDLVNLILEES 200
G D+ L E+
Sbjct: 332 GTHDISILPYEDC 344
>gi|325684333|gb|EGD26502.1| thiamine biosynthesis protein ThiI [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 405
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +E + F E L K++ +
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVNIEMVHFFSPPYTS---EKALAKAKELTSV 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ + ++ + + + + K+ + L V R L A +
Sbjct: 230 LAKYSGRI---------NFIEVPFAEIQETIKEKLPEGYLMT--VQRR--FMLRLADIIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + V P+ + K E
Sbjct: 277 EKRHALAIFNGESVGQVAS---------QTLESMAAINDVTTTPVLRPVATMDKTEIIAK 327
Query: 184 AQDIGGQDLVNLILEES 200
A++IG DL E+
Sbjct: 328 AEEIGTFDLSIQPFEDC 344
>gi|289422744|ref|ZP_06424584.1| thiamine biosynthesis/tRNA modification protein ThiI
[Peptostreptococcus anaerobius 653-L]
gi|289156923|gb|EFD05548.1| thiamine biosynthesis/tRNA modification protein ThiI
[Peptostreptococcus anaerobius 653-L]
Length = 393
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 62/194 (31%), Gaps = 27/194 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVE 62
+ A+ L SGG DS R +E + F Y N+ E + +
Sbjct: 176 PLGTNGKAMCLLSGGIDSPVSSWMVAKRGVDIEAVHFHSYPFTNERSQEK----VRDLAR 231
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ K+ + + L I I+ + + + + + A +
Sbjct: 232 ILSKYCGPIKLHMVNTLDIQKAIAENCNEEETTILSRR-------------FMMRIAQQI 278
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
T +V G + + ++ + V PL+ + K + K
Sbjct: 279 GESRYCTALVTGESIGQVAS---------QTMQGLYCTNASVTMPVFRPLIAMDKIDIIK 329
Query: 183 LAQDIGGQDLVNLI 196
+A+DIG + +
Sbjct: 330 IAEDIGTYETSIIP 343
>gi|328950829|ref|YP_004368164.1| tRNA sulfurtransferase [Marinithermus hydrothermalis DSM 14884]
gi|328451153|gb|AEB12054.1| tRNA sulfurtransferase [Marinithermus hydrothermalis DSM 14884]
Length = 404
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 61/193 (31%), Gaps = 37/193 (19%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVELMPKW 67
++L SGG DS + R R + F + KK VE++ W
Sbjct: 174 KVVVLLSGGIDSPVAAWRMMKRGARAVFVHF-----HSYPHTDYYSAVKSKKTVEVLADW 228
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII----FLVFAATLA 123
+ + + +I + R ++ L A +A
Sbjct: 229 QGESKLYLVPLAKVQEEIFARCPER-----------------YRTLLYRRFMLRIAEAIA 271
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ +V G D G + +E +G + V PL+ + K E +
Sbjct: 272 EQEDAKALVTG----DALG-----QVASQTLENMHAVGRAVRMLVLRPLVGMDKTEVIEA 322
Query: 184 AQDIGGQDLVNLI 196
A+ IG ++ L
Sbjct: 323 AKRIGTYEISILP 335
>gi|308174641|ref|YP_003921346.1| persulfide ATP pyrophosphatase [Bacillus amyloliquefaciens DSM 7]
gi|307607505|emb|CBI43876.1| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
and tRNA modification [Bacillus amyloliquefaciens DSM 7]
gi|328554567|gb|AEB25059.1| thiamine biosynthesis protein ThiI [Bacillus amyloliquefaciens
TA208]
gi|328912971|gb|AEB64567.1| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
and tRNA modification [Bacillus amyloliquefaciens LL3]
Length = 401
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVIDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G HI+P ++ + +N M + L A
Sbjct: 227 AGCLARFGGSMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ I+ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREERKALAIITGESLGQVAS---------QTLESMYAINAVTATPILRPLIGMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG + E+
Sbjct: 326 EKSKEIGTYETSIQPFEDC 344
>gi|301598005|ref|ZP_07243013.1| hypothetical protein AbauAB059_19368 [Acinetobacter baumannii
AB059]
Length = 321
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 79/235 (33%), Gaps = 29/235 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVRKKIVELMP 65
++ LFSGG DS+ + + +S Y Q + R +++
Sbjct: 44 SVCLFSGGLDSTIGAIDLKAQGKKSVLVSHAYPKDRQKQDHVYYDLQFDNARFQVLANPR 103
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
K K+ + + + + + ++ N + ++P N + + L R
Sbjct: 104 KVKEIPADVQMRTRSFNFIAFGALIATALSKNHFSNKIIKLYIPE-NGL-ISINPPLTPR 161
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
IG T + ++ + + + V + P + K E +
Sbjct: 162 R------IGALSTRTTH-----PYFLQKLN-ILFKNIGLPVEIENPYQYKTKGE---MML 206
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ Q + I + +C K G C C C +R+ + +++ Y+D
Sbjct: 207 ECKDQSSLKKIAATTVSC-----GKWKRSGMQCGKCLPCLIRRASFDKYQ--YKD 254
>gi|301513564|ref|ZP_07238801.1| hypothetical protein AbauAB05_18334 [Acinetobacter baumannii AB058]
Length = 365
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 79/235 (33%), Gaps = 29/235 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVRKKIVELMP 65
++ LFSGG DS+ + + +S Y Q + R +++
Sbjct: 147 SVCLFSGGLDSTIGAIDLKAQGKKSVLVSHAYPKDRQKQDHVYYDLQFDNARFQVLANPR 206
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
K K+ + + + + + ++ N + ++P N + + L R
Sbjct: 207 KVKEIPADVQMRTRSFNFIAFGALIATALSKNHFSNKIIKLYIPE-NGL-ISINPPLTPR 264
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
IG T + ++ + + + V + P + K E +
Sbjct: 265 R------IGALSTRTTH-----PYFLQKLN-ILFKNIGLPVEIENPYQYKTKGE---MML 309
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ Q + I + +C K G C C C +R+ + +++ Y+D
Sbjct: 310 ECKDQSSLKKIAATTVSC-----GKWKRSGMQCGKCLPCLIRRASFDKYQ--YKD 357
>gi|217322866|ref|YP_002326598.1| hypothetical protein ABBFA_002700 [Acinetobacter baumannii
AB307-0294]
gi|213985812|gb|ACJ56111.1| hypothetical protein ABBFA_002700 [Acinetobacter baumannii
AB307-0294]
Length = 310
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 79/235 (33%), Gaps = 29/235 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVRKKIVELMP 65
++ LFSGG DS+ + + +S Y Q + R +++
Sbjct: 18 SVCLFSGGLDSTIGAIDLKAQGKKSVLVSHAYPKDRQKQDHVYYDLQFDNARFQVLANPR 77
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
K K+ + + + + + ++ N + ++P N + + L R
Sbjct: 78 KVKEIPADVQMRTRSFNFIAFGALIATALSKNHFSNKIIKLYIPE-NGL-ISINPPLTPR 135
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
IG T + ++ + + + V + P + K E +
Sbjct: 136 R------IGALSTRTTH-----PYFLQKLN-ILFKNIGLPVEIENPYQYKTKGE---MML 180
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ Q + I + +C K G C C C +R+ + +++ Y+D
Sbjct: 181 ECKDQSSLKKIAATTVSC-----GKWKRSGMQCGKCLPCLIRRASFDKYQ--YKD 228
>gi|169796893|ref|YP_001714686.1| hypothetical protein ABAYE2885 [Acinetobacter baumannii AYE]
gi|213156706|ref|YP_002318367.1| hypothetical protein AB57_0976 [Acinetobacter baumannii AB0057]
gi|301347575|ref|ZP_07228316.1| hypothetical protein AbauAB0_15040 [Acinetobacter baumannii AB056]
gi|332852399|ref|ZP_08434168.1| hypothetical protein HMPREF0021_01743 [Acinetobacter baumannii
6013150]
gi|332870980|ref|ZP_08439593.1| hypothetical protein HMPREF0020_03246 [Acinetobacter baumannii
6013113]
gi|169149820|emb|CAM87711.1| conserved hypothetical protein from bacteriophage [Acinetobacter
baumannii AYE]
gi|213055866|gb|ACJ40768.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
gi|323517049|gb|ADX91430.1| hypothetical protein ABTW07_0994 [Acinetobacter baumannii
TCDC-AB0715]
gi|332729243|gb|EGJ60585.1| hypothetical protein HMPREF0021_01743 [Acinetobacter baumannii
6013150]
gi|332731740|gb|EGJ63020.1| hypothetical protein HMPREF0020_03246 [Acinetobacter baumannii
6013113]
Length = 442
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 79/235 (33%), Gaps = 29/235 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVRKKIVELMP 65
++ LFSGG DS+ + + +S Y Q + R +++
Sbjct: 150 SVCLFSGGLDSTIGAIDLKAQGKKSVLVSHAYPKDRQKQDHVYYDLQFDNARFQVLANPR 209
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
K K+ + + + + + ++ N + ++P N + + L R
Sbjct: 210 KVKEIPADVQMRTRSFNFIAFGALIATALSKNHFSNKIIKLYIPE-NGL-ISINPPLTPR 267
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
IG T + ++ + + + V + P + K E +
Sbjct: 268 R------IGALSTRTTH-----PYFLQKLN-ILFKNIGLPVEIENPYQYKTKGE---MML 312
Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ Q + I + +C K G C C C +R+ + +++ Y+D
Sbjct: 313 ECKDQSSLKKIAATTVSC-----GKWKRSGMQCGKCLPCLIRRASFDKYQ--YKD 360
>gi|210623574|ref|ZP_03293900.1| hypothetical protein CLOHIR_01850 [Clostridium hiranonis DSM 13275]
gi|210153444|gb|EEA84450.1| hypothetical protein CLOHIR_01850 [Clostridium hiranonis DSM 13275]
Length = 397
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 64/209 (30%), Gaps = 45/209 (21%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A A+ L SGG DS R +E + F + K +
Sbjct: 180 PMGTAGKAMSLLSGGIDSPVATWMVAKRGMDIECIHF-----HTYPFTSERSREKVLDLA 234
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ ++ + L I +I+ + + + R ++ +
Sbjct: 235 RTLSRYCGPIKVHCCNILEIEKEITEKLNREETTIHSR-----------RFMMMITQ--R 281
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--------HVTVHTPLM 173
LA + IV G +I + + + V PL+
Sbjct: 282 LAEQRHCQAIVTG-----------------ESIGQVASQTIYGLTCTNAVCSLPVFRPLI 324
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHT 202
+ K + +AQ+IG DL + E+ +
Sbjct: 325 AMDKSDIIDIAQEIGTYDLSIVPEEDCCS 353
>gi|269215627|ref|ZP_06159481.1| thiamine biosynthesis/tRNA modification protein ThiI [Slackia
exigua ATCC 700122]
gi|269131114|gb|EEZ62189.1| thiamine biosynthesis/tRNA modification protein ThiI [Slackia
exigua ATCC 700122]
Length = 421
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 55/201 (27%), Gaps = 41/201 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I A + L S G DS L R + F
Sbjct: 178 PIGTAGKVVCLLSSGIDSPVALWRMARRGATCVAVHFS---------------------- 215
Query: 64 MPKWKDSLGEDHILPL--AILGDISHSSLTKNVAMKIQDNNLPNTFVPGR------NIIF 115
+ + + I+ + + V + T VP R +
Sbjct: 216 -GRPQTQATSEFIVDDIAHTIEGFGGIARMYVVPFGDYQRTIAGT-VPQRLRIIVYRRLM 273
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ AA +A R G +V G + + ++ G + V PL+
Sbjct: 274 MRVAAAIARREGAKALVTGESLGQVAS---------QTLDNLAATGSAVDMQVFRPLIGS 324
Query: 176 KKYETWKLAQDIGGQDLVNLI 196
K E AQ +G DL +
Sbjct: 325 DKLEIIADAQKLGTFDLSSTP 345
>gi|260663359|ref|ZP_05864250.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
fermentum 28-3-CHN]
gi|260552211|gb|EEX25263.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
fermentum 28-3-CHN]
Length = 406
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 72/197 (36%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +++ SGG DS AL R +E + F Y E L K++
Sbjct: 174 PVGTAGKGMMMLSGGIDSPVAAYLALKRGVSLEMVHF-YSPPYTSE--QALAKAKELTGK 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ S+ + + + + V K+ + L V R + L A LA
Sbjct: 231 LAKYSGSIK---------FIQVPFTEIQETVKEKVPEGYLMT--VQRR--LMLRLACALA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + G + + +E+ + + + + V P++ K E K+
Sbjct: 278 QKRAGLAVFNGESLGQVAS---------QTMESMLAIEDVTTMPVLRPVLSYDKNEIIKI 328
Query: 184 AQDIGGQDLVNLILEES 200
A+ I DL L E+
Sbjct: 329 AEGIDTYDLSILPYEDC 345
>gi|297544908|ref|YP_003677210.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842683|gb|ADH61199.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 380
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A +L SGG DS + R +E + F + K +
Sbjct: 168 PLGTNGKATVLLSGGIDSPVATWMMMKRGVEIEAVYF-----HSPPYTSERAKDKVVDLC 222
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAA 120
+++ ++ + + ++ ++I + P T + R ++ A
Sbjct: 223 KVLSQYGQKIKLHVV-------------HFTDLQLEIYEKCPPKFTTIIMRRMMM-KIAE 268
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + G +V G + + IE+ + + PL+ + K E
Sbjct: 269 KIAQQNGSMALVTGESLGQVAS---------QTIESLYVTNASVSIPIFRPLIGMDKTEI 319
Query: 181 WKLAQDIGGQDLVNLILEES 200
LAQ IG ++ E+
Sbjct: 320 INLAQKIGTFEISIRPYEDC 339
>gi|320449234|ref|YP_004201330.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermus
scotoductus SA-01]
gi|320149403|gb|ADW20781.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermus
scotoductus SA-01]
Length = 411
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 57/193 (29%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKW 67
+ L SGG DS + R V + F + L K I E + ++
Sbjct: 178 KVVALLSGGIDSPVAAYRLMRRGAEVVLVHF-----HPFPLLSGQSREKAKAIAERLARF 232
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + + I + V R L A +A G
Sbjct: 233 QHRITLHLVPFSEVQRQIILEAPKAYR------------VVLYR-RYMLRIAEAIAKEEG 279
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ G D G + +E + + + V PL+ K E A+ I
Sbjct: 280 ALALATG----DSLG-----QVASQTLENLHVVNQAATLPVFRPLIGFDKVEIKAEAERI 330
Query: 188 GGQDLVNLILEES 200
G + L EE
Sbjct: 331 GTYAISILPDEEC 343
>gi|20094215|ref|NP_614062.1| thiamine biosynthesis ATP pyrophosphatase [Methanopyrus kandleri
AV19]
gi|19887243|gb|AAM01992.1| Thiamine biosynthesis ATP pyrophosphatase [Methanopyrus kandleri
AV19]
Length = 348
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 41/191 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL L SGG DS + R + L F + ELE + + P +
Sbjct: 160 RALCLLSGGFDSPVATWMVMRRGLECKGLHFL---VTESELEAARENERVLRRWCPDFDL 216
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ E H L + L + + + + + L A+ A RLG
Sbjct: 217 LVDESHREFLETAEERLTGRLKRYLCVVCK-------------MRMLERASQWADRLGCD 263
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--------HVTVHTPLMWLKKYETW 181
IV G ++ + + + + V PL+ L K E
Sbjct: 264 CIVTG-----------------DSLGQVASQTVWNLKLEESQVNGIVLRPLVGLNKPEIV 306
Query: 182 KLAQDIGGQDL 192
+ + IG +
Sbjct: 307 RYGRRIGVPER 317
>gi|320184320|gb|EFW59132.1| hypothetical protein SGF_03485 [Shigella flexneri CDC 796-83]
Length = 439
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 71/221 (32%), Gaps = 25/221 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL---MPKWK 68
+ LFSGG DS+ L +S Y + + + +
Sbjct: 156 VSLFSGGLDSAIGAIDLLAAGRAPLLVSHAYKGDKSRQDQIAEKLSGQFSRFEINADPHI 215
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D + L ++ +++ +I + FVP N F+ A L R
Sbjct: 216 YQGVTDITMRTRSLNFLALAAVGACAVQEISQQEKIDLFVPE-NG-FISLNAPLTPRR-- 271
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IG T + I +I+ I + + P + K K+ +
Sbjct: 272 ----IGSLSTRTTH-----PHFITSIQK-IFDALGISCQIINPYQFKTKG---KMISECS 318
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ L++ I+E + +C G C C C +R+
Sbjct: 319 NKQLLSKIVESTVSC-----SHWKRMGQQCGVCIPCIIRRA 354
>gi|157693359|ref|YP_001487821.1| thiamine biosynthesis protein ThiI [Bacillus pumilus SAFR-032]
gi|189030621|sp|A8FG94|THII_BACP2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|157682117|gb|ABV63261.1| thiamine biosynthesis protein [Bacillus pumilus SAFR-032]
Length = 401
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A+ R ++E + F ++K+++L
Sbjct: 173 PVGSSGRAMLMLSGGFDSPVAGYQAMKRGIQIEAVHFF------SPPYTSERAKQKVIDL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
GE HI+P + ++ H + +N M + L A
Sbjct: 227 TECLAAYGGEIKLHIVPFTKIQELIHKQVPENYTMTSTRR------------MMLKIADK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + I+ G + + +E+ + ++ + PL+ + K +
Sbjct: 275 IREKRDALAIITGESLGQVAS---------QTLESMYAINHVTNTPIIRPLIAVDKNDII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
A+ IG + E+
Sbjct: 326 DEARRIGTYETSIQPFEDC 344
>gi|116513815|ref|YP_812721.1| thiamine biosynthesis protein ThiI [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|122275415|sp|Q04B89|THII_LACDB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|116093130|gb|ABJ58283.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
Length = 405
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +E + F E L K++ +
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVNIEMVHFFSPPYTS---EKALAKAKELTSI 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ + ++ + + + + K+ + L V R L A +
Sbjct: 230 LAKYSGRI---------NFIEVPFAEIQETIKEKLPEGYLMT--VQRR--FMLRLADIIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + V P+ + K E
Sbjct: 277 EKRHALAIFNGESVGQVAS---------QTLESMSAINDVTTTPVLRPVATMDKTEIIAK 327
Query: 184 AQDIGGQDLVNLILEES 200
A++IG DL E+
Sbjct: 328 AEEIGTFDLSIQPFEDC 344
>gi|260912390|ref|ZP_05918937.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633490|gb|EEX51633.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 432
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/237 (15%), Positives = 71/237 (29%), Gaps = 42/237 (17%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DS L +S YG K + +SL
Sbjct: 156 CMLSGGLDSFIGAINLLKDGKEPIFVS-HYGG------------GKGVKVYQDSVVNSLK 202
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT-NI 131
+ + +S R+++F A LA +G ++
Sbjct: 203 IQYAVDSKRFFRFYAASQNGAEDTTRS-----------RSLMFFAHAIVLASGIGHHVDL 251
Query: 132 VI---GVCETDYS------GYPDCR---HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ GV + G R + + + G++ +++ P K E
Sbjct: 252 YVPENGVISLNIPLTVMRLGSLSTRTTHPYFMGMFQKLLT-GLDIDISLVNPFQMQTKGE 310
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYLRQKGWMEFK 235
K +D+ D +N +++ +C + + G C C C +R+
Sbjct: 311 MMKTCKDL---DFLNAHYQDTLSCSHPDQGRWTGDAVGHCGECLPCTIRKAAIKAAG 364
>gi|256850914|ref|ZP_05556303.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 27-2-CHN]
gi|260661128|ref|ZP_05862042.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 115-3-CHN]
gi|282934174|ref|ZP_06339452.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 208-1]
gi|297205792|ref|ZP_06923187.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii JV-V16]
gi|256615976|gb|EEU21164.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 27-2-CHN]
gi|260548065|gb|EEX24041.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 115-3-CHN]
gi|281301788|gb|EFA94054.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 208-1]
gi|297148918|gb|EFH29216.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii JV-V16]
Length = 404
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS AL R +E + F + L K++ +
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLALKRGVDIEMVHFFSPPYTS---DKALAKAKELTGI 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + + P A + + L + M IQ L A +
Sbjct: 230 LANYCGKITFIAV-PFAEIQETIKEKLPEGYLMTIQRR------------FMLRLADMIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + V P+ + K E +L
Sbjct: 277 EKRKGLAIFNGESVGQVAS---------QTLESMAAINNVTTTPVIRPVATMDKTEIIRL 327
Query: 184 AQDIGGQDLVNLILEES 200
A++IG DL + E+
Sbjct: 328 AEEIGTFDLSVMPFEDC 344
>gi|238855290|ref|ZP_04645609.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 269-3]
gi|260664648|ref|ZP_05865500.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii SJ-7A-US]
gi|282932417|ref|ZP_06337842.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 208-1]
gi|313471898|ref|ZP_07812390.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 1153]
gi|238832182|gb|EEQ24500.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 269-3]
gi|239529182|gb|EEQ68183.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 1153]
gi|260561713|gb|EEX27685.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii SJ-7A-US]
gi|281303366|gb|EFA95543.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
jensenii 208-1]
Length = 404
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS AL R +E + F + L K++ +
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLALKRGVDIEMVHFFSPPYTS---DKALAKAKELTGI 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + + P A + + L + M IQ L A +
Sbjct: 230 LANYCGKITFIAV-PFAEIQETIKEKLPEGYLMTIQRR------------FMLRLADMIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + V P+ + K E +L
Sbjct: 277 EKRKGLAIFNGESVGQVAS---------QTLESMAAINNVTTTPVIRPVATMDKTEIIRL 327
Query: 184 AQDIGGQDLVNLILEES 200
A++IG DL + E+
Sbjct: 328 AEEIGTFDLSVMPFEDC 344
>gi|229141384|ref|ZP_04269922.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST26]
gi|228642165|gb|EEK98458.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST26]
Length = 403
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 179 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 233
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 234 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ + PL+ + K E K+A++I
Sbjct: 281 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPIIRPLITMDKLEIIKIAEEI 331
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 332 GTYDISIRPYEDC 344
>gi|49478716|ref|YP_038696.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|206977173|ref|ZP_03238072.1| thiamine biosynthesis protein ThiI [Bacillus cereus H3081.97]
gi|217962135|ref|YP_002340705.1| thiamine biosynthesis protein ThiI [Bacillus cereus AH187]
gi|222098121|ref|YP_002532178.1| thiamine biosynthesis protein thii [Bacillus cereus Q1]
gi|81394601|sp|Q6HCN0|THII_BACHK RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|226703942|sp|B7HSI4|THII_BACC7 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|254784219|sp|B9J151|THII_BACCQ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|49330272|gb|AAT60918.1| thiamine biosynthesis protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|206744658|gb|EDZ56066.1| thiamine biosynthesis protein ThiI [Bacillus cereus H3081.97]
gi|217066178|gb|ACJ80428.1| thiamine biosynthesis protein ThiI [Bacillus cereus AH187]
gi|221242179|gb|ACM14889.1| thiamine biosynthesis protein [Bacillus cereus Q1]
Length = 404
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ + PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPIIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|212224157|ref|YP_002307393.1| thiamine biosynthesis protein ThiI [Thermococcus onnurineus NA1]
gi|212009114|gb|ACJ16496.1| Thiamine biosynthesis protein ThiI [Thermococcus onnurineus NA1]
Length = 383
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 65/187 (34%), Gaps = 24/187 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SGG DS + R V + G++ VRK +L
Sbjct: 184 KVVALLSGGIDSPVAAFLMMKRGVEVIPVHIYMGEKT------LEKVRKIWNQLRKYGYG 237
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
GE ++ I +++ N F + + A +A G
Sbjct: 238 GKGELIVVKPKERERI------LQKLKELKKENYTCVFCKF---MMVRHADRIAKDFGAK 288
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV+G D G + +E + S + ++ PL+ + K E K+A++IG
Sbjct: 289 GIVMG----DSLG-----QVASQTLENMYIVSRASDLPIYRPLIGMDKEEIVKIAKEIGT 339
Query: 190 QDLVNLI 196
+L L
Sbjct: 340 FELSTLP 346
>gi|296269306|ref|YP_003651938.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermobispora
bispora DSM 43833]
gi|296092093|gb|ADG88045.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermobispora
bispora DSM 43833]
Length = 398
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ + AL L SGG DS + R RV+ L F Y E + +
Sbjct: 182 PVGSSGRALALLSGGIDSPVAAYRMMRRGLRVDFLHFSGIPY---TTSE---SIYKAYAL 235
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
V + K++ ++P +S +A+ Q + L AA
Sbjct: 236 VRTLDKFQGR-SRLWVVPFGKAQQSIKASGQDRLAVIAQRR------------LMLKTAA 282
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A R+ ++ G S + + + + PL+ + K E
Sbjct: 283 EVARRIHAEALITGDSLGQVSS---------QTLANITAQDNAVELPILRPLIGMDKAEI 333
Query: 181 WKLAQDIGGQDLVNLILEES 200
A+ IG ++ L E+
Sbjct: 334 IAEARRIGTLEISELPDEDC 353
>gi|302338413|ref|YP_003803619.1| thiamine biosynthesis/tRNA modification protein ThiI [Spirochaeta
smaragdinae DSM 11293]
gi|301635598|gb|ADK81025.1| thiamine biosynthesis/tRNA modification protein ThiI [Spirochaeta
smaragdinae DSM 11293]
Length = 404
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 37/197 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKW 67
++L SGG DS R +++ + F + L KK+ E++ +
Sbjct: 179 KGVVLLSGGIDSPVAAFLMAKRGLKLDAVYF-----HAYPYTSNEALDKVKKLAEILAPY 233
Query: 68 KDSLGEDHILPLA----ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ H++P + S + + + ++ + A +A
Sbjct: 234 TGGI-RLHVIPFTEAQIFMKQRGRS---EELTLHMRAA-------------MVEIADMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G +V G + IE+ G + + P++ L K E +
Sbjct: 277 ADTGAKALVTGEAL---------SQVASQTIESITLTGSFAQRPIFRPVIGLDKEEIITI 327
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 328 ARRIGTFETSILPYEDC 344
>gi|219851835|ref|YP_002466267.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanosphaerula palustris E1-9c]
gi|219546094|gb|ACL16544.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanosphaerula palustris E1-9c]
Length = 361
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 63/180 (35%), Gaps = 22/180 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ LFSGG DS + R ++ + Y + E + ++++E + +++ +
Sbjct: 170 VALFSGGIDSPVASYMMMKRGCKIIPI---YVALDSFLTEKHIARAEQVIECLRQYQPDI 226
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
I ++ K + + F R A A +G I
Sbjct: 227 ALHVISDDYLIK-------AKEALVARKLEKYTCVFCKRR---MYRLATKFAEEVGAIGI 276
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G + + ++ L + + ++ PL+ L K E +A+ IG +
Sbjct: 277 VTGESLGQVAS---------QTLDNMTVLTNATTMPIYRPLIGLDKTEIISIARKIGTFE 327
>gi|314936185|ref|ZP_07843532.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus hominis subsp. hominis C80]
gi|313654804|gb|EFS18549.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus hominis subsp. hominis C80]
Length = 407
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 31/194 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL SGG DS + R ++E + F + + K++EL +
Sbjct: 179 KTLLQLSGGIDSPVAGMEIMKRGVKIEAIHF-----HSPPFTSEK-AKDKVIELTRILSE 232
Query: 70 SLG--EDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+G + HI+P L I+ S + + +T R + L + R+
Sbjct: 233 RVGPIKLHIVPFTALQKQINKSVHPRY--------TMTST----RRM-MLRVTDIILERI 279
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G IV G + + +++ + + + PL+ L K + K A++
Sbjct: 280 GANAIVNGENLGQVAS---------QTLKSMYAINDVTSTPILRPLISLDKEDIIKKAKE 330
Query: 187 IGGQDLVNLILEES 200
IG ++ E+
Sbjct: 331 IGTFEVSIQPYEDC 344
>gi|228474506|ref|ZP_04059239.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus hominis SK119]
gi|228271535|gb|EEK12897.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus hominis SK119]
Length = 407
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 31/194 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL SGG DS + R ++E + F + + K++EL +
Sbjct: 179 KTLLQLSGGIDSPVAGMEIMKRGVKIEAIHF-----HSPPFTSEK-AKDKVIELTRILSE 232
Query: 70 SLG--EDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+G + HI+P L I+ S + + +T R + L + R+
Sbjct: 233 RVGPIKLHIVPFTALQKQINKSVHPRY--------TMTST----RRM-MLRVTDIILERI 279
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G IV G + + +++ + + + PL+ L K + K A++
Sbjct: 280 GANAIVNGENLGQVAS---------QTLKSMYAINDVTSTPILRPLISLDKEDIIKKAKE 330
Query: 187 IGGQDLVNLILEES 200
IG ++ E+
Sbjct: 331 IGTFEVSIQPYEDC 344
>gi|253564120|ref|ZP_04841577.1| argininosuccinate synthase [Bacteroides sp. 3_2_5]
gi|251947896|gb|EES88178.1| argininosuccinate synthase [Bacteroides sp. 3_2_5]
gi|301161583|emb|CBW21123.1| putative argininosuccinate synthase [Bacteroides fragilis 638R]
Length = 401
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 18/134 (13%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+++ ++ FSGG D S T + A ++ V + G ++ +L+ K+ +
Sbjct: 1 MEQKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGAV 60
Query: 64 MPKWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
D E + L I G++ + + + IF A
Sbjct: 61 KYVTLDVTQEYYEKSLKYMIFGNVLRN---GTYPISVSSER-----------IFQALAIA 106
Query: 122 -LAYRLGITNIVIG 134
A +G I G
Sbjct: 107 RYAKEIGAEAIAHG 120
>gi|60680054|ref|YP_210198.1| putative argininosuccinate synthase [Bacteroides fragilis NCTC
9343]
gi|60491488|emb|CAH06240.1| putative argininosuccinate synthase [Bacteroides fragilis NCTC
9343]
Length = 401
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 18/134 (13%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+++ ++ FSGG D S T + A ++ V + G ++ +L+ K+ +
Sbjct: 1 MEQKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGAV 60
Query: 64 MPKWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
D E + L I G++ + + + IF A
Sbjct: 61 KYVTLDVTQEYYEKSLKYMIFGNVLRN---GTYPISVSSER-----------IFQALAIA 106
Query: 122 -LAYRLGITNIVIG 134
A +G I G
Sbjct: 107 RYAKEIGAEAIAHG 120
>gi|53711824|ref|YP_097816.1| argininosuccinate synthase [Bacteroides fragilis YCH46]
gi|255009885|ref|ZP_05282011.1| argininosuccinate synthase [Bacteroides fragilis 3_1_12]
gi|265765192|ref|ZP_06093467.1| argininosuccinate synthase [Bacteroides sp. 2_1_16]
gi|313147673|ref|ZP_07809866.1| argininosuccinate synthase [Bacteroides fragilis 3_1_12]
gi|52214689|dbj|BAD47282.1| argininosuccinate synthase [Bacteroides fragilis YCH46]
gi|263254576|gb|EEZ26010.1| argininosuccinate synthase [Bacteroides sp. 2_1_16]
gi|313136440|gb|EFR53800.1| argininosuccinate synthase [Bacteroides fragilis 3_1_12]
Length = 401
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 18/134 (13%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+++ ++ FSGG D S T + A ++ V + G ++ +L+ K+ +
Sbjct: 1 MEQKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGAV 60
Query: 64 MPKWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
D E + L I G++ + + + IF A
Sbjct: 61 KYVTLDVTQEYYEKSLKYMIFGNVLRN---GTYPISVSSER-----------IFQALAIA 106
Query: 122 -LAYRLGITNIVIG 134
A +G I G
Sbjct: 107 RYAKEIGAEAIAHG 120
>gi|154687079|ref|YP_001422240.1| thiamine biosynthesis protein ThiI [Bacillus amyloliquefaciens
FZB42]
gi|189030618|sp|A7Z7N3|THII_BACA2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|154352930|gb|ABS75009.1| ThiI [Bacillus amyloliquefaciens FZB42]
Length = 401
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G HI+P ++ + +N M + L A
Sbjct: 227 AGCLAKFGGSMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ I+ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREERKALAIITGESLGQVAS---------QTLESMYAINAVTATPILRPLIGMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG + E+
Sbjct: 326 EKSKEIGTYETSIQPFEDC 344
>gi|228941828|ref|ZP_04104375.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228974753|ref|ZP_04135319.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981348|ref|ZP_04141648.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis Bt407]
gi|228778548|gb|EEM26815.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis Bt407]
gi|228785156|gb|EEM33169.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818040|gb|EEM64118.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326942433|gb|AEA18329.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 404
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ H++P + + + + +M + + +A
Sbjct: 235 CKRV-TLHLIPFTEVQKTINKEIPSSYSMTVMRRMMMR------------ITEQIAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|126465357|ref|YP_001040466.1| thiamine biosynthesis protein [Staphylothermus marinus F1]
gi|126014180|gb|ABN69558.1| thiamine biosynthesis protein [Staphylothermus marinus F1]
Length = 375
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 63/184 (34%), Gaps = 38/184 (20%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++L SGG DSS +A+ R R+ + D G R++ E + + +
Sbjct: 168 VVLLSGGVDSSLAAWYAMKRGARIIPVFIDLG------KYWSEQARRRFYEALSLVYEWV 221
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR------NIIFLVFAATLAYR 125
D I K ++ + L +T +P R A+ +A +
Sbjct: 222 PWDKI---------------KTYIVRGAEKILESTNIPARLRCLLCKANMYRIASIIADK 266
Query: 126 LGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
IV G S + + L S ++ P+ ++ K E + A
Sbjct: 267 EECLGIVTGEAVGQVAS----------QTLRNLYILSSISPKPIYRPVAFMDKLEIIEQA 316
Query: 185 QDIG 188
+ +G
Sbjct: 317 RKLG 320
>gi|169829584|ref|YP_001699742.1| thiamine biosynthesis protein [Lysinibacillus sphaericus C3-41]
gi|238688204|sp|B1HX36|THII_LYSSC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|168994072|gb|ACA41612.1| Probable thiamine biosynthesis protein [Lysinibacillus sphaericus
C3-41]
Length = 404
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ +LL+ SGG DS + R R+E + F Y +N +E + K+
Sbjct: 174 PVGSNGKSLLMLSGGIDSPVAGYLMMKRGVRLEAIHFFSPPYTSQNSLE-------KVKV 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + H++P + + + NV+M + L A
Sbjct: 227 LANELTKFGANIRLHVIPFTEIQVLIKEKVPSNVSMTTTRR------------MMLKVAD 274
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ +G IV G + + +E+ + ++ + PL+ K E
Sbjct: 275 QVREEIGALAIVTGESLGQVAS---------QTLESLTAINAVTNTPILRPLISSDKLEI 325
Query: 181 WKLAQDIGGQDLVNLILEES 200
+LA+ IG + E+
Sbjct: 326 IELAEQIGTYETSIQPFEDC 345
>gi|117626464|ref|YP_859787.1| hypothetical protein APECO1_2274 [Escherichia coli APEC O1]
gi|218561274|ref|YP_002394187.1| hypothetical protein ECS88_4696 [Escherichia coli S88]
gi|237703781|ref|ZP_04534262.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|283788504|ref|YP_003368369.1| DNA binding protein [Citrobacter rodentium ICC168]
gi|293416236|ref|ZP_06658876.1| hypothetical protein ECDG_03839 [Escherichia coli B185]
gi|300949560|ref|ZP_07163554.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|115515588|gb|ABJ03663.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218368043|emb|CAR05846.1| conserved hypothetical protein [Escherichia coli S88]
gi|226901693|gb|EEH87952.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|282951958|emb|CBG91681.1| putative DNA binding protein [Citrobacter rodentium ICC168]
gi|291432425|gb|EFF05407.1| hypothetical protein ECDG_03839 [Escherichia coli B185]
gi|300451043|gb|EFK14663.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|315289525|gb|EFU48920.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|323950468|gb|EGB46348.1| hypothetical protein ERKG_03146 [Escherichia coli H252]
gi|323955638|gb|EGB51398.1| hypothetical protein ERLG_03130 [Escherichia coli H263]
Length = 439
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 71/221 (32%), Gaps = 25/221 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL---MPKWK 68
+ LFSGG DS+ L +S Y + + + +
Sbjct: 156 VSLFSGGLDSAIGAIDLLAAGRAPLLVSHAYKGDKSRQDQIAEKLSGQFSRFEINADPHI 215
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D + L ++ +++ +I + FVP N F+ A L R
Sbjct: 216 YQGVTDITMRTRSLNFLAFAAVGACAVQEISQQEKIDLFVPE-NG-FISLNAPLTPRR-- 271
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IG T + I +I+ I + + P + K K+ +
Sbjct: 272 ----IGSLSTRTTH-----PHFITSIQK-IFDALGISCQIINPYQFKTKG---KMISECS 318
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ L++ I+E + +C G C C C +R+
Sbjct: 319 NKQLLSKIVESTVSC-----SHWKRMGQQCGVCIPCIIRRA 354
>gi|26250334|ref|NP_756374.1| hypothetical protein c4512 [Escherichia coli CFT073]
gi|26110764|gb|AAN82948.1|AE016769_63 Hypothetical protein c4512 [Escherichia coli CFT073]
Length = 439
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 71/221 (32%), Gaps = 25/221 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL---MPKWK 68
+ LFSGG DS+ L +S Y + + + +
Sbjct: 156 VSLFSGGLDSAIGAIDLLAAGRAPLLVSHAYKGDKSRQDQIAEKLSGQFSRFEINADPHI 215
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D + L ++ +++ +I + FVP N F+ A L R
Sbjct: 216 YQGVTDITMRTRSLNFLAFAAVGACAVQEISQQEKIDLFVPE-NG-FISLNAPLTPRR-- 271
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IG T + I +I+ I + + P + K K+ +
Sbjct: 272 ----IGSLSTRTTH-----PHFITSIQK-IFDALGISCQIINPYQFKTKG---KMISECS 318
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ L++ I+E + +C G C C C +R+
Sbjct: 319 NKQLLSKIVESTVSC-----SHWKRMGQQCGVCIPCIIRRA 354
>gi|46205157|ref|ZP_00048936.2| COG0603: Predicted PP-loop superfamily ATPase [Magnetospirillum
magnetotacticum MS-1]
Length = 178
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 17/142 (11%)
Query: 83 GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSG 142
G +S +L ++ + D + P RN + + A G+T I++G TD
Sbjct: 25 GRLSALALARSRGAQASDLARAPEWWPYRNQMLVTLAGMRFVAEGLTEILLGAIRTD--V 82
Query: 143 YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHT 202
+ D R +R ++ ++L E V V P L E + + +L + +
Sbjct: 83 HADGRAPFLRTVDRLMHL-QEGGVRVMAPARHLSALELVRR------SGIPRSLLGATFS 135
Query: 203 CYLGKRDKRYEWGYGCNSCPAC 224
C + Y C C C
Sbjct: 136 C--------HVMEYACGRCRGC 149
>gi|307297793|ref|ZP_07577599.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotogales
bacterium mesG1.Ag.4.2]
gi|306917053|gb|EFN47435.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotogales
bacterium mesG1.Ag.4.2]
Length = 404
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 68/194 (35%), Gaps = 29/194 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPK 66
ALLL SGG DS A R ++ + F Y + + L + K +
Sbjct: 176 RALLLLSGGIDSPVAGWLAQKRGLDLDAIHFSSPPY--TGERSFDKVLSLAKTLSIYNGG 233
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ L H I V +++ + V R + + A+ +A
Sbjct: 234 REFRLYSMHFTDAQI-----------AVHKHVEERY---SLVCQR-RLMMKIASKIAEAQ 278
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I IV G + + +E + ++ + V PL+ K ET +LA+
Sbjct: 279 RIIAIVTGENLGQVAS---------QTLENLRVIEEQTELIVLRPLLSYDKIETIELAKQ 329
Query: 187 IGGQDLVNLILEES 200
IG + L E+
Sbjct: 330 IGTFETSILPYEDC 343
>gi|158320842|ref|YP_001513349.1| thiamine biosynthesis/tRNA modification protein ThiI [Alkaliphilus
oremlandii OhILAs]
gi|189030617|sp|A8MHS1|THII_ALKOO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|158141041|gb|ABW19353.1| thiamine biosynthesis/tRNA modification protein ThiI [Alkaliphilus
oremlandii OhILAs]
Length = 392
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ALLL SGG DS R +E + F + ++K+++L
Sbjct: 174 PLGTNGKALLLLSGGIDSPVAGWMVGKRGVDIEAIHF-----HSYPFTS-DRAKEKVMDL 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
G + + +L + K + K + + T + R + A +A
Sbjct: 228 AKILSGYCGAFKLYSVNLLP------IQKEINEKCPEEEM--TILSRR--FMMKIAERVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ +V G + T++++ + V PL+ + K + L
Sbjct: 278 LQNDCDALVTGESIGQVAS------QTVKSLNVT---NSAVDLPVFRPLIAMDKVDIIDL 328
Query: 184 AQDIGGQDLVNLILEES 200
+Q I + L E+
Sbjct: 329 SQKIETYETSILPFEDC 345
>gi|15615765|ref|NP_244069.1| thiamin biosynthesis [Bacillus halodurans C-125]
gi|10175826|dbj|BAB06922.1| thiamin biosynthesis [Bacillus halodurans C-125]
Length = 382
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + L R +E + F + ++K+V+L K +
Sbjct: 159 KVLLMLSGGIDSPVAGYYLLKRGVTLEAIHF-----HSPPFTNEK-AKQKVVDLAAKLTN 212
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G+ HI+P L H + N+ M I + L + +A +
Sbjct: 213 FGGQVKLHIVPFTELQKHIHEKVPSNMEMTIMRR------------MMLRISEGIAKKTD 260
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + T+ ++ T + V PL+ + K E +A++I
Sbjct: 261 ALAIATGESLGQVAS------QTLHSMNTINEVTT---TPVLRPLLTMDKEEVITVAKEI 311
Query: 188 GGQDLVNLILEES 200
++ L E+
Sbjct: 312 DTFNISILPYEDC 324
>gi|20140834|sp|Q9K804|THII_BACHD RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
Length = 404
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + L R +E + F + ++K+V+L K +
Sbjct: 181 KVLLMLSGGIDSPVAGYYLLKRGVTLEAIHF-----HSPPFTNEK-AKQKVVDLAAKLTN 234
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G+ HI+P L H + N+ M I + L + +A +
Sbjct: 235 FGGQVKLHIVPFTELQKHIHEKVPSNMEMTIMRR------------MMLRISEGIAKKTD 282
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + T+ ++ T + V PL+ + K E +A++I
Sbjct: 283 ALAIATGESLGQVAS------QTLHSMNTINEVTT---TPVLRPLLTMDKEEVITVAKEI 333
Query: 188 GGQDLVNLILEES 200
++ L E+
Sbjct: 334 DTFNISILPYEDC 346
>gi|242374005|ref|ZP_04819579.1| thiamine biosynthesis protein [Staphylococcus epidermidis
M23864:W1]
gi|242348256|gb|EES39858.1| thiamine biosynthesis protein [Staphylococcus epidermidis
M23864:W1]
Length = 407
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 69/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + + K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHF-----HSPPFTSEK-AKDKVIELTRILSE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R I + A +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQINKVVHPRYTMTST----R-RIMMRVADAFVHKIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + + V PL+ L K + K A++I
Sbjct: 281 AHAIVNGENLGQVAS---------QTLKSMYAINHVTSTPVLRPLLTLDKEDIIKKAKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|330506692|ref|YP_004383120.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanosaeta
concilii GP-6]
gi|328927500|gb|AEB67302.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanosaeta
concilii GP-6]
Length = 399
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 69/192 (35%), Gaps = 30/192 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L + SGG DS + R V L FD + K+ V+++ +W
Sbjct: 185 LAMISGGIDSPVAAWMMMRRGCTVSLLHFD-----SRPYADSIDQSKRCVQVLAEWTCGR 239
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ I + K KIQ + T + R + AA + + G +
Sbjct: 240 KINFI-----------TVPIKKGIEKIQMHYPRATCILCR-RLMYRIAAQVMEKEGALGV 287
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G + + I A + AI V ++ PL+ + K E LA+ IG +
Sbjct: 288 VTGYSMGQVAS---QTAENILAEQAAI------GVPIYHPLIAMDKSEIIDLARKIGTYE 338
Query: 192 LVNLILEESHTC 203
+ + + +C
Sbjct: 339 VTMV----TKSC 346
>gi|256847987|ref|ZP_05553431.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
coleohominis 101-4-CHN]
gi|256715047|gb|EEU30024.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
coleohominis 101-4-CHN]
Length = 406
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 71/197 (36%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +++ SGG DS AL R +E + F Y E L K++
Sbjct: 174 PVGTAGKGMMMLSGGIDSPVAAYLALKRGVSLEMVHF-YSPPYTSE--QALAKAKELTGK 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S+ + P + + + + M IQ + L A +A
Sbjct: 231 LAHYCGSINFIEV-PFTEIQETVKEKVPEGYLMTIQRR------------LMLRLAVEIA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R + G + + +E+ + +++ V P++ K E K+
Sbjct: 278 NRRKGLAVFNGESLGQVAS---------QTMESMRTIEEVTNLPVLRPVLSYDKTEIIKI 328
Query: 184 AQDIGGQDLVNLILEES 200
A++IG DL L E+
Sbjct: 329 AEEIGTYDLSILPYEDC 345
>gi|289578688|ref|YP_003477315.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter italicus Ab9]
gi|289528401|gb|ADD02753.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter italicus Ab9]
Length = 380
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A +L SGG DS + R +E + F + K +
Sbjct: 168 PLGTNGKATVLLSGGIDSPVATWMMMKRGVEIEAVYF-----HSPPYTSERAKDKVVDLC 222
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAA 120
+++ ++ + + ++ ++I + P T + R ++ A
Sbjct: 223 KVLSQYGQKIKLHVV-------------HFTDLQLEIYEKCPPKFTTIIMRRMMM-KIAE 268
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + G ++ G + + IE+ + + PL+ + K E
Sbjct: 269 KIAQQNGSMALITGESLGQVAS---------QTIESLYVTNASVSIPIFRPLIGMDKTEI 319
Query: 181 WKLAQDIGGQDLVNLILEES 200
LAQ IG ++ E+
Sbjct: 320 IDLAQKIGTFEISIRPYEDC 339
>gi|167574982|ref|ZP_02367856.1| hypothetical protein BoklC_34455 [Burkholderia oklahomensis C6786]
Length = 468
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 51/164 (31%), Gaps = 21/164 (12%)
Query: 87 HSSLTKNVAMKIQDNNLPNTFVPGRNI---------IFLVFAATLAYRLGITNIVI---- 133
+ L + + IQ +P + P R +F + AA A G ++I
Sbjct: 190 GNGLKRKTSEHIQYVRVPVSVKPMRRAEPSFRSRPFMFYLLAALGAIESGANKVMIPENG 249
Query: 134 -----G--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G + + + C + + V + P ++ K + D
Sbjct: 250 QGSIGGSLIVTGHEAKHRSCYPGFTAKLSRFVEALTGKRVKFYHPALFETKGAVLRALAD 309
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
+G L S +C + R + C C C LR+
Sbjct: 310 VGEDVRAVLGRHRSCSC-DARLTSRDGQMFHCGVCGNCLLRRTA 352
>gi|327401325|ref|YP_004342164.1| Thiamine biosynthesis protein [Archaeoglobus veneficus SNP6]
gi|327316833|gb|AEA47449.1| Thiamine biosynthesis protein [Archaeoglobus veneficus SNP6]
Length = 196
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 32/186 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L L SGG DS+ L R VE L F G + + + K+ E
Sbjct: 1 MQMKILALLSGGIDSAVACYIMLRRGCSVEYLHFSMG---SASVNKAIRLASKLKEYGGS 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + L + D K L A LA ++
Sbjct: 58 GRIFVIPHSRLIELVPKDRYTCVYCKRG--------------------MLSIAEMLAEKI 97
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ G D G + I + V PL+ K E +A++
Sbjct: 98 GCAALLTG----DSLG-----QVASQTIPNLRAEDAAVRIPVLRPLIGFDKDEIIGIAKE 148
Query: 187 IGGQDL 192
IG ++
Sbjct: 149 IGTYEI 154
>gi|331701258|ref|YP_004398217.1| tRNA sulfurtransferase [Lactobacillus buchneri NRRL B-30929]
gi|329128601|gb|AEB73154.1| tRNA sulfurtransferase [Lactobacillus buchneri NRRL B-30929]
Length = 405
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A ++ SGG DS A+ R +++ + F Y E L K++ ++ K+
Sbjct: 179 RATMMLSGGIDSPVATYLAMKRGVKIDMIHF-YSPPYTGE--QALNKAKQLTSVLGKYSG 235
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
++ + P + + + + M IQ + L AA + T
Sbjct: 236 NIQFIQV-PFTEIQETIKEKVPEGYLMTIQRR------------MMLRIAAQITQNRHCT 282
Query: 130 NIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ G S + +E+ + + + + V PL+ + K E K+++ I
Sbjct: 283 GVFTGEALGQVAS----------QTLESMMAINDVTTMPVLRPLVSMDKTEIIKISKQIK 332
Query: 189 GQDLVNLILEES 200
DL L E+
Sbjct: 333 TYDLSILPFEDC 344
>gi|229198807|ref|ZP_04325502.1| thiamine biosynthesis protein thiI [Bacillus cereus m1293]
gi|228584680|gb|EEK42803.1| thiamine biosynthesis protein thiI [Bacillus cereus m1293]
Length = 223
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 29/190 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKWKDS 70
+L SGG DS + R VE + F + +K + + + K+
Sbjct: 2 VLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKYCKR 56
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + + I+ + ++ + T R +A
Sbjct: 57 VTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERNALA 103
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
I G + + +++ + ++ + PL+ + K E K+A++IG
Sbjct: 104 ITTGESLGQVAS---------QTLDSMHTINEVTNYPIIRPLITMDKLEIIKIAEEIGTY 154
Query: 191 DLVNLILEES 200
D+ E+
Sbjct: 155 DISIRPYEDC 164
>gi|229186906|ref|ZP_04314061.1| thiamine biosynthesis protein thiI [Bacillus cereus BGSC 6E1]
gi|228596643|gb|EEK54308.1| thiamine biosynthesis protein thiI [Bacillus cereus BGSC 6E1]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|229072150|ref|ZP_04205359.1| thiamine biosynthesis protein thiI [Bacillus cereus F65185]
gi|229081900|ref|ZP_04214392.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock4-2]
gi|229180966|ref|ZP_04308301.1| thiamine biosynthesis protein thiI [Bacillus cereus 172560W]
gi|228602523|gb|EEK60009.1| thiamine biosynthesis protein thiI [Bacillus cereus 172560W]
gi|228701488|gb|EEL53982.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock4-2]
gi|228711084|gb|EEL63050.1| thiamine biosynthesis protein thiI [Bacillus cereus F65185]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|229192851|ref|ZP_04319809.1| thiamine biosynthesis protein thiI [Bacillus cereus ATCC 10876]
gi|228590690|gb|EEK48551.1| thiamine biosynthesis protein thiI [Bacillus cereus ATCC 10876]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|83754678|pdb|2C5S|A Chain A, Crystal Structure Of Bacillus Anthracis Thii, A Trna-
Modifying Enzyme Containing The Predicted Rna-Binding
Thump Domain
Length = 413
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 189 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 243
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 244 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 290
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 291 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 341
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 342 GTYDISIRPYEDC 354
>gi|154244361|ref|YP_001415319.1| tRNA-specific 2-thiouridylase MnmA [Xanthobacter autotrophicus Py2]
gi|154158446|gb|ABS65662.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Xanthobacter autotrophicus Py2]
Length = 436
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 56/192 (29%), Gaps = 14/192 (7%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
+ ++ SGG DSS V ++ Y C + I +
Sbjct: 62 STRVVVAMSGGVDSSVVAGLYARAGYDVVGVTLQLYDHGEAAHRRGACCAGQDIYDASEV 121
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYR 125
+ ++L + A P V R + F AT A
Sbjct: 122 ARTLGIPHYVLD---YESRFKEEVIDRFAASYASGVTPIPCVDCNRTVKFRDLLAT-AEE 177
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHV-TVHTPLMWLKKY 178
LG + G PD R RA E A + + + + PL ++K
Sbjct: 178 LGARYLATG-HYVASRALPDGRRGLYRAAEEARDQSYFLYATTAAQLERLRFPLGEMRKA 236
Query: 179 ETWKLAQDIGGQ 190
+ LA + G
Sbjct: 237 DVRALAAEFGLP 248
>gi|324328541|gb|ADY23801.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|229147208|ref|ZP_04275566.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST24]
gi|228636318|gb|EEK92790.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST24]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|229163640|ref|ZP_04291589.1| thiamine biosynthesis protein thiI [Bacillus cereus R309803]
gi|228619890|gb|EEK76767.1| thiamine biosynthesis protein thiI [Bacillus cereus R309803]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|218232220|ref|YP_002369442.1| thiamine biosynthesis protein ThiI [Bacillus cereus B4264]
gi|228923396|ref|ZP_04086684.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228960915|ref|ZP_04122548.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229048354|ref|ZP_04193922.1| thiamine biosynthesis protein thiI [Bacillus cereus AH676]
gi|229112113|ref|ZP_04241656.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock1-15]
gi|229152842|ref|ZP_04281025.1| thiamine biosynthesis protein thiI [Bacillus cereus m1550]
gi|296505116|ref|YP_003666816.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis BMB171]
gi|226703941|sp|B7H703|THII_BACC4 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|218160177|gb|ACK60169.1| thiamine biosynthesis protein ThiI [Bacillus cereus B4264]
gi|228630662|gb|EEK87308.1| thiamine biosynthesis protein thiI [Bacillus cereus m1550]
gi|228671436|gb|EEL26737.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock1-15]
gi|228723079|gb|EEL74456.1| thiamine biosynthesis protein thiI [Bacillus cereus AH676]
gi|228798811|gb|EEM45791.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228836350|gb|EEM81703.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296326168|gb|ADH09096.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis BMB171]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|42783830|ref|NP_981077.1| thiamine biosynthesis protein ThiI [Bacillus cereus ATCC 10987]
gi|81408868|sp|Q72Z85|THII_BACC1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|42739760|gb|AAS43685.1| thiamine biosynthesis protein ThiI [Bacillus cereus ATCC 10987]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|30022722|ref|NP_834353.1| thiamine biosynthesis protein ThiI [Bacillus cereus ATCC 14579]
gi|229129931|ref|ZP_04258897.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-Cer4]
gi|33301700|sp|Q817B1|THII_BACCR RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|29898281|gb|AAP11554.1| Thiamine biosynthesis protein thiI [Bacillus cereus ATCC 14579]
gi|228653622|gb|EEL09494.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-Cer4]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|49187539|ref|YP_030792.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Sterne]
gi|65322018|ref|ZP_00394977.1| COG0301: Thiamine biosynthesis ATP pyrophosphatase [Bacillus
anthracis str. A2012]
gi|118479788|ref|YP_896939.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis str. Al
Hakam]
gi|165869763|ref|ZP_02214421.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0488]
gi|167633806|ref|ZP_02392129.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0442]
gi|167638047|ref|ZP_02396325.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0193]
gi|170685994|ref|ZP_02877217.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0465]
gi|170705487|ref|ZP_02895951.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0389]
gi|177651153|ref|ZP_02933984.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0174]
gi|190569065|ref|ZP_03021965.1| thiamine biosynthesis protein ThiI [Bacillus anthracis
Tsiankovskii-I]
gi|196032869|ref|ZP_03100282.1| thiamine biosynthesis protein ThiI [Bacillus cereus W]
gi|196040790|ref|ZP_03108088.1| thiamine biosynthesis protein ThiI [Bacillus cereus NVH0597-99]
gi|196043841|ref|ZP_03111078.1| thiamine biosynthesis protein ThiI [Bacillus cereus 03BB108]
gi|218905877|ref|YP_002453711.1| thiamine biosynthesis protein ThiI [Bacillus cereus AH820]
gi|225866628|ref|YP_002752006.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
cereus 03BB102]
gi|227817438|ref|YP_002817447.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
anthracis str. CDC 684]
gi|228917293|ref|ZP_04080848.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228929701|ref|ZP_04092718.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935957|ref|ZP_04098767.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948377|ref|ZP_04110660.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229093743|ref|ZP_04224842.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-42]
gi|229124217|ref|ZP_04253409.1| thiamine biosynthesis protein thiI [Bacillus cereus 95/8201]
gi|229604388|ref|YP_002868929.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
anthracis str. A0248]
gi|254687459|ref|ZP_05151315.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str.
CNEVA-9066]
gi|254725022|ref|ZP_05186805.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A1055]
gi|254736759|ref|ZP_05194465.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Western
North America USA6153]
gi|254741796|ref|ZP_05199483.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Kruger
B]
gi|254754606|ref|ZP_05206641.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Vollum]
gi|254757438|ref|ZP_05209465.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str.
Australia 94]
gi|300118479|ref|ZP_07056222.1| thiamine biosynthesis protein ThiI [Bacillus cereus SJ1]
gi|301056155|ref|YP_003794366.1| thiamine biosynthesis protein ThiI [Bacillus anthracis CI]
gi|189030619|sp|A0RJN9|THII_BACAH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|226703939|sp|B7JS23|THII_BACC0 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|254784216|sp|C3PBB3|THII_BACAA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|254784217|sp|C3L9V4|THII_BACAC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|254784218|sp|C1EUZ5|THII_BACC3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|49181466|gb|AAT56842.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Sterne]
gi|118419013|gb|ABK87432.1| thiamine biosynthesis protein [Bacillus thuringiensis str. Al
Hakam]
gi|164714592|gb|EDR20111.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0488]
gi|167513864|gb|EDR89232.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0193]
gi|167530607|gb|EDR93309.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0442]
gi|170129612|gb|EDS98475.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0389]
gi|170670458|gb|EDT21198.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0465]
gi|172082979|gb|EDT68041.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0174]
gi|190559847|gb|EDV13832.1| thiamine biosynthesis protein ThiI [Bacillus anthracis
Tsiankovskii-I]
gi|195994298|gb|EDX58253.1| thiamine biosynthesis protein ThiI [Bacillus cereus W]
gi|196025177|gb|EDX63847.1| thiamine biosynthesis protein ThiI [Bacillus cereus 03BB108]
gi|196028244|gb|EDX66853.1| thiamine biosynthesis protein ThiI [Bacillus cereus NVH0597-99]
gi|218540024|gb|ACK92422.1| thiamine biosynthesis protein ThiI [Bacillus cereus AH820]
gi|225790990|gb|ACO31207.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
cereus 03BB102]
gi|227007059|gb|ACP16802.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
anthracis str. CDC 684]
gi|228659519|gb|EEL15167.1| thiamine biosynthesis protein thiI [Bacillus cereus 95/8201]
gi|228689628|gb|EEL43436.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-42]
gi|228811364|gb|EEM57702.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228823725|gb|EEM69547.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829880|gb|EEM75500.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842334|gb|EEM87427.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229268796|gb|ACQ50433.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
anthracis str. A0248]
gi|298724151|gb|EFI64850.1| thiamine biosynthesis protein ThiI [Bacillus cereus SJ1]
gi|300378324|gb|ADK07228.1| thiamine biosynthesis protein ThiI [Bacillus cereus biovar
anthracis str. CI]
Length = 404
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|30264721|ref|NP_847098.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Ames]
gi|47778341|ref|YP_021542.2| thiamine biosynthesis protein ThiI [Bacillus anthracis str. 'Ames
Ancestor']
gi|33301702|sp|Q81KU0|THII_BACAN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|30259396|gb|AAP28584.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
anthracis str. Ames]
gi|47552046|gb|AAT34017.2| thiamine biosynthesis protein ThiI [Bacillus anthracis str. 'Ames
Ancestor']
Length = 403
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 179 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 233
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 234 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 281 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 331
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 332 GTYDISIRPYEDC 344
>gi|254411984|ref|ZP_05025759.1| hypothetical protein MC7420_5373 [Microcoleus chthonoplastes PCC
7420]
gi|196180950|gb|EDX75939.1| hypothetical protein MC7420_5373 [Microcoleus chthonoplastes PCC
7420]
Length = 478
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 76/248 (30%), Gaps = 52/248 (20%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L+SGG D+ L L + F G N L P ++D L
Sbjct: 157 VALWSGGLDALAGLYSRLQTNHAASFMLFGTGSNNN----VYARQEHVFKALQPSFRDRL 212
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ S SS + + R I+F + A AY +G +
Sbjct: 213 NLCRV-----PIRFSDSSRHQKNKIPR-----------ARGIVFTLLGAAYAYLMGQRVL 256
Query: 132 V-----IGV---------CETDYSGYPDCR---HDTIRAIETAINLGMESHVTVHTPLMW 174
IG D+S R T+ + ++ V P ++
Sbjct: 257 YVYENGIGAINLPYRASAVGLDHS-----RSVHPLTLLMVSDVVSELFGEEFRVRNPFLF 311
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM-- 232
K E + + + +L + +C R + C C +C LR++
Sbjct: 312 WTKAE---MCRALAEDGRSDLP-PLTKSCDSPHRQPQQPIQ--CGYCSSCILRKQALAAS 365
Query: 233 --EFKEKY 238
E + +Y
Sbjct: 366 KIEDRTRY 373
>gi|229076149|ref|ZP_04209117.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock4-18]
gi|229099107|ref|ZP_04230041.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-29]
gi|229105275|ref|ZP_04235924.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-28]
gi|229118137|ref|ZP_04247496.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock1-3]
gi|228665360|gb|EEL20843.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock1-3]
gi|228678201|gb|EEL32429.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-28]
gi|228684335|gb|EEL38279.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-29]
gi|228707012|gb|EEL59217.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock4-18]
Length = 404
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ H++P + + + + +M + + +A
Sbjct: 235 CKRV-TLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMR------------ITEQIAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|315230928|ref|YP_004071364.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
MP]
gi|315183956|gb|ADT84141.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
MP]
Length = 198
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 23/183 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L S G DS + L + V + F K + V+K +L + +
Sbjct: 3 KAVALLSSGIDSPVAIYLMLKKGLEVIPIHF------KQDEGKYKKVQKIWKQLKELYPE 56
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L E ++ + + + M+++ + F A +A G
Sbjct: 57 RLKELVVVDV-----YEYQAPVFEKIMEMKKHKWICVFCKF---TMYRKATEIARENGAL 108
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I+ G D G + ++ + + + + + PL+ L K E K+A+ IG
Sbjct: 109 AIITG----DSLG-----QVASQTLDNLFIISLATDLPILRPLIGLDKEEVIKIAKKIGT 159
Query: 190 QDL 192
D+
Sbjct: 160 FDI 162
>gi|153809012|ref|ZP_01961680.1| hypothetical protein BACCAC_03315 [Bacteroides caccae ATCC 43185]
gi|237715258|ref|ZP_04545739.1| argininosuccinate synthase [Bacteroides sp. D1]
gi|237719636|ref|ZP_04550117.1| argininosuccinate synthase [Bacteroides sp. 2_2_4]
gi|260172095|ref|ZP_05758507.1| argininosuccinate synthase [Bacteroides sp. D2]
gi|262405102|ref|ZP_06081652.1| argininosuccinate synthase [Bacteroides sp. 2_1_22]
gi|293371667|ref|ZP_06618078.1| putative argininosuccinate synthase [Bacteroides ovatus SD CMC 3f]
gi|294644507|ref|ZP_06722264.1| putative argininosuccinate synthase [Bacteroides ovatus SD CC 2a]
gi|294808651|ref|ZP_06767385.1| putative argininosuccinate synthase [Bacteroides xylanisolvens SD
CC 1b]
gi|298482465|ref|ZP_07000651.1| argininosuccinate synthase [Bacteroides sp. D22]
gi|299147458|ref|ZP_07040523.1| argininosuccinate synthase [Bacteroides sp. 3_1_23]
gi|315920406|ref|ZP_07916646.1| argininosuccinate synthase [Bacteroides sp. D2]
gi|149128345|gb|EDM19564.1| hypothetical protein BACCAC_03315 [Bacteroides caccae ATCC 43185]
gi|229444567|gb|EEO50358.1| argininosuccinate synthase [Bacteroides sp. D1]
gi|229450905|gb|EEO56696.1| argininosuccinate synthase [Bacteroides sp. 2_2_4]
gi|262355977|gb|EEZ05067.1| argininosuccinate synthase [Bacteroides sp. 2_1_22]
gi|292633364|gb|EFF51934.1| putative argininosuccinate synthase [Bacteroides ovatus SD CMC 3f]
gi|292640148|gb|EFF58409.1| putative argininosuccinate synthase [Bacteroides ovatus SD CC 2a]
gi|294444090|gb|EFG12823.1| putative argininosuccinate synthase [Bacteroides xylanisolvens SD
CC 1b]
gi|295088136|emb|CBK69659.1| argininosuccinate synthase [Bacteroides xylanisolvens XB1A]
gi|298271444|gb|EFI13019.1| argininosuccinate synthase [Bacteroides sp. D22]
gi|298514736|gb|EFI38620.1| argininosuccinate synthase [Bacteroides sp. 3_1_23]
gi|313694281|gb|EFS31116.1| argininosuccinate synthase [Bacteroides sp. D2]
Length = 402
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 14/133 (10%)
Query: 4 IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K ++ FSGG D S T + A ++ V + G ++ +L+ K+
Sbjct: 1 MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKTNEENAYKLGA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
+ D E + L + + + + IF A
Sbjct: 61 VKYVTLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIAR 108
Query: 122 LAYRLGITNIVIG 134
A +G I G
Sbjct: 109 YANEIGADAIAHG 121
>gi|29349168|ref|NP_812671.1| argininosuccinate synthase [Bacteroides thetaiotaomicron VPI-5482]
gi|253571331|ref|ZP_04848738.1| argininosuccinate synthase [Bacteroides sp. 1_1_6]
gi|298386866|ref|ZP_06996421.1| argininosuccinate synthase [Bacteroides sp. 1_1_14]
gi|29341076|gb|AAO78865.1| argininosuccinate synthase [Bacteroides thetaiotaomicron VPI-5482]
gi|251839284|gb|EES67368.1| argininosuccinate synthase [Bacteroides sp. 1_1_6]
gi|298260540|gb|EFI03409.1| argininosuccinate synthase [Bacteroides sp. 1_1_14]
Length = 402
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 14/133 (10%)
Query: 4 IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K ++ FSGG D S T + A ++ V + G ++ +L+ K+
Sbjct: 1 MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKTNEENAYKLGA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
+ D E + L + + + + IF A
Sbjct: 61 VKYVTLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIAR 108
Query: 122 LAYRLGITNIVIG 134
A +G I G
Sbjct: 109 YANEIGADAIAHG 121
>gi|281412534|ref|YP_003346613.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
naphthophila RKU-10]
gi|281373637|gb|ADA67199.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
naphthophila RKU-10]
Length = 385
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 33/198 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+LL SGG DS +AL R +E+++F +K+ +++ ++
Sbjct: 173 KAVLLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVRDILRVLRE 226
Query: 70 SLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
G HI+ L L ++ ++ + ++ R A +A
Sbjct: 227 FSGGHPLRLHIVNLTKLQLEVKKNVPDKYSLIMYRRSM------FR------IAEKIAEE 274
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G G + + +E ++ + V PL K E + A+
Sbjct: 275 TGAVAFYTGENIGQVAS---------QTLENLWSIESVTTRPVIRPLSGFDKTEIVEKAK 325
Query: 186 DIGGQDLVNLILEESHTC 203
+IG ++ ++ +C
Sbjct: 326 EIGTYEISIKPYQD--SC 341
>gi|170288930|ref|YP_001739168.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
sp. RQ2]
gi|170176433|gb|ACB09485.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
sp. RQ2]
Length = 385
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 33/198 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+LL SGG DS +AL R +E+++F +K+ +++ ++
Sbjct: 173 KAVLLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVRDILRVLRE 226
Query: 70 SLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
G HI+ L L ++ ++ + ++ R A +A
Sbjct: 227 FSGGHPLRLHIVNLTKLQLEVKKNVPDKYSLIMYRRSM------FR------IAEKIAEE 274
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G G + + +E ++ + V PL K E + A+
Sbjct: 275 TGAVAFYTGENIGQVAS---------QTLENLWSIESVTTRPVIRPLSGFDKTEIVEKAK 325
Query: 186 DIGGQDLVNLILEESHTC 203
+IG ++ ++ +C
Sbjct: 326 EIGTYEISIKPYQD--SC 341
>gi|148270124|ref|YP_001244584.1| thiamine biosynthesis protein ThiI [Thermotoga petrophila RKU-1]
gi|147735668|gb|ABQ47008.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
petrophila RKU-1]
Length = 398
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 33/198 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+LL SGG DS +AL R +E+++F +K+ +++ ++
Sbjct: 186 KAVLLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVRDILRVLRE 239
Query: 70 SLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
G HI+ L L ++ ++ + ++ R A +A
Sbjct: 240 FSGGHPLRLHIVNLTKLQLEVKKNVPDKYSLIMYRRSM------FR------IAEKIAEE 287
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G G + + +E ++ + V PL K E + A+
Sbjct: 288 TGAVAFYTGENIGQVAS---------QTLENLWSIESVTTRPVIRPLSGFDKTEIVEKAK 338
Query: 186 DIGGQDLVNLILEESHTC 203
+IG ++ ++ +C
Sbjct: 339 EIGTYEISIKPYQD--SC 354
>gi|222099855|ref|YP_002534423.1| thiamine biosynthesis protein thiI [Thermotoga neapolitana DSM
4359]
gi|221572246|gb|ACM23058.1| thiamine biosynthesis protein thiI [Thermotoga neapolitana DSM
4359]
Length = 428
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 33/198 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+LL SGG DS +AL R +E+++F +K+ +++ ++
Sbjct: 216 RAILLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVKDILRVLRE 269
Query: 70 SLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
G H++ L + S+ ++ + ++ R A +A
Sbjct: 270 FSGGHPLRLHVVNLTQVQLRIKKSVPDKYSLLMYRRSM------FR------IAEKIAEE 317
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ G + + +E ++ + V PL K E + A+
Sbjct: 318 VNAIAFYTGENVGQVAS---------QTLENLWSIESVTTRPVIRPLAGFDKTEIVEKAR 368
Query: 186 DIGGQDLVNLILEESHTC 203
+IG ++ ++ +C
Sbjct: 369 EIGTYEISIKPYQD--SC 384
>gi|126651353|ref|ZP_01723560.1| hypothetical protein BB14905_12325 [Bacillus sp. B14905]
gi|126591882|gb|EAZ85965.1| hypothetical protein BB14905_12325 [Bacillus sp. B14905]
Length = 404
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ +LL+ SGG DS + R R+E + F Y N +E + K+
Sbjct: 174 PVGSNGKSLLMLSGGIDSPVAGYLMMKRGVRLEAIHFFSPPYTSENSLE-------KVKV 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + H++P + + + NV+M + L A
Sbjct: 227 LANELTKFGANIRLHVIPFTEIQVLIKEKVPSNVSMTTTRR------------MMLKVAD 274
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ +G IV G + + +E+ + ++ + PL+ K E
Sbjct: 275 QVREEIGALAIVTGESLGQVAS---------QTLESLTAINAVTNTPILRPLISSDKLEI 325
Query: 181 WKLAQDIGGQDLVNLILEES 200
+LA+ IG + E+
Sbjct: 326 IELAEQIGTYETSIQPFEDC 345
>gi|295399538|ref|ZP_06809520.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
thermoglucosidasius C56-YS93]
gi|294979004|gb|EFG54600.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
thermoglucosidasius C56-YS93]
Length = 401
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS A+ R +E + F ++K+V+L+ K
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVVDLVKKLTT 232
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G HI+P + ++ K V + +L +T R L L R
Sbjct: 233 YGGTIKLHIVPFTEVQQ----AIYKQVPNEY---SLIST----RRA-MLKITDALRQRHR 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +E+ + + + PL+ + K E +A+ I
Sbjct: 281 ALAIVTGESLGQVAS---------QTLESMFVINDVTTTPILRPLVSMDKTEIIAIAKKI 331
Query: 188 GGQDLVNLILEES 200
D+ L E+
Sbjct: 332 DTHDISILPYEDC 344
>gi|312109907|ref|YP_003988223.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. Y4.1MC1]
gi|311215008|gb|ADP73612.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. Y4.1MC1]
Length = 401
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS A+ R +E + F ++K+V+L+ K
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVVDLVKKLTT 232
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G HI+P + ++ K V + +L +T R L L R
Sbjct: 233 YGGTIKLHIVPFTEVQQ----AIYKQVPNEY---SLIST----RRA-MLKITDALRQRHR 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +E+ + + + PL+ + K E +A+ I
Sbjct: 281 ALAIVTGESLGQVAS---------QTLESMFVINDVTTTPILRPLVSMDKTEIIAIAKKI 331
Query: 188 GGQDLVNLILEES 200
D+ L E+
Sbjct: 332 DTHDISILPYEDC 344
>gi|229823005|ref|ZP_04449075.1| hypothetical protein GCWU000282_00298 [Catonella morbi ATCC 51271]
gi|229787818|gb|EEP23932.1| hypothetical protein GCWU000282_00298 [Catonella morbi ATCC 51271]
Length = 404
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 68/191 (35%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
ALL+ SGG DS + R +E + F + + KK+ + ++
Sbjct: 180 RALLMLSGGIDSPVAGYQMMKRGLEIEAVHFASPPYTSPQ---AIEKTKKLTAQLAQYGR 236
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
SL H +P + + + + +M I + L L R
Sbjct: 237 SL-TYHCVPFTEIQEEIKDKVHDDFSMTIMRR------------MMLRVMEALLDRQQAD 283
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G + T++++ AIN V + PL+ + K + A+ IG
Sbjct: 284 AIVTGESLGQVAS------QTLKSM-RAINQVT--SVPILRPLIAVDKNDIIVQAEAIGT 334
Query: 190 QDLVNLILEES 200
++ N E+
Sbjct: 335 YEISNEPFEDC 345
>gi|242398344|ref|YP_002993768.1| ThiI thiamin biosynthesis protein thiI [Thermococcus sibiricus MM
739]
gi|242264737|gb|ACS89419.1| ThiI thiamin biosynthesis protein thiI [Thermococcus sibiricus MM
739]
Length = 208
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 40/201 (19%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L S G DS + L + V + F + E+ VR+ + L + D
Sbjct: 13 KAVALLSSGIDSPVAIYLMLKKGFTVYPIHFM-----QSEVN-HQKVRRIWMRLKELYPD 66
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII-------FLVFAATL 122
SL E + + K + +K + I L+ AA +
Sbjct: 67 SLEELIAVD---AFEYQKPIFDKLIELKKEK------------WICIFCKFSMLMKAAEI 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A I+ G D G + ++ + + + + + V PL+ + K E K
Sbjct: 112 AKEKNAMVIITG----DSLG-----QVASQTLDNLLIISLATDLPVLRPLIGMDKVEIEK 162
Query: 183 LAQDIGGQDLVNLILEESHTC 203
+A++IG ++ E +C
Sbjct: 163 IAKEIGTFEISIEPEE---SC 180
>gi|84685921|ref|ZP_01013817.1| hypothetical protein 1099457000261_RB2654_14420 [Maritimibacter
alkaliphilus HTCC2654]
gi|84666014|gb|EAQ12488.1| hypothetical protein RB2654_14420 [Rhodobacterales bacterium
HTCC2654]
Length = 616
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 73/232 (31%), Gaps = 42/232 (18%)
Query: 12 LLLFSGGQDS-STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L+FSGG DS + L +R +RV +S + + R+ L K+ ++
Sbjct: 156 VLMFSGGLDSFAGALEEIAERGERVALVS------HFSASKIAPVQRQLHKTLTEKFGEN 209
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + ++G + R+ +F A A G+
Sbjct: 210 SCRHIPVQVQMVGRGLKEGTHR-----------------ARSFLFAALGAVTARAFGLNR 252
Query: 131 IVI---GVCETDYS------GYPDCR---HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
+ GV + S G R T+ + S + P W K
Sbjct: 253 VSFFENGVVSLNLSPVGNVLGTRATRTTHPQTLSRFSDFLGRVFASETRIDNPFFWRTKK 312
Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
E + +G + + ++ +C + + C C C R+
Sbjct: 313 EVVETVARLGMSEQ----IAQTRSC--ADVHNQTKQHIHCGRCSQCIDRRFA 358
>gi|47565062|ref|ZP_00236105.1| thiamine biosynthesis protein ThiI [Bacillus cereus G9241]
gi|52140860|ref|YP_085969.1| thiamine biosynthesis protein ThiI [Bacillus cereus E33L]
gi|228987898|ref|ZP_04148006.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229158255|ref|ZP_04286322.1| thiamine biosynthesis protein thiI [Bacillus cereus ATCC 4342]
gi|81685899|sp|Q633E8|THII_BACCZ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|47557848|gb|EAL16173.1| thiamine biosynthesis protein ThiI [Bacillus cereus G9241]
gi|51974329|gb|AAU15879.1| thiamine biosynthesis protein [Bacillus cereus E33L]
gi|228625213|gb|EEK81973.1| thiamine biosynthesis protein thiI [Bacillus cereus ATCC 4342]
gi|228771821|gb|EEM20279.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 404
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G ++ E+
Sbjct: 333 GTYEISIRPYEDC 345
>gi|307719269|ref|YP_003874801.1| thiamine biosynthesis protein ThiI [Spirochaeta thermophila DSM
6192]
gi|306532994|gb|ADN02528.1| probable thiamine biosynthesis protein ThiI [Spirochaeta
thermophila DSM 6192]
Length = 393
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 62/197 (31%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + + +LL SGG DS R L Y + + + +
Sbjct: 171 PVGSSGTGMLLLSGGIDSPVAGYLMAKRG---LALHAAYFHTYPYTSDDARKKVETLAAI 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +W + + I+ + + + ++ + A LA
Sbjct: 228 LSRWTGRVDLHVVPFTEAQIHINRHARKNEITLHMRAA-------------MVRIATILA 274
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+G + ++ G + + E+ + + V PL+ + K E L
Sbjct: 275 GRVGASCLITGESLGQVAS---------QTAESMRFTQHTTDLPVFRPLVGMDKQEIIAL 325
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + L +
Sbjct: 326 ARRIGTFETSILPYADC 342
>gi|15644442|ref|NP_229494.1| thiamine biosynthesis protein ThiI [Thermotoga maritima MSB8]
gi|6686039|sp|Q9X220|THII_THEMA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|4982270|gb|AAD36761.1|AE001809_13 thiamin biosynthesis protein ThiI [Thermotoga maritima MSB8]
Length = 388
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 33/198 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+LL SGG DS +AL R +E+++F +K+ +++ ++
Sbjct: 176 KAVLLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVRDILRVLRE 229
Query: 70 SLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
G HI+ L L + ++ + ++ R A +A
Sbjct: 230 FSGGHPLRLHIVNLTKLQLEVKKRVPDKYSLIMYRRSM------FR------IAEKIAEE 277
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G G + + +E ++ + V PL K E + A+
Sbjct: 278 TGAVAFYTGENIGQVAS---------QTLENLWSIESVTTRPVIRPLSGFDKTEIVEKAK 328
Query: 186 DIGGQDLVNLILEESHTC 203
+IG ++ ++ +C
Sbjct: 329 EIGTYEISIKPYQD--SC 344
>gi|162454373|ref|YP_001616740.1| hypothetical protein sce6096 [Sorangium cellulosum 'So ce 56']
gi|161164955|emb|CAN96260.1| hypothetical protein sce6096 [Sorangium cellulosum 'So ce 56']
Length = 435
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 86/240 (35%), Gaps = 35/240 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+A+ LFSGG DS L+ R RV + Y + + L +
Sbjct: 116 NAVCLFSGGVDSLIGAINLLESDRKSRVVLVG-HYDSTHTPGTQK---------VLADEL 165
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G++ +LPL +L + ++ + + R+++FL +A LG
Sbjct: 166 IQEYGDERVLPLRVL---VRPAPIRDGVQAYPLPAVKESTTRSRSLVFLGLGMAVAAALG 222
Query: 128 -ITNIVI---GVCE----TDYSGYPDCR-----HDTIRAIETAIN-LGMESHVTVHTPLM 173
+ I G S C + I A+ +G+++ + P +
Sbjct: 223 PAVPLYIPENGFIAINVPLHGSRVGSCSTRTTHPYFLDRIANALGVVGVKNP--IVNPYV 280
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYLRQKGWM 232
+ K E + + QDL+ + + +C +R + + C C C +R+ +
Sbjct: 281 YKTKGEMVR---ECKNQDLLRRVAHITVSCAHPERKQNETNTWPNCGYCYPCLIRRAAFN 337
>gi|320528310|ref|ZP_08029472.1| thiamine biosynthesis/tRNA modification protein ThiI [Solobacterium
moorei F0204]
gi|320131224|gb|EFW23792.1| thiamine biosynthesis/tRNA modification protein ThiI [Solobacterium
moorei F0204]
Length = 394
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R VE + F + K++EL + +
Sbjct: 177 KVLLMLSGGIDSPVAAYQLMKRGLHVEAVHF------ASPPYTSENAKNKVLELASQVSE 230
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G + + T+ + P R ++F A ++ + G
Sbjct: 231 YQGHMKVHVVNF---------TQLQLEIYKHAGDPYAVTLMRRMMF-RLADMISKKYGCL 280
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I G + T+ +I + +++ + PL+ K E LA+ IG
Sbjct: 281 AIGTGESVGQVAS------QTLESIN---CINTVTNMPILRPLVCYDKIEIIDLARKIGT 331
Query: 190 QDLVNLILEES 200
+ L E+
Sbjct: 332 YETSILPFEDC 342
>gi|288932377|ref|YP_003436437.1| thiamine biosynthesis/tRNA modification protein ThiI [Ferroglobus
placidus DSM 10642]
gi|288894625|gb|ADC66162.1| thiamine biosynthesis/tRNA modification protein ThiI [Ferroglobus
placidus DSM 10642]
Length = 369
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 42/199 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ SGG DS A+ R V + F + + VRKKI++L +
Sbjct: 162 KVVAQISGGIDSPVAAFLAMKRGAEVIAVHFFNQTLHSPQ------VRKKILDL----AE 211
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L E H + L ++ + + + I + R + + +A +
Sbjct: 212 KLSEFHKVKLYMVPF---EEVQREIIRVIPAKYRMIVY---RRSMM-RMSNVIAKKENAK 264
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETW 181
IV G ++ + +++ +++ PL+ K ET
Sbjct: 265 AIVTG-----------------DSLSQVASQTLDNIRVIYSASELPVLPPLIGFDKEETI 307
Query: 182 KLAQDIGGQDLVNLILEES 200
++A+ IG ++ L E+
Sbjct: 308 EIAKKIGTYEISILPYEDC 326
>gi|311069444|ref|YP_003974367.1| thiamine biosynthesis protein ThiI [Bacillus atrophaeus 1942]
gi|310869961|gb|ADP33436.1| thiamine biosynthesis protein ThiI [Bacillus atrophaeus 1942]
Length = 401
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVIDL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G+ HI+P ++ + +N M + L A
Sbjct: 227 AGGLSKFGGKMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + ++ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREQRKGLALITGESLGQVAS---------QTLESMYAINAVTSTPILRPLIGMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG D E+
Sbjct: 326 EKSREIGTYDTSIQPFEDC 344
>gi|118618570|ref|YP_906902.1| hypothetical protein MUL_3215 [Mycobacterium ulcerans Agy99]
gi|118570680|gb|ABL05431.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length = 420
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 75/249 (30%), Gaps = 61/249 (24%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
P A+ L SGG DS LS A+ + LS + R+ W
Sbjct: 134 PDAVSLLSGGLDS---LSGAVLKGAPGLFLS------HTDNPTVTGAQRRTW-----NWL 179
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S G + +S + ++ + R ++F A LA GI
Sbjct: 180 TSNGVE-----GECVRLSLNEASRKRENTTRT----------RALLFYALAVALADARGI 224
Query: 129 TNI------VIGVC---ETDYSGYPDCR---HDTIRAIETAINLGMESHVTVHTPLMWLK 176
+ G+ D G R T+ ++ ++ + + P W
Sbjct: 225 DRVEVSENGFTGLNLSLGNDRGGVLSTRSTHPWTMHLMQRLLDDA-GIDIELVNPYEWQT 283
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTC-------YLGKRDKRYEWGYGCNSCPACY---- 225
K E + A D+ L+ + +C Y G C C AC
Sbjct: 284 KGELVRAAADVCPAFAEGLV--TTLSCAKLDGRTYKGGNPNLN-----CGLCVACLTRRA 336
Query: 226 -LRQKGWME 233
+R G +
Sbjct: 337 SIRAAGLED 345
>gi|240140914|ref|YP_002965394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium extorquens AM1]
gi|254563424|ref|YP_003070519.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium extorquens DM4]
gi|240010891|gb|ACS42117.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium extorquens AM1]
gi|254270702|emb|CAX26706.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium extorquens DM4]
Length = 410
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 61/197 (30%), Gaps = 32/197 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y + C + I + +
Sbjct: 39 RVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACCAGRDIHDARAVAE 98
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D S+ A P N V R+++ L
Sbjct: 99 TLGIPHYVLD---YEDRFRESVIDRFAESYLSGETPIPCVECNRSVKFRDLL------GL 149
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------P 171
A LG + G + R + RA+ A++ + ++ P
Sbjct: 150 ARELGAEALATGHYVASRA-----RPEGGRALYRALDPARDQSYFLYATTPEQLAYLRFP 204
Query: 172 LMWLKKYETWKLAQDIG 188
L K ET LA+++G
Sbjct: 205 LGERPKDETRALARELG 221
>gi|325529396|gb|EGD06318.1| hypothetical protein B1M_02050 [Burkholderia sp. TJI49]
Length = 468
Score = 55.2 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 34/106 (32%), Gaps = 5/106 (4%)
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G + IV G S YP + + V + P ++ K +
Sbjct: 252 SIGGSLIVTGHEAKHRSCYP----GFTAKLSRFVEALTGKRVKFYHPALFETKGAVLRAL 307
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D G L S +C + R + + C C C LR+
Sbjct: 308 ADAGEDVRAVLGRHRSCSC-DARLTSRDKQMFHCGVCGNCLLRRAA 352
>gi|158425974|ref|YP_001527266.1| tRNA-specific 2-thiouridylase MnmA [Azorhizobium caulinodans ORS
571]
gi|172047846|sp|A8HVS0|MNMA_AZOC5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|158332863|dbj|BAF90348.1| TRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Azorhizobium caulinodans ORS 571]
Length = 390
Score = 55.2 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 63/197 (31%), Gaps = 24/197 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
+ ++ SGG DSS V ++ Y Q + C + I +
Sbjct: 14 STRVVVAMSGGVDSSVVAGLLARAGFDVVGVTLQLYDQGEAARRKGACCAGQDIYD-ARD 72
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP------GRNIIFLVFAA 120
D LG H + + + S + ++ ++ F P R + F A
Sbjct: 73 VADRLGIPHYV-------LDYESRFREEVIERFADSYAAGFTPIPCVDCNRTVKFRDLLA 125
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLM 173
T A LG + + G PD R RA E + PL
Sbjct: 126 T-AEDLGASVLATG-HYVASRALPDGRRGLFRAAEENRDQSYFLYATTQAQATKLRFPLG 183
Query: 174 WLKKYETWKLAQDIGGQ 190
++K + LA ++G
Sbjct: 184 GMRKSDVRALAAELGLP 200
>gi|205829088|sp|A7ICB9|MNMA_XANP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 389
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 55/190 (28%), Gaps = 14/190 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y C + I + +
Sbjct: 17 RVVVAMSGGVDSSVVAGLYARAGYDVVGVTLQLYDHGEAAHRRGACCAGQDIYDASEVAR 76
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYRLG 127
++L + A P V R + F AT A LG
Sbjct: 77 TLGIPHYVLD---YESRFKEEVIDRFAASYASGVTPIPCVDCNRTVKFRDLLAT-AEELG 132
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHV-TVHTPLMWLKKYET 180
+ G PD R RA E A + + + + PL ++K +
Sbjct: 133 ARYLATG-HYVASRALPDGRRGLYRAAEEARDQSYFLYATTAAQLERLRFPLGEMRKADV 191
Query: 181 WKLAQDIGGQ 190
LA + G
Sbjct: 192 RALAAEFGLP 201
>gi|167762029|ref|ZP_02434156.1| hypothetical protein BACSTE_00375 [Bacteroides stercoris ATCC
43183]
gi|167700121|gb|EDS16700.1| hypothetical protein BACSTE_00375 [Bacteroides stercoris ATCC
43183]
Length = 401
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 14/132 (10%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++K ++ FSGG D S T + A ++ V + G + +L+ K+ +
Sbjct: 1 MEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAV 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L + + + + IF A
Sbjct: 61 KYITLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARY 108
Query: 123 AYRLGITNIVIG 134
A +G I G
Sbjct: 109 ANEIGADAIAHG 120
>gi|75760755|ref|ZP_00740776.1| Thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899802|ref|YP_002448213.1| thiamine biosynthesis protein ThiI [Bacillus cereus G9842]
gi|228903166|ref|ZP_04067300.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis IBL
4222]
gi|228910473|ref|ZP_04074288.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis IBL 200]
gi|226703940|sp|B7IK47|THII_BACC2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|74491755|gb|EAO54950.1| Thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218545007|gb|ACK97401.1| thiamine biosynthesis protein ThiI [Bacillus cereus G9842]
gi|228849239|gb|EEM94078.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis IBL 200]
gi|228856448|gb|EEN00974.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis IBL
4222]
Length = 404
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 64/193 (33%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++L SGG DS + R VE + F + ++K+++L
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSE-RAKQKVIDLAQGLTK 233
Query: 70 --SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
H++P + + + + +M + + +A
Sbjct: 234 YCKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMR------------ITEQIAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|206969922|ref|ZP_03230876.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
cereus AH1134]
gi|206735610|gb|EDZ52778.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
cereus AH1134]
Length = 404
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G ++ E+
Sbjct: 333 GTYNISIRPYEDC 345
>gi|315186810|gb|EFU20568.1| thiamine biosynthesis/tRNA modification protein ThiI [Spirochaeta
thermophila DSM 6578]
Length = 394
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 63/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
+ + + +LL SGG DS R + F + + + +
Sbjct: 171 PVGSSGTGMLLLSGGIDSPVAGYLMAKRGLSLHAAYF-----HTYPYTSDDARKKVETLA 225
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ +W + + I+ + + + ++ + A
Sbjct: 226 AILSRWTGRVVLHVVPFTEAQIHINRHARKNEITLHMRAA-------------MVRIATI 272
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA R+G + ++ G + + E+ + + + PL+ + K E
Sbjct: 273 LAGRVGASCLITGESLGQVAS---------QTAESMRFTQHTTDLPIFRPLVGMDKQEII 323
Query: 182 KLAQDIGGQDLVNLILEES 200
LA+ IG + L +
Sbjct: 324 ALARRIGTFETSILPYADC 342
>gi|255514114|gb|EET90377.1| thiamine biosynthesis protein [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 395
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 66/194 (34%), Gaps = 34/194 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
A++L SGG DS +A+ R V L Y + + ++ + K +
Sbjct: 177 RAVVLLSGGIDSPVAAFYAMRRGFDVVYLHIHGYDDPHTAMASKMHELVGQLAKYSGKTR 236
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
HI +A +G S+ + V + I+L + +A + I
Sbjct: 237 VYYAPFHIFQMAAMG----SAPRYEL-------------VLFKRFIYL-LSEKMADEMNI 278
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETWKLAQ 185
IV G A +T NLG H PL+ K E ++A+
Sbjct: 279 DAIVTGESLGQV------------ASQTVSNLGSAQSGVRHLIFRPLIGFDKNEIIEMAR 326
Query: 186 DIGGQDLVNLILEE 199
IG D+ +
Sbjct: 327 RIGTYDISIKPYRD 340
>gi|229032299|ref|ZP_04188272.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1271]
gi|228729079|gb|EEL80082.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1271]
Length = 404
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTDVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|218532352|ref|YP_002423168.1| tRNA-specific 2-thiouridylase MnmA [Methylobacterium
chloromethanicum CM4]
gi|218524655|gb|ACK85240.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium chloromethanicum CM4]
Length = 410
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 61/197 (30%), Gaps = 32/197 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y + C + I + +
Sbjct: 39 RVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACCAGRDIHDARAVAE 98
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D S+ A P N V R+++ L
Sbjct: 99 TLGIPHYVLD---YEDRFRESVIDRFADSYLSGETPIPCVECNRSVKFRDLL------GL 149
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------P 171
A LG + G + R + RA+ A++ + ++ P
Sbjct: 150 ARELGAEALATGHYVASRA-----RPEGGRALYRALDPARDQSYFLYATTPEQLAYLRFP 204
Query: 172 LMWLKKYETWKLAQDIG 188
L K ET LA+++G
Sbjct: 205 LGERPKDETRALARELG 221
>gi|321312495|ref|YP_004204782.1| thiamine biosynthesis protein ThiI [Bacillus subtilis BSn5]
gi|320018769|gb|ADV93755.1| thiamine biosynthesis protein ThiI [Bacillus subtilis BSn5]
Length = 401
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G HI+P ++ + +N M + L A
Sbjct: 227 AKCLSRFGGSMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + I+ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREKRNGLAIITGESLGQVAS---------QTLESMYAINAVTSTPILRPLIAMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG + E+
Sbjct: 326 EKSREIGTYETSIQPFEDC 344
>gi|296332065|ref|ZP_06874529.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675540|ref|YP_003867212.1| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
and tRNA modification [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296150836|gb|EFG91721.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413784|gb|ADM38903.1| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
and tRNA modification [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 401
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G HI+P ++ + +N M + L A
Sbjct: 227 AKCLSRFGGSMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + I+ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREKRNGLAIITGESLGQVAS---------QTLESMYAINAVTSTPILRPLIAMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG + E+
Sbjct: 326 EKSREIGTYETSIQPFEDC 344
>gi|255767679|ref|NP_390836.2| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
subtilis str. 168]
gi|251757346|sp|O34595|THII_BACSU RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|225185307|emb|CAB14936.2| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
and tRNA modification [Bacillus subtilis subsp. subtilis
str. 168]
Length = 401
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G HI+P ++ + +N M + L A
Sbjct: 227 AKCLSRFGGSMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + I+ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREKRNGLAIITGESLGQVAS---------QTLESMYAINAVTSTPILRPLIAMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG + E+
Sbjct: 326 EKSREIGTYETSIQPFEDC 344
>gi|221315228|ref|ZP_03597033.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
Length = 379
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G HI+P ++ + +N M + L A
Sbjct: 227 AKCLSRFGGSMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + I+ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREKRNGLAIITGESLGQVAS---------QTLESMYAINAVTSTPILRPLIAMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG + E+
Sbjct: 326 EKSREIGTYETSIQPFEDC 344
>gi|221310902|ref|ZP_03592749.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
subtilis str. 168]
gi|221320146|ref|ZP_03601440.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324427|ref|ZP_03605721.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 379
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G HI+P ++ + +N M + L A
Sbjct: 227 AKCLSRFGGSMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + I+ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREKRNGLAIITGESLGQVAS---------QTLESMYAINAVTSTPILRPLIAMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG + E+
Sbjct: 326 EKSREIGTYETSIQPFEDC 344
>gi|2293230|gb|AAC00308.1| YtbJ [Bacillus subtilis]
Length = 358
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G HI+P ++ + +N M + L A
Sbjct: 227 AKCLSRFGGSMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + I+ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREKRNGLAIITGESLGQVAS---------QTLESMYAINAVTSTPILRPLIAMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG + E+
Sbjct: 326 EKSREIGTYETSIQPFEDC 344
>gi|312135343|ref|YP_004002681.1| thiamine biosynthesis/tRNA modification protein thii
[Caldicellulosiruptor owensensis OL]
gi|311775394|gb|ADQ04881.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor owensensis OL]
Length = 392
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R +E + F Y E + + +++ K+ D
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHF-YSFPYTGEKAKEKVI--DLCKVLAKYTD 237
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I I + + + + ++ + A +A + G
Sbjct: 238 KIKLYIVPFTEIQLSIYENCDERYLTIIMRR-------------FMMRIAQKIAMQNGGL 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + + +E+ + V PL+ + K E KLA+ IG
Sbjct: 285 ALITGESIGQVAS---------QTMESLFCTQAAVSMPVFRPLIGMDKEEIIKLAKRIGT 335
Query: 190 QDLVNLILEES 200
D+ L E+
Sbjct: 336 YDISILPYEDC 346
>gi|255692370|ref|ZP_05416045.1| argininosuccinate synthase [Bacteroides finegoldii DSM 17565]
gi|260621836|gb|EEX44707.1| argininosuccinate synthase [Bacteroides finegoldii DSM 17565]
Length = 402
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 14/133 (10%)
Query: 4 IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K ++ FSGG D S T + A ++ V + G + +L+ K+
Sbjct: 1 MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSAEQLKTNEENAYKLGA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
+ D E + L + + + + IF A
Sbjct: 61 VKYVTLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIAR 108
Query: 122 LAYRLGITNIVIG 134
A +G I G
Sbjct: 109 YANEIGADAIAHG 121
>gi|229087209|ref|ZP_04219356.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-44]
gi|228696090|gb|EEL48928.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-44]
Length = 403
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAFLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L + + I+ + ++ + T R +A
Sbjct: 235 CKRLTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A +I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIANEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|315038027|ref|YP_004031595.1| thiamine biosynthesis protein ThiI [Lactobacillus amylovorus GRL
1112]
gi|325956479|ref|YP_004291891.1| thiamine biosynthesis protein ThiI [Lactobacillus acidophilus 30SC]
gi|312276160|gb|ADQ58800.1| thiamine biosynthesis protein ThiI [Lactobacillus amylovorus GRL
1112]
gi|325333044|gb|ADZ06952.1| thiamine biosynthesis protein ThiI [Lactobacillus acidophilus 30SC]
gi|327183307|gb|AEA31754.1| thiamine biosynthesis protein ThiI [Lactobacillus amylovorus GRL
1118]
Length = 405
Score = 54.8 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 70/200 (35%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R +E + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVDIEMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + P A + + L + M +Q L A
Sbjct: 227 TGILANYAGKINFIAV-PFAEIQETIKEKLPEGYLMTVQRR------------FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ + G I G + + +++ + + + V P+ + K E
Sbjct: 274 RIRAKRGGLAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+DIG DL E+
Sbjct: 325 IKLAEDIGTFDLSIQPFEDC 344
>gi|260102594|ref|ZP_05752831.1| thiamine biosynthesis protein ThiI [Lactobacillus helveticus DSM
20075]
gi|260083621|gb|EEW67741.1| thiamine biosynthesis protein ThiI [Lactobacillus helveticus DSM
20075]
gi|323466843|gb|ADX70530.1| Probable tRNA sulfurtransferase [Lactobacillus helveticus H10]
Length = 405
Score = 54.8 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 70/200 (35%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R +E + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVDIEMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + P A + + L + M +Q L A
Sbjct: 227 TGILANYAGKINFIAV-PFAEIQETIKEKLPEGYLMTVQRR------------FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ + G I G + + +++ + + + V P+ + K E
Sbjct: 274 RIRAKRGGLAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+DIG DL E+
Sbjct: 325 IKLAEDIGTFDLSIQPFEDC 344
>gi|160885588|ref|ZP_02066591.1| hypothetical protein BACOVA_03590 [Bacteroides ovatus ATCC 8483]
gi|156109210|gb|EDO10955.1| hypothetical protein BACOVA_03590 [Bacteroides ovatus ATCC 8483]
Length = 402
Score = 54.8 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 14/133 (10%)
Query: 4 IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K ++ FSGG D S T + A ++ V + G ++ +L+ K+
Sbjct: 1 MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKTNEENAYKLGA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
D E + L + + + + IF A
Sbjct: 61 TKYVTIDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIAR 108
Query: 122 LAYRLGITNIVIG 134
A +G I G
Sbjct: 109 YANEIGADAIAHG 121
>gi|227535265|ref|ZP_03965314.1| thiamine-phosphate kinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227187149|gb|EEI67216.1| thiamine-phosphate kinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 405
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A L+ SGG DS +AL R +E + F K +L
Sbjct: 173 PVGTAGKAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K +G + + + + + + + K+ + L V R + L +A
Sbjct: 227 TAKLTPYVGRIYFIEVPF------TEIQEEIKAKVPEGYLMT--VQRR--LMLRLTEAIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +E+ + + + + P+ + K E
Sbjct: 277 QQRGDLAIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAE 327
Query: 184 AQDIGGQDLVNLILEES 200
A+ I DL + E+
Sbjct: 328 AEKIDTYDLSIMPFEDC 344
>gi|239631665|ref|ZP_04674696.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|301066299|ref|YP_003788322.1| thiamine biosynthesis AtP pyrophosphatase [Lactobacillus casei str.
Zhang]
gi|239526130|gb|EEQ65131.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|300438706|gb|ADK18472.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus casei str.
Zhang]
Length = 405
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A L+ SGG DS +AL R +E + F K +L
Sbjct: 173 PVGTAGKAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K +G + + + + + + + K+ + L V R + L +A
Sbjct: 227 TAKLTPYVGRIYFIEVPF------TEIQEEIKAKVPEGYLMT--VQRR--LMLRLTEAIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +E+ + + + + P+ + K E
Sbjct: 277 QQRGDLAIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAE 327
Query: 184 AQDIGGQDLVNLILEES 200
A+ I DL + E+
Sbjct: 328 AEKIDTYDLSIMPFEDC 344
>gi|191638252|ref|YP_001987418.1| thiamine biosynthesis protein ThiI [Lactobacillus casei BL23]
gi|238693031|sp|B3WDV9|THII_LACCB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|190712554|emb|CAQ66560.1| Thiamine biosynthesis ATP pyrophosphorylase [Lactobacillus casei
BL23]
gi|327382282|gb|AEA53758.1| Probable tRNA sulfurtransferase [Lactobacillus casei LC2W]
gi|327385478|gb|AEA56952.1| Probable tRNA sulfurtransferase [Lactobacillus casei BD-II]
Length = 405
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A L+ SGG DS +AL R +E + F K +L
Sbjct: 173 PVGTAGKAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K +G + + + + + + + K+ + L V R + L +A
Sbjct: 227 TAKLTPYVGRIYFIEVPF------TEIQEEIKAKVPEGYLMT--VQRR--LMLRLTEAIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +E+ + + + + P+ + K E
Sbjct: 277 QQRGDLAIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAE 327
Query: 184 AQDIGGQDLVNLILEES 200
A+ I DL + E+
Sbjct: 328 AEKIDTYDLSIMPFEDC 344
>gi|116494740|ref|YP_806474.1| thiamine biosynthesis protein ThiI [Lactobacillus casei ATCC 334]
gi|122263842|sp|Q039U0|THII_LACC3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|116104890|gb|ABJ70032.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus casei ATCC
334]
Length = 405
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A L+ SGG DS +AL R +E + F K +L
Sbjct: 173 PVGTAGKAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K +G + + + + + + + K+ + L V R + L +A
Sbjct: 227 TAKLTPYVGRIYFIEVPF------TEIQEEIKAKVPEGYLMT--VQRR--LMLRLTEAIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +E+ + + + + P+ + K E
Sbjct: 277 QQRGDLAIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAE 327
Query: 184 AQDIGGQDLVNLILEES 200
A+ I DL + E+
Sbjct: 328 AEKIDTYDLSIMPFEDC 344
>gi|83589067|ref|YP_429076.1| thiamine biosynthesis protein ThiI [Moorella thermoacetica ATCC
39073]
gi|123525192|sp|Q2RM06|THII_MOOTA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|83571981|gb|ABC18533.1| Thiamine biosynthesis [Moorella thermoacetica ATCC 39073]
Length = 390
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LLL SGG DS + R + L F + ++K+++L
Sbjct: 175 RGLLLISGGIDSPVAGYMGMKRGLELTALHF-----HSFPFTSERS-KEKVIDLCRVLAG 228
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G ++ + N+ I+ N +V + A +A +
Sbjct: 229 YSGPLRLVV----------APFTNIQKAIRQNCPQEFYVTIMRRMMFRIARAVAAKEEAP 278
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I+ G + + +++ + + V PL+ K E ++A+ IG
Sbjct: 279 AILTGESLGQVAS---------QTLQSMAVINKVVDLPVLRPLVAWDKSEIIEVARRIGT 329
Query: 190 QDLVNLILEES 200
D+ E+
Sbjct: 330 YDISIRPYEDC 340
>gi|37526660|ref|NP_930004.1| hypothetical protein plu2770 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786092|emb|CAE15144.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 510
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 42/133 (31%), Gaps = 12/133 (9%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A + +SF +E+ R C I ++ +
Sbjct: 233 IMFSGGIDSTIVLYLAKKYHHDITAISFGLPGSKDIEIAQRYCTENNIKHIIYTFTQEEL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++I G+ + + + N + A G I
Sbjct: 293 INNIQDAIYYGEFFEQIDAIDSTIAHFGYYIA-------NRLGFKIALC---GEGSDEIF 342
Query: 133 IGVCETDYSGYPD 145
G + YPD
Sbjct: 343 AGYDL--FKTYPD 353
>gi|315652515|ref|ZP_07905499.1| thiamine biosynthesis protein ThiI [Eubacterium saburreum DSM 3986]
gi|315485231|gb|EFU75629.1| thiamine biosynthesis protein ThiI [Eubacterium saburreum DSM 3986]
Length = 394
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R RVE + F + RK ++
Sbjct: 176 PVGTNGRAMLLLSGGIDSPVAGYMIAKRGVRVEAVYF-----HAPPYTSERAKRKVIELA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ + L I I I + + + ++ + A
Sbjct: 231 QLVAMYNGPLNLHIINFTDIQLAIYENCPHDELTIIMRRY-------------MMKIAER 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A G ++ G + + I++ + + + V PL+ K E
Sbjct: 278 IAVENGDQALITGESIGQVAS---------QTIQSLFSTDAAATLPVFRPLIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ IG + E+
Sbjct: 329 EISEKIGTYETSIQPYEDC 347
>gi|239828051|ref|YP_002950675.1| thiamine biosynthesis protein ThiI [Geobacillus sp. WCH70]
gi|259518562|sp|C5D693|THII_GEOSW RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|239808344|gb|ACS25409.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. WCH70]
Length = 401
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A+ R +E + F ++K+++L
Sbjct: 173 PVGSSGKAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSDRAKQKVIDL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ K G+ HI+P + ++ + ++ L
Sbjct: 227 VKKLTTYGGKIKLHIVPFTEVQQAIYTQVPNEYSLISTRRA------------MLKITDA 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L R IV G + + +E+ + + + PL+ + K E
Sbjct: 275 LRQRHRALAIVTGESLGQVAS---------QTLESMFVINDVTTTPILRPLVSMDKIEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ I D+ L E+
Sbjct: 326 DIAKKIDTHDISILPYEDC 344
>gi|161507290|ref|YP_001577244.1| thiamine biosynthesis protein ThiI [Lactobacillus helveticus DPC
4571]
gi|189030635|sp|A8YUL5|THII_LACH4 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|160348279|gb|ABX26953.1| Thiazole biosynthesis protein [Lactobacillus helveticus DPC 4571]
Length = 405
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 71/197 (36%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +E + F + K EL
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVDIEMVHFF-----SPPYTTEKALAKA-KEL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +G+ + + + + + + + K+ + L V R L A +
Sbjct: 227 TGILANYVGKINFIAVPF------AEIQETIKEKLPEGYLMT--VQRR--FMLQLADRIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +++ + + + V P+ + K E KL
Sbjct: 277 AKRGGLAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIKL 327
Query: 184 AQDIGGQDLVNLILEES 200
A+DIG DL E+
Sbjct: 328 AEDIGTFDLSIQPFEDC 344
>gi|297562063|ref|YP_003681037.1| thiamine biosynthesis/tRNA modification protein ThiI [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296846511|gb|ADH68531.1| thiamine biosynthesis/tRNA modification protein ThiI [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 429
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 64/195 (32%), Gaps = 27/195 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ L+L SGG DS + R +V+ L F + + K +
Sbjct: 196 MSGRGLVLMSGGIDSPVAAHRMIRRGLKVDFLHFS-----GMPFTGPESIYKAYSLVRQL 250
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +G ++P SS + + + Q + L A LA
Sbjct: 251 DRYQVGSRLFVIPFGKAQQQLKSSGIERLQIVAQRR------------LMLKTAEALADD 298
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG +V G D G + + + L + + PL+ + K E A+
Sbjct: 299 LGAECLVTG----DALG-----QVSSQTMTNLTALDDAVDLPILRPLIGMDKTEIMDHAR 349
Query: 186 DIGGQDLVNLILEES 200
IG + L E+
Sbjct: 350 RIGTLSISELPDEDC 364
>gi|163853494|ref|YP_001641537.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium extorquens PA1]
gi|163665099|gb|ABY32466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium extorquens PA1]
Length = 410
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 61/197 (30%), Gaps = 32/197 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y + C + I + +
Sbjct: 39 RVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACCAGRDIHDARAVAE 98
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D S+ A P N V R+++ L
Sbjct: 99 TLGIPHYVLD---YEDRFRESVIDRFAESYLSGETPIPCVECNRSVKFRDLL------GL 149
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------P 171
A LG + G + R + RA+ A++ + ++ P
Sbjct: 150 ARDLGAEALATGHYVASRA-----RPEGGRALYRALDPARDQSYFLYATTPEQLAYLRFP 204
Query: 172 LMWLKKYETWKLAQDIG 188
L K ET LA+++G
Sbjct: 205 LGERPKDETRALARELG 221
>gi|150389974|ref|YP_001320023.1| thiamine biosynthesis/tRNA modification protein ThiI [Alkaliphilus
metalliredigens QYMF]
gi|189030616|sp|A6TQ96|THII_ALKMQ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|149949836|gb|ABR48364.1| thiamine biosynthesis/tRNA modification protein ThiI [Alkaliphilus
metalliredigens QYMF]
Length = 392
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 78/238 (32%), Gaps = 48/238 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ALLL SGG DS R + + F + ++K+V+L
Sbjct: 173 PLGTNGKALLLLSGGIDSPVAGWLVAKRGVEIHGMHF-----HSYPFTSE-RAKEKVVDL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
G + + +L ++ K + K + + T + R + A +A
Sbjct: 227 AKILTTYCGRIKLYSVNLL------AIQKEINEKCPEEEM--TILSRR--FMMKIAERVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--------HVTVHTPLMWL 175
++G +V G +I + ++ + V PL+ +
Sbjct: 277 NKIGCDALVTG-----------------ESIGQVASQTVKGLHVTNAAVELPVFRPLIAM 319
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
K + LA+ I + L E+ T +L KR LR + ++
Sbjct: 320 DKVDIMDLARKIDTYETSILPFEDCCTVFLPKRPVTQPRLEK-------ILRSEALLD 370
>gi|297529046|ref|YP_003670321.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. C56-T3]
gi|297252298|gb|ADI25744.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. C56-T3]
Length = 402
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS ++ R +E + F ++K+++L+ K
Sbjct: 180 KAMLMLSGGIDSPVAGYLSMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKLTT 233
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G + HI+P + ++ + V + +L +T R L L R
Sbjct: 234 YGGRIKLHIVPFTEVQQ----AIYQGVPNEY---SLIST----RRA-MLRITDALRRRQR 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +E+ + ++ + PL+ + K E +LA+ I
Sbjct: 282 ALAIVTGESLGQVAS---------QTLESMYVINEVTNTPILRPLVSMDKLEIIELAKQI 332
Query: 188 GGQDLVNLILEES 200
G D+ L E+
Sbjct: 333 GTHDISILPYEDC 345
>gi|229062333|ref|ZP_04199652.1| thiamine biosynthesis protein thiI [Bacillus cereus AH603]
gi|228716965|gb|EEL68648.1| thiamine biosynthesis protein thiI [Bacillus cereus AH603]
Length = 404
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAKEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|229175358|ref|ZP_04302873.1| thiamine biosynthesis protein thiI [Bacillus cereus MM3]
gi|228608190|gb|EEK65497.1| thiamine biosynthesis protein thiI [Bacillus cereus MM3]
Length = 404
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|261418192|ref|YP_003251874.1| thiamine biosynthesis protein ThiI [Geobacillus sp. Y412MC61]
gi|319767848|ref|YP_004133349.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. Y412MC52]
gi|261374649|gb|ACX77392.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. Y412MC61]
gi|317112714|gb|ADU95206.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. Y412MC52]
Length = 402
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS ++ R +E + F ++K+++L+ K
Sbjct: 180 KAMLMLSGGIDSPVAGYLSMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKLTT 233
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G + HI+P + ++ + V + +L +T R L L R
Sbjct: 234 YGGRIKLHIVPFTEVQQ----AIYQGVPNEY---SLIST----RRA-MLRITDALRRRQR 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +E+ + ++ + PL+ + K E +LA+ I
Sbjct: 282 ALAIVTGESLGQVAS---------QTLESMYVINEVTNTPILRPLVSMDKLEIIELAKQI 332
Query: 188 GGQDLVNLILEES 200
G D+ L E+
Sbjct: 333 GTHDISILPYEDC 345
>gi|229169374|ref|ZP_04297084.1| thiamine biosynthesis protein thiI [Bacillus cereus AH621]
gi|228614137|gb|EEK71252.1| thiamine biosynthesis protein thiI [Bacillus cereus AH621]
Length = 404
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAKEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|315230927|ref|YP_004071363.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
MP]
gi|315183955|gb|ADT84140.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
MP]
Length = 381
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 67/198 (33%), Gaps = 40/198 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++L SGG DS + R V + G E L +KI + K+
Sbjct: 182 KVVVLLSGGIDSPVAAFLMMKRGCEVVPVHIYMG-------EKTLEKVRKIWNQLKKYHY 234
Query: 70 SLGEDHIL--------PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
D I+ L L ++ + T + N A
Sbjct: 235 GGKSDLIVIKPKERERVLRKLKELGRENYTCIFCKFMMVEN----------------ADK 278
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A G IV+G D G + +E + S + ++ PL+ L K E
Sbjct: 279 IAREFGAKGIVMG----DSLG-----QVASQTLENMYIVSQASDLPIYRPLIGLDKEEIV 329
Query: 182 KLAQDIGGQDLVNLILEE 199
+A++IG +L L +E
Sbjct: 330 GIAKEIGTFELSTLPEDE 347
>gi|295692647|ref|YP_003601257.1| thiamine biosynthesis protein thii [Lactobacillus crispatus ST1]
gi|295030753|emb|CBL50232.1| Thiamine biosynthesis protein thiI [Lactobacillus crispatus ST1]
Length = 405
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS AL R +E + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASWLALKRGVDIEMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + P A + + L + M +Q L A
Sbjct: 227 TGILANYAGKINFIAV-PFAEIQETIKEKLPEGYLMTVQRR------------FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ + G I G + + +++ + + + V P+ + K E
Sbjct: 274 RIRAQRGGLAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+DIG DL E+
Sbjct: 325 IKLAEDIGTFDLSIQPFEDC 344
>gi|256751315|ref|ZP_05492195.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter ethanolicus CCSD1]
gi|256749870|gb|EEU62894.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter ethanolicus CCSD1]
Length = 380
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A +L SGG DS + R VE + F + K +
Sbjct: 168 PLGTNGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYF-----HSPPYTSERAKDKVVDLC 222
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAA 120
+++ ++ + + ++ ++I + P T + R ++ A
Sbjct: 223 KVLSQYGQRIKLHVV-------------HFTDLQLEIYEKCPPKFTTIIMRRMMM-KIAE 268
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + G ++ G + + IE+ + + PL+ + K E
Sbjct: 269 KIAQKNGSMALITGESLGQVAS---------QTIESLYVTNASVSMPIFRPLIGMDKTEI 319
Query: 181 WKLAQDIGGQDLVNLILEES 200
LAQ I ++ E+
Sbjct: 320 IDLAQKISTFEISIRPYEDC 339
>gi|229013852|ref|ZP_04170980.1| thiamine biosynthesis protein thiI [Bacillus mycoides DSM 2048]
gi|228747521|gb|EEL97396.1| thiamine biosynthesis protein thiI [Bacillus mycoides DSM 2048]
Length = 404
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAKEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|167040647|ref|YP_001663632.1| thiamine biosynthesis protein ThiI [Thermoanaerobacter sp. X514]
gi|300914688|ref|ZP_07132004.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter sp. X561]
gi|307724078|ref|YP_003903829.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter sp. X513]
gi|238687596|sp|B0K3I5|THII_THEPX RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|166854887|gb|ABY93296.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter sp. X514]
gi|300889623|gb|EFK84769.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter sp. X561]
gi|307581139|gb|ADN54538.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter sp. X513]
Length = 380
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A +L SGG DS + R VE + F + K +
Sbjct: 168 PLGTNGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYF-----HSPPYTSERAKDKVVDLC 222
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAA 120
+++ ++ + + ++ ++I + P T + R ++ A
Sbjct: 223 KVLSQYGQRIKLHVV-------------HFTDLQLEIYEKCPPKFTTIIMRRMMM-KIAE 268
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + G ++ G + + IE+ + + PL+ + K E
Sbjct: 269 KIAQKNGSMALITGESLGQVAS---------QTIESLYVTNASVSMPIFRPLIGMDKTEI 319
Query: 181 WKLAQDIGGQDLVNLILEES 200
LAQ I ++ E+
Sbjct: 320 IDLAQKISTFEISIRPYEDC 339
>gi|167037213|ref|YP_001664791.1| thiamine biosynthesis protein ThiI [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115632|ref|YP_004185791.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687687|sp|B0K8J2|THII_THEP3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|166856047|gb|ABY94455.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928723|gb|ADV79408.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 380
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A +L SGG DS + R VE + F + K +
Sbjct: 168 PLGTNGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYF-----HSPPYTSERAKDKVVDLC 222
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAA 120
+++ ++ + + ++ ++I + P T + R ++ A
Sbjct: 223 KVLSQYGQRIKLHVV-------------HFTDLQLEIYEKCPPKFTTIIMRRMMM-KIAE 268
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + G ++ G + + IE+ + + PL+ + K E
Sbjct: 269 KIAQKNGSMALITGESLGQVAS---------QTIESLYVTNASVSMPIFRPLIGMDKTEI 319
Query: 181 WKLAQDIGGQDLVNLILEES 200
LAQ I ++ E+
Sbjct: 320 IDLAQKISTFEISIRPYEDC 339
>gi|150003178|ref|YP_001297922.1| argininosuccinate synthase [Bacteroides vulgatus ATCC 8482]
gi|237711978|ref|ZP_04542459.1| argininosuccinate synthase [Bacteroides sp. 9_1_42FAA]
gi|254882464|ref|ZP_05255174.1| argininosuccinate synthase [Bacteroides sp. 4_3_47FAA]
gi|265753213|ref|ZP_06088782.1| argininosuccinate synthase [Bacteroides sp. 3_1_33FAA]
gi|319640435|ref|ZP_07995157.1| argininosuccinate synthase [Bacteroides sp. 3_1_40A]
gi|149931602|gb|ABR38300.1| argininosuccinate synthase [Bacteroides vulgatus ATCC 8482]
gi|229454673|gb|EEO60394.1| argininosuccinate synthase [Bacteroides sp. 9_1_42FAA]
gi|254835257|gb|EET15566.1| argininosuccinate synthase [Bacteroides sp. 4_3_47FAA]
gi|263236399|gb|EEZ21894.1| argininosuccinate synthase [Bacteroides sp. 3_1_33FAA]
gi|317387922|gb|EFV68779.1| argininosuccinate synthase [Bacteroides sp. 3_1_40A]
Length = 402
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 14/133 (10%)
Query: 4 IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K ++ FSGG D S T + A ++ V + G ++ +L+ K+
Sbjct: 1 MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
+ D E + L + + + + IF A
Sbjct: 61 VKYVTLDVTREYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQGLAIAR 108
Query: 122 LAYRLGITNIVIG 134
A +G I G
Sbjct: 109 YANEIGADAIAHG 121
>gi|90419040|ref|ZP_01226951.1| tRNA methyl transferase
((5-methylaminomethyl-2-thiouridylate)-
methyltransferase) [Aurantimonas manganoxydans SI85-9A1]
gi|90337120|gb|EAS50825.1| tRNA methyl transferase
((5-methylaminomethyl-2-thiouridylate)-
methyltransferase) [Aurantimonas manganoxydans SI85-9A1]
Length = 425
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 62/194 (31%), Gaps = 27/194 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS + ++ V ++ + C + + + +
Sbjct: 50 RVVVAMSGGVDSSVVAAILKEQGYDVVGITLQLYDAGEGARRAGSCCAGQDIHDARRVAE 109
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
+LG H +L D ++ A P N V R+++
Sbjct: 110 TLGIHHYVLD---YEDRFRKAVINPFAASYLAGETPIPCVACNQTVKFRDLL------AT 160
Query: 123 AYRLGITNIVIGV------CETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMW 174
A LG + G S Y R + ++ G E + PL
Sbjct: 161 AQDLGADALATGHYIESRQNGAHRSLY---RPADLDRDQSYFLYGTTQEQLDFLRFPLGG 217
Query: 175 LKKYETWKLAQDIG 188
L K +T +LA+ G
Sbjct: 218 LTKPQTRELAERHG 231
>gi|212691683|ref|ZP_03299811.1| hypothetical protein BACDOR_01178 [Bacteroides dorei DSM 17855]
gi|237725766|ref|ZP_04556247.1| argininosuccinate synthase [Bacteroides sp. D4]
gi|212665872|gb|EEB26444.1| hypothetical protein BACDOR_01178 [Bacteroides dorei DSM 17855]
gi|229435574|gb|EEO45651.1| argininosuccinate synthase [Bacteroides dorei 5_1_36/D4]
Length = 402
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 14/133 (10%)
Query: 4 IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K ++ FSGG D S T + A ++ V + G ++ +L+ K+
Sbjct: 1 MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
+ D E + L + + + + IF A
Sbjct: 61 VKYVTLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQGLAIAR 108
Query: 122 LAYRLGITNIVIG 134
A +G I G
Sbjct: 109 YANEIGADAIAHG 121
>gi|258593519|emb|CBE69860.1| putative thiamine biosynthesis protein thiI [NC10 bacterium 'Dutch
sediment']
Length = 400
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 61/185 (32%), Gaps = 27/185 (14%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L SGG DS + R R+ + F + R K I + +
Sbjct: 190 CLLSGGIDSPVAAYRMMKRGCRIVFIHF-----HSQPFADRTSQDKAI--ELVRLLTRCQ 242
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYRLGITNI 131
L L G+I + + L VP R + L A +A + G +
Sbjct: 243 FTSRLYLVPFGEI------QQEVVAHVTGRLR---VPVYR-RLMLRIAEQIARKEGAQAL 292
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G S TI I T + + + PL+ + K E + AQ IG D
Sbjct: 293 VTGESLGQVSS------QTIENISTIEQVST---LPILRPLIGMDKDEITQQAQQIGSYD 343
Query: 192 LVNLI 196
+ +
Sbjct: 344 VSIIP 348
>gi|291485388|dbj|BAI86463.1| hypothetical protein BSNT_04307 [Bacillus subtilis subsp. natto
BEST195]
Length = 401
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS +A+ R VE + F ++K+++L
Sbjct: 173 PVGSAGKAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G HI+P ++ + +N M + L A
Sbjct: 227 AKCLSRFGGSMTLHIVPFTKTQELIQKQIPENYTMTATRR------------LMLQIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + ++ G + + +E+ + + + PL+ + K E
Sbjct: 275 IREKRNGLAVITGESLGQVAS---------QTLESMYAINAVTSTPILRPLIAMDKTEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+ +++IG + E+
Sbjct: 326 EKSREIGTYETSIQPFEDC 344
>gi|205822340|sp|A9W8W7|MNMA_METEP RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 385
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 61/197 (30%), Gaps = 32/197 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y + C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACCAGRDIHDARAVAE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D S+ A P N V R+++ L
Sbjct: 74 TLGIPHYVLD---YEDRFRESVIDRFAESYLSGETPIPCVECNRSVKFRDLL------GL 124
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------P 171
A LG + G + R + RA+ A++ + ++ P
Sbjct: 125 ARDLGAEALATGHYVASRA-----RPEGGRALYRALDPARDQSYFLYATTPEQLAYLRFP 179
Query: 172 LMWLKKYETWKLAQDIG 188
L K ET LA+++G
Sbjct: 180 LGERPKDETRALARELG 196
>gi|91783999|ref|YP_559205.1| hypothetical protein Bxe_A1806 [Burkholderia xenovorans LB400]
gi|91687953|gb|ABE31153.1| hypothetical protein Bxe_A1806 [Burkholderia xenovorans LB400]
Length = 458
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
GV DY YP R +E I V P +W K +T L+ +
Sbjct: 248 YGVYA-DYRNYP----TFFRKMERFIKALQGYQVRFEQPRLWFTKGQT--LSAFLRIPGK 300
Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
L+ + +C+ +R C C AC LR+
Sbjct: 301 SGEHLKSTRSCWQTRRVVNVGSRKQCGLCAACLLRR 336
>gi|329964694|ref|ZP_08301748.1| putative argininosuccinate synthase [Bacteroides fluxus YIT 12057]
gi|328525094|gb|EGF52146.1| putative argininosuccinate synthase [Bacteroides fluxus YIT 12057]
Length = 403
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 14/132 (10%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++K ++ FSGG D S T + A ++ V + G + +L+ K+
Sbjct: 1 MEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAK 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L + + + + IF A
Sbjct: 61 EYVTIDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARY 108
Query: 123 AYRLGITNIVIG 134
A +G I G
Sbjct: 109 ANEIGADAIAHG 120
>gi|296272539|ref|YP_003655170.1| hypothetical protein Arnit_1000 [Arcobacter nitrofigilis DSM 7299]
gi|296096713|gb|ADG92663.1| conserved hypothetical protein [Arcobacter nitrofigilis DSM 7299]
Length = 446
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 80/235 (34%), Gaps = 43/235 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETL-SFDYGQRNKVELE-CRLCVRKKIVELMPKWKD 69
+ L SGG DS ++ + + + FD ++ + + K+ +
Sbjct: 143 VCLLSGGLDSLAGAIDLINNDNNILFVSHFD----GAGAIDGEQKKIFDKLKASVSNKNL 198
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L + H+ P L S S+ R+I+FL FA A +
Sbjct: 199 YLSQFHVYPSDYLFYSSDSNQR------------------ARSILFLGFALFHAINFNVN 240
Query: 130 NIVIGVCETDYSGYPDCR------------HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
IV+ P I+ +E I + ++++ P + K
Sbjct: 241 EIVLPENGLISINLPLNESRTSSNSTRTTHPYFIKKLEQFIFQ-VGINISIVNPYQYKTK 299
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG---CNSCPACYLRQK 229
E D +DL+NL++ + +C KR + G C C C +R+
Sbjct: 300 GEMLDKCLD---KDLLNLLINRTISCSHYKRRGPWTRQVGINNCGYCIPCLIRRA 351
>gi|239637966|ref|ZP_04678927.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus warneri L37603]
gi|239596529|gb|EEQ79065.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus warneri L37603]
Length = 407
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 70/194 (36%), Gaps = 31/194 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHF-----HSPPFTSEK-AKEKVIELTRIMSE 232
Query: 70 SLG--EDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+G + HI+P L I+ S + + + + A L +++
Sbjct: 233 RVGPIKLHIVPFTDLQKQINKSVHPRYTMTSTRR-------------LMMRVADQLVHKI 279
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G IV G + + + + + + V PL+ L K + K A++
Sbjct: 280 GALGIVNGENLGQVAS---------QTLNSMYAINHVTSTPVLRPLLTLDKEDIVKKAKE 330
Query: 187 IGGQDLVNLILEES 200
IG ++ E+
Sbjct: 331 IGTFEVSIQPYEDC 344
>gi|254500068|ref|ZP_05112221.1| hypothetical protein SADFL11_106 [Labrenzia alexandrii DFL-11]
gi|222441535|gb|EEE48212.1| hypothetical protein SADFL11_106 [Labrenzia alexandrii DFL-11]
Length = 457
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 45/141 (31%), Gaps = 21/141 (14%)
Query: 115 FLVFAATLAYRLGITNIVI-----GVCETDYS----GYPDCR--HDTIRAIETAINLGME 163
F + + AY G + I+I G + YPD R + +E +
Sbjct: 216 FALISGIAAYLSGASEIIIPESGQGAIGPAIAPVVHAYPDYRNHPRFTQRMERLLKALFG 275
Query: 164 SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD-KRYEWGYGCNSCP 222
+ P +W K ET + + + +C+ R C C
Sbjct: 276 KEIRYVFPRLWNTKGETLRSFATLPEGSN----WHTTRSCWRSNRWCSVNGKRRQCGVCA 331
Query: 223 ACYLRQ-----KGWMEFKEKY 238
AC LR+ G E + Y
Sbjct: 332 ACMLRRLSVHAAGLTEADDAY 352
>gi|319651858|ref|ZP_08005983.1| hypothetical protein HMPREF1013_02595 [Bacillus sp. 2_A_57_CT2]
gi|317396510|gb|EFV77223.1| hypothetical protein HMPREF1013_02595 [Bacillus sp. 2_A_57_CT2]
Length = 402
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 67/193 (34%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS ++ R +E + F + ++K+++L K +
Sbjct: 180 KAMLMLSGGIDSPVAGYLSMKRGLEIEAVHF-----HSPPFTSE-RAKQKVIDLTEKLAN 233
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G HI+P + + H + N M + L + +
Sbjct: 234 IAGTVVLHIIPFTEIQQLIHQQVPSNYTMTATRR------------LMLRITDEIRNKND 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ G + + +E+ + + + PL+ + K E ++AQ I
Sbjct: 282 GLAIITGESLGQVAS---------QTLESMFAINDVTTTPILRPLITMDKSEIIEIAQSI 332
Query: 188 GGQDLVNLILEES 200
D+ E+
Sbjct: 333 DTHDISIRPFEDC 345
>gi|23099653|ref|NP_693119.1| thiamine biosynthesis [Oceanobacillus iheyensis HTE831]
gi|33301728|sp|Q8EPB3|THII_OCEIH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|22777883|dbj|BAC14154.1| thiamine biosynthesis [Oceanobacillus iheyensis HTE831]
Length = 400
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
+LLL SGG DS A+ R ++E + F + +K + + + K+
Sbjct: 178 KSLLLLSGGIDSPVAGFLAMKRGVQLEAIHF-----HSPPFTSERAKQKVLDLTQTLTKY 232
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
S+ HI+P L + + AM I + + + +
Sbjct: 233 GKSIKV-HIVPFTKLQQEIFREMPNDYAMTIMRR------------MMFRISERICEQEE 279
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I ++ G + + +++ + ++ + PL+ + K E +++Q+I
Sbjct: 280 ILSLTTGENLGQVAS---------QTMQSMHTINEVTNYPIIRPLISMDKQEVIEVSQEI 330
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 331 GTYETSIQPYEDC 343
>gi|228954917|ref|ZP_04116935.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228804738|gb|EEM51339.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 404
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K++++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKISEEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|229135484|ref|ZP_04264271.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST196]
gi|228648045|gb|EEL04093.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST196]
Length = 404
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + ++
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTQY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAKEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|163942380|ref|YP_001647264.1| thiamine biosynthesis protein ThiI [Bacillus weihenstephanensis
KBAB4]
gi|163864577|gb|ABY45636.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
weihenstephanensis KBAB4]
Length = 403
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + ++
Sbjct: 179 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTQY 233
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 234 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A++I
Sbjct: 281 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIAKEI 331
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 332 GTYDISIRPYEDC 344
>gi|205373221|ref|ZP_03226025.1| exsB protein [Bacillus coahuilensis m4-4]
Length = 53
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
++N I E++ TCY G G GC CP+C LR G + E+
Sbjct: 7 VLNYIREKTLTCYNG------MIGDGCGECPSCKLRSAGLFSYLEEKA 48
>gi|315303375|ref|ZP_07873989.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
ivanovii FSL F6-596]
gi|313628255|gb|EFR96774.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
ivanovii FSL F6-596]
Length = 403
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITEK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|328468698|gb|EGF39683.1| thiamine biosynthesis protein ThiI [Lactobacillus helveticus MTCC
5463]
Length = 405
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 70/200 (35%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R +E + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVDIEMVHFFSPPY------TTEKALTKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + P A + + L + M +Q L A
Sbjct: 227 TGILANYAGKINFIAV-PFAEIQETIKEKLPEGYLMTVQRR------------FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ + G I G + + +++ + + + V P+ + K E
Sbjct: 274 RIRAKRGGLAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+DIG DL E+
Sbjct: 325 IKLAEDIGTFDLSIQPFEDC 344
>gi|256842259|ref|ZP_05547763.1| argininosuccinate synthase [Parabacteroides sp. D13]
gi|301309009|ref|ZP_07214954.1| argininosuccinate synthase [Bacteroides sp. 20_3]
gi|256736143|gb|EEU49473.1| argininosuccinate synthase [Parabacteroides sp. D13]
gi|300833035|gb|EFK63660.1| argininosuccinate synthase [Bacteroides sp. 20_3]
Length = 399
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ FSGG D S T + A ++ V + G ++ +L+ K
Sbjct: 1 MKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYK------ 54
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAAT-LA 123
LG + + + + SL + + N P + R IF A A
Sbjct: 55 -----LGATKYVTIDVTKEYYEKSLKYMIFGNVLRNGTYPISVSSER--IFQALAIARYA 107
Query: 124 YRLGITNIVIG 134
+G I G
Sbjct: 108 NEIGADAIAHG 118
>gi|254459090|ref|ZP_05072513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacterales bacterium GD 1]
gi|207084361|gb|EDZ61650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacterales bacterium GD 1]
Length = 343
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 45/136 (33%), Gaps = 22/136 (16%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVE 62
+KK L+ SGG DS+ VE L Y + + E L +K +
Sbjct: 1 MKKNKKVLVGMSGGVDSTVSALLLKKDGYDVEGL---YMKLHSKPGYHEVHLSRAQKAAD 57
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVF 118
+ + H+L L + + + + + PN P RN+ F
Sbjct: 58 FVGM------KLHVLDL---QETFNEKVFQPFIDTYAEGKTPN---PCALCNRNLKFGEM 105
Query: 119 AATLAYRLGITNIVIG 134
A +G + G
Sbjct: 106 -VKFADLIGADYVATG 120
>gi|299535437|ref|ZP_07048759.1| thiamine biosynthesis protein [Lysinibacillus fusiformis ZC1]
gi|298729198|gb|EFI69751.1| thiamine biosynthesis protein [Lysinibacillus fusiformis ZC1]
Length = 402
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ +LL+ SGG DS + R R+E + F Y +N +E + K+
Sbjct: 174 PVGSNGKSLLMLSGGIDSPVAGYLMMKRGVRLEAIHFFSPPYTSQNSLE-------KVKV 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + H++P + + + NV+M + L A
Sbjct: 227 LANELTKFGASIRLHVIPFTEIQVLIKEKVPSNVSMTTTRR------------MMLKVAD 274
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ +G IV G + + +E+ + ++ + PL+ K E
Sbjct: 275 QVREEIGALAIVTGESLGQVAS---------QTLESLTAINAVTNTPILRPLISTDKLEI 325
Query: 181 WKLAQDIGGQDLVNLILEES 200
+A+ IG + E+
Sbjct: 326 IDIAEKIGTYETSIQPFEDC 345
>gi|150006743|ref|YP_001301486.1| argininosuccinate synthase [Parabacteroides distasonis ATCC 8503]
gi|255016527|ref|ZP_05288653.1| argininosuccinate synthase [Bacteroides sp. 2_1_7]
gi|262384834|ref|ZP_06077966.1| argininosuccinate synthase [Bacteroides sp. 2_1_33B]
gi|298377705|ref|ZP_06987656.1| argininosuccinate synthase [Bacteroides sp. 3_1_19]
gi|149935167|gb|ABR41864.1| argininosuccinate synthase [Parabacteroides distasonis ATCC 8503]
gi|262293550|gb|EEY81486.1| argininosuccinate synthase [Bacteroides sp. 2_1_33B]
gi|298265408|gb|EFI07070.1| argininosuccinate synthase [Bacteroides sp. 3_1_19]
Length = 399
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 16/131 (12%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ FSGG D S T + A ++ V + G ++ +L+ K
Sbjct: 1 MKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYK------ 54
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAAT-LA 123
LG + + + + SL + + N P + R IF A A
Sbjct: 55 -----LGATKYVTIDVTKEYYEKSLKYMIFGNVLRNGTYPISVSSER--IFQALAIARYA 107
Query: 124 YRLGITNIVIG 134
+G I G
Sbjct: 108 NEIGADAIAHG 118
>gi|116873021|ref|YP_849802.1| thiamine biosynthesis protein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123461105|sp|A0AJ41|THII_LISW6 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|116741899|emb|CAK21023.1| thiamine biosynthesis protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 403
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + ++K V+L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQ-AKQKAVDL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K GE HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYGGEVKMHIVPFTEIQEMIKQQIPESVIMTVTRR------------MMLKITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTTTPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|240103538|ref|YP_002959847.1| thiamine biosynthesis protein ThiI [Thermococcus gammatolerans EJ3]
gi|239911092|gb|ACS33983.1| Thiamine biosynthesis protein (ThiI) [Thermococcus gammatolerans
EJ3]
Length = 380
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 62/190 (32%), Gaps = 24/190 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SGG DS + R V + G++ VRK +L
Sbjct: 181 KVVALLSGGIDSPVAAFLMMKRGVEVIPVHIYMGEKT------LEKVRKIWNQLKKYHYG 234
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
E ++ I ++ F + + A +A G
Sbjct: 235 GKAELIVVKPKERKRI------IEKLKELGKEKYTCVFCKF---MMVRHADKIAKDFGAK 285
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV+G D G + +E + S + ++ PL+ + K E +A+ IG
Sbjct: 286 GIVMG----DSLG-----QVASQTLENMYIVSQASDLPIYRPLIGMDKEEIVSIAKRIGT 336
Query: 190 QDLVNLILEE 199
+L L +E
Sbjct: 337 FELSTLPEDE 346
>gi|170745411|ref|YP_001766868.1| hypothetical protein Mrad2831_6141 [Methylobacterium radiotolerans
JCM 2831]
gi|170659012|gb|ACB28066.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 435
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 25/229 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVE 62
+ ++ SA LFSGG DS + + +R +S Y +R + L V
Sbjct: 145 LSRSESA-CLFSGGLDSYIGALDLIAQGERPLLVSHAYRGDRRYQDRTAHALPVACARFS 203
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
S D + +++ + +++ N +VP N + + A L
Sbjct: 204 ANAHPTWSGPSDVSMRTRSFNFLAYGAAAATAISQMRAGNRVTLWVPE-NGL-IALNAPL 261
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
R IG T + +++++ I + V + PL K E
Sbjct: 262 TPRR------IGSHSTRTTH-----PYFLQSMQN-ILDAVGLPVAIVNPLRHQTKGEMV- 308
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
+ +C KRD G C C C +R+ +
Sbjct: 309 --LRHARDPAFVAQAVRTVSCGKWKRD-----GTQCGRCVPCLIRRASF 350
>gi|257467821|ref|ZP_05631917.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium ulcerans ATCC 49185]
gi|317062110|ref|ZP_07926595.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium ulcerans ATCC 49185]
gi|313687786|gb|EFS24621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium ulcerans ATCC 49185]
Length = 346
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 12/79 (15%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMP 65
A++ SGG DSS ++ V ++ + +K E L + ++I + +
Sbjct: 3 RKKAVIGMSGGVDSSVGAYLLKEQGYEVIGVTLN----HKKEKSLNEEIKAAQRICDFLG 58
Query: 66 KWKDSLGEDHILPLAILGD 84
E I+ + L
Sbjct: 59 I------EHKIIDIEELFQ 71
>gi|284161310|ref|YP_003399933.1| thiamine biosynthesis/tRNA modification protein ThiI [Archaeoglobus
profundus DSM 5631]
gi|284011307|gb|ADB57260.1| thiamine biosynthesis/tRNA modification protein ThiI [Archaeoglobus
profundus DSM 5631]
Length = 359
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 67/186 (36%), Gaps = 23/186 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKDS 70
+ LFSGG DS + R V + FD ++ +E V K + E P + D
Sbjct: 169 VSLFSGGIDSPVATWLMMKRGCEVVPIYFDIRPFTSERAIERVEKVAKVLKEYDPDF-DV 227
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ ++H L + DI ++ L A +A +G
Sbjct: 228 IVKEHGNFLMKVKDILKEKRLESYTCIFCKRR------------MLKVAEEVAKDVGAKG 275
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
IV G D G + ++ + + + ++ PL+ K E ++A+ IG
Sbjct: 276 IVTG----DSLG-----QVASQTLDNLLVISQACSIPIYRPLIGFDKIEIEEIARKIGTF 326
Query: 191 DLVNLI 196
+ +
Sbjct: 327 EYSTIP 332
>gi|254519390|ref|ZP_05131446.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
sp. 7_2_43FAA]
gi|226913139|gb|EEH98340.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
sp. 7_2_43FAA]
Length = 384
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS R + + Y + E K + +++ + + +
Sbjct: 178 LMLSGGIDSPVAGYLMARRGVELHCV---YYHSHPYTSERAKDKVKDLAKILATYTERVN 234
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ I I + + + ++ + A +L+ + GI ++
Sbjct: 235 LHIVPFTEIQMAIINCCREDELTIIMRR-------------FMMRVACSLSEKYGIQSVS 281
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +E + + V PL+ + K + +A++IG +
Sbjct: 282 SGESIGQVAS---------QTMEGLMVSNDCADRPVFRPLIAMDKTDIMDIAREIGTYET 332
Query: 193 VNLILEES 200
L E+
Sbjct: 333 SILPYEDC 340
>gi|218264284|ref|ZP_03478141.1| hypothetical protein PRABACTJOHN_03832 [Parabacteroides johnsonii
DSM 18315]
gi|218222121|gb|EEC94771.1| hypothetical protein PRABACTJOHN_03832 [Parabacteroides johnsonii
DSM 18315]
Length = 399
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 14/130 (10%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ FSGG D S T + A ++ V + G ++ +L+ K+
Sbjct: 1 MKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGATKY 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
D E + L + + + + IF A A
Sbjct: 61 VTIDVTKEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARYAN 108
Query: 125 RLGITNIVIG 134
+G I G
Sbjct: 109 EIGADAIAHG 118
>gi|154491665|ref|ZP_02031291.1| hypothetical protein PARMER_01276 [Parabacteroides merdae ATCC
43184]
gi|154087906|gb|EDN86951.1| hypothetical protein PARMER_01276 [Parabacteroides merdae ATCC
43184]
Length = 399
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 14/130 (10%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ FSGG D S T + A ++ V + G ++ +L+ K+
Sbjct: 1 MKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGATKY 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
D E + L + + + + IF A A
Sbjct: 61 VTIDVTKEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARYAN 108
Query: 125 RLGITNIVIG 134
+G I G
Sbjct: 109 EIGADAIAHG 118
>gi|259502838|ref|ZP_05745740.1| thiamine biosynthesis protein ThiI [Lactobacillus antri DSM 16041]
gi|259169205|gb|EEW53700.1| thiamine biosynthesis protein ThiI [Lactobacillus antri DSM 16041]
Length = 422
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +++ SGG DS + R +E + F + L K++ E
Sbjct: 190 PVGTAGKGMMMLSGGIDSPVAAYLGMKRGVSMEMVHFFSPPYTSPQ---ALAKAKQLTEK 246
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ S+ + + + + V K+ + L V R + L A +
Sbjct: 247 LAKYSGSIR---------FIQVPFTEIQETVKEKVPEGYLMT--VQRR--MMLRLATAIM 293
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + ++ V P++ K E K+
Sbjct: 294 EKRHGLAIFNGESLGQVAS---------QTMESMLAIEDVTNYPVLRPVLSFDKTEIIKI 344
Query: 184 AQDIGGQDLVNLILEES 200
A+DI DL L E+
Sbjct: 345 AEDIDTYDLSILPYEDC 361
>gi|229019875|ref|ZP_04176675.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1273]
gi|228741428|gb|EEL91628.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1273]
Length = 242
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 18 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 72
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 73 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 119
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A +I
Sbjct: 120 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIANEI 170
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 171 GTYDISIRPYEDC 183
>gi|229026102|ref|ZP_04182481.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1272]
gi|228735204|gb|EEL85820.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1272]
Length = 404
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A +I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKIANEI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|322420484|ref|YP_004199707.1| hypothetical protein GM18_2988 [Geobacter sp. M18]
gi|320126871|gb|ADW14431.1| hypothetical protein GM18_2988 [Geobacter sp. M18]
Length = 700
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 80/245 (32%), Gaps = 48/245 (19%)
Query: 12 LLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+++FSGG DS L+ A+D RV ++ ++ +L R +K++
Sbjct: 157 VVMFSGGLDS---LAGAIDEVLNEKHRVVLVT----HKSTPKLNKRHRRLEKMIADKAGE 209
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L HI + T+ R+ +++ AT+A +
Sbjct: 210 NAPL---HIGVRVNKNKGLNYEYTQRS----------------RSFLYVSIGATIAKMIN 250
Query: 128 ITNIVIGVCETDYSGYPDCR------------HDTIRAIETAINLGMESHVTVHTPLMWL 175
+ ++ P C IR + I+L T+ P +W
Sbjct: 251 LKSVRFYENGVISLNLPVCAQVVGGRATRTTHPRVIRGFQEIISLVAGEPFTIENPYIWK 310
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + + G Q+++ +HT + C +C C R+ + K
Sbjct: 311 TKADVVGVITKAGCQEMIAASTTCTHT------WEMTNHHTHCGTCSQCIDRRFAVIAAK 364
Query: 236 EKYQD 240
D
Sbjct: 365 ADQHD 369
>gi|315282529|ref|ZP_07870921.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
marthii FSL S4-120]
gi|313613832|gb|EFR87584.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
marthii FSL S4-120]
Length = 403
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|313608552|gb|EFR84436.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
monocytogenes FSL F2-208]
Length = 403
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|255029387|ref|ZP_05301338.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes LO28]
Length = 360
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|217964254|ref|YP_002349932.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
monocytogenes HCC23]
gi|290894498|ref|ZP_06557454.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
J2-071]
gi|254784227|sp|B8DHE9|THII_LISMH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|217333524|gb|ACK39318.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
monocytogenes HCC23]
gi|290555953|gb|EFD89511.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
J2-071]
gi|307571178|emb|CAR84357.1| thiamine biosynthesis protein [Listeria monocytogenes L99]
Length = 403
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|16803632|ref|NP_465117.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes EGD-e]
gi|224499174|ref|ZP_03667523.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes Finland
1988]
gi|224501468|ref|ZP_03669775.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
R2-561]
gi|254828173|ref|ZP_05232860.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
N3-165]
gi|254831993|ref|ZP_05236648.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes 10403S]
gi|284801984|ref|YP_003413849.1| hypothetical protein LM5578_1739 [Listeria monocytogenes 08-5578]
gi|284995126|ref|YP_003416894.1| hypothetical protein LM5923_1691 [Listeria monocytogenes 08-5923]
gi|20140606|sp|Q8Y6U0|THII_LISMO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|16411021|emb|CAC99670.1| lmo1592 [Listeria monocytogenes EGD-e]
gi|258600560|gb|EEW13885.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
N3-165]
gi|284057546|gb|ADB68487.1| hypothetical protein LM5578_1739 [Listeria monocytogenes 08-5578]
gi|284060593|gb|ADB71532.1| hypothetical protein LM5923_1691 [Listeria monocytogenes 08-5923]
Length = 403
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|47096805|ref|ZP_00234387.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes str.
1/2a F6854]
gi|254898241|ref|ZP_05258165.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes J0161]
gi|254912266|ref|ZP_05262278.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes J2818]
gi|254936593|ref|ZP_05268290.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes F6900]
gi|47014838|gb|EAL05789.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes str.
1/2a F6854]
gi|258609189|gb|EEW21797.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes F6900]
gi|293590244|gb|EFF98578.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes J2818]
Length = 403
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|241760123|ref|ZP_04758221.1| conserved hypothetical protein [Neisseria flavescens SK114]
gi|241319577|gb|EER56007.1| conserved hypothetical protein [Neisseria flavescens SK114]
Length = 438
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 82/232 (35%), Gaps = 32/232 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELM- 64
+ + LFSGG DSS L++ +S Y G +++ + + + +
Sbjct: 145 RNKDCVCLFSGGLDSSIGAIDLLEQGHSPVLVSHSYKGDKSRQQAIIQQLNQNGYINQFS 204
Query: 65 -------PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
P + + + L ++ + ++ + + + FVP N + +
Sbjct: 205 QFNAIAQPHLNNGRATEITMRTRSLNFLAFAIISAYALQEFVQEEI-DVFVPE-NGV-IS 261
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A L R +G T + I+ I+ + + T+ P + K
Sbjct: 262 INAPLTVRR------VGALSTRTTH-----PYFIQEIQR-LFTAVNIPFTLRNPYQFKTK 309
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ +++ L+ I+ ++ +C KR + C C C +R+
Sbjct: 310 GQMIAECENL---PLLQQIIPDTVSCSHWKRKNQQ-----CGVCVPCLIRRA 353
>gi|126179558|ref|YP_001047523.1| ExsB family protein [Methanoculleus marisnigri JR1]
gi|125862352|gb|ABN57541.1| ExsB family protein [Methanoculleus marisnigri JR1]
Length = 257
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 62/191 (32%), Gaps = 38/191 (19%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++K + SGG DSS L+ A +V +S D G EL
Sbjct: 10 LLKSYEPVAVALSGGTDSSVLLALARHHGIQVIAISVDTGLTPPGELAAAR--------- 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K + LG H++ + DI +++N +V R + A
Sbjct: 61 --KLSERLGLPHVVIPLDMLDIP----------AVRENRPDRCYVCKR-AMMEAI-VAEA 106
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYETW 181
R G +V G D R + LG + +P + K +
Sbjct: 107 RRQGCRTVVDGTHADD-------RPAARPGMRVLSELG------IKSPFAECGMGKADVE 153
Query: 182 KLAQDIGGQDL 192
LA+++G
Sbjct: 154 ALARELGVPVR 164
>gi|77456574|ref|YP_346079.1| thiamine biosynthesis protein ThiI [Pseudomonas fluorescens Pf0-1]
gi|123606290|sp|Q3KJG6|THII_PSEPF RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|77380577|gb|ABA72090.1| [ThiS-adenylate] sulfurtransferase [Pseudomonas fluorescens Pf0-1]
Length = 484
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 67/188 (35%), Gaps = 35/188 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPKWK 68
L+L SGG DS+ L R F+ G R EL E + KK
Sbjct: 183 LVLMSGGFDSTVAAYQILRRGLMTHFCFFNLGGRAH-ELGVMEVAHFIWKKYGSSQRVLF 241
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S+ + +L G+I K+ D+++ V R + L A+++A RL I
Sbjct: 242 VSVPFEEVL-----GEILG---------KVDDSHMG--VVLKR--MMLRAASSIAERLHI 283
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P ++ + + + PL+ K + A
Sbjct: 284 DALVTGEAISQVSSQTLP----------NLSVIDCVTDKLVLR-PLIVAHKQDIIDTADQ 332
Query: 187 IGGQDLVN 194
IG D
Sbjct: 333 IGTGDFAR 340
>gi|83951084|ref|ZP_00959817.1| hypothetical protein ISM_08280 [Roseovarius nubinhibens ISM]
gi|83838983|gb|EAP78279.1| hypothetical protein ISM_08280 [Roseovarius nubinhibens ISM]
Length = 228
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 77/241 (31%), Gaps = 37/241 (15%)
Query: 1 MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M KK + L++ SGG DS+ L+ AL + + + + + LE R
Sbjct: 1 MTKRPKKPKFTRLIMLSGGIDSTFLLAQALRETEDLVLVH----HVHLINLEGRHRAEAH 56
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII----- 114
+ + ++ D + + + ++ +V + + T N +
Sbjct: 57 ACKKIVEYCRRNYRDFVYTESTVDRSGLYAMGYDVITVASEAGIAAT-----NHLLETGG 111
Query: 115 ---FLVFAATLAYRLGI----TNIVIGVCETDYSGYP-DCRHDTIRAIETAINLGMESHV 166
F + L + + + P R I A A
Sbjct: 112 MADFWMLGFNLEEAHDAEEENDEVGLSASGDQAAQRPATNRLPYILAAIAATCFPN---- 167
Query: 167 TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACY 225
P +L+ + +++ +L+ + TC +R R + G+ C C C
Sbjct: 168 ---APPKYLRP--ILQPKRELMDYMGQDLV-DLCWTC---RRPVRTDQGFHECGECKTCK 218
Query: 226 L 226
L
Sbjct: 219 L 219
>gi|325299934|ref|YP_004259851.1| Argininosuccinate synthase [Bacteroides salanitronis DSM 18170]
gi|324319487|gb|ADY37378.1| Argininosuccinate synthase [Bacteroides salanitronis DSM 18170]
Length = 401
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 14/132 (10%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+++ ++ FSGG D S T + A ++ V + G + +L+ K+ +
Sbjct: 1 MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSAEQLKKNEENAYKLGAV 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L + + + + IF A
Sbjct: 61 KYVTLDVTQEYYAKSLKYM-IFGNVLRNGTYPISVSSER-----------IFQALAIARY 108
Query: 123 AYRLGITNIVIG 134
A +G I G
Sbjct: 109 ANEIGAHAIAHG 120
>gi|312793759|ref|YP_004026682.1| thiamine biosynthesis/tRNA modification protein thii
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180899|gb|ADQ41069.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 392
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R +E + F Y E + + +++ K+ D
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHF-YSFPYTGEKAKEKVI--DLCKVLAKYTD 237
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I I + + + + ++ + A +A + G
Sbjct: 238 KIKLYIVPFTEIQLSIYENCDERFLTIIMRR-------------FMMKIAQKIAMQNGGL 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + + +E+ + V PL+ + K E +LA+ IG
Sbjct: 285 ALITGESIGQVAS---------QTMESLFCTQAAVSMPVFRPLIGMDKEEIIRLAKKIGT 335
Query: 190 QDLVNLILEES 200
D+ L E+
Sbjct: 336 YDISILPYEDC 346
>gi|312622235|ref|YP_004023848.1| thiamine biosynthesis/tRNA modification protein thii
[Caldicellulosiruptor kronotskyensis 2002]
gi|312202702|gb|ADQ46029.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor kronotskyensis 2002]
Length = 392
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R +E + F Y E + + +++ K+ D
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHF-YSFPYTGEKAKEKVI--DLCKVLAKYTD 237
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I I + + + + ++ + A +A + G
Sbjct: 238 KIKLYIVPFTEIQLSIYENCDERFLTIIMRR-------------FMMKIAQKIAMQNGGL 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + + +E+ + V PL+ + K E +LA+ IG
Sbjct: 285 ALITGESIGQVAS---------QTMESLFCTQAAVSMPVFRPLIGMDKEEIIRLAKKIGT 335
Query: 190 QDLVNLILEES 200
D+ L E+
Sbjct: 336 YDISILPYEDC 346
>gi|312127406|ref|YP_003992280.1| thiamine biosynthesis/tRNA modification protein thii
[Caldicellulosiruptor hydrothermalis 108]
gi|311777425|gb|ADQ06911.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor hydrothermalis 108]
Length = 392
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R +E + F Y E + + +++ K+ D
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHF-YSFPYTGEKAKEKVI--DLCKVLAKYTD 237
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I I + + + + ++ + A +A + G
Sbjct: 238 KIKLYIVPFTEIQLSIYENCDERFLTIIMRR-------------FMMKIAQKIAMQNGGL 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + + +E+ + V PL+ + K E +LA+ IG
Sbjct: 285 ALITGESIGQVAS---------QTMESLFCTQAAVSMPVFRPLIGMDKEEIIRLAKKIGT 335
Query: 190 QDLVNLILEES 200
D+ L E+
Sbjct: 336 YDISILPYEDC 346
>gi|302871659|ref|YP_003840295.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor obsidiansis OB47]
gi|302574518|gb|ADL42309.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor obsidiansis OB47]
Length = 392
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R +E + F Y E + + +++ K+ D
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHF-YSFPYTGEKAKEKVI--DLCKVLAKYTD 237
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I I + + + + ++ + A +A + G
Sbjct: 238 KIKLYIVPFTEIQLSIYENCDERFLTIIMRR-------------FMMKIAQKIAMQNGGL 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + + +E+ + V PL+ + K E +LA+ IG
Sbjct: 285 ALITGESIGQVAS---------QTMESLFCTQAAVSMPVFRPLIGMDKEEIIRLAKKIGT 335
Query: 190 QDLVNLILEES 200
D+ L E+
Sbjct: 336 YDISILPYEDC 346
>gi|222529535|ref|YP_002573417.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor bescii DSM 6725]
gi|222456382|gb|ACM60644.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor bescii DSM 6725]
Length = 392
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R +E + F Y E + + +++ K+ D
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHF-YSFPYTGEKAKEKVI--DLCKVLAKYTD 237
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I I + + + + ++ + A +A + G
Sbjct: 238 KIKLYIVPFTEIQLSIYENCDERFLTIIMRR-------------FMMKIAQKIAMQNGGL 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + + +E+ + V PL+ + K E +LA+ IG
Sbjct: 285 ALITGESIGQVAS---------QTMESLFCTQAAVSMPVFRPLIGMDKEEIIRLAKKIGT 335
Query: 190 QDLVNLILEES 200
D+ L E+
Sbjct: 336 YDISILPYEDC 346
>gi|332976064|gb|EGK12934.1| thiamine biosynthesis protein ThiI [Desmospora sp. 8437]
Length = 398
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +L+ SGG DS + L R +E + F + R+K+ +L
Sbjct: 172 PVGSSGRVMLMLSGGIDSPVAAYYVLKRGAALEAVHF-----HSYPFTSE-RARQKVEDL 225
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G+ H++P + + + I + +
Sbjct: 226 AQILTRYAGKIRLHVVPFTEIQTQIREKCPSSYMITIMRR------------FMVRISEE 273
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA R G +V G + T+ ++ + + + + PL+ + K E
Sbjct: 274 LARRNGALALVTGESLGQVAS------QTLESMNA---INDVTRMPILRPLVGMDKQEIM 324
Query: 182 KLAQDIGGQDLVNLILEES 200
K+++ IG + L E+
Sbjct: 325 KVSRGIGTYETSILPYEDC 343
>gi|323341681|ref|ZP_08081914.1| thiamine biosynthesis protein ThiI [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322464106|gb|EFY09299.1| thiamine biosynthesis protein ThiI [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 409
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKKIVELMPKWK 68
+++ SGG DS + R R+E + F E + ++ + +++ +
Sbjct: 189 KVMVMLSGGIDSPVAAYLMMKRGVRIEAIHFASPPYTSDEAQKKVMDLAQQLTNYQDHIR 248
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++ + L I + S A+ + L A LA+R
Sbjct: 249 INVVPFTDVQLEIYKKVPES-----YAITMMRR------------FMLRIAERLAFRRNC 291
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I G + T+ +++ N+G + + PL+ K E LA+ I
Sbjct: 292 LAIANGESLGQVAS------QTLHSMKEITNIGT---LPILRPLITYDKVEIIDLARKID 342
Query: 189 GQDLVNLILEES 200
+ L E+
Sbjct: 343 TYETSILPFEDC 354
>gi|330995862|ref|ZP_08319758.1| putative argininosuccinate synthase [Paraprevotella xylaniphila YIT
11841]
gi|332877299|ref|ZP_08445047.1| putative argininosuccinate synthase [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|329574393|gb|EGG55964.1| putative argininosuccinate synthase [Paraprevotella xylaniphila YIT
11841]
gi|332684682|gb|EGJ57531.1| putative argininosuccinate synthase [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 401
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 16/131 (12%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
A ++ FSGG D S T + A ++ V + G + +L+ K
Sbjct: 1 MAKKVVVAFSGGLDTSYTVMYLAKEKGYEVYAACANTGGFSAEQLKANEENAYK------ 54
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAAT-LA 123
LG + L + + SL + + NN P + R IF A A
Sbjct: 55 -----LGAKEYVTLDVTKEYYEKSLRYMIYGNVLRNNCYPISVSSER--IFQAIAIARYA 107
Query: 124 YRLGITNIVIG 134
+G I G
Sbjct: 108 NEVGADAIAHG 118
>gi|209884347|ref|YP_002288204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oligotropha carboxidovorans OM5]
gi|229486419|sp|B6JCC3|MNMA_OLICO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|209872543|gb|ACI92339.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oligotropha carboxidovorans OM5]
Length = 393
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 20/192 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSST + V ++ Y + C + I +
Sbjct: 12 SSTRVVVAMSGGVDSSTTAALLKAEGYDVIGITLQLYDHGEATHRKGACCAGQDIHDARD 71
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAAT 121
+ ++L S+ A P VP R++ F T
Sbjct: 72 VAERIGIPHYVLD---YESRFRESVIDRFAESYALGETP---VPCIECNRSVKFRDLLTT 125
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLMW 174
A LG + G PD + A + + + PL
Sbjct: 126 -AQELGAQALATG-HYVASRRQPDGSRAMVCAADADRDQSYFLFATTQDQLNHLRFPLGD 183
Query: 175 LKKYETWKLAQD 186
+ K +T +LA+
Sbjct: 184 MTKAQTRELARR 195
>gi|330685043|gb|EGG96716.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus epidermidis VCU121]
Length = 407
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 70/194 (36%), Gaps = 31/194 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHF-----HSPPFTSEK-AKEKVIELTRIMSE 232
Query: 70 SLG--EDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+G + HI+P L I+ S + + + + A L +++
Sbjct: 233 LVGPIKLHIVPFTDLQKQINKSVHPRYTMTSTRR-------------LMMRVADQLVHKI 279
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G IV G + + + + + + V PL+ L K + K A++
Sbjct: 280 GALGIVNGENLGQVAS---------QTLNSMYAINHVTSTPVLRPLLTLDKEDIVKKAKE 330
Query: 187 IGGQDLVNLILEES 200
IG ++ E+
Sbjct: 331 IGTFEVSIQPYEDC 344
>gi|256848778|ref|ZP_05554212.1| thiazole biosynthesis protein [Lactobacillus crispatus MV-1A-US]
gi|256714317|gb|EEU29304.1| thiazole biosynthesis protein [Lactobacillus crispatus MV-1A-US]
Length = 405
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS AL R +E + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASWLALKRGVDIEMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + P A + + L + M +Q L A
Sbjct: 227 TGILANYAGKINFIAV-PFAEIQETIKEKLPEGYLMTVQRR------------FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ + G I G + + +++ + + + V P+ + K E
Sbjct: 274 RIRAQRGGLAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
A++IG DL E+
Sbjct: 325 IAKAEEIGTFDLSIQPFEDC 344
>gi|256842858|ref|ZP_05548346.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
crispatus 125-2-CHN]
gi|262045824|ref|ZP_06018788.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
crispatus MV-3A-US]
gi|293381693|ref|ZP_06627674.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
crispatus 214-1]
gi|312977623|ref|ZP_07789370.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
crispatus CTV-05]
gi|256614278|gb|EEU19479.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
crispatus 125-2-CHN]
gi|260573783|gb|EEX30339.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
crispatus MV-3A-US]
gi|290921740|gb|EFD98761.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
crispatus 214-1]
gi|310895362|gb|EFQ44429.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
crispatus CTV-05]
Length = 405
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS AL R +E + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASWLALKRGVDIEMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + P A + + L + M +Q L A
Sbjct: 227 TGILANYAGKINFIAV-PFAEIQETIKEKLPEGYLMTVQRR------------FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ + G I G + + +++ + + + V P+ + K E
Sbjct: 274 RIRAQRGGLAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
A++IG DL E+
Sbjct: 325 IAKAEEIGTFDLSIQPFEDC 344
>gi|153003258|ref|YP_001377583.1| thiamine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
gi|152026831|gb|ABS24599.1| thiamine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
Length = 351
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 5/131 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+ + SGG DS+ L+ + V+ ++F Y E + R R +
Sbjct: 1 MPKQGKAIAMISGGLDSTLALALVRRQGVEVKAVTF-YTGFCITETQRRKGGRAD-GAVP 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-PNTFVPGRNIIFLVFAATLA 123
D + + + DIS S + N V R + + A +
Sbjct: 59 RNEALRAAADLEVDIEYV-DISGSEYLDMLVHPKYGYGANANPCVDCR-VFMMRKAKEIM 116
Query: 124 YRLGITNIVIG 134
G I G
Sbjct: 117 EAEGADFIFTG 127
>gi|332312034|gb|EGJ25129.1| Putative tRNA sulfurtransferase [Listeria monocytogenes str. Scott
A]
Length = 398
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + ++K V+L
Sbjct: 168 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQ-AKQKAVDL 221
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 222 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 269
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L R IV G + + +E+ + + + + P++ + K E
Sbjct: 270 LRRRRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 320
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 321 QIAQKIDTYNLSVQPFEDC 339
>gi|328464959|gb|EGF36238.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes 1816]
Length = 380
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + ++K V+L
Sbjct: 150 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQ-AKQKAVDL 203
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 204 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 251
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L R IV G + + +E+ + + + + P++ + K E
Sbjct: 252 LRRRRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 302
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 303 QIAQKIDTYNLSVQPFEDC 321
>gi|254993739|ref|ZP_05275929.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
J2-064]
Length = 335
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + ++K V+L
Sbjct: 150 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQ-AKQKAVDL 203
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 204 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 251
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L R IV G + + +E+ + + + + P++ + K E
Sbjct: 252 LRRRRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 302
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 303 QIAQKIDTYNLSVQPFEDC 321
>gi|46907823|ref|YP_014212.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes serotype
4b str. F2365]
gi|226224193|ref|YP_002758300.1| thiamin biosynthesis protein ThiI [Listeria monocytogenes
Clip81459]
gi|254824349|ref|ZP_05229350.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254852214|ref|ZP_05241562.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
R2-503]
gi|254931532|ref|ZP_05264891.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes HPB2262]
gi|300765983|ref|ZP_07075954.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
N1-017]
gi|67461976|sp|Q71Z75|THII_LISMF RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|259518565|sp|C1KVN9|THII_LISMC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|46881092|gb|AAT04389.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes serotype
4b str. F2365]
gi|225876655|emb|CAS05364.1| Putative thiamin biosynthesis protein ThiI [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605521|gb|EEW18129.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
R2-503]
gi|293583086|gb|EFF95118.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes HPB2262]
gi|293593583|gb|EFG01344.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300513301|gb|EFK40377.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
N1-017]
gi|328474826|gb|EGF45630.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes 220]
Length = 403
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + ++K V+L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQ-AKQKAVDL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L R IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRRRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|47093454|ref|ZP_00231218.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes str. 4b
H7858]
gi|47018182|gb|EAL08951.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes str. 4b
H7858]
Length = 398
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + ++K V+L
Sbjct: 168 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQ-AKQKAVDL 221
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 222 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 269
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L R IV G + + +E+ + + + + P++ + K E
Sbjct: 270 LRRRRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 320
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 321 QIAQKIDTYNLSVQPFEDC 339
>gi|227877296|ref|ZP_03995369.1| thiamine-phosphate kinase [Lactobacillus crispatus JV-V01]
gi|227863152|gb|EEJ70598.1| thiamine-phosphate kinase [Lactobacillus crispatus JV-V01]
Length = 405
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS AL R +E + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASWLALKRGVDIEMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + P A + + L + M +Q L A
Sbjct: 227 TGILANYAGKINFIAV-PFAEIQETIKEKLPEGYLMTVQRR------------FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ + G I G + + +++ + + + V P+ + K E
Sbjct: 274 RIRAQRGGWAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
A++IG DL E+
Sbjct: 325 IAKAEEIGTFDLSIQPFEDC 344
>gi|221210354|ref|ZP_03583334.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221169310|gb|EEE01777.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 468
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 34/106 (32%), Gaps = 5/106 (4%)
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G + IV G S YP + + V + P ++ K +
Sbjct: 252 SIGGSLIVTGHEAKHRSCYP----GFTTKLSRFVEALTGKRVKFYHPALFETKGAVLRAL 307
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
D G L S +C + R E + C C C LR+
Sbjct: 308 ADAGENVRAVLGRHRSCSC-DARLTSRDEQMFHCGVCGNCLLRRTA 352
>gi|20808089|ref|NP_623260.1| thiamine biosynthesis ATP pyrophosphatase [Thermoanaerobacter
tengcongensis MB4]
gi|22001998|sp|Q8R9F0|THII_THETN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|20516673|gb|AAM24864.1| Thiamine biosynthesis ATP pyrophosphatase [Thermoanaerobacter
tengcongensis MB4]
Length = 380
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A +L SGG DS + R VE + F + K +
Sbjct: 168 PLGTNGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYF-----HSPPYTSDRAKEKVVDLC 222
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ ++ + + + +I + + ++ + + A
Sbjct: 223 KVLSQYGRGMRLHVVHFTDLQLEIYEKCPARLTTIIMRR-------------MMMKIAEK 269
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + G ++ G + + IE+ + V PL+ + K E
Sbjct: 270 IAQQNGSLALITGESLGQVAS---------QTIESLYVTNSSVSLPVFRPLIGMDKREII 320
Query: 182 KLAQDIGGQDLVNLILEES 200
+AQ IG ++ E+
Sbjct: 321 DIAQKIGTYEISIRPYEDC 339
>gi|145223466|ref|YP_001134144.1| hypothetical protein Mflv_2879 [Mycobacterium gilvum PYR-GCK]
gi|145215952|gb|ABP45356.1| hypothetical protein Mflv_2879 [Mycobacterium gilvum PYR-GCK]
Length = 454
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 76/239 (31%), Gaps = 42/239 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+A+ LFSGG DS T + L+ R+ +S + + + L +
Sbjct: 143 NAVSLFSGGLDSLTGVIDLLEEDPDRRLCLIS------HNEGDQASTAQKTLTAALREHY 196
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E L L ++ + + R+++FL LA +G
Sbjct: 197 GQDRLELRSLFLRPAPAVAGQARPLPPERETTTR--------ARSLLFLTAGLALAASVG 248
Query: 128 IT---NI----VIGVC-------ETDYSGYPDCR---HDTIRAIETAINLGMESHVTVHT 170
I IG+ YS R ++ + TA + + +
Sbjct: 249 PDVPVYIPENGFIGINVPLTRARSGSYST----RTTHPQFMQLLRTAAD-AVGVCNPILN 303
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYLRQ 228
P K E ++ +L+ + S +C + + G C C C +R+
Sbjct: 304 PFRLKTKGEILASSR---NPELLRSLAPNSISCSHPEAARYAVRKQGNCGYCFPCLIRR 359
>gi|317122116|ref|YP_004102119.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermaerobacter marianensis DSM 12885]
gi|315592096|gb|ADU51392.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermaerobacter marianensis DSM 12885]
Length = 407
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 41/199 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A L SGG DS + A+ R V + F + R+K+V+L
Sbjct: 191 RACALLSGGIDSPVAVWMAMKRGLSVIPVHF-----HSPPFTSE-RAREKVVDLTRVLAR 244
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G + + + + + + ++ T R ++F A +A R
Sbjct: 245 WGGAMPLWVVHF------TEVQRAIQLECPPE---LTITLMRRMMF-RIAERIAARERAL 294
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETW 181
+V G ++ + +ES T+ PL+ + K E
Sbjct: 295 ALVTG-----------------ESLGQVASQTLESIRTISAVATLPVLRPLIGMDKTEIV 337
Query: 182 KLAQDIGGQDLVNLILEES 200
+ A+ IG D+ L E+
Sbjct: 338 ERARAIGTYDISILPYEDC 356
>gi|140063954|gb|ABO82466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Liberibacter asiaticus]
Length = 408
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 18/199 (9%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
D K ++ SGG DSS + V ++ Y R + + C + +
Sbjct: 15 DKNPKDMRVVVAMSGGVDSSVVAALLKRDGYDVIGVTVQLYNSRKASKRKGSCCAGQDVY 74
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAA 120
+ ++ + +++ A P V R + F
Sbjct: 75 DARRVCDTINVSHYVFD---YEERFRNAVIVPFASSYAAGETPLPCVDCNRTVKF-SDLL 130
Query: 121 TLAYRLGITNIVIGVCETDYSGYP-D--------CRHDTIRAIETAINLGMESH--VTVH 169
++ +LG + G Y D CR + ++ +
Sbjct: 131 SVTRQLGADVLATG-HYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFLFATTQQQLCDLR 189
Query: 170 TPLMWLKKYETWKLAQDIG 188
PL +KK LA+++G
Sbjct: 190 FPLGDMKKESVRDLAREMG 208
>gi|224543752|ref|ZP_03684291.1| hypothetical protein CATMIT_02968 [Catenibacterium mitsuokai DSM
15897]
gi|224523320|gb|EEF92425.1| hypothetical protein CATMIT_02968 [Catenibacterium mitsuokai DSM
15897]
Length = 398
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 38/198 (19%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPK 66
ALL+ SGG DS + R +E + + Y EL + +V ++
Sbjct: 178 KALLMLSGGIDSPVAGYLTMKRGVDLECIHYASPPY----TNELAREKVL--DLVNVLKD 231
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + HI+P L + ++ AM + + A +A +
Sbjct: 232 YTHGSIKVHIVPFTELQLSVYDHCDESYAMTVMRR------------MMYRIAEGVAKKN 279
Query: 127 GITNIV----IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
IV IG + T+ ++ T + V P+ + K E K
Sbjct: 280 DCLAIVNGESIGQVAS----------QTLESMNTINQVIT---TPVIRPVACMDKLEIIK 326
Query: 183 LAQDIGGQDLVNLILEES 200
+A+ IG D+ E+
Sbjct: 327 IAEKIGTYDISIRPYEDC 344
>gi|198277561|ref|ZP_03210092.1| hypothetical protein BACPLE_03783 [Bacteroides plebeius DSM 17135]
gi|198270059|gb|EDY94329.1| hypothetical protein BACPLE_03783 [Bacteroides plebeius DSM 17135]
Length = 402
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 14/132 (10%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+++ ++ FSGG D S T + A ++ V + G + +L+ K+ +
Sbjct: 1 MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKKNEENAYKLGAV 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L + + + + IF A
Sbjct: 61 KYVTLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARY 108
Query: 123 AYRLGITNIVIG 134
A +G I G
Sbjct: 109 ANEIGAHAIAHG 120
>gi|73662357|ref|YP_301138.1| thiamine biosynthesis protein ThiI [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|123642827|sp|Q49YE8|THII_STAS1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|72494872|dbj|BAE18193.1| putative thiamine biosynthesis ATP pyrophosphatase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 407
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R VE + F + ++K++EL
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMRRGVTVEAIHF-----HSPPFTSEK-AKEKVIELTRILSG 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + + +T R ++ A + + +
Sbjct: 233 HVGPIKLHIVPFTDL-------QKQVNKVVHERYTMTST----RRMMM-RVADKVVHDID 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + + V PL+ L K + K A++I
Sbjct: 281 AHAIVNGENLGQVAS---------QTLKSMYAINHVTSTPVLRPLLTLDKEDIVKKAKEI 331
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 332 GTFDVSIQPYEDC 344
>gi|317153295|ref|YP_004121343.1| hypothetical protein Daes_1584 [Desulfovibrio aespoeensis Aspo-2]
gi|316943546|gb|ADU62597.1| hypothetical protein Daes_1584 [Desulfovibrio aespoeensis Aspo-2]
Length = 700
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 83/243 (34%), Gaps = 44/243 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++FSGG DS L+ A+D L + K+V + K L
Sbjct: 157 VVMFSGGLDS---LAGAIDE---------------------VLNEKHKVVLVTHKSTPKL 192
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVP-GRNIIFLVFAATLAYRLGIT 129
H ++ D + + ++ +++ N L + R+ +++ AT+A L +
Sbjct: 193 NTRHRRLEKMIADKAGENAPLHIGVRVNKNKGLNYEYTQRSRSFLYVSIGATIAKMLNLK 252
Query: 130 NIVIGVCETDYSGYPDCR------------HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
++ P C IR + I+L T+ P +W K
Sbjct: 253 SVRFYENGVISLNLPVCAQVVGGRATRTTHPRVIRGFQEIISLVAGEPFTIENPYIWKTK 312
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
++ G QD++ +HT + C +C C R+ + K
Sbjct: 313 AGVIEVITKAGCQDMIAASTTCTHT------WEMTNHHTHCGTCSQCIDRRFAMIAAKAD 366
Query: 238 YQD 240
D
Sbjct: 367 QHD 369
>gi|152977014|ref|YP_001376531.1| thiamine biosynthesis protein ThiI [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|189030620|sp|A7GTS8|THII_BACCN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|152025766|gb|ABS23536.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
cytotoxicus NVH 391-98]
Length = 403
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 60/197 (30%), Gaps = 37/197 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHI----LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + I +I S + + +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYTMTVMRRMMMRITER-----------------IA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
I G + + +++ + ++ V PL+ + K E K+
Sbjct: 278 EERNALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVLRPLITMDKLEIIKI 328
Query: 184 AQDIGGQDLVNLILEES 200
A +IG D+ E+
Sbjct: 329 ANEIGTYDISIRPYEDC 345
>gi|313638006|gb|EFS03295.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
seeligeri FSL S4-171]
Length = 403
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+AQ I +L E+
Sbjct: 326 TIAQKIDTYNLSVQPFEDC 344
>gi|313633061|gb|EFR99972.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
seeligeri FSL N1-067]
Length = 403
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+AQ I +L E+
Sbjct: 326 TIAQKIDTYNLSVQPFEDC 344
>gi|289434873|ref|YP_003464745.1| thiamine biosynthesis protein ThiI [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289171117|emb|CBH27659.1| thiamine biosynthesis protein ThiI [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 403
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
+AQ I +L E+
Sbjct: 326 TIAQKIDTYNLSVQPFEDC 344
>gi|115523063|ref|YP_779974.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
BisA53]
gi|115517010|gb|ABJ04994.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopseudomonas palustris BisA53]
Length = 419
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSST + V ++ Y + + C + I + +
Sbjct: 34 RVVVAMSGGVDSSTTAALLKAEGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARTVAE 93
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R+I F + A
Sbjct: 94 RIGIPHYVLD---YESRFRESVIDSFATSYATGETP---VPCIECNRSIKFRDL-LSTAR 146
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLMWLKK 177
LG + G PD + A + E + PL + K
Sbjct: 147 ELGAAVLATG-HYVSSRRLPDGSRALVCAADADRDQSYFLFATTREQLDFLRFPLGDMTK 205
Query: 178 YETWKLAQDIG 188
+T +LA+ G
Sbjct: 206 PQTRELARSFG 216
>gi|205821605|sp|Q07SU0|MNMA_RHOP5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 400
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSST + V ++ Y + + C + I + +
Sbjct: 15 RVVVAMSGGVDSSTTAALLKAEGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARTVAE 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R+I F + A
Sbjct: 75 RIGIPHYVLD---YESRFRESVIDSFATSYATGETP---VPCIECNRSIKFRDL-LSTAR 127
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLMWLKK 177
LG + G PD + A + E + PL + K
Sbjct: 128 ELGAAVLATG-HYVSSRRLPDGSRALVCAADADRDQSYFLFATTREQLDFLRFPLGDMTK 186
Query: 178 YETWKLAQDIG 188
+T +LA+ G
Sbjct: 187 PQTRELARSFG 197
>gi|75674462|ref|YP_316883.1| hypothetical protein Nwi_0264 [Nitrobacter winogradskyi Nb-255]
gi|74419332|gb|ABA03531.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 452
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 39/125 (31%), Gaps = 24/125 (19%)
Query: 118 FAATLAYR---------LGI--TNIVIGVCETDYSGYPDCR--HDTIRAIETAINLGMES 164
AA LA G +V YPD R +E +N
Sbjct: 218 IAAYLAEADVILVPESGQGAFGPALVTVAHA-----YPDYRNHPLFTSRMERFLNALFRR 272
Query: 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKR-DKRYEWGYGCNSCPA 223
V P +W K ET + + G +++ +C+ R C C A
Sbjct: 273 PVRFVFPRLWHTKAETLREYAALPGSK-----WDDTKSCWRNARWSALNGNLVQCGICAA 327
Query: 224 CYLRQ 228
C LR+
Sbjct: 328 CMLRR 332
>gi|312870435|ref|ZP_07730555.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
oris PB013-T2-3]
gi|311093992|gb|EFQ52316.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
oris PB013-T2-3]
Length = 406
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 71/197 (36%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +++ SGG DS + R +E + F + L K++ E
Sbjct: 174 PVGTAGKGMMMLSGGIDSPVAAYLGMKRGVSMEMVHFFSPPYTSPQ---ALAKAKQLTEK 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ S+ + + + + V K+ + L V R + L A +
Sbjct: 231 LAKYSGSIK---------FIQVPFTEIQETVKEKVPEGYLMT--VQRR--MMLRLATAIM 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + ++ V P++ K E K+
Sbjct: 278 EKRHGLAIFNGESLGQVAS---------QTMESMMAIEDVTNYPVLRPVLSFDKTEIIKI 328
Query: 184 AQDIGGQDLVNLILEES 200
A++I DL L E+
Sbjct: 329 AENIDTYDLSILPYEDC 345
>gi|224536323|ref|ZP_03676862.1| hypothetical protein BACCELL_01195 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522062|gb|EEF91167.1| hypothetical protein BACCELL_01195 [Bacteroides cellulosilyticus
DSM 14838]
Length = 401
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 14/132 (10%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+++ ++ FSGG D S T + A ++ V + G + +L+ K+
Sbjct: 1 MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAK 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L + + + + IF A
Sbjct: 61 EYVTIDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARY 108
Query: 123 AYRLGITNIVIG 134
A +G I G
Sbjct: 109 ANEIGADAIAHG 120
>gi|72161442|ref|YP_289099.1| thiamine biosynthesis protein ThiI [Thermobifida fusca YX]
gi|71915174|gb|AAZ55076.1| thiamine biosynthesis protein [Thermobifida fusca YX]
Length = 422
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + L+L SGG DS + R R++ L F + + K +
Sbjct: 197 PVGMSGRGLVLLSGGIDSPVAAYRMMRRGLRLDFLHFS-----GMPFTGPESIYKAYSLV 251
Query: 64 MPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ G +++P +S + + + Q + L A L
Sbjct: 252 RQLDRFQNGSRLYVVPFGKAQQQLRNSGAERLQIVAQRR------------LMLKTAEAL 299
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A RL + +V G D G + + + L + + PL+ + K E
Sbjct: 300 ADRLNASALVTG----DALG-----QVSSQTLANITALDDAVDLPILRPLIGMDKTEIMD 350
Query: 183 LAQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 351 QARAIGTLTISELPDEDC 368
>gi|15896224|ref|NP_349573.1| thiamine biosynthesis protein ThiI [Clostridium acetobutylicum ATCC
824]
gi|20140711|sp|Q97EY4|THII_CLOAB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|15026026|gb|AAK80913.1|AE007794_5 Thiamine biosynthesis enzyme, THII [Clostridium acetobutylicum ATCC
824]
gi|325510379|gb|ADZ22015.1| Thiamine biosynthesis enzyme, THII [Clostridium acetobutylicum EA
2018]
Length = 384
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 66/195 (33%), Gaps = 25/195 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K LL+ SGG DS R V + F + + K+ +L
Sbjct: 169 KTNGQTLLMLSGGIDSPVAGYMMARRGVEVSGVYF-----HSAPYTSE-RAKDKVKDLAR 222
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+GE + + + + + K +++ L T + R + A +A
Sbjct: 223 ILTKYIGEMTLYVVPF------TDIQMQIIEKCREDEL--TIIMRR--FMMSIACKIAED 272
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+ ++ G + + ++ + + V PL+ + K + +++
Sbjct: 273 KGMESVATGESIGQVAS---------QTMQGLVVSNDCADRPVFRPLISMDKIDIMDISR 323
Query: 186 DIGGQDLVNLILEES 200
IG + L E+
Sbjct: 324 KIGTYETSILPYEDC 338
>gi|329956211|ref|ZP_08296891.1| putative argininosuccinate synthase [Bacteroides clarus YIT 12056]
gi|328524685|gb|EGF51746.1| putative argininosuccinate synthase [Bacteroides clarus YIT 12056]
Length = 404
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 14/130 (10%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K ++ FSGG D S T + A ++ V + G + +L+ K+ +
Sbjct: 4 KKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAVKY 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
D E + L + + + + IF A A
Sbjct: 64 ITLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARYAN 111
Query: 125 RLGITNIVIG 134
+G I G
Sbjct: 112 EIGADAIAHG 121
>gi|228999432|ref|ZP_04159011.1| thiamine biosynthesis protein thiI [Bacillus mycoides Rock3-17]
gi|228760377|gb|EEM09344.1| thiamine biosynthesis protein thiI [Bacillus mycoides Rock3-17]
Length = 403
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 61/193 (31%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAFLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKVANAI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|189464269|ref|ZP_03013054.1| hypothetical protein BACINT_00608 [Bacteroides intestinalis DSM
17393]
gi|189438059|gb|EDV07044.1| hypothetical protein BACINT_00608 [Bacteroides intestinalis DSM
17393]
Length = 401
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 14/132 (10%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ ++ FSGG D S T + A ++ V + G + +L+ K+
Sbjct: 1 MEDKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAK 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L + + + + IF A
Sbjct: 61 EYVTIDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARY 108
Query: 123 AYRLGITNIVIG 134
A +G I G
Sbjct: 109 ANEIGADAIAHG 120
>gi|188586959|ref|YP_001918504.1| thiamine biosynthesis/tRNA modification protein ThiI
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|229559992|sp|B2A8M8|THII_NATTJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|179351646|gb|ACB85916.1| thiamine biosynthesis/tRNA modification protein ThiI
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 413
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 24/193 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
+L+ SGG DS A+ R +V L F + + ++K I +++ ++
Sbjct: 185 KGVLMLSGGIDSPVAGWLAMKRGIQVVGLHF-----HSYPFTSQRALKKVEDISQVLSRY 239
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L DI + ++ T R +F A +A +
Sbjct: 240 GTGPTGGFKLITNHFTDI------QKAIQNYCSESMWVTV--MRRFMFY-IANRMAQKEQ 290
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G + T+ ++ ++ + PL L K E A+ I
Sbjct: 291 AMTVVTGENVGQVAS------QTLESMHAVSQ--DVVNLPILRPLAGLDKKEIMSKAETI 342
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 343 GTYDISIRPYEDC 355
>gi|228993379|ref|ZP_04153295.1| thiamine biosynthesis protein thiI [Bacillus pseudomycoides DSM
12442]
gi|228766447|gb|EEM15090.1| thiamine biosynthesis protein thiI [Bacillus pseudomycoides DSM
12442]
Length = 403
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 61/193 (31%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
++L SGG DS + R VE + F + +K + + + K+
Sbjct: 180 KVMVLLSGGIDSPVAAFLTMKRGVSVEAVHF-----HSPPFTSERAKQKVIDLAQELTKY 234
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + I+ + ++ + T R +A
Sbjct: 235 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITE---R----------IAEERN 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I G + + +++ + ++ V PL+ + K E K+A I
Sbjct: 282 ALAITTGESLGQVAS---------QTLDSMHTINEVTNYPVIRPLITMDKLEIIKVANAI 332
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 333 GTYDISIRPYEDC 345
>gi|313618712|gb|EFR90637.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
innocua FSL S4-378]
Length = 403
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AGKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVAMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|16800702|ref|NP_470970.1| thiamine biosynthesis protein ThiI [Listeria innocua Clip11262]
gi|20140657|sp|Q92BB6|THII_LISIN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|16414121|emb|CAC96865.1| lin1634 [Listeria innocua Clip11262]
Length = 403
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AGKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVAMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|254172603|ref|ZP_04879278.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermococcus
sp. AM4]
gi|214033532|gb|EEB74359.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermococcus
sp. AM4]
Length = 380
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 63/190 (33%), Gaps = 24/190 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SGG DS + R V + G E L +KI + K+
Sbjct: 181 KVVALLSGGIDSPVAAFLMMKRGVEVIPVHIYMG-------EKTLEKVRKIWNQLKKYHY 233
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ I+ + ++ F + + A +A G
Sbjct: 234 GGKAELIVVKPKERE-----RILEKLRELGKEKYTCVFCKF---MMVRHADKIAKDFGAK 285
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV+G D G + +E + S + ++ PL+ + K E +A+ IG
Sbjct: 286 GIVMG----DSLG-----QVASQTLENMYIVSQASDLPIYRPLIGMDKEEIVSIAKRIGT 336
Query: 190 QDLVNLILEE 199
+L L +E
Sbjct: 337 FELSTLPEDE 346
>gi|330961945|gb|EGH62205.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 484
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQVMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVATHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|313500748|gb|ADR62114.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 422
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 82/263 (31%), Gaps = 71/263 (26%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + +++L SGG DS +++ + +S +IV
Sbjct: 130 QALHPSEDSVVLLSGGLDSLIGAIDLVEQGVKPYAVS-------------------QIVR 170
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +D + L L ++ S + + + R+IIFL F +
Sbjct: 171 GDGEKQDRFAKSLGLERLGLNHVTKSPGQQEPSQR------------ARSIIFLAFGLAV 218
Query: 123 AYRLG------------ITNIVIGVC-------------ETDYSGYPDCRHDTIRAIETA 157
L N I + T + + + ++
Sbjct: 219 GTSLDRYHRGQTVPLYICENGFIAINPPLTMSRLGSLSTRTAH-------PEYLGRLQQI 271
Query: 158 INLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
++ +V + P + K E + Q+L+ S +C R +R+ +
Sbjct: 272 LDAA-GINVQIRNPYALMTKGEMLAACR---NQELLKEHAVASTSC---GRFQRFGY-KH 323
Query: 218 CNSCPACYLRQKGWMEFKEKYQD 240
C C C +R+ + ++ D
Sbjct: 324 CGRCVPCQVRRASFKQWSAIRDD 346
>gi|261403856|ref|YP_003248080.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanocaldococcus vulcanius M7]
gi|261370849|gb|ACX73598.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanocaldococcus vulcanius M7]
Length = 376
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 60/186 (32%), Gaps = 31/186 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL L S G DS + R RV L + E L +KIVE++ +
Sbjct: 186 RALCLISDGIDSPVAAFMMIRRGCRVVLL-------HLKMSEEALNKVRKIVEILSDYDT 238
Query: 70 SLGE---DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L D+ + L + +N N L A A L
Sbjct: 239 DLEFVVYDYKKDMNNLIEKLSQIKKENYTCIFCKKN------------MLKVAKKYAKYL 286
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I+ G + + ++ + + PL+ L K E K+A++
Sbjct: 287 DCDAIITGDNLGQVAS---------QTLKNLRVISEGVDYLILRPLIGLDKDEIIKIAKN 337
Query: 187 IGGQDL 192
IG ++
Sbjct: 338 IGTYEI 343
>gi|150020038|ref|YP_001305392.1| thiamine biosynthesis protein ThiI [Thermosipho melanesiensis
BI429]
gi|149792559|gb|ABR30007.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermosipho
melanesiensis BI429]
Length = 389
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 30/196 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
A+LL SGG DS + L R ++ETLSF +K + ++ K+
Sbjct: 175 KAILLLSGGIDSPVAGWYMLKRGLKIETLSFL-----SPPFTSEKSAKKVLDLASILAKY 229
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ +I+ + + ++ +Q + + A L+ +
Sbjct: 230 SPEPIKANIVSFTEVQQYIKKNAPDKYSLILQRRS------------MMRIANKLSRKRH 277
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ G + + + ++ S+V V PL+ +K + + A++I
Sbjct: 278 AKALITGENIAQVAS---------QTLSNLASIEDASNVPVLRPLIGFEKIDIVEKAKEI 328
Query: 188 GGQDLVNLILEESHTC 203
G ++ L + +C
Sbjct: 329 GTYEISILPYID--SC 342
>gi|124027451|ref|YP_001012771.1| thiamine biosynthesis protein ThiI [Hyperthermus butylicus DSM
5456]
gi|123978145|gb|ABM80426.1| probable thiamine biosynthesis protein, ThiI [Hyperthermus
butylicus DSM 5456]
Length = 388
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 27/181 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+LFSGG DS + R V+ L F + + +++ + +
Sbjct: 181 RALVLFSGGLDSPVAAWYTAKRGVEVDLLHF------ILAVPASARDAERVGRRLAELWL 234
Query: 70 SLGEDH--ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ + S+ + + + A +A + G
Sbjct: 235 YGYKPKLFLVDFRPVTVTIASNTRRGYEQIVLR------------LAMYYAAQLIAEKHG 282
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G S T++ + A+ + + + PL + K E + + I
Sbjct: 283 YDAVVTGESIGQVSS------QTLKNM-KAMAQALPLRLPLIRPLAGMDKEEIVTVCRRI 335
Query: 188 G 188
G
Sbjct: 336 G 336
>gi|295425097|ref|ZP_06817802.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
amylolyticus DSM 11664]
gi|295065156|gb|EFG56059.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
amylolyticus DSM 11664]
Length = 406
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R +E + F Y E L K++
Sbjct: 174 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVEIEMVHFFSPPY------TTEKALAKAKEL 227
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + + + + + KI + L V R L A
Sbjct: 228 TGILANYCGKI---------NFIAVPFAEIQETIKEKIPEGYLMT--VQRR--FMLQLAD 274
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ + G I G + + +++ + + + V P+ + K E
Sbjct: 275 RIRAKRGGLAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEI 325
Query: 181 WKLAQDIGGQDLVNLILEES 200
A+ IG DL E+
Sbjct: 326 IDRAEKIGTFDLSIQPFEDC 345
>gi|224026530|ref|ZP_03644896.1| hypothetical protein BACCOPRO_03287 [Bacteroides coprophilus DSM
18228]
gi|224019766|gb|EEF77764.1| hypothetical protein BACCOPRO_03287 [Bacteroides coprophilus DSM
18228]
Length = 402
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 14/132 (10%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+++ ++ FSGG D S T + A ++ V + G + +L+ K+ +
Sbjct: 1 MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKQNEENAYKLGAV 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L + + + + IF A
Sbjct: 61 KYVTLDVTQEYYAKSLKYM-IFGNVLRNGTYPISVSSER-----------IFQALAIARY 108
Query: 123 AYRLGITNIVIG 134
A +G I G
Sbjct: 109 ANEIGAHAIAHG 120
>gi|189463254|ref|ZP_03012039.1| hypothetical protein BACCOP_03971 [Bacteroides coprocola DSM 17136]
gi|189429984|gb|EDU98968.1| hypothetical protein BACCOP_03971 [Bacteroides coprocola DSM 17136]
Length = 402
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 14/132 (10%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+++ ++ FSGG D S T + A ++ V + G + +L+ K+ +
Sbjct: 1 MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKQNEENAYKLGAV 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L + + + + IF A
Sbjct: 61 KYVTLDVTQEYYAKSLKYM-IFGNVLRNGTYPISVSSER-----------IFQALAIARY 108
Query: 123 AYRLGITNIVIG 134
A +G I G
Sbjct: 109 ANEIGAHAIAHG 120
>gi|39938629|ref|NP_950395.1| thiamine biosynthesis protein ThiI [Onion yellows phytoplasma OY-M]
gi|39721738|dbj|BAD04228.1| thiamine biosynthesis protein [Onion yellows phytoplasma OY-M]
Length = 434
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 23/201 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+L SGG DS A+ + VE L F+ LE V L +
Sbjct: 191 VLMSGGIDSPVAAYLAMKKGITVELLHFE--SSPLTPLESIQKVIDLAKVLSRYAFGNQI 248
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ H++P L + ++ + + + + A+ A++ ++
Sbjct: 249 KLHLVPFRYLQETITKTVLDSYIINVMRR------------MMYRLASQFAFQKNHLCLI 296
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + T+ +++T + + +T+ PL+ + K E K+A+ I D+
Sbjct: 297 NGESVGQVAS------QTLESMQTTTQV---TSMTILRPLVTMDKNEIIKIAKQIDTFDI 347
Query: 193 VNLILEESHTCYLGKRDKRYE 213
+ T YL +
Sbjct: 348 SIRAFHDCCTLYLPQNPTTKP 368
>gi|218132034|ref|ZP_03460838.1| hypothetical protein BACEGG_03659 [Bacteroides eggerthii DSM 20697]
gi|317477201|ref|ZP_07936441.1| argininosuccinate synthase [Bacteroides eggerthii 1_2_48FAA]
gi|217985794|gb|EEC52134.1| hypothetical protein BACEGG_03659 [Bacteroides eggerthii DSM 20697]
gi|316906637|gb|EFV28351.1| argininosuccinate synthase [Bacteroides eggerthii 1_2_48FAA]
Length = 402
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 14/130 (10%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K ++ FSGG D S T + A ++ V + G + +L+ K+ +
Sbjct: 4 KKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAVKY 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
D E + L + + + + IF A A
Sbjct: 64 ITLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARYAN 111
Query: 125 RLGITNIVIG 134
+G I G
Sbjct: 112 EIGADAIAHG 121
>gi|294501539|ref|YP_003565239.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
megaterium QM B1551]
gi|295706887|ref|YP_003599962.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
megaterium DSM 319]
gi|294351476|gb|ADE71805.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
megaterium QM B1551]
gi|294804546|gb|ADF41612.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
megaterium DSM 319]
Length = 403
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 77/194 (39%), Gaps = 31/194 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW-- 67
A+L+ SGG DS A+ R +E + F Y E ++K+++L K
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGLEIEAVHF-YSPPFTSERS-----KQKVIDLTQKLTA 232
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRL 126
+ HI+P +++ + + +I +N + +T R + L + +
Sbjct: 233 YHEKVKLHIVPF--------TAVQQAIQKQIPENYTMTST----RRM-MLRITDLIREKN 279
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
IV G D G + +E+ + ++ + PL+ + K E ++A+
Sbjct: 280 ESLAIVTG----DSLG-----QVASQTVESMYAINEVTNTPILRPLVTMDKTEIVEIARK 330
Query: 187 IGGQDLVNLILEES 200
I ++ N E+
Sbjct: 331 IDTHEISNRPYEDC 344
>gi|220925891|ref|YP_002501193.1| tRNA-specific 2-thiouridylase MnmA [Methylobacterium nodulans ORS
2060]
gi|254811453|sp|B8IU32|MNMA_METNO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|219950498|gb|ACL60890.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium nodulans ORS 2060]
Length = 382
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 66/201 (32%), Gaps = 18/201 (8%)
Query: 1 MNDI-IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
MN + + KAP ++ SGG DSS + V ++ Y C
Sbjct: 1 MNSLDLPKAPQDTRVVVAMSGGVDSSVVAGLLKRQGYDVVGITLQLYDHGAATHRRGACC 60
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNII 114
+ I + + ++L D ++ A P V R+I
Sbjct: 61 AGQDIHDARRAAETLGIPHYVLD---YEDRFREAVIDRFADSYIHGETPIPCVECNRSIK 117
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTV 168
F AT A LG + G P RA++ A + + V
Sbjct: 118 FRDLLAT-ALDLGADALATG-HYVASRPRPGGSRALYRALDPARDQSYFLYATTAEQLDV 175
Query: 169 -HTPLMWLKKYETWKLAQDIG 188
PL L K ET +LA++ G
Sbjct: 176 LRFPLGELPKDETRRLAREFG 196
>gi|304385270|ref|ZP_07367615.1| thiamine biosynthesis/tRNA modification protein ThiI [Pediococcus
acidilactici DSM 20284]
gi|304328477|gb|EFL95698.1| thiamine biosynthesis/tRNA modification protein ThiI [Pediococcus
acidilactici DSM 20284]
Length = 405
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +++ SGG DS + R +E + F E L K++
Sbjct: 173 PVGTAGKGMMMLSGGIDSPVAAYLGMKRGVEMEMVHFFSPPYTS---EQALAKAKELSGK 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + ++ + +P A + + + M IQ + L LA
Sbjct: 230 LAAYSGNV-QFLQVPFAEIQETIKEKCPEGYLMTIQRR------------MMLRLTVALA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +E+ + + + + + P++ + K E ++
Sbjct: 277 QKRGGLAIFNGESLGQVAS---------QTMESMMAINDVTTMPIIRPVVSMDKNEIIEI 327
Query: 184 AQDIGGQDLVNLILEES 200
A++I DL + E+
Sbjct: 328 AKEIDTYDLSIMPFEDC 344
>gi|270290998|ref|ZP_06197221.1| thiamine biosynthesis/tRNA modification protein ThiI [Pediococcus
acidilactici 7_4]
gi|270280394|gb|EFA26229.1| thiamine biosynthesis/tRNA modification protein ThiI [Pediococcus
acidilactici 7_4]
Length = 405
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +++ SGG DS + R +E + F E L K++
Sbjct: 173 PVGTAGKGMMMLSGGIDSPVAAYLGMKRGVEMEMVHFFSPPYTS---EQALAKAKELSGK 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + ++ + +P A + + + M IQ + L LA
Sbjct: 230 LAAYSGNV-QFLQVPFAEIQETIKEKCPEGYLMTIQRR------------MMLRLTVALA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +E+ + + + + + P++ + K E ++
Sbjct: 277 QKRGGLAIFNGESLGQVAS---------QTMESMMAINDVTTMPIIRPVVSMDKNEIIEI 327
Query: 184 AQDIGGQDLVNLILEES 200
A++I DL + E+
Sbjct: 328 AKEIDTYDLSIMPFEDC 344
>gi|330940535|gb|EGH43609.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 484
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + + K+ ++++ V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFE----EVLEEILQKVDNSHMG--VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVATHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|313901928|ref|ZP_07835346.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermaerobacter subterraneus DSM 13965]
gi|313467823|gb|EFR63319.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermaerobacter subterraneus DSM 13965]
Length = 404
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A L SGG DS + A+ R + F + R+K+V+L
Sbjct: 190 RACALLSGGIDSPVAVWMAMKRGLVPICVHF-----HSPPFTSE-RAREKVVDLTRVLAR 243
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G LPL ++ + + + + ++ T R ++F LA R+
Sbjct: 244 WGGP---LPLWVVHF---TEVQRAIQLECPPE---LTITLMRRMMF-----RLAERIAAR 289
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+ + + G + +E+ + + + V PL+ + K E + A+ IG
Sbjct: 290 ERALALVTGESLG-----QVASQTLESIRTISAVATLPVLRPLIGMDKAEIVERARAIGT 344
Query: 190 QDLVNLILEES 200
D L E+
Sbjct: 345 YDTSVLPYEDC 355
>gi|295689108|ref|YP_003592801.1| hypothetical protein Cseg_1700 [Caulobacter segnis ATCC 21756]
gi|295431011|gb|ADG10183.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
Length = 458
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 37/128 (28%), Gaps = 20/128 (15%)
Query: 113 IIFLVFAATLAYRLGITNIVIG---------VCETDYSGYPDCR--HDTIRAIETAINLG 161
+ AA LA IV+ V YPD R +E
Sbjct: 218 AVITGIAAVLAK---ADKIVVTESGQGALGPVLTVSGQAYPDYRVHPAFTMRVERLFATL 274
Query: 162 MESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTC-YLGKRDKRYEWGYGCNS 220
+ P +W K ET A Q E+ +C ++ C
Sbjct: 275 LGHSAHYDFPRLWSTKGETIAEAARATPQ-----PWAETRSCWQQSRQVGMGGKQRQCGV 329
Query: 221 CPACYLRQ 228
C AC LR+
Sbjct: 330 CAACMLRR 337
>gi|108804192|ref|YP_644129.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rubrobacter xylanophilus DSM 9941]
gi|123177389|sp|Q1AWB1|MNMA_RUBXD RecName: Full=Bifunctional protein nifU/mnmA; Includes: RecName:
Full=NifU-like protein; Includes: RecName:
Full=tRNA-specific 2-thiouridylase mnmA
gi|108765435|gb|ABG04317.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rubrobacter xylanophilus DSM 9941]
Length = 488
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ SGG DS+ +R V ++F + E R C V +
Sbjct: 143 RRGVVAAMSGGVDSAVTALLLKERGYEVVAVTFR---LHDGEPGSRSCCSPDTVLFARET 199
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG H L ++ + ++ PN V + AA LA RLG
Sbjct: 200 AHGLGIPHF--TLNLRELFDRRVMRDFVGSYAAGRTPNPCVACNAHVKFHAAAFLADRLG 257
Query: 128 ITNIVIG 134
+ ++ G
Sbjct: 258 LRHVATG 264
>gi|314933867|ref|ZP_07841232.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus caprae C87]
gi|313654017|gb|EFS17774.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus caprae C87]
Length = 407
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + + K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHF-----HSPPFTSEK-AKDKVIELTRILSE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ + L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQINKVVHPRYTMTST----RRMMM-RVSDALVHKIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + + V PL+ L K + K A+DI
Sbjct: 281 ANAIVNGENLGQVAS---------QTLKSMYAINHVTSTPVLRPLLTLDKEDIIKKARDI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTYETSIQPFEDC 344
>gi|223043602|ref|ZP_03613647.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus capitis SK14]
gi|222443090|gb|EEE49190.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus capitis SK14]
Length = 407
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + + K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHF-----HSPPFTSEK-AKDKVIELTRILSE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ + L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQINKVVHPRYTMTST----RRMMM-RVSDALVHKIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + + V PL+ L K + K A+DI
Sbjct: 281 ANAIVNGENLGQVAS---------QTLKSMYAINHVTSTPVLRPLLTLDKEDIIKKARDI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTYETSIQPFEDC 344
>gi|167035804|ref|YP_001671035.1| hypothetical protein PputGB1_4813 [Pseudomonas putida GB-1]
gi|166862292|gb|ABZ00700.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 422
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 82/263 (31%), Gaps = 71/263 (26%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + +++L SGG DS +++ + +S +IV
Sbjct: 130 QALHPSEDSVVLLSGGLDSLIGAIDLVEQGVKPYAVS-------------------QIVR 170
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ +D + L L ++ S + + + R+IIFL F +
Sbjct: 171 GDGEKQDRFAKSLGLERLGLNHVTKSPGQQEPSQR------------ARSIIFLAFGLAV 218
Query: 123 AYRLG------------ITNIVIGVC-------------ETDYSGYPDCRHDTIRAIETA 157
L N I + T + + + ++
Sbjct: 219 GTSLDRYHRGQTVPLYICENGFIAINPPLTMSRLGSLSTRTAH-------PEYLGRLQKI 271
Query: 158 INLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
++ +V + P + K E + Q+L+ S +C R +R+ +
Sbjct: 272 LDAA-GINVQIRNPYALMTKGEMLAACR---NQELLKEHAVASTSC---GRFQRFGY-KH 323
Query: 218 CNSCPACYLRQKGWMEFKEKYQD 240
C C C +R+ + ++ D
Sbjct: 324 CGRCVPCQVRRASFKQWAAIRDD 346
>gi|254780151|ref|YP_003064564.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039828|gb|ACT56624.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Liberibacter
asiaticus str. psy62]
gi|255957544|dbj|BAH96607.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957840|dbj|BAH96814.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957850|dbj|BAH96823.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957860|dbj|BAH96832.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957870|dbj|BAH96841.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957880|dbj|BAH96850.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957890|dbj|BAH96859.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957900|dbj|BAH96868.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957910|dbj|BAH96877.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957920|dbj|BAH96886.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957930|dbj|BAH96895.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957940|dbj|BAH96904.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957950|dbj|BAH96913.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957960|dbj|BAH96922.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957970|dbj|BAH96931.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957980|dbj|BAH96940.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255957990|dbj|BAH96949.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958000|dbj|BAH96958.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958010|dbj|BAH96967.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958020|dbj|BAH96976.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958030|dbj|BAH96985.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958040|dbj|BAH96994.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958050|dbj|BAH97003.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958060|dbj|BAH97012.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958070|dbj|BAH97021.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958080|dbj|BAH97030.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958090|dbj|BAH97039.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958100|dbj|BAH97048.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958110|dbj|BAH97057.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|255958120|dbj|BAH97066.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Liberibacter asiaticus]
gi|283362130|dbj|BAI65917.1| predicted tRNA (5-methylaminomethyl-2-thiouridylate)
methyltransferase [Candidatus Liberibacter asiaticus]
gi|283362140|dbj|BAI65926.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
gi|283362150|dbj|BAI65935.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
gi|283362160|dbj|BAI65944.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
gi|283362170|dbj|BAI65953.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
gi|283362180|dbj|BAI65962.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
gi|283362190|dbj|BAI65971.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
gi|283362200|dbj|BAI65980.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
gi|283362210|dbj|BAI65989.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
gi|283362220|dbj|BAI65998.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
gi|283362230|dbj|BAI66007.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
Liberibacter asiaticus]
Length = 408
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 18/199 (9%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
D K ++ SGG DSS + V ++ Y R + + C + +
Sbjct: 15 DKNPKDMRVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVY 74
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAA 120
+ ++ + +++ A P V R + F
Sbjct: 75 DARRVCDTINVSHYVFD---YEERFRNAVIVPFASSYAAGETPLPCVDCNRTVKF-SDLL 130
Query: 121 TLAYRLGITNIVIGVCETDYSGYP-D--------CRHDTIRAIETAINLGMESH--VTVH 169
++ +LG + G Y D CR + ++ +
Sbjct: 131 SVTRQLGADVLATG-HYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFLFATTQQQLCDLR 189
Query: 170 TPLMWLKKYETWKLAQDIG 188
PL +KK LA+++G
Sbjct: 190 FPLGDMKKESVRDLAREMG 208
>gi|331002889|ref|ZP_08326402.1| tRNA sulfurtransferase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330413182|gb|EGG92556.1| tRNA sulfurtransferase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 394
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
I A+LL SGG DS R RVE + F + K ++
Sbjct: 176 PIGTNGRAMLLLSGGIDSPVAGYMIAKRGVRVEAVYF-----HAPPYTSERAKIKVIELA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ K+ + I I I + + + ++ + A
Sbjct: 231 QLVSKYTGPVNLHIINFTDIQLAIYENCPHDELTIIMRRY-------------MMKIAEK 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A G ++ G + + I++ + + + V PL+ K E
Sbjct: 278 IAVDNGDQALITGESIGQVAS---------QTIQSLLTTDAAATLPVFRPLIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ IG + E+
Sbjct: 329 EISEKIGTYETSIQPYEDC 347
>gi|89100084|ref|ZP_01172953.1| hypothetical protein B14911_23725 [Bacillus sp. NRRL B-14911]
gi|89085174|gb|EAR64306.1| hypothetical protein B14911_23725 [Bacillus sp. NRRL B-14911]
Length = 401
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 71/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS ++ R VE + F Y E ++K+++L K
Sbjct: 179 KAMLMLSGGIDSPVAGYLSMKRGLDVEAVHF-YSPPFTSERS-----KQKVIDLAEKLAG 232
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G+ HI+P + + + +N M + L + + G
Sbjct: 233 YTGQMVLHIVPFTEIQQLIQKQVPENYTMTTTRR------------LMLKITDLVREKHG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ G + + +++ + + V PL+ + K + ++AQ+I
Sbjct: 281 GLAVITGESLGQVAS---------QTLDSMYAINEVTSTPVLRPLITMDKTDIIEIAQEI 331
Query: 188 GGQDLVNLILEES 200
D+ L ++
Sbjct: 332 DTHDISILPYDDC 344
>gi|330987257|gb|EGH85360.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVASHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|289624849|ref|ZP_06457803.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289650741|ref|ZP_06482084.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298489244|ref|ZP_07007261.1| Thiamine biosynthesis protein thiI [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156208|gb|EFH97311.1| Thiamine biosynthesis protein thiI [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330869226|gb|EGH03935.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVASHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|257483877|ref|ZP_05637918.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|320326306|gb|EFW82359.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331695|gb|EFW87633.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330872417|gb|EGH06566.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|331012032|gb|EGH92088.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVASHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|71737034|ref|YP_276939.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557587|gb|AAZ36798.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 505
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 204 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 255
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 256 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 307
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 308 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVASHKQDIVDL 350
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 351 ATEIGTADFAR 361
>gi|325107539|ref|YP_004268607.1| hypothetical protein Plabr_0964 [Planctomyces brasiliensis DSM
5305]
gi|324967807|gb|ADY58585.1| hypothetical protein Plabr_0964 [Planctomyces brasiliensis DSM
5305]
Length = 448
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 79/236 (33%), Gaps = 44/236 (18%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LFSGG DS L+ A+D L+F E E RL + K
Sbjct: 145 CLFSGGLDS---LAGAVD------FLAF--------EPEKRLSLVGHYDPTPGTVKKDQT 187
Query: 73 EDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ L A + + + + ++++ + R+++F+ +A LG
Sbjct: 188 QLKSRLSEAYPNRLDAALVCVGSDQESPESSMRS-----RSLLFVALGICVAEHLGAGVP 242
Query: 132 VI----GVCETDYSGYP----DCR-----HDTIRAIETAI-NLGMESHVTVHTPLMWLKK 177
++ G + P C I ++ + +G++ + PL+ K
Sbjct: 243 LLVPENGTIALNVPLTPARRGSCSTRTTHPHYIDLLQQVLTEVGLDH--AIKNPLLGKTK 300
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG--CNSCPACYLRQKGW 231
E D +L+ ++ ES +C + C C C R+
Sbjct: 301 GEVVSQCLD---PNLIAVVAHESKSCAKPGHKSHWTRKSASQCGQCMPCIYRRAAL 353
>gi|164687601|ref|ZP_02211629.1| hypothetical protein CLOBAR_01242 [Clostridium bartlettii DSM
16795]
gi|164603375|gb|EDQ96840.1| hypothetical protein CLOBAR_01242 [Clostridium bartlettii DSM
16795]
Length = 408
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 60/201 (29%), Gaps = 29/201 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
I A+ L SGG DS R VE + F + + K +
Sbjct: 192 PIGTNGKAMSLLSGGIDSPVASWMVAKRGVEVECIHF-----HTYPFTSEKSMEKVRDLA 246
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ K+ + + L I + + + + + + + A
Sbjct: 247 RILAKYCGKVRLHKVNLLEIQKAVGVNCKEEAMTIISRR-------------FMMRIAEE 293
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ +V G + + I+ + V PL+ + K E
Sbjct: 294 VGKLRRCDALVTGESIGQVAS---------QTIQGLTCTNASVSMPVFRPLIAMDKTEII 344
Query: 182 KLAQDIGGQDLVNLILEESHT 202
+A+ IG + + E+ +
Sbjct: 345 DVAKTIGTFETSIIPEEDCCS 365
>gi|258508254|ref|YP_003171005.1| thiamine biosynthesis protein ThiI [Lactobacillus rhamnosus GG]
gi|257148181|emb|CAR87154.1| Thiamine biosynthesis protein thiI [Lactobacillus rhamnosus GG]
gi|259649571|dbj|BAI41733.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus rhamnosus
GG]
Length = 405
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A L+ SGG DS +AL R +E + F K +L
Sbjct: 173 PVGTAGRAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K +G + + + + + + V + + L V R + L +A
Sbjct: 227 TAKLTPYVGRIYFIEVPF------TEIQEAVKATVPEGYLMT--VQRR--MMLRLTEAIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +E+ + + + + P+ + K E
Sbjct: 277 KQRGDLAIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAE 327
Query: 184 AQDIGGQDLVNLILEES 200
A+ I DL + E+
Sbjct: 328 AEKIDTYDLSIMPFEDC 344
>gi|199597499|ref|ZP_03210928.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus rhamnosus
HN001]
gi|229552051|ref|ZP_04440776.1| thiamine-phosphate kinase [Lactobacillus rhamnosus LMS2-1]
gi|258539465|ref|YP_003173964.1| thiamine biosynthesis protein ThiI [Lactobacillus rhamnosus Lc 705]
gi|199591522|gb|EDY99599.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus rhamnosus
HN001]
gi|229314628|gb|EEN80601.1| thiamine-phosphate kinase [Lactobacillus rhamnosus LMS2-1]
gi|257151141|emb|CAR90113.1| Thiamine biosynthesis protein thiI [Lactobacillus rhamnosus Lc 705]
Length = 405
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A L+ SGG DS +AL R +E + F K +L
Sbjct: 173 PVGTAGRAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K +G + + + + + + V + + L V R + L +A
Sbjct: 227 TAKLTPYVGRIYFIEVPF------TEIQEAVKATVPEGYLMT--VQRR--MMLRLTEAIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +E+ + + + + P+ + K E
Sbjct: 277 KQRGDLAIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAE 327
Query: 184 AQDIGGQDLVNLILEES 200
A+ I DL + E+
Sbjct: 328 AEKIDTYDLSIMPFEDC 344
>gi|315425057|dbj|BAJ46730.1| thiamine biosynthesis protein ThiI [Candidatus Caldiarchaeum
subterraneum]
Length = 398
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 70/207 (33%), Gaps = 43/207 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVE 62
+ + L L SGG DS+ + R RV+ L Y R E V +KI E
Sbjct: 165 PVDSSGRVLSLISGGVDSAVASLLLMKRGCRVDFLHLHSY--RTSDE-----AVDEKIGE 217
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L+ K + L +++ I D V R + L A +
Sbjct: 218 LVEKLTEY----------NLKSTLYTASFTPFYKHIWDKRTRLEIVLFRRYL-LRVAEEI 266
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-------HVTVHTPLMWL 175
A G +V+G ++ + + + + + PL+ L
Sbjct: 267 ALSRGYRALVLG-----------------DSLAQVASQTLPNILAVGQPRIPIFRPLIGL 309
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHT 202
K E +LAQ G + V+ ++ +
Sbjct: 310 DKSEIIELAQKYGVLETVSKPYKDCCS 336
>gi|291166326|gb|EFE28372.1| thiamine biosynthesis/tRNA modification protein ThiI [Filifactor
alocis ATCC 35896]
Length = 395
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 28/193 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
A++L SGG DS R ++E + F + K ++ + + +
Sbjct: 181 KAMVLLSGGIDSPVASYLIAKRGLQIEAVHF-----HSFPFTSERSKEKIEQLAKQLSLY 235
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + L I I+ + + + + + A +A
Sbjct: 236 TEGIRIHMVNLLPIQTKIAEKCPEELMTILSRR-------------FMMRIAEKIALDRN 282
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G + T+ +++ + + V PL+ K + ++A+ I
Sbjct: 283 CGGLVTGESIGQVAS------QTVEGLQST--NAVVKTIPVFRPLISFDKEDIIEVAKKI 334
Query: 188 GGQDLVNLILEES 200
G D+ + E+
Sbjct: 335 GTFDISIIPEEDC 347
>gi|116629858|ref|YP_815030.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus gasseri
ATCC 33323]
gi|238853949|ref|ZP_04644306.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
gasseri 202-4]
gi|282851628|ref|ZP_06260993.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
gasseri 224-1]
gi|311110504|ref|ZP_07711901.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
gasseri MV-22]
gi|122273204|sp|Q042N0|THII_LACGA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|116095440|gb|ABJ60592.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus gasseri
ATCC 33323]
gi|238833394|gb|EEQ25674.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
gasseri 202-4]
gi|282557596|gb|EFB63193.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
gasseri 224-1]
gi|311065658|gb|EFQ45998.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
gasseri MV-22]
Length = 405
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 70/200 (35%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R ++ + F Y E L K++
Sbjct: 173 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVEIDMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + + + + + K+ + L + R L A
Sbjct: 227 TGILANYSGKI---------NFIAVPFTEIQEQIKEKLPEGYLMT--IQRR--FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ + G I G + + +E+ + + + V P+ + K E
Sbjct: 274 RIRAKRGGLAIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+ IG DL E+
Sbjct: 325 IKLAEQIGTFDLSIEPFEDC 344
>gi|159045765|ref|YP_001534559.1| hypothetical protein Dshi_3225 [Dinoroseobacter shibae DFL 12]
gi|157913525|gb|ABV94958.1| hypothetical protein Dshi_3225 [Dinoroseobacter shibae DFL 12]
Length = 479
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 67/237 (28%), Gaps = 52/237 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L+FSGG DS + + RV +S + + R L + +
Sbjct: 39 VLMFSGGLDSLSGAVEEIAEHGQRVALVS------HFSATKIAPVQRYMQRSLADAFGAN 92
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + + ++G ++ R+ +F A A +
Sbjct: 93 TCQHVPVQVQMMGRSLKEGTHRS-----------------RSFLFAALGAITAEAFDLNR 135
Query: 131 I-----------------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
+ V+G T + T+ + + + V P
Sbjct: 136 VSFHENGVVSLNLPPVGNVLGTRATRTTH-----PQTLSRFTALLGQVFQGAMRVDNPYF 190
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
W K E + + + + + S +C + C C C R +G
Sbjct: 191 WRTKKEVVETIARLNMAEQIAV----SRSC--ADVHNQTRQHPHCGRCSQCIDRLEG 241
>gi|160888019|ref|ZP_02069022.1| hypothetical protein BACUNI_00425 [Bacteroides uniformis ATCC 8492]
gi|270295613|ref|ZP_06201814.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317478596|ref|ZP_07937753.1| argininosuccinate synthase [Bacteroides sp. 4_1_36]
gi|156862518|gb|EDO55949.1| hypothetical protein BACUNI_00425 [Bacteroides uniformis ATCC 8492]
gi|270274860|gb|EFA20721.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316905237|gb|EFV27034.1| argininosuccinate synthase [Bacteroides sp. 4_1_36]
Length = 401
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 14/132 (10%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++K ++ FSGG D S T + ++ V + G + +L+ K+
Sbjct: 1 MEKKKKVVVAFSGGLDTSFTVMYLTKEKGYEVYAACANTGGFSAEQLKTNEENAYKLGAK 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L + + + + IF A
Sbjct: 61 EYVTLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARY 108
Query: 123 AYRLGITNIVIG 134
A +G I G
Sbjct: 109 ANEIGADAIAHG 120
>gi|330982292|gb|EGH80395.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATEKLVLRPLVATHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|330972968|gb|EGH73034.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVATHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|302189385|ref|ZP_07266058.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
syringae 642]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVATHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|255027790|ref|ZP_05299776.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
J2-003]
Length = 310
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 29/186 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + +K I +L
Sbjct: 150 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQAKQKAI-DL 203
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 204 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 251
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 252 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 302
Query: 182 KLAQDI 187
++AQ I
Sbjct: 303 QIAQKI 308
>gi|213971000|ref|ZP_03399121.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
T1]
gi|301382256|ref|ZP_07230674.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
Max13]
gi|302059550|ref|ZP_07251091.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
K40]
gi|302133556|ref|ZP_07259546.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213924236|gb|EEB57810.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
T1]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVATHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|66048040|ref|YP_237881.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
syringae B728a]
gi|75500200|sp|Q4ZLX9|THII_PSEU2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|63258747|gb|AAY39843.1| Thiamine biosynthesis protein [Pseudomonas syringae pv. syringae
B728a]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVATHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|28867590|ref|NP_790209.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
str. DC3000]
gi|37999600|sp|Q88AM9|THII_PSESM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|28850825|gb|AAO53904.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
str. DC3000]
gi|330874601|gb|EGH08750.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330965651|gb|EGH65911.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|331014896|gb|EGH94952.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVATHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|237802284|ref|ZP_04590745.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331025141|gb|EGI05197.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 484
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 235 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 287 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVATHKQDIVDL 329
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 330 ATEIGTADFAR 340
>gi|123507556|ref|XP_001329441.1| thiamine biosynthesis protein ThiI [Trichomonas vaginalis G3]
gi|121912396|gb|EAY17218.1| thiamine biosynthesis protein ThiI, putative [Trichomonas vaginalis
G3]
Length = 423
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 28/196 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
++ + L SGG DS + + + R V+ + F YG E + +KI
Sbjct: 182 PVQSSGRVACLLSGGFDSPVAVWYMMRRGCAVQLVHFHSAPYG-----EWRSSVSKIRKI 236
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
V ++ +W I + +A+ D L T R + + A
Sbjct: 237 VSVLHQWGGP---------PKFYAIPIGEQQRQIAVDAPDK-LRITL--YR-RLMMRVAK 283
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ R + G + TI ++ T I + + + PL+ K E
Sbjct: 284 KICERQHCEALATGDSLGQVAS------QTINSM-TTIESVISPDMLIFRPLLGFNKEEI 336
Query: 181 WKLAQDIGGQDLVNLI 196
+ AQ IG D+ L
Sbjct: 337 MEKAQQIGTYDISILP 352
>gi|56476769|ref|YP_158358.1| hypothetical protein ebA2390 [Aromatoleum aromaticum EbN1]
gi|56312812|emb|CAI07457.1| hypothetical protein ebA2390 [Aromatoleum aromaticum EbN1]
Length = 457
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 142 GYPDCR--HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEE 199
GY D R + N + + P +W+ K ET + D+ G +
Sbjct: 250 GYEDYRNHPVFTALMARFFNALLGYKIQYRFPRLWMTKGETLREFVDVCGSEAR---WAT 306
Query: 200 SHTCYLGKRDKRYEWGY-GCNSCPACYLRQ-----KGWMEFKEKY 238
+ +C+ R C C AC LR+ G E + Y
Sbjct: 307 TRSCWQQSRQVAVSGERRQCGVCAACILRRLSVHAAGLNELPKTY 351
>gi|289550529|ref|YP_003471433.1| Thiamine biosynthesis protein thiI [Staphylococcus lugdunensis
HKU09-01]
gi|289180061|gb|ADC87306.1| Thiamine biosynthesis protein thiI [Staphylococcus lugdunensis
HKU09-01]
Length = 407
Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 70/193 (36%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMRRGVTIEAIHF-----HSPPFTSEK-AKEKVIELTRIMSQ 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A + + +G
Sbjct: 233 RVGPIKLHIVPFTNL-------QKQINKVVHPRYTMTST----RRMMM-RIADKVVHEIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + + V PL+ L K E K+A+ I
Sbjct: 281 AHAIVNGENLGQVAS---------QTLKSMYAINHVTSTPVLRPLLTLDKEEIVKMARKI 331
Query: 188 GGQDLVNLILEES 200
G D+ E+
Sbjct: 332 GTYDVSIQPFEDC 344
>gi|289672103|ref|ZP_06492993.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
syringae FF5]
Length = 352
Score = 51.8 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 51 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 102
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 103 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 154
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 155 VTG-----------------EAISQVASQTLPNLSLIDAATEKLVLRPLVATHKQDIVDL 197
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 198 ATEIGTADFAR 208
>gi|150016195|ref|YP_001308449.1| thiamine biosynthesis protein ThiI [Clostridium beijerinckii NCIMB
8052]
gi|149902660|gb|ABR33493.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
beijerinckii NCIMB 8052]
Length = 385
Score = 51.8 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 65/194 (33%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +L+ SGG DS R V + Y + E K + +++ +
Sbjct: 174 MNGSTMLMLSGGIDSPVAGYMMAKRGVEVSCV---YYHSHPYTSERAKDKVKDLAKILAQ 230
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I +I + + + ++ + A LA +
Sbjct: 231 YTEKINLYIVPFTDIQMEIINKCREDELTIIMRR-------------FMMRIACRLADKY 277
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI ++ G + + ++ I + PL+ + K + ++A+
Sbjct: 278 GINSVSTGESIGQVAS---------QTMDGLIVSDNCADRPAFRPLIAMDKTDIMEIARK 328
Query: 187 IGGQDLVNLILEES 200
IG + L E+
Sbjct: 329 IGTYETSILPYEDC 342
>gi|157147704|ref|YP_001455023.1| hypothetical protein CKO_03507 [Citrobacter koseri ATCC BAA-895]
gi|157084909|gb|ABV14587.1| hypothetical protein CKO_03507 [Citrobacter koseri ATCC BAA-895]
Length = 446
Score = 51.8 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 83/227 (36%), Gaps = 27/227 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK-----IVELMPK 66
+ LFSGG DS+ + L + +S Y + + +R+K +
Sbjct: 157 VSLFSGGLDSAIGVIDFLSSGRKPLLISHSYKGDKTKQDQIAHKIREKGTFSRLRSSANP 216
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ D + L ++ + + +I ++ + FVP N F+ A L +R
Sbjct: 217 IGRGMTRDITMRTRSLNFLAFALVGAYAVKQINNHKDLSIFVPE-NG-FISLNAPLTHRR 274
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+G T + I I+ N + V + P ++ K + +D
Sbjct: 275 ------VGSLSTRTTH-----PYFIGMIQELFN-NLGFGVRLINPYQFMTKGQMVSNCKD 322
Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+++ I++ + +C KR + C C C +R+ M+
Sbjct: 323 ---SKMLSEIVDLTVSCSHWKRKNQQ-----CGYCVPCMIRRAALMK 361
>gi|330899022|gb|EGH30441.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 317
Score = 51.8 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 41/191 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL + V I WK
Sbjct: 16 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGV-MEVAHFI------WKKYG 67
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L A+ +A RL I +
Sbjct: 68 SSQRVLFVSVPFEEVLGEILQKVDNSHMG------VVLKR--MMLRAASAVADRLEIDVL 119
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYETWKL 183
V G AI + + + + PL+ K + L
Sbjct: 120 VTG-----------------EAISQVASQTLPNLSLIDAATDKLVLRPLVATHKQDIVDL 162
Query: 184 AQDIGGQDLVN 194
A +IG D
Sbjct: 163 ATEIGTADFAR 173
>gi|320100773|ref|YP_004176365.1| thiamine biosynthesis/tRNA modification protein ThiI
[Desulfurococcus mucosus DSM 2162]
gi|319753125|gb|ADV64883.1| thiamine biosynthesis/tRNA modification protein ThiI
[Desulfurococcus mucosus DSM 2162]
Length = 484
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 63/183 (34%), Gaps = 31/183 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELMPKWK 68
AL+LFSGG DS R V+ L + G E+ V KK+ + +W
Sbjct: 174 RALVLFSGGFDSPVAAWLMAKRGLEVDFLHYMMG---SSEVSRQAFAVAKKLAD---EWL 227
Query: 69 DSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYR 125
S I + L + + + ++ V R + + A +A R
Sbjct: 228 SSYDPRFITIDFTPL-------------IAEIEGKIEWSYRQVVLR-ALMYMVAGRVAER 273
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG +V G S T+ + A + + PL+ K E ++
Sbjct: 274 LGYDALVTGEALGQASS------QTLANLRAAEYAASPGCIVLR-PLIGFDKEEIVGYSR 326
Query: 186 DIG 188
IG
Sbjct: 327 RIG 329
>gi|313623578|gb|EFR93753.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
innocua FSL J1-023]
Length = 403
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F Y E ++K ++L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-YSPPYTSE-----QAKQKAIDL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G+ HI+P + ++ + ++V M + + L
Sbjct: 227 AGKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRR------------MMLRITDE 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L + IV G + + +E+ + + + + P++ + K E
Sbjct: 275 LRRKRNGLAIVNGESLGQVAS---------QTLESMLAINAVTATPIIRPVVSMDKNEII 325
Query: 182 KLAQDIGGQDLVNLILEES 200
++AQ I +L E+
Sbjct: 326 QIAQKIDTYNLSVQPFEDC 344
>gi|319900168|ref|YP_004159896.1| argininosuccinate synthase [Bacteroides helcogenes P 36-108]
gi|319415199|gb|ADV42310.1| argininosuccinate synthase [Bacteroides helcogenes P 36-108]
Length = 402
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 14/130 (10%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K ++ FSGG D S T + A ++ V + G + +L+ K+
Sbjct: 4 KKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAKEY 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
D E + L + + + + IF A A
Sbjct: 64 VTIDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSER-----------IFQALAIARYAN 111
Query: 125 RLGITNIVIG 134
+G I G
Sbjct: 112 EIGADAIAHG 121
>gi|58337101|ref|YP_193686.1| thiamine biosynthesis protein ThiI [Lactobacillus acidophilus NCFM]
gi|227903673|ref|ZP_04021478.1| thiamine-phosphate kinase [Lactobacillus acidophilus ATCC 4796]
gi|75357802|sp|Q5FKW9|THII_LACAC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|58254418|gb|AAV42655.1| thiazole biosynthesis protein [Lactobacillus acidophilus NCFM]
gi|227868560|gb|EEJ75981.1| thiamine-phosphate kinase [Lactobacillus acidophilus ATCC 4796]
Length = 405
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 67/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS AL R +E + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASWLALKRGVDIEMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + P A + + L + M +Q L A
Sbjct: 227 TGILANYAGKINFIAV-PFAEIQETIKEKLPEGYLMTVQRR------------FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ G I G + + +E+ + + + V P+ + K E
Sbjct: 274 RIRAMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTTTPVIRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
A++IG DL E+
Sbjct: 325 IAKAEEIGTFDLSIQPFEDC 344
>gi|226313701|ref|YP_002773595.1| thiamine biosynthesis protein ThiI [Brevibacillus brevis NBRC
100599]
gi|254784220|sp|C0ZH32|THII_BREBN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|226096649|dbj|BAH45091.1| putative thiamine biosynthesis protein ThiI [Brevibacillus brevis
NBRC 100599]
Length = 399
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
LLL SGG DS L R +E + F + ++K + + KW
Sbjct: 179 KVLLLLSGGIDSPVAGWMMLKRGVTLEAIHF-----HSYPFTSERALQKVRDLAHKLTKW 233
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ H++P + ++ + I + + +A
Sbjct: 234 GGTV-RLHVVPFTEIQTAIREKCPEDYLITIMRR------------FMMRISERVAENTN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ G + +++ I I + + PL+ + K + +++ I
Sbjct: 281 AKALATGESLGQVAS---QTLESMDTINKVI------SIPILRPLVAMDKVDIVDISRQI 331
Query: 188 GGQDLVNLILEES 200
+L L E+
Sbjct: 332 DTYELSILPYEDC 344
>gi|329667574|gb|AEB93522.1| putative thiamine biosynthesis protein ThiI [Lactobacillus
johnsonii DPC 6026]
Length = 405
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R ++ + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVEIDMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + + + + + K+ + L + R L A
Sbjct: 227 TGILANYSGKI---------NFIAVPFTEIQEQIKEKLPEGYLMT--IQRR--FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ G I G + + +E+ + + + V P+ + K E
Sbjct: 274 RIRAMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+ IG DL E+
Sbjct: 325 IKLAEQIGTFDLSIEPFEDC 344
>gi|268319724|ref|YP_003293380.1| thiamine biosynthesis protein ThiI [Lactobacillus johnsonii FI9785]
gi|262398099|emb|CAX67113.1| thiamine biosynthesis protein ThiI [Lactobacillus johnsonii FI9785]
Length = 405
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R ++ + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVEIDMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + + + + + K+ + L + R L A
Sbjct: 227 TGILANYSGKI---------NFIAVPFTEIQEQIKEKLPEGYLMT--IQRR--FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ G I G + + +E+ + + + V P+ + K E
Sbjct: 274 RIRAMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+ IG DL E+
Sbjct: 325 IKLAEQIGTFDLSIEPFEDC 344
>gi|227889738|ref|ZP_04007543.1| thiamine-phosphate kinase [Lactobacillus johnsonii ATCC 33200]
gi|227849602|gb|EEJ59688.1| thiamine-phosphate kinase [Lactobacillus johnsonii ATCC 33200]
Length = 405
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R ++ + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVEIDMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + + + + + K+ + L + R L A
Sbjct: 227 TGILANYSGKI---------NFIAVPFTEIQEQIKEKLPEGYLMT--IQRR--FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ G I G + + +E+ + + + V P+ + K E
Sbjct: 274 RIRAMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+ IG DL E+
Sbjct: 325 IKLAEQIGTFDLSIEPFEDC 344
>gi|42518879|ref|NP_964809.1| thiamine biosynthesis protein ThiI [Lactobacillus johnsonii NCC
533]
gi|81667984|sp|Q74K02|THII_LACJO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|41583165|gb|AAS08775.1| probable thiamine biosynthesis protein ThiI [Lactobacillus
johnsonii NCC 533]
Length = 405
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R ++ + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASYLAMKRGVEIDMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + + + + + K+ + L + R L A
Sbjct: 227 TGILANYSGKI---------NFIAVPFTEIQEQIKEKLPEGYLMT--IQRR--FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ G I G + + +E+ + + + V P+ + K E
Sbjct: 274 RIRAMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+ IG DL E+
Sbjct: 325 IKLAEQIGTFDLSIEPFEDC 344
>gi|291280317|ref|YP_003497152.1| thiamine biosynthesis protein ThiI [Deferribacter desulfuricans
SSM1]
gi|290755019|dbj|BAI81396.1| thiamine biosynthesis protein ThiI [Deferribacter desulfuricans
SSM1]
Length = 389
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 59/182 (32%), Gaps = 24/182 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A + L SGG DS + R V L F + + KI L+
Sbjct: 175 SAGKVVSLLSGGIDSPVATWLMMKRGCEVIPLHF-----HTPPY-TGNKLTDKIERLVKT 228
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L + I +A+K ++ T + R L A +A L
Sbjct: 229 LSLYSVNGITLYMINFTQI-------QIAIKKYAHDKFTTILSRR--FMLKIANNIATNL 279
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I+ G D G + +E + S++ V PL+ K E LA+
Sbjct: 280 NALGIITG----DALG-----QVASQTLENLYCVNEASNLPVFRPLIGFDKQEIENLAKK 330
Query: 187 IG 188
IG
Sbjct: 331 IG 332
>gi|212224909|ref|YP_002308145.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
gi|212009866|gb|ACJ17248.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
Length = 276
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
D++KK A+L FSGG+DS+ L A + + +E + D+G + +E + + +
Sbjct: 47 DLMKKVDKAILAFSGGKDSTVALYLAKEVYKVPELEAVMIDHGLMAEEAIENAKRIAEHL 106
>gi|269127252|ref|YP_003300622.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermomonospora curvata DSM 43183]
gi|268312210|gb|ACY98584.1| thiamine biosynthesis/tRNA modification protein ThiI
[Thermomonospora curvata DSM 43183]
Length = 414
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 63/198 (31%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + AL+L SGG DS + R RV+ L F + + K +
Sbjct: 192 PVGMSGRALVLLSGGIDSPVAAYRMMRRGLRVDYLHFS-----GMPFTGPESIYKAYALV 246
Query: 64 MPKWKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ G ++P SS +A+ Q + L L
Sbjct: 247 RELDRFQGGSRLFVVPFGKAQQQIKSSGADRLAVVAQRR------------LMLRTGEIL 294
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A RLG ++ G S + + + + + PL+ + K E
Sbjct: 295 ARRLGGLALITGDSLGQVSS---------QTLANMTAVDDAVELPILRPLVGMDKVEIMD 345
Query: 183 LAQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 346 TARRIGTLTISELPDEDC 363
>gi|15834848|ref|NP_296607.1| MesJ/Ycf62 family protein [Chlamydia muridarum Nigg]
gi|270285014|ref|ZP_06194408.1| MesJ/Ycf62 family protein [Chlamydia muridarum Nigg]
gi|301336412|ref|ZP_07224614.1| tRNA(Ile)-lysidine synthase [Chlamydia muridarum MopnTet14]
gi|61216745|sp|Q9PL79|TILS_CHLMU RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|7190268|gb|AAF39100.1| MesJ/Ycf62 family protein [Chlamydia muridarum Nigg]
Length = 321
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 53/181 (29%), Gaps = 24/181 (13%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K LL SGG DS + R + DYG R E E
Sbjct: 17 SSLDKKKKYLLALSGGSDSLLLMYLLRSRGISFTAVHVDYGWRETSYQEACDLASLCERE 76
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV-FAAT 121
+P D + + + + +I+ + ++ +FL A
Sbjct: 77 QIPFILDRQEVANPMDFSDIENIARQYRYELFYRLCKERLFA--------GVFLGHHADD 128
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + + + G + G G +T+ PL+ + K +
Sbjct: 129 QAETI-LKRVFEGAHLGNLKG--------------MARYGTYKGITLLRPLLHITKRQIV 173
Query: 182 K 182
+
Sbjct: 174 E 174
>gi|227892656|ref|ZP_04010461.1| thiamine-phosphate kinase [Lactobacillus ultunensis DSM 16047]
gi|227865527|gb|EEJ72948.1| thiamine-phosphate kinase [Lactobacillus ultunensis DSM 16047]
Length = 405
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS AL R +E + F Y E L K++
Sbjct: 173 PVGTAGKAVMMLSGGIDSPVASWLALKRGVDIEMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + P A + + L + M +Q L A
Sbjct: 227 TGILANYAGKINFIAV-PFAEIQETIKEKLPEGYLMTVQRR------------FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ G I G + + +++ + + + V P+ + K E
Sbjct: 274 RIRKMRGGLAIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
A+ IG DL E+
Sbjct: 325 IAKAEKIGTFDLSIKPFEDC 344
>gi|327439220|dbj|BAK15585.1| thiamine biosynthesis ATP pyrophosphatase [Solibacillus silvestris
StLB046]
Length = 403
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 71/197 (36%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I +LL+ SGG DS + R R++ + F + L K++
Sbjct: 175 PIGSNGRSLLMLSGGIDSPVAGYLMMKRGVRLDAIHFFSPPYTS---DNALQKVKELANE 231
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ ++ H++P L ++ N++M + + A +
Sbjct: 232 LTKFGANI-RLHVIPFTELQVAVKDAVPDNMSMTSTRR------------MMMKVADKVR 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+G IV G + + +E+ + ++ + PL+ K + K+
Sbjct: 279 EEVGALGIVTGESLGQVAS---------QTLESLTAINDVTNTPILRPLISADKNDIIKI 329
Query: 184 AQDIGGQDLVNLILEES 200
A+DIG + E+
Sbjct: 330 AKDIGTYETSIQPFEDC 346
>gi|57640303|ref|YP_182781.1| thiamine biosynthesis protein ThiI [Thermococcus kodakarensis KOD1]
gi|84028851|sp|Q5JCY1|THII_PYRKO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|57158627|dbj|BAD84557.1| Thiamine biosynthesis protein ThiI [Thermococcus kodakarensis KOD1]
Length = 381
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 66/190 (34%), Gaps = 24/190 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SGG DS + R V + G E L +KI + K+
Sbjct: 182 KVVALLSGGIDSPVAAFLMMKRGVEVIPVHIYMG-------EKTLEKVRKIWNQLKKYHY 234
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ I+ + + + + T V + + + A +A G
Sbjct: 235 GGKAELIVVKPQNRE-------EMLKKIKELGKEKYTCVLCK-FMMVKHADRIAKEFGAK 286
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV+G D G + +E + S + ++ PL+ L K E +A+ IG
Sbjct: 287 GIVMG----DSLG-----QVASQTLENMYIVSQASDLPIYRPLIGLDKEEIVDIAKKIGT 337
Query: 190 QDLVNLILEE 199
+L L +E
Sbjct: 338 FELSTLPEDE 347
>gi|139439594|ref|ZP_01773007.1| Hypothetical protein COLAER_02034 [Collinsella aerofaciens ATCC
25986]
gi|133774935|gb|EBA38755.1| Hypothetical protein COLAER_02034 [Collinsella aerofaciens ATCC
25986]
Length = 414
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 27/190 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A + L S G DS R + F R + V+ I L
Sbjct: 172 PVGSAGKVVTLLSSGIDSPVATWMLARRGAVCVPVHFS--GRPQTPDTSEYLVQDIIRAL 229
Query: 64 MPKWKDSLGEDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
P +G +++P +IS + + + + I A +
Sbjct: 230 EP--GVQIGRLYVVPFGDCQREISVTCPSNLRVIMYRR-------------IMYSVAERI 274
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A+ G IV G + + +E + + + V PL+ K E
Sbjct: 275 AHIEGAKAIVTGESLGQVAS---------QTLENIMAVNEAVKIPVFRPLIGSDKQEIIA 325
Query: 183 LAQDIGGQDL 192
A++IG D+
Sbjct: 326 RAEEIGTFDI 335
>gi|329921116|ref|ZP_08277639.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners SPIN 1401G]
gi|328935023|gb|EGG31512.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners SPIN 1401G]
Length = 405
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R ++ + F K EL
Sbjct: 173 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVNIDMVHFF------SPPYTTDKALAKAEEL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G+ + + + + + + + K+ + L V R L A +
Sbjct: 227 TGILANYCGKINFIAVPF------TEIQEQIKEKLPEGYLMT--VQRR--FMLQLADKIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G I G + + +E+ + + ++ V P+ + K E L
Sbjct: 277 EMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIAL 327
Query: 184 AQDIGGQDLVNLILEES 200
A IG +L E+
Sbjct: 328 ADKIGTFELSIQPFEDC 344
>gi|73668265|ref|YP_304280.1| hypothetical protein Mbar_A0722 [Methanosarcina barkeri str.
Fusaro]
gi|72395427|gb|AAZ69700.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 272
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 36/188 (19%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ IK SA++ FSGG DS+T + A + ++ ++ + L +K++
Sbjct: 11 EAIKARESAVIAFSGGVDSATLAALAFEVLGEKALAVTIN----------SPLFPKKQLE 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + E IL + L S+ T N + L
Sbjct: 61 TAVETACEIGIEHKILSFSQLSLPYFSANTLNRCYFCKKA-------------LLETLLD 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYE 179
A + G ++ G ++ G + R RA++ A +++P + + K E
Sbjct: 108 FAEKAGYNAVLEGTNSSEIHG--ENRPGY-RAVQEA-------GEKIYSPFVEFNVTKDE 157
Query: 180 TWKLAQDI 187
++A +
Sbjct: 158 IREVASKL 165
>gi|229587910|ref|YP_002870029.1| thiamine biosynthesis protein ThiI [Pseudomonas fluorescens SBW25]
gi|259518583|sp|C3K7D0|THII_PSEFS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|229359776|emb|CAY46626.1| thiamine biosynthesis protein [Pseudomonas fluorescens SBW25]
Length = 484
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 67/186 (36%), Gaps = 35/186 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R F+ G R EL E + KK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAH-ELGVMEVAHFIWKKYGSSQRVLF 241
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S+ + +L ILG + +S + V R + L A+ +A +L I
Sbjct: 242 VSVPFEEVL-GEILGKVDNSHMG---------------VVLKR--MMLRAASRIADQLQI 283
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P ++ + + + PL+ K + LA++
Sbjct: 284 DALVTGEAISQVSSQTLP----------NLSLIDCVTEKLVLR-PLIASHKQDIIDLAEE 332
Query: 187 IGGQDL 192
IG D
Sbjct: 333 IGTADF 338
>gi|212638321|ref|YP_002314841.1| thiamine biosynthesis protein ThiI [Anoxybacillus flavithermus WK1]
gi|226703938|sp|B7GGQ4|THII_ANOFW RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|212559801|gb|ACJ32856.1| Thiamine biosynthesis ATP pyrophosphatase [Anoxybacillus
flavithermus WK1]
Length = 397
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS A+ R ++E + F ++K+++L + +
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGLQIEAVHFF------SPPFTSERAKQKVIDLAQRLTE 232
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G HI+P L + + +N ++ L + +
Sbjct: 233 FGGTIRLHIVPFTELQQAIYKQVPENYSLIAMRRA------------MLRITDEIRKKEN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +E+ + + + + PL+ + K E +A+ I
Sbjct: 281 GLAIVTGESLGQVAS---------QTLESMVVVNDVTTTPILRPLVSMDKTEIIAIAERI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTHHISIRPYEDC 344
>gi|315653726|ref|ZP_07906646.1| thiamine biosynthesis protein ThiI [Lactobacillus iners ATCC 55195]
gi|315489088|gb|EFU78730.1| thiamine biosynthesis protein ThiI [Lactobacillus iners ATCC 55195]
Length = 405
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +++ + F K EL
Sbjct: 173 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEEL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G+ + + + + + + + K+ + L V R L A +
Sbjct: 227 TGILANYCGKINFIAVPF------TEIQEQIKEKLPEGYLMT--VQRR--FMLQLADKIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G I G + + +E+ + + ++ V P+ + K E L
Sbjct: 277 EMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIAL 327
Query: 184 AQDIGGQDLVNLILEES 200
A IG +L E+
Sbjct: 328 ADKIGTFELSIQPFEDC 344
>gi|312871974|ref|ZP_07732056.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LEAF 2062A-h1]
gi|311092551|gb|EFQ50913.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LEAF 2062A-h1]
Length = 405
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +++ + F K EL
Sbjct: 173 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEEL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G+ + + + + + + + K+ + L V R L A +
Sbjct: 227 TGILANYCGKINFIAVPF------TEIQEQIKEKLPEGYLMT--VQRR--FMLQLADKIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G I G + + +E+ + + ++ V P+ + K E L
Sbjct: 277 EMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIAL 327
Query: 184 AQDIGGQDLVNLILEES 200
A IG +L E+
Sbjct: 328 ADKIGTFELSIQPFEDC 344
>gi|309807742|ref|ZP_07701676.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LactinV 01V1-a]
gi|308169002|gb|EFO71086.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LactinV 01V1-a]
Length = 350
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +++ + F K EL
Sbjct: 118 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEEL 171
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G+ + + + + + + + K+ + L V R L A +
Sbjct: 172 TGILANYCGKINFIAVPF------TEIQEQIKEKLPEGYLMT--VQRR--FMLQLADKIR 221
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G I G + + +E+ + + ++ V P+ + K E L
Sbjct: 222 EMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIAL 272
Query: 184 AQDIGGQDLVNLILEES 200
A IG +L E+
Sbjct: 273 ADKIGTFELSIQPFEDC 289
>gi|309804814|ref|ZP_07698878.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LactinV 09V1-c]
gi|309806271|ref|ZP_07700284.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LactinV 03V1-b]
gi|309809947|ref|ZP_07703795.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners SPIN 2503V10-D]
gi|312871623|ref|ZP_07731715.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LEAF 3008A-a]
gi|312873233|ref|ZP_07733289.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LEAF 2052A-d]
gi|312874660|ref|ZP_07734684.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LEAF 2053A-b]
gi|325911698|ref|ZP_08174105.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners UPII 143-D]
gi|308165924|gb|EFO68143.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LactinV 09V1-c]
gi|308167255|gb|EFO69421.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LactinV 03V1-b]
gi|308169735|gb|EFO71780.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners SPIN 2503V10-D]
gi|311089890|gb|EFQ48310.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LEAF 2053A-b]
gi|311091244|gb|EFQ49632.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LEAF 2052A-d]
gi|311092848|gb|EFQ51200.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LEAF 3008A-a]
gi|325476464|gb|EGC79623.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners UPII 143-D]
Length = 405
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +++ + F K EL
Sbjct: 173 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEEL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G+ + + + + + + + K+ + L V R L A +
Sbjct: 227 TGILANYCGKINFIAVPF------TEIQEQIKEKLPEGYLMT--VQRR--FMLQLADKIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G I G + + +E+ + + ++ V P+ + K E L
Sbjct: 277 EMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIAL 327
Query: 184 AQDIGGQDLVNLILEES 200
A IG +L E+
Sbjct: 328 ADKIGTFELSIQPFEDC 344
>gi|302191129|ref|ZP_07267383.1| thiamine biosynthesis protein ThiI [Lactobacillus iners AB-1]
gi|309803201|ref|ZP_07697298.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LactinV 11V1-d]
gi|308164709|gb|EFO66959.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners LactinV 11V1-d]
Length = 405
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +++ + F K EL
Sbjct: 173 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEEL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G+ + + + + + + + K+ + L V R L A +
Sbjct: 227 TGILANYCGKINFIAVPF------TEIQEQIKEKLPEGYLMT--VQRR--FMLQLADKIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G I G + + +E+ + + ++ V P+ + K E L
Sbjct: 277 EMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIAL 327
Query: 184 AQDIGGQDLVNLILEES 200
A IG +L E+
Sbjct: 328 ADKIGTFELSIQPFEDC 344
>gi|259501663|ref|ZP_05744565.1| thiamine biosynthesis protein ThiI [Lactobacillus iners DSM 13335]
gi|259166948|gb|EEW51443.1| thiamine biosynthesis protein ThiI [Lactobacillus iners DSM 13335]
Length = 399
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +++ + F K EL
Sbjct: 167 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEEL 220
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G+ + + + + + + + K+ + L V R L A +
Sbjct: 221 TGILANYCGKINFIAVPF------TEIQEQIKEKLPEGYLMT--VQRR--FMLQLADKIR 270
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G I G + + +E+ + + ++ V P+ + K E L
Sbjct: 271 EMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIAL 321
Query: 184 AQDIGGQDLVNLILEES 200
A IG +L E+
Sbjct: 322 ADKIGTFELSIQPFEDC 338
>gi|168214426|ref|ZP_02640051.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens CPE str. F4969]
gi|170714092|gb|EDT26274.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens CPE str. F4969]
Length = 385
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +++ SGG DS R + Y + E K++ +++ +
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCV---YYHSHPYTSERAKDKVKELAKIVGR 229
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I DI + + ++ + A LA R
Sbjct: 230 YTEKITLYVVPFTEIQMDIIEKCREDELTIIMRR-------------FMMRVACELAERK 276
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +I G + + +E I S V PL+ + K + +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLIVSNDVSDRPVFRPLIAMDKEDIMDIARD 327
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 328 IDTYETSILPYEDC 341
>gi|300361438|ref|ZP_07057615.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
gasseri JV-V03]
gi|300354057|gb|EFJ69928.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
gasseri JV-V03]
Length = 405
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+++ SGG DS A+ R ++ + F Y E L K++
Sbjct: 173 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVEIDMVHFFSPPY------TTEKALAKAKEL 226
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
++ + + + + + + + K+ + L + R L A
Sbjct: 227 TGILANYSGKI---------NFIAVPFTEIQEQIKEKLPEGYLMT--IQRR--FMLQLAD 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ G I G + + +E+ + + + V P+ + K E
Sbjct: 274 HIRAMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEI 324
Query: 181 WKLAQDIGGQDLVNLILEES 200
KLA+ IG DL E+
Sbjct: 325 IKLAEQIGTFDLSIEPFEDC 344
>gi|212224155|ref|YP_002307391.1| hypothetical protein TON_1006 [Thermococcus onnurineus NA1]
gi|212009112|gb|ACJ16494.1| ThiI-related protein [Thermococcus onnurineus NA1]
Length = 196
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 25/183 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L S G DS + L + + + F Q +K E + ++ E++ K+
Sbjct: 2 KAVALLSSGIDSPVAIYLMLRKGMEITPVHFK--QSDKKESKV-----LELCEILSKY-G 53
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L E I+ S L + K T L A + + +G
Sbjct: 54 KLNEPVIVDAYEEQAPVFSKLVEIGKAKWTCLFCKYT--------MLRKACRVGHEIGAK 105
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G D G + ++ + + S + + PL+ K E K+A++IG
Sbjct: 106 AIVTG----DSLG-----QVASQTLDNLLIISQASDLPILRPLIGRDKEEIVKIAKEIGT 156
Query: 190 QDL 192
++
Sbjct: 157 FEI 159
>gi|323488438|ref|ZP_08093685.1| thiamine biosynthesis protein [Planococcus donghaensis MPA1U2]
gi|323397945|gb|EGA90744.1| thiamine biosynthesis protein [Planococcus donghaensis MPA1U2]
Length = 400
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
ALL+ SGG DS L R R++ + F + + E + ++
Sbjct: 180 KALLMLSGGLDSPVAGYHMLKRGVRLDLIHFFSPPFTN---DRAKEKVFDLAERLSQFGS 236
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
S+ + H++P L H + N+ + +T R ++ V LA
Sbjct: 237 SV-KLHVIPFTKLQQEVHKQVPDNI-------TMTST----RRMMMRVADLVLAET-NCR 283
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G + + +E+ + ++ V PL+ + K E +AQ I
Sbjct: 284 AIVTGESLGQVAS---------QTLESMQAINAVTNTPVLRPLIAMDKLEIIDIAQQIET 334
Query: 190 QDLVNLILEES 200
D+ E+
Sbjct: 335 YDISIRPFEDC 345
>gi|313681611|ref|YP_004059349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfuricurvum kujiense DSM 16994]
gi|313154471|gb|ADR33149.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfuricurvum kujiense DSM 16994]
Length = 339
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 22/134 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELM 64
L+ SGG DS+ ++ VE + Y + + E ++ +
Sbjct: 1 MGKKVLIGMSGGVDSTVSTLLLKEQGYDVEGV---YMKLHSKPGYHEIHQARAQRAADFA 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ HIL L + ++ + ++ PN P RNI F
Sbjct: 58 G------VKLHILDL---QEEFNAKVFTPFIETYKEGKTPN---PCALCNRNIKFGAM-V 104
Query: 121 TLAYRLGITNIVIG 134
A +G + G
Sbjct: 105 AYADSIGADYVATG 118
>gi|304314038|ref|YP_003849185.1| thiamine biosynthesis protein [Methanothermobacter marburgensis
str. Marburg]
gi|302587497|gb|ADL57872.1| predicted thiamine biosynthesis protein [Methanothermobacter
marburgensis str. Marburg]
Length = 380
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 59/188 (31%), Gaps = 25/188 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE-LECRLCVRKKIVELMPKWK 68
+ L SGG DS + R +V + D E L+ + K+ E +
Sbjct: 170 KVVALLSGGIDSPVATYLLMKRGCQVVAVHTDNSPFTAPESLDKVEKIASKLEEYSAGVE 229
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L I + +N+ + + R A +A G
Sbjct: 230 FKL---RIFRYGSYLEKCRREAPENMTCVLCKAGM------YR------LAEMVAEEEGA 274
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IV G + + + + M + V +PL+ + K E LA+ IG
Sbjct: 275 LAIVDGSSLGQVAS---------QTLPNILATRMAVRMPVLSPLIGMDKVEIEALAKRIG 325
Query: 189 GQDLVNLI 196
D+ +
Sbjct: 326 TYDISVIP 333
>gi|168206318|ref|ZP_02632323.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens E str. JGS1987]
gi|170662185|gb|EDT14868.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens E str. JGS1987]
Length = 385
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +++ SGG DS R + Y + E K++ +++ +
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCV---YYHSHPYTSERAKDKVKELAKIVGR 229
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I DI + + ++ + A LA R
Sbjct: 230 YTEKITLYVVPFTEIQMDIIEKCREDELTIIMRR-------------FMMRVACELAERK 276
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +I G + + +E + S V PL+ + K + +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLMVSNDVSDRPVFRPLIAMDKEDIMDIARD 327
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 328 IDTYETSILPYEDC 341
>gi|146309153|ref|YP_001189618.1| thiamine biosynthesis protein ThiI [Pseudomonas mendocina ymp]
gi|189030640|sp|A4XZX0|THII_PSEMY RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|145577354|gb|ABP86886.1| [ThiS-adenylate] sulfurtransferase [Pseudomonas mendocina ymp]
Length = 484
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 31/184 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R F+ G R EL E + +K
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLVSHFCFFNLGGRAH-ELGVMEVAHYIWQKFGRSQRVLF 241
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S+ + ++ G+I + + ++ + L A +A RL I
Sbjct: 242 ISVPFEEVV-----GEILGKVDNSQMGVILKR-------------MMLRAATRVAERLEI 283
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+V G + S + + + + + V PL+ K + A IG
Sbjct: 284 EALVTGEAISQVSS---------QTLTNLAVIDSATDMLVMRPLIASHKQDIIDTATQIG 334
Query: 189 GQDL 192
+
Sbjct: 335 TAEF 338
>gi|251793880|ref|YP_003008612.1| hypothetical protein NT05HA_2217 [Aggregatibacter aphrophilus
NJ8700]
gi|247535279|gb|ACS98525.1| conserved hypothetical protein [Aggregatibacter aphrophilus NJ8700]
Length = 438
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 82/240 (34%), Gaps = 48/240 (20%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ + LFSGG DS+ L++ +S Y + ++ I++ + +
Sbjct: 145 RNKDCVCLFSGGLDSAIGTIDLLEQGHSPVLVSHSY--------KGDKSRQQAIIQQLNQ 196
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+I + I+ L + +I R++ FL FA AY L
Sbjct: 197 NG------YINQFSQFNAIAQPHLNNGKSTEITMRT--------RSLNFLAFAIVSAYAL 242
Query: 127 GI---TNIVI-----GVCETDYS------GYPDCR---HDTIRAIETAINLGMESHVTVH 169
I I GV + G R I+ I+ + + T+
Sbjct: 243 QKVAQKKIDILVPENGVISINAPLTVRRVGTLSTRTTHPYFIQEIQK-LFTAVNIPFTLR 301
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
P + K + +++ L+ I+ ++ +C KR + C C C +R+
Sbjct: 302 NPYQFKTKGQMIAECRNL---PLLQQIIPDTVSCSHWKRKNQQ-----CGVCVPCLIRRA 353
>gi|269119357|ref|YP_003307534.1| thiamine biosynthesis/tRNA modification protein ThiI [Sebaldella
termitidis ATCC 33386]
gi|268613235|gb|ACZ07603.1| thiamine biosynthesis/tRNA modification protein ThiI [Sebaldella
termitidis ATCC 33386]
Length = 388
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 44/203 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L SGG DS R V ++F + + +K+ EL
Sbjct: 177 KGLVLLSGGIDSPVAAFMMAKRGMFVNAVTF-----HSFPFTSTQAL-EKVKELTEILSL 230
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + + + IL + + N T + R + + A LA G
Sbjct: 231 YIPKTRLFSMNILK--------IQQEINQKTNKELATILTRR--VMMRLAEKLAKSRGYG 280
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINL---------GMESHVTVHTPLMWLKKYET 180
++ G ++ + + V PL+ + K E
Sbjct: 281 ALITG-----------------ESLGQVASQTIGGLTCTNASVKDIPVFRPLIGMDKTEI 323
Query: 181 WKLAQDIGGQDLVNLILEESHTC 203
+A +I + E+ +C
Sbjct: 324 MDIAAEIDTYEKSIEPYED--SC 344
>gi|325913007|ref|ZP_08175380.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners UPII 60-B]
gi|325477687|gb|EGC80826.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
iners UPII 60-B]
Length = 405
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+++ SGG DS A+ R +++ + F K EL
Sbjct: 173 PVGTAGRAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEEL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G+ + + + + + + + K+ + L V R L A +
Sbjct: 227 TGILANYCGKINFIAVPF------TEIQEQIKEKLPEGYLMT--VQRR--FMLQLADKIR 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G I G + + +E+ + + + V P+ + K E L
Sbjct: 277 EMRGGLAIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEIIAL 327
Query: 184 AQDIGGQDLVNLILEES 200
A IG +L E+
Sbjct: 328 ADKIGTFELSIQPFEDC 344
>gi|330505378|ref|YP_004382247.1| thiamine biosynthesis protein ThiI [Pseudomonas mendocina NK-01]
gi|328919664|gb|AEB60495.1| thiamine biosynthesis protein ThiI [Pseudomonas mendocina NK-01]
Length = 484
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 61/184 (33%), Gaps = 31/184 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R F+ G R EL E + +K
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLVSHFCFFNLGGRAH-ELGVMEVAHYIWQKFGRSQRVLF 241
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S+ + ++ G+I + + ++ + L A +A +L I
Sbjct: 242 ISVPFEEVV-----GEILGKVDNSQMGVILKR-------------MMLRAATRVAEKLQI 283
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+V G + S + + + + + V PL+ K + A IG
Sbjct: 284 EALVTGEAISQVSS---------QTLTNLAVIDSATDMLVMRPLIASHKQDIIDTATQIG 334
Query: 189 GQDL 192
+
Sbjct: 335 TAEF 338
>gi|329727866|gb|EGG64316.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus epidermidis VCU144]
Length = 407
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R VE + F + + K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMKRGVTVEAIHF-----HSPPFTSEK-AKDKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + H++P + + + + +T R ++ + + +++
Sbjct: 233 RVGPIKLHLVPFTEI-------QKQINKVVHPRYTMTST----RRMMM-RISDKVVHQIN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + T++++ AIN + V PL+ L K + K A+++
Sbjct: 281 ANAIVNGENLGQVAS------QTLKSM-YAINHVTATP--VLRPLLTLDKEDIIKKAKEL 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPYEDC 344
>gi|319401028|gb|EFV89247.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus epidermidis FRI909]
Length = 407
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R VE + F + + K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMKRGVTVEAIHF-----HSPPFTSEK-AKDKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + H++P + + + + +T R ++ + + +++
Sbjct: 233 RVGPIKLHLVPFTEI-------QKQINKVVHPRYTMTST----RRMMM-RISDKVVHQIN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + T++++ AIN + V PL+ L K + K A+++
Sbjct: 281 ANAIVNGENLGQVAS------QTLKSM-YAINHVTATP--VLRPLLTLDKEDIIKKAKEL 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPYEDC 344
>gi|242242979|ref|ZP_04797424.1| thiamine biosynthesis protein [Staphylococcus epidermidis W23144]
gi|242233580|gb|EES35892.1| thiamine biosynthesis protein [Staphylococcus epidermidis W23144]
Length = 407
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R VE + F + + K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMKRGVTVEAIHF-----HSPPFTSEK-AKDKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + H++P + + + + +T R ++ + + +++
Sbjct: 233 RVGPIKLHLVPFTEI-------QKQINKVVHPRYTMTST----RRMMM-RISDKVVHQIN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + T++++ AIN + V PL+ L K + K A+++
Sbjct: 281 ANAIVNGENLGQVAS------QTLKSM-YAINHVTATP--VLRPLLTLDKEDIIKKAKEL 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPYEDC 344
>gi|27468309|ref|NP_764946.1| putative thiamine biosynthesis protein [Staphylococcus epidermidis
ATCC 12228]
gi|57867227|ref|YP_188851.1| thiamine biosynthesis protein ThiI [Staphylococcus epidermidis
RP62A]
gi|251811105|ref|ZP_04825578.1| thiamine biosynthesis protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875863|ref|ZP_06284730.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus epidermidis SK135]
gi|293366338|ref|ZP_06613018.1| thiamine biosynthesis protein ThiI [Staphylococcus epidermidis
M23864:W2(grey)]
gi|33301723|sp|Q8CNW7|THII_STAES RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|71153654|sp|Q5HNJ0|THII_STAEQ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|27315855|gb|AAO04990.1|AE016748_224 putative thiamine biosynthesis protein [Staphylococcus epidermidis
ATCC 12228]
gi|57637885|gb|AAW54673.1| thiamine biosynthesis protein ThiI [Staphylococcus epidermidis
RP62A]
gi|251805325|gb|EES57982.1| thiamine biosynthesis protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294888|gb|EFA87415.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus epidermidis SK135]
gi|291319576|gb|EFE59942.1| thiamine biosynthesis protein ThiI [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329737383|gb|EGG73637.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus epidermidis VCU028]
gi|329737487|gb|EGG73740.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus epidermidis VCU045]
Length = 407
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R VE + F + + K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMKRGVTVEAIHF-----HSPPFTSEK-AKDKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + H++P + + + + +T R ++ + + +++
Sbjct: 233 RVGPIKLHLVPFTEI-------QKQINKVVHPRYTMTST----RRMMM-RISDKVVHQIN 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + T++++ AIN + V PL+ L K + K A+++
Sbjct: 281 ANAIVNGENLGQVAS------QTLKSM-YAINHVTATP--VLRPLLTLDKEDIIKKAKEL 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPYEDC 344
>gi|319406809|emb|CBI80442.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella sp. 1-1C]
Length = 409
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 35/129 (27%), Gaps = 4/129 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
K ++ SGG DSS V ++ Y C + I +
Sbjct: 13 KNSRVVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGAATHRVGACCAGQDIEDARR 72
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +IL + ++ A P V + T AY
Sbjct: 73 VAETLGVPHYILD---YEERFREAVINPFAESYAHGETPIPCVSCNQTVKFSDLLTTAYE 129
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 130 LGADALATG 138
>gi|10957550|ref|NP_051680.1| hypothetical protein DR_C0007 [Deinococcus radiodurans R1]
gi|6460979|gb|AAF12682.1|AE001827_20 hypothetical protein DR_C0007 [Deinococcus radiodurans R1]
Length = 423
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 70/246 (28%), Gaps = 56/246 (22%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ L SGG DS + + +S +L +++ +
Sbjct: 137 EDCVALLSGGLDSLVGMIDLVAEGHNPLAVS---------QLVAGDAAKQREIATDLGRT 187
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA----- 123
L +H G+ S S R +IFL +A A
Sbjct: 188 THLQLNHAAECPTPGEDSQRS---------------------RTLIFLAYAVLAATATTR 226
Query: 124 -YRLGITNIVI---GVCETDYSGYP------DCR---HDTIRAIETAINLGMESHVTVHT 170
+ I I G + P R ++ ++ + + +V +
Sbjct: 227 FQQARAVPIYINENGFIALNPPLTPMRIGSLSTRTAHPVFLQQLQAVLQ-AVGLNVALIN 285
Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
P K E + Q +++ + +C R C C C +R+
Sbjct: 286 PYALKTKGEMLT---ECANQTVLSRWASATTSC----GRYRRFGYKHCGRCIPCQVRRAA 338
Query: 231 WMEFKE 236
++ + +
Sbjct: 339 FLAWGQ 344
>gi|196249957|ref|ZP_03148652.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. G11MC16]
gi|196210471|gb|EDY05235.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
sp. G11MC16]
Length = 403
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS A+ R +E + F ++K+++L+ K
Sbjct: 181 KAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKLTA 234
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G+ HI+P + ++ + V + +L +T R L L R
Sbjct: 235 YGGKIKLHIVPFTEVQQ----AIYQGVPNEY---SLIST----RRA-MLKITDALRRRQR 282
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +E+ + ++ V PL+ + K E ++A+ I
Sbjct: 283 GLAIVTGESLGQVAS---------QTLESMYVINEVTNTPVLRPLISMDKMEIIEIAKQI 333
Query: 188 GGQDLVNLILEES 200
D+ L E+
Sbjct: 334 DTHDISILPYEDC 346
>gi|138896335|ref|YP_001126788.1| thiamine biosynthesis protein ThiI [Geobacillus thermodenitrificans
NG80-2]
gi|189030630|sp|A4IRT9|THII_GEOTN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|134267848|gb|ABO68043.1| Thiamine biosynthesis protein ThiI [Geobacillus thermodenitrificans
NG80-2]
Length = 401
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS A+ R +E + F ++K+++L+ K
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKLTA 232
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G+ HI+P + ++ + V + +L +T R L L R
Sbjct: 233 YGGKIKLHIVPFTEVQQ----AIYQGVPNEY---SLIST----RRA-MLKITDALRRRQR 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +E+ + ++ V PL+ + K E ++A+ I
Sbjct: 281 GLAIVTGESLGQVAS---------QTLESMYVINEVTNTPVLRPLISMDKMEIIEIAKQI 331
Query: 188 GGQDLVNLILEES 200
D+ L E+
Sbjct: 332 DTHDISILPYEDC 344
>gi|315924578|ref|ZP_07920797.1| thiamine biosynthesis protein ThiI [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622108|gb|EFV02070.1| thiamine biosynthesis protein ThiI [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 395
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R R + F + ++K+++L
Sbjct: 185 KAALLLSGGIDSPVAGYMMAKRGIRPIAVYF-----HSFPFTS-DRAKEKVIDLAKILTQ 238
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G +++ TK V + + T + R + A +A + G
Sbjct: 239 YTGR-----MSLYVVPFTDIQTKIVEVCPERQ---TTLIIRR--FMMRIAEKIAEQNGAL 288
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+++ G + + E G + V PL+ + K E ++AQDIG
Sbjct: 289 SLITGESLGQVAS---------QTQEGLAATGDVVAMPVLRPLIGMDKQEIVEIAQDIGT 339
Query: 190 QDLVNLILEES 200
+ L E+
Sbjct: 340 FETSILPYEDC 350
>gi|317132595|ref|YP_004091909.1| thiamine biosynthesis/tRNA modification protein ThiI
[Ethanoligenens harbinense YUAN-3]
gi|315470574|gb|ADU27178.1| thiamine biosynthesis/tRNA modification protein ThiI
[Ethanoligenens harbinense YUAN-3]
Length = 391
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A +L SGG DS R V + F + K+++L+
Sbjct: 180 RAAVLISGGIDSPVAAYMMARRGMSVCAVHF------ASPPYTSPRAKAKVLDLLKIVSA 233
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G + ++L + + ++ T + R + AA +A
Sbjct: 234 YSGPIACFVVPF------TALQEQIRAHCKEEFF--TILLRR--FMMRAAARIAEGQDCA 283
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + TI AI + V PL+ + K E ++A+ I
Sbjct: 284 ALITGESIGQVAS------QTIEAITCTQAAST---LPVLRPLIGMDKEEIIRVARRIDT 334
Query: 190 QDLVNLILEES 200
+ L +
Sbjct: 335 FETSILPYADC 345
>gi|253583302|ref|ZP_04860500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium varium ATCC 27725]
gi|251833874|gb|EES62437.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium varium ATCC 27725]
Length = 346
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 12/80 (15%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELM 64
++ SGG DSS V ++ + +K E L+ + ++I +
Sbjct: 2 SRKKVVIGMSGGVDSSVAAYLLKSEGYGVIGVTLN----HKKEESLKDEIKAAQRICHFL 57
Query: 65 PKWKDSLGEDHILPLAILGD 84
E I+ + L
Sbjct: 58 GI------EHKIIDIEELFQ 71
>gi|145344203|ref|XP_001416626.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576852|gb|ABO94919.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 714
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
M D + + +++ + SGG DS + V TL DY R + E
Sbjct: 245 MRDRMSEFGNSIAVSLSGGVDSMVLAYILKHQGYDVVTLHIDYKNRPESTEEA 297
>gi|188583764|ref|YP_001927209.1| tRNA-specific 2-thiouridylase MnmA [Methylobacterium populi BJ001]
gi|179347262|gb|ACB82674.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium populi BJ001]
Length = 395
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 61/197 (30%), Gaps = 32/197 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y + C + I + +
Sbjct: 24 RVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACCAGRDIHDARAVAE 83
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D S+ A P N V R+++ +
Sbjct: 84 TLGIPHYVLD---YEDRFRESVIDRFAESYLSGETPIPCVECNRSVKFRDLL------GM 134
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------P 171
A LG + G + + + RA+ A++ + ++ P
Sbjct: 135 ARDLGAEALATGHYVASRA-----QPEGGRALYRALDPARDQSYFLYATTPEQLAFLRFP 189
Query: 172 LMWLKKYETWKLAQDIG 188
L K ET LA+++G
Sbjct: 190 LGERPKDETRALARELG 206
>gi|312876842|ref|ZP_07736819.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor lactoaceticus 6A]
gi|311796357|gb|EFR12709.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor lactoaceticus 6A]
Length = 392
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 66/192 (34%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
A LL SGG DS R +E + F + E + + K + + K K
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHFYSFPYTGVKAKEKVIDLCKVLAKYTDKIK 240
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + L+ I + + + + ++ + A +A + G
Sbjct: 241 LYIVPFTEIQLS----IYENCDERFLTIIMRR-------------FMMKIAQKIAMQNGG 283
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
++ G + + +E+ + V PL+ + K E +LA+ IG
Sbjct: 284 LALITGESIGQVAS---------QTMESLFCTQAAVSMPVFRPLIGMDKEEIIRLAKKIG 334
Query: 189 GQDLVNLILEES 200
D+ L E+
Sbjct: 335 TYDISILPYEDC 346
>gi|57641491|ref|YP_183969.1| PP family ATPase [Thermococcus kodakarensis KOD1]
gi|57159815|dbj|BAD85745.1| ATPase, PP-loop superfamily [Thermococcus kodakarensis KOD1]
Length = 304
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-----Y---GQRNKVELECRL 54
++K L++ SGG+DS+ +E L + Y G+R E ++
Sbjct: 42 KMLKPDEKVLVVVSGGKDSAVTAHVLKKLGYNIECLHINLGIGEYSEKGERYAREQCEKI 101
Query: 55 CVRKKIVELMPKWKDSLGE 73
IV L +GE
Sbjct: 102 GAPLHIVRLKELLGYGIGE 120
>gi|56964514|ref|YP_176245.1| thiamine biosynthesis protein ThiI [Bacillus clausii KSM-K16]
gi|81365682|sp|Q5WEC6|THII_BACSK RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|56910757|dbj|BAD65284.1| thiamine biosynthesis protein ThiI [Bacillus clausii KSM-K16]
Length = 400
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + L L SGG DS + R VE L F + ++K+++L
Sbjct: 173 PVGSSGKVLHLLSGGIDSPVAAHMLMGRGAEVEMLHF-----HSPPYTNE-RAKQKVIDL 226
Query: 64 MPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ H +P + H + + M I + L A
Sbjct: 227 TRELTKFGRTITLHFVPFTDIQTHIHKEVPSSYEMTIMRR------------MMLRIADR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A GI I G + T+ ++ T + +++ V PL+ + K T
Sbjct: 275 IARERGILAISNGESLGQVAS------QTLASMNTINEM---TNLPVLRPLLAMDKETTI 325
Query: 182 KLAQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 326 AYAKRIGTYETSILPYEDC 344
>gi|296491933|ref|YP_003662400.1| hypothetical protein XNC1_p0121 [Xenorhabdus nematophila ATCC
19061]
gi|289176820|emb|CBJ92989.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
Length = 442
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 25/221 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKV-ELECRLCVRKKIVELMPKWKD 69
+ LFSGG DS+ L +S Y G +++ ++ +L R E+
Sbjct: 159 VSLFSGGLDSAIGAIDLLAAGRAPLLVSHAYKGDKSRQDQIAEKLNGRYSRFEINADPHI 218
Query: 70 SLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
G+ I + L ++ +++ ++ + FVP N F+ A L R
Sbjct: 219 YQGDTEITMRTRSLNFLAFAAVGACAVQEVSQQEKVDLFVPE-NG-FISLNAPLTPRR-- 274
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IG T + I +++ + + P + K + +A
Sbjct: 275 ----IGTLSTRTTH-----PHFITSVQK-LFDAAGIPCQIINPYQFKTKGQ---MASQCL 321
Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
+ L++ ++E + +C C C C +R+
Sbjct: 322 NKQLLSEVVESTVSC-----SHWKRRNQQCGVCVPCIIRRA 357
>gi|323527083|ref|YP_004229236.1| hypothetical protein BC1001_2761 [Burkholderia sp. CCGE1001]
gi|323384085|gb|ADX56176.1| hypothetical protein BC1001_2761 [Burkholderia sp. CCGE1001]
Length = 460
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Query: 146 CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTC-Y 204
C + + + + + P ++ K + + G + +L + +C Y
Sbjct: 259 CYPGFTKQLSRFLEKLTRKSIDFYHPALFQTKAQVLMQLEGHGVG--LGQVLAQHWSCSY 316
Query: 205 LGKRDKRYEWGYGCNSCPACYLRQKG 230
+ C C C LR+
Sbjct: 317 DSRWAHAEHRKVHCGICGNCLLRRVA 342
>gi|262276991|ref|ZP_06054784.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
proteobacterium HIMB114]
gi|262224094|gb|EEY74553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
proteobacterium HIMB114]
Length = 377
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 45/138 (32%), Gaps = 20/138 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVE 62
K ++ SGG DSS + V ++ FDYG+ K + C C K I +
Sbjct: 20 KSQTKVVVAMSGGVDSSVVAALLKKDGYDVIGITLQLFDYGKIGKTKGTC--CAGKDIYD 77
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFL 116
K D L H + I + + A P N V R+ +F
Sbjct: 78 -AKKVCDQLEIKH--EVFNYESIFKEEVIEKFADSYIKGETPIPCVDCNQTVKFRD-LFK 133
Query: 117 VFAATLAYRLGITNIVIG 134
A L + G
Sbjct: 134 S-----AKNLDADALATG 146
>gi|229825008|ref|ZP_04451077.1| hypothetical protein GCWU000182_00357 [Abiotrophia defectiva ATCC
49176]
gi|229790755|gb|EEP26869.1| hypothetical protein GCWU000182_00357 [Abiotrophia defectiva ATCC
49176]
Length = 401
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 63/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
I A A+ L SGG DS R +VE + F + +K +
Sbjct: 179 PIGTAGKAMCLLSGGIDSPVAAYMMARRGVKVEAVYF-----HAPPYTSERAKQKVVDLA 233
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L ++ ++ + I I + + ++ + A
Sbjct: 234 RLTARYAGNIKLYVVNFTDIQLAIYEKCPHDELTIIMRRY-------------MMKIAED 280
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA + +V G + + +++ + + V+ P++ K +
Sbjct: 281 LAKKDECFGLVTGESIGQVAS---------QTMQSLLTTNAVCELPVYRPVICFDKQDII 331
Query: 182 KLAQDIGGQDLVNLILEES 200
++Q IG + L E+
Sbjct: 332 NISQRIGTFETSILPFEDC 350
>gi|15669121|ref|NP_247926.1| hypothetical protein MJ_0931 [Methanocaldococcus jannaschii DSM
2661]
gi|2501552|sp|Q58341|THII_METJA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|1591602|gb|AAB98933.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 381
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 31/186 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L L S G DS + R R L + E L +KIVE++ +
Sbjct: 190 KVLCLISDGIDSPVAAFMMIRRGCRAVLL-------HLKMSEEALNKVRKIVEVLSDYDT 242
Query: 70 SLGE---DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L D+ + + + S +N L A A L
Sbjct: 243 ELEFVVYDYKKDIEDIVEKLKSIKKENYTCIFCKRK------------MLKVAEKYAKYL 290
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
IV G + + ++ + + + PL+ L K + K+A++
Sbjct: 291 DCDAIVTGDNLGQVAS---------QTLKNLRVISENINYPILRPLIGLDKNDIVKIAKE 341
Query: 187 IGGQDL 192
IG ++
Sbjct: 342 IGTYEI 347
>gi|323339479|ref|ZP_08079758.1| thiamine biosynthesis protein ThiI [Lactobacillus ruminis ATCC
25644]
gi|323093093|gb|EFZ35686.1| thiamine biosynthesis protein ThiI [Lactobacillus ruminis ATCC
25644]
Length = 410
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 66/198 (33%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS A+ R +E + F K EL
Sbjct: 178 PVGTAGRAMLMLSGGIDSPVAGYLAMKRGVDIEMVHFF------SPPYTSEQALNKAKEL 231
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K +G + + + + + V + L + R L LA
Sbjct: 232 TAKLTPYVGRIQFIEVPF------TEIQETVKHDVPSGYLMT--IQRR--FMLRLTEALA 281
Query: 124 YRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+ G I G S + +E+ + + + V P++ + K E K
Sbjct: 282 KKRGGLAIFNGEALGQVAS----------QTLESMAAINDVTTMPVLRPVVSMDKNEIIK 331
Query: 183 LAQDIGGQDLVNLILEES 200
+AQ I DL + E+
Sbjct: 332 IAQKIDTFDLSIMPFEDC 349
>gi|205822346|sp|B1ZGZ6|MNMA_METPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 385
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 61/197 (30%), Gaps = 32/197 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y + C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACCAGRDIHDARAVAE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D S+ A P N V R+++ +
Sbjct: 74 TLGIPHYVLD---YEDRFRESVIDRFAESYLSGETPIPCVECNRSVKFRDLL------GM 124
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------P 171
A LG + G + + + RA+ A++ + ++ P
Sbjct: 125 ARDLGAEALATGHYVASRA-----QPEGGRALYRALDPARDQSYFLYATTPEQLAFLRFP 179
Query: 172 LMWLKKYETWKLAQDIG 188
L K ET LA+++G
Sbjct: 180 LGERPKDETRALARELG 196
>gi|254788242|ref|YP_003075671.1| thiamine biosynthesis protein ThiI [Teredinibacter turnerae T7901]
gi|237686357|gb|ACR13621.1| thiamine biosynthesis/tRNA modification protein ThiI
[Teredinibacter turnerae T7901]
Length = 490
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 69/191 (36%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS+ + R R F+ G R EL + E+
Sbjct: 175 PMGTQDPVLSLVSGGFDSTVASYLMMKRGLRTHFCFFNLGGR-DHEL--------GVKEI 225
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ H + + + + + KI N+ V R + L A +A
Sbjct: 226 AFYLWNRYSASHRVRFVTVPFEG---VVEEILEKIDPANMG--VVLKR--MMLRAAEKIA 278
Query: 124 YRLGITNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
R I +V G V + P+ + AIE + V PL+ + K E
Sbjct: 279 ARGDIQALVTGEAVAQVSSQTIPN-----LSAIERVC------NTLVLRPLIAMDKPEII 327
Query: 182 KLAQDIGGQDL 192
+L+++IG ++
Sbjct: 328 RLSREIGAEEF 338
>gi|222529697|ref|YP_002573579.1| tRNA-specific 2-thiouridylase MnmA [Caldicellulosiruptor bescii DSM
6725]
gi|222456544|gb|ACM60806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor bescii DSM 6725]
Length = 360
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 50/148 (33%), Gaps = 19/148 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ SGG DSS + + V + Q + E E L +R+K +
Sbjct: 1 MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATM---QIWQTETEDEL-IREKSCCSLTA 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP----GRNI---IFLVF 118
D+ HIL + K V D + T P R I +FL
Sbjct: 57 VDDARRVAHILDIPYYVFNMKDDFKKEVINYFVDEYIKGRTPNPCIMCNRKIKFELFLK- 115
Query: 119 AATLAYRLGITNIVIG---VCETDYSGY 143
A LG+ I G + E D S Y
Sbjct: 116 ---KAMVLGMDYIATGHYAIIEYDKSLY 140
>gi|297526365|ref|YP_003668389.1| Thiamine biosynthesis protein-like protein [Staphylothermus
hellenicus DSM 12710]
gi|297255281|gb|ADI31490.1| Thiamine biosynthesis protein-like protein [Staphylothermus
hellenicus DSM 12710]
Length = 375
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 38/184 (20%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++L SGG DSS +AL R R+ + D G RK+ E + + +
Sbjct: 168 VVLLSGGVDSSLAAWYALKRGTRIIPVFIDLG------KYWSEQARKRFYESISLIYEWV 221
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR------NIIFLVFAATLAYR 125
D I K ++ + + + +P R A+ +A +
Sbjct: 222 PWDKI---------------KFYIVRGAEKIVESANIPARLRCLLCKANMYRIASIIADK 266
Query: 126 LGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
IV G S + + L S V+ P+ ++ K E + A
Sbjct: 267 EKCLGIVTGEAVGQVAS----------QTLRNLYILSRLSPKPVYRPVAFMDKLEIIEQA 316
Query: 185 QDIG 188
+ +G
Sbjct: 317 RKLG 320
>gi|160915191|ref|ZP_02077404.1| hypothetical protein EUBDOL_01199 [Eubacterium dolichum DSM 3991]
gi|158432990|gb|EDP11279.1| hypothetical protein EUBDOL_01199 [Eubacterium dolichum DSM 3991]
Length = 405
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 65/197 (32%), Gaps = 37/197 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL++ SGG DS + R +E + + + K++EL
Sbjct: 183 KALVMLSGGIDSPVAGYLTMKRGIAIECIHY------ASPPYTSKAAQDKVLELARLIAP 236
Query: 70 SLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G HI+P L + + ++ A+ I + A + +
Sbjct: 237 YQGHIRVHIVPFTDLQLAIYKNCDESYAITIMRR------------MMYRIAEKICEKQN 284
Query: 128 ITNIV----IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
IV IG + + +E+ + + + V P+ + K E L
Sbjct: 285 ALAIVNGESIGQVAS-------------QTLESMQTINCVTQLPVIRPVACMDKLEIIDL 331
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 332 AKHIGTYETSILPFEDC 348
>gi|114799235|ref|YP_759017.1| hypothetical protein HNE_0287 [Hyphomonas neptunium ATCC 15444]
gi|114739409|gb|ABI77534.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 456
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 22/137 (16%)
Query: 111 RNIIFLVFAATLA-YRLGITNIV-----------IGVCETDYSGYPDCR--HDTIRAIET 156
R +F AAT A G +V + V ++ PD R A+
Sbjct: 215 RGFLFGAVAATAAGIMKGAEIVVPESGQGTFGPALTVIGHEH---PDVRMSPIFTSALGR 271
Query: 157 AINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLG-KRDKRYEWG 215
++ ES + P +W K ET Q ++ E + +C +R +
Sbjct: 272 FVSRIFESPIRFVHPRVWSTKGETLAALQI----AQLSEGWEVTVSCSRSSRRKIQGSVA 327
Query: 216 YGCNSCPACYLRQKGWM 232
C C C LR++
Sbjct: 328 KHCGVCANCLLRRQSLQ 344
>gi|15679679|ref|NP_276796.1| hypothetical protein MTH1685 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3915120|sp|O27720|THII_METTH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|2622815|gb|AAB86157.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 389
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 58/188 (30%), Gaps = 25/188 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKWK 68
+ L SGG DS + R +V + D E E + + K+ E
Sbjct: 179 KVVALLSGGIDSPVATYLMMKRGCQVVAVHMDNAPFTGEEAEEKVEKIAAKLAEYSA--- 235
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
G + L G S T V + A +A G
Sbjct: 236 ---GVEFKLRTFSYGRYLESCRRGAPE--------KMTCVLCKFG-MYHLAEMVAEEEGA 283
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IV G + + + + M ++ + +PL+ + K E LA+ IG
Sbjct: 284 LAIVDGSSLGQVAS---------QTLPNILATRMGVNIPILSPLIGMDKVEIENLAKRIG 334
Query: 189 GQDLVNLI 196
D+ +
Sbjct: 335 TYDISVIP 342
>gi|242399643|ref|YP_002995068.1| Predicted ATPase of the PP-loop superfamily [Thermococcus sibiricus
MM 739]
gi|242266037|gb|ACS90719.1| Predicted ATPase of the PP-loop superfamily [Thermococcus sibiricus
MM 739]
Length = 275
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
+ +++ K A+ FSGG+DS+ L A +++ VE + D+G K +E + +
Sbjct: 47 LEELMSKVDKAIAAFSGGKDSTVALYLAKEKYKVDVEAVMIDHGFMAKEAIENAKRITEH 106
Query: 60 I 60
+
Sbjct: 107 L 107
>gi|118464789|ref|YP_881907.1| thiamine biosynthesis protein ThiI [Mycobacterium avium 104]
gi|118166076|gb|ABK66973.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycobacterium
avium 104]
Length = 409
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 25/193 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A++L SGG DS A+ R + L C +
Sbjct: 178 PVGSSGRAVVLLSGGFDSPVAAYRAMRRGLACDFLH---------------CTGAPFTDA 222
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+K + + +++ + V R ++L A LA
Sbjct: 223 SSTYKAYALVRQLTRFQPRSRLYVAAVGRAQRTLAASGAGEAQIVAQR-RLYLRLACGLA 281
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+G +V G D G + + + + V PL+ K E
Sbjct: 282 ERIGAQAVVTG----DSLG-----QVASQTLPNLAATEQAATLPVLRPLLGFDKQEILAE 332
Query: 184 AQDIGGQDLVNLI 196
A+ IG ++ L
Sbjct: 333 ARRIGTAEIAMLP 345
>gi|77164187|ref|YP_342712.1| hypothetical protein Noc_0663 [Nitrosococcus oceani ATCC 19707]
gi|76882501|gb|ABA57182.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
Length = 425
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 68/243 (27%), Gaps = 55/243 (22%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L SGG DS + +S + ++ + K L
Sbjct: 141 VTLLSGGLDSFVGAIDLVADGKAPFAVS-----------QVAAGDKQSQADFAAKIGGGL 189
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR----LG 127
+H+ + + ++ R+ IFL + A
Sbjct: 190 --NHLQLNHNVKCPGENERSQR----------------ARSFIFLAYGVLAASAQKHYHD 231
Query: 128 ITNIVIGVCETDY-SGYPDCRHD-------------TIRAIETAINLGMESHVTVHTPLM 173
+ + +CE S P + + +++ E + V P
Sbjct: 232 GERVDLYICENGLISINPPLTPARLGSLSTRTTHPVFLGLFQRLLDVA-ELRIAVRNPYQ 290
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
+ K E + Q + E+ +C R R W C C C +R+ +
Sbjct: 291 FRTKGEML---LECKDQAFLRKHAAETTSC---GRYARNGW-QHCGRCFPCLIRRAAFHA 343
Query: 234 FKE 236
+ +
Sbjct: 344 WGK 346
>gi|30249408|ref|NP_841478.1| argininosuccinate synthase [Nitrosomonas europaea ATCC 19718]
gi|34921586|sp|Q82UP5|ASSY_NITEU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|30138771|emb|CAD85348.1| Argininosuccinate synthase [Nitrosomonas europaea ATCC 19718]
Length = 404
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K A+L FSGG D+S L W D + V T + D GQ ++E V+ I E+
Sbjct: 1 MDKVKKAVLAFSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEIEPARAKAVQFGIREI 60
Query: 64 M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D++ P+ I ++
Sbjct: 61 FIEDLREEFVRDYVFPMFRANTIYEGEYLLGTSIA 95
>gi|312958461|ref|ZP_07772981.1| tRNA sulfurtransferase [Pseudomonas fluorescens WH6]
gi|311287004|gb|EFQ65565.1| tRNA sulfurtransferase [Pseudomonas fluorescens WH6]
Length = 505
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 66/186 (35%), Gaps = 35/186 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R F+ G R EL E + KK
Sbjct: 204 LVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAH-ELGVMEVAHFIWKKYGSSQRVLF 262
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S+ + +L ILG + +S + V R + L A+ +A +L I
Sbjct: 263 VSVPFEEVL-GEILGKVDNSHMG---------------VVLKR--MMLRAASRIADQLQI 304
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P ++ + + + PL+ K + LA+
Sbjct: 305 DALVTGEAISQVSSQTLP----------NLSLIDCVTEKLVLR-PLIASHKQDIIDLAEQ 353
Query: 187 IGGQDL 192
IG D
Sbjct: 354 IGTADF 359
>gi|146296764|ref|YP_001180535.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145410340|gb|ABP67344.1| thiamine biosynthesis/tRNA modification protein ThiI
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 398
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R +E + F Y E + + ++ ++ D
Sbjct: 187 KAHLLLSGGIDSPVAGFMIAKRGVEIEAVHF-YSFPYTGEKAKEKVI--DLCRVLAQFTD 243
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L + I I + + + ++ + A +A + G
Sbjct: 244 RLKLYIVPFTEIQTTIYEKCNERYLTIIMRR-------------FMMKIAERIAKKNGGL 290
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V G + + IE+ I + V PL+ + K E ++A++IG
Sbjct: 291 ALVTGESIGQVAS---------QTIESIICTNAAVSMPVLRPLIGMDKEEIIRIAKNIGT 341
Query: 190 QDLVNLILEES 200
D+ L E+
Sbjct: 342 YDISILPYEDC 352
>gi|227529667|ref|ZP_03959716.1| thiamine-phosphate kinase [Lactobacillus vaginalis ATCC 49540]
gi|227350457|gb|EEJ40748.1| thiamine-phosphate kinase [Lactobacillus vaginalis ATCC 49540]
Length = 400
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 70/197 (35%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +++ SGG DS + R +E + F + L K++ E
Sbjct: 168 PVGTAGKGMMMLSGGIDSPVAAYLGMKRGVSMEMVHFFSPPYTSPQ---ALAKAKQLTEK 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ ++ S+ + + + + V K+ + L V R + L AA L
Sbjct: 225 LARYSGSIK---------FIQVPFAEIQETVKEKVPEGYLMT--VQRR--MMLRLAAALT 271
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +E+ + + + + V P++ K E +
Sbjct: 272 MKRHGLAIFNGESLGQVAS---------QTMESMLVINDVTSLPVLRPVLSYDKTEIIDV 322
Query: 184 AQDIGGQDLVNLILEES 200
A+ I DL L E+
Sbjct: 323 AKKIDTYDLSILPYEDC 339
>gi|170743223|ref|YP_001771878.1| tRNA-specific 2-thiouridylase MnmA [Methylobacterium sp. 4-46]
gi|205816883|sp|B0UIW7|MNMA_METS4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|168197497|gb|ACA19444.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium sp. 4-46]
Length = 382
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 61/192 (31%), Gaps = 22/192 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLRRQGYDVVGITLQLYDHGAATHRRGACCAGQDIHDARRAAE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYRLG 127
++L D ++ A P V R+I F AT A LG
Sbjct: 74 TLGIPHYVLD---YEDRFREAVIDRFAESYIHGETPIPCVECNRSIKFRDLLAT-ALDLG 129
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PLMWLK 176
+ G + R RA+ A++ + ++ PL L
Sbjct: 130 ADALATGHYVASRA-----RPGGGRALYRALDPARDQSYFLYATTPEQLDVLRFPLGELP 184
Query: 177 KYETWKLAQDIG 188
K ET +LA++ G
Sbjct: 185 KDETRRLAREFG 196
>gi|160932368|ref|ZP_02079759.1| hypothetical protein CLOLEP_01204 [Clostridium leptum DSM 753]
gi|156868970|gb|EDO62342.1| hypothetical protein CLOLEP_01204 [Clostridium leptum DSM 753]
Length = 394
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 63/191 (32%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A +L SGG DS R + + F +K+ EL+ + +
Sbjct: 181 KAAVLISGGIDSPVAAWMMAKRGVELTAVHF------ASPPYTSERAEEKVKELLARVSE 234
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G + + + + + + + + T + R + + A+ + R G
Sbjct: 235 YSGRMRLFTVPF------TKIQETIQARCPEELF--TIIMRR--MMIKIASHIGMREGCA 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + + I + + V PL+ + K E ++++ I
Sbjct: 285 ALITGESLGQVAS---------QTIHAIACTDAAAGLPVFRPLIGMDKEEIVRISRKIEA 335
Query: 190 QDLVNLILEES 200
D+ E+
Sbjct: 336 FDISIQPYEDC 346
>gi|288553734|ref|YP_003425669.1| thiamine biosynthesis protein ThiI [Bacillus pseudofirmus OF4]
gi|288544894|gb|ADC48777.1| thiamine biosynthesis protein ThiI [Bacillus pseudofirmus OF4]
Length = 403
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKW 67
LL+ SGG DS + R R+E + F + E L K + + + K+
Sbjct: 181 KVLLMLSGGIDSPVAGYLTMKRGARIEAVHF-----HSPPYTNERALQKVKDLAQTLTKY 235
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
S+ H++P + H N M + + L + +A
Sbjct: 236 GSSI-RLHLVPFTEIQQYLHKEAPSNYQMTLMRR------------MMLRISERIARERD 282
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I I G + T+ ++ T + +++ + PL+ + K E +A+ I
Sbjct: 283 ILAIASGESLGQVAS------QTLHSMNTINEV---TNLPIIRPLITMDKLEVIDIAKKI 333
Query: 188 GGQDLVNLILEES 200
+ L E+
Sbjct: 334 DTFETSILPFEDC 346
>gi|205822138|sp|Q21AM9|MNMA_RHOPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 400
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 60/199 (30%), Gaps = 36/199 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSST + V ++ Y + + C + I +
Sbjct: 15 RIVVAMSGGVDSSTTAALLKSEGYDVVGITLQLYDHGAAIHRKGACCAGQDIHDARAVAD 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R+I F + A
Sbjct: 75 RIGIPHYVLD---YESRFQESVIDSFAASYATGETP---VPCIECNRSIKFRDL-LSTAR 127
Query: 125 RLGITNIVIG---------------VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
LG + + G VC +D R + T +
Sbjct: 128 ELGASALATGHYVSSRRLADGSRALVCASDAD-----RDQSYFLFATTRDQLDYLRF--- 179
Query: 170 TPLMWLKKYETWKLAQDIG 188
PL + K +T +LA+ G
Sbjct: 180 -PLGDMTKPQTRELARKFG 197
>gi|182679942|ref|YP_001834088.1| tRNA-specific 2-thiouridylase MnmA [Beijerinckia indica subsp.
indica ATCC 9039]
gi|205813049|sp|B2IBH3|MNMA_BEII9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|182635825|gb|ACB96599.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 431
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 56/187 (29%), Gaps = 12/187 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V + C + I +
Sbjct: 31 RVVVAMSGGVDSSVVAALLKREGYEVIGVTLQLYDHGEAVHRKGACCAGQDIQDARQVAD 90
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L + + A P V + I A LG
Sbjct: 91 QLGIPHYVLD---YEERFRRKVIDPFAQSYATGETPIPCVSCNSEIKFADLFETAQHLGA 147
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT-VHTPLMWLKKYETW 181
+ G D R+++++ + + + + PL L K +
Sbjct: 148 DVLATG-HYVSSKAEADGGRALYRSLDSSRDQSYFLFATTNAQLELLRFPLGDLAKPDVR 206
Query: 182 KLAQDIG 188
++A+ +G
Sbjct: 207 QMARQLG 213
>gi|116053265|ref|YP_793588.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa
UCBPP-PA14]
gi|122256718|sp|Q02EP8|THII_PSEAB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|115588486|gb|ABJ14501.1| thiamin biosynthesis protein ThiI [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 484
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 63/188 (33%), Gaps = 29/188 (15%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R + F+ G R EL W+
Sbjct: 180 EQVLVLMSGGFDSTVAAYQMMRRGMISHFVFFNLGGRAH-ELGVMEVAHY-------LWE 231
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L +++ + + + K+ D+ + T R + L A+ +A RL +
Sbjct: 232 KYGRSQRVLFISVPFE----EVVGEILTKVDDSYMGVTL--KR--MMLRAASRVAERLEL 283
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P + + V PL+ K + A+
Sbjct: 284 DALVTGEAISQVSSQTLP-----------NLSVIDRVTDTLVLRPLIVSHKQDIIDTARQ 332
Query: 187 IGGQDLVN 194
IG +
Sbjct: 333 IGTAEFAR 340
>gi|170290811|ref|YP_001737627.1| thiamine biosynthesis/tRNA modification protein ThiI [Candidatus
Korarchaeum cryptofilum OPF8]
gi|170174891|gb|ACB07944.1| thiamine biosynthesis/tRNA modification protein ThiI [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 373
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 41/199 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L L SGG DS + R ++ L F ++ E E + KIV ++ ++
Sbjct: 176 KVLALISGGIDSPVAAWLLMRRGAQIIPLHFR---KSSAEEETFI----KIVNVLRRYSY 228
Query: 70 SLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + ++ L +IS + + + L+ A +A +G
Sbjct: 229 GVKMEPMILEHGEFLSEISREAREWTCLLCKRR--------------MLLTANRIAKEIG 274
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV---TVHTPLMWLKKYETWKLA 184
IV G D G A +T NL +ES V PL+ + K + K+A
Sbjct: 275 AHGIVTG----DSLG--------QVASQTLANLEVESRCLEKPVFRPLIGMDKEDIVKIA 322
Query: 185 QDIGGQDLVNLILEESHTC 203
++IG D +++ +E +C
Sbjct: 323 KEIGTYD-ISISYKE--SC 338
>gi|296133414|ref|YP_003640661.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermincola sp. JR]
gi|296031992|gb|ADG82760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermincola potens JR]
Length = 358
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 23/194 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPK 66
++ SGG DSS + ++ V ++ Q E + C VE +
Sbjct: 3 KSKVVVAMSGGVDSSLAAALLQEQGYDVIGVTM---QIWPAEEQAEGGCCSLAAVEDARR 59
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYR 125
D+LG + + D+ ++ + + PN V R + F A
Sbjct: 60 VADTLGIPYYVM--NFRDLFRKTVIADFCAEYMAGRTPNPCIVCNRKVKFEAL-LQKALA 116
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----------TPLMW 174
LG I G S Y + R + + A++ G + ++ PL
Sbjct: 117 LGAEYIATG-HYARLS-YDEARRRYL--MRRALDRGKDQTYALYNLTQYQLKHTLMPLGN 172
Query: 175 LKKYETWKLAQDIG 188
K E ++A +G
Sbjct: 173 YTKAEAREMAAKLG 186
>gi|319403803|emb|CBI77387.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella rochalimae ATCC BAA-1498]
Length = 409
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 35/129 (27%), Gaps = 4/129 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
K ++ SGG DSS V ++ Y C + I +
Sbjct: 13 KNSRIVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGAATHRVGACCAGQDIEDARR 72
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +IL + ++ A P V + T AY
Sbjct: 73 VAETLGVPHYILD---YEERFREAVINPFAESYAHGETPIPCVSCNQTVKFSDLLTTAYE 129
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 130 LGADALATG 138
>gi|302671975|ref|YP_003831935.1| thiamine biosynthesis/tRNA modification protein ThiI [Butyrivibrio
proteoclasticus B316]
gi|302396448|gb|ADL35353.1| thiamine biosynthesis/tRNA modification protein ThiI [Butyrivibrio
proteoclasticus B316]
Length = 400
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 66/200 (33%), Gaps = 30/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I A A+LL SGG DS R +E + F+ ++K+++L
Sbjct: 181 PIGTAGKAMLLLSGGIDSPVAGYMVAKRGVDIEAIYFN------APPYTSEKAKQKVIDL 234
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G+ H++ + + + I + A
Sbjct: 235 AGVVAKYTGKVRLHVINFTDIQMYIYEKCPHDELTIIMRRY------------MMKIADI 282
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYET 180
+A + G ++ G + + +++ + G + + + V+ PL+ K +
Sbjct: 283 IAGQTGCMGLITGESIGQVAS---------QTMQSLMCTGEVVTDMPVYRPLIAFDKQDI 333
Query: 181 WKLAQDIGGQDLVNLILEES 200
++ I + L E+
Sbjct: 334 VDISVKIDAYETSILPYEDC 353
>gi|296391968|ref|ZP_06881443.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa PAb1]
Length = 484
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 29/188 (15%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R + F+ G R EL ++E+
Sbjct: 180 EQVLVLMSGGFDSTVAAYQMMRRGMISHFVFFNLGGRAH-EL--------GVMEVAHYLW 230
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ G + + + + + K+ D+ + T R + L A+ +A RL +
Sbjct: 231 EKYGRSQRV---LFVSVPFEEVVGEILTKVDDSYMGVTL--KR--MMLRAASRVAERLEL 283
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P + + V PL+ K + A+
Sbjct: 284 DALVTGEAISQVSSQTLP-----------NLSVIDRVTDTLVLRPLIVSHKQDIIDTARQ 332
Query: 187 IGGQDLVN 194
IG +
Sbjct: 333 IGTAEFAR 340
>gi|27382106|ref|NP_773635.1| tRNA-specific 2-thiouridylase MnmA [Bradyrhizobium japonicum USDA
110]
gi|81735060|sp|Q89ES7|MNMA_BRAJA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|27355276|dbj|BAC52260.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bradyrhizobium japonicum USDA 110]
Length = 393
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 57/199 (28%), Gaps = 36/199 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSST + V ++ Y + C + I +
Sbjct: 15 RVVVAMSGGVDSSTTAALLKAEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARDVAA 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L D S+ N A P VP R+I F T A
Sbjct: 75 KLGIPHYVLD---YEDRFRESVIDNFADSYALGETP---VPCIECNRSIKFRDLLKT-AR 127
Query: 125 RLGITNIVIG---------------VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
LG + G VC D R + T
Sbjct: 128 ELGAQALATGHYVASRRLDDGSRVLVCAADAD-----RDQSYFLFATTQEQLDYLRF--- 179
Query: 170 TPLMWLKKYETWKLAQDIG 188
PL + K ET +LA+ G
Sbjct: 180 -PLGDMTKPETRELARRFG 197
>gi|266621758|ref|ZP_06114693.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
hathewayi DSM 13479]
gi|288866555|gb|EFC98853.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
hathewayi DSM 13479]
Length = 392
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 63/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +++ + F + +K +
Sbjct: 176 PVGTNGKAMLLLSGGIDSPVAGYMISKRGVKIDAVYF-----HAPPYTSERAKQKVVDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ K+ + + I I + + + ++ + A
Sbjct: 231 KLVSKYSGPIHLHIVNFTDIQLYIYDQCPHEELTIIMRRY-------------MMRIAER 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA G ++ G + + +++ + V P++ K E
Sbjct: 278 LAADAGAQALITGESIGQVAS---------QTMQSLAATDAACTMPVFRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ IG + L E+
Sbjct: 329 DVAEKIGTYETSVLPFEDC 347
>gi|15600311|ref|NP_253805.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa PAO1]
gi|107104214|ref|ZP_01368132.1| hypothetical protein PaerPA_01005287 [Pseudomonas aeruginosa PACS2]
gi|218894217|ref|YP_002443086.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa LESB58]
gi|254238176|ref|ZP_04931499.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa C3719]
gi|254244001|ref|ZP_04937323.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa 2192]
gi|313110158|ref|ZP_07796058.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa 39016]
gi|20140812|sp|Q9HU66|THII_PSEAE RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|226703949|sp|B7V3L1|THII_PSEA8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|9951416|gb|AAG08503.1|AE004925_1 thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa PAO1]
gi|126170107|gb|EAZ55618.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa C3719]
gi|126197379|gb|EAZ61442.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa 2192]
gi|218774445|emb|CAW30262.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa LESB58]
gi|310882560|gb|EFQ41154.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa 39016]
Length = 484
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 29/188 (15%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R + F+ G R EL ++E+
Sbjct: 180 EQVLVLMSGGFDSTVAAYQMMRRGMISHFVFFNLGGRAH-EL--------GVMEVAHYLW 230
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ G + + + + + K+ D+ + T R + L A+ +A RL +
Sbjct: 231 EKYGRSQRV---LFVSVPFEEVVGEILTKVDDSYMGVTL--KR--MMLRAASRVAERLEL 283
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P + + V PL+ K + A+
Sbjct: 284 DALVTGEAISQVSSQTLP-----------NLSVIDRVTDTLVLRPLIVSHKQDIIDTARQ 332
Query: 187 IGGQDLVN 194
IG +
Sbjct: 333 IGTAEFAR 340
>gi|196007190|ref|XP_002113461.1| hypothetical protein TRIADDRAFT_26341 [Trichoplax adhaerens]
gi|190583865|gb|EDV23935.1| hypothetical protein TRIADDRAFT_26341 [Trichoplax adhaerens]
Length = 667
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/217 (21%), Positives = 72/217 (33%), Gaps = 50/217 (23%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI---V 61
+ AL+L SGG DS+ C + DRV L D G K E + +KI +
Sbjct: 212 RDKKALVLVSGGVDSAVCAALLHKALGSDRVIALHIDNGFMRKNESDDVKISLRKIGLDI 271
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNII---FL 116
E++ P+ + + + + + L N + P R+II F+
Sbjct: 272 EILHSAYHFYTSHTSYPI----------MLEGIPTRHITDPLVNVYSPEEKRHIIGDTFV 321
Query: 117 VFAATLAYRLGIT--NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------- 167
A LGI +IV+ R D I + E+HV
Sbjct: 322 RVANEYLKNLGIEPQDIVLAQGTL--------RPDLIESASK--EASSEAHVIKTHHNDT 371
Query: 168 -----------VHTPLMWLKKYETWKLAQDIGGQDLV 193
+ PL K E L ++G +
Sbjct: 372 DLVRQLRLQNGIIEPLQDFHKDEVRALGIELGLPPHL 408
>gi|152989134|ref|YP_001351170.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa PA7]
gi|189030639|sp|A6VDN5|THII_PSEA7 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|150964292|gb|ABR86317.1| thiamine biosynthesis/tRNA modification protein ThiI [Pseudomonas
aeruginosa PA7]
Length = 484
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 29/188 (15%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R + F+ G R EL ++E+
Sbjct: 180 EQVLVLMSGGFDSTVAAYQMMRRGMISHFVFFNLGGRAH-EL--------GVMEVAHYLW 230
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ G + + + + + K+ D+ + T R + L A+ +A RL +
Sbjct: 231 EKYGRSQRV---LFVSVPFEEVVGEILTKVDDSYMGVTL--KR--MMLRAASRVAERLEL 283
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P + + V PL+ K + A+
Sbjct: 284 DALVTGEAISQVSSQTLP-----------NLSVIDRVTDTLVLRPLIVSHKQDIIDTARQ 332
Query: 187 IGGQDLVN 194
IG +
Sbjct: 333 IGTAEFAR 340
>gi|291545271|emb|CBL18380.1| Thiamine biosynthesis ATP pyrophosphatase [Ruminococcus sp. 18P13]
Length = 391
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 58/198 (29%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + ALLL SGG DS R V + F +
Sbjct: 173 PVGSSGRALLLLSGGIDSPVAGYMMAKRGICVSAIHF---------------ISPPYTSE 217
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
K + I+P TK +K Q T + R + + A +
Sbjct: 218 RALLKVETLAEKIVPYCGSMAFFCVPFTKIQETIKDQCPEELFTVIMRR--LMMEVAQQI 275
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A R G ++ G + + ++ + V PL+ + K E
Sbjct: 276 ADREGCLALITGESVGQVAS---------QTMQALCATDAVCRMPVFRPLIGMDKTEIIA 326
Query: 183 LAQDIGGQDLVNLILEES 200
+++ I D E+
Sbjct: 327 ISRKIDTYDTSIEPYEDC 344
>gi|332982256|ref|YP_004463697.1| thiamine biosynthesis/tRNA modification protein ThiI [Mahella
australiensis 50-1 BON]
gi|332699934|gb|AEE96875.1| thiamine biosynthesis/tRNA modification protein ThiI [Mahella
australiensis 50-1 BON]
Length = 390
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 62/201 (30%), Gaps = 33/201 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDY-GQRNKVELECRLCVRKK 59
+ A A+LL SGG DS R + + F Y QR + ++E
Sbjct: 174 PVGTAGKAMLLISGGIDSPVAGYMIAKRGVELSAVHYYSFPYTSQRARDKVE-------D 226
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
I ++ + + + I I + + + + A
Sbjct: 227 ICRILSAYTGPIKIHMVPFTDIQQAIYERCPDNQLTILTRR-------------FMMRIA 273
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
LA + G IV G + TI ++ + V PL+ K E
Sbjct: 274 QKLARQNGCKAIVTGESIGQVAS------QTIDSLAVTEA---AVDMLVLRPLIAFDKVE 324
Query: 180 TWKLAQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 325 IMDAAKKIGTYETSILPYEDC 345
>gi|90422506|ref|YP_530876.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
BisB18]
gi|90104520|gb|ABD86557.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopseudomonas palustris BisB18]
Length = 404
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 60/199 (30%), Gaps = 36/199 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSST + V ++ Y + + C + I +
Sbjct: 19 RIVVAMSGGVDSSTTAALLKSEGYDVVGITLQLYDHGAAIHRKGACCAGQDIHDARAVAD 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R+I F + A
Sbjct: 79 RIGIPHYVLD---YESRFQESVIDSFAASYATGETP---VPCIECNRSIKFRDL-LSTAR 131
Query: 125 RLGITNIVIG---------------VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
LG + + G VC +D R + T +
Sbjct: 132 ELGASALATGHYVSSRRLADGSRALVCASDAD-----RDQSYFLFATTRDQLDYLRF--- 183
Query: 170 TPLMWLKKYETWKLAQDIG 188
PL + K +T +LA+ G
Sbjct: 184 -PLGDMTKPQTRELARKFG 201
>gi|154151526|ref|YP_001405144.1| hypothetical protein Mboo_1987 [Candidatus Methanoregula boonei
6A8]
gi|154000078|gb|ABS56501.1| thiamine biosynthesis protein [Methanoregula boonei 6A8]
Length = 213
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 30/188 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELMPKWK 68
+ L SGG DS L + + + D R ++ L + + + + L +
Sbjct: 5 VSLISGGIDSPVAAYLMLHQGVEIIAVHMD--NRPFTDEKNLHKAMNLIRHLQHLTQRPI 62
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ H +H + +N + + A +A + G
Sbjct: 63 KTYVVPH--------GPNHIAFARNCERHLHCLFCRR--------MMYRIAERIAEKEGA 106
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + + ++ + + + V PL+ + K E +A+ IG
Sbjct: 107 VGILTGESLGQVAS---------QTLQNLMVENLVIRIPVVRPLIGMDKVEIIDIARRIG 157
Query: 189 GQDLVNLI 196
++ L
Sbjct: 158 TYEISTLP 165
>gi|147677391|ref|YP_001211606.1| tRNA-specific 2-thiouridylase MnmA [Pelotomaculum thermopropionicum
SI]
gi|205816885|sp|A5D3F0|MNMA_PELTS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|146273488|dbj|BAF59237.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Pelotomaculum thermopropionicum SI]
Length = 365
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 65/197 (32%), Gaps = 19/197 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELE-CRLCVRKKIVELM 64
+ ++ SGG DSS + L++ V ++ + + E + R C ++
Sbjct: 2 EKTKVVVAMSGGVDSSVTAALLLEQGFEVIGITMQIWNPGEEAESKGERTCCSLTAIDDA 61
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ D LG H + I + + PN P R + F
Sbjct: 62 RRVADKLGISHYV--LNFRSIFEEKVIDYFTSEYLRGRTPN---PCIACNRYVKFEAL-L 115
Query: 121 TLAYRLGITNIVIGVCE-----TDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--PLM 173
A +G I G +Y Y R R +T + GM T PL
Sbjct: 116 DRALSIGAEYIATGHYARLGYSGEYGRYTVRRPVDRRKDQTYVLYGMTQRQIARTMMPLG 175
Query: 174 WLKKYETWKLAQDIGGQ 190
K + K+A+D G
Sbjct: 176 NYTKGQVRKIAEDFGLP 192
>gi|70733891|ref|YP_257531.1| thiamine biosynthesis protein ThiI [Pseudomonas fluorescens Pf-5]
gi|68348190|gb|AAY95796.1| thiamine biosynthesis protein ThiI [Pseudomonas fluorescens Pf-5]
Length = 505
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 35/186 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R F+ G R EL E + KK
Sbjct: 204 LVLMSGGFDSTVAAYQIMRRGLMGHFCFFNLGGRAH-ELGVMEVAHYIWKKYGSSQRVLF 262
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S+ + +L G+I ++ + ++ + L A+++A RL I
Sbjct: 263 VSVPFEEVL-----GEILGKVDNSHMGVILKR-------------MMLRAASSIADRLHI 304
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P ++ + + + PL+ K + LA +
Sbjct: 305 DALVTGEAISQVSSQTLP----------NLSVIDCVTEKLVLR-PLIASHKQDIIDLAVE 353
Query: 187 IGGQDL 192
IG D
Sbjct: 354 IGTADF 359
>gi|300214745|gb|ADJ79161.1| Probable thiamine biosynthesis protein thiI [Lactobacillus
salivarius CECT 5713]
Length = 405
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS A+ R +E + F K +L
Sbjct: 173 PVGTAGKAMLMLSGGIDSPVAGYLAMKRGVDIEMVHFF------SPPYTSEQALNKAKDL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K +G+ + + + + + V K+ L + R L +A
Sbjct: 227 TAKLTPYVGKIRFIQVPF------TEIQETVKEKVPSGYLMT--IQRR--FMLRLTEAIA 276
Query: 124 YRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
R I G S + +E+ + + + + P++ + K E K
Sbjct: 277 QRRKGLAIFNGEALGQVAS----------QTLESMAAINDVTTMPILRPVVSMDKNEIIK 326
Query: 183 LAQDIGGQDLVNLILEES 200
+AQDI DL + E+
Sbjct: 327 IAQDIDTFDLSIMPFEDC 344
>gi|90962048|ref|YP_535964.1| thiamine biosynthesis protein [Lactobacillus salivarius UCC118]
gi|227891067|ref|ZP_04008872.1| thiamine biosynthesis protein [Lactobacillus salivarius ATCC 11741]
gi|301300909|ref|ZP_07207081.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|122448846|sp|Q1WT71|THII_LACS1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|90821242|gb|ABD99881.1| Thiamine biosynthesis protein [Lactobacillus salivarius UCC118]
gi|227867156|gb|EEJ74577.1| thiamine biosynthesis protein [Lactobacillus salivarius ATCC 11741]
gi|300851508|gb|EFK79220.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 405
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A A+L+ SGG DS A+ R +E + F K +L
Sbjct: 173 PVGTAGKAMLMLSGGIDSPVAGYLAMKRGVDIEMVHFF------SPPYTSEQALNKAKDL 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K +G+ + + + + + V K+ L + R L +A
Sbjct: 227 TAKLTPYVGKIRFIQVPF------TEIQETVKEKVPSGYLMT--IQRR--FMLRLTEAIA 276
Query: 124 YRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
R I G S + +E+ + + + + P++ + K E K
Sbjct: 277 QRRKGLAIFNGEALGQVAS----------QTLESMAAINDVTTMPILRPVVSMDKNEIIK 326
Query: 183 LAQDIGGQDLVNLILEES 200
+AQDI DL + E+
Sbjct: 327 IAQDIDTFDLSIMPFEDC 344
>gi|297181711|gb|ADI17893.1| thiamine biosynthesis ATP pyrophosphatase [uncultured Chloroflexi
bacterium HF0200_06I16]
Length = 397
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 61/186 (32%), Gaps = 29/186 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++ SGG DS + R + + F + L R + K + + +
Sbjct: 182 VMLSGGIDSPVAAWQMMKRGCQAMFVHF-----HSYPLVDRTSMEKAVDLVDHLNRHQYE 236
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYRLGITN 130
+ L + LG+I + + P ++ V R + LA R
Sbjct: 237 SN--LFMVPLGEIQKQIIL----------SCPPSYRVVLYR-RFMVRITEALAKRNRAKA 283
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
IV G C + +E + + + + PL+ K E ++QDIG
Sbjct: 284 IVTGES---------CGQVASQTLENIAVVDNAAGMPILRPLIGNNKEEIVDMSQDIGTF 334
Query: 191 DLVNLI 196
L
Sbjct: 335 STSILP 340
>gi|147920753|ref|YP_685441.1| putative thiamine biosynthesis ATP pyrophosphatase [uncultured
methanogenic archaeon RC-I]
gi|56295614|emb|CAH04855.1| thiamine biosynthesis protein (ATP pyrophosphatase [uncultured
archaeon]
gi|110620837|emb|CAJ36115.1| putative thiamine biosynthesis ATP pyrophosphatase [uncultured
methanogenic archaeon RC-I]
Length = 391
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 23/181 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L SGG DS + R + L D E IV + +W
Sbjct: 184 VALISGGIDSPVAAWLMMKRGCEIIPLYMD---NTPYLGEDAKAKTIDIVRKLHEWAPGR 240
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ + + + +Q N T V + A +A + G I
Sbjct: 241 EMKMYI----------APHGQPLREFLQKGNKKYTCV-FCKHLMYKVARAIAEKEGAHGI 289
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
+ G + + E + + ++ PL+ L K E +A+ IG D
Sbjct: 290 ITGSSLGQVAS---------QTSENMMAEAYDVDFPIYHPLIGLDKEEIMTIAKKIGTYD 340
Query: 192 L 192
+
Sbjct: 341 I 341
>gi|292655800|ref|YP_003535697.1| thiamine biosynthesis/tRNA modification protein ThiI [Haloferax
volcanii DS2]
gi|291370657|gb|ADE02884.1| thiamine biosynthesis/tRNA modification protein ThiI [Haloferax
volcanii DS2]
Length = 391
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 61/191 (31%), Gaps = 30/191 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMPK 66
A+ L SGG DS + R + + DYG + R + + + +
Sbjct: 182 RAVSLVSGGIDSPVATWELMRRGCEIVPVYVDLGDYGG-----ADHRARAIETVRTIARR 236
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ H++P + + S+ + ++ L AA +A
Sbjct: 237 APNADMRVHVVPAGDVVERLMESVDDTRMLSLRRA-------------MLAIAAEVATDE 283
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+IV G S + E VH PL+ K + A+D
Sbjct: 284 HAHSIVTGESLGQKSS---------QTGENLAVTEAAVDYPVHRPLLTRDKTDIVAAARD 334
Query: 187 IGGQDLVNLIL 197
+G D L +
Sbjct: 335 LGTYDDSTLPV 345
>gi|41615210|ref|NP_963708.1| hypothetical protein NEQ423 [Nanoarchaeum equitans Kin4-M]
gi|40068934|gb|AAR39269.1| NEQ423 [Nanoarchaeum equitans Kin4-M]
Length = 433
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 26/184 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL LFSGG DS+ +A+ R + F+ + K + E+ K K+
Sbjct: 170 KALSLFSGGFDSTLTAIFAIKRGVIPIIVYFN---------PFDDFIEKTVYEVYEKIKE 220
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + + L NV K + L II A LA +LG+
Sbjct: 221 FSPDSIFISIPFSEVYYQ--LLMNVEEKYRQILLK--------IIMHKTAKALAKKLGLK 270
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+I IG S T++++E I+ ++V P+ L K E + +++G
Sbjct: 271 SIFIGESIGQKST------QTLKSLE-TIDSLTLDSISVFRPIAGLDKEEVIEYIRELGL 323
Query: 190 QDLV 193
D V
Sbjct: 324 YDYV 327
>gi|296109903|ref|YP_003616852.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanocaldococcus infernus ME]
gi|295434717|gb|ADG13888.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanocaldococcus infernus ME]
Length = 371
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 55/188 (29%), Gaps = 31/188 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+ L S G DS + R R L + E L +KIVE+
Sbjct: 173 PVGSQGRAVCLVSDGIDSPVAAFMMIKRGCRGVIL-------HLKITEEALNKVRKIVEV 225
Query: 64 MPKWKDSLGE---DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + L D+ L + + S + L A
Sbjct: 226 LNDYDPELEFVVYDYKKELEEIKEKLKSIKKEEYTCIFCKKK------------MLKIAE 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A L IV G + + ++ + + PL+ K E
Sbjct: 274 KYAKYLNCDAIVTGDNLGQVAS---------QTLKNLRVISSSIEFPILRPLIGFDKNEI 324
Query: 181 WKLAQDIG 188
++A+ IG
Sbjct: 325 VEIAKSIG 332
>gi|224476804|ref|YP_002634410.1| hypothetical protein Sca_1320 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421411|emb|CAL28225.1| truncated putative thiamine biosynthesis ATP pyrophosphatase
(fragment 2) [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 243
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 15 KTLLMLSGGIDSPVAGMEIMRRGVTIEAIHF-----HSPPFTSEK-AKEKVIELTRILAE 68
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P + + + + +T R ++ A + + +G
Sbjct: 69 HVGPIKLHIVPFTEV-------QKQINKVVYDRYTMTST----RRMMM-RIADKVVHNIG 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + +++ + + V PL+ L K + A++
Sbjct: 117 ADAIVNGENLGQVAS---------QTLKSMYAINHVTTTPVLRPLLTLDKEDIVIKAKEY 167
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 168 GTYETSIQPFEDC 180
>gi|225848332|ref|YP_002728495.1| tRNA-specific 2-thiouridylase MnmA [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644575|gb|ACN99625.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 351
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 4/98 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSST + +V ++ + ++ L+ ++C K + K
Sbjct: 2 KKVVVGLSGGVDSSTAAFILKQQGYQVIGITLKLSEVDQCSLDKQVCCSTKDILDAKKVA 61
Query: 69 DSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
LG H ++ DI + + Q PN
Sbjct: 62 SFLGIPHYVID---WQDIFKEKVIDYFIREYQSGYTPN 96
>gi|239981283|ref|ZP_04703807.1| thiamine biosynthesis protein ThiI [Streptomyces albus J1074]
Length = 422
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 72/200 (36%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ + AL+L SGG DS A+ R R + + F Y N + +++
Sbjct: 188 PVGTSGRALVLLSGGYDSPVAAHRAMRRGLRCDFVHFTGAPY--TNAASAFKAYALAREL 245
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
P G+ HI+ L K +A+ V G+ + + A+
Sbjct: 246 NRYQPP-----GKLHIVALGH--------AQKQLAVVGAGRFQ----VVGQRRLMVKAAS 288
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA RL +V G D G + + + + + V PL+ +K E
Sbjct: 289 VLARRLRAQALVTG----DALG-----QVASQTLSNMALVDEAATLPVLRPLIGWEKQEI 339
Query: 181 WKLAQDIGGQDLVNLILEES 200
A+ +G ++ L E+
Sbjct: 340 IDEARRVGTAEISVLPDEDC 359
>gi|205374502|ref|ZP_03227298.1| thiamine biosynthesis protein [Bacillus coahuilensis m4-4]
Length = 401
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS + R +E + F + ++K++EL
Sbjct: 178 KAMLMLSGGLDSPVAGYLTMKRGVEIEAVHF-----HSPPYTSERS-KEKVIELARILSG 231
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA-ATLAYRL 126
G HI+P + H + +N M + L A
Sbjct: 232 FSGTIKLHIVPFTEVQQTIHQQVPENYTMTSTRR------------MMLKITDLIRAKEN 279
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G+ IV G + + + + + + V PL+ K + A++
Sbjct: 280 GL-AIVTGESLGQVAS---------QTLHSMSAINAVTSTPVLRPLISNDKTDIIDSAKE 329
Query: 187 IGGQDLVNLILEES 200
IG D L E+
Sbjct: 330 IGTYDTSILPFEDC 343
>gi|301167622|emb|CBW27205.1| thiamine biosynthesis protein thiI [Bacteriovorax marinus SJ]
Length = 401
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 37/191 (19%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L SGG DS R + + + F +
Sbjct: 184 VTLISGGFDSPVASYMMSKRGCKQDFIFF----------------------YAYPYVGEE 221
Query: 72 GEDHILPL-AILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIF----LVFAATLAYR 125
++ I+ + ++LG + + N + N + R I+F + A LA R
Sbjct: 222 VKEKIIDICSVLGQYQKNCKLWVIPFGEIQNAISNDCYEEYRTILFRKYMIDTANLLANR 281
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ +V G D G + + + L S + PL+ K E + AQ
Sbjct: 282 VKADALVTG----DALG-----QVSSQTMRNMSVLDNFSKRLILRPLVGFNKIEIIRKAQ 332
Query: 186 DIGGQDLVNLI 196
++G D+ +
Sbjct: 333 EVGTHDISIIP 343
>gi|104779669|ref|YP_606167.1| thiamine biosynthesis protein ThiI [Pseudomonas entomophila L48]
gi|95108656|emb|CAK13350.1| thiamine biosynthesis protein ThiI [Pseudomonas entomophila L48]
Length = 484
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 29/183 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL WK
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAH-ELGVMEVAHF-------LWKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + V L + L AA +A RL I +
Sbjct: 235 SSQRVLFISVPFEEVVGEILNKVDNSYMGVTLKR--------MMLRAAARMADRLEIDAL 286
Query: 132 VIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
V G + + P + + V PL+ K + A +IG
Sbjct: 287 VTGEAISQVSSQTLP-----------NLSIIDSATEKLVLRPLLASHKQDIIDQATEIGT 335
Query: 190 QDL 192
D
Sbjct: 336 ADF 338
>gi|291453141|ref|ZP_06592531.1| ThiI [Streptomyces albus J1074]
gi|291356090|gb|EFE82992.1| ThiI [Streptomyces albus J1074]
Length = 410
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 72/200 (36%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ + AL+L SGG DS A+ R R + + F Y N + +++
Sbjct: 176 PVGTSGRALVLLSGGYDSPVAAHRAMRRGLRCDFVHFTGAPY--TNAASAFKAYALAREL 233
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
P G+ HI+ L K +A+ V G+ + + A+
Sbjct: 234 NRYQPP-----GKLHIVALGH--------AQKQLAVVGAGRFQ----VVGQRRLMVKAAS 276
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
LA RL +V G D G + + + + + V PL+ +K E
Sbjct: 277 VLARRLRAQALVTG----DALG-----QVASQTLSNMALVDEAATLPVLRPLIGWEKQEI 327
Query: 181 WKLAQDIGGQDLVNLILEES 200
A+ +G ++ L E+
Sbjct: 328 IDEARRVGTAEISVLPDEDC 347
>gi|37679057|ref|NP_933666.1| thiamine biosynthesis protein ThiI [Vibrio vulnificus YJ016]
gi|44888371|sp|Q7MN44|THII_VIBVY RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|37197799|dbj|BAC93637.1| thiamine biosynthesis ATP pyrophosphatase [Vibrio vulnificus YJ016]
Length = 482
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 25/181 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS + R +V F+ G K++ + S
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVAHFLWNKYGSS 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ + + ++ + K++D + V R +F+ A +A + I +
Sbjct: 235 AKVRFISVDFEPVVA------EILEKVEDGQMG--VVLKR--MFMRAAGMVAEKFDIQAL 284
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G S + + ++ + + + PL+ K E K+A+DIG +D
Sbjct: 285 VTGEALGQVSS---------QTLTNLRHIDVVTDRLILRPLINWDKDEIIKVARDIGTED 335
Query: 192 L 192
Sbjct: 336 F 336
>gi|27363785|ref|NP_759313.1| tRNA s(4)U8 sulfurtransferase [Vibrio vulnificus CMCP6]
gi|320157194|ref|YP_004189573.1| thiamine biosynthesis protein thiI [Vibrio vulnificus MO6-24/O]
gi|29611890|sp|Q8DFA8|THII_VIBVU RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|27359901|gb|AAO08840.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
vulnificus CMCP6]
gi|319932506|gb|ADV87370.1| thiamine biosynthesis protein thiI [Vibrio vulnificus MO6-24/O]
Length = 482
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 25/181 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS + R +V F+ G K++ + S
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVAHFLWNKYGSS 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ + + ++ + K++D + V R +F+ A +A + I +
Sbjct: 235 AKVRFISVDFEPVVA------EILEKVEDGQMG--VVLKR--MFMRAAGMVAEKFDIQAL 284
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G S + + ++ + + + PL+ K E K+A+DIG +D
Sbjct: 285 VTGEALGQVSS---------QTLTNLRHIDVVTDRLILRPLINWDKDEIIKVARDIGTED 335
Query: 192 L 192
Sbjct: 336 F 336
>gi|257439138|ref|ZP_05614893.1| thiamine biosynthesis/tRNA modification protein ThiI
[Faecalibacterium prausnitzii A2-165]
gi|257198389|gb|EEU96673.1| thiamine biosynthesis/tRNA modification protein ThiI
[Faecalibacterium prausnitzii A2-165]
Length = 399
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 63/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + AL + SGG DS R ++ + F
Sbjct: 174 PVGTSGRALNMLSGGIDSPVAAYRMAKRGLALDHIHF---------------ASPPYTSE 218
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAAT 121
K K I P ++ TK + +N P+ V R + A
Sbjct: 219 RAKLKVKALAQKITPYTGSSNLFVVPYTK--PQEYIRDNAPDVLFTVLMRRSMM-RIANR 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G ++ G + T++A++ + + PL+ + K E
Sbjct: 276 IATRQGCEALITGESLAQVAS------QTVKALQ---CTDAAQDLPILRPLIGMDKTEII 326
Query: 182 KLAQDIGGQDLVNLILEES 200
+ ++ IG + L E+
Sbjct: 327 ETSRHIGTYETSILPYEDC 345
>gi|146280749|ref|YP_001170902.1| thiamine biosynthesis protein ThiI [Pseudomonas stutzeri A1501]
gi|145568954|gb|ABP78060.1| thiamine biosynthesis protein ThiI [Pseudomonas stutzeri A1501]
Length = 519
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 57/183 (31%), Gaps = 29/183 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL WK
Sbjct: 218 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAH-ELGVMEVAHY-------LWKKYG 269
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L + +A RL I +
Sbjct: 270 SSHRVLFISVPFEEVVGEILQKVDNSQMG------VVLKR--MMLRASTEIAERLHIDAL 321
Query: 132 VIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
V G + + P + + + V PL+ K + A IG
Sbjct: 322 VTGEAISQVSSQTLP-----------NLSVIDSATDMLVLRPLIARHKQDIIDTAFQIGT 370
Query: 190 QDL 192
+
Sbjct: 371 AEF 373
>gi|39934381|ref|NP_946657.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
CGA009]
gi|39648230|emb|CAE26749.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopseudomonas palustris CGA009]
Length = 401
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C + I + +
Sbjct: 19 RVVVAMSGGVDSSATAALLKAQGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARAVAE 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R++ F AT A
Sbjct: 79 RIGIPHYVLD---YESRFRESVIDSFADSYASGETP---VPCIECNRSVKFRDLLAT-AR 131
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT-VHTPLMWLKK 177
LG + + G D + A + + + + PL + K
Sbjct: 132 ELGASALATG-HYVSSRRLDDGSRALVCAADRDRDQSYFLFATTREQLQFLRFPLGDMTK 190
Query: 178 YETWKLAQDIG 188
+T +LA+ G
Sbjct: 191 PQTRELARQFG 201
>gi|297581279|ref|ZP_06943203.1| thiamin biosynthesis protein ThiI [Vibrio cholerae RC385]
gi|297534595|gb|EFH73432.1| thiamin biosynthesis protein ThiI [Vibrio cholerae RC385]
Length = 515
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 205 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 258
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 259 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 308
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 309 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 359
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 360 AREIGTEDF 368
>gi|255744685|ref|ZP_05418636.1| thiamine biosynthesis protein ThiI [Vibrio cholera CIRS 101]
gi|255737716|gb|EET93110.1| thiamine biosynthesis protein ThiI [Vibrio cholera CIRS 101]
Length = 471
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 161 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 214
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 215 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 264
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 265 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 315
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 316 AREIGTEDF 324
>gi|229525510|ref|ZP_04414915.1| thiamine biosynthesis protein ThiI [Vibrio cholerae bv. albensis
VL426]
gi|229339091|gb|EEO04108.1| thiamine biosynthesis protein ThiI [Vibrio cholerae bv. albensis
VL426]
Length = 483
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|229530003|ref|ZP_04419393.1| thiamine biosynthesis protein ThiI [Vibrio cholerae 12129(1)]
gi|229333777|gb|EEN99263.1| thiamine biosynthesis protein ThiI [Vibrio cholerae 12129(1)]
gi|327483631|gb|AEA78038.1| Thiamine biosynthesis protein thiI [Vibrio cholerae LMA3894-4]
Length = 483
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|170751444|ref|YP_001757704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium radiotolerans JCM 2831]
gi|205816882|sp|B1LV15|MNMA_METRJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|170657966|gb|ACB27021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacterium radiotolerans JCM 2831]
Length = 384
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 61/197 (30%), Gaps = 32/197 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKRQGFDVVGVTLQLYDHGAASHRKGACCAGQDIHDARAAAE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D + + A P N V R+++ L
Sbjct: 74 HLGIPHYVLD---YEDRFRDEVIEKFAESYLAGETPIPCVECNRTVKFRDLL------GL 124
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------P 171
A L + G + RA+ A++ + ++ P
Sbjct: 125 ARDLDADALATGHYVASRAL-----PGGGRALHRALDPARDQSYFLYATTAEQLDFLRFP 179
Query: 172 LMWLKKYETWKLAQDIG 188
L ++K ET LA+++G
Sbjct: 180 LGEMEKTETRALAKELG 196
>gi|254285567|ref|ZP_04960531.1| thiamin biosynthesis protein ThiI [Vibrio cholerae AM-19226]
gi|150424429|gb|EDN16366.1| thiamin biosynthesis protein ThiI [Vibrio cholerae AM-19226]
Length = 515
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 205 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 258
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 259 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 308
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 309 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 359
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 360 AREIGTEDF 368
>gi|153827042|ref|ZP_01979709.1| thiamin biosynthesis protein ThiI [Vibrio cholerae MZO-2]
gi|149739083|gb|EDM53379.1| thiamin biosynthesis protein ThiI [Vibrio cholerae MZO-2]
Length = 515
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 205 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 258
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 259 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 308
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 309 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 359
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 360 AREIGTEDF 368
>gi|254225119|ref|ZP_04918733.1| thiamin biosynthesis protein ThiI [Vibrio cholerae V51]
gi|125622506|gb|EAZ50826.1| thiamin biosynthesis protein ThiI [Vibrio cholerae V51]
Length = 515
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 205 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 258
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 259 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 308
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 309 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 359
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 360 AREIGTEDF 368
>gi|153802280|ref|ZP_01956866.1| thiamin biosynthesis protein ThiI [Vibrio cholerae MZO-3]
gi|124122162|gb|EAY40905.1| thiamin biosynthesis protein ThiI [Vibrio cholerae MZO-3]
Length = 515
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 205 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 258
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 259 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 308
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 309 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 359
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 360 AREIGTEDF 368
>gi|153215993|ref|ZP_01950215.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
cholerae 1587]
gi|229513006|ref|ZP_04402472.1| thiamine biosynthesis protein ThiI [Vibrio cholerae TMA 21]
gi|124114506|gb|EAY33326.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
cholerae 1587]
gi|229349899|gb|EEO14853.1| thiamine biosynthesis protein ThiI [Vibrio cholerae TMA 21]
Length = 483
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|121588123|ref|ZP_01677870.1| thiamin biosynthesis protein ThiI [Vibrio cholerae 2740-80]
gi|121728347|ref|ZP_01681377.1| thiamin biosynthesis protein ThiI [Vibrio cholerae V52]
gi|147673207|ref|YP_001216372.1| thiamine biosynthesis protein ThiI [Vibrio cholerae O395]
gi|153817197|ref|ZP_01969864.1| thiamin biosynthesis protein ThiI [Vibrio cholerae NCTC 8457]
gi|227081070|ref|YP_002809621.1| thiamin biosynthesis protein ThiI [Vibrio cholerae M66-2]
gi|298498984|ref|ZP_07008791.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MAK 757]
gi|121547614|gb|EAX57713.1| thiamin biosynthesis protein ThiI [Vibrio cholerae 2740-80]
gi|121629402|gb|EAX61832.1| thiamin biosynthesis protein ThiI [Vibrio cholerae V52]
gi|126512231|gb|EAZ74825.1| thiamin biosynthesis protein ThiI [Vibrio cholerae NCTC 8457]
gi|146315090|gb|ABQ19629.1| thiamin biosynthesis protein ThiI [Vibrio cholerae O395]
gi|227008958|gb|ACP05170.1| thiamin biosynthesis protein ThiI [Vibrio cholerae M66-2]
gi|227012714|gb|ACP08924.1| thiamin biosynthesis protein ThiI [Vibrio cholerae O395]
gi|297543317|gb|EFH79367.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MAK 757]
Length = 515
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 205 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 258
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 259 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 308
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 309 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 359
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 360 AREIGTEDF 368
>gi|229505500|ref|ZP_04395010.1| thiamine biosynthesis protein ThiI [Vibrio cholerae BX 330286]
gi|262168685|ref|ZP_06036380.1| thiamine biosynthesis protein ThiI [Vibrio cholerae RC27]
gi|229357723|gb|EEO22640.1| thiamine biosynthesis protein ThiI [Vibrio cholerae BX 330286]
gi|262022803|gb|EEY41509.1| thiamine biosynthesis protein ThiI [Vibrio cholerae RC27]
Length = 483
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|15640910|ref|NP_230541.1| thiamine biosynthesis protein ThiI [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|153823689|ref|ZP_01976356.1| thiamin biosynthesis protein ThiI [Vibrio cholerae B33]
gi|254848029|ref|ZP_05237379.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MO10]
gi|9655349|gb|AAF94056.1| thiamin biosynthesis protein ThiI [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|126518792|gb|EAZ76015.1| thiamin biosynthesis protein ThiI [Vibrio cholerae B33]
gi|254843734|gb|EET22148.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MO10]
Length = 515
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 205 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 258
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 259 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 308
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 309 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 359
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 360 AREIGTEDF 368
>gi|229510830|ref|ZP_04400309.1| thiamine biosynthesis protein ThiI [Vibrio cholerae B33]
gi|229517951|ref|ZP_04407395.1| thiamine biosynthesis protein ThiI [Vibrio cholerae RC9]
gi|229523308|ref|ZP_04412715.1| thiamine biosynthesis protein ThiI [Vibrio cholerae TM 11079-80]
gi|229608519|ref|YP_002879167.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MJ-1236]
gi|262161182|ref|ZP_06030293.1| thiamine biosynthesis protein ThiI [Vibrio cholerae INDRE 91/1]
gi|262191488|ref|ZP_06049673.1| thiamine biosynthesis protein ThiI [Vibrio cholerae CT 5369-93]
gi|22002002|sp|Q9KTK8|THII_VIBCH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|229339671|gb|EEO04686.1| thiamine biosynthesis protein ThiI [Vibrio cholerae TM 11079-80]
gi|229344666|gb|EEO09640.1| thiamine biosynthesis protein ThiI [Vibrio cholerae RC9]
gi|229350795|gb|EEO15736.1| thiamine biosynthesis protein ThiI [Vibrio cholerae B33]
gi|229371174|gb|ACQ61597.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MJ-1236]
gi|262028932|gb|EEY47585.1| thiamine biosynthesis protein ThiI [Vibrio cholerae INDRE 91/1]
gi|262032636|gb|EEY51189.1| thiamine biosynthesis protein ThiI [Vibrio cholerae CT 5369-93]
Length = 483
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFAPVVA------EILEKIDDGQMG--VVLKR--MFMRTAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|313501021|gb|ADR62387.1| ThiI [Pseudomonas putida BIRD-1]
Length = 484
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 29/183 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL WK
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAH-ELGVMEVAHY-------LWKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + V L + L AA +A RL I +
Sbjct: 235 SSQRVLFISVPFEEVVGEILNKVDNSYMGVTLKR--------MMLRGAAHMADRLQIDAL 286
Query: 132 VIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
V G + + P + + V PL+ K + A +IG
Sbjct: 287 VTGEAISQVSSQTLP-----------NLSIIDSATDKLVLRPLLASHKQDIIDQATEIGT 335
Query: 190 QDL 192
D
Sbjct: 336 ADF 338
>gi|163843840|ref|YP_001628244.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella suis ATCC 23445]
gi|189036219|sp|B0CI68|MNMA_BRUSI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|163674563|gb|ABY38674.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella suis ATCC 23445]
Length = 398
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 15/188 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y V C + I + +
Sbjct: 16 RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHSAAVHRAGSCCAGQDIEDARRVSE 75
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 76 SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132
Query: 129 TNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
+ G + Y R ++ + PL L K +
Sbjct: 133 DALATGHYIRSRANGAHRALY---RPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQV 189
Query: 181 WKLAQDIG 188
++A+++G
Sbjct: 190 REIAEELG 197
>gi|327479017|gb|AEA82327.1| thiamine biosynthesis protein ThiI [Pseudomonas stutzeri DSM 4166]
Length = 484
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 57/183 (31%), Gaps = 29/183 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL WK
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAH-ELGVMEVAHY-------LWKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + + V V R + L + +A RL I +
Sbjct: 235 SSHRVLFISVPFEEVVGEILQKVDNSQMG------VVLKR--MMLRASTEIAERLHIDAL 286
Query: 132 VIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
V G + + P + + + V PL+ K + A IG
Sbjct: 287 VTGEAISQVSSQTLP-----------NLSVIDSATDMLVLRPLIASHKQDIIDTAFQIGT 335
Query: 190 QDL 192
+
Sbjct: 336 AEF 338
>gi|20089138|ref|NP_615213.1| hypothetical protein MA0240 [Methanosarcina acetivorans C2A]
gi|19914006|gb|AAM03693.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 281
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 36/181 (19%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
IK SA++ FSGG DSST + A + ++ ++ D L R+++
Sbjct: 11 KAIKARESAVIAFSGGVDSSTLAALAFEELGEKALAVTID----------SPLFPRQQLE 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + ILP ++ S+ T N + L
Sbjct: 61 TAAQTACEIGIQHKILPFSLTSVPYFSANTINRCYFCKKA-------------LLETLVE 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYE 179
A + G ++ G ++ G + R RAIE A + +P + + K E
Sbjct: 108 FAEKAGYNVVLEGTNASEIKG--ENRPGY-RAIEEA-------GDKIFSPFVEFNVTKEE 157
Query: 180 T 180
Sbjct: 158 I 158
>gi|26991721|ref|NP_747146.1| thiamine biosynthesis protein ThiI [Pseudomonas putida KT2440]
gi|148550121|ref|YP_001270223.1| thiamine biosynthesis protein ThiI [Pseudomonas putida F1]
gi|37999608|sp|Q88CY4|THII_PSEPK RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|24986825|gb|AAN70610.1|AE016704_1 thiamine biosynthesis protein ThiI [Pseudomonas putida KT2440]
gi|148514179|gb|ABQ81039.1| thiamine biosynthesis/tRNA modification protein ThiI [Pseudomonas
putida F1]
Length = 484
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 29/183 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL WK
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAH-ELGVMEVAHY-------LWKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + V L + L AA +A RL I +
Sbjct: 235 SSQRVLFISVPFEEVVGEILNKVDNSYMGVTLKR--------MMLRGAAHMADRLQIDAL 286
Query: 132 VIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
V G + + P + + V PL+ K + A +IG
Sbjct: 287 VTGEAISQVSSQTLP-----------NLSIIDSATDKLVLRPLLASHKQDIIDQATEIGT 335
Query: 190 QDL 192
D
Sbjct: 336 ADF 338
>gi|205822121|sp|Q6NA79|MNMA_RHOPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 397
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C + I + +
Sbjct: 15 RVVVAMSGGVDSSATAALLKAQGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARAVAE 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R++ F AT A
Sbjct: 75 RIGIPHYVLD---YESRFRESVIDSFADSYASGETP---VPCIECNRSVKFRDLLAT-AR 127
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT-VHTPLMWLKK 177
LG + + G D + A + + + + PL + K
Sbjct: 128 ELGASALATG-HYVSSRRLDDGSRALVCAADRDRDQSYFLFATTREQLQFLRFPLGDMTK 186
Query: 178 YETWKLAQDIG 188
+T +LA+ G
Sbjct: 187 PQTRELARQFG 197
>gi|192289904|ref|YP_001990509.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
TIE-1]
gi|192283653|gb|ACF00034.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopseudomonas palustris TIE-1]
Length = 401
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C + I + +
Sbjct: 19 RVVVAMSGGVDSSATAALLKAQGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARAVAE 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R++ F AT A
Sbjct: 79 RIGIPHYVLD---YESRFRESVIDSFADSYASGETP---VPCIECNRSVKFRDLLAT-AR 131
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT-VHTPLMWLKK 177
LG + + G D + A + + + + PL + K
Sbjct: 132 ELGASALATG-HYVSSRRLDDGSRALVCAADRDRDQSYFLFATTREQLQFLRFPLGDMTK 190
Query: 178 YETWKLAQDIG 188
+T +LA+ G
Sbjct: 191 PQTRELARQFG 201
>gi|170719605|ref|YP_001747293.1| thiamine biosynthesis protein ThiI [Pseudomonas putida W619]
gi|169757608|gb|ACA70924.1| thiamine biosynthesis/tRNA modification protein ThiI [Pseudomonas
putida W619]
Length = 484
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 29/183 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL WK
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAH-ELGVMEVAHY-------LWKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + V L + L AA +A RL I +
Sbjct: 235 SSQRVLFISVPFEEVVGEILNKVDNSYMGVTLKR--------MMLRGAARMADRLEIDAL 286
Query: 132 VIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
V G + + P + + V PL+ K + A +IG
Sbjct: 287 VTGEAISQVSSQTLP-----------NLSIIDSATDKLVLRPLLASHKQDIIDQATEIGT 335
Query: 190 QDL 192
D
Sbjct: 336 ADF 338
>gi|325271122|ref|ZP_08137683.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas sp. TJI-51]
gi|324103751|gb|EGC01037.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas sp. TJI-51]
Length = 484
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 29/183 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL WK
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAH-ELGVMEVAHY-------LWKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + V L + L AA +A RL I +
Sbjct: 235 SSQRVLFISVPFEEVVGEILNKVDNSYMGVTLKR--------MMLRGAAHMADRLQIDAL 286
Query: 132 VIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
V G + + P + + V PL+ K + A +IG
Sbjct: 287 VTGEAISQVSSQTLP-----------NLSIIDSATDKLVLRPLLATHKQDIIDQATEIGT 335
Query: 190 QDL 192
D
Sbjct: 336 ADF 338
>gi|170104908|ref|XP_001883667.1| argininosuccinate synthase [Laccaria bicolor S238N-H82]
gi|164641302|gb|EDR05563.1| argininosuccinate synthase [Laccaria bicolor S238N-H82]
Length = 417
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 13/131 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +K LL +SGG D+S L+W +++ V D GQ E + +K +
Sbjct: 1 MSEKLGRVLLAYSGGLDTSCILAWLIEQGYEVYAFMADVGQ----EEDFAAAEKKALAVG 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K+ + + + I + +++ +NV + P V R +I +A
Sbjct: 57 AKKFFLADLKREFVTELIYPAVQANAIYENVYLLGTSLARP---VIARGMI------AIA 107
Query: 124 YRLGITNIVIG 134
+ G + G
Sbjct: 108 DQEGCDFVSHG 118
>gi|167972831|ref|ZP_02555108.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 5 str. ATCC 27817]
gi|167973688|ref|ZP_02555965.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 11 str. ATCC 33695]
gi|167975847|ref|ZP_02558124.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 12 str. ATCC 33696]
gi|167987875|ref|ZP_02569546.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 7 str. ATCC 27819]
gi|168362962|ref|ZP_02696136.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 13 str. ATCC 33698]
gi|195867835|ref|ZP_03079835.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 9 str. ATCC 33175]
gi|198273832|ref|ZP_03206366.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 4 str. ATCC 27816]
gi|209554375|ref|YP_002284855.1| thiamine biosynthesis protein ThiI [Ureaplasma urealyticum serovar
10 str. ATCC 33699]
gi|225550847|ref|ZP_03771796.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 2 str. ATCC 27814]
gi|225551110|ref|ZP_03772056.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 8 str. ATCC 27618]
gi|226729111|sp|B5ZBR5|THII_UREU1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|171903050|gb|EDT49339.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 13 str. ATCC 33698]
gi|184209214|gb|EDU06257.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 5 str. ATCC 27817]
gi|188019084|gb|EDU57124.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 7 str. ATCC 27819]
gi|188998032|gb|EDU67129.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 11 str. ATCC 33695]
gi|195660119|gb|EDX53499.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 12 str. ATCC 33696]
gi|195660532|gb|EDX53789.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 9 str. ATCC 33175]
gi|198249587|gb|EDY74369.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 4 str. ATCC 27816]
gi|209541876|gb|ACI60105.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 10 str. ATCC 33699]
gi|225378925|gb|EEH01290.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 8 str. ATCC 27618]
gi|225380001|gb|EEH02363.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
urealyticum serovar 2 str. ATCC 27814]
Length = 392
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 28/196 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
AL+L SGG DS + R V+ ++F + L+ + + K+I K
Sbjct: 176 KALVLLSGGIDSPVASRLIMKRGISVDFITFITPPHTSQKALDKTIALAKQITLNNHLTK 235
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L + + + + I + T R F+ A LA +
Sbjct: 236 ANLY------------VCNFTKLQEEIAHISKESYRITL--MR-RYFMRIAKRLAIDIKA 280
Query: 129 TNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G S T+ +++T ++ + V PL+ K E LA+
Sbjct: 281 GALVTGEALGQVAS-------QTLNSMQTISSVLND--FLVLRPLITYDKQEIISLAKQF 331
Query: 188 GGQDLVNLILEESHTC 203
+L L ++ +C
Sbjct: 332 NTYELSILPYDD--SC 345
>gi|254775201|ref|ZP_05216717.1| thiamine biosynthesis protein ThiI [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 409
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 59/193 (30%), Gaps = 25/193 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A++L SGG DS A+ R + L C +
Sbjct: 178 PVGSSGRAVVLLSGGFDSPVAAYRAMRRGLACDFLH---------------CTGAPFTDA 222
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+K + + +++ + V R ++L A LA
Sbjct: 223 SSTYKAYALVRQLTRFQPRSRLYVAAVGRAQRTLAASGAGEAQIVAQR-RLYLRLACGLA 281
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+G +V G D G + + + + V P++ K E
Sbjct: 282 ERIGAQAVVTG----DSLG-----QVASQTLPNLAATEQAATLPVLRPMLGFDKQEILAE 332
Query: 184 AQDIGGQDLVNLI 196
A+ IG ++ L
Sbjct: 333 ARRIGTAEIAMLP 345
>gi|146342725|ref|YP_001207773.1| tRNA-specific 2-thiouridylase MnmA [Bradyrhizobium sp. ORS278]
gi|205811327|sp|A4Z082|MNMA_BRASO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|146195531|emb|CAL79558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bradyrhizobium sp. ORS278]
Length = 397
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 57/193 (29%), Gaps = 28/193 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + C + I + +
Sbjct: 15 RVVVAMSGGVDSSVTAALLKSQGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAE 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L D S+ N A P VP R I A
Sbjct: 75 RLGIPHYVLD---YEDRFRESVIDNFAASYASGETP---VPCIECNR-AIKFGDLLKTAR 127
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PLM 173
LG + + G PD RA+ A + + + PL
Sbjct: 128 ELGASVLATG-HYVASRRLPDGS----RALTCAADADRDQSYFLFATTREQLDYLRFPLG 182
Query: 174 WLKKYETWKLAQD 186
+ K E +LA+
Sbjct: 183 DMTKPEVRELARR 195
>gi|154151581|ref|YP_001405199.1| thiamine biosynthesis/tRNA modification protein ThiI [Candidatus
Methanoregula boonei 6A8]
gi|154000133|gb|ABS56556.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanoregula
boonei 6A8]
Length = 370
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 68/180 (37%), Gaps = 22/180 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L SGG DS + R ++ + Y E L +++VE++ +++ L
Sbjct: 172 VALVSGGIDSPVATYMMMKRGCKIVPI---YVALETFLDETVLARAERVVEILRQYQPDL 228
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
L ++ D ++ + + Q+ F R A +A +G I
Sbjct: 229 K------LRVIHDSYLAAAKEELIRNHQEKYT-CLFCKRR---MYRIAQAVAQEVGAKGI 278
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G + + ++ + L + + V+ PL+ K + LA++IG +
Sbjct: 279 VNGESLGQVAS---------QTLDNLVVLSDVAEIPVYRPLIGFDKADAIALAREIGTFE 329
>gi|149373068|ref|ZP_01891973.1| argininosuccinate synthetase [unidentified eubacterium SCB49]
gi|149354295|gb|EDM42863.1| argininosuccinate synthetase [unidentified eubacterium SCB49]
Length = 397
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 31/140 (22%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K + ++ +SGG D+S C V +S + G + E++ K+
Sbjct: 1 MKNSKKLVIAYSGGLDTSYCAVSLAKEGYDVHAVSVNTGGFTQKEIKTIEENAYKMGVST 60
Query: 65 PKWKDSLGE--DHILPLAILGD--------ISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
K D++ ++ I G+ +S S+ A++I +
Sbjct: 61 YKNIDAIATFYQKVVKYLIFGNVLKNNTYPLSVSAERIIQAIEIIE-------------- 106
Query: 115 FLVFAATLAYRLGITNIVIG 134
A +G I G
Sbjct: 107 -------YAKSIGAEYIAHG 119
>gi|308801591|ref|XP_003078109.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
gi|116056560|emb|CAL52849.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
Length = 1313
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
M + + + + + + SGG DS + V TL DY R + E
Sbjct: 852 MRESMHEFGNTIAVSLSGGVDSMVLAYILKHQGYDVVTLHIDYKNRPESTEEA 904
>gi|254719618|ref|ZP_05181429.1| tRNA-specific 2-thiouridylase MnmA [Brucella sp. 83/13]
gi|265984628|ref|ZP_06097363.1| tRNA-specific 2-thiouridylase mnmA [Brucella sp. 83/13]
gi|306837544|ref|ZP_07470417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella sp. NF 2653]
gi|264663220|gb|EEZ33481.1| tRNA-specific 2-thiouridylase mnmA [Brucella sp. 83/13]
gi|306407370|gb|EFM63576.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella sp. NF 2653]
Length = 398
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 15/188 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS V ++ C + +E + +
Sbjct: 16 RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
SLG H +L ++ A P V + A LG
Sbjct: 76 SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQAARDLGA 132
Query: 129 TNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
+ G + Y R ++ + PL L K +
Sbjct: 133 DALATGHYIRSRANGAHRALY---RPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQV 189
Query: 181 WKLAQDIG 188
++A+++G
Sbjct: 190 REIAEELG 197
>gi|167835516|ref|ZP_02462399.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
thailandensis MSMB43]
Length = 510
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 34/93 (36%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLQLAHRHHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
++I G+ + + + N
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSTIAHFGYYIAN 325
>gi|332798405|ref|YP_004459904.1| tRNA-specific 2-thiouridylase mnmA [Tepidanaerobacter sp. Re1]
gi|332696140|gb|AEE90597.1| tRNA-specific 2-thiouridylase mnmA [Tepidanaerobacter sp. Re1]
Length = 366
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIV 61
+ K A+ SGG DSS C ++ V ++ FD R KVE + C + +
Sbjct: 1 MNKNKVAVA-MSGGVDSSVCAYLLKEQGYEVIGITMQIFDDAPR-KVEAKEGGCSSEAVQ 58
Query: 62 ELMPKWKDSLGEDHILPL 79
+ + +++ L
Sbjct: 59 DARLVAEKLGIPHYVVNL 76
>gi|293400752|ref|ZP_06644897.1| thiamine biosynthesis/tRNA modification protein ThiI
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305778|gb|EFE47022.1| thiamine biosynthesis/tRNA modification protein ThiI
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 405
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 37/197 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL++ SGG DS + R +E + + + K++EL
Sbjct: 183 KALVMLSGGIDSPVACYMTMKRGVAIECIHY------ASPPYTSQAAQDKVLELARAIAP 236
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G HI+P L + + ++ A+ I + A +A +
Sbjct: 237 YQGHIRLHIIPFTDLQLAIYKNCDESYAITIMRR------------MMYRIAERVAQKQN 284
Query: 128 ITNIV----IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
IV IG + + +E+ + + + V P+ L K E +
Sbjct: 285 CLAIVNGESIGQVAS-------------QTLESMQTINCVTDMPVIRPVACLDKLEIIDI 331
Query: 184 AQDIGGQDLVNLILEES 200
+Q IG D+ E+
Sbjct: 332 SQKIGTYDISIQPFEDC 348
>gi|313114973|ref|ZP_07800467.1| thiamine biosynthesis/tRNA modification protein ThiI
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310622703|gb|EFQ06164.1| thiamine biosynthesis/tRNA modification protein ThiI
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 399
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + AL + SGG DS R ++ + F + K+ L
Sbjct: 174 PVGTSGRALNMLSGGIDSPVAAYRMAKRGLALDHIHF------ASPPYTSERAKLKVKAL 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAAT 121
G ++ + + +N P+ V R + A
Sbjct: 228 AQLTSIYTGSSNLFVVPYTK-----------PQEYIRDNAPDVLFTVLMRRSMM-RIANV 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + G +V G + T++A++ + + PL+ + K E
Sbjct: 276 IAKKQGCEALVTGESLAQVAS------QTVKALQ---CTDAAQDLPILRPLIGMDKTEIV 326
Query: 182 KLAQDIGGQDLVNLILEES 200
+ A+ I + L E+
Sbjct: 327 ETARHINTFETSILPYEDC 345
>gi|295101486|emb|CBK99031.1| thiazole biosynthesis/tRNA modification protein ThiI
[Faecalibacterium prausnitzii L2-6]
Length = 399
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL + SGG DS R ++ + F + K+ L
Sbjct: 180 RALNMLSGGIDSPVAAYRMAKRGLGLDHIHF------ASPPYTSERAKLKVKALAQLITP 233
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYRLG 127
G ++ + + +N P+ V R + A +A + G
Sbjct: 234 YTGSTNLFVVPYTK-----------PQEYIRDNAPDVLFTVLMRRSMM-RIANIIARKQG 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G + T++A++ + + PL+ + K E + A+ I
Sbjct: 282 CEALVTGESLAQVAS------QTVKALQ---CTDAAQDLPILRPLIGMDKTEIVETARHI 332
Query: 188 GGQDLVNLILEES 200
+ L E+
Sbjct: 333 NTFETSILPYEDC 345
>gi|167749693|ref|ZP_02421820.1| hypothetical protein EUBSIR_00651 [Eubacterium siraeum DSM 15702]
gi|167657316|gb|EDS01446.1| hypothetical protein EUBSIR_00651 [Eubacterium siraeum DSM 15702]
gi|291529825|emb|CBK95410.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
siraeum 70/3]
gi|291556460|emb|CBL33577.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
siraeum V10Sc8a]
Length = 396
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + ALLL SGG DS R V+ + F E L + + E
Sbjct: 173 PVGSSGKALLLLSGGIDSPVAGYMMAKRGLIVDGIHFVSPPYTS---ERALMKVETLCEK 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + + I + + + + ++ + + A +A
Sbjct: 230 LTSYCGDIRFYCVPFTEIQEALRDNCPEEFFTIIMRR-------------LMVKIANIIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R +V G + T++AI+ + V P++ + K E +
Sbjct: 277 ERNEYGALVTGESVGQVAS------QTLKAIQ---CTDAAAEYPVFRPVIGMDKKEIIDI 327
Query: 184 AQDIGGQDLVNLILEES 200
A+ I + L E+
Sbjct: 328 ARKIDTFETSTLPYEDC 344
>gi|14590117|ref|NP_142181.1| NAD synthetase [Pyrococcus horikoshii OT3]
gi|6093470|sp|O57921|NADE_PYRHO RecName: Full=Probable NH(3)-dependent NAD(+) synthetase
gi|146386765|pdb|2E18|A Chain A, Crystal Structure Of Project Ph0182 From Pyrococcus
Horikoshii Ot3
gi|146386766|pdb|2E18|B Chain B, Crystal Structure Of Project Ph0182 From Pyrococcus
Horikoshii Ot3
gi|3256568|dbj|BAA29251.1| 257aa long hypothetical NH(3)-dependent NAD(+) synthetase
[Pyrococcus horikoshii OT3]
Length = 257
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 71/193 (36%), Gaps = 38/193 (19%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
I +K + +++ SGG DS+T A ++V L Y + VE K +
Sbjct: 17 IREKGNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFENKDVE------DAKLV 70
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
E + + I+ S +N+ + + L N R +I L
Sbjct: 71 AEKLGIGYKVINIKPIVD----------SFVENLELNLDRKGLGNIMSRTR-MIML---- 115
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A+ + IV+G R + + T G + + P++ L K E
Sbjct: 116 -YAHANSLGRIVLGTS---------NRSEFLTGYFTKWGDG----ASDYAPIINLYKTEV 161
Query: 181 WKLAQDIGGQDLV 193
W++A+ IG + +
Sbjct: 162 WEIAKRIGVPERI 174
>gi|319898474|ref|YP_004158567.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella clarridgeiae 73]
gi|319402438|emb|CBI75979.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella clarridgeiae 73]
Length = 409
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 34/129 (26%), Gaps = 4/129 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS V ++ Y C + I +
Sbjct: 13 ENSRIVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGAATHRVGACCAGQDIEDARR 72
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +IL + ++ A P V + AY
Sbjct: 73 VAETLGVPHYILD---YEERFREAVINPFAESYAHGETPVPCVSCNQTVKFADLLATAYE 129
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 130 LGADALATG 138
>gi|312877398|ref|ZP_07737363.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor lactoaceticus 6A]
gi|311795872|gb|EFR12236.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor lactoaceticus 6A]
Length = 360
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ SGG DSS + + V + Q + E E L +R+K +
Sbjct: 1 MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATM---QIWQTETEDEL-IREKSCCSLTA 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP----GRNI---IFLVF 118
D+ HIL + K V D + T P R I +FL
Sbjct: 57 VDDARRVAHILDIPYYVFNMKDDFKKEVINYFVDEYIKGRTPNPCIMCNRKIKFELFLK- 115
Query: 119 AATLAYRLGITNIVIG 134
A LG+ I G
Sbjct: 116 ---KAMVLGMDYIATG 128
>gi|85057857|ref|YP_456773.1| thiamine biosynthesis protein ThiI [Aster yellows witches'-broom
phytoplasma AYWB]
gi|84789962|gb|ABC65694.1| thiamine biosynthesis protein ThiI [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 434
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 23/201 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+L SGG DS A+ + VE L F+ LE V L +
Sbjct: 191 VLMSGGIDSPVAAYLAMRKGITVELLHFE--SSPLTPLESIQKVIDLAKVLSRYAFGNQI 248
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ H++P + ++ + + I + A+ A + ++
Sbjct: 249 KLHLVPFRYFQEKITKTVLDSYIINIMRR------------MMYRLASQFACQKNHLCLI 296
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + T+ +++T + +++T+ PL+ + K E K+A+ I D+
Sbjct: 297 NGESVGQVAS------QTLESMQTITQV---TNMTILRPLVTMDKNEIIKIAKQIDTFDI 347
Query: 193 VNLILEESHTCYLGKRDKRYE 213
+ T YL +
Sbjct: 348 SIRAFHDCCTLYLPQNPATKP 368
>gi|325281886|ref|YP_004254428.1| tRNA-specific 2-thiouridylase mnmA [Odoribacter splanchnicus DSM
20712]
gi|324313695|gb|ADY34248.1| tRNA-specific 2-thiouridylase mnmA [Odoribacter splanchnicus DSM
20712]
Length = 364
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIVEL 63
+ L+ SGG DS+ L++ + + +FD R +E E C + E
Sbjct: 2 EKKRVLMAMSGGIDSTVAAMLLLEQGYELVGVTYRTFDNISRGCMEKEKGCCSVDSLFEA 61
Query: 64 MPKWKDSLGEDHILPL 79
++ E HIL +
Sbjct: 62 KRMAQELGFEHHILDI 77
>gi|312793905|ref|YP_004026828.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181045|gb|ADQ41215.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 360
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ SGG DSS + + V + Q + E E L +R+K +
Sbjct: 1 MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATM---QIWQTETEDEL-IREKSCCSLTA 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP----GRNI---IFLVF 118
D+ HIL + K V D + T P R I +FL
Sbjct: 57 VDDARRVAHILDIPYYVFNMKDDFKKEVINYFVDEYIKGRTPNPCIMCNRKIKFELFLK- 115
Query: 119 AATLAYRLGITNIVIG 134
A LG+ I G
Sbjct: 116 ---KAMVLGMDYIATG 128
>gi|317054842|ref|YP_004103309.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
albus 7]
gi|315447111|gb|ADU20675.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
albus 7]
Length = 392
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 26/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+LL SGG DS R VE + F+ + + + +L
Sbjct: 174 PVGSSGRAMLLLSGGIDSPVAGYMMARRGAVVEAIHFEAPPYTS---DRARMKVETLAKL 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
M + + + I + + + + ++ + + A +
Sbjct: 231 MTAYCGDVKFFCVPFTEIQELLRDNCPEELFTILMRR-------------LMMEIAQRIC 277
Query: 124 YRLG-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+ G I +V G + + + + + V P + + K E +
Sbjct: 278 EKDGDIQALVTGESLGQVAS---------QTMYAMVCTDAACRMPVFRPCIGMDKSEIVE 328
Query: 183 LAQDIGGQDLVNLILEES 200
+A+ IG + L E+
Sbjct: 329 IARKIGTFETSILPYEDC 346
>gi|312622080|ref|YP_004023693.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor kronotskyensis 2002]
gi|312202547|gb|ADQ45874.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor kronotskyensis 2002]
Length = 360
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ SGG DSS + + V + Q + E E L +R+K +
Sbjct: 1 MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATM---QIWQTETEDEL-IREKSCCSLTA 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP----GRNI---IFLVF 118
D+ HIL + K V D + T P R I +FL
Sbjct: 57 VDDARRVAHILDIPYYVFNMKDDFKKEVINYFVDEYIKGRTPNPCIMCNRKIKFELFLK- 115
Query: 119 AATLAYRLGITNIVIG 134
A LG+ I G
Sbjct: 116 ---KAMVLGMDYIATG 128
>gi|18310394|ref|NP_562328.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens str. 13]
gi|20140598|sp|Q8XKI3|THII_CLOPE RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|18145074|dbj|BAB81118.1| probable thiamin biosynthesis protein [Clostridium perfringens str.
13]
Length = 385
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +++ SGG DS R + Y + E K++ +++ +
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCV---YYHSHPYTSERAKDKVKELAKIVGR 229
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I DI + + ++ + A L+ +
Sbjct: 230 YTEKITLYVVPFTEIQMDIIEKCREDELTIIMRR-------------FMMRVACELSEKK 276
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +I G + + +E I S V PL+ + K + +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLIVSNDASDRPVFRPLIAMDKEDIMDIARD 327
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 328 IDTYETSILPYEDC 341
>gi|288561273|ref|YP_003424759.1| argininosuccinate synthase ArgG [Methanobrevibacter ruminantium M1]
gi|288543983|gb|ADC47867.1| argininosuccinate synthase ArgG [Methanobrevibacter ruminantium M1]
Length = 391
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 61/203 (30%), Gaps = 47/203 (23%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L FSGG D++ C+ + + V T D GQ + ELE I
Sbjct: 2 EKVVLAFSGGLDTTVCVKLLEEEYNYEVVTACVDVGQ-PQEELEKSQNSADNI------- 53
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT------ 121
+ G+ +I+ + + + + + + P L A
Sbjct: 54 --NAGKHYIIDAKD--EFAEEYIARGIKANAEYEGYP-----------LSTALARPLIAM 98
Query: 122 ----LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWL 175
+A + G T I G C + S V P+ M L
Sbjct: 99 KIIEVAEKEGATAIAHG-----------CTGKGNDQFRFEAIIRSMSDFKVIAPIREMNL 147
Query: 176 KKYETWKLAQDIGGQDLVNLILE 198
+ E A++ G + I
Sbjct: 148 TRTEEQAYAKEHGLNLSYDKIYS 170
>gi|254172406|ref|ZP_04879081.1| thiamine biosynthesis protein ThiI [Thermococcus sp. AM4]
gi|214033335|gb|EEB74162.1| thiamine biosynthesis protein ThiI [Thermococcus sp. AM4]
Length = 197
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 29/180 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMPKW 67
A+ L S G DS + L + V + F Q + E + V ++ +L
Sbjct: 2 KAVTLLSSGIDSPVAIYLMLRKDVEVVPVHFR--QDSIKEEKVHELWEVLRRYGKLDELI 59
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E+H+ L ++ T + L A + + +G
Sbjct: 60 VVDFAEEHVPVFERLKELKKERWTCVFCK----------------WLMLRRACRIGHEVG 103
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ I+ G D G + ++ + + S + V PL+ L K E +A++I
Sbjct: 104 ASTIITG----DSLG-----QVASQTLDNLLIVSRASDLPVLRPLIGLDKEEIVWIAKEI 154
>gi|86160461|ref|YP_467246.1| thiamine biosynthesis protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776972|gb|ABC83809.1| thiamine biosynthesis protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 351
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+KK A+ L SGG DS+ L+ + V+ ++F Y E + R R +
Sbjct: 1 MKKQGKAIALISGGLDSTLALALVRGQGIEVKAVNF-YTGFCITETQRRKGGRPD-GTVP 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
D + + + V + N V R + + A +
Sbjct: 59 QNEALRAAADLEVDIEYVDISGPGYFDMLVNPRWGYGANANPCVDCR-VFMMRKAKEIME 117
Query: 125 RLGITNIVIG 134
G I G
Sbjct: 118 AEGADFIFTG 127
>gi|300863447|ref|ZP_07108402.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300338510|emb|CBN53544.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 484
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/238 (15%), Positives = 72/238 (30%), Gaps = 50/238 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L+SGG D+ L L + + F G N V + V KK+ + P
Sbjct: 157 VALWSGGLDALAGLYTRLQMYPEKSFVLFGTGSSNTV-YARQERVAKKVQSIFPGRCHLF 215
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY------- 124
+ + + S R ++F + A AY
Sbjct: 216 RVPIRFHDSDVQQKNKCSR-------------------ARGVVFTLLGAACAYLMEQRIL 256
Query: 125 ---RLGITNIVI----GVCETDYSGYPDCR---HDTIRAIETAINLGMESHVTVHTPLMW 174
GI I + D+S R T+ + ++ + V P ++
Sbjct: 257 CVYENGIGAINLPYRASAVGLDHS-----RSVHPLTLLMVGDVVSELLGEEFCVQNPFLF 311
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K + + + + +L + +C + C C +C LR++
Sbjct: 312 WTKAQ---MCKALAKDRRHDLP-SLTMSC----DSPHRQRPVQCGYCSSCLLRRQALA 361
>gi|18976558|ref|NP_577915.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
DSM 3638]
gi|18892117|gb|AAL80310.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
3638]
Length = 275
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
+ +++ + A++ +SGG+DS+ L A + +D VE + D + + KK
Sbjct: 46 LEELLSQVDKAIVAYSGGKDSTVALYLAKEEYDIDVEAVMVD----HGFMAPQAIENAKK 101
Query: 60 IVELMPKWKDSLGEDH 75
+ E + + ED+
Sbjct: 102 VSEYLNVPLTIIREDY 117
>gi|256846579|ref|ZP_05552036.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2]
gi|294784166|ref|ZP_06749467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_27]
gi|256718348|gb|EEU31904.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2]
gi|294488236|gb|EFG35581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_27]
Length = 343
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 76/249 (30%), Gaps = 62/249 (24%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELMP 65
++ SGG DSS ++ V ++ + Q N ++E V K+
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLN--QHLEENSKDIEDAKKVCNKLGISHE 59
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++I+ L +SS I D+ + +A +
Sbjct: 60 VINIRKDFENIVIKYFLD--GYSSGITPSPCVICDDEIK-----------FKILFDIADK 106
Query: 126 LGITNIVIG-VCETDYSGYPDCRHDTIRAIETAIN------------LGMESHVTVHTPL 172
+ G +YS + + +++ + + + PL
Sbjct: 107 YKAEYVATGHYTSVEYS------EIFSKYLLKSVHSIIKDQSYMLYRISPDKLERLIFPL 160
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K+E ++A IG + Y K + C A ++G+
Sbjct: 161 KPYTKHEIREIALKIGLEV------------YDKKDSQ--------GVCFA----KEGYK 196
Query: 233 EF-KEKYQD 240
EF KE +D
Sbjct: 197 EFLKENLKD 205
>gi|271964263|ref|YP_003338459.1| thiamine biosynthesis protein ThiI [Streptosporangium roseum DSM
43021]
gi|270507438|gb|ACZ85716.1| thiamine biosynthesis protein ThiI [Streptosporangium roseum DSM
43021]
Length = 400
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 63/191 (32%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L SGG DS + R RV+ L F E + +V + +++
Sbjct: 190 RGLVLMSGGIDSPVAAYRMMRRGLRVDFLHFSGIPFTTSE---SIYKAYALVRALDRFQG 246
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
++P +S +A+ Q + L A +A RL
Sbjct: 247 R-SRLWVVPFGKAQQSIKASGQDRLAVISQRR------------LMLKTAEEVARRLRAG 293
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G S + ++ + + PL+ L K E A+ IG
Sbjct: 294 ALITGDSLGQVSS---------QTLQNITAQDDAVDLPILRPLIGLDKTEIMAEARRIGT 344
Query: 190 QDLVNLILEES 200
++ L E+
Sbjct: 345 LEISELPDEDC 355
>gi|330813834|ref|YP_004358073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486929|gb|AEA81334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Pelagibacter sp. IMCC9063]
Length = 379
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 20/134 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DSST ++ V ++ +DYG+ K C C K I +
Sbjct: 25 KVVVAMSGGVDSSTVAGLLKEQNYHVIGITLQLYDYGKIGKTSGTC--CAGKDIYDAKRV 82
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAA 120
+ E H+ + + + A P N V R+ +F
Sbjct: 83 SEQLNIEHHVFN---YESLFKEEVIEKFADSYLKGETPIPCVSCNQTVKFRD-LFKS--- 135
Query: 121 TLAYRLGITNIVIG 134
A +LG +V G
Sbjct: 136 --AKKLGADALVTG 147
>gi|306844591|ref|ZP_07477178.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Brucella sp. BO1]
gi|306275035|gb|EFM56798.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Brucella sp. BO1]
Length = 398
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 15/188 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS V ++ C + +E + +
Sbjct: 16 RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
SLG H +L ++ A P V + A LG
Sbjct: 76 SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132
Query: 129 TNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
+ G + Y R ++ + PL L K +
Sbjct: 133 DALATGHYIRSRANGAHRALY---RPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQV 189
Query: 181 WKLAQDIG 188
++A+++G
Sbjct: 190 REIAEELG 197
>gi|161619531|ref|YP_001593418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella canis ATCC 23365]
gi|260565920|ref|ZP_05836390.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 4 str. 40]
gi|189036218|sp|A9M700|MNMA_BRUC2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|161336342|gb|ABX62647.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella canis ATCC 23365]
gi|260155438|gb|EEW90518.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 4 str. 40]
Length = 398
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 15/188 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS V ++ C + +E + +
Sbjct: 16 RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
SLG H +L ++ A P V + A LG
Sbjct: 76 SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132
Query: 129 TNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
+ G + Y R ++ + PL L K +
Sbjct: 133 DALATGHYIRSRANGAHRALY---RPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQV 189
Query: 181 WKLAQDIG 188
++A+++G
Sbjct: 190 REIAEELG 197
>gi|256810712|ref|YP_003128081.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanocaldococcus fervens AG86]
gi|256793912|gb|ACV24581.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanocaldococcus fervens AG86]
Length = 373
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 31/186 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L L S G DS + R R L + E L ++I E++ +
Sbjct: 182 RVLCLVSDGIDSPVAAFMMIRRGCRDVLL-------HLKMSEEGLNKARRIAEVLSDYDT 234
Query: 70 SLGE---DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L D+ + + + S +N L A A L
Sbjct: 235 ELEFVVYDYTNDIKDIVEKLKSIKKENYTCIFCKRR------------MLKVAEKYAKYL 282
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
IV G + + ++ + + + PL+ L K + ++A++
Sbjct: 283 DCDAIVTGDNLGQVAS---------QTLKNLRVISEGINYPILRPLIGLDKNDIVEIAKE 333
Query: 187 IGGQDL 192
IG ++
Sbjct: 334 IGTYEI 339
>gi|167036086|ref|YP_001671317.1| thiamine biosynthesis protein ThiI [Pseudomonas putida GB-1]
gi|166862574|gb|ABZ00982.1| thiamine biosynthesis/tRNA modification protein ThiI [Pseudomonas
putida GB-1]
Length = 484
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 29/183 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+L SGG DS+ + R F+ G R EL WK
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAH-ELGVMEVAHY-------LWKKYG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+L +++ + + V L + L AA +A RL I +
Sbjct: 235 SSQRVLFISVPFEEVVGEILNKVDNSYMGVTLKR--------MMLRGAAHMADRLEIDAL 286
Query: 132 VIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
V G + + P + + V PL+ K + A +IG
Sbjct: 287 VTGEAISQVSSQTLP-----------NLSIIDSATDKLVLRPLLASHKQDIIDQANEIGT 335
Query: 190 QDL 192
D
Sbjct: 336 ADF 338
>gi|116493041|ref|YP_804776.1| thiamine biosynthesis protein ThiI [Pediococcus pentosaceus ATCC
25745]
gi|122265495|sp|Q03EN8|THII_PEDPA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|116103191|gb|ABJ68334.1| Thiamine biosynthesis ATP pyrophosphatase [Pediococcus pentosaceus
ATCC 25745]
Length = 405
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +++ SGG DS + R +E + F E L K++
Sbjct: 173 PVGTAGKGMMMLSGGIDSPVAGYLGMKRGVEMEMVHFFSPPYTS---EQALAKAKELSGK 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S+ + P + + + M IQ + L LA
Sbjct: 230 LAAYSGSVQFIQV-PFTEIQETIKEKCPEGYLMTIQRR------------MMLRLVVALA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G I G + + +E+ + + + + + P++ + K E +
Sbjct: 277 KQRGGLAIFNGESLGQVAS---------QTMESMLAINDVTTMPIIRPVVSMDKNEIIDI 327
Query: 184 AQDIGGQDLVNLILEES 200
A+DI DL + E+
Sbjct: 328 AKDIDTYDLSIMPFEDC 344
>gi|23502454|ref|NP_698581.1| tRNA-specific 2-thiouridylase MnmA [Brucella suis 1330]
gi|62290471|ref|YP_222264.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 1 str.
9-941]
gi|82700395|ref|YP_414969.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis biovar
Abortus 2308]
gi|148559837|ref|YP_001259458.1| tRNA-specific 2-thiouridylase MnmA [Brucella ovis ATCC 25840]
gi|189024699|ref|YP_001935467.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus S19]
gi|225628026|ref|ZP_03786062.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella ceti str. Cudo]
gi|225853065|ref|YP_002733298.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis ATCC 23457]
gi|237815980|ref|ZP_04594977.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella abortus str. 2308 A]
gi|254689772|ref|ZP_05153026.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 6 str.
870]
gi|254694261|ref|ZP_05156089.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 3 str.
Tulya]
gi|254697916|ref|ZP_05159744.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 2 str.
86/8/59]
gi|254702309|ref|ZP_05164137.1| tRNA-specific 2-thiouridylase MnmA [Brucella suis bv. 5 str. 513]
gi|254704837|ref|ZP_05166665.1| tRNA-specific 2-thiouridylase MnmA [Brucella suis bv. 3 str. 686]
gi|254708251|ref|ZP_05170079.1| tRNA-specific 2-thiouridylase MnmA [Brucella pinnipedialis
M163/99/10]
gi|254710623|ref|ZP_05172434.1| tRNA-specific 2-thiouridylase MnmA [Brucella pinnipedialis B2/94]
gi|254714807|ref|ZP_05176618.1| tRNA-specific 2-thiouridylase MnmA [Brucella ceti M644/93/1]
gi|254717867|ref|ZP_05179678.1| tRNA-specific 2-thiouridylase MnmA [Brucella ceti M13/05/1]
gi|254730806|ref|ZP_05189384.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 4 str.
292]
gi|256032116|ref|ZP_05445730.1| tRNA-specific 2-thiouridylase MnmA [Brucella pinnipedialis
M292/94/1]
gi|256061638|ref|ZP_05451777.1| tRNA-specific 2-thiouridylase MnmA [Brucella neotomae 5K33]
gi|256114160|ref|ZP_05454914.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis bv. 3 str.
Ether]
gi|256160312|ref|ZP_05458006.1| tRNA-specific 2-thiouridylase MnmA [Brucella ceti M490/95/1]
gi|256255517|ref|ZP_05461053.1| tRNA-specific 2-thiouridylase MnmA [Brucella ceti B1/94]
gi|256258024|ref|ZP_05463560.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 9 str.
C68]
gi|256263452|ref|ZP_05465984.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 2 str.
63/9]
gi|256370004|ref|YP_003107515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella microti CCM 4915]
gi|260169251|ref|ZP_05756062.1| tRNA-specific 2-thiouridylase MnmA [Brucella sp. F5/99]
gi|260547004|ref|ZP_05822743.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus NCTC 8038]
gi|260755305|ref|ZP_05867653.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 6 str.
870]
gi|260758526|ref|ZP_05870874.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 4 str.
292]
gi|260762350|ref|ZP_05874693.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 2 str.
86/8/59]
gi|260884320|ref|ZP_05895934.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 9 str.
C68]
gi|261214569|ref|ZP_05928850.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 3 str.
Tulya]
gi|261219714|ref|ZP_05933995.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M13/05/1]
gi|261222726|ref|ZP_05937007.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti B1/94]
gi|261315753|ref|ZP_05954950.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis
M163/99/10]
gi|261318196|ref|ZP_05957393.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis B2/94]
gi|261322603|ref|ZP_05961800.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M644/93/1]
gi|261325648|ref|ZP_05964845.1| tRNA-specific 2-thiouridylase mnmA [Brucella neotomae 5K33]
gi|261752876|ref|ZP_05996585.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 5 str. 513]
gi|261755533|ref|ZP_05999242.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 3 str. 686]
gi|261758765|ref|ZP_06002474.1| tRNA-specific 2-thiouridylase mnmA [Brucella sp. F5/99]
gi|265989227|ref|ZP_06101784.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis
M292/94/1]
gi|265995479|ref|ZP_06108036.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 3 str.
Ether]
gi|265998689|ref|ZP_06111246.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M490/95/1]
gi|294852904|ref|ZP_06793577.1| tRNA methyl transferase [Brucella sp. NVSL 07-0026]
gi|297248856|ref|ZP_06932574.1| tRNA methyl transferase [Brucella abortus bv. 5 str. B3196]
gi|306843064|ref|ZP_07475687.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Brucella sp. BO2]
gi|38258585|sp|Q8CY38|MNMA_BRUSU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|71658011|sp|Q57BT1|MNMA_BRUAB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|123547133|sp|Q2YQB2|MNMA_BRUA2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|166234846|sp|A5VRW1|MNMA_BRUO2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|229486334|sp|B2S746|MNMA_BRUA1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|254811446|sp|C0REM2|MNMA_BRUMB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|23348445|gb|AAN30496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella suis 1330]
gi|62196603|gb|AAX74903.1| TrmU, tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella abortus bv. 1 str. 9-941]
gi|82616496|emb|CAJ11563.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella melitensis biovar Abortus 2308]
gi|148371094|gb|ABQ61073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella ovis ATCC 25840]
gi|189020271|gb|ACD72993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella abortus S19]
gi|225617189|gb|EEH14235.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella ceti str. Cudo]
gi|225641430|gb|ACO01344.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella melitensis ATCC 23457]
gi|237789278|gb|EEP63489.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella abortus str. 2308 A]
gi|256000167|gb|ACU48566.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella microti CCM 4915]
gi|260096054|gb|EEW79931.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus NCTC 8038]
gi|260668844|gb|EEX55784.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 4 str.
292]
gi|260672782|gb|EEX59603.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 2 str.
86/8/59]
gi|260675413|gb|EEX62234.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 6 str.
870]
gi|260873848|gb|EEX80917.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 9 str.
C68]
gi|260916176|gb|EEX83037.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 3 str.
Tulya]
gi|260921310|gb|EEX87963.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti B1/94]
gi|260924803|gb|EEX91371.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M13/05/1]
gi|261295293|gb|EEX98789.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M644/93/1]
gi|261297419|gb|EEY00916.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis B2/94]
gi|261301628|gb|EEY05125.1| tRNA-specific 2-thiouridylase mnmA [Brucella neotomae 5K33]
gi|261304779|gb|EEY08276.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis
M163/99/10]
gi|261738749|gb|EEY26745.1| tRNA-specific 2-thiouridylase mnmA [Brucella sp. F5/99]
gi|261742629|gb|EEY30555.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 5 str. 513]
gi|261745286|gb|EEY33212.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 3 str. 686]
gi|262553313|gb|EEZ09147.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M490/95/1]
gi|262766592|gb|EEZ12381.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 3 str.
Ether]
gi|263093459|gb|EEZ17509.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 2 str.
63/9]
gi|264661424|gb|EEZ31685.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis
M292/94/1]
gi|294821493|gb|EFG38492.1| tRNA methyl transferase [Brucella sp. NVSL 07-0026]
gi|297176025|gb|EFH35372.1| tRNA methyl transferase [Brucella abortus bv. 5 str. B3196]
gi|306286743|gb|EFM58293.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Brucella sp. BO2]
gi|326409608|gb|ADZ66673.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella melitensis M28]
gi|326539311|gb|ADZ87526.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brucella melitensis M5-90]
Length = 398
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 15/188 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS V ++ C + +E + +
Sbjct: 16 RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
SLG H +L ++ A P V + A LG
Sbjct: 76 SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132
Query: 129 TNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
+ G + Y R ++ + PL L K +
Sbjct: 133 DALATGHYIRSRANGAHRALY---RPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQV 189
Query: 181 WKLAQDIG 188
++A+++G
Sbjct: 190 REIAEELG 197
>gi|14521954|ref|NP_127431.1| hypothetical protein PAB1152 [Pyrococcus abyssi GE5]
gi|5459174|emb|CAB50660.1| Predicted ATPase of the PP-loop superfamily [Pyrococcus abyssi GE5]
Length = 274
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
+ +I++K A++ +SGG+DS+ L A ++ VE + D+G +E + +
Sbjct: 45 LEEILRKVDKAIVAYSGGKDSTVALYLAKVKYGIDVEAVMVDHGFMASQAIENAKRIAEH 104
Query: 60 I 60
+
Sbjct: 105 L 105
>gi|262165144|ref|ZP_06032881.1| thiamine biosynthesis protein ThiI [Vibrio mimicus VM223]
gi|262024860|gb|EEY43528.1| thiamine biosynthesis protein ThiI [Vibrio mimicus VM223]
Length = 471
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 161 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 214
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 215 LWQKYGSSAKVRFIAIDFEPVVA------EILEKIDDGQMG--VVLKR--MFMRAAGMVA 264
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 265 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 315
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 316 AREIGTEDF 324
>gi|262172093|ref|ZP_06039771.1| thiamine biosynthesis protein ThiI [Vibrio mimicus MB-451]
gi|261893169|gb|EEY39155.1| thiamine biosynthesis protein ThiI [Vibrio mimicus MB-451]
Length = 483
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFEPVVA------EILEKIDDGQMG--VVLKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|261212056|ref|ZP_05926342.1| thiamine biosynthesis protein ThiI [Vibrio sp. RC341]
gi|260838664|gb|EEX65315.1| thiamine biosynthesis protein ThiI [Vibrio sp. RC341]
Length = 483
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFEPVVA------EILEKIDDGQMG--VVLKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|258621629|ref|ZP_05716661.1| thiamin biosynthesis protein ThiI [Vibrio mimicus VM573]
gi|258586101|gb|EEW10818.1| thiamin biosynthesis protein ThiI [Vibrio mimicus VM573]
Length = 483
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFEPVVA------EILEKIDDGQMG--VVLKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|258624380|ref|ZP_05719328.1| thiamin biosynthesis protein ThiI [Vibrio mimicus VM603]
gi|258583342|gb|EEW08143.1| thiamin biosynthesis protein ThiI [Vibrio mimicus VM603]
Length = 483
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFEPVVA------EILEKIDDGQMG--VVLKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|168307721|ref|ZP_02690396.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
parvum serovar 1 str. ATCC 27813]
gi|171902822|gb|EDT49111.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
parvum serovar 1 str. ATCC 27813]
Length = 390
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 28/196 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
AL+L SGG DS + R ++ ++F + L+ + + K+I K
Sbjct: 176 KALVLLSGGIDSPVASRLIMKRGISIDFITFITPPHTSQKALDKTIALAKQITLDNKLTK 235
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L + + + ++ I + T R F+ A LA +
Sbjct: 236 ANLY------------VCNFTKLQDEIAHISKESYRITL--MR-RYFMRIAKRLAISVKA 280
Query: 129 TNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G S T+ +++T ++ + V PL+ K E LA+
Sbjct: 281 NALVTGEALGQVAS-------QTLNSMQTISSVLD--NFLVLRPLIAYDKEEIISLAKRF 331
Query: 188 GGQDLVNLILEESHTC 203
+L L ++ +C
Sbjct: 332 NTYELSILPYDD--SC 345
>gi|167971591|ref|ZP_02553868.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
parvum serovar 6 str. ATCC 27818]
gi|186700977|gb|EDU19259.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
parvum serovar 6 str. ATCC 27818]
Length = 390
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 28/196 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
AL+L SGG DS + R ++ ++F + L+ + + K+I K
Sbjct: 176 KALVLLSGGIDSPVASRLIMKRGISIDFITFITPPHTSQKALDKTIALAKQITLDNKLTK 235
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L + + + ++ I + T R F+ A LA +
Sbjct: 236 ANLY------------VCNFTKLQDEIAHISKESYRITL--MR-RYFMRIAKRLAISVKA 280
Query: 129 TNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G S T+ +++T ++ + V PL+ K E LA+
Sbjct: 281 NALVTGEALGQVAS-------QTLNSMQTISSVLD--NFLVLRPLIAYDKEEIISLAKRF 331
Query: 188 GGQDLVNLILEESHTC 203
+L L ++ +C
Sbjct: 332 NTYELSILPYDD--SC 345
>gi|13357980|ref|NP_078254.1| thiamin biosynthesis protein [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168281575|ref|ZP_02689242.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
parvum serovar 14 str. ATCC 33697]
gi|170762337|ref|YP_001752502.1| thiamine biosynthesis protein ThiI [Ureaplasma parvum serovar 3
str. ATCC 27815]
gi|20140892|sp|Q9PQ71|THII_UREPA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|189030670|sp|B1AJ58|THII_UREP2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|11278781|pir||C82892 thiamin biosynthesis protein UU418 [imported] - Ureaplasma
urealyticum
gi|6899407|gb|AAF30829.1|AE002139_2 thiamin biosynthesis protein [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827914|gb|ACA33176.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
parvum serovar 3 str. ATCC 27815]
gi|182675968|gb|EDT87873.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
parvum serovar 14 str. ATCC 33697]
Length = 390
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 28/196 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
AL+L SGG DS + R ++ ++F + L+ + + K+I K
Sbjct: 176 KALVLLSGGIDSPVASRLIMKRGISIDFITFITPPHTSQKALDKTIALAKQITLDNKLTK 235
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L + + + ++ I + T R F+ A LA +
Sbjct: 236 ANLY------------VCNFTKLQDEIAHISKESYRITL--MR-RYFMRIAKRLAISVKA 280
Query: 129 TNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G S T+ +++T ++ + V PL+ K E LA+
Sbjct: 281 NALVTGEALGQVAS-------QTLNSMQTISSVLD--NFLVLRPLIAYDKEEIISLAKRF 331
Query: 188 GGQDLVNLILEESHTC 203
+L L ++ +C
Sbjct: 332 NTYELSILPYDD--SC 345
>gi|326800569|ref|YP_004318388.1| tRNA-specific 2-thiouridylase mnmA [Sphingobacterium sp. 21]
gi|326551333|gb|ADZ79718.1| tRNA-specific 2-thiouridylase mnmA [Sphingobacterium sp. 21]
Length = 362
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 59/200 (29%), Gaps = 14/200 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V L+ DY E C I
Sbjct: 1 MSKHGRILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYASSGGSTKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPL-AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ +IL + GD ++ + PN V I
Sbjct: 61 DARALAVGYGFPHYILDIRDEFGDFVINNFVD----EYLAGRTPNPCVLCNTHIKWEALL 116
Query: 121 TLAYRLGITNIVIGVCE----TDYSGY--PDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A +L I G D Y R + + ++ PL
Sbjct: 117 KRADKLDCEFIATGHYANIRLQDSGRYVISKGRDEHKDQSYVLWGVSQKNLARTKFPLGS 176
Query: 175 LKKYETWKLAQDIGGQDLVN 194
K E ++A ++G +L N
Sbjct: 177 FTKAEIRQMALEMGQVELAN 196
>gi|114332031|ref|YP_748253.1| argininosuccinate synthase [Nitrosomonas eutropha C91]
gi|122313270|sp|Q0AEE4|ASSY_NITEC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|114309045|gb|ABI60288.1| argininosuccinate synthase [Nitrosomonas eutropha C91]
Length = 404
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K A+L FSGG D+S L W D + V T + D GQ ++E ++ I E+
Sbjct: 1 MDKVKKAVLAFSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEIEPARAKALQFGIKEI 60
Query: 64 M-PKWKDSLGEDHILPL 79
++ D++ P+
Sbjct: 61 FIEDLREEFVRDYVFPM 77
>gi|330816384|ref|YP_004360089.1| hypothetical protein bgla_1g14630 [Burkholderia gladioli BSR3]
gi|327368777|gb|AEA60133.1| hypothetical protein bgla_1g14630 [Burkholderia gladioli BSR3]
Length = 467
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 3/95 (3%)
Query: 146 CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYL 205
C + + V + P ++ K + + D G L + S +C
Sbjct: 268 CYPGFTTKLSRFLEALTGKRVQFYHPALFQTKGQVLQALVDAGEDVRDVLRMHRSCSC-D 326
Query: 206 GKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ + Y C C C LR+ E + D
Sbjct: 327 ARLASLSKQLYHCGVCGNCLLRRTA--EHAVRVSD 359
>gi|302871531|ref|YP_003840167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor obsidiansis OB47]
gi|302574390|gb|ADL42181.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor obsidiansis OB47]
Length = 360
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ SGG DSS + + V + Q + E E L +R+K +
Sbjct: 1 MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATM---QIWQTETEDEL-IREKSCCSLTA 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP----GRNI---IFLVF 118
D+ HIL + K V D + T P R I +FL
Sbjct: 57 VDDARRVAHILDIPYYVFNMKEDFKKEVINYFIDEYIKGRTPNPCIMCNRKIKFELFLK- 115
Query: 119 AATLAYRLGITNIVIG 134
A LG+ I G
Sbjct: 116 ---RAMVLGMDYIATG 128
>gi|299822741|ref|ZP_07054627.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
grayi DSM 20601]
gi|299816270|gb|EFI83508.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
grayi DSM 20601]
Length = 402
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+L+ SGG DS A+ R VE + F + ++K V+L
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGVDVEAVHF-----HSPPYTSEK-AKQKAVDLAATLSK 232
Query: 70 SLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G+ H++P + + + ++V M + + L + +
Sbjct: 233 YGGDVRMHVVPFTEIQETIKQQIPESVIMTVTRR------------MMLRITDQIRQKEQ 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
I+ G + + +E+ + + + P++ + K E ++A+ I
Sbjct: 281 GLAIINGESLGQVAS---------QTLESMTAINAVTATPIIRPVVTMDKNEIIQIAKQI 331
Query: 188 GGQDLVNLILEES 200
DL E+
Sbjct: 332 DTYDLSVQPFEDC 344
>gi|66768749|ref|YP_243511.1| hypothetical protein XC_2441 [Xanthomonas campestris pv. campestris
str. 8004]
gi|66574081|gb|AAY49491.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 428
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 87/257 (33%), Gaps = 65/257 (25%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ + ++ L SGG DS + R +S
Sbjct: 135 ELFRPTEDSVCLLSGGMDSLIGAIDLAESGRRSIAVS---------------NTVPGDGH 179
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF---- 118
+ +++G H+ ++H++ + + R+IIFL F
Sbjct: 180 NQHSFAEAVGFKHL-------PLNHNASPPSDGSREPSQR-------ARSIIFLAFGVLA 225
Query: 119 AATL-AYRLGITN-IVI-----------------GVCETDYSGYPDCRHDTIRAIETAIN 159
A +L AY+ G + I G T + + + +++ ++
Sbjct: 226 ATSLQAYQDGAQVPLFICENGFIALNPPLTGTRLGSLSTRTAH-----PEFLHGVQSVLD 280
Query: 160 LGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
V + P K E ++++ QDL+ + S +C R +RY + C
Sbjct: 281 AA-GLRVNLINPYQHKTKGE---MSRECADQDLLRNLAASSVSC---GRYRRYGYNQ-CG 332
Query: 220 SCPACYLRQKGWMEFKE 236
C C +R+ ++ + +
Sbjct: 333 RCIPCQIRRSAYLAWGQ 349
>gi|126440112|ref|YP_001057771.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 668]
gi|126219605|gb|ABN83111.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 668]
Length = 510
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++I G+ + A+ + N + L A G I
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIA-------NKLGLKVALC---GEGSDEIF 342
Query: 133 IG 134
G
Sbjct: 343 GG 344
>gi|17986711|ref|NP_539345.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis bv. 1 str.
16M]
gi|256045209|ref|ZP_05448107.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis bv. 1 str.
Rev.1]
gi|260565193|ref|ZP_05835677.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 1 str.
16M]
gi|265991642|ref|ZP_06104199.1| tRNA methyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|24638318|sp|Q8YIL6|MNMA_BRUME RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|17982334|gb|AAL51609.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Brucella melitensis bv. 1 str. 16M]
gi|260151261|gb|EEW86355.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 1 str.
16M]
gi|263002426|gb|EEZ15001.1| tRNA methyltransferase [Brucella melitensis bv. 1 str. Rev.1]
Length = 398
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 15/188 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS V ++ C + +E + +
Sbjct: 16 RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
SLG H +L ++ A P V + A LG
Sbjct: 76 SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132
Query: 129 TNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
+ G + Y R ++ + PL L K +
Sbjct: 133 DALATGHYIRSRANGAHRALY---RPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQV 189
Query: 181 WKLAQDIG 188
++A+++G
Sbjct: 190 REIAEELG 197
>gi|311031309|ref|ZP_07709399.1| thiamine biosynthesis protein ThiI [Bacillus sp. m3-13]
Length = 402
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 71/190 (37%), Gaps = 27/190 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+L+ SGG DS A+ R R+E + F ++K+VEL + D
Sbjct: 181 VLMLSGGIDSPVAGYLAMKRGIRLEVVHFF------SPPYTSERAKQKVVELTERLTDFG 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLGITN 130
H + L I+ + + + ++ +N + +T R L A + +
Sbjct: 235 ---HSINLHIVPF---TDIQVAIQKQVPENYTMTST----R-RFMLKIADKICEKEQGLA 283
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
I+ G + + +++ + + + PL+ + K E +A+ I
Sbjct: 284 IITGESLGQVAS---------QTLQSMSTINEVTSTPIIRPLITMDKIEIMDIAKHIDTL 334
Query: 191 DLVNLILEES 200
++ N E+
Sbjct: 335 EISNRPYEDC 344
>gi|15901606|ref|NP_346210.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae TIGR4]
gi|168493693|ref|ZP_02717836.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC3059-06]
gi|81620365|sp|Q97P67|QUEF_STRPN RecName: Full=NADPH-dependent 7-cyano-7-deazaguanine reductase;
AltName: Full=7-cyano-7-carbaguanine reductase; AltName:
Full=NADPH-dependent nitrile oxidoreductase; AltName:
Full=PreQ(0) reductase
gi|14973274|gb|AAK75850.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
gi|183576455|gb|EDT96983.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
nitrile oxidoreductase) [Streptococcus pneumoniae
CDC3059-06]
Length = 154
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 29 LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHS 88
+ ++ VE ++F YGQR+ +E++ + K + HIL +++LG I+
Sbjct: 1 MQHYETVEAVTFAYGQRHHLEIQITREIAK----------EQGIRHHILDMSLLGQITAQ 50
Query: 89 SLTKNVAMKIQDNNL 103
+ + + L
Sbjct: 51 PDFATIHISYIPDKL 65
>gi|53718325|ref|YP_107311.1| putative asparagine synthetase B [Burkholderia pseudomallei K96243]
gi|76811014|ref|YP_332313.1| asparagine synthase [Burkholderia pseudomallei 1710b]
gi|126453540|ref|YP_001065015.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 1106a]
gi|134279525|ref|ZP_01766237.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 305]
gi|167718192|ref|ZP_02401428.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei DM98]
gi|167822831|ref|ZP_02454302.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 9]
gi|167844405|ref|ZP_02469913.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei B7210]
gi|217419807|ref|ZP_03451313.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 576]
gi|226196677|ref|ZP_03792257.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei Pakistan 9]
gi|242317405|ref|ZP_04816421.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 1106b]
gi|254187663|ref|ZP_04894175.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei Pasteur 52237]
gi|254258801|ref|ZP_04949855.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 1710a]
gi|52208739|emb|CAH34675.1| putative asparagine synthetase B [glutamine-hydrolyzing]
[Burkholderia pseudomallei K96243]
gi|76580467|gb|ABA49942.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 1710b]
gi|126227182|gb|ABN90722.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 1106a]
gi|134248725|gb|EBA48807.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 305]
gi|157935343|gb|EDO91013.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei Pasteur 52237]
gi|217397111|gb|EEC37127.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 576]
gi|225931208|gb|EEH27215.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei Pakistan 9]
gi|242140644|gb|EES27046.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 1106b]
gi|254217490|gb|EET06874.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 1710a]
Length = 510
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++I G+ + A+ + N + L A G I
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIA-------NKLGLKVALC---GEGSDEIF 342
Query: 133 IG 134
G
Sbjct: 343 GG 344
>gi|167892919|ref|ZP_02480321.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 7894]
gi|167917649|ref|ZP_02504740.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei BCC215]
Length = 510
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++I G+ + A+ + N + L A G I
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIA-------NKLGLKVALC---GEGSDEIF 342
Query: 133 IG 134
G
Sbjct: 343 GG 344
>gi|222081493|ref|YP_002540856.1| hypothetical protein Arad_7847 [Agrobacterium radiobacter K84]
gi|221726172|gb|ACM29261.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 457
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 28/145 (19%)
Query: 115 FLVFAATLAYRLGITNIVI-----GV-----CETDYSGYPDCR--HDTIRAIETAINLGM 162
F + + AY LG +IV+ G +T + GY D R +E +
Sbjct: 217 FTLLSGIAAYLLGTHDIVMPESGQGALGPSLVQTSH-GYEDYRNHPLFFGRMERLVAAIF 275
Query: 163 ESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI---LEESHTCYLGKRDKRYEWGY-GC 218
V+ P +W K +T +G + + ++ +C+ R+ + C
Sbjct: 276 NYQVSYRLPRLWKTKGQT------LGEFAALPVNPNEWVKTRSCWQQNRNSSVDGKRRQC 329
Query: 219 NSCPACYLRQ-----KGWMEFKEKY 238
C AC LR+ G E KE Y
Sbjct: 330 GICAACMLRRLSFHAAGLEEPKENY 354
>gi|167814354|ref|ZP_02446034.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 91]
Length = 510
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++I G+ + A+ + N + L A G I
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIA-------NKLGLKVALC---GEGSDEIF 342
Query: 133 IG 134
G
Sbjct: 343 GG 344
>gi|53724688|ref|YP_102067.1| asparagine synthase [Burkholderia mallei ATCC 23344]
gi|67641475|ref|ZP_00440253.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia mallei
GB8 horse 4]
gi|121598552|ref|YP_994008.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei SAVP1]
gi|167003918|ref|ZP_02269697.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei PRL-20]
gi|254177034|ref|ZP_04883691.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei ATCC 10399]
gi|254203751|ref|ZP_04910111.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei FMH]
gi|254208727|ref|ZP_04915075.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei JHU]
gi|52428111|gb|AAU48704.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia mallei
ATCC 23344]
gi|121227362|gb|ABM49880.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei SAVP1]
gi|147745263|gb|EDK52343.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei FMH]
gi|147750603|gb|EDK57672.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei JHU]
gi|160698075|gb|EDP88045.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei ATCC 10399]
gi|238522416|gb|EEP85860.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia mallei
GB8 horse 4]
gi|243060645|gb|EES42831.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei PRL-20]
Length = 510
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++I G+ + A+ + N + L A G I
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIA-------NKLGLKVALC---GEGSDEIF 342
Query: 133 IG 134
G
Sbjct: 343 GG 344
>gi|254181731|ref|ZP_04888328.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 1655]
gi|184212269|gb|EDU09312.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 1655]
Length = 510
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++I G+ + A+ + N + L A G I
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIA-------NKLGLKVALC---GEGSDEIF 342
Query: 133 IG 134
G
Sbjct: 343 GG 344
>gi|167901404|ref|ZP_02488609.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei NCTC 13177]
Length = 510
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++I G+ + A+ + N + L A G I
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIA-------NKLGLKVALC---GEGSDEIF 342
Query: 133 IG 134
G
Sbjct: 343 GG 344
>gi|124385910|ref|YP_001028328.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei NCTC 10229]
gi|126448747|ref|YP_001081972.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei NCTC 10247]
gi|237810923|ref|YP_002895374.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei MSHR346]
gi|254360221|ref|ZP_04976491.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei 2002721280]
gi|124293930|gb|ABN03199.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei NCTC 10229]
gi|126241617|gb|ABO04710.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei NCTC 10247]
gi|148029461|gb|EDK87366.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
mallei 2002721280]
gi|237506369|gb|ACQ98687.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei MSHR346]
Length = 510
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
++I G+ + A+ + N + L A G I
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIA-------NKLGLKVALC---GEGSDEIF 342
Query: 133 IG 134
G
Sbjct: 343 GG 344
>gi|313674593|ref|YP_004052589.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Marivirga tractuosa DSM 4126]
gi|312941291|gb|ADR20481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Marivirga tractuosa DSM 4126]
Length = 378
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 66/206 (32%), Gaps = 27/206 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V ++ DY + E C I
Sbjct: 1 MSKKGRVLVAMSGGIDSSLAAVLLHEQGYEVIGMTMKTWDYASSGSSKKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + +IL + GD T + PN V I
Sbjct: 61 DARNLAVNLGFPHYILDIREEFGDYVIDHFTD----EYLAGRTPNPCVLCNTHIKWDSLL 116
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD---TI----RAIETAINLGM-----ESHVTV 168
A +LG I G Y R + I + + + + ES
Sbjct: 117 RRADKLGCDYIATGH-------YAKVREENGRYIISRGKDLNKDQSYALWGVSQESLSRT 169
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVN 194
PL L K E K+A+D G +LVN
Sbjct: 170 ILPLGDLTKPEIRKMAEDKGFYELVN 195
>gi|262402757|ref|ZP_06079318.1| thiamine biosynthesis protein ThiI [Vibrio sp. RC586]
gi|262351539|gb|EEZ00672.1| thiamine biosynthesis protein ThiI [Vibrio sp. RC586]
Length = 483
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K+
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWQKYGSSAKVRFIAIDFEPVVA------EILEKIDDGQMG--VVLKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKDDIIRL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|313669371|ref|YP_004049798.1| hypothetical protein Sulku_2590 [Sulfuricurvum kujiense DSM 16994]
gi|313156568|gb|ADR35245.1| hypothetical protein Sulku_2590 [Sulfuricurvum kujiense DSM 16994]
Length = 449
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 77/246 (31%), Gaps = 44/246 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKWKD 69
+ L SGG DS LD + +S + + + + E
Sbjct: 149 ISLLSGGLDSFIGAIDTLDSGQKPLFIS-----HHNDAVTSSVQNYCLNALKEHFGDDSF 203
Query: 70 SLGEDHILPLAILGDISHSSLTKNVA------MKIQDNNLP---NTFVPGRNIIFLVFAA 120
+ H+ + L + T++ + + + LP VP N +
Sbjct: 204 YSIKSHVGFSSELFSSGYEDTTRSRSFLFYTLAILAASALPRDRKVIVPE-NGL------ 256
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET-AINLGMESHVTVHTPLMWLKKYE 179
+A + + + +G T + I + A L ++ V + P K +
Sbjct: 257 -IALNVPLDTLRLGALSTRTAH-----PYFIARLNQLAAKLSLD--VDIENPYRHQTKGQ 308
Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY---GCNSCPACYLRQK----GWM 232
+ + + + E+ +C K G+ C C C +R+ G+
Sbjct: 309 MI---DECKDKSFLRAHIAETMSC--SDPKKARWQGHSPQHCGYCLPCLIRRASIKHGFG 363
Query: 233 EFKEKY 238
+ + Y
Sbjct: 364 KDETSY 369
>gi|315637436|ref|ZP_07892648.1| thiamine biosynthesis protein ThiI [Arcobacter butzleri JV22]
gi|315478273|gb|EFU68994.1| thiamine biosynthesis protein ThiI [Arcobacter butzleri JV22]
Length = 488
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 25/179 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
S + L SGG DS+ + R + + F+ G K++ + W
Sbjct: 189 SVISLMSGGFDSTVASYLTMKRGIKTHFIFFNLGG------LAHEIGVKQVAYYL--WNK 240
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ +++ + S + K+V+ L + L+ + +A LGI
Sbjct: 241 FGSSHRVSFISVPFEDVVSQIFKDVSQPYMGVMLKR--------LMLLASEKIADSLGID 292
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+V G S + + + ++ V PL + K + ++AQ IG
Sbjct: 293 ALVTGESVAQVSS---------QTLRNLALIDQCTNKLVLRPLSMMSKPDIIEIAQKIG 342
>gi|157737660|ref|YP_001490343.1| thiamine biosynthesis protein ThiI [Arcobacter butzleri RM4018]
gi|157699514|gb|ABV67674.1| thiamine biosynthesis protein ThiI [Arcobacter butzleri RM4018]
Length = 488
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 25/179 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
S + L SGG DS+ + R + + F+ G K++ + W
Sbjct: 189 SVISLMSGGFDSTVASYLTMKRGIKTHFIFFNLGG------LAHEIGVKQVAYYL--WNK 240
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ +++ + S + K+V+ L + L+ + +A LGI
Sbjct: 241 FGSSHRVSFISVPFEDVVSQIFKDVSQPYMGVMLKR--------LMLLASEKIADSLGID 292
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+V G S + + + ++ V PL + K + ++AQ IG
Sbjct: 293 ALVTGESVAQVSS---------QTLRNLALIDQCTNKLVLRPLSMMSKPDIIEIAQKIG 342
>gi|325678421|ref|ZP_08158041.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
albus 8]
gi|324109922|gb|EGC04118.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
albus 8]
Length = 392
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 26/191 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+LL SGG DS R VE + F+ + +K+ ELM +
Sbjct: 181 AMLLLSGGIDSPVAGYMMARRGAVVEAIHFEAPPYTS---DRARMKVEKLAELMTAYCGD 237
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-GIT 129
+ + I + + + + ++ + + A + + I
Sbjct: 238 IKFFCVPFTEIQLKLRANCPEELFTILMRR-------------LMMEIAQRICEKEDDIQ 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + + + + + V P + L K E ++A+ IG
Sbjct: 285 ALITGESLGQVAS---------QTMYAMVCTDAACRMPVFRPCVGLDKAEIIEIARKIGT 335
Query: 190 QDLVNLILEES 200
+ L E+
Sbjct: 336 FETSILPYEDC 346
>gi|291458547|ref|ZP_06597937.1| thiamine biosynthesis/tRNA modification protein ThiI [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291419080|gb|EFE92799.1| thiamine biosynthesis/tRNA modification protein ThiI [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 395
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +E F + +K +
Sbjct: 178 PLGTNGKAMLLLSGGIDSPAAGYMIAKRGALIEACYF-----HAPPYTSERAKQKVVDLA 232
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E + ++ + + I I + + ++ + A
Sbjct: 233 EKLSRYAGPVALHVVNFTEIQLAIYEKCPHDELTILMRRY-------------MMRIAER 279
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + IG+ + G + +++ + + V+ PL+ K E
Sbjct: 280 IAEKRDC----IGLITGESIG-----QVASQTMQSLVCTNEVCRLPVYRPLIAFDKQEIV 330
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ IG + E+
Sbjct: 331 DIAERIGTYETSIEPYEDC 349
>gi|326791915|ref|YP_004309736.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium lentocellum DSM 5427]
gi|326542679|gb|ADZ84538.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium lentocellum DSM 5427]
Length = 360
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M++ KK ++ SGG DSS ++ V ++ Q E C
Sbjct: 1 MSETTKK--KVVVGMSGGVDSSVTAYLLKEQGYEVIGMTMQIWQEGAPEDSDGGCCGLSA 58
Query: 61 VELMPKWKDSLGEDH 75
V+ + L H
Sbjct: 59 VDDARRVCQKLDIPH 73
>gi|189183712|ref|YP_001937497.1| tRNA-specific 2-thiouridylase MnmA [Orientia tsutsugamushi str.
Ikeda]
gi|189180483|dbj|BAG40263.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Orientia tsutsugamushi str. Ikeda]
Length = 369
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
+ K+ + ++ SGG DSST + + V ++ Y + + C + I
Sbjct: 5 KVAKEQATIVVAMSGGVDSSTVAAILKEDGYNVIGITMQLYNHDTAINRKGACCAGQDIY 64
Query: 62 ELMPKWKDSLGEDHILP 78
+ ++L
Sbjct: 65 DAKFVANQLQIPHYVLN 81
>gi|148285130|ref|YP_001249220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Orientia tsutsugamushi str. Boryong]
gi|205816896|sp|A5CFJ6|MNMA_ORITB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|146740569|emb|CAM81183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Orientia tsutsugamushi str. Boryong]
Length = 369
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
+ K+ + ++ SGG DSST + + V ++ Y + + C + I
Sbjct: 5 KVAKEQATIVVAMSGGVDSSTVAAILKEDGYNVIGITMQLYNHDTAINRKGACCAGQDIY 64
Query: 62 ELMPKWKDSLGEDHILP 78
+ ++L
Sbjct: 65 DAKFVANQLQIPHYVLN 81
>gi|76802526|ref|YP_327534.1| thiamine biosynthesis protein ThiI (ATP pyrophosphatase)
[Natronomonas pharaonis DSM 2160]
gi|76558391|emb|CAI49982.1| thiamine biosynthesis protein ThiI (ATP pyrophosphatase)
[Natronomonas pharaonis DSM 2160]
Length = 383
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 30/180 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMPKWK 68
+ L SGG DS + L R V + DYG ++ R L +
Sbjct: 176 VALVSGGIDSPVAAAEMLRRGAPVIPVYVDLGDYGG-----VDHRARAISTCERLAARAP 230
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++ +++ D S+L + + ++ F A +A
Sbjct: 231 NTDCRPYVVDGGDTLDDIASALDRGRMLSVRRY-------------FFAVAEAIAEIEDA 277
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IV G S T R ++ + VH PL+ + K E + A+ +G
Sbjct: 278 AGIVTGEALGQKSS------QTARNLQVT---SAAVELPVHRPLLSMDKPEITERARKLG 328
>gi|325187233|emb|CCA21772.1| tRNA(Ile)lysidine synthase putative [Albugo laibachii Nc14]
Length = 660
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 60/215 (27%), Gaps = 60/215 (27%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-----RFDRVETLSFDYGQRNKVELECRLCVR 57
+ + P A+ L SGG DS + + + DYG R + EC
Sbjct: 217 NALSDTPVAVSL-SGGVDSMVLAYLLHKVRLSSHYYGIVAIHIDYGNRPESAAEC----- 270
Query: 58 KKIVELMPKWKDSLGED---HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
+ W D L + +++ ++ KI + +T+ R
Sbjct: 271 ----SYVKYWCDRLDIQFYARRID-----EVTRGETKRDEYEKIARDIRYSTY---R--- 315
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR--------------AIETAINL 160
++ + I I G D ++ ++
Sbjct: 316 ------SILEKHSIPGICFGHHRGD-----------VQENVVSNMMKGLSLLSLNGMSET 358
Query: 161 GMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNL 195
+ V + P++ K + A G +
Sbjct: 359 STANGVVIWRPMLEFDKSTIFDFAHRYGIPYFKDT 393
>gi|163816748|ref|ZP_02208111.1| hypothetical protein COPEUT_02938 [Coprococcus eutactus ATCC 27759]
gi|158448005|gb|EDP25000.1| hypothetical protein COPEUT_02938 [Coprococcus eutactus ATCC 27759]
Length = 395
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 60/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ + L SGG DS R VE + F + +K +
Sbjct: 175 PVGTNGKGMALLSGGIDSPVAAYMIAKRGVVVEAVYF-----HAPPFTSERAKQKVIDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ + ++ + + I + + + + ++ + A
Sbjct: 230 CLVADYAGAIKLHVVNFADVQMAIYDNCPHEELTIIMKRY-------------MIKIAEE 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA + + G S T+ ++ + + V P + + K E
Sbjct: 277 LAEKNDCQCTITGESIGQVSS------QTVFSLNVINQVST---MPVFRPCIGMDKQEIV 327
Query: 182 KLAQDIGGQDLVNLILEES 200
+++ IG + L E+
Sbjct: 328 DISEKIGTYETSILPYEDC 346
>gi|322834063|ref|YP_004214090.1| thiamine biosynthesis/tRNA modification protein ThiI [Rahnella sp.
Y9602]
gi|321169264|gb|ADW74963.1| thiamine biosynthesis/tRNA modification protein ThiI [Rahnella sp.
Y9602]
Length = 482
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+++A
Sbjct: 227 LWNRFGSSHRVRFIAVDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASSIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K K+
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHIIKI 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|294102163|ref|YP_003554021.1| argininosuccinate synthase [Aminobacterium colombiense DSM 12261]
gi|293617143|gb|ADE57297.1| argininosuccinate synthase [Aminobacterium colombiense DSM 12261]
Length = 406
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
+ +L +SGG D+S W ++ V T++ D GQ +V+LE K
Sbjct: 1 MLDKKKVVLAYSGGLDTSVATMWLKEQGYEVITMTADVGQ--QVDLEAAKQKALK 53
>gi|114566016|ref|YP_753170.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|122318873|sp|Q0AZQ5|MNMA_SYNWW RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|114336951|gb|ABI67799.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 338
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 15/122 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+L SGG DS+ ++ V L+ + +R E R+ +I
Sbjct: 5 VLMSGGIDSTVSALLLREQGYEVTGLTMVHLEREAGEKAARIANELQI------------ 52
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
E ++ L + S++ + + + PN V I A LG +
Sbjct: 53 EHKVVDL---REPFQSAVVDYFCREYEQGHTPNPCVKCNEEIKFGLLLKAALDLGADKVA 109
Query: 133 IG 134
G
Sbjct: 110 SG 111
>gi|315231454|ref|YP_004071890.1| hypothetical protein TERMP_01692 [Thermococcus barophilus MP]
gi|315184482|gb|ADT84667.1| hypothetical protein TERMP_01692 [Thermococcus barophilus MP]
Length = 274
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRK 58
+ +++K A++ FSGG+DS+ L A + + +E + D+G +E + +
Sbjct: 45 LEELMKDVDKAIVAFSGGKDSTVALYLAKEVYKVPELEAVMIDHGFMAGEAIENAKRIAE 104
Query: 59 KI 60
+
Sbjct: 105 YL 106
>gi|149185324|ref|ZP_01863641.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erythrobacter sp. SD-21]
gi|148831435|gb|EDL49869.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erythrobacter sp. SD-21]
Length = 383
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 44/140 (31%), Gaps = 26/140 (18%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVEL 63
++ SGG DSS + A V ++ +DYG + C C I +
Sbjct: 23 SESRIVVAMSGGVDSSVVAALAAKSGAEVIGITLQLYDYGAATGRKGAC--CAGDDIADA 80
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP-GR-NI------I 114
++ S+ + V D L T VP R N+ +
Sbjct: 81 RAVADRLGIAHYVSDH-------ESAFREEVVETFADEYLAGRTPVPCIRCNMGPKFTDL 133
Query: 115 FLVFAATLAYRLGITNIVIG 134
F +A LG + G
Sbjct: 134 F-----AMARELGADCLATG 148
>gi|289192655|ref|YP_003458596.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanocaldococcus sp. FS406-22]
gi|288939105|gb|ADC69860.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanocaldococcus sp. FS406-22]
Length = 373
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 58/186 (31%), Gaps = 31/186 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L L S G DS + R R L + E L +KIVE++ +
Sbjct: 182 KVLCLISDGIDSPVAAFMMIRRGCRAVLL-------HLKMNEEALNKVRKIVEILSDYDT 234
Query: 70 SLGE---DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L D+ + + + S +N L A A L
Sbjct: 235 ELEFVVYDYSKDIKDIVEKLKSIKKENYTCIFCKRK------------MLKVAEKYAKYL 282
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
IV G + + ++ + + PL+ L K + ++A+D
Sbjct: 283 DCDAIVTGDNLGQVAS---------QTLKNLRVISENISYPILRPLIGLDKNDIVEIAKD 333
Query: 187 IGGQDL 192
IG ++
Sbjct: 334 IGTYEI 339
>gi|312171556|emb|CBX79814.1| Thiamine biosynthesis protein thiI [Erwinia amylovora ATCC
BAA-2158]
Length = 482
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 64/192 (33%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +AI + + + K+ D + V R + + A+ +A
Sbjct: 227 --LWKRYGSTHRVRFVAINFE----PVVGEILEKVDDGQMG--VVLKR--MMVRAASQIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K KL
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDLVNL 195
A++IG +D
Sbjct: 328 AREIGTEDFART 339
>gi|310766825|gb|ADP11775.1| thiamine biosynthesis protein ThiI [Erwinia sp. Ejp617]
Length = 482
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 64/192 (33%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +AI + + + K+ D + V R + + A+ +A
Sbjct: 227 --LWKRYGSTHRVRFVAINFE----PVVGEILEKVDDGQMG--VVLKR--MMVRAASQIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K KL
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDLVNL 195
A++IG +D
Sbjct: 328 AREIGTEDFART 339
>gi|292487453|ref|YP_003530325.1| thiamine biosynthesis protein ThiI [Erwinia amylovora CFBP1430]
gi|292898695|ref|YP_003538064.1| thiamine biosynthesis protein [Erwinia amylovora ATCC 49946]
gi|291198543|emb|CBJ45651.1| thiamine biosynthesis protein [Erwinia amylovora ATCC 49946]
gi|291552872|emb|CBA19917.1| Thiamine biosynthesis protein thiI [Erwinia amylovora CFBP1430]
Length = 482
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 64/192 (33%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +AI + + + K+ D + V R + + A+ +A
Sbjct: 227 --LWKRYGSTHRVRFVAINFE----PVVGEILEKVDDGQMG--VVLKR--MMVRAASQIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K KL
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDLVNL 195
A++IG +D
Sbjct: 328 AREIGTEDFART 339
>gi|188534649|ref|YP_001908446.1| thiamine biosynthesis protein ThiI [Erwinia tasmaniensis Et1/99]
gi|238691978|sp|B2VHS0|THII_ERWT9 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|188029691|emb|CAO97570.1| Thiamine biosynthesis protein ThiI [Erwinia tasmaniensis Et1/99]
Length = 482
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 64/192 (33%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +AI + + + K+ D + V R + + A+ +A
Sbjct: 227 --LWKRYGSTHRVRFVAINFE----PVVGEILEKVDDGQMG--VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K KL
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDLVNL 195
A++IG +D
Sbjct: 328 AREIGTEDFART 339
>gi|49474501|ref|YP_032543.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella quintana str. Toulouse]
gi|81646912|sp|Q6FZ46|MNMA_BARQU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|49240005|emb|CAF26420.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella quintana str. Toulouse]
Length = 408
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 48/190 (25%), Gaps = 15/190 (7%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DSS V ++ Y C + I +
Sbjct: 14 NSRIVVAMSGGVDSSVVAGLLKKEGYDVIGITLQLYDHGAATHRVGACCAGQDIEDARRV 73
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++L ++ A P V + A L
Sbjct: 74 AETLGIPHYVLD---YEKRFREAVIDPFAESYAHGETPVPCVACNQTVKFADLLATAREL 130
Query: 127 GITNIVIGV------CETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKY 178
G + G + + R + ++ + PL L K
Sbjct: 131 GADALATGHYIRSRPHGAHRALF---RPFDVERDQSYFLFATTQEQIDYLRFPLGDLPKA 187
Query: 179 ETWKLAQDIG 188
++A ++G
Sbjct: 188 HVREIATEMG 197
>gi|316935452|ref|YP_004110434.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopseudomonas palustris DX-1]
gi|315603166|gb|ADU45701.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopseudomonas palustris DX-1]
Length = 401
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 12/130 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C + I + +
Sbjct: 19 RVVVAMSGGVDSSATAALLKAQGYDVVGITLQLYDHGAAIHRKGACCAGQDIHDARAVAE 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R++ F AT A
Sbjct: 79 RIGIPHYVLD---YESRFRESVIDSFADSYASGETP---VPCIECNRSVKFRDLLAT-AR 131
Query: 125 RLGITNIVIG 134
LG + + G
Sbjct: 132 ELGASALATG 141
>gi|167737225|ref|ZP_02409999.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 14]
Length = 370
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 35/93 (37%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
++I G+ + A+ + N
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIAN 325
>gi|153953453|ref|YP_001394218.1| thiamine biosynthesis protein ThiI [Clostridium kluyveri DSM 555]
gi|219854076|ref|YP_002471198.1| hypothetical protein CKR_0733 [Clostridium kluyveri NBRC 12016]
gi|189030623|sp|A5N6D9|THII_CLOK5 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|254784221|sp|B9DZV9|THII_CLOK1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|146346334|gb|EDK32870.1| ThiI [Clostridium kluyveri DSM 555]
gi|219567800|dbj|BAH05784.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 381
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 25/189 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
LL+ SGG DS R ++ + F + E K++ ++ + ++
Sbjct: 175 LLMLSGGIDSPVAGYMMARRGVQLNCIYF---HSHPYTSERAKEKVKELAGILKGYTGNI 231
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
I I + + ++ + A +A + I ++
Sbjct: 232 NLYITPFTEIQMQIIEKCRKDELTIIMRR-------------FMMRIACIIADKYNINSV 278
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
G + + +E + + V PL+ + K + ++A++IG +
Sbjct: 279 TTGESIGQVAS---------QTMEGLVVSNQAADRPVFRPLIAMDKVDIMEVAREIGTYE 329
Query: 192 LVNLILEES 200
L E+
Sbjct: 330 TSILPYEDC 338
>gi|147920111|ref|YP_686127.1| putative thiamine biosynthesis protein [uncultured methanogenic
archaeon RC-I]
gi|110621523|emb|CAJ36801.1| putative thiamine biosynthesis protein [uncultured methanogenic
archaeon RC-I]
Length = 393
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 54/184 (29%), Gaps = 29/184 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKWKD 69
+ + SGG DS + R + + F + + + + + KW
Sbjct: 184 VAMVSGGIDSPVAAWLMMKRGCEIVPVFF-----HNAPYFDDTTMNRALDTLRELSKWCP 238
Query: 70 SLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
G +++P + + + A +A + G
Sbjct: 239 GHGMTAYVMPHGPNLQAFQEKGNQKYTCVFCKH------------LMYKVARAIAEKEGA 286
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IV G + + + ++ PL+ + K E +L++ IG
Sbjct: 287 HGIVTGSSIGQVAS---------QTSNNMLAEIYGVDFPINHPLIGMDKDEIVELSRRIG 337
Query: 189 GQDL 192
DL
Sbjct: 338 LFDL 341
>gi|220931733|ref|YP_002508641.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Halothermothrix orenii H 168]
gi|259495830|sp|B8CWH7|MNMA_HALOH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|219993043|gb|ACL69646.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Halothermothrix orenii H 168]
Length = 358
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 41/130 (31%), Gaps = 9/130 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELM 64
L+ SGG DSS + ++ V + DY Q L+ C +E
Sbjct: 2 DRVLVAMSGGVDSSVTAALLKEQGYEVIGGTMEIFPDYEQ---PPLDEGGCCSLSSIEDA 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ +G H L + + N + ++ PN V N I A
Sbjct: 59 RRVAHHIGIRHY--TFNLKKVFEEEVINNFVNEYKNARTPNPCVVCNNEIKFRSLLKKAL 116
Query: 125 RLGITNIVIG 134
L I G
Sbjct: 117 ELDADYIATG 126
>gi|251790662|ref|YP_003005383.1| thiamine biosynthesis protein ThiI [Dickeya zeae Ech1591]
gi|247539283|gb|ACT07904.1| thiamine biosynthesis/tRNA modification protein ThiI [Dickeya zeae
Ech1591]
Length = 482
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAIDFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 IAERYGVEALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDL 192
+LA+++G +D
Sbjct: 326 RLARELGTEDF 336
>gi|116490973|ref|YP_810517.1| argininosuccinate synthase [Oenococcus oeni PSU-1]
gi|118586470|ref|ZP_01543915.1| argininosuccinate synthase [Oenococcus oeni ATCC BAA-1163]
gi|122276845|sp|Q04FC0|ASSY_OENOB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|116091698|gb|ABJ56852.1| argininosuccinate synthase [Oenococcus oeni PSU-1]
gi|118433093|gb|EAV39814.1| argininosuccinate synthase [Oenococcus oeni ATCC BAA-1163]
Length = 406
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A +L +SGG D+S + W D+ V +S D GQ + ++E KI +
Sbjct: 1 MADKIVLAYSGGLDTSVAIPWLKDKGYEVIAVSLDVGQ-HGKQIENIQKKALKIGAIQSF 59
Query: 67 WKDSLGE 73
D E
Sbjct: 60 IIDGKDE 66
>gi|110803991|ref|YP_698721.1| thiamine biosynthesis protein ThiI [Clostridium perfringens SM101]
gi|123047381|sp|Q0ST36|THII_CLOPS RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|110684492|gb|ABG87862.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens SM101]
Length = 385
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +++ SGG DS R + Y + E K++ +++ +
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCV---YYHSHPYTSERAKDKVKELAKIVGR 229
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I DI + + ++ + A L+ R
Sbjct: 230 YTEKITLYVVPFTEIQMDIIEKCREDELTIIMRR-------------FMMRVACELSERK 276
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +I G + + +E + S V PL+ + K + +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLMVSNDVSDRPVFRPLIAMDKEDIMDIARD 327
Query: 187 IGGQDLVNLILEES 200
I D L E+
Sbjct: 328 IDTYDTSILPYEDC 341
>gi|75674801|ref|YP_317222.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrobacter winogradskyi Nb-255]
gi|123614062|sp|Q3SV21|MNMA_NITWN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|74419671|gb|ABA03870.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrobacter winogradskyi Nb-255]
Length = 400
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 57/191 (29%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + C + I +
Sbjct: 15 RVVVAMSGGVDSSVTAALLKSEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAA 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L ++ +N A P VP R + F AT A
Sbjct: 75 RLGVPHYVLD---YESRFRETVIENFADSYASGETP---VPCIECNRQVKFRDLLAT-AR 127
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLMWLKK 177
LG + G D + A +T E + PL + K
Sbjct: 128 ELGAAALATG-HYVSSRRLADGSRALLCAADTDRDQSYFLFATTREQLDFLRFPLGDMTK 186
Query: 178 YETWKLAQDIG 188
+T +LA+ G
Sbjct: 187 QQTRELARRFG 197
>gi|168335000|ref|ZP_02693116.1| thiamine biosynthesis/tRNA modification protein ThiI [Epulopiscium
sp. 'N.t. morphotype B']
Length = 393
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R + + F + + K++EL K
Sbjct: 184 KATLLLSGGIDSPVAGWMIAKRGVEINAVYF-----HSPPYTSE-RAKDKVIELAKKLAI 237
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G H++ + +A++ Q T + R I + A +A + G
Sbjct: 238 YTGGIRVHVINFTQI----------QLAIQEQCPINQLTIIMRR--IMMEVAQRIADKTG 285
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ G + + + + + + V PL+ K E K+A+ I
Sbjct: 286 SQALITGESIGQVAS---------QTLHSLVVTNAAADRPVFRPLIGFDKQEIIKIAERI 336
Query: 188 GGQDLVNLILEES 200
+ L E+
Sbjct: 337 DTFNTSILPYEDC 349
>gi|114798727|ref|YP_759370.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hyphomonas neptunium ATCC 15444]
gi|123323559|sp|Q0C4H3|MNMA_HYPNA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|114738901|gb|ABI77026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hyphomonas neptunium ATCC 15444]
Length = 394
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 39/130 (30%), Gaps = 12/130 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DSS + V ++ Y +E + C + I +
Sbjct: 26 RVVAAMSGGVDSSVVAAMLKAEGYDVIGITLQLYDHGAAIEKKGACCAGQDIHDARNVSD 85
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP-GR-N-IIFLVFAATLAY 124
++L S + V D L +T +P R N + A
Sbjct: 86 AIGIPHYVLDY-------ESRFREQVMEDFADTYLSGSTPIPCIRCNQTVKFADLLATAK 138
Query: 125 RLGITNIVIG 134
LG + G
Sbjct: 139 ELGADCLATG 148
>gi|41407797|ref|NP_960633.1| hypothetical protein MAP1699 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396151|gb|AAS04016.1| ThiI [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 409
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 25/193 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A++L SGG DS A+ R + L C +
Sbjct: 178 PVGSSGRAVVLLSGGFDSPVAAYRAMRRGLACDFLH---------------CTGAPFTDA 222
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+K + + +++ + V R ++L A LA
Sbjct: 223 SSTYKAYALVRQLTRFQPRCRLYVAAVGRAQRTLAASGAGEAQIVAQR-RLYLRLACGLA 281
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+G +V G D G + + + + V PL+ K E
Sbjct: 282 ERIGAQAVVTG----DSLG-----QVASQTLPNLAATEQAATLPVLRPLLGFDKQEILAE 332
Query: 184 AQDIGGQDLVNLI 196
A+ IG ++ L
Sbjct: 333 ARRIGTAEIAMLP 345
>gi|253990910|ref|YP_003042266.1| thiamine biosynthesis protein ThiI [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782360|emb|CAQ85524.1| Thiamine biosynthesis protein thiI [Photorhabdus asymbiotica]
Length = 482
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 64/192 (33%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +A+ + + + K+ D + V R + + A+ +A
Sbjct: 227 L--WNRFGSSHKVRFVAVDFE----PVVAEILEKVDDGQMG--VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + S + PL+ K +L
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIRL 327
Query: 184 AQDIGGQDLVNL 195
A++IG +D
Sbjct: 328 AREIGTEDFART 339
>gi|37527743|ref|NP_931088.1| thiamine biosynthesis protein ThiI [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|44888378|sp|Q7N0J9|THII_PHOLL RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|36787179|emb|CAE16256.1| Thiamine biosynthesis protein ThiI [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 482
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 64/192 (33%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +A+ + + + K+ D + V R + + A+ +A
Sbjct: 227 L--WNRFGSSHKVRFVAVDFE----PVVAEILEKVDDGQMG--VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + S + PL+ K +L
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIRL 327
Query: 184 AQDIGGQDLVNL 195
A++IG +D
Sbjct: 328 AREIGTEDFART 339
>gi|227872813|ref|ZP_03991127.1| thiamine biosynthesis protein [Oribacterium sinus F0268]
gi|227841340|gb|EEJ51656.1| thiamine biosynthesis protein [Oribacterium sinus F0268]
Length = 402
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +E F + K +
Sbjct: 178 PLGTNGKAMLLLSGGIDSPVAGYKVAKRGALLEATYF-----HAPPYTSERAKIKVMDLA 232
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + + + + I I + + + ++ + A
Sbjct: 233 KQVSTYTGPILLHVVNFTDIQLAIYEHCPHEELTIIMRRY-------------MMRIAEA 279
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LAY+ IG+ + G + +++ + + V+ PL+ K E
Sbjct: 280 LAYKNNC----IGLITGESIG-----QVASQTLQSLVCTNEVCTLPVYRPLIAFDKQEIV 330
Query: 182 KLAQDIGGQDLVNLILEES 200
+AQ+IG + E+
Sbjct: 331 DVAQEIGTYETSIEPYEDC 349
>gi|317047158|ref|YP_004114806.1| thiamine biosynthesis/tRNA modification protein ThiI [Pantoea sp.
At-9b]
gi|316948775|gb|ADU68250.1| thiamine biosynthesis/tRNA modification protein ThiI [Pantoea sp.
At-9b]
Length = 482
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 64/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGRSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASM 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
KLA+DIG +D
Sbjct: 326 KLARDIGTEDFART 339
>gi|242240307|ref|YP_002988488.1| thiamine biosynthesis protein ThiI [Dickeya dadantii Ech703]
gi|242132364|gb|ACS86666.1| thiamine biosynthesis/tRNA modification protein ThiI [Dickeya
dadantii Ech703]
Length = 482
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K+ D + V R + + A+ +A
Sbjct: 227 LWNRFGSSHRVRFVAVDFEPVVG------EILEKVDDGQMG--VVLKR--MMVRAASRIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K KL
Sbjct: 277 ERYGVEALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDL 192
A+++G +D
Sbjct: 328 ARELGTEDF 336
>gi|85709728|ref|ZP_01040793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erythrobacter sp. NAP1]
gi|85688438|gb|EAQ28442.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erythrobacter sp. NAP1]
Length = 390
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 47/140 (33%), Gaps = 26/140 (18%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVEL 63
++ SGG DSS + A D V ++ +DYG + C C I +
Sbjct: 28 SECRIVVAMSGGVDSSVVAALAADTGAEVIGITLQLYDYGAATGRKGAC--CAGDDIADA 85
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP-GR-NI------I 114
++ S+ ++V + D L T VP R N+ +
Sbjct: 86 RAVSDRLGIAHYVFDH-------ESAFREDVVEQFADEYLAGRTPVPCIRCNMGPKFTDL 138
Query: 115 FLVFAATLAYRLGITNIVIG 134
F +A LG + G
Sbjct: 139 F-----RMARELGADCLATG 153
>gi|15922554|ref|NP_378223.1| thiamine biosynthesis protein ThiI [Sulfolobus tokodaii str. 7]
gi|20140701|sp|Q96YE5|THII_SULTO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|15623344|dbj|BAB67332.1| 368aa long hypothetical thiamine biosynthesis protein thiI
[Sulfolobus tokodaii str. 7]
Length = 368
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 27/183 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++LFSGG DS + R V L+F G V KKIV K
Sbjct: 167 RTIVLFSGGFDSPIATWMMMKRGSSVTLLNFKLG----------GEVHKKIVLDEVKILS 216
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
H + + + I S V I+ V R I A LA ++
Sbjct: 217 EWNSGHKIKVYFVNGIKVLSALAGVKRYIR------VVVLKR--IMYKTAELLAKKINAY 268
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + S + ++ + ++ + PL+ K E +L++ +G
Sbjct: 269 SVTTGESLSQVSS---------QTMKNLFVTEYDINIPIFRPLIGFDKEEIIELSRKVGT 319
Query: 190 QDL 192
+
Sbjct: 320 YEY 322
>gi|300722006|ref|YP_003711286.1| sulfur transfer protein [Xenorhabdus nematophila ATCC 19061]
gi|297628503|emb|CBJ89070.1| sulfur transfer protein (from cys to ThiS and from IscS to U8-tRNA)
[Xenorhabdus nematophila ATCC 19061]
Length = 482
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +A+ + + + K+ D + V R + + A+ +A
Sbjct: 227 L--WNRFGSSHKVRFVAVDFE----PVVAEILEKVDDGQMG--VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + S + PL+ K KL
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDLVNL 195
A +IG +D
Sbjct: 328 ACEIGTEDFART 339
>gi|197294645|ref|YP_001799186.1| thiamine biosynthesis protein ThiI [Candidatus Phytoplasma
australiense]
gi|171853972|emb|CAM11935.1| Thiamine biosynthesis protein [Candidatus Phytoplasma australiense]
Length = 437
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 25/200 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE-LECRLCVRKKIVELMPKWK 68
L+ SGG DS A+ + +E L F+ +E ++ + + K + +
Sbjct: 182 KGLVFLSGGIDSPVAAYLAMKKGIAIELLHFEASPLTPLESVQKVIDLAKILSRYSANGQ 241
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L H++P L + H ++ + + + +A
Sbjct: 242 VKL---HLIPFRTLQETIHQKVSDAYIINVMRR------------MMYRLGDQIAKTNHH 286
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
++ G + T+ +++T + +++ + PL + K + ++A++I
Sbjct: 287 LCLINGESVGQVAS------QTLESMQTTSCI---TNINILRPLAMMDKNQIIEIAKNIE 337
Query: 189 GQDLVNLILEESHTCYLGKR 208
D+ ++ T YL R
Sbjct: 338 TFDISIRPFQDCCTVYLPSR 357
>gi|320540323|ref|ZP_08039975.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Serratia symbiotica str. Tucson]
gi|320029643|gb|EFW11670.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Serratia symbiotica str. Tucson]
Length = 482
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R RV F+ G K++
Sbjct: 173 PVGTQDDVLSLISGGFDSGVSSYMLMRRGCRVHFCFFNLGG------AAHEICVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +AI + + + K+ D + V R + + A+ +A
Sbjct: 227 L--WNRFASSHKVRFVAIDFE----PVVGEILEKVDDGQMG--VVLKR--MMVRAASQIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K K+
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKV 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|218884002|ref|YP_002428384.1| Thiamine biosynthesis/tRNA modification protein ThiI
[Desulfurococcus kamchatkensis 1221n]
gi|254784222|sp|B8D4I6|THII_DESK1 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|218765618|gb|ACL11017.1| Thiamine biosynthesis/tRNA modification protein ThiI
[Desulfurococcus kamchatkensis 1221n]
Length = 482
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 71/212 (33%), Gaps = 50/212 (23%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + AL+LFSGG DS R V+ L + G ++V + RK E
Sbjct: 168 PLGSSGRALVLFSGGFDSPVAAWMIAKRGVEVDFLHYVMGS-SEVSRQAFSVARKLSEEW 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAAT 121
+ + PL + + + ++ V R + + A
Sbjct: 227 LSSYNPRFITVDFTPL----------------IAEIEERIEWSYRQVVLR-ALMYMVADK 269
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT----------P 171
+A LG IV G A+ A + + + V V + P
Sbjct: 270 IATELGYNTIVTG-----------------EALSQASSQTLANLVAVESAVSPRSIILRP 312
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTC 203
L+ K E + ++ IG D + + E TC
Sbjct: 313 LIGFDKEEIIEYSRRIGLYDYSSRVAE---TC 341
>gi|88798892|ref|ZP_01114474.1| thiamine biosynthesis protein ThiI [Reinekea sp. MED297]
gi|88778372|gb|EAR09565.1| thiamine biosynthesis protein ThiI [Reinekea sp. MED297]
Length = 544
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 41/205 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A S L L SGG DS+ + R + L F+ G + E+
Sbjct: 232 PLGSADSTLTLVSGGFDSTVAAYQMIRRGVKTHFLFFNLGG---------AAHENGVKEV 282
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G H + + + +N+ ++D + V R + + A ++
Sbjct: 283 IYYLWKKYGSSHKVQFVSVPFEG---VVENILESVEDRYMG--VVLKR--MMMRAANQVS 335
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV--------HTPLMWL 175
RL + + V G A+ + M + + PL
Sbjct: 336 DRLKLDSYVTG-----------------EALSQVSSQTMMNQRLIDDVADRLVIRPLAVT 378
Query: 176 KKYETWKLAQDIGGQDLVNLILEES 200
K++ +A+ IG V I E
Sbjct: 379 DKHDIVTIARQIGAASFVERIPEYC 403
>gi|182626455|ref|ZP_02954207.1| peptidase T [Clostridium perfringens D str. JGS1721]
gi|177908252|gb|EDT70810.1| peptidase T [Clostridium perfringens D str. JGS1721]
Length = 385
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +++ SGG DS R + Y + E K++ +++ +
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCV---YYHSHPYTSERAKDKVKELAKIVGR 229
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I DI + + ++ + A L+ R
Sbjct: 230 YTEKITLYVVPFTEIQMDIIEKCREDELTIIMRR-------------FMMRVACELSERK 276
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +I G + + +E I S V PL+ + K + +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLIVSNDVSDRPVFRPLIAMDKEDIMDIARD 327
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 328 IDTYETSILPYEDC 341
>gi|281357010|ref|ZP_06243500.1| thiamine biosynthesis/tRNA modification protein ThiI [Victivallis
vadensis ATCC BAA-548]
gi|281316568|gb|EFB00592.1| thiamine biosynthesis/tRNA modification protein ThiI [Victivallis
vadensis ATCC BAA-548]
Length = 400
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 41/207 (19%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ P L L SGG DS + R + ++F + V K I
Sbjct: 186 PVGSNPKVLTLLSGGIDSPVAAWQIMKRGCPTDFITF-----HSAPYTPPETVDKVRGIA 240
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII----FLV 117
E + ++ G H+ LA + + + + R ++ L
Sbjct: 241 EHLNTFQQH-GVLHLCNLAPMQKLIRDNCNER----------------FRTVLYRRAMLR 283
Query: 118 FAATLAYRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
A +A G +V G S TI + T + + V PL+
Sbjct: 284 IAEQVAKNTGCRALVTGEAVGQVAS-------QTIVNMNT---INRAVDMLVLRPLVGAD 333
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTC 203
K E+ ++A +IG +L N+ + + +C
Sbjct: 334 KLESIRIAGEIGTLELSNVQVPD--SC 358
>gi|157369324|ref|YP_001477313.1| thiamine biosynthesis protein ThiI [Serratia proteamaculans 568]
gi|189030644|sp|A8GAP5|THII_SERP5 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|157321088|gb|ABV40185.1| thiamine biosynthesis/tRNA modification protein ThiI [Serratia
proteamaculans 568]
Length = 482
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PVGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + K++D + V R + + A+ +A
Sbjct: 227 --LWNRFASSHKVRFIAIDFE----PVVGEILEKVEDGQMG--VVLKR--MMVRAASQIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K K+
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKV 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|271499583|ref|YP_003332608.1| thiamine biosynthesis/tRNA modification protein ThiI [Dickeya
dadantii Ech586]
gi|270343138|gb|ACZ75903.1| thiamine biosynthesis/tRNA modification protein ThiI [Dickeya
dadantii Ech586]
Length = 482
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAIDFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 IAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDL 192
+LA+++G +D
Sbjct: 326 RLARELGTEDF 336
>gi|225017115|ref|ZP_03706307.1| hypothetical protein CLOSTMETH_01040 [Clostridium methylpentosum
DSM 5476]
gi|224950128|gb|EEG31337.1| hypothetical protein CLOSTMETH_01040 [Clostridium methylpentosum
DSM 5476]
Length = 391
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 60/197 (30%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+LL SGG DS R ++ + F + + + E
Sbjct: 174 PVGSSGKAMLLVSGGIDSPVAGYMMAKRGLQLHAVHFVSPPYTS---DRARQKVETLCEE 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
M + + + I + + + ++ + + A L
Sbjct: 231 MAHYCGDITFHCVPFTEIQEALKEHCPEELFTILMRR-------------LMMKIAQRLC 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I ++ G + + + + V P++ + K E ++
Sbjct: 278 AQQDIHALITGESVGQVAS---------QTLGAIACTDAVCEMPVFRPVIGMDKNEIIEI 328
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + L E+
Sbjct: 329 ARRIGTFETSILPYEDC 345
>gi|290890450|ref|ZP_06553525.1| hypothetical protein AWRIB429_0915 [Oenococcus oeni AWRIB429]
gi|290479846|gb|EFD88495.1| hypothetical protein AWRIB429_0915 [Oenococcus oeni AWRIB429]
Length = 406
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A +L +SGG D+S + W D+ V +S D GQ + ++E KI +
Sbjct: 1 MADKIVLAYSGGLDTSVTIPWLKDKGYEVIAVSLDVGQ-HGKQIENIQKKALKIGAIQSF 59
Query: 67 WKDSLGE 73
D E
Sbjct: 60 IIDGKDE 66
>gi|240104187|ref|YP_002960496.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
gi|239911741|gb|ACS34632.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
Length = 304
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++K L++ SGG+DS+ +E L + G
Sbjct: 42 KMLKPDEKVLVVVSGGKDSAVTAYILKKLGYNIECLHINLG 82
>gi|241206171|ref|YP_002977267.1| tRNA-specific 2-thiouridylase MnmA [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860061|gb|ACS57728.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 403
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 54/190 (28%), Gaps = 14/190 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 18 RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 77
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 78 TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 134
Query: 129 TNIVIG-VCETDYSGYPDC-------RHDTIRAIETAINLGMESHV--TVHTPLMWLKKY 178
+ G + + PD R ++ + PL L K
Sbjct: 135 DALATGHYIRSGRNPSPDNPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 194
Query: 179 ETWKLAQDIG 188
ET +LA+++G
Sbjct: 195 ETRRLAEEMG 204
>gi|288573314|ref|ZP_06391671.1| argininosuccinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569055|gb|EFC90612.1| argininosuccinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 411
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+++K +L +SGG D+S + W ++R V TL+ D GQ +E + ++ V
Sbjct: 1 MMEKKGKVVLAYSGGLDTSVAVCWLMERGYDVVTLTADVGQSVNLEEKKAKSLQTGAVAA 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|149921054|ref|ZP_01909513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Plesiocystis pacifica SIR-1]
gi|149818058|gb|EDM77515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Plesiocystis pacifica SIR-1]
Length = 367
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 68/198 (34%), Gaps = 28/198 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DSS + ++ V L+ Y + + + C ++L +
Sbjct: 2 RVVCAMSGGVDSSVAAALMVEAGHEVIGLTMALYDAKGERKGRGGTCCSPAEIDLARRAC 61
Query: 69 DSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GR-N-IIFLVFAATLAY 124
D LG H + + +++ + A + PN P R N + A
Sbjct: 62 DLLGVPHYTVDE---RERFQAAVIDDFAREYLAGRTPN---PCARCNEHVKFGPLLARAR 115
Query: 125 RLGITNIVIGVCE--TDYSGYP------DCRHD---TIRAIETAINLGMESHVTVHTPLM 173
LG +V G D P D D + A+ G E+ V PL
Sbjct: 116 ALGAELLVTGHYAQIVDGEAGPALHRGVDASKDQSYFLFAM------GRETLAEVAFPLG 169
Query: 174 WLKKYETWKLAQDIGGQD 191
K + + A+++G +
Sbjct: 170 AWSKAQVREKARELGMPN 187
>gi|188997646|ref|YP_001931897.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188932713|gb|ACD67343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 352
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 27/67 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSST + V +S + + EL+ ++C K + K
Sbjct: 2 KKIVVGLSGGVDSSTAAFLLKKQGYEVVGISLKFTDIDSCELDTQVCCSDKDILDAKKVA 61
Query: 69 DSLGEDH 75
+ L H
Sbjct: 62 EFLEIPH 68
>gi|332795772|ref|YP_004457272.1| thiamine biosynthesis protein ThiI [Acidianus hospitalis W1]
gi|332693507|gb|AEE92974.1| thiamine biosynthesis protein ThiI [Acidianus hospitalis W1]
Length = 467
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 26/183 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL L SGG DS + R ++ L + N L + V KI E +
Sbjct: 171 KALALVSGGIDSPVASWMIMKRGVTLDILHCNISGPNN--LSSIMKVIDKIKEWSQGYTP 228
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ I+ + + ++ K V +++ V + ++L A A ++G
Sbjct: 229 RVF---IVDCGKIME----AIMKKVDIRLWS-------VAFKRALYL-IAINYADKIGAK 273
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G S + + L + + PL+ K E KLA++IG
Sbjct: 274 AIVTGESLGQVSS---------QTLSVLSGLQHKIDLLFLRPLIGFDKDEIVKLAREIGT 324
Query: 190 QDL 192
+L
Sbjct: 325 FEL 327
>gi|305663660|ref|YP_003859948.1| thiamine biosynthesis/tRNA modification protein ThiI [Ignisphaera
aggregans DSM 17230]
gi|304378229|gb|ADM28068.1| thiamine biosynthesis/tRNA modification protein ThiI [Ignisphaera
aggregans DSM 17230]
Length = 409
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 65/190 (34%), Gaps = 39/190 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L L SGG DS +A+ R V + F+ G + R V +
Sbjct: 183 RVLALISGGIDSPVAAWYAMKRGCEVHMVLFNIG----GDEHVRGGVMVAKALVDRWAYG 238
Query: 70 SLGEDHILPL-AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ +I+ + I+ I+ + + + + ++ A LA ++
Sbjct: 239 YRPKMYIVDIRPIISRIALYAPEEYMVILLRRY-------------MSRLAEYLARKIDA 285
Query: 129 TNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
IV G +T + Y IE A+ + + PL+ K E +
Sbjct: 286 LAIVTGESLGQVASQTLSNIY---------VIEEAVT------IPILRPLIGFDKDEIVR 330
Query: 183 LAQDIGGQDL 192
+A+ IG +
Sbjct: 331 MARFIGTYEY 340
>gi|150399415|ref|YP_001323182.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
vannielii SB]
gi|150012118|gb|ABR54570.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
vannielii SB]
Length = 385
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 28/194 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L S G DS R ++ L + E L KK+ +++ +
Sbjct: 186 KVLVLLSDGIDSPVAAYMMAKRGCKLVLL-------HLKTSEEGLEKTKKLYDVLSDFDP 238
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
HI L I + LTK K T L A A
Sbjct: 239 EAKFIHIDFTEELLRI-KNDLTKIEREKYTCLFCKKT--------MLRTAERHASYQKCD 289
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
I+ G + T++ + ++ G + + PL+ L K E +A+ IG
Sbjct: 290 AIINGDNMGQVAS------QTLKNL-RVVSEGTKYP--ILRPLIGLDKVEIMNIARKIGT 340
Query: 190 QDLVNLILEESHTC 203
++ + + +C
Sbjct: 341 F---DISISKEISC 351
>gi|153008906|ref|YP_001370121.1| tRNA-specific 2-thiouridylase MnmA [Ochrobactrum anthropi ATCC
49188]
gi|166235072|sp|A6WZ88|MNMA_OCHA4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|151560794|gb|ABS14292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ochrobactrum anthropi ATCC 49188]
Length = 398
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 15/188 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS V ++ C + +E + +
Sbjct: 16 RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
SLG H +L ++ A P V + A LG
Sbjct: 76 SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132
Query: 129 TNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
+ G + Y R ++ + PL L K +
Sbjct: 133 DALATGHYIRSRANGAHRALY---RPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQV 189
Query: 181 WKLAQDIG 188
++A+++G
Sbjct: 190 REIAEEMG 197
>gi|297619959|ref|YP_003708064.1| argininosuccinate synthase [Methanococcus voltae A3]
gi|297378936|gb|ADI37091.1| argininosuccinate synthase [Methanococcus voltae A3]
Length = 399
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 36/202 (17%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
M KK A+L +SGG D+S CL D++ V +++ D GQ + +E +K
Sbjct: 1 MAHENKKI--AVLAYSGGLDTSCCLKLLEDKYDYSVVSVAVDVGQPAEDLIEPEEKAKK- 57
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ E H + + + + + + P + R +I + A
Sbjct: 58 ---------FGVLEHHTIDAKE--EFAKDYIFRAIKANALYEGYPLSTALARPLIAVKIA 106
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL--M 173
LA L + I G C E+ I + + P+ +
Sbjct: 107 -ELAESLNASAISHG-----------CTGKGNDQF--RFES-IMRAKTPSIEIVAPIRDL 151
Query: 174 WLKKYETWKLAQDIGGQDLVNL 195
L + E + A++ G V+L
Sbjct: 152 NLTRTEEIEYAREKGIPVPVDL 173
>gi|239832470|ref|ZP_04680799.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ochrobactrum intermedium LMG 3301]
gi|239824737|gb|EEQ96305.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ochrobactrum intermedium LMG 3301]
Length = 411
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 15/188 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS V ++ C + +E + +
Sbjct: 29 RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 88
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
SLG H +L ++ A P V + A LG
Sbjct: 89 SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 145
Query: 129 TNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
+ G + Y R ++ + PL L K +
Sbjct: 146 DALATGHYIRSRANGAHRALY---RPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQV 202
Query: 181 WKLAQDIG 188
++A+++G
Sbjct: 203 REIAEEMG 210
>gi|205822308|sp|A7HV69|MNMA_PARL1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 399
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 16/132 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V ++ Y V + C + I +
Sbjct: 17 RVVVAMSGGVDSSVTAALLKEQGYDVVGITLQLYDHGAAVSRKGACCAGQDIQDARRVAD 76
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D ++ + A P N V R+++
Sbjct: 77 QIGIPHYVLD---YEDRFRRAVMDDFADSYAAGETPIPCVRCNERVKFRDLL------DT 127
Query: 123 AYRLGITNIVIG 134
A LG + G
Sbjct: 128 ARDLGAAALATG 139
>gi|148642677|ref|YP_001273190.1| thiamine biosynthesis ATP pyrophosphatase, ThiI [Methanobrevibacter
smithii ATCC 35061]
gi|222445826|ref|ZP_03608341.1| hypothetical protein METSMIALI_01470 [Methanobrevibacter smithii
DSM 2375]
gi|229558682|sp|A5UKU4|THII_METS3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|148551694|gb|ABQ86822.1| thiamine biosynthesis ATP pyrophosphatase, ThiI [Methanobrevibacter
smithii ATCC 35061]
gi|222435391|gb|EEE42556.1| hypothetical protein METSMIALI_01470 [Methanobrevibacter smithii
DSM 2375]
Length = 381
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 29/190 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPK 66
++L S G DS + R V L D + K I +L
Sbjct: 177 KVVVLVSSGIDSPVAAYLMMKRGCEVIALHCD-----NAPFTGPKVHENFDKIIDQLQSY 231
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K ++ + + + + + A LA++
Sbjct: 232 AKGVPITKKVVKYGEYLQQAKDCAPEKMTCVLCKSG------------MYKIAEKLAHKY 279
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G + IV G + + + + + + +PL+ L K E ++A+D
Sbjct: 280 GASAIVDGSSVGQVAS---------QTLSNILATRHGVDMPILSPLIGLDKLEITRIAED 330
Query: 187 IGGQDLVNLI 196
IG ++ L
Sbjct: 331 IGTFEISKLD 340
>gi|168210004|ref|ZP_02635629.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens B str. ATCC 3626]
gi|170711837|gb|EDT24019.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens B str. ATCC 3626]
Length = 385
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +++ SGG DS R + Y + E K++ +++ +
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCV---YYHSHPYTSERAKDKVKELAKIVGR 229
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I DI + + ++ + A L+ R
Sbjct: 230 YTEKITLYVVPFTEIQMDIIEKCREDELTIIMRR-------------FMMRVACELSERK 276
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +I G + + +E + S V PL+ + K + +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLMVSNDVSDRPVFRPLIAMDKEDIMDIARD 327
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 328 IDTYETSILPYEDC 341
>gi|169347202|ref|ZP_02866141.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens C str. JGS1495]
gi|169296598|gb|EDS78729.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens C str. JGS1495]
Length = 385
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +++ SGG DS R + Y + E K++ +++ +
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCV---YYHSHPYTSERAKDKVKELAKIVGR 229
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I DI + + ++ + A L+ R
Sbjct: 230 YTEKITLYVVPFTEIQMDIIEKCREDELTIIMRR-------------FMMRVACELSERK 276
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +I G + + +E + S V PL+ + K + +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLMVSNDVSDRPVFRPLIAMDKEDIMDIARD 327
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 328 IDTYETSILPYEDC 341
>gi|110801269|ref|YP_696105.1| thiamine biosynthesis protein ThiI [Clostridium perfringens ATCC
13124]
gi|168216800|ref|ZP_02642425.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens NCTC 8239]
gi|123148743|sp|Q0TQI5|THII_CLOP1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|110675916|gb|ABG84903.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens ATCC 13124]
gi|182381029|gb|EDT78508.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
perfringens NCTC 8239]
Length = 385
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +++ SGG DS R + Y + E K++ +++ +
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCV---YYHSHPYTSERAKDKVKELAKIVGR 229
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I DI + + ++ + A L+ R
Sbjct: 230 YTEKITLYVVPFTEIQMDIIEKCREDELTIIMRR-------------FMMRVACELSERK 276
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I +I G + + +E + S V PL+ + K + +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLMVSNDVSDRPVFRPLIAMDKEDIMDIARD 327
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 328 IDTYETSILPYEDC 341
>gi|167909635|ref|ZP_02496726.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 112]
gi|254196388|ref|ZP_04902812.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei S13]
gi|254296226|ref|ZP_04963683.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 406e]
gi|157805735|gb|EDO82905.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei 406e]
gi|169653131|gb|EDS85824.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
pseudomallei S13]
Length = 510
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 35/93 (37%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
++I G+ + A+ + +
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAHFGYYIAH 325
>gi|259909273|ref|YP_002649629.1| thiamine biosynthesis protein ThiI [Erwinia pyrifoliae Ep1/96]
gi|224964895|emb|CAX56418.1| Thiamine biosynthesis protein ThiI [Erwinia pyrifoliae Ep1/96]
gi|283479328|emb|CAY75244.1| Thiamine biosynthesis protein thiI [Erwinia pyrifoliae DSM 12163]
Length = 482
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 64/192 (33%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +AI + + + K+ D + V R + + A+ +A
Sbjct: 227 --LWKRYGSTHRVRFVAINFE----PVVGEILEKVDDGQMG--VVLKR--MMVRVASQIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K KL
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDLVNL 195
+++IG +D
Sbjct: 328 SREIGTEDFART 339
>gi|326430758|gb|EGD76328.1| GMP synthase [Salpingoeca sp. ATCC 50818]
Length = 662
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 72/211 (34%), Gaps = 43/211 (20%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
S L++ SGG DS+ C + RV L D G RL K++ +
Sbjct: 212 KKSVLVMVSGGVDSAVCAALLNKALGPQRVIALHIDNG-------FMRLDESKQVKVSLE 264
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNII---FLVFAA 120
+ L H++ + +++T+ + + L P R II F+ A
Sbjct: 265 RLGLPL---HVIDASEDFYNGTTTITRKDKSEYETAPLKEVTAPEEKRKIIGDTFIKVAE 321
Query: 121 TLAYRLGI--TNIVIGVCETDYSGYPDCRHDTIRAI----------------ETAINLGM 162
+LGI ++ + R D I + +TA+ +
Sbjct: 322 RAMQQLGIKSDDVYLAQGTL--------RPDLIESASALASSSADAIKTHHNDTALVRKL 373
Query: 163 ESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
V PL K E +L ++G + +
Sbjct: 374 REQGKVVEPLKDYHKDEVRQLGLELGLAEDI 404
>gi|261822521|ref|YP_003260627.1| thiamine biosynthesis protein ThiI [Pectobacterium wasabiae WPP163]
gi|261606534|gb|ACX89020.1| thiamine biosynthesis/tRNA modification protein ThiI
[Pectobacterium wasabiae WPP163]
Length = 482
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K+ D + V R + + A+ +A
Sbjct: 227 LWNRFGSSHRVRFIAIDFDPVVG------EILEKVDDGQMG--VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K K
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKQ 327
Query: 184 AQDIGGQDL 192
A+++G +D
Sbjct: 328 ARELGTEDF 336
>gi|253687428|ref|YP_003016618.1| thiamine biosynthesis/tRNA modification protein ThiI
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259518568|sp|C6DB40|THII_PECCP RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|251754006|gb|ACT12082.1| thiamine biosynthesis/tRNA modification protein ThiI
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 482
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K+ D + V R + + A+ +A
Sbjct: 227 LWNRFGSSHRVRFIAIDFDPVVG------EILEKVDDGQMG--VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K K
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKQ 327
Query: 184 AQDIGGQDL 192
A+++G +D
Sbjct: 328 ARELGTEDF 336
>gi|254173021|ref|ZP_04879695.1| ATPase, PP-loop superfamily [Thermococcus sp. AM4]
gi|214033177|gb|EEB74005.1| ATPase, PP-loop superfamily [Thermococcus sp. AM4]
Length = 306
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++K L++ SGG+DS+ +E L + G
Sbjct: 44 KMLKPDERVLVVVSGGKDSAVTAYILKKLGYNIECLHINLG 84
>gi|205821554|sp|A8F172|MNMA_RICM5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 365
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 1 MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 61 IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVRCNKSVKFRDL 117
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + G +G D + ++ A + + +
Sbjct: 118 I------KTARELGADKLATGHYVRKING--DNGAELYTGLDPAKDQSYFLFTTTKEQLE 169
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL L K ET KLA G
Sbjct: 170 YLRFPLGGLTKDETRKLASKFG 191
>gi|119486550|ref|ZP_01620600.1| hypothetical protein L8106_12405 [Lyngbya sp. PCC 8106]
gi|119456167|gb|EAW37299.1| hypothetical protein L8106_12405 [Lyngbya sp. PCC 8106]
Length = 488
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 32/150 (21%)
Query: 110 GRNIIFLVFAATLAYRLGITNIV-----IGV---------CETDYSGYPDCR---HDTIR 152
R ++F + A AY +G + IG D+S R T+
Sbjct: 236 ARGVVFTLLGAACAYLMGQRTLSVYENGIGAINLPYRASAVGLDHS-----RSVHPLTLL 290
Query: 153 AIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
+ ++ + + V+ P ++L K + + + DLV + + +C R ++
Sbjct: 291 MVSDVVSELLGENFRVYNPFLFLTKAQICRALAENQENDLVAI----TQSC--DSRHRKS 344
Query: 213 EWGYGCNSCPACYLRQKGWM----EFKEKY 238
+ C C +C LR++ E K +Y
Sbjct: 345 QQPTQCGYCSSCILRKQALAASKIEDKTRY 374
>gi|326791227|ref|YP_004309048.1| tRNA sulfurtransferase [Clostridium lentocellum DSM 5427]
gi|326541991|gb|ADZ83850.1| tRNA sulfurtransferase [Clostridium lentocellum DSM 5427]
Length = 393
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 31/194 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS R V+ + F + ++K+V+L K
Sbjct: 183 KATLLLSGGIDSPVAGWMIAKRGVEVDAVYF-----HAPPYTS-DRAKEKVVDLAKKVAI 236
Query: 70 SLG--EDHILPLAILG-DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
G + HI+ + I + + + ++ I + +A +
Sbjct: 237 YTGNMKLHIINFTDIQLKIYERCPHEQLTLIMRR-------------IMMYITEAIAKKN 283
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ G + + +++ + + + V PL+ K E ++A+
Sbjct: 284 GSMGLITGESIGQVAS---------QTMQSLVVTDDAATMPVFRPLIGFDKEEIVQIAKK 334
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 335 IDTFETSILPYEDC 348
>gi|167561630|ref|ZP_02354546.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
oklahomensis EO147]
Length = 510
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 34/93 (36%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAENGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
D+I G+ + + + N
Sbjct: 293 LDNIDDAVYYGEFFEKIDAIDSTIAHFGYYIAN 325
>gi|78776909|ref|YP_393224.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfurimonas denitrificans DSM 1251]
gi|123550559|sp|Q30SP2|MNMA_SULDN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|78497449|gb|ABB43989.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfurimonas denitrificans DSM 1251]
Length = 341
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 69/204 (33%), Gaps = 23/204 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELM 64
+ LL SGG DS+ + + VE L Y + + E +K + +
Sbjct: 1 MSKKVLLGMSGGVDSTVSAMFLKEEGYEVEGL---YMKLHSNPGYHEIHEARARKAADFL 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ H++ L +I + + K PN P R++ F
Sbjct: 58 GI------KLHVIDL---QEIFNEKVFKPFVDTYAKGKTPN---PCALCNRSLKFGEM-L 104
Query: 121 TLAYRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
AY++G + G +TD + + DT + E + PL KK E
Sbjct: 105 KFAYKIGADFVATGHYIKTDGKYFYEADDDTKDQSYFLFYVNKEILPRLLFPLGDRKKSE 164
Query: 180 TWKLAQDIGGQDLVNLILEESHTC 203
+LA I G E S C
Sbjct: 165 IKELAASINGLATFASQRESSEIC 188
>gi|153815338|ref|ZP_01968006.1| hypothetical protein RUMTOR_01572 [Ruminococcus torques ATCC 27756]
gi|145847400|gb|EDK24318.1| hypothetical protein RUMTOR_01572 [Ruminococcus torques ATCC 27756]
Length = 406
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 60/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ SA+LL SGG DS R +E + F + K +
Sbjct: 188 PVGTNGSAMLLLSGGIDSPVAGYMVAKRGVELEAVYF-----HAPPYTSERAKEKVIDLA 242
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ + + + I I + + ++ + A
Sbjct: 243 RLVSAYSGPIKLHIVNFTDIQLAIYEKCPHDELTIIMRRY-------------MMRIAEH 289
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + G +V G + + +++ + V+ PL+ K E
Sbjct: 290 FAKKNGCLGLVTGESIGQVAS---------QTMQSLAATNAVCTLPVYRPLIGFDKKEIV 340
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ I ++ E+
Sbjct: 341 EISEKIDTYEVSIQPFEDC 359
>gi|317501692|ref|ZP_07959883.1| thiamine biosynthesis/tRNA modification protein ThiI
[Lachnospiraceae bacterium 8_1_57FAA]
gi|331088423|ref|ZP_08337338.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 3_1_46FAA]
gi|316896943|gb|EFV19023.1| thiamine biosynthesis/tRNA modification protein ThiI
[Lachnospiraceae bacterium 8_1_57FAA]
gi|330408190|gb|EGG87678.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 394
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 60/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ SA+LL SGG DS R +E + F + K +
Sbjct: 176 PVGTNGSAMLLLSGGIDSPVAGYMVAKRGVELEAVYF-----HAPPYTSERAKEKVIDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ + + + I I + + ++ + A
Sbjct: 231 RLVSAYSGPIKLHIVNFTDIQLAIYEKCPHDELTIIMRRY-------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + G +V G + + +++ + V+ PL+ K E
Sbjct: 278 FAKKNGCLGLVTGESIGQVAS---------QTMQSLAATNAVCTLPVYRPLIGFDKKEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ I ++ E+
Sbjct: 329 EISEKIDTYEVSIQPFEDC 347
>gi|90020152|ref|YP_525979.1| thiamine biosynthesis protein ThiI [Saccharophagus degradans 2-40]
gi|123396662|sp|Q21NG2|THII_SACD2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|89949752|gb|ABD79767.1| thiamine biosynthesis protein [Saccharophagus degradans 2-40]
Length = 483
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ S L L SGG DS+ + R R F+ G R E E + K+I
Sbjct: 175 PMGTQESVLSLISGGYDSTVASFQMIKRGLRTHYCFFNLGGR---EHELAV---KEIAFF 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + G + + K+ +N+ V R + L +A
Sbjct: 229 LWNRFGSTHRVRFISVPFEGVVG------EILQKVGPSNMG--VVLKR--MMLRAGERIA 278
Query: 124 YRLGITNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
R GI +V G V + P + + + V PL+ + K +
Sbjct: 279 ERGGIEAMVTGEAVAQVSSQTIP-----------NLSVIDSVTDMMVLRPLIVMDKRDII 327
Query: 182 KLAQDIGGQDL 192
+++ IG ++
Sbjct: 328 DISRKIGAEEF 338
>gi|167568866|ref|ZP_02361740.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
oklahomensis C6786]
Length = 510
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 34/93 (36%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
++FSGG DS+ L A V +SF N +E+ R C I ++ +
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISFGLPGSNDIEIAHRYCAENGIRHVIYTFTKQDL 292
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
D+I G+ + + + N
Sbjct: 293 LDNIDDAVYYGEFFEKIDAIDSTIAHFGYYIAN 325
>gi|311696298|gb|ADP99171.1| thiamine biosynthesis protein [marine bacterium HP15]
Length = 462
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 27/187 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ L L SGG DSS + R R L F+ G E+ R V
Sbjct: 157 ENVLTLISGGYDSSVAAYLMMRRGLRNHFLFFNLGG-TAHEVGVRQVVHYLWDRYGASHS 215
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ ++ +I S ++ + ++ L+ AA +A +
Sbjct: 216 AKFIS--VPFEGVVAEIMRSVSHRHWGVVLKRQ-------------MLMAAAEIARKNNA 260
Query: 129 TNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V G S + + + S V PL+ + K ++A++I
Sbjct: 261 SGVVTGDAVAQVSS----------QTLSNLNVVDRASDEVVLRPLVSMDKESIIRIAREI 310
Query: 188 GGQDLVN 194
G +
Sbjct: 311 GTEVYAR 317
>gi|313680118|ref|YP_004057857.1| thiamine biosynthesis/tRNA modification protein thii [Oceanithermus
profundus DSM 14977]
gi|313152833|gb|ADR36684.1| thiamine biosynthesis/tRNA modification protein ThiI [Oceanithermus
profundus DSM 14977]
Length = 388
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 63/197 (31%), Gaps = 53/197 (26%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--MPKW 67
++L SGG DS R R + F + +RK + EL + +W
Sbjct: 176 KVVVLISGGIDSPVAAWRMAKRGARPVYVHF-----HSYPHTSLDSLRKTVAELEVLARW 230
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII----FLVFAATLA 123
+++PLA + + + + R ++ A A
Sbjct: 231 HGP-ARLYVVPLA--------DVQEEIFAHSPER--------YRTLLYRRFMYRIAERAA 273
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--------HVTVHTPLMWL 175
R G +V G A+ + +E+ +TV PL+ +
Sbjct: 274 EREGAGALVTG-----------------DALGQVASQTLENLHAVERAVAMTVLRPLIGM 316
Query: 176 KKYETWKLAQDIGGQDL 192
K E AQ IG ++
Sbjct: 317 DKTEVIAEAQRIGTYEI 333
>gi|256372326|ref|YP_003110150.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Acidimicrobium ferrooxidans DSM 10331]
gi|256008910|gb|ACU54477.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Acidimicrobium ferrooxidans DSM 10331]
Length = 341
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 14/133 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS A + V ++ R R C VE
Sbjct: 3 RVVVAMSGGVDSSVAALMAREAGHDVIGVTL----RLTEAAGDRGCCSVGDVEDARTVAA 58
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAYR 125
LG +HI+ A + H ++ + + PN P R + + A A R
Sbjct: 59 LLGINHIV--ADMRAEFHRAVVEPYLDAHRRGWTPN---PCMSCNR-YVKVTALAAWAQR 112
Query: 126 LGITNIVIGVCET 138
LG + +V G T
Sbjct: 113 LGASRLVTGHYAT 125
>gi|225181215|ref|ZP_03734661.1| thiamine biosynthesis/tRNA modification protein ThiI [Dethiobacter
alkaliphilus AHT 1]
gi|225168184|gb|EEG76989.1| thiamine biosynthesis/tRNA modification protein ThiI [Dethiobacter
alkaliphilus AHT 1]
Length = 390
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LLL SGG DS ++ R +E + F + ++K+++L +
Sbjct: 178 KGLLLISGGIDSPVAGWMSMKRGVTLEAIHF-----HSFPFTS-DRAKEKVIDLCRELTR 231
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G+ L +A +I K T R ++F A LA + G
Sbjct: 232 FGGKIR-LHVAHFTEIQKELRLKTPE--------RLTVTLMRRMMF-RIAERLAEQRGAL 281
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + T+ +I + + V PL+ L K E +++ I
Sbjct: 282 ALITGESLGQVAS------QTMESINVIEKVTT---IPVFRPLIGLDKEEIMNISRRIDT 332
Query: 190 QDLVNLILEES 200
+ E+
Sbjct: 333 YPISIRPYEDC 343
>gi|206578238|ref|YP_002237040.1| hypothetical protein KPK_1176 [Klebsiella pneumoniae 342]
gi|206567296|gb|ACI09072.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
Length = 421
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 148 HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGK 207
I ++ ++ + HV + P + K E + D QDL+ +S +C
Sbjct: 262 PMFIDMLQRVLD-NLGIHVQLELPYRFKTKGEMMRECLD---QDLLQKWAADSTSC---- 313
Query: 208 RDKRYEWGYGCNSCPACYLRQKGWMEFK 235
R C C C +R+ ++ +K
Sbjct: 314 GRFRTYNRQHCGRCVPCLIRRAAFIAWK 341
>gi|240102208|ref|YP_002958516.1| P-loop ATPase, MJ1599 type [Thermococcus gammatolerans EJ3]
gi|239909761|gb|ACS32652.1| P-loop ATPase, MJ1599 type [Thermococcus gammatolerans EJ3]
Length = 276
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
+++K A++ +SGG+DS L A + + +E + D+G + +E + + +
Sbjct: 47 ELMKNVDKAIVAYSGGKDSVVALYLAKEVYKVPELEAVMIDHGLMAEEAIENARRIAEHL 106
>gi|160941480|ref|ZP_02088814.1| hypothetical protein CLOBOL_06370 [Clostridium bolteae ATCC
BAA-613]
gi|158435564|gb|EDP13331.1| hypothetical protein CLOBOL_06370 [Clostridium bolteae ATCC
BAA-613]
Length = 288
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 63/184 (34%), Gaps = 50/184 (27%)
Query: 15 FSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
FSGG DSS T A +V ++FD +LE V ++
Sbjct: 38 FSGGVDSSLLLKTAADAAAHTGRKVYAVTFDSRLHPSCDLEIARRVAGELG--------- 88
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII----FLVFAATLAYRL 126
G ++ + +++ ++ N V R + A LA
Sbjct: 89 -GIHEVITVD----------------ELEQESIKNNPV-NRCYLCKRHLFSRLAELAEAR 130
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLKKYETWKLA 184
GI I+ G E D Y R IRA+ + + +PL + + K + LA
Sbjct: 131 GIRYILDGTNEDDMHVY---RPG-IRAL---------KELGIISPLAELHITKAQVKALA 177
Query: 185 QDIG 188
+ G
Sbjct: 178 SEYG 181
>gi|154252635|ref|YP_001413459.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Parvibaculum lavamentivorans DS-1]
gi|154156585|gb|ABS63802.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Parvibaculum lavamentivorans DS-1]
Length = 462
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 16/132 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V ++ Y V + C + I +
Sbjct: 80 RVVVAMSGGVDSSVTAALLKEQGYDVVGITLQLYDHGAAVSRKGACCAGQDIQDARRVAD 139
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D ++ + A P N V R+++
Sbjct: 140 QIGIPHYVLD---YEDRFRRAVMDDFADSYAAGETPIPCVRCNERVKFRDLL------DT 190
Query: 123 AYRLGITNIVIG 134
A LG + G
Sbjct: 191 ARDLGAAALATG 202
>gi|237756395|ref|ZP_04584939.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237691446|gb|EEP60510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 352
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 27/67 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSST + V +S + + E++ ++C K + K
Sbjct: 2 KKVVVGLSGGVDSSTAAFLLKKQGYEVVGISLKFTDIDSCEVDTQVCCSDKDILDAKKVA 61
Query: 69 DSLGEDH 75
+ L H
Sbjct: 62 EFLEIPH 68
>gi|262197371|ref|YP_003268580.1| Queuosine synthesis-like protein [Haliangium ochraceum DSM 14365]
gi|262080718|gb|ACY16687.1| Queuosine synthesis-like protein [Haliangium ochraceum DSM 14365]
Length = 296
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 39/183 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+ FSGG DS+ L A D L+ + + + VE
Sbjct: 32 RVLVAFSGGVDSAFLLKIASDELGADCHALT-----------CVSVTMARSEVEDARALG 80
Query: 69 DSLG---EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
D LG H++ L + + + + A LA +
Sbjct: 81 DELGLAERHHVVESNELEQPGFADNPTHRCALCKTE-------------LMDVARPLAEQ 127
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG+ I IG D + R A E A + M L K + L++
Sbjct: 128 LGVEVIAIGTNIDDLGDF---RPGIAAAKERAARMPMVE--------AGLSKADIRALSR 176
Query: 186 DIG 188
+G
Sbjct: 177 QLG 179
>gi|229826315|ref|ZP_04452384.1| hypothetical protein GCWU000182_01687 [Abiotrophia defectiva ATCC
49176]
gi|229789185|gb|EEP25299.1| hypothetical protein GCWU000182_01687 [Abiotrophia defectiva ATCC
49176]
Length = 360
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
A ++ SGG DSS + V ++ D
Sbjct: 1 MAKKVVVGLSGGVDSSVAAYLLKKQGYEVYGVTMD 35
>gi|209550765|ref|YP_002282682.1| tRNA-specific 2-thiouridylase MnmA [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|226704775|sp|B5ZNK8|MNMA_RHILW RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|209536521|gb|ACI56456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 399
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 54/200 (27%), Gaps = 20/200 (10%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
D + ++ SGG DSS + V ++ Y V C + I
Sbjct: 7 DKQPEETRVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDID 66
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + ++L ++ A P V +
Sbjct: 67 DARRVCETLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLA 123
Query: 122 LAYRLGITNIVIGV-----------CETDYSGYPDCRHDTIRAIETAINLGMESHV--TV 168
A LG + G + Y R ++ +
Sbjct: 124 TAKELGADALATGHYIRSRPNPSPEHPGRRALY---RPADADRDQSYFLFATTQEQIDYL 180
Query: 169 HTPLMWLKKYETWKLAQDIG 188
PL L K ET +LA+++G
Sbjct: 181 RFPLGGLPKAETRRLAEEMG 200
>gi|238754215|ref|ZP_04615572.1| Thiamine biosynthesis protein thiI [Yersinia ruckeri ATCC 29473]
gi|238707462|gb|EEP99822.1| Thiamine biosynthesis protein thiI [Yersinia ruckeri ATCC 29473]
Length = 536
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 227 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 280
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + + + + K++D + V R + + A+ +A
Sbjct: 281 LWNRFGRSHKVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQIA 330
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 331 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 381
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 382 AREIGTEDF 390
>gi|268592053|ref|ZP_06126274.1| thiamine biosynthesis/tRNA modification protein ThiI [Providencia
rettgeri DSM 1131]
gi|291312447|gb|EFE52900.1| thiamine biosynthesis/tRNA modification protein ThiI [Providencia
rettgeri DSM 1131]
Length = 483
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K+I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQIAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +A+ + + + K+ D + V R + + A+ +A
Sbjct: 227 L--WNRFGSSHKVRFIAVNFE----PVVAEILEKVDDGQMG--VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + S V PL+ K KL
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNASDTLVLRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 328 ARQIGTEDF 336
>gi|312135463|ref|YP_004002801.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor owensensis OL]
gi|311775514|gb|ADQ05001.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor owensensis OL]
Length = 360
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ SGG DSS + + V + Q + E E L +R+K +
Sbjct: 1 MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATM---QIWQTETEDEL-IREKSCCSLTA 56
Query: 67 WKDSLGEDHILPLA 80
D+ HIL +
Sbjct: 57 VDDARRVAHILDIP 70
>gi|315195619|gb|EFU26006.1| putative thiamine biosynthesis protein [Staphylococcus aureus
subsp. aureus CGS00]
Length = 407
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 AYAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|283470981|emb|CAQ50192.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus ST398]
Length = 407
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 AYAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|282916975|ref|ZP_06324733.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus D139]
gi|283770793|ref|ZP_06343685.1| thiamine biosynthesis protein thiI [Staphylococcus aureus subsp.
aureus H19]
gi|282319462|gb|EFB49814.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus D139]
gi|283460940|gb|EFC08030.1| thiamine biosynthesis protein thiI [Staphylococcus aureus subsp.
aureus H19]
Length = 407
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 AYAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|257425829|ref|ZP_05602253.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257428495|ref|ZP_05604893.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257431129|ref|ZP_05607506.1| thiamine biosynthesis protein thiI [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433811|ref|ZP_05610169.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257436728|ref|ZP_05612772.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus M876]
gi|282904285|ref|ZP_06312173.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus C160]
gi|282906110|ref|ZP_06313965.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282909025|ref|ZP_06316843.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911341|ref|ZP_06319143.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282914510|ref|ZP_06322296.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus M899]
gi|282919478|ref|ZP_06327213.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus C427]
gi|282924856|ref|ZP_06332522.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus C101]
gi|283958465|ref|ZP_06375916.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus A017934/97]
gi|293503588|ref|ZP_06667435.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus 58-424]
gi|293510604|ref|ZP_06669309.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus M809]
gi|293537145|ref|ZP_06671825.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus M1015]
gi|297590752|ref|ZP_06949390.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus MN8]
gi|257271523|gb|EEV03669.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257275336|gb|EEV06823.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257278077|gb|EEV08725.1| thiamine biosynthesis protein thiI [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281904|gb|EEV12041.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257284079|gb|EEV14202.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus M876]
gi|282313222|gb|EFB43618.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus C101]
gi|282317288|gb|EFB47662.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus C427]
gi|282321691|gb|EFB52016.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus M899]
gi|282325036|gb|EFB55346.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327289|gb|EFB57584.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331402|gb|EFB60916.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282595903|gb|EFC00867.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus C160]
gi|283790614|gb|EFC29431.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus A017934/97]
gi|290919990|gb|EFD97058.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus M1015]
gi|291095254|gb|EFE25519.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus 58-424]
gi|291466495|gb|EFF09016.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus M809]
gi|297575638|gb|EFH94354.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus MN8]
gi|312437828|gb|ADQ76899.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus TCH60]
Length = 407
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 AYAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|49483956|ref|YP_041180.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus MRSA252]
gi|295428285|ref|ZP_06820914.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|56749733|sp|Q6GFZ2|THII_STAAR RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|49242085|emb|CAG40784.1| putative thiamine biosynthesis protein [Staphylococcus aureus
subsp. aureus MRSA252]
gi|295127685|gb|EFG57322.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus EMRSA16]
Length = 407
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 AYAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|268316383|ref|YP_003290102.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Rhodothermus marinus DSM 4252]
gi|262333917|gb|ACY47714.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Rhodothermus marinus DSM 4252]
Length = 382
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 11/136 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY---GQRNKVELECRLCVRK 58
+ + L+ SGG DSS + ++ V ++ DY G R E+ C C +
Sbjct: 1 MSRHGRVLVAMSGGVDSSVTAALLHEQGYEVVGITMKTWDYTSSGVRTGKEVGC--CSLE 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ + I+ + + + + + PN + I
Sbjct: 59 SMNDARAVAVRLGFPHFIVDI---REEFGDWVIERFTEEYLAGRTPNPCILCNTHIKWAA 115
Query: 119 AATLAYRLGITNIVIG 134
A RLG I G
Sbjct: 116 LLRRADRLGCDYIATG 131
>gi|110005219|emb|CAK99545.1| probable thiamine biosynthesis protein [Spiroplasma citri]
Length = 403
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 23/191 (12%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L++ SGG DS + R VE L F + E E V+ + +L +
Sbjct: 184 LVMLSGGIDSPVASFLTMKRGMNVEYLHFA-PPPHTTE-EALQKVKTLVQKLNYYAGQNQ 241
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+++ ++L ++ M I D + R + F A LA L I
Sbjct: 242 QRLYVVNFSML---------QHELMHIPDASYRIII--MRRM-FYRIANLLAKELKCQAI 289
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
+ G + TI +I T + + + P++ K E +A+ I
Sbjct: 290 ITGESLGQVAS------QTIESINTINAVST---LPILRPVLCFDKNEIIDIAKQIDTYQ 340
Query: 192 LVNLILEESHT 202
L E+ +
Sbjct: 341 TSILPFEDCCS 351
>gi|315651065|ref|ZP_07904099.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315486655|gb|EFU77003.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 452
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 76/250 (30%), Gaps = 43/250 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ LFSGG DS L + + E ++++ + S
Sbjct: 144 VSLFSGGLDSYCGAIKLLQEGHSPVLVGHN-------EYPKLRYIQERFCNNFNECYPS- 195
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
L L + ++ +N GR+++FL A ++A +G I
Sbjct: 196 --QKSLFLGFTAGARTPFRLEGERLRKSENTSR-----GRSLLFLCAAISVAGIMG-EQI 247
Query: 132 --------VIGVC-ETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
IG+ S C + ++ I + + + K
Sbjct: 248 PVYIPENGFIGLNVALTNSRKGSCSTRTTHPYFLNSLNKLIA-SVGIQNRIFNFFAFKTK 306
Query: 178 YETWKLAQDIGGQDLVNLILEESHTC-------YLGKRDKRYEWGYGCNSCPACYLRQKG 230
E L + G + +++ +C Y R ++ C C C +R+
Sbjct: 307 REIVNL---VSGTEAFKQGYKDTISCSHPCVSRYN--RVGSRDYPVNCGFCYPCIIRKGS 361
Query: 231 WMEFKEKYQD 240
+ + + D
Sbjct: 362 LQDVELETDD 371
>gi|281201631|gb|EFA75840.1| GMP synthetase [Polysphondylium pallidum PN500]
Length = 689
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 10 SALLLFSGGQDSSTCLS-WALDRF-DRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
L+L SGG DS+ C + A +RV L D G R+ E R+ K++ L
Sbjct: 249 KVLVLVSGGVDSTVCAALIAKAIGPERVIALHIDNGFMRH--EESARVEQALKVLGLRLI 306
Query: 67 WKDS 70
D+
Sbjct: 307 VVDA 310
>gi|212709181|ref|ZP_03317309.1| hypothetical protein PROVALCAL_00214 [Providencia alcalifaciens DSM
30120]
gi|212688093|gb|EEB47621.1| hypothetical protein PROVALCAL_00214 [Providencia alcalifaciens DSM
30120]
Length = 483
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K+I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQIAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +A+ + + + KI D + V R + + A+ +A
Sbjct: 227 L--WNRFGSSHKVRFIAVNFE----PVVAEILEKIDDGQMG--VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + S V PL+ K KL
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNASDTLVLRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 328 ARQIGTEDF 336
>gi|28378907|ref|NP_785799.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum WCFS1]
gi|254557112|ref|YP_003063529.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum JDM1]
gi|300769699|ref|ZP_07079582.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308181108|ref|YP_003925236.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|38258510|sp|Q88UX4|THII_LACPL RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|28271744|emb|CAD64650.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum WCFS1]
gi|254046039|gb|ACT62832.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum JDM1]
gi|300492742|gb|EFK27927.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046599|gb|ADN99142.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 405
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +L+ SGG DS + R +E + F E L K++
Sbjct: 173 PVGTAGKGMLMLSGGIDSPVAGYLGMKRGVDMEMVHFFSPPYTS---EQALAKAKQLAST 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S+ I + + + + K+ + L V R + + +
Sbjct: 230 LASYSGSVK---------FIQIPFTEIQEEIKEKVPEGYLMT--VQRR--LMMRLMDAIT 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I G + + +++ I + + + V P++ + K E K+
Sbjct: 277 RQRHGKAIFNGESLGQVAS---------QTMDSMIAINDVTTLPVLRPVISMDKTEIIKI 327
Query: 184 AQDIGGQDLVNLILEES 200
A+DI DL + E+
Sbjct: 328 AEDIDTYDLSIMPFEDC 344
>gi|304395485|ref|ZP_07377368.1| thiamine biosynthesis/tRNA modification protein ThiI [Pantoea sp.
aB]
gi|304356779|gb|EFM21143.1| thiamine biosynthesis/tRNA modification protein ThiI [Pantoea sp.
aB]
Length = 482
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 65/191 (34%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS L R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+T
Sbjct: 222 QVAHYLWNRFGRSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAAST 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 IAERYGVQALVTGEAVGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDL 192
++A++IG +D
Sbjct: 326 RIAREIGTEDF 336
>gi|222086955|ref|YP_002545489.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
[Agrobacterium radiobacter K84]
gi|254811443|sp|B9J9F7|MNMA_AGRRK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|221724403|gb|ACM27559.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
[Agrobacterium radiobacter K84]
Length = 399
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 53/193 (27%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGILKRQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TIGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130
Query: 129 TNIVIGVC-------ETDYSG----YPDCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
+ G D+ G Y R ++ + PL +
Sbjct: 131 DALATGHYIRSRPNPSADHPGRRALY---RPADADRDQSYFLFATTQEQIDYLRFPLGGM 187
Query: 176 KKYETWKLAQDIG 188
K ET LA+++G
Sbjct: 188 PKAETRALAEEMG 200
>gi|15829189|ref|NP_326549.1| thiamine biosynthesis protein ThiI [Mycoplasma pulmonis UAB CTIP]
gi|20140729|sp|Q98PK4|THII_MYCPU RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|14090133|emb|CAC13891.1| PROBABLE THIAMINE BIOSYNTHESIS PROTEIN THII [Mycoplasma pulmonis]
Length = 379
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 69/201 (34%), Gaps = 29/201 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +L L SGG DS + R +VE L+F E + + ++
Sbjct: 165 PVSSSGKSLHLLSGGIDSPVAAIELMKRGIKVEFLAFVTPPHTD---EKTVNKLMMLKDV 221
Query: 64 MPKWKDSLGEDHILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
K++ + I+ IS S + +A+ + F A +
Sbjct: 222 FNKFQHDSKIHLVNYTKIMNYISLISDQSYKIALMRRS--------------FYRIADKI 267
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A R I I G + + IE+ I + ++++ + PL+ K +
Sbjct: 268 AKRKKIMAISNGENLGQVAS---------QTIESMICISSQTNLLIFRPLLAWNKVDIIN 318
Query: 183 LAQDIGGQDLVNLILEESHTC 203
L Q + + E +C
Sbjct: 319 LGQKYKTYQISTIPASE--SC 337
>gi|319405239|emb|CBI78844.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella sp. AR 15-3]
Length = 409
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 4/129 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS V ++ Y C + I +
Sbjct: 13 ENSRIVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGAATHRVGACCAGQDIEDARR 72
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ +IL + ++ A P V + T AY
Sbjct: 73 VAETLGVPHYILD---YEERFREAVINPFAESYAHGETPIPCVACNQTVKFADLLTTAYE 129
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 130 LGADALATG 138
>gi|14602074|ref|NP_148620.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Aeropyrum pernix K1]
gi|13627227|sp|Q9Y933|GUAA_AERPE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|5106156|dbj|BAA81467.1| GMP synthase [glutamine-hydrolyzing] [Aeropyrum pernix K1]
Length = 512
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 67/199 (33%), Gaps = 41/199 (20%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ SGG DS+ A R+ + D+G + E+E + + ++ +
Sbjct: 221 AVAAVSGGVDSTVAALIAKKAIGSRLYPVFIDHGLHPEGEVERVVKLLSRLG--LEPVMV 278
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
GE+ LA L + + V ++ L A +G
Sbjct: 279 DAGEE---FLAALEGVGDPEEKRRVVGRVYAEVLERA----------------ARDIGAE 319
Query: 130 NIVIGVCETDYSGYPD-----CRH--DTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+V G + YPD R DTI+ L + + + PL + K E
Sbjct: 320 YLVQG------TIYPDVIESGARPGADTIKTHHNVGGLPKDMRLKLVEPLRYFYKDEVRL 373
Query: 183 LAQDIGGQDLVNLILEESH 201
LA+ +G + E
Sbjct: 374 LAEKLG------VPRELIW 386
>gi|157964381|ref|YP_001499205.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia massiliae MTU5]
gi|157844157|gb|ABV84658.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia massiliae MTU5]
Length = 374
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 10 MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 69
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 70 IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVRCNKSVKFRDL 126
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + G +G D + ++ A + + +
Sbjct: 127 I------KTARELGADKLATGHYVRKING--DNGAELYTGLDPAKDQSYFLFTTTKEQLE 178
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL L K ET KLA G
Sbjct: 179 YLRFPLGGLTKDETRKLASKFG 200
>gi|23012016|ref|ZP_00052207.1| COG0482: Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Magnetospirillum magnetotacticum MS-1]
Length = 403
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 60/199 (30%), Gaps = 36/199 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y + C + I + +
Sbjct: 32 RVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACCAGRDIHDARAVAE 91
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L D S+ A P N V R+++ L
Sbjct: 92 TLGIPHYVLD---YEDKFRESVIDRFAESYLSGETPIPCVECNRSVKFRDLL------AL 142
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRH--DTIRAIETAINLGMESHVTVHT---------- 170
A LG + G Y R + R + A++ + ++
Sbjct: 143 ARDLGAEALATGH-------YVASRPLAEGGRGLFRALDPARDQSYFLYATTPEQLAFLR 195
Query: 171 -PLMWLKKYETWKLAQDIG 188
PL K ET LA+++G
Sbjct: 196 FPLGERPKDETRALARELG 214
>gi|307129908|ref|YP_003881924.1| sulfur transfer protein [Dickeya dadantii 3937]
gi|306527437|gb|ADM97367.1| sulfur transfer protein [Dickeya dadantii 3937]
Length = 482
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 63/191 (32%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAIDFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASR 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 IAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDL 192
++A+++G +D
Sbjct: 326 RMARELGTEDF 336
>gi|310658748|ref|YP_003936469.1| thiamine biosynthesis protein thii [Clostridium sticklandii DSM
519]
gi|308825526|emb|CBH21564.1| putative thiamine biosynthesis protein thiI [Clostridium
sticklandii]
Length = 394
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 28/190 (14%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKWKDS 70
+L SGG DS R +E + F + K + + +
Sbjct: 184 ILLSGGIDSPVAAYLMSKRGLYIEAVHF-----HSFPFTSEKSQEKIMDLARTLLPYTGQ 238
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L I I+ + + + + + + A +A
Sbjct: 239 IKIHMVNLLEIQQSIAENCPEELMTILSRR-------------FMMAIAERIATETECNC 285
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
++ G + + + A A+ L + V PL+ K + LA++I
Sbjct: 286 LITGESMGQVAS---QTAEGLLATNNAVKL-----LPVFRPLISYDKEDIITLAKEIDTF 337
Query: 191 DLVNLILEES 200
D+ + E+
Sbjct: 338 DVSIIPEEDC 347
>gi|167629936|ref|YP_001680435.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Heliobacterium modesticaldum Ice1]
gi|205816855|sp|B0TFA7|MNMA_HELMI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|167592676|gb|ABZ84424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Heliobacterium modesticaldum Ice1]
Length = 385
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++ SGG DSS + L++ V ++ ++ E C VE +
Sbjct: 1 MKETVVVAMSGGVDSSVTAALLLEQGYDVIGVTLQIWPKDAPEGAEGGCCSLSAVEDAKR 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
LG H + D + + + + PN
Sbjct: 61 VASKLGVPHYV--LNFRDYFETEVIEYFGREYLAGQTPN 97
>gi|19705225|ref|NP_602720.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|81479885|sp|Q8R5Z5|MNMA2_FUSNN RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|19713176|gb|AAL94019.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 343
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 39/128 (30%), Gaps = 16/128 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ + ++ E + KK+ + +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGITLN---QHLEENSKDIEDTKKVCDKLGIIH 58
Query: 69 DSLGEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + ++ ++S I D+ + +A +
Sbjct: 59 EVVNIRKDFENIVIKYFLEGYNSGKTPSPCIICDDEIK-----------FKILFDIADKY 107
Query: 127 GITNIVIG 134
+ G
Sbjct: 108 NAEYVATG 115
>gi|148253403|ref|YP_001237988.1| tRNA-specific 2-thiouridylase MnmA [Bradyrhizobium sp. BTAi1]
gi|205811320|sp|A5ED38|MNMA_BRASB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|146405576|gb|ABQ34082.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bradyrhizobium sp. BTAi1]
Length = 397
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 54/191 (28%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + C + I + +
Sbjct: 15 RVVVAMSGGVDSSVTAALLKSEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAE 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L D S+ N A P VP R I A
Sbjct: 75 RLGIPHYVLD---YEDRFRESVIDNFAASYASGETP---VPCIECNR-AIKFGDLLKTAR 127
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLMWLKK 177
LG + + G D + A + E + PL + K
Sbjct: 128 ELGASVLATG-HYVASRRLADGSRALVCAADADRDQSYFLFATTREQLDYLRFPLGDMTK 186
Query: 178 YETWKLAQDIG 188
E +LA+ G
Sbjct: 187 PEVRELARRFG 197
>gi|145592083|ref|YP_001154085.1| thiamine biosynthesis protein ThiI [Pyrobaculum arsenaticum DSM
13514]
gi|145283851|gb|ABP51433.1| thiamine biosynthesis/tRNA modification protein ThiI [Pyrobaculum
arsenaticum DSM 13514]
Length = 474
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 59/187 (31%), Gaps = 34/187 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVELMP 65
L L SGG DS + R V+ L + G R+ +E+ RL
Sbjct: 173 KVLALVSGGIDSPVAAWLLMRRGAHVDVLHCNLGGTVALRHTLEVIKRLLAWSYGYNARV 232
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
D L + ++ + + + + R A +A
Sbjct: 233 IIGDCSPVAKALRSGVREELWNIAFKRAL---------------YR------IGAEVAKT 271
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
+ +V G S + ++ M + + PL+ + K E KLAQ
Sbjct: 272 VRAAALVTGESLGQVSS---------QTLQALAAAEMGVGIPILRPLIGMDKDEITKLAQ 322
Query: 186 DIGGQDL 192
IG ++
Sbjct: 323 RIGTYEI 329
>gi|323442980|gb|EGB00602.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus O46]
Length = 402
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 174 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 227
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 228 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 275
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 276 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 326
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 327 GTFETSIQPFEDC 339
>gi|323440740|gb|EGA98449.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus O11]
Length = 402
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 174 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 227
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 228 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 275
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 276 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 326
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 327 GTFETSIQPFEDC 339
>gi|298694984|gb|ADI98206.1| probable thiamine biosynthesis protein [Staphylococcus aureus
subsp. aureus ED133]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|269203353|ref|YP_003282622.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus ED98]
gi|262075643|gb|ACY11616.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus ED98]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|258450890|ref|ZP_05698943.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A5948]
gi|257861426|gb|EEV84234.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A5948]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|258424130|ref|ZP_05687012.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9635]
gi|257845751|gb|EEV69783.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9635]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|253734501|ref|ZP_04868666.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|297207573|ref|ZP_06924008.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|253727555|gb|EES96284.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|296887590|gb|EFH26488.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus ATCC 51811]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|253732365|ref|ZP_04866530.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253723887|gb|EES92616.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|82751303|ref|YP_417044.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus RF122]
gi|123547916|sp|Q2YTF0|THII_STAAB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|82656834|emb|CAI81263.1| probable thiamine biosynthesis protein [Staphylococcus aureus
RF122]
gi|302333380|gb|ADL23573.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|57652013|ref|YP_186598.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus COL]
gi|87160466|ref|YP_494355.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195524|ref|YP_500329.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221821|ref|YP_001332643.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509929|ref|YP_001575588.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221142350|ref|ZP_03566843.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|262049029|ref|ZP_06021907.1| hypothetical protein SAD30_2234 [Staphylococcus aureus D30]
gi|262051801|ref|ZP_06024018.1| hypothetical protein SA930_0463 [Staphylococcus aureus 930918-3]
gi|282924405|ref|ZP_06332078.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9765]
gi|284024762|ref|ZP_06379160.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus 132]
gi|294849876|ref|ZP_06790615.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9754]
gi|304380693|ref|ZP_07363364.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|71153653|sp|Q5HF59|THII_STAAC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|122539305|sp|Q2FXL1|THII_STAA8 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|123485452|sp|Q2FG23|THII_STAA3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|189030659|sp|A6QHP9|THII_STAAE RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|189030660|sp|A8Z2N1|THII_STAAT RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|57286199|gb|AAW38293.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus COL]
gi|87126440|gb|ABD20954.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203082|gb|ABD30892.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374621|dbj|BAF67881.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368738|gb|ABX29709.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|259160295|gb|EEW45322.1| hypothetical protein SA930_0463 [Staphylococcus aureus 930918-3]
gi|259162846|gb|EEW47410.1| hypothetical protein SAD30_2234 [Staphylococcus aureus D30]
gi|269941194|emb|CBI49582.1| putative thiamine biosynthesis protein [Staphylococcus aureus
subsp. aureus TW20]
gi|282592906|gb|EFB97909.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9765]
gi|294823215|gb|EFG39645.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9754]
gi|302751541|gb|ADL65718.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340800|gb|EFM06729.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|315197182|gb|EFU27521.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141658|gb|EFW33493.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus MRSA131]
gi|329314388|gb|AEB88801.1| Probable tRNA sulfurtransferase [Staphylococcus aureus subsp.
aureus T0131]
gi|329727015|gb|EGG63472.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus 21189]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|49486540|ref|YP_043761.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus MSSA476]
gi|56749704|sp|Q6G8L2|THII_STAAS RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|49244983|emb|CAG43444.1| putative thiamine biosynthesis protein [Staphylococcus aureus
subsp. aureus MSSA476]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|21283387|ref|NP_646475.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus MW2]
gi|300911654|ref|ZP_07129098.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus TCH70]
gi|23822241|sp|Q8NW49|THII_STAAW RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|21204827|dbj|BAB95523.1| MW1658 [Staphylococcus aureus subsp. aureus MW2]
gi|300887075|gb|EFK82276.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus TCH70]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|15927292|ref|NP_374825.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus N315]
gi|20140738|sp|Q99TE8|THII_STAAN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|13701510|dbj|BAB42804.1| SA1537 [Staphylococcus aureus subsp. aureus N315]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|15924705|ref|NP_372239.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus Mu50]
gi|156980032|ref|YP_001442291.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus Mu3]
gi|253315110|ref|ZP_04838323.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255006500|ref|ZP_05145101.2| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|258438282|ref|ZP_05689566.1| thiamine biosynthesis protein [Staphylococcus aureus A9299]
gi|258443740|ref|ZP_05692079.1| thiamine biosynthesis protein [Staphylococcus aureus A8115]
gi|282893209|ref|ZP_06301443.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A8117]
gi|296276446|ref|ZP_06858953.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus MR1]
gi|20140679|sp|Q931P5|THII_STAAM RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|189030656|sp|A7X3E5|THII_STAA1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|14247487|dbj|BAB57877.1| probable thiamine biosynthesis protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|156722167|dbj|BAF78584.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|257848326|gb|EEV72317.1| thiamine biosynthesis protein [Staphylococcus aureus A9299]
gi|257851146|gb|EEV75089.1| thiamine biosynthesis protein [Staphylococcus aureus A8115]
gi|282764527|gb|EFC04653.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A8117]
gi|329733109|gb|EGG69446.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus 21193]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|268610563|ref|ZP_06144290.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
flavefaciens FD-1]
Length = 390
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/197 (11%), Positives = 60/197 (30%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+LL SGG DS R + + + + +++ +
Sbjct: 174 PVGSSGKAMLLLSGGIDSPVAGYMMAKRGIHIAAIHYVSPPYTS---DRAQLKVEQLCQK 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + + I I + + + ++ + + A +A
Sbjct: 231 LTAYCGGVAFYCVPFTEIQEAIKDNCPEEFFTIIMRR-------------LMMEIAQRIA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ ++ G + + + + + V P + + K E ++
Sbjct: 278 EKDNCLALITGESVGQVAS---------QTMAAMVCTDAACRIPVFRPCVGMDKTEIIEI 328
Query: 184 AQDIGGQDLVNLILEES 200
A+ I D+ E+
Sbjct: 329 ARKIDTFDISVQPYEDC 345
>gi|325971154|ref|YP_004247345.1| tRNA sulfurtransferase [Spirochaeta sp. Buddy]
gi|324026392|gb|ADY13151.1| tRNA sulfurtransferase [Spirochaeta sp. Buddy]
Length = 399
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 64/198 (32%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVE 62
+ A +LL SGG DS R ++E + F Y + LE + I
Sbjct: 175 PVTTAGKGMLLLSGGIDSPVAAYRMAQRGLKMECIYFHAYPYTSDQALEKVKTLASIIAP 234
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + H++P + Q++ T + R + A +
Sbjct: 235 YLQGTRL-----HVVPFTEAQLW--------IKQHSQEDE---TTLMFR-ASMMKVANAI 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+ + IV G + +E+ S V PL+ + K E
Sbjct: 278 SLQQEGNCIVTGEAL---------SQVASQTLESMSFTDSMSDQLVLRPLVGMNKQEIMD 328
Query: 183 LAQDIGGQDLVNLILEES 200
LA+ IG + L E+
Sbjct: 329 LAKRIGTYETSILPYEDC 346
>gi|91978423|ref|YP_571082.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
BisB5]
gi|91684879|gb|ABE41181.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopseudomonas palustris BisB5]
Length = 402
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + C + I + +
Sbjct: 19 RVVVAMSGGVDSSATAALLKSQGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARAVAE 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R++ F AT A
Sbjct: 79 RIGIPHYVLD---YESRFRESVIDSFADSYALGETP---VPCIECNRSVKFRDLLAT-AR 131
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLMWLKK 177
LG + + G D I A + E + PL + K
Sbjct: 132 ELGASALATG-HYVSSRRLDDGSRALICAADRDRDQSYFLFATTREQLDFLRFPLGDMTK 190
Query: 178 YETWKLAQDIG 188
+T +LA+ G
Sbjct: 191 PQTRELARQFG 201
>gi|148268194|ref|YP_001247137.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus JH9]
gi|150394262|ref|YP_001316937.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
aureus JH1]
gi|257794099|ref|ZP_05643078.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9781]
gi|258415803|ref|ZP_05682074.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9763]
gi|258421960|ref|ZP_05684880.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9719]
gi|258445951|ref|ZP_05694127.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A6300]
gi|258448369|ref|ZP_05696486.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A6224]
gi|258454151|ref|ZP_05702122.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A5937]
gi|282927844|ref|ZP_06335455.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A10102]
gi|295406025|ref|ZP_06815833.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A8819]
gi|297245049|ref|ZP_06928926.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A8796]
gi|189030657|sp|A6U2I2|THII_STAA2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|189030658|sp|A5ITN8|THII_STAA9 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|147741263|gb|ABQ49561.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus JH9]
gi|149946714|gb|ABR52650.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus JH1]
gi|257788071|gb|EEV26411.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9781]
gi|257839396|gb|EEV63869.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9763]
gi|257842004|gb|EEV66433.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A9719]
gi|257855193|gb|EEV78132.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A6300]
gi|257858337|gb|EEV81222.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A6224]
gi|257863603|gb|EEV86360.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A5937]
gi|282590354|gb|EFB95433.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A10102]
gi|285817397|gb|ADC37884.1| Thiamine biosynthesis protein thiI [Staphylococcus aureus 04-02981]
gi|294969022|gb|EFG45043.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A8819]
gi|297178129|gb|EFH37377.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus A8796]
gi|312830093|emb|CBX34935.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315130649|gb|EFT86635.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus CGS03]
gi|329727130|gb|EGG63586.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus 21172]
Length = 407
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKRVNKVVHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|205822155|sp|Q131Q8|MNMA_RHOPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 398
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + C + I + +
Sbjct: 15 RVVVAMSGGVDSSATAALLKSQGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARAVAE 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R++ F AT A
Sbjct: 75 RIGIPHYVLD---YESRFRESVIDSFADSYALGETP---VPCIECNRSVKFRDLLAT-AR 127
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLMWLKK 177
LG + + G D I A + E + PL + K
Sbjct: 128 ELGASALATG-HYVSSRRLDDGSRALICAADRDRDQSYFLFATTREQLDFLRFPLGDMTK 186
Query: 178 YETWKLAQDIG 188
+T +LA+ G
Sbjct: 187 PQTRELARQFG 197
>gi|319642225|ref|ZP_07996884.1| hypothetical protein HMPREF9011_02484 [Bacteroides sp. 3_1_40A]
gi|317386081|gb|EFV67001.1| hypothetical protein HMPREF9011_02484 [Bacteroides sp. 3_1_40A]
Length = 233
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 63/224 (28%), Gaps = 57/224 (25%)
Query: 5 IKKA--PSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIV 61
++K+ +LL+SGG DS W +D+ + L D G + E RL +V
Sbjct: 1 MQKSSYEKKVLLYSGGMDS-----WLIDKIWKPDVKLYVDMGTKYSQEEIKRLPA--DVV 53
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
ED I+PL RN+ + A
Sbjct: 54 VEKLDLSKWEREDKIIPL-------------------------------RNMYLIGIATN 82
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL-------GMESHVTVHTPLMW 174
I +G D D E +N E + ++
Sbjct: 83 YG-----NEICLGATAGDRVL--DKSPVFADIYEQLLNYLYQKQHWTEERKIKINLDFKR 135
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
K E + + ++ S +CY + K C
Sbjct: 136 YTKAELVR--AFVAQGGDMDEAFSSSFSCYTPEHGKECWSCKPC 177
>gi|85713551|ref|ZP_01044541.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrobacter sp. Nb-311A]
gi|85699455|gb|EAQ37322.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrobacter sp. Nb-311A]
Length = 433
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 16/132 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + C + I + +
Sbjct: 48 RVVVAMSGGVDSSVTAALLKSEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAE 107
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L ++ +N A P N V R+++
Sbjct: 108 RLGVPHYVLD---YESRFRETVIENFADSYASGETPVPCIECNRLVKFRDLL------AT 158
Query: 123 AYRLGITNIVIG 134
A LG + G
Sbjct: 159 ARELGAAALATG 170
>gi|330807046|ref|YP_004351508.1| thiamine biosynthesis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375154|gb|AEA66504.1| Putative thiamine biosynthesis protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 484
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 35/188 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R F+ G R EL E + KK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAH-ELGVMEVAHFIWKKYGSSQRVIF 241
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S+ + +L G+I ++ + ++ + L A+ +A RL I
Sbjct: 242 VSVPFEEVL-----GEILGKVDNSHMGVILKR-------------MMLRAASRIADRLQI 283
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P ++ + + + PL+ K + A +
Sbjct: 284 DALVTGEAISQVSSQTLP----------NLSVIDCVTEKLVLR-PLIASHKQDIIDQANE 332
Query: 187 IGGQDLVN 194
IG +
Sbjct: 333 IGTAEFAR 340
>gi|291616532|ref|YP_003519274.1| ThiI [Pantoea ananatis LMG 20103]
gi|291151562|gb|ADD76146.1| ThiI [Pantoea ananatis LMG 20103]
gi|327392963|dbj|BAK10385.1| thiamine biosynthesis protein ThiI [Pantoea ananatis AJ13355]
Length = 482
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYIWNRFGRSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASM 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDL 192
K+A++IG +D
Sbjct: 326 KVAREIGTEDF 336
>gi|57641486|ref|YP_183964.1| ATPase [Thermococcus kodakarensis KOD1]
gi|57159810|dbj|BAD85740.1| predicted ATPase, PP-loop superfamily [Thermococcus kodakarensis
KOD1]
Length = 276
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
++++K A++ +SGG+DS L A + + +E + D+G + +E + + +
Sbjct: 47 ELMEKVDRAIVAYSGGKDSVVALYLAKEVYKVPELEAVMVDHGLMAEEAIENARRMAEAL 106
Query: 61 VELMPKWK 68
L +
Sbjct: 107 GVLFKILR 114
>gi|294783066|ref|ZP_06748390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 1_1_41FAA]
gi|294479944|gb|EFG27721.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 1_1_41FAA]
Length = 343
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/198 (12%), Positives = 52/198 (26%), Gaps = 41/198 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ + ++ E + KK+ + +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLN---QHLEENSKDIEDAKKVCDRLGIIH 58
Query: 69 DSLGEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + ++ + S I D+ + +A +
Sbjct: 59 EVVNIRKDFENIVIKYFLDGYKSGKTPSPCVICDDEIK-----------FKILFEIADKY 107
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIET----------------AINLGMESHVTVHT 170
+ G T + L E +
Sbjct: 108 KADYVATG-HYT--------SVEYSETFSKYLLKSVHSIIKDQSYILYRLAPEKLERLIF 158
Query: 171 PLMWLKKYETWKLAQDIG 188
PL K E ++A IG
Sbjct: 159 PLKPYSKQEIREIALKIG 176
>gi|237739846|ref|ZP_04570327.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 2_1_31]
gi|229423454|gb|EEO38501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 2_1_31]
Length = 343
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/198 (12%), Positives = 52/198 (26%), Gaps = 41/198 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ + ++ E + KK+ + +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLN---QHLEENSKDIEDAKKVCDRLGIIH 58
Query: 69 DSLGEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + ++ + S I D+ + +A +
Sbjct: 59 EVVNIRKDFENIVIKYFLDGYKSGKTPSPCVICDDEIK-----------FKILFEIADKY 107
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIET----------------AINLGMESHVTVHT 170
+ G T + L E +
Sbjct: 108 KADYVATG-HYT--------SVEYSETFSKYLLKSVHSIIKDQSYMLYRLAPEKLERLIF 158
Query: 171 PLMWLKKYETWKLAQDIG 188
PL K E ++A IG
Sbjct: 159 PLKPYSKQEIREIALKIG 176
>gi|295103270|emb|CBL00814.1| thiazole biosynthesis/tRNA modification protein ThiI
[Faecalibacterium prausnitzii SL3/3]
Length = 399
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 63/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + AL + SGG DS R ++ + F E K + +L
Sbjct: 174 PVGTSGRALNMLSGGIDSPVAAYRMAKRGLALDHIHFASPPYTS---ERAKLKVKALAQL 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAAT 121
+ + S + + +N P+ V R + A
Sbjct: 231 ITVYTGSANLFVV--------------PYTKPQEYIRDNAPDVLFTVLMRRSMM-RIANV 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + G +V G + T++A++ + + PL+ + K E
Sbjct: 276 IAKKQGCEALVTGESLAQVAS------QTVKALQ---CTDAAQDLPILRPLIGMDKTEII 326
Query: 182 KLAQDIGGQDLVNLILEES 200
+ ++ I + L E+
Sbjct: 327 ETSRHINTFETSILPYEDC 345
>gi|24373104|ref|NP_717147.1| thiamine biosynthesis protein ThiI [Shewanella oneidensis MR-1]
gi|38372590|sp|Q8EGR4|THII_SHEON RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|24347293|gb|AAN54591.1|AE015599_3 thiamine biosynthesis protein ThiI [Shewanella oneidensis MR-1]
Length = 484
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R F+ G + E+ +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-AQHEIGVKQVAYH----- 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +++ + + + + + V R + + AA +A
Sbjct: 229 --LWKTFGESHKVKFVSVPFEPVVAEILEKIDNGQMG------VVLKR--MMMRTAARIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+GI IV G S T+ + I+ + + + PL+ + K +
Sbjct: 279 ERMGIQAIVTGESLGQVSS------QTLTNLN-VIDRCTD--MLILRPLITMDKQDIINE 329
Query: 184 AQDIGGQDL 192
+ IG +D
Sbjct: 330 CRRIGTEDF 338
>gi|297181386|gb|ADI17576.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase
domain-protein [uncultured alpha proteobacterium
HF0130_06E21]
Length = 454
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 20/145 (13%)
Query: 1 MNDIIKKAPSA----LLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
MN + P A ++ SGG DSS + ++ V ++ Y C
Sbjct: 75 MNSLGFDRPPAETRVVVAMSGGVDSSVTAALLHEQGYDVVGITLQLYDHGAATARFKACC 134
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVP 109
+ I + ++L + +N A P N V
Sbjct: 135 AGQDIYDAYRVADMIGFPHYVLD---YESRFREDVIENFADAYVRGETPIPCVTCNQTVK 191
Query: 110 GRNIIFLVFAATLAYRLGITNIVIG 134
R+++ A LG + G
Sbjct: 192 FRDLV------ATARDLGADALATG 210
>gi|54023992|ref|YP_118234.1| thiamine biosynthesis protein ThiI [Nocardia farcinica IFM 10152]
gi|81375240|sp|Q5YY71|THII_NOCFA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|54015500|dbj|BAD56870.1| putative thiamin biosynthesis protein [Nocardia farcinica IFM
10152]
Length = 410
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 31/186 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPK 66
AL+L SGG DS A+ R + + F Y + + + +++
Sbjct: 181 RALVLLSGGYDSPVAAYRAMRRGLHCDFVHFTGAPY--TDPSSMYKAYALARELGRYQTP 238
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ +++P+ ++ + + + R ++L A LA R
Sbjct: 239 ARL-----YVVPVGNAQKTLATAGAEELQIV------------ARRRLYLRIAEELARRR 281
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G D G + + ++ + V PL+ K E A+
Sbjct: 282 QRDALVTG----DSLG-----QVASQTLSNLVSADQACTLPVLRPLIGWDKQEIITEARR 332
Query: 187 IGGQDL 192
IG ++
Sbjct: 333 IGTAEI 338
>gi|293376361|ref|ZP_06622598.1| thiamine biosynthesis/tRNA modification protein ThiI [Turicibacter
sanguinis PC909]
gi|325843417|ref|ZP_08167975.1| thiamine biosynthesis/tRNA modification protein ThiI [Turicibacter
sp. HGF1]
gi|292645050|gb|EFF63123.1| thiamine biosynthesis/tRNA modification protein ThiI [Turicibacter
sanguinis PC909]
gi|325489339|gb|EGC91713.1| thiamine biosynthesis/tRNA modification protein ThiI [Turicibacter
sp. HGF1]
Length = 409
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 70/221 (31%), Gaps = 47/221 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS R +E + F P +
Sbjct: 179 KGLLMISGGIDSPVAGYLMQKRGVEIEAIHF----------------------ASPPYTS 216
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQD---------NNLPNTF---VPGRNIIFLV 117
+ +L L + +H + + + + N+PN++ V R +
Sbjct: 217 VRSKQKVLDL--MEKNAHYAPVDEINVHVVPFTELQTAIYENIPNSYTMTVMRR--MMYR 272
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A +A + I + G + + + + + +++ + P+ L K
Sbjct: 273 IAEGIAKKREILVLANGESLGQVAS---------QTLASMYAINAVTNMPIIRPVATLDK 323
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
E ++A+ I D+ E+ T ++ + C
Sbjct: 324 NEIIEIAKHIDTYDISIRPYEDCCTVFVPEHPATNPSLEKC 364
>gi|50120073|ref|YP_049240.1| thiamine biosynthesis protein ThiI [Pectobacterium atrosepticum
SCRI1043]
gi|81827199|sp|Q6D841|THII_ERWCT RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|49610599|emb|CAG74044.1| thiamine biosynthesis protein [Pectobacterium atrosepticum
SCRI1043]
Length = 482
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 62/191 (32%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVK 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAIDFDPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 IAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDL 192
K A+++G +D
Sbjct: 326 KQARELGTEDF 336
>gi|253564435|ref|ZP_04841892.1| tRNA-specific 2-thiouridylase mnmA 1 [Bacteroides sp. 3_2_5]
gi|251948211|gb|EES88493.1| tRNA-specific 2-thiouridylase mnmA 1 [Bacteroides sp. 3_2_5]
gi|301161234|emb|CBW20772.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides fragilis 638R]
Length = 364
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE--LECRLCVRKKI 60
+++K LL SGG DSS L+ V ++F Y E + R +
Sbjct: 1 MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAARLG 60
Query: 61 VELMPKWKDSLGEDHILP 78
+ + + ++ I+
Sbjct: 61 IGHITYDARKVFQEQIID 78
>gi|163794310|ref|ZP_02188282.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
proteobacterium BAL199]
gi|159180478|gb|EDP64999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
proteobacterium BAL199]
Length = 394
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 61/197 (30%), Gaps = 25/197 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
+ A ++ SGG DSS + + V ++ Y V + C I +
Sbjct: 16 RSARRVVVAMSGGVDSSVTAALLKEAGYDVVGITLQLYDHGAAVARKGACCAGSDIHDAR 75
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVF 118
+ ++L S+ + A P N V R+++
Sbjct: 76 TVAERLGIPHYVLD---YESRFRESVIDDFADSYLRGETPIPCVRCNQTVKFRDLL---- 128
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI-----ETAINLGM--ESHVTVHTP 171
T A LG + G PD + RA+ ++ E + P
Sbjct: 129 --TTARDLGAEALATG-HYVRRVLGPDG-PELHRAVDPGKDQSYFLFATTPEQLAFLRFP 184
Query: 172 LMWLKKYETWKLAQDIG 188
L + K T A+ +G
Sbjct: 185 LGSMSKEATRDEARRLG 201
>gi|82581552|sp|Q8DNP8|QUEF_STRR6 RecName: Full=NADPH-dependent 7-cyano-7-deazaguanine reductase;
AltName: Full=7-cyano-7-carbaguanine reductase; AltName:
Full=NADPH-dependent nitrile oxidoreductase; AltName:
Full=PreQ(0) reductase
Length = 154
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 29 LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHS 88
+ ++ VE ++F YGQ + +E++ + K + HIL +++LG I+
Sbjct: 1 MQHYETVEAVTFAYGQHHHLEIQITREIAK----------EQGIRHHILDMSLLGQITAQ 50
Query: 89 SLTKNVAMKIQDNNL 103
+ + + L
Sbjct: 51 PDFATIHISYIPDKL 65
>gi|265764899|ref|ZP_06093174.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
gi|263254283|gb|EEZ25717.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
Length = 364
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE--LECRLCVRKKI 60
+++K LL SGG DSS L+ V ++F Y E + R +
Sbjct: 1 MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAARLG 60
Query: 61 VELMPKWKDSLGEDHILP 78
+ + + ++ I+
Sbjct: 61 IGHITYDARKVFQEQIID 78
>gi|60679769|ref|YP_209913.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis NCTC
9343]
gi|81317158|sp|Q5LIS5|MNMA1_BACFN RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|60491203|emb|CAH05951.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides fragilis NCTC 9343]
Length = 364
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE--LECRLCVRKKI 60
+++K LL SGG DSS L+ V ++F Y E + R +
Sbjct: 1 MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAARLG 60
Query: 61 VELMPKWKDSLGEDHILP 78
+ + + ++ I+
Sbjct: 61 IGHITYDARKVFQEQIID 78
>gi|53711506|ref|YP_097498.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis YCH46]
gi|81383903|sp|Q64ZW2|MNMA1_BACFR RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|52214371|dbj|BAD46964.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bacteroides fragilis YCH46]
Length = 364
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE--LECRLCVRKKI 60
+++K LL SGG DSS L+ V ++F Y E + R +
Sbjct: 1 MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAARLG 60
Query: 61 VELMPKWKDSLGEDHILP 78
+ + + ++ I+
Sbjct: 61 IGHITYDARKVFQEQIID 78
>gi|317178374|dbj|BAJ56162.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori F30]
Length = 342
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 58/186 (31%), Gaps = 41/186 (22%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+L SGG DSS ++ + + Y ++L ++ K + LG
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---Y-----LKLHASEKKHDLYIKNTQKACEFLG 56
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLGIT 129
L + S++ ++ PN P N + A A +LG
Sbjct: 57 IP--LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDYALKLGCE 111
Query: 130 NIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PLMW 174
I G V E D Y I+ A++ + ++ PL
Sbjct: 112 KIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPLGD 161
Query: 175 LKKYET 180
L K +
Sbjct: 162 LLKKDI 167
>gi|256827205|ref|YP_003151164.1| thiazole biosynthesis/tRNA modification protein ThiI
[Cryptobacterium curtum DSM 15641]
gi|256583348|gb|ACU94482.1| thiazole biosynthesis/tRNA modification protein ThiI
[Cryptobacterium curtum DSM 15641]
Length = 410
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 54/185 (29%), Gaps = 25/185 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + + L S G DS L R + F + + +
Sbjct: 177 PVGSSGRVVALLSSGIDSPVALWRMARRGAVCIAVHFS----GRPQTSATSEFLVDDIAH 232
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + +++P + +A+ + + R + A +A
Sbjct: 233 LLEHDGCIARVYVVPFG--------DYQREIALTVAPELRVIMY---R-RLMFKVAEAIA 280
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +V G + + I+ ++ + PL+ K E
Sbjct: 281 NQEGARALVTGESLGQVAS---------QTIDNIFATASAVNLPIFRPLIGTDKQEIIAD 331
Query: 184 AQDIG 188
AQ +G
Sbjct: 332 AQRLG 336
>gi|83816248|ref|YP_446592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salinibacter ruber DSM 13855]
gi|123528021|sp|Q2RZN9|MNMA_SALRD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|83757642|gb|ABC45755.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salinibacter ruber DSM 13855]
Length = 383
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 65/209 (31%), Gaps = 26/209 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY---GQRNKVELECRLCVRK 58
+ K L+ SGG DSS +R V L+ DY G R+ E+ C C +
Sbjct: 1 MSKKGRVLVAMSGGVDSSVTAVLLKERGYDVVGLTMKTWDYSTSGGRDGKEVGC--CSIE 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ + + ++ L + + + + PN V I
Sbjct: 59 SMNDARVVATEHGFPHFVVDL---REEFGDWVIERFTDEYLSGRTPNPCVLCNTHIKWDA 115
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-------- 170
A L I G Y D R + + ++ + +
Sbjct: 116 LLQRADDLDCEYIATGHYAN--VRYDDERDRYL--LSRGLDRNKDQSYALWGLPQEHLAR 171
Query: 171 ---PLMWLKKYETWKLAQDIGGQDLVNLI 196
PL +K E ++A + G ++ +
Sbjct: 172 SIFPLGAYEKPEIREMAAEFGLDNVADKP 200
>gi|198274529|ref|ZP_03207061.1| hypothetical protein BACPLE_00677 [Bacteroides plebeius DSM 17135]
gi|198272583|gb|EDY96852.1| hypothetical protein BACPLE_00677 [Bacteroides plebeius DSM 17135]
Length = 233
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 63/224 (28%), Gaps = 57/224 (25%)
Query: 5 IKKA--PSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIV 61
++K+ +LL+SGG DS W +D+ + L D G + E RL +V
Sbjct: 1 MQKSSYEKKVLLYSGGMDS-----WLIDKIWKPDVKLYVDMGTKYSQEEIKRLPA--DVV 53
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
ED I+PL RN+ + A
Sbjct: 54 VEKLDLSKWEREDKIIPL-------------------------------RNMYLIGIATN 82
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL-------GMESHVTVHTPLMW 174
I +G D D E +N E + ++
Sbjct: 83 YG-----NEICLGATAGDRVL--DKSPVFADIYEQLLNYLYQKQHWTEERKIKINLDFKR 135
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
K E + I ++ S +CY + K C
Sbjct: 136 YTKAELVR--AFIAQGGDMDEAFSSSFSCYTPEHGKECWSCKPC 177
>gi|308185893|ref|YP_003930024.1| Thiamine biosynthesis protein thiI [Pantoea vagans C9-1]
gi|308056403|gb|ADO08575.1| Thiamine biosynthesis protein thiI [Pantoea vagans C9-1]
Length = 482
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 65/191 (34%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS L R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+T
Sbjct: 222 QVAHYLWNRFGRSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAAST 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEAVGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDL 192
++A++IG +D
Sbjct: 326 RVAREIGTEDF 336
>gi|295092929|emb|CBK82020.1| thiazole biosynthesis/tRNA modification protein ThiI [Coprococcus
sp. ART55/1]
Length = 395
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 58/189 (30%), Gaps = 29/189 (15%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKWKDSL 71
L SGG DS R VE + F + +K + L+ + ++
Sbjct: 185 LLSGGIDSPVAAYMIAKRGVVVEAVYF-----HAPPFTSERAKQKVIDLACLVANYSGAI 239
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ + I + + + + ++ + A LA +
Sbjct: 240 RLHVVNFADVQMAIYDNCPHEELTIIMKRY-------------MIKIAEELAEKNDCQCT 286
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
+ G S T+ ++ + + V P + + K E +++ IG +
Sbjct: 287 ITGESIGQVSS------QTVFSLNVINQVST---MPVFRPCIGMDKQEIVDISEKIGTYE 337
Query: 192 LVNLILEES 200
L E+
Sbjct: 338 TSILPYEDC 346
>gi|222055075|ref|YP_002537437.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sp. FRC-32]
gi|221564364|gb|ACM20336.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sp. FRC-32]
Length = 370
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 44/138 (31%), Gaps = 7/138 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRL-CV 56
MN K ++ SGG DSS + ++ V +S DYG+ E E C
Sbjct: 1 MNKE-KSKKRVVIAMSGGVDSSVSAALLQEQGFEVIGISMQVWDYGKFAAAEGEKFDTCC 59
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+ + + LG + D + K+ + PN V I
Sbjct: 60 SLDDIHDARRVAEQLGIPFYVV--NFEDEFEDLVIKDFVDEYLKGRTPNPCVRCNQWIKF 117
Query: 117 VFAATLAYRLGITNIVIG 134
A LG I G
Sbjct: 118 ELLLKKARGLGADFIATG 135
>gi|110634566|ref|YP_674774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mesorhizobium sp. BNC1]
gi|123353475|sp|Q11G66|MNMA_MESSB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|110285550|gb|ABG63609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chelativorans sp. BNC1]
Length = 391
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 52/191 (27%), Gaps = 15/191 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+A ++ SGG DSS V ++ Y V C + I +
Sbjct: 11 EATRVVVAMSGGVDSSVVAGLLAREGYEVVGVTLQLYDHGAAVHRAGSCCAGQDIDDARR 70
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++L + ++ A P V + A
Sbjct: 71 VAETLGIAHYVLD---YEERFRKAVIDPFAESYVTGETPIPCVACNQTVKFSDLLETARE 127
Query: 126 LGITNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKK 177
LG + G + Y R ++ + PL + K
Sbjct: 128 LGADALATGHYIRSRANGAHRALY---RPVDADRDQSYFLFATTQEQIDYLRFPLGGMSK 184
Query: 178 YETWKLAQDIG 188
+ +A+++G
Sbjct: 185 PQVRAIAEEMG 195
>gi|242398342|ref|YP_002993766.1| Probable thiamine biosynthesis protein thiI [Thermococcus sibiricus
MM 739]
gi|242264735|gb|ACS89417.1| Probable thiamine biosynthesis protein thiI [Thermococcus sibiricus
MM 739]
Length = 382
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 64/190 (33%), Gaps = 24/190 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SG DSS + R V + G E L +KI + K+
Sbjct: 182 KVMALLSGSIDSSVAAFLMMKRGCEVIPVHIYVG-------EKTLEKVRKIWNQLKKYHY 234
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
D I+ + +++ N F + + A +A G
Sbjct: 235 GGKSDLIVIKPQERE-----KIIQTLKQLKKENYTCVFCKY---MMIKKADEIAREFGAK 286
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV+G D G + +E + S + ++ PL+ + K E +A+ I
Sbjct: 287 GIVMG----DSLG-----QVASQTLENMYIVSQASDLPIYRPLVGMDKEEIVAIAKTIRT 337
Query: 190 QDLVNLILEE 199
+L L +E
Sbjct: 338 FELSTLPEDE 347
>gi|18977994|ref|NP_579351.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
furiosus DSM 3638]
gi|18893773|gb|AAL81746.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
3638]
Length = 261
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+L+SGG DSS L +V L+F
Sbjct: 20 NKRVLVLYSGGIDSSVTLYVLKKAGFKVSALTF 52
>gi|160946023|ref|ZP_02093249.1| hypothetical protein FAEPRAM212_03556 [Faecalibacterium prausnitzii
M21/2]
gi|158443754|gb|EDP20759.1| hypothetical protein FAEPRAM212_03556 [Faecalibacterium prausnitzii
M21/2]
Length = 418
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 63/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + AL + SGG DS R ++ + F E K + +L
Sbjct: 193 PVGTSGRALNMLSGGIDSPVAAYRMAKRGLALDHIHFASPPYTS---ERAKLKVKALAQL 249
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAAT 121
+ + S + + +N P+ V R + A
Sbjct: 250 ITVYTGSANLFVV--------------PYTKPQEYIRDNAPDVLFTVLMRRSMM-RIANV 294
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + G +V G + T++A++ + + PL+ + K E
Sbjct: 295 IAKKQGCEALVTGESLAQVAS------QTVKALQ---CTDAAQDLPILRPLIGMDKTEII 345
Query: 182 KLAQDIGGQDLVNLILEES 200
+ ++ I + L E+
Sbjct: 346 ETSRHINTFETSILPYEDC 364
>gi|325981798|ref|YP_004294200.1| argininosuccinate synthase [Nitrosomonas sp. AL212]
gi|325531317|gb|ADZ26038.1| argininosuccinate synthase [Nitrosomonas sp. AL212]
Length = 404
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+KK A+L FSGG D+S L W D + V T + D GQ +VE + + E+
Sbjct: 1 MKKINKAVLAFSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEVEPARAKAKQLGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIDDLREEFVRDFVFPMFRANTIYEGEYLLGTSIA 95
>gi|212224868|ref|YP_002308104.1| ATPase [Thermococcus onnurineus NA1]
gi|212009825|gb|ACJ17207.1| ATPase [Thermococcus onnurineus NA1]
Length = 305
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRK 58
++K L++ SGG+DS+ +E L + G E R C
Sbjct: 44 KLLKPDERVLVVVSGGKDSAVTAYVLKKLGYDIECLHINLGIGEYSEKSEEYAKRQCEAL 103
Query: 59 KIVELMPKWKDSLGE 73
+ + + K+ LG
Sbjct: 104 GVPLHIVRVKELLGH 118
>gi|294508524|ref|YP_003572583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1
[Salinibacter ruber M8]
gi|294344853|emb|CBH25631.1| Probable tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
1 [Salinibacter ruber M8]
Length = 383
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 65/209 (31%), Gaps = 26/209 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY---GQRNKVELECRLCVRK 58
+ K L+ SGG DSS +R V L+ DY G R+ E+ C C +
Sbjct: 1 MSKKGRVLVAMSGGVDSSVTAVLLKERGYDVVGLTMKTWDYSTSGGRDGKEVGC--CSIE 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ + + ++ L + + + + PN V I
Sbjct: 59 SMNDARVVATEHGFPHFVVDL---REEFGDWVIERFTDEYLSGRTPNPCVLCNTHIKWDA 115
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-------- 170
A L I G Y D R + + ++ + +
Sbjct: 116 LLQRADDLDCEYIATGHYAN--VRYDDERDRYL--LSRGLDRNKDQSYALWGLPQEHLAR 171
Query: 171 ---PLMWLKKYETWKLAQDIGGQDLVNLI 196
PL +K E ++A + G ++ +
Sbjct: 172 SIFPLGAYEKPEIREMAAEFGLDNVADKP 200
>gi|242398445|ref|YP_002993869.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
gi|242264838|gb|ACS89520.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
Length = 302
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++K + L++ SGG+DS+ VE L + G
Sbjct: 42 KLLKASEKVLVVISGGKDSAVTAYVLKKLGYDVECLHINLG 82
>gi|320143812|gb|EFW35585.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus aureus subsp. aureus MRSA177]
Length = 407
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHF-----HSPPFTS-DQAKEKVIELTRILAE 232
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G + HI+P L + + + +T R ++ A L +++G
Sbjct: 233 RVGPIKLHIVPFTEL-------QKQVNKVLHPRYTMTST----RRMMM-RVADKLVHQIG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + + V PL+ K E +++I
Sbjct: 281 ALAIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEI 331
Query: 188 GGQDLVNLILEES 200
G + E+
Sbjct: 332 GTFETSIQPFEDC 344
>gi|227327514|ref|ZP_03831538.1| thiamine biosynthesis protein ThiI [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 482
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K+ D + V R + + A+ +A
Sbjct: 227 LWNRFGSSHRVRFIAIDFDPVVG------EILEKVDDGQMG--VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K K
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKQ 327
Query: 184 AQDIGGQDL 192
A+++G +D
Sbjct: 328 ARELGTEDF 336
>gi|227113451|ref|ZP_03827107.1| thiamine biosynthesis protein ThiI [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 482
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K+ D + V R + + A+ +A
Sbjct: 227 LWNRFGSSHRVRFIAIDFDPVVG------EILEKVDDGQMG--VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K K
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKQ 327
Query: 184 AQDIGGQDL 192
A+++G +D
Sbjct: 328 ARELGTEDF 336
>gi|269925445|ref|YP_003322068.1| argininosuccinate synthase [Thermobaculum terrenum ATCC BAA-798]
gi|269789105|gb|ACZ41246.1| argininosuccinate synthase [Thermobaculum terrenum ATCC BAA-798]
Length = 403
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV-E 62
++K +L +SGG D+S L+W + + V + D GQ +VE + +
Sbjct: 1 MEKIKKVVLAYSGGLDTSVILAWIKENYGAEVIAFTADVGQGEEVEEAKQKALATGASKA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D + P+ + + ++
Sbjct: 61 YALDLREEFVRDFVFPVIRAAAVYENQYLMGTSIA 95
>gi|254492519|ref|ZP_05105691.1| argininosuccinate synthase [Methylophaga thiooxidans DMS010]
gi|224462411|gb|EEF78688.1| argininosuccinate synthase [Methylophaga thiooxydans DMS010]
Length = 403
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S L W D++D V T + D GQ +VE I E+
Sbjct: 1 MSKINKVVLAYSGGLDTSVILKWLQDKYDSEVVTFTADLGQGEEVEPARAKAKSLGIKEI 60
Query: 64 M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D++ P+ I ++
Sbjct: 61 FIEDLREEFARDYVFPMFRANAIYEGEYLLGTSIA 95
>gi|257463089|ref|ZP_05627490.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. D12]
gi|317060688|ref|ZP_07925173.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D12]
gi|313686364|gb|EFS23199.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D12]
Length = 345
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--NKVELECRLCVRKKI 60
+L SGG DS+ V + F + EL+ + K
Sbjct: 1 MKEKVILGMSGGVDSAVAAYLLQKEGYEVIAVHFSVHNTEATQKELQDCQKIADKF 56
>gi|24638328|sp|Q98HL0|MNMA_RHILO RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 396
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 50/191 (26%), Gaps = 15/191 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS V ++ Y C + I +
Sbjct: 11 ENTRIVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRAGSCCAGQDIDDARR 70
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++L + ++ A P V + A
Sbjct: 71 VSETLGIPHYVLD---YEERFRKAVIDPFAESYVAGETPIPCVSCNQTVKFADLLATAKE 127
Query: 126 LGITNIVI------GVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKK 177
LG + G + Y R ++ + PL L K
Sbjct: 128 LGADALATGHYIRSGANGAHRALY---RPVDADRDQSYFLFATTQAQIDYLRFPLGGLSK 184
Query: 178 YETWKLAQDIG 188
+ +A+++G
Sbjct: 185 PQVRAIAEEMG 195
>gi|289548750|ref|YP_003473738.1| tRNA methyl transferase-like protein [Thermocrinis albus DSM 14484]
gi|289182367|gb|ADC89611.1| tRNA methyl transferase-like protein [Thermocrinis albus DSM 14484]
Length = 346
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 3/128 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+ L SGG DSS + D+ ++ L F Y E + RL +R++ +
Sbjct: 1 MKVRAVALLSGGLDSSLAVRLLQDQGVEIKALHF-YTGFCITEHKRRLGLRREDGQQYVN 59
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+P+ I+ DIS + + K N V R I+ L A + +
Sbjct: 60 PALRAAAQLGVPIEIV-DISKEYIHVLLNPKYGYGKNVNPCVDCR-IMMLRKAKEIMEKE 117
Query: 127 GITNIVIG 134
G +V G
Sbjct: 118 GYQFVVTG 125
>gi|260462497|ref|ZP_05810704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mesorhizobium opportunistum WSM2075]
gi|259031693|gb|EEW32962.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mesorhizobium opportunistum WSM2075]
Length = 396
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 50/191 (26%), Gaps = 15/191 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS V ++ Y C + I +
Sbjct: 11 ENTRIVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRAGSCCAGQDIDDARR 70
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++L + ++ A P V + A
Sbjct: 71 VSETLGIPHYVLD---YEERFRKAVIDPFAESYVAGETPIPCVSCNQTVKFADLLATAKE 127
Query: 126 LGITNIVI------GVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKK 177
LG + G + Y R ++ + PL L K
Sbjct: 128 LGADALATGHYIRSGANGAHRALY---RPVDADRDQSYFLFATTQAQIDYLRFPLGGLSK 184
Query: 178 YETWKLAQDIG 188
+ +A+++G
Sbjct: 185 PQVRAIAEEMG 195
>gi|308274462|emb|CBX31061.1| tRNA-specific 2-thiouridylase mnmA [uncultured Desulfobacterium
sp.]
Length = 354
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 37/207 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQ-------RNKVELECRLCVR 57
K A+ L SGG DS ++ V + F Y +N EL+ +
Sbjct: 2 KEKIAIAL-SGGVDSLVAAYLLKNQGYDVTGIHFITGYEHGKVQDSGKNNPELQKITQLA 60
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
K+I E+ ++ D + + + + T N + I + ++ V
Sbjct: 61 KQI-EINIEFFDCRTQFKQIVINYFTQTYKAGKTPNPCI-ICNQSIKFGVV--------- 109
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI-------ETAINLGMESHVTVHT 170
A ++G T + G +G R + + + L M S +
Sbjct: 110 --LEFAKKIGCTFLATGHYAGKMTG----RDGMFHLLKGADTKKDQSYFLSMLSQKQLSC 163
Query: 171 ---PLMWLKKYETWKLAQDIGGQDLVN 194
PL K E +L+++ G V
Sbjct: 164 AIFPLYGFTKKEVIRLSEEKGLHPAVQ 190
>gi|315452550|ref|YP_004072820.1| Arginino succinate synthase [Helicobacter felis ATCC 49179]
gi|315131602|emb|CBY82230.1| Arginino succinate synthase [Helicobacter felis ATCC 49179]
Length = 352
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V L F+ G
Sbjct: 2 KALALFSGGLDSLLSMHLVASQGIEVIALHFNIG 35
>gi|113971061|ref|YP_734854.1| thiamine biosynthesis protein ThiI [Shewanella sp. MR-4]
gi|123130220|sp|Q0HGM0|THII_SHESM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|113885745|gb|ABI39797.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
sp. MR-4]
Length = 484
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R F+ G + E+ +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-AQHEIGVKQVAYH----- 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +++ + + + + + V R + + AA +A
Sbjct: 229 --LWKTYGESHKVKFVSVPFEPVVAEILEKIDNGQMG------VVLKR--MMMRTAARIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+GI IV G S T+ + I+ + + + PL+ + K +
Sbjct: 279 ERMGIQAIVTGESLGQVSS------QTLTNLN-VIDRCTD--MLILRPLIAMDKQDIINE 329
Query: 184 AQDIGGQDL 192
+ IG +D
Sbjct: 330 CRRIGTEDF 338
>gi|114048291|ref|YP_738841.1| thiamine biosynthesis protein ThiI [Shewanella sp. MR-7]
gi|122944502|sp|Q0HSX1|THII_SHESR RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|113889733|gb|ABI43784.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
sp. MR-7]
Length = 484
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R F+ G + E+ +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-AQHEIGVKQVAYH----- 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +++ + + + + + V R + + AA +A
Sbjct: 229 --LWKTYGESHKVKFVSVPFEPVVAEILEKIDNGQMG------VVLKR--MMMRTAARIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+GI IV G S T+ + I+ + + + PL+ + K +
Sbjct: 279 ERMGIQAIVTGESLGQVSS------QTLTNLN-VIDRCTD--MLILRPLIAMDKQDIINE 329
Query: 184 AQDIGGQDL 192
+ IG +D
Sbjct: 330 CRRIGTEDF 338
>gi|117921337|ref|YP_870529.1| thiamine biosynthesis protein ThiI [Shewanella sp. ANA-3]
gi|189030653|sp|A0KZA4|THII_SHESA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|117613669|gb|ABK49123.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
sp. ANA-3]
Length = 484
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R F+ G + E+ +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-AQHEIGVKQVAYH----- 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +++ + + + + + V R + + AA +A
Sbjct: 229 --LWKTYGESHKVKFVSVPFEPVVAEILEKIDNGQMG------VVLKR--MMMRTAARIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+GI IV G S T+ + I+ + + + PL+ + K +
Sbjct: 279 ERMGIQAIVTGESLGQVSS------QTLTNLN-VIDRCTD--MLILRPLIAMDKQDIINE 329
Query: 184 AQDIGGQDL 192
+ IG +D
Sbjct: 330 CRRIGTEDF 338
>gi|255522140|ref|ZP_05389377.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
J1-175]
Length = 272
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L+ SGG DS A R +E + F + ++K V+L
Sbjct: 173 PVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHF-----HSPPYTSEQ-AKQKAVDL 226
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKI 98
K G+ HI+P + ++ + ++V M +
Sbjct: 227 AAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTV 263
>gi|317014725|gb|ADU82161.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori
Gambia94/24]
Length = 342
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 58/184 (31%), Gaps = 37/184 (20%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALQLG 109
Query: 128 ITNIVIG----VCETDYSGYP----DCRHD---TIRAIETAINLGMESHVTVHTPLMWLK 176
I G V E D Y D D + A+E E + PL L
Sbjct: 110 CEKIATGHYARVKEIDRVSYIQEAVDKTKDQSYFLYALEH------EVIAKLVFPLGDLL 163
Query: 177 KYET 180
K +
Sbjct: 164 KKDI 167
>gi|313204364|ref|YP_004043021.1| argininosuccinate synthase [Paludibacter propionicigenes WB4]
gi|312443680|gb|ADQ80036.1| argininosuccinate synthase [Paludibacter propionicigenes WB4]
Length = 399
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 18/132 (13%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
LL FSGG D S + A ++ V T + G ++ EL+ ++
Sbjct: 1 MKEKVLLAFSGGLDTSFCAMYLAQEKGYEVHTAVANTGGFSEDELKVIEDKAFRLGAKSH 60
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + + + G++ + + + IF A
Sbjct: 61 VALDVTQEYYEKSIKYMVFGNVLRN---GTYPISVSSER-----------IFQAIAIINY 106
Query: 123 AYRLGITNIVIG 134
A +G + G
Sbjct: 107 AKEIGADYVAHG 118
>gi|197335100|ref|YP_002155479.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
fischeri MJ11]
gi|226729110|sp|B5FBH1|THII_VIBFM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|197316590|gb|ACH66037.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
fischeri MJ11]
Length = 482
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V L F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYLFFNLGG------PAHEIGVKQVSHF 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K S + + + ++ + K+ D + + R +F+ +A
Sbjct: 227 LWKKYGSSAKVKFISVDFDPVVA------EILEKVDDGQMG--VILKR--MFMRAGGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFGIEGLVTGEALGQVSS---------QTLTNLRHIDNVTDSLILRPLINWDKEDIIDL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|59711323|ref|YP_204099.1| thiamine biosynthesis protein ThiI [Vibrio fischeri ES114]
gi|71658007|sp|Q5E6Y5|THII_VIBF1 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|59479424|gb|AAW85211.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Vibrio fischeri ES114]
Length = 482
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V L F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYLFFNLGG------PAHEIGVKQVSHF 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K S + + + ++ + K+ D + + R +F+ +A
Sbjct: 227 LWKKYGSSAKVKFISVDFDPVVA------EILEKVDDGQMG--VILKR--MFMRAGGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFGIEGLVTGEALGQVSS---------QTLTNLRHIDNVTDSLILRPLINWDKEDIIDL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|237750858|ref|ZP_04581338.1| tRNA methyltransferase [Helicobacter bilis ATCC 43879]
gi|229373303|gb|EEO23694.1| tRNA methyltransferase [Helicobacter bilis ATCC 43879]
Length = 354
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKI-V 61
+ KK SA+ LFSGG DS + ++ +V L+F+ G NK + E K++
Sbjct: 1 MTKKQISAVALFSGGLDSMISMQLLHEQGIKVYALNFNIGFGSNKDKSEYFYNAAKQVGA 60
Query: 62 ELMPKWKDSLGEDHILPLAILG 83
EL+ D+IL G
Sbjct: 61 ELIQINIAKQFFDNILFKPQYG 82
>gi|260776525|ref|ZP_05885420.1| thiamine biosynthesis protein ThiI [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607748|gb|EEX34013.1| thiamine biosynthesis protein ThiI [Vibrio coralliilyticus ATCC
BAA-450]
Length = 482
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISIDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A+DIG +D
Sbjct: 328 ARDIGTEDF 336
>gi|302389695|ref|YP_003825516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermosediminibacter oceani DSM 16646]
gi|302200323|gb|ADL07893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermosediminibacter oceani DSM 16646]
Length = 364
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSSTC + V ++
Sbjct: 5 KNRVVVAMSGGVDSSTCAYLLKKQGYEVIGIT 36
>gi|260495095|ref|ZP_05815224.1| tRNA methyl transferase [Fusobacterium sp. 3_1_33]
gi|260197538|gb|EEW95056.1| tRNA methyl transferase [Fusobacterium sp. 3_1_33]
Length = 343
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 75/247 (30%), Gaps = 58/247 (23%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKW 67
++ SGG DSS ++ V ++ + Y + N ++E V K+ +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQYLEENSKDIEDTKKVCDKLGIIHEVV 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++I+ L + S I D+ + +A +
Sbjct: 62 NIRKDFENIVIKYFLD--GYKSGKTPSPCVICDDEIK-----------FKILFDIADKYK 108
Query: 128 ITNIVIG-VCETDYSGYPDCRHDT-----------IRAIETAINLGMESHV-TVHTPLMW 174
+ G +YS I+ + + + + PL +
Sbjct: 109 AEYVATGHYTSVEYS------EIFSKYLLKSVHSIIKDQSYMLYRLSPNKLERLIFPLKY 162
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K E ++A +G + Y K + C A ++G+ EF
Sbjct: 163 YTKQEIREIALKLGLEI------------YNKKDSQ--------GICFA----KEGYKEF 198
Query: 235 -KEKYQD 240
KE +D
Sbjct: 199 LKENLKD 205
>gi|255038169|ref|YP_003088790.1| Argininosuccinate synthase [Dyadobacter fermentans DSM 18053]
gi|254950925|gb|ACT95625.1| Argininosuccinate synthase [Dyadobacter fermentans DSM 18053]
Length = 400
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 43/133 (32%), Gaps = 20/133 (15%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
P +L FSGG D S A DR V ++ D G + EL+ +
Sbjct: 2 SQPKVVLAFSGGLDTSFCVKYLAEDRGYEVYSVLVDTGGFSDEELKTIEANAYALGVKQH 61
Query: 66 KWKDSLGE---DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
E D I L + +++ +V+ + IF A
Sbjct: 62 ATISKTKEYYNDCIKYLIFGNILKNNTYPLSVSAER---------------IFQAVAVAE 106
Query: 122 LAYRLGITNIVIG 134
A +G + I G
Sbjct: 107 YAKEIGASAIAHG 119
>gi|254302170|ref|ZP_04969528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148322362|gb|EDK87612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 343
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 73/249 (29%), Gaps = 62/249 (24%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ + ++ E + KK+ +
Sbjct: 2 KKVVIGISGGVDSSVSAYLLKEQGYEVIGVTLN---QHLEENSKDIEDAKKVCNKLGISH 58
Query: 69 DSLGEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + ++ +S+ I D+ + +A +
Sbjct: 59 EVINIRKDFENTVIKYFLDGYSTGITPSPCVICDDEIK-----------FKILFDIADKY 107
Query: 127 GITNIVIG-VCETDYSGYPDCRHDT------------IRAIETAINLGMESHV-TVHTPL 172
+ G +YS + I+ + + + + PL
Sbjct: 108 KAEYVATGHYTSVEYS-------EFFSKYLLKSVHSIIKDQSYMLYRLSPTKLERLIFPL 160
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
K + ++A IG + Y K + C A ++G+
Sbjct: 161 KPYSKQKIREIALKIGLEV------------YNKKDSQ--------GVCFA----KEGYK 196
Query: 233 EF-KEKYQD 240
EF KE +D
Sbjct: 197 EFLKENLKD 205
>gi|78485834|ref|YP_391759.1| thiamine biosynthesis protein ThiI [Thiomicrospira crunogena XCL-2]
gi|78364120|gb|ABB42085.1| Thiamine biosynthesis protein thiI [Thiomicrospira crunogena XCL-2]
Length = 478
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 25/181 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS+ + R + + F+ G E+ + + +
Sbjct: 180 LSLMSGGFDSTVASYLTIKRGLKTHFIFFNLGG-AAHEIGVKQVAFYLWEQFSASHRVEF 238
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ ++ +I S+ + + ++ + L A +A + GI +
Sbjct: 239 IT--VPFEEVVAEIFRSTHESYMGVTLKR-------------LMLQAAEEIADQKGIDAL 283
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G S + + + ++ V PL + K + +A IG ++
Sbjct: 284 VTGESVAQVSS---------QTLRNLALIDQVTNKLVLRPLSVMSKPDIMAIADQIGTRE 334
Query: 192 L 192
Sbjct: 335 F 335
>gi|317176819|dbj|BAJ54608.1| argininosuccinate synthase [Helicobacter pylori F16]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|317010295|gb|ADU84042.1| tRNA methyltransferase [Helicobacter pylori SouthAfrica7]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|317008691|gb|ADU79271.1| hypothetical protein HPIN_00055 [Helicobacter pylori India7]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KPIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|308182199|ref|YP_003926326.1| hypothetical protein HPPC_00065 [Helicobacter pylori PeCan4]
gi|308064384|gb|ADO06276.1| hypothetical protein HPPC_00065 [Helicobacter pylori PeCan4]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|308183811|ref|YP_003927944.1| hypothetical protein HPSJM_00075 [Helicobacter pylori SJM180]
gi|308059731|gb|ADO01627.1| hypothetical protein HPSJM_00075 [Helicobacter pylori SJM180]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|298737103|ref|YP_003729633.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori B8]
gi|298356297|emb|CBI67169.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori B8]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|254778749|ref|YP_003056854.1| hypothetical protein HELPY_0011 [Helicobacter pylori B38]
gi|254000660|emb|CAX28569.1| Conserved hypothetical protein; putative signal peptide
[Helicobacter pylori B38]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|217031756|ref|ZP_03437260.1| hypothetical protein HPB128_155g69 [Helicobacter pylori B128]
gi|216946603|gb|EEC25203.1| hypothetical protein HPB128_155g69 [Helicobacter pylori B128]
Length = 191
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|210134212|ref|YP_002300651.1| argininosuccinate synthase [Helicobacter pylori P12]
gi|210132180|gb|ACJ07171.1| argininosuccinate synthase [Helicobacter pylori P12]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|208433988|ref|YP_002265654.1| arginino succinate synthase [Helicobacter pylori G27]
gi|208431917|gb|ACI26788.1| arginino succinate synthase [Helicobacter pylori G27]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|207108720|ref|ZP_03242882.1| hypothetical protein HpylH_04534 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 178
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|207092202|ref|ZP_03239989.1| hypothetical protein HpylHP_04230 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|109948168|ref|YP_665396.1| tRNA methyltransferase [Helicobacter acinonychis str. Sheeba]
gi|109715389|emb|CAK00397.1| tRNA methyltransferase [Helicobacter acinonychis str. Sheeba]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|108562438|ref|YP_626754.1| hypothetical protein HPAG1_0013 [Helicobacter pylori HPAG1]
gi|107836211|gb|ABF84080.1| argininosuccinate synthase [Helicobacter pylori HPAG1]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|15606230|ref|NP_213608.1| hypothetical protein aq_898 [Aquifex aeolicus VF5]
gi|2983434|gb|AAC07016.1| putative protein [Aquifex aeolicus VF5]
Length = 251
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 45/127 (35%), Gaps = 3/127 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
AL L SGG DSS + ++ V+ F Y E + RL K+
Sbjct: 3 KRKALALLSGGLDSSLAVKLVQEQGIEVKAFHF-YTGFCITEFKRRLGQTKEDGSPYVNP 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+P+ I+ DIS + K N V R I+ L A + + G
Sbjct: 62 AIKAAAQLGVPIEIV-DISEEYYDVVINPKYGYGKNVNPCVDCR-IMMLKKAKEIMEKEG 119
Query: 128 ITNIVIG 134
IV G
Sbjct: 120 YDFIVTG 126
>gi|15644646|ref|NP_206815.1| hypothetical protein HP0013 [Helicobacter pylori 26695]
gi|2313087|gb|AAD07083.1| predicted coding region HP0013 [Helicobacter pylori 26695]
Length = 350
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|332667873|ref|YP_004450661.1| tRNA-specific 2-thiouridylase mnmA [Haliscomenobacter hydrossis
DSM 1100]
gi|332336687|gb|AEE53788.1| tRNA-specific 2-thiouridylase mnmA [Haliscomenobacter hydrossis
DSM 1100]
Length = 370
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 3/78 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DS+ + V ++ DY + E C I
Sbjct: 1 MSKLGKVLVAMSGGIDSTVTAMLLHEEGYEVIGITMKTWDYANSGGSKKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPL 79
+ I+ +
Sbjct: 61 DAREVAVSMGFHHFIIDI 78
>gi|284035746|ref|YP_003385676.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Spirosoma linguale DSM 74]
gi|283815039|gb|ADB36877.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Spirosoma linguale DSM 74]
Length = 391
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 6/104 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS + V ++ DY + E C I
Sbjct: 1 MSKHGRILVAMSGGIDSSLAAVMLHEEGYEVIGMTMKTWDYASSGGTKKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+ +IL + + ++ + + + PN
Sbjct: 61 DARNIAVSLGFPHYILDI---REEFGDAVIDHFTGEYLEGRTPN 101
>gi|296329079|ref|ZP_06871584.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
gi|296153798|gb|EFG94611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 343
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 16/128 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ + ++ E + KK+ + +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLN---QHLEENLKDIEDAKKVCDKLGIIH 58
Query: 69 DSLGEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + ++ +SS I D+ + +A +
Sbjct: 59 EVVNIRKDFENIVIKYFLDGYSSGKTPSPCVICDDEIK-----------FKILFDIADKY 107
Query: 127 GITNIVIG 134
+ G
Sbjct: 108 KAEYVATG 115
>gi|294777977|ref|ZP_06743412.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|294448186|gb|EFG16751.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
Length = 445
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 46/248 (18%), Positives = 79/248 (31%), Gaps = 61/248 (24%)
Query: 10 SALLLFSGGQDSSTCLSWALD------RFDRVETLSFD-Y--GQRNKVELECRLCVRKKI 60
+A+ LFSGG DS L A+D +D Y G ++ E + L RKK
Sbjct: 143 TAVSLFSGGLDS---LIGAIDYMTNNPSGKIFLASHYDSYMTGPKSDQE-KIDLRFRKKF 198
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L E I R+++F+ A
Sbjct: 199 AGRYLHLPAVLIEPSISEETSCRS--------------------------RSLMFIAIAQ 232
Query: 121 TLAYRLGITNIVI--GVCETDYSGYPD----CR-----HDTIRAIETAINLGMESHVTVH 169
+A + G ++ P C ++ ++ I+ ++
Sbjct: 233 IIASYAQCDVTIPENGSVSLNFPLSPSRRASCSTRTTHPLFLKQLQKLIHSLGLQPCLIN 292
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY-----GCNSCPAC 224
P + + K E + D +D + I+ ES++C GKR+ C C C
Sbjct: 293 -PYVKMTKGEMVQSCSD---KDYLLQIVTESNSC--GKRNMHQHMYDNRQATHCGHCMPC 346
Query: 225 YLRQKGWM 232
R+ +
Sbjct: 347 MYRKASLI 354
>gi|88601389|ref|YP_501567.1| thiamine biosynthesis protein [Methanospirillum hungatei JF-1]
gi|88186851|gb|ABD39848.1| thiamine biosynthesis protein [Methanospirillum hungatei JF-1]
Length = 387
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 54/180 (30%), Gaps = 25/180 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L S G DS + R R+ L + G + E + R + + L
Sbjct: 172 KAVALISAGIDSPVAAWLMMRRGVRMIFLHIEPG-KFGGE-DIRRNLENNLAALSHWVPG 229
Query: 70 SLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+P + S K + + L A+ A + G
Sbjct: 230 LELPVITIPAEPFYQALMTLSEPKLRCVLCKRG-------------MLELASRYAQKSGC 276
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + + + + + ++ PL+ K E LA+ IG
Sbjct: 277 DGIITGDNLGQVAT---------QTLHNLAPISAGIEIPIYRPLIGYDKEEIITLARKIG 327
>gi|92116313|ref|YP_576042.1| tRNA-specific 2-thiouridylase MnmA [Nitrobacter hamburgensis X14]
gi|122418585|sp|Q1QQB5|MNMA_NITHX RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|91799207|gb|ABE61582.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrobacter hamburgensis X14]
Length = 400
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 16/132 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + C + I + +
Sbjct: 15 RVVVAMSGGVDSSVTAALLKSEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAE 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L + ++ +N A P N V R+++
Sbjct: 75 RLGIPHYVLD---YENRFRETVIENFADSYASGETPVPCIECNRLVKFRDLL------AT 125
Query: 123 AYRLGITNIVIG 134
A LG + G
Sbjct: 126 ARELGAAALATG 137
>gi|313673847|ref|YP_004051958.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Calditerrivibrio nitroreducens DSM 19672]
gi|312940603|gb|ADR19795.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Calditerrivibrio nitroreducens DSM 19672]
Length = 343
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 61/185 (32%), Gaps = 18/185 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ + + L+ V KK+ K
Sbjct: 2 KRVVVAMSGGVDSSVTAYILKKMGYDVVGVTIKMFENQEKYLKDAEAVAKKL-----DIK 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + I + +S K + P + RN F F + G
Sbjct: 57 WEMIDKTIEFQETVISYFINSYRKGLTPN------PCAYC-NRNAKFF-FLYNEMLKYGA 108
Query: 129 TNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKL 183
+I G + E D Y +T + + L + + + PL + K E K+
Sbjct: 109 DHIATGHYADIVEVDGHKYIKKSTNTKKDQSYYLALIRDDLLDKLLFPLGMMDKSEVRKI 168
Query: 184 AQDIG 188
A IG
Sbjct: 169 ASSIG 173
>gi|284164950|ref|YP_003403229.1| thiamine biosynthesis protein [Haloterrigena turkmenica DSM 5511]
gi|284014605|gb|ADB60556.1| thiamine biosynthesis protein [Haloterrigena turkmenica DSM 5511]
Length = 392
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 40/193 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+ L SGG DS + R + D G ++ E R +++
Sbjct: 180 PLGSQEPAVALVSGGIDSPVAAYEIMKRGSPIVPAYVDLGDYGGIDHEARAMETVRLLSE 239
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF----- 118
+ + T ++ ++ D GR L
Sbjct: 240 YAPNF---------DMDVYRIPGG--ETVDLLVREMDK--------GR---MLSLRRFFY 277
Query: 119 --AATLAYRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
A TLA R+ IV G S + ++ + + +H PL+
Sbjct: 278 RAAETLAERVDAHGIVTGEAVGQKSS----------QTLQNLGVTSRAADLPIHRPLLTR 327
Query: 176 KKYETWKLAQDIG 188
K + A++IG
Sbjct: 328 DKQDIVAQAREIG 340
>gi|260752750|ref|YP_003225643.1| tRNA-specific 2-thiouridylase MnmA [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|258552113|gb|ACV75059.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 370
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 64/208 (30%), Gaps = 31/208 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
K A ++ SGG DSS + A ++ Y V + C K I +
Sbjct: 11 KSAQRIVVAMSGGVDSSVVAALAKATGAETIGITLQLYDHGAAVGRKGSCCAGKDIRDAR 70
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GR-N-IIFLVFAAT 121
+ ++ S+ + + P VP R N +
Sbjct: 71 AVAEKIGIPHYVFDYENN---FKESVIDDFVSEYVAGRTP---VPCIRCNQGVKFTDLLN 124
Query: 122 LAYRLGITNIVIG------VCETDYSGYPDCRHDTIRAIETA------INLGMESHVT-V 168
+A LG + G V R + RA++ A + + + +
Sbjct: 125 VARELGADCLATGHYVRRLVNND--------RVEMHRALDPARDQSYFLFATTKEQLDYL 176
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLI 196
PL L K + ++A ++G +
Sbjct: 177 RFPLGGLPKPKVREMAAELGLSVAMKAD 204
>gi|225631290|ref|ZP_03787968.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Wolbachia endosymbiont of Muscidifurax uniraptor]
gi|225591011|gb|EEH12215.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Wolbachia endosymbiont of Muscidifurax uniraptor]
Length = 370
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 47/139 (33%), Gaps = 15/139 (10%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
D A++ SGG DSS + + +V ++ YG C + +
Sbjct: 13 DKTPHQTKAVVAMSGGVDSSVAAALLHNLGYQVIGVTLQLYGTDGNANARKGACCAGQDI 72
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIF 115
+ +S+G H + +I + ++ A P N V R+++
Sbjct: 73 YDAKRVAESVGFPHYI--LNYEEIFKKEVIEDFASTYMRGETPIPCVRCNQTVKFRDLLQ 130
Query: 116 LVFAATLAYRLGITNIVIG 134
+ LG +V G
Sbjct: 131 VT------KNLGADVLVTG 143
>gi|241761211|ref|ZP_04759299.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|283856328|ref|YP_162504.2| tRNA-specific 2-thiouridylase MnmA [Zymomonas mobilis subsp.
mobilis ZM4]
gi|292495018|sp|Q5NPG7|MNMA_ZYMMO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|241374118|gb|EER63615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|283775325|gb|AAV89393.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Zymomonas mobilis subsp. mobilis ZM4]
Length = 370
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 64/208 (30%), Gaps = 31/208 (14%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
K A ++ SGG DSS + A ++ Y V + C K I +
Sbjct: 11 KSAQRIVVAMSGGVDSSVVAALAKATGAETIGITLQLYDHGAAVGRKGSCCAGKDIRDAR 70
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GR-N-IIFLVFAAT 121
+ ++ S+ + + P VP R N +
Sbjct: 71 AVAEKIGIPHYVFDYENN---FKESVIDDFVSEYVAGRTP---VPCIRCNQGVKFTDLLN 124
Query: 122 LAYRLGITNIVIG------VCETDYSGYPDCRHDTIRAIETA------INLGMESHVT-V 168
+A LG + G V R + RA++ A + + + +
Sbjct: 125 VARELGADCLATGHYVRRLVNND--------RVEMHRALDPARDQSYFLFATTKEQLDYL 176
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLI 196
PL L K + ++A ++G +
Sbjct: 177 RFPLGGLPKPKVREMAAELGLSVAMKAD 204
>gi|261346379|ref|ZP_05974023.1| thiamine biosynthesis/tRNA modification protein ThiI [Providencia
rustigianii DSM 4541]
gi|282565697|gb|EFB71232.1| thiamine biosynthesis/tRNA modification protein ThiI [Providencia
rustigianii DSM 4541]
Length = 483
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K+I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQIAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +A+ + + + KI D + V R + + A+ +A
Sbjct: 227 L--WNRFGSSHKVRFIAVNFE----PVVAEILEKIDDGQMG--VVLKR--MMVRAASRVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + S + PL+ K KL
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 328 ARQIGTEDF 336
>gi|195952783|ref|YP_002121073.1| thiamine biosynthesis protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932395|gb|ACG57095.1| thiamine biosynthesis protein [Hydrogenobaculum sp. Y04AAS1]
Length = 345
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ P AL+LFSGG DS + + V+ + F Y E + RL + K ++
Sbjct: 1 MSHKPKALVLFSGGLDSQLAAVNISKIQGIEVKLIHF-YTGFCITEHKRRLGIPNKDGKI 59
Query: 64 MPKWKDSLGEDHILPLAIL 82
D LP+ I+
Sbjct: 60 PQNPALKAAADLELPIEII 78
>gi|300856004|ref|YP_003780988.1| putative thiamine biosynthesis protein [Clostridium ljungdahlii DSM
13528]
gi|300436119|gb|ADK15886.1| predicted thiamine biosynthesis protein [Clostridium ljungdahlii
DSM 13528]
Length = 380
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 59/188 (31%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS R R+ + F + E K++ ++ + S+
Sbjct: 176 LMLSGGIDSPVAGYMMARRGVRLNCVYF---HSHPYTSERAKEKVKELARILKGYTGSIN 232
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
I I + + + ++ + A LA + + ++
Sbjct: 233 LYVAPFTEIQMQIIKNCREDELTIIMRR-------------FMMRVACKLAEKYNVDSVT 279
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +E I + V PL+ + K + A+ IG +
Sbjct: 280 TGESVGQVAS---------QTMEGLIVSNDVADRPVFRPLIAMDKVDIMDEARKIGTYET 330
Query: 193 VNLILEES 200
L E+
Sbjct: 331 SILPYEDC 338
>gi|229815189|ref|ZP_04445525.1| hypothetical protein COLINT_02235 [Collinsella intestinalis DSM
13280]
gi|229809199|gb|EEP44965.1| hypothetical protein COLINT_02235 [Collinsella intestinalis DSM
13280]
Length = 406
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 27/187 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A + L S G DS R V + F R + R I +L P
Sbjct: 169 SAGKVVTLLSSGIDSPVATWQLARRGAVVVPIHFS--GRPQTADTSEYLCRDIIEQLAP- 225
Query: 67 WKDSLGEDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+G +++P +IS + + + + + A +A
Sbjct: 226 -AVQIGRMYVVPFGDCQREISMKTPSDLRVIMYRR-------------VMYSVAERIARL 271
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G IV G + + +E + + + V PL+ K E + A+
Sbjct: 272 EGAKAIVTGESLGQVAS---------QTLENIMAVNEVVDIPVFRPLIGSDKQEIIERAK 322
Query: 186 DIGGQDL 192
IG ++
Sbjct: 323 RIGTYEI 329
>gi|182417115|ref|ZP_02948491.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
butyricum 5521]
gi|237669147|ref|ZP_04529131.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182379048|gb|EDT76553.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
butyricum 5521]
gi|237657495|gb|EEP55051.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 385
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 62/194 (31%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +L+ SGG DS R + + Y + E K++ ++ +
Sbjct: 174 MNGSTMLMLSGGIDSPVAGYLMAKRGVELNCV---YYHSHPYTSERAKDKVKELARILSQ 230
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I +I + + ++ + A LA +
Sbjct: 231 YTEKINLYIVPFTDIQMEIIDKCREDELTIIMRR-------------FMMRVACKLAEKY 277
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
I ++ G + + ++ I + PL+ K + ++A+
Sbjct: 278 NIDSVCTGESIGQVAS---------QTMDGLIVSDDCADRPAFRPLIATDKTDIMEIARK 328
Query: 187 IGGQDLVNLILEES 200
IG + L E+
Sbjct: 329 IGTYETSILPYEDC 342
>gi|242277963|ref|YP_002990092.1| ExsB family protein [Desulfovibrio salexigens DSM 2638]
gi|242120857|gb|ACS78553.1| ExsB family protein [Desulfovibrio salexigens DSM 2638]
Length = 269
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 47/176 (26%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFD--Y-GQRNKVELECRLCVRKKIVELMPK 66
A++ FSGG DS+ L A + D+ S Y Q + E K+ E M
Sbjct: 21 AVIAFSGGVDSTLLLHTAKEALGDKAIAASISTPYVPQWEQGE-------AKEFAEQME- 72
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + ++ + K NI+F +A
Sbjct: 73 -----VKHVVVDMGFPEELRMNPPEHCYTCK--------------NILF-SKLLEIAQEN 112
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
I +++ G D S Y R I+A+ + + +P + L K E
Sbjct: 113 DIEHVLEGTNIDDLSDY---RPG-IKAL---------RELEIRSPFVEAELTKQEI 155
>gi|163784843|ref|ZP_02179624.1| hypothetical protein HG1285_07966 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879890|gb|EDP73613.1| hypothetical protein HG1285_07966 [Hydrogenivirga sp. 128-5-R1-1]
Length = 341
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 13/133 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+ L+SGG DS+ + ++ V L F Y E + R +K+
Sbjct: 1 MKRKAVALYSGGLDSTLAIKLIQEQGIEVIALHF-YTGFCITETKRRRGEKKEDGSHYMN 59
Query: 67 WKDSLGEDH-----ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ I+ ++ + + +N N P + R A
Sbjct: 60 PALKYAAKYGFSLEIIDISE----GYFDIIQNPKYGYGSNINPC--IDCR-AYMYKHAKK 112
Query: 122 LAYRLGITNIVIG 134
+G I+ G
Sbjct: 113 YMEEIGADFIISG 125
>gi|299131958|ref|ZP_07025153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Afipia sp. 1NLS2]
gi|298592095|gb|EFI52295.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Afipia sp. 1NLS2]
Length = 393
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 57/197 (28%), Gaps = 36/197 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSST + V ++ Y + C + I + +
Sbjct: 15 RVVVAMSGGVDSSTTAALLKAEGYDVIGITLQLYDHGAATHRKGACCAGQDIHDARDVAE 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ A P VP R++ F T A
Sbjct: 75 RIGIPHYVLD---YESRFRESVIDRFAESYVLGETP---VPCIECNRSVKFRDLLTT-AR 127
Query: 125 RLGITNIVIG---------------VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
LG + G VC D R + T + +
Sbjct: 128 ELGAKALATGHYVASRRQADGSRAMVCAADAD-----RDQSYFLFATTQDQLNDLRF--- 179
Query: 170 TPLMWLKKYETWKLAQD 186
PL + K +T +LA+
Sbjct: 180 -PLGDMTKTQTRELARR 195
>gi|85058637|ref|YP_454339.1| thiamine biosynthesis protein ThiI [Sodalis glossinidius str.
'morsitans']
gi|123519928|sp|Q2NV91|THII_SODGM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|84779157|dbj|BAE73934.1| thiamine biosynthesis protein ThiI [Sodalis glossinidius str.
'morsitans']
Length = 483
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 58/189 (30%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVNYCFFNLGG-AAHEIGVRQVAHHLWRRF 231
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
K L A + + K++D + V R + + A+ +A
Sbjct: 232 GQSHKVRFVS---LDFAPV--------VNEILAKVEDGQMGI--VLKR--MMVRAASAIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI +V G S + + + S + PL+ K L
Sbjct: 277 ERYGIQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIITL 327
Query: 184 AQDIGGQDL 192
A IG ++
Sbjct: 328 AHQIGTEEY 336
>gi|315658023|ref|ZP_07910896.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus lugdunensis M23590]
gi|315496913|gb|EFU85235.1| thiamine biosynthesis/tRNA modification protein ThiI
[Staphylococcus lugdunensis M23590]
Length = 407
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 69/196 (35%), Gaps = 35/196 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + ++K++EL
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMRRGVTIEAIHF-----HSPPFTSEK-AKEKVIELTRIMSQ 232
Query: 70 SLG--EDHILPLAIL-GDISHSSLTK--NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+G + HI+P L I+ + +M+ + + V +
Sbjct: 233 RVGPIKLHIVPFTNLQKQINKVVHPRYTMTSMRRMMMRIADKVV---------------H 277
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+G IV G + + +++ + + V PL+ L K E K+A
Sbjct: 278 EIGAHAIVNGENLGQVAS---------QTLKSMYAINHVTSTPVLRPLLTLDKEEIVKMA 328
Query: 185 QDIGGQDLVNLILEES 200
+ IG D+ E+
Sbjct: 329 RKIGTYDVSIQPFEDC 344
>gi|157825546|ref|YP_001493266.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia akari str. Hartford]
gi|166235076|sp|A8GMY3|MNMA_RICAH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|157799504|gb|ABV74758.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia akari str. Hartford]
Length = 365
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 1 MINLGDKHSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 61 IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNNSVKFRDL 117
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + + G SG D + ++ A + + +
Sbjct: 118 I------KTARELGASQLATGHYVRKVSG--DNGVELHTGLDPAKDQSYFLFTTTKEQLE 169
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL W K ET KLA G
Sbjct: 170 YLSFPLGWFTKDETRKLASKFG 191
>gi|254468020|ref|ZP_05081426.1| argininosuccinate synthase [beta proteobacterium KB13]
gi|207086830|gb|EDZ64113.1| argininosuccinate synthase [beta proteobacterium KB13]
Length = 404
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 22/136 (16%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K +L +SGG D+S L W +++D V T + D GQ ++E + I E+
Sbjct: 1 MKSIKKVVLAYSGGLDTSVILKWLQEKYDCEVVTFTADIGQGEEIEPAREKAKQAGIKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---FLVFA 119
+ ++ +++I P+ I ++ R +I + A
Sbjct: 61 YIENLEEDFAKNYIFPMFRANAIYEGEYLLGTSI-------------ARPLIAKRLIEIA 107
Query: 120 ATLAYRLGITNIVIGV 135
A G I G
Sbjct: 108 A----ETGADAIAHGA 119
>gi|254173377|ref|ZP_04880050.1| N-type ATP pyrophosphatase superfamily protein [Thermococcus sp.
AM4]
gi|214032786|gb|EEB73615.1| N-type ATP pyrophosphatase superfamily protein [Thermococcus sp.
AM4]
Length = 271
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
++++ A++ +SGG+DS L A + + +E + D+G + +E + + +
Sbjct: 47 ELMRDVNKAVVAYSGGKDSVVALYLAKEVYKVPELEAVMVDHGLMAEEAIENAKRIAEHL 106
Query: 61 VELMPKWK 68
+
Sbjct: 107 GVPFKVLR 114
>gi|150401225|ref|YP_001324991.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
aeolicus Nankai-3]
gi|150013928|gb|ABR56379.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
aeolicus Nankai-3]
Length = 406
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 56/183 (30%), Gaps = 25/183 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L S G DSS + + R L + E L KK+ ++ + D
Sbjct: 201 KVLVLLSDGIDSSVASYYIIKRGCNAVFL-------HMKLSEEGLEKTKKLCGVLNDY-D 252
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
E ++ S+L K K T L A A
Sbjct: 253 CNSELIVVDYKEELKNIVSNLKKINREKYACVFCKKT--------MLKIAEKYAKENNCH 304
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G + + ++ + + + PL+ K E A++IG
Sbjct: 305 AIVNGDNLGQVAS---------QTLKNLAVISEGVELPILRPLIGFDKQEIINKAKEIGT 355
Query: 190 QDL 192
++
Sbjct: 356 YEI 358
>gi|260773297|ref|ZP_05882213.1| thiamine biosynthesis protein ThiI [Vibrio metschnikovii CIP 69.14]
gi|260612436|gb|EEX37639.1| thiamine biosynthesis protein ThiI [Vibrio metschnikovii CIP 69.14]
Length = 482
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGYDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + KI D + V R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKIDDGQMG--VVLKR--MFMRVAGRIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFGIQALVTGEAIGQVSS---------QTLTNLRHIDGVTDRLILRPLINWDKGDIMDL 327
Query: 184 AQDIGGQDL 192
A+DIG +D
Sbjct: 328 ARDIGTEDF 336
>gi|256425783|ref|YP_003126436.1| tRNA-specific 2-thiouridylase MnmA [Chitinophaga pinensis DSM
2588]
gi|256040691|gb|ACU64235.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Chitinophaga pinensis DSM 2588]
Length = 366
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ + L+ SGG DS+ ++ V ++ DY + E C
Sbjct: 1 MSRHGKVLVAMSGGIDSTVTALMLHEQGYEVVGITMKTWDYASAGSSKKETGCCNLDSFN 60
Query: 62 ELMPKWKDSLGEDHILPLAI 81
+ +L +
Sbjct: 61 DARAAAVHHGFPHFVLDIRD 80
>gi|205822083|sp|Q2ISK2|MNMA_RHOP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 398
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 58/191 (30%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + C + I + +
Sbjct: 15 RVVVAMSGGVDSSATAALLKSQGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARDVAE 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R++ F AT A
Sbjct: 75 RIGIPHYVLD---YESRFRESVIDSFADSYALGETP---VPCIECNRSVKFRDLLAT-AR 127
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLMWLKK 177
LG + + G D I A + E + PL + K
Sbjct: 128 ELGASALATG-HYVSSRRLADGSRALICAADRDRDQSYFLFATTREQLDFLRFPLGDMTK 186
Query: 178 YETWKLAQDIG 188
+T LA+ G
Sbjct: 187 PQTRDLARQFG 197
>gi|86751223|ref|YP_487719.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
HaA2]
gi|86574251|gb|ABD08808.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopseudomonas palustris HaA2]
Length = 402
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 58/191 (30%), Gaps = 20/191 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + C + I + +
Sbjct: 19 RVVVAMSGGVDSSATAALLKSQGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARDVAE 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
++L S+ + A P VP R++ F AT A
Sbjct: 79 RIGIPHYVLD---YESRFRESVIDSFADSYALGETP---VPCIECNRSVKFRDLLAT-AR 131
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTVHTPLMWLKK 177
LG + + G D I A + E + PL + K
Sbjct: 132 ELGASALATG-HYVSSRRLADGSRALICAADRDRDQSYFLFATTREQLDFLRFPLGDMTK 190
Query: 178 YETWKLAQDIG 188
+T LA+ G
Sbjct: 191 PQTRDLARQFG 201
>gi|52549241|gb|AAU83090.1| thiamine biosynthesis ATP pyrophosphatase [uncultured archaeon
GZfos26E7]
Length = 381
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 32/181 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL----ECRLCVRKKIVELMPKW 67
+ L SGG DS + R V L FD +E + R + I L
Sbjct: 175 IALVSGGIDSPVAAWMLMRRGAEVIPLYFD------LEEFTDPKSRELAEQSINSLFEWS 228
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + A+L +I+ + + + + ++A +
Sbjct: 229 YSDMTAYRVPYGAVLREIASRCEPRITCVICKR-------------MMYRIGTSIAEKEN 275
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + ++ PL+ + K E A I
Sbjct: 276 ACGIVTGSSLGQVAS---------QTSQNMLAEMHGLGMPIYHPLIGMDKREIIDRATRI 326
Query: 188 G 188
G
Sbjct: 327 G 327
>gi|134046630|ref|YP_001098115.1| argininosuccinate synthase [Methanococcus maripaludis C5]
gi|132664255|gb|ABO35901.1| argininosuccinate synthase [Methanococcus maripaludis C5]
Length = 397
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 34/196 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A+L +SGG D+S CL D++ +V +++ D GQ + +E +K
Sbjct: 2 QEKIAVLAYSGGLDTSCCLKLLEDKYDYKVISVAVDVGQPEEDLIEPEEKAKK------- 54
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + + + + + + + P + R +I + A LA
Sbjct: 55 ---FGVLKHYTIDAKE--EFAKDYIFRAIKANALYEGYPLSTALARPLIAIKIA-ELAEE 108
Query: 126 LGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL--MWLKKYE 179
+G + I G C E+ + + + P+ + L + E
Sbjct: 109 VGASAISHG-----------CTGKGNDQF--RFESVMRAKT-PEIEIVAPIRDLNLTRTE 154
Query: 180 TWKLAQDIGGQDLVNL 195
+ A++ G V+L
Sbjct: 155 EIEYAKEKGIPVPVDL 170
>gi|85375520|ref|YP_459582.1| tRNA-specific 2-thiouridylase MnmA [Erythrobacter litoralis
HTCC2594]
gi|122543295|sp|Q2N6A6|MNMA_ERYLH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|84788603|gb|ABC64785.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erythrobacter litoralis HTCC2594]
Length = 384
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 67/201 (33%), Gaps = 41/201 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DSS + A V ++ +DYG + C C I +
Sbjct: 27 RIVVAMSGGVDSSVVAALAHASGAEVIGITLQLYDYGAATGRKGAC--CAGDDIQDARAV 84
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP-GR-NII-----FLVF 118
++ S+ ++V + D+ L T VP R N+ L
Sbjct: 85 ADRLGIAHYVFDH-------ESAFREDVVEQFADDYLSGRTPVPCIRCNMGPKFTDLLRM 137
Query: 119 AATLAYRLGITNIVIGV----CETDYSGYPDCRHDTIRAIETA------INLGMESHVT- 167
A LG + G ++ + RA++ A + E+ +
Sbjct: 138 ----ARELGADCLATGHYVRRVAGEHG------PELHRALDPARDQSYFLYGTTETQLDF 187
Query: 168 VHTPLMWLKKYETWKLAQDIG 188
+ PL L K +LA+ G
Sbjct: 188 LRFPLGDLPKTAVRELAEAAG 208
>gi|31544324|ref|NP_852902.1| multifunctional FAD synthetase/riboflavin kinase/tRNA-specific
2-thiouridylase [Mycoplasma gallisepticum str. R(low)]
gi|81572856|sp|Q7NBZ0|MNMA_MYCGA RecName: Full=Trifunctional protein ribF/mnmA; Includes: RecName:
Full=FMN adenylyltransferase; AltName: Full=FAD
pyrophosphorylase; AltName: Full=FAD synthase; Includes:
RecName: Full=Riboflavin kinase; AltName:
Full=Flavokinase; Includes: RecName: Full=tRNA-specific
2-thiouridylase mnmA
gi|31541168|gb|AAP56470.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
str. R(low)]
gi|284930363|gb|ADC30302.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
str. R(high)]
Length = 657
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
++ P ++ SGG DS+ C + V
Sbjct: 284 QEKPKVVVALSGGVDSAVCAYLLQQQGYDVVA 315
>gi|167042070|gb|ABZ06805.1| putative tRNA methyl transferase [uncultured marine microorganism
HF4000_141I21]
Length = 382
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 38/134 (28%), Gaps = 14/134 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K ++ SGG DSST V ++ K E R C + + +
Sbjct: 18 KDTKVVVAMSGGVDSSTVAGLMKKDGYDVIGITLKLYDDAKSSKESRQCCAGQDILDAKR 77
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAA 120
L DH + + + P N V R++
Sbjct: 78 VSQQLNIDHKI--LYYQKKFKKDVIDSFIDSYVAGETPIPCVQCNQTVKFRDL------Y 129
Query: 121 TLAYRLGITNIVIG 134
+ A + ++ G
Sbjct: 130 SYALEMKADALITG 143
>gi|20807693|ref|NP_622864.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Thermoanaerobacter tengcongensis MB4]
gi|24638309|sp|Q8RAH7|MNMA1_THETN RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|20516242|gb|AAM24468.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Thermoanaerobacter tengcongensis MB4]
Length = 364
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 66/209 (31%), Gaps = 39/209 (18%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-----YGQRNKVELECRLCVRKK 59
++ ++ SGG DSS ++ V ++ YG K + + C K
Sbjct: 1 MEVNNRVVVGMSGGVDSSVTAYLLKEQGFEVIGVTMRVWVDPYG---KARDDDKSCCSLK 57
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIF 115
+ K + LG H L ++ + + K + PN P R F
Sbjct: 58 AIHDAKKVAEILGIPHY--TVNLSEVFYDKIVKYFIDEYLKGRTPN---PCVFCNR---F 109
Query: 116 LVFA--ATLAYRLGITNIVIGV-----CETDYSGY-----PDCRHDTIRAIETAINLGME 163
+ F A+ LG I G + D Y D + + +
Sbjct: 110 IKFGDLLEKAHELGAYYIATGHYVRKEYDEDRKRYLLKKGLD----FKKDQSYMLYRLTQ 165
Query: 164 SHVTVHT--PLMWLKKYETWKLAQDIGGQ 190
+ H PL K E LA+ IG
Sbjct: 166 EQLK-HALFPLGNYTKEEVRALAEKIGLP 193
>gi|256028712|ref|ZP_05442546.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. D11]
gi|289766621|ref|ZP_06525999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D11]
gi|289718176|gb|EFD82188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D11]
Length = 344
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 74/250 (29%), Gaps = 63/250 (25%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELMP 65
++ SGG DSS ++ V ++ + Q N ++E V K+ +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLN--QHLEENSKDIEDAKKVCNKLEIIHE 59
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++I+ L + S I D+ + +A +
Sbjct: 60 VVNIRKDFENIVIKYFLD--GYKSGKTPSPCVICDDEIK-----------FKILFDIADK 106
Query: 126 LGITNIVIG-VCETDYSGYPDCRHDT------------IRAIETAINLGMESHV-TVHTP 171
+ G +YS I+ + + + + P
Sbjct: 107 YKAEYVATGHYTSVEYS------EIFSKYLLLKSVHSIIKDQSYMLYRLSPNKLERLIFP 160
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
L + K E ++A +G + Y K + C A ++G+
Sbjct: 161 LKYYTKQEIREIALKLGLEI------------YNKKDSQ--------GICFA----KEGY 196
Query: 232 MEF-KEKYQD 240
EF KE +D
Sbjct: 197 KEFLKENLKD 206
>gi|317178074|dbj|BAJ55863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori F16]
Length = 342
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCTLCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|312129941|ref|YP_003997281.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leadbetterella byssophila DSM 17132]
gi|311906487|gb|ADQ16928.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leadbetterella byssophila DSM 17132]
Length = 368
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 64/198 (32%), Gaps = 11/198 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V ++ DY + E C I
Sbjct: 1 MTKRGRVLVAMSGGIDSSLAAVLLHEQGYEVVGMTMKTWDYASSGGTKKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + +IL + S+ + + + PN V I
Sbjct: 61 DARAIAVNLGFPHYILDI---RSEFGDSVIDHFTGEYLEGRTPNPCVLCNTHIKWDALLR 117
Query: 122 LAYRLGITNIVIGVCE---TDYSGYPDCR-HDTIRAIETAIN-LGMESHVTVHTPLMWLK 176
A L I G + Y R DT + + + ES PL L
Sbjct: 118 RADNLNCEFIATGHYAKIRQENGRYVISRGKDTTKDQSYVLWGVSQESLSRTLLPLGDLT 177
Query: 177 KYETWKLAQDIGGQDLVN 194
K E ++A+ G DLVN
Sbjct: 178 KAEIREMARQKGFYDLVN 195
>gi|308062619|gb|ADO04507.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori Cuz20]
Length = 342
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDRVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|262195764|ref|YP_003266973.1| thiamine biosynthesis/tRNA modification protein ThiI [Haliangium
ochraceum DSM 14365]
gi|262079111|gb|ACY15080.1| thiamine biosynthesis/tRNA modification protein ThiI [Haliangium
ochraceum DSM 14365]
Length = 401
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 70/191 (36%), Gaps = 31/191 (16%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL---SFDY-GQRNKVELECRLCVRKKIVELMPKWK 68
LL SGG DS A+ R RV + SF Y G + K ++ + + + W+
Sbjct: 191 LLLSGGIDSPVAGWSAMRRGCRVVAVYFHSFPYTGDKTKKKV-------LTLAQRLAAWQ 243
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S+ + H + + + + R + L A+ LA R +
Sbjct: 244 GSVPVHVV----------HFTEVQKALREHAGGRADLGVLMYRRM-MLRAASRLALRDEL 292
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ +V G D G + +E + + V V PL+ K E + AQ IG
Sbjct: 293 SALVTG----DSIG-----QVASQTVENLGVVEDAASVPVLRPLLTFDKAEIVERAQQIG 343
Query: 189 GQDLVNLILEE 199
++ E+
Sbjct: 344 TYEVSIQPYED 354
>gi|261349629|ref|ZP_05975046.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanobrevibacter smithii DSM 2374]
gi|288861587|gb|EFC93885.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanobrevibacter smithii DSM 2374]
Length = 381
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 59/190 (31%), Gaps = 29/190 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPK 66
++L S G DS + + R V L D + K I +L
Sbjct: 177 KVVVLVSSGIDSPVAVYLMMKRGCEVIALHCD-----NAPFTGPKVHENFDKIIDQLQSY 231
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K ++ + + + + + A LA++
Sbjct: 232 AKGVPITKKVVKYGEYLQQAKDCAPEKMTCVLCKSG------------MYKIAEKLAHKY 279
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G + IV G + + + + + + +PL+ L K E ++A+D
Sbjct: 280 GASAIVDGSSVGQVAS---------QTLSNILATRHGVDMPILSPLIGLDKLEITRIAED 330
Query: 187 IGGQDLVNLI 196
IG ++ L
Sbjct: 331 IGTFEISKLD 340
>gi|283781603|ref|YP_003372358.1| argininosuccinate synthase [Pirellula staleyi DSM 6068]
gi|283440056|gb|ADB18498.1| argininosuccinate synthase [Pirellula staleyi DSM 6068]
Length = 404
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRK 58
PS +L +SGG D+S L W D V + D GQ R + + R C K
Sbjct: 2 PSCVLAYSGGLDTSVILGWLQDEGYEVHAVYVDLGQPCEDRQAILKKARDCGAK 55
>gi|332158560|ref|YP_004423839.1| hypothetical protein PNA2_0919 [Pyrococcus sp. NA2]
gi|331034023|gb|AEC51835.1| hypothetical protein PNA2_0919 [Pyrococcus sp. NA2]
Length = 302
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++KK L+ SGG+DS+ +E L + G
Sbjct: 43 LLKKNEKVLVAVSGGKDSAVTAYVLKKLGYNIECLHINLG 82
>gi|325995283|gb|ADZ50688.1| tRNA-5-methylaminomethyl-2-thiouridylate-methyltransferase
[Helicobacter pylori 2018]
Length = 350
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|317013437|gb|ADU80873.1| hypothetical protein HPGAM_00065 [Helicobacter pylori
Gambia94/24]
Length = 350
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|317011869|gb|ADU82477.1| hypothetical protein HPLT_00060 [Helicobacter pylori Lithuania75]
Length = 350
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|307636697|gb|ADN79147.1| tRNA-5-methylaminomethyl-2-thiouridylate-methyltransferase
[Helicobacter pylori 908]
Length = 350
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|302385309|ref|YP_003821131.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
saccharolyticum WM1]
gi|302195937|gb|ADL03508.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
saccharolyticum WM1]
Length = 392
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +++ + F + +K +
Sbjct: 176 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYF-----HAPPYTSERAKQKVIDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ ++ + + I I + + + ++ + A
Sbjct: 231 KLVSRYSGPIHLHVVNFTDIQLYIYDKCPHEELTIIMRRY-------------MMRIAER 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA G ++ G + + +++ + + V P++ K E
Sbjct: 278 LAGECGAMALITGESIGQVAS---------QTMQSLTATDAATTMPVFRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+++ IG + L E+
Sbjct: 329 DVSEKIGTYETSVLPFEDC 347
>gi|255076007|ref|XP_002501678.1| predicted protein [Micromonas sp. RCC299]
gi|226516942|gb|ACO62936.1| predicted protein [Micromonas sp. RCC299]
Length = 780
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/215 (12%), Positives = 56/215 (26%), Gaps = 52/215 (24%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLCVRKK 59
++ P ++ + SGG DS + V + DY R + K
Sbjct: 292 EERPRSVAISLSGGVDSMVLATILKAAAPSFGDFDVVAMHIDYANRPE---------SGK 342
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + W + G ++ + + A A
Sbjct: 343 EADFVRGWCERKGIVCVVRRIAEVKRGVTPREQYEAE--------------------SRA 382
Query: 120 ATL------AYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVT 167
A G + +G E D + + R + + G+ V
Sbjct: 383 IRYGLYKECAKTHGFPAVFVGHHEGDVQENIIANIF---RGANVLGMNGMNEEGVVEGVR 439
Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHT 202
+ P++ K A G ++ + +
Sbjct: 440 IWRPMLPHSKDPVLDFAHTFGVPYFLDT--TPTWS 472
>gi|118594731|ref|ZP_01552078.1| argininosuccinate synthase [Methylophilales bacterium HTCC2181]
gi|118440509|gb|EAV47136.1| argininosuccinate synthase [Methylophilales bacterium HTCC2181]
Length = 405
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+IK +L +SGG D+S L W + V T + D GQ+ ++E + E
Sbjct: 1 MIKDVNKIVLAYSGGLDTSVILKWLQQEYNCEVVTFTADLGQKEEIEPARAKATSAGVKE 60
Query: 63 LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 IFIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIA 96
>gi|15611082|ref|NP_222733.1| hypothetical protein jhp0011 [Helicobacter pylori J99]
gi|4154513|gb|AAD05593.1| putative [Helicobacter pylori J99]
Length = 350
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38
>gi|160880433|ref|YP_001559401.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
phytofermentans ISDg]
gi|189030624|sp|A9KKT0|THII_CLOPH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|160429099|gb|ABX42662.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
phytofermentans ISDg]
Length = 391
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 61/193 (31%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+LL SGG DS R +E F + ++K+V+L
Sbjct: 180 KAMLLLSGGIDSPVAGYMISKRGVTIEATYF-----HAPPYTSE-RAKQKVVDLAKIISA 233
Query: 70 SLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G + H++ + + I + A ++A R
Sbjct: 234 YTGPIKLHVVNFTDIQLYIYEKCPHEELTIIMRRY------------MMKIAESIANRSK 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
++ G + + +++ + V+ PL+ + K E +++ I
Sbjct: 282 CLGLITGESIGQVAS---------QTMQSLAATNAVCTMPVYRPLIGMDKQEIIDISERI 332
Query: 188 GGQDLVNLILEES 200
G + L E+
Sbjct: 333 GTFETSVLPFEDC 345
>gi|325106196|ref|YP_004275850.1| hypothetical protein Pedsa_3496 [Pedobacter saltans DSM 12145]
gi|324975044|gb|ADY54028.1| hypothetical protein Pedsa_3496 [Pedobacter saltans DSM 12145]
Length = 440
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 85/244 (34%), Gaps = 42/244 (17%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K+ + LFSGG DS L A+D LS ++K+ L P
Sbjct: 133 KEKYKQVNLFSGGLDS---LIGAID------FLST--HPKDKILLAS---------HYDP 172
Query: 66 KWKDSLGEDHIL-PLAILGDISHSSLTKNVAMKIQDNNLP-NTFVPGRNIIFLVFAATLA 123
+ K L + +L + + ++ + + T R+I+F+ A ++
Sbjct: 173 QMKGPLSDQTVLLDKLEVKYKGQFNYVPSIKVTLSQTTTKRETTFRSRSILFIGIALLIS 232
Query: 124 YRLGITNIVIGVCETDYSGYP-------DCRHDTIRAI----ETAINLGMESHVTVHTPL 172
I I++ + YP C T + I ++ + ++ P
Sbjct: 233 QGKKINEIIVPENGSVSLNYPLSPSRRTSCSTRTTHSFVLEKTNLIISTLKINSNIYNPY 292
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEW----GYGCNSCPACYLRQ 228
+ K E +D+ + + I+ S++C GKR R W C C C RQ
Sbjct: 293 EFKTKGEMVDDCEDL---EFLRKIIGFSNSC--GKRGHRKTWVNRSATHCGVCMPCIYRQ 347
Query: 229 KGWM 232
Sbjct: 348 ASLQ 351
>gi|315122753|ref|YP_004063242.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496155|gb|ADR52754.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 398
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 6/134 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
D K ++ SGG DSS + V ++ Y + + + C + +
Sbjct: 7 DKNPKDMRVVVAMSGGVDSSIVAALLKRDGYDVVGVTLQLYNGGKESKRKGSCCAGQDVY 66
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAA 120
+ ++ + H+++ A P V R + FL
Sbjct: 67 DARRVCDAIDVPHYVFD---YEERFHNAVIVPFANAYIAGETPLPCVDCNRTVKFLDL-L 122
Query: 121 TLAYRLGITNIVIG 134
++ RLG + G
Sbjct: 123 SVMRRLGADVLATG 136
>gi|291542025|emb|CBL15135.1| thiazole biosynthesis/tRNA modification protein ThiI [Ruminococcus
bromii L2-63]
Length = 393
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 58/197 (29%), Gaps = 37/197 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A +L SGG DS R R+ + F K+V L+ +
Sbjct: 180 RAAILISGGLDSPVAAYMMAKRGIRLTAIHF------ASPPYTSPRAEDKVVRLLRRVSR 233
Query: 70 SLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G+ + +P L + + + I + + + +A +
Sbjct: 234 YAGDMVMYTVPFTKLQEKIKDECPEELFTIIMRR------------LMMQISEKIAEKYE 281
Query: 128 ITNIVI----GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ G + G C + + + V PL+ + K E +
Sbjct: 282 CQALITGESLGQVASQTIGALSCTDE-------------ATDMLVFRPLIGMDKQEIIDI 328
Query: 184 AQDIGGQDLVNLILEES 200
A I D+ E+
Sbjct: 329 AYKIDTYDISIEPYEDC 345
>gi|290474682|ref|YP_003467562.1| sulfur transfer protein (from cys to ThiS and from IscS to U8-tRNA)
[Xenorhabdus bovienii SS-2004]
gi|289173995|emb|CBJ80782.1| sulfur transfer protein (from cys to ThiS and from IscS to U8-tRNA)
[Xenorhabdus bovienii SS-2004]
Length = 482
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +AI + + + K+ D + V R + + ++ +A
Sbjct: 227 L--WNRFGSSHKVRFVAIDFE----PVVAEILEKVDDGQMG--VVLKR--MMVRASSRIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + S + PL+ K KL
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKL 327
Query: 184 AQDIGGQDLVNL 195
A++IG +D
Sbjct: 328 AREIGTEDFART 339
>gi|313675632|ref|YP_004053628.1| argininosuccinate synthase [Marivirga tractuosa DSM 4126]
gi|312942330|gb|ADR21520.1| argininosuccinate synthase [Marivirga tractuosa DSM 4126]
Length = 397
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 18/130 (13%)
Query: 9 PSALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D++ C L + + V + + G + EL+ KK+
Sbjct: 2 KKVVLAYSGGLDTTFCGLYLSKELGYEVHAVLVNTGGFSSEELKAVDAKAKKLGIASFTV 61
Query: 68 KDSLGEDH--ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
D L + ++ + G+I + + + + + A A
Sbjct: 62 IDCLETFYQNVIRFLVFGNILKN---QTYPLSVSTERIVQ-----------AQALAQYAK 107
Query: 125 RLGITNIVIG 134
+G + G
Sbjct: 108 EIGADALAHG 117
>gi|307265916|ref|ZP_07547465.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306919085|gb|EFN49310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 376
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
N ++K ++ SGG DSS ++ V ++
Sbjct: 10 NLSMQKNNRVVVGMSGGVDSSVAAYLLKEQGYEVIGVT 47
>gi|217978097|ref|YP_002362244.1| tRNA-specific 2-thiouridylase MnmA [Methylocella silvestris BL2]
gi|217503473|gb|ACK50882.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylocella silvestris BL2]
Length = 415
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 7/95 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V ++ Y + + C + I +
Sbjct: 31 RVVVAMSGGVDSSVVAALMKEQGYDVIAVTMQLYDHGEAIHRKGACCAGQDIQDARLVAA 90
Query: 69 DSLGEDHILPL------AILGDISHSSLTKNVAMK 97
++L ++ SHS T +
Sbjct: 91 RLDIPHYVLDYEERFREKVINPFSHSYATGETPIP 125
>gi|332160734|ref|YP_004297311.1| thiamine biosynthesis protein ThiI [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604613|emb|CBY26111.1| thiamine biosynthesis protein thiI [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664964|gb|ADZ41608.1| thiamine biosynthesis protein ThiI [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859970|emb|CBX70299.1| thiamine biosynthesis protein thiI [Yersinia enterocolitica W22703]
Length = 483
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 329 AREIGTEDF 337
>gi|238760653|ref|ZP_04621778.1| Thiamine biosynthesis protein thiI [Yersinia aldovae ATCC 35236]
gi|238701118|gb|EEP93710.1| Thiamine biosynthesis protein thiI [Yersinia aldovae ATCC 35236]
Length = 483
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 329 AREIGTEDF 337
>gi|238765449|ref|ZP_04626370.1| Thiamine biosynthesis protein thiI [Yersinia kristensenii ATCC
33638]
gi|238696343|gb|EEP89139.1| Thiamine biosynthesis protein thiI [Yersinia kristensenii ATCC
33638]
Length = 483
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 329 AREIGTEDF 337
>gi|123443359|ref|YP_001007333.1| thiamine biosynthesis protein ThiI [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|189030672|sp|A1JNR2|THII_YERE8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|122090320|emb|CAL13186.1| thiamine biosynthesis protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 483
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 329 AREIGTEDF 337
>gi|238787988|ref|ZP_04631784.1| Thiamine biosynthesis protein thiI [Yersinia frederiksenii ATCC
33641]
gi|238723936|gb|EEQ15580.1| Thiamine biosynthesis protein thiI [Yersinia frederiksenii ATCC
33641]
Length = 483
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 329 AREIGTEDF 337
>gi|332674135|gb|AEE70952.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori 83]
Length = 353
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 16 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 69
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 70 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 120
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 121 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 170
Query: 173 MWLKKYET 180
L K +
Sbjct: 171 GDLLKKDI 178
>gi|254478804|ref|ZP_05092171.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Carboxydibrachium pacificum DSM 12653]
gi|214035259|gb|EEB75966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Carboxydibrachium pacificum DSM 12653]
Length = 376
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
N ++K ++ SGG DSS ++ V ++
Sbjct: 10 NLSMQKNNRVVVGMSGGVDSSVAAYLLKEQGYEVIGVT 47
>gi|320016360|gb|ADV99931.1| sulfur transfer protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 483
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFIAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERHGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 329 ARQIGTEDF 337
>gi|296282975|ref|ZP_06860973.1| tRNA-specific 2-thiouridylase MnmA [Citromicrobium bathyomarinum
JL354]
Length = 384
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 24/139 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVEL 63
++ SGG DSS + A V ++ +DYG + C C I +
Sbjct: 24 SECRIVVAMSGGVDSSVVAALAAKTGADVVGITLQLYDYGAATGRKGAC--CAGDDIADA 81
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP-GR-NII-----F 115
++ S+ ++V + D+ L T VP R N+
Sbjct: 82 RAVADRLGIAHYVFDH-------ESAFRESVVEQFADDYLAGRTPVPCIRCNMGPKFTDL 134
Query: 116 LVFAATLAYRLGITNIVIG 134
L A L + G
Sbjct: 135 LTM----ARELDADCLATG 149
>gi|297380515|gb|ADI35402.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori v225d]
gi|308064111|gb|ADO05998.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori Sat464]
Length = 342
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|257452732|ref|ZP_05618031.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. 3_1_5R]
gi|257466593|ref|ZP_05630904.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium gonidiaformans ATCC 25563]
gi|315917748|ref|ZP_07913988.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium gonidiaformans ATCC 25563]
gi|317059273|ref|ZP_07923758.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_5R]
gi|313684949|gb|EFS21784.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_5R]
gi|313691623|gb|EFS28458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium gonidiaformans ATCC 25563]
Length = 345
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 56/196 (28%), Gaps = 32/196 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELM 64
+L SGG DS+ V + F +R + E++ + + +
Sbjct: 1 MKEKVILGMSGGVDSAVAAYLLQKNGYDVIAVHFSVHKTERTQEEVKDSQTIANQFSIPL 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ + L +I + D+++ A
Sbjct: 61 YSYCLEKEFQEKIISYYLTEIEK--GRTPSPCPLCDDSVK-----------FHLLFQEAE 107
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------------INLGMESHVTVHTPL 172
+ G + G + S + ++ A L E + PL
Sbjct: 108 KHGAKYVATGHYASISSN-----NVFKTSLLEANHHIHKDQCYMLYRLSSEKLKRILFPL 162
Query: 173 MWLKKYETWKLAQDIG 188
L+K E ++A+ IG
Sbjct: 163 SSLEKSEVREIARKIG 178
>gi|183601045|ref|ZP_02962538.1| hypothetical protein PROSTU_04666 [Providencia stuartii ATCC 25827]
gi|188019383|gb|EDU57423.1| hypothetical protein PROSTU_04666 [Providencia stuartii ATCC 25827]
Length = 483
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K+I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQIAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +A+ + + + K+ D + V R + + A+ +A
Sbjct: 227 L--WNRFGSSHKVRFIAVNFE----PVVAEILEKVDDGQMG--VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + S V PL+ K K+
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNASDTLVLRPLISHDKEHIIKI 327
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 328 ARQIGTEDF 336
>gi|332158483|ref|YP_004423762.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus sp. NA2]
gi|331033946|gb|AEC51758.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus sp. NA2]
Length = 273
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
+ +I+K+ A++ +SGG+DS+ L A +++ VE + D+G + +E V K
Sbjct: 45 LEEILKEIDRAIVAYSGGKDSTVALYLAKEKYGIDVEAVLVDHGFMDPRAIENAREVTKY 104
Query: 60 I 60
+
Sbjct: 105 L 105
>gi|332672802|gb|AEE69619.1| tRNA methyltransferase [Helicobacter pylori 83]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|317181301|dbj|BAJ59085.1| argininosuccinate synthase [Helicobacter pylori F57]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|317179807|dbj|BAJ57593.1| argininosuccinate synthase [Helicobacter pylori F32]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|317178320|dbj|BAJ56108.1| argininosuccinate synthase [Helicobacter pylori F30]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|308062882|gb|ADO04769.1| argininosuccinate synthase [Helicobacter pylori Sat464]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|308061316|gb|ADO03204.1| argininosuccinate synthase [Helicobacter pylori Cuz20]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|315586002|gb|ADU40383.1| tRNA methyltransferase [Helicobacter pylori 35A]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|297379235|gb|ADI34122.1| argininosuccinate synthase [Helicobacter pylori v225d]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|261838884|gb|ACX98649.1| argininosuccinate synthase [Helicobacter pylori 52]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|261837468|gb|ACX97234.1| hypothetical protein KHP_0011 [Helicobacter pylori 51]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|217034699|ref|ZP_03440102.1| hypothetical protein HP9810_880g10 [Helicobacter pylori 98-10]
gi|216942839|gb|EEC22334.1| hypothetical protein HP9810_880g10 [Helicobacter pylori 98-10]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|188526823|ref|YP_001909510.1| argininosuccinate synthase [Helicobacter pylori Shi470]
gi|188143063|gb|ACD47480.1| argininosuccinate synthase [Helicobacter pylori Shi470]
Length = 350
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K AL LFSGG DS + +D+ V L F+ G
Sbjct: 2 KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38
>gi|149198169|ref|ZP_01875216.1| hypothetical protein LNTAR_15947 [Lentisphaera araneosa HTCC2155]
gi|149138771|gb|EDM27177.1| hypothetical protein LNTAR_15947 [Lentisphaera araneosa HTCC2155]
Length = 433
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 44/201 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPK-- 66
L L SGG DS A+ R V +++F+ Y Q EL ++ + I++
Sbjct: 199 LCLLSGGIDSPVAAFKAMQRGSHVNSITFESFPYTQ---PELIDKVAKLQTILDKFQDHP 255
Query: 67 ---WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ ++ E + + + L + + M++ +T V A
Sbjct: 256 AKFYACNMAESQKMIRDDCSERFRTILYRRIMMRV------STVV--------------A 295
Query: 124 YRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
L ++ G S + + + ++ V PL+ + K E
Sbjct: 296 EHLKTKALLTGEAVGQVAS----------QTLANMDTINRATNTLVLRPLVCMDKNEVIA 345
Query: 183 LAQDIGGQDLVNLILEESHTC 203
+A+ G D+ N ++ S +C
Sbjct: 346 IAEKAGTFDVSN--IQCSDSC 364
>gi|189220437|ref|YP_001941077.1| tRNA(Ile)-lysidine synthase MesJ [Methylacidiphilum infernorum V4]
gi|189187295|gb|ACD84480.1| tRNA(Ile)-lysidine synthase MesJ [Methylacidiphilum infernorum V4]
Length = 307
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 66/212 (31%), Gaps = 52/212 (24%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ ++ P A+L SGG DS L ++ R L F +G R E +
Sbjct: 13 EALESLPDAVLCGISGGVDSIVLLHSLVETGKRPIVLHFQHGWRQDEESDA--------- 63
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ + LG + L S +L KN AM R F A
Sbjct: 64 KLVEETAKELGVE------FLKGKSPRALPKNEAMARMQR--------YR---FFQSA-- 104
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------------SHVTVH 169
A N+V+ D + + G + V+
Sbjct: 105 -AENKNCFNLVLAHHADDQ----------VETFLMQLIRGTGSRGWGMDRITTLGKLVVY 153
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESH 201
PL+ K + + AQ + + E +H
Sbjct: 154 RPLLDFWKSDIIRFAQQRNFRWREDETNENTH 185
>gi|169849981|ref|XP_001831689.1| argininosuccinate synthetase [Coprinopsis cinerea okayama7#130]
gi|116507327|gb|EAU90222.1| argininosuccinate synthetase [Coprinopsis cinerea okayama7#130]
Length = 425
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ LL +SGG D+S L+W +++ V D GQ + + E K+
Sbjct: 1 MTDKGRVLLAYSGGLDTSCILAWLIEQGYEVYAFMADVGQ--EEDFEAARDKALKVGA 56
>gi|108563707|ref|YP_628023.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori HPAG1]
gi|107837480|gb|ABF85349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori HPAG1]
Length = 353
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 58/184 (31%), Gaps = 37/184 (20%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 16 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 69
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 70 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 120
Query: 128 ITNIVIG----VCETDYSGYP----DCRHD---TIRAIETAINLGMESHVTVHTPLMWLK 176
I G V E D Y D D + A+E E + PL L
Sbjct: 121 CEKIATGHYARVKEIDKVSYIQEAVDKTKDQSYFLYALEH------EVIAKLVFPLGDLL 174
Query: 177 KYET 180
K +
Sbjct: 175 KKDI 178
>gi|319781789|ref|YP_004141265.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167677|gb|ADV11215.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 396
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 50/191 (26%), Gaps = 15/191 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS V ++ Y C + I +
Sbjct: 11 ENTRIVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRAGSCCAGQDIDDARR 70
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++L + ++ A P V + A
Sbjct: 71 VSETLGIPHYVLD---YEERFRKAVIDPFAESYVAGETPIPCVSCNQTVKFADLLATAKE 127
Query: 126 LGITNIVI------GVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKK 177
LG + G + Y R ++ + PL L K
Sbjct: 128 LGADALATGHYIRSGANGAQRALY---RPVDADRDQSYFLFATTQAQIDYLRFPLGGLSK 184
Query: 178 YETWKLAQDIG 188
+ +A+++G
Sbjct: 185 PQVRAIAEEMG 195
>gi|218961201|ref|YP_001740976.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
/ fibronectin/fibrinogen-binding protein [Candidatus
Cloacamonas acidaminovorans]
gi|167729858|emb|CAO80770.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
/ fibronectin/fibrinogen-binding protein [Candidatus
Cloacamonas acidaminovorans]
Length = 331
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 11/65 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-----------DYGQRNKVELECRLC 55
K A+ LFSGG DS + W + V + F +Y +N ++LE
Sbjct: 2 KTHKAIALFSGGLDSILAVKWMQSKGYAVHPVFFKAPYLLPERAINYAAKNAIDLEVIDV 61
Query: 56 VRKKI 60
+ I
Sbjct: 62 SEEHI 66
>gi|161353441|ref|NP_223972.2| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori J99]
gi|205371768|sp|Q9ZJQ0|MNMA_HELPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 342
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFINAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|308183444|ref|YP_003927571.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori PeCan4]
gi|308065629|gb|ADO07521.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori PeCan4]
Length = 342
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|188528124|ref|YP_001910811.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori Shi470]
gi|229486342|sp|B2UV99|MNMA_HELPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|188144364|gb|ACD48781.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori Shi470]
Length = 342
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|325103525|ref|YP_004273179.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pedobacter saltans DSM 12145]
gi|324972373|gb|ADY51357.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pedobacter saltans DSM 12145]
Length = 362
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 61/198 (30%), Gaps = 14/198 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V L+ DY E C I
Sbjct: 1 MSKHGRILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYASSGANSKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPLAI-LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ +IL + GD + N + PN V I
Sbjct: 61 DARSLAVGYGFPHYILDIRNEFGDY----VIDNFVDEYLAGRTPNPCVLCNTHIKWEALL 116
Query: 121 TLAYRLGITNIVIG----VCETDYSGY--PDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A +L I G + + D Y R + + E+ PL
Sbjct: 117 KRADKLDCEFIATGHYANIRQQDNGRYVISKGRDENKDQSYVLWGVSQENLARTKFPLGS 176
Query: 175 LKKYETWKLAQDIGGQDL 192
K E ++A D+G +DL
Sbjct: 177 FTKAEIRQMAFDMGQEDL 194
>gi|315587224|gb|ADU41605.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori 35A]
Length = 342
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|4155868|gb|AAD06840.1| putative TRNA
(5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE
[Helicobacter pylori J99]
Length = 360
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 23 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 76
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 77 ------LEVLDFQKDFKSAVYDEFINAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 127
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 128 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 177
Query: 173 MWLKKYET 180
L K +
Sbjct: 178 GDLLKKDI 185
>gi|317181057|dbj|BAJ58843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori F32]
Length = 342
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|308048596|ref|YP_003912162.1| (ThiS-adenylate) sulfurtransferase [Ferrimonas balearica DSM 9799]
gi|307630786|gb|ADN75088.1| (ThiS-adenylate) sulfurtransferase [Ferrimonas balearica DSM 9799]
Length = 484
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 65/192 (33%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS A+ R R F+ G E E + + E+
Sbjct: 175 PIGTQEDVLSLISGGFDSGVSTYQAIKRGTRTHYCFFNLG---GAEHE------RGVKEV 225
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ G H + + + + + ++ + + V R + + AA +A
Sbjct: 226 AYYLWNKFGSSHRVRFISVPF---EPVVEEILERVDNGQMG--VVLKR--MMMKVAAEVA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I +V G S T+ + I+ ++ + PL+ K E
Sbjct: 279 ARFDIPALVTGEAMGQVSS------QTLTNLN-VIDRATDT--VILRPLITWDKQEIVDT 329
Query: 184 AQDIGGQDLVNL 195
A+ IG +
Sbjct: 330 ARAIGTAPFAEV 341
>gi|218460955|ref|ZP_03501046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhizobium etli Kim 5]
Length = 353
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 52/193 (26%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 23 RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 82
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 83 TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 139
Query: 129 TNIVIGV-----------CETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
+ G + + R ++ + PL L
Sbjct: 140 DALATGHYIRSRPNPSPEHPGRRALF---RPADADRDQSYFLFATTQQQIDYLRFPLGGL 196
Query: 176 KKYETWKLAQDIG 188
K ET +LA+++G
Sbjct: 197 PKAETRRLAEEMG 209
>gi|14520772|ref|NP_126247.1| hypothetical protein PAB1992 [Pyrococcus abyssi GE5]
gi|5457988|emb|CAB49478.1| Predicted ATPase of the PP-loop superfamily [Pyrococcus abyssi
GE5]
Length = 260
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
LLLFSGG+DSS L + V L+F
Sbjct: 20 EKKVLLLFSGGKDSSLALYILKEAGYDVSALTF 52
>gi|294504903|ref|YP_003568965.1| thiamine biosynthesis protein [Yersinia pestis Z176003]
gi|262362969|gb|ACY59690.1| thiamine biosynthesis protein [Yersinia pestis D106004]
gi|294355362|gb|ADE65703.1| thiamine biosynthesis protein [Yersinia pestis Z176003]
Length = 464
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 155 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 208
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 209 LWNRFGSSHRVRFIAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 258
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 259 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 309
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 310 ARQIGTEDF 318
>gi|167469773|ref|ZP_02334477.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis FV-1]
Length = 470
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 161 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 214
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 215 LWNRFGSSHRVRFIAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 264
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 265 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 315
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 316 ARQIGTEDF 324
>gi|119608342|gb|EAW87936.1| argininosuccinate synthetase, isoform CRA_d [Homo sapiens]
Length = 370
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D + S +L +SGG D+S L W ++ V + GQ+ E + ++ +
Sbjct: 39 DAMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEARKKALKLGAKK 98
Query: 63 LMPKWK 68
++ W+
Sbjct: 99 VIAPWR 104
>gi|51595293|ref|YP_069484.1| thiamine biosynthesis protein ThiI [Yersinia pseudotuberculosis IP
32953]
gi|186894310|ref|YP_001871422.1| thiamine biosynthesis protein ThiI [Yersinia pseudotuberculosis
PB1/+]
gi|81825907|sp|Q66DV0|THII_YERPS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|238691416|sp|B2K6U1|THII_YERPB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|51588575|emb|CAH20183.1| thiamine biosynthesis protein thiI [Yersinia pseudotuberculosis IP
32953]
gi|186697336|gb|ACC87965.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pseudotuberculosis PB1/+]
Length = 483
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFIAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 329 ARQIGTEDF 337
>gi|22124919|ref|NP_668342.1| thiamine biosynthesis protein ThiI [Yersinia pestis KIM 10]
gi|45440607|ref|NP_992146.1| thiamine biosynthesis protein ThiI [Yersinia pestis biovar Microtus
str. 91001]
gi|108808658|ref|YP_652574.1| thiamine biosynthesis protein ThiI [Yersinia pestis Antiqua]
gi|108811080|ref|YP_646847.1| thiamine biosynthesis protein ThiI [Yersinia pestis Nepal516]
gi|145600067|ref|YP_001164143.1| thiamine biosynthesis protein ThiI [Yersinia pestis Pestoides F]
gi|149364981|ref|ZP_01887016.1| thiamine biosynthesis protein [Yersinia pestis CA88-4125]
gi|153948038|ref|YP_001402068.1| thiamine biosynthesis protein ThiI [Yersinia pseudotuberculosis IP
31758]
gi|162421286|ref|YP_001607436.1| thiamine biosynthesis protein ThiI [Yersinia pestis Angola]
gi|165926649|ref|ZP_02222481.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165936029|ref|ZP_02224599.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Orientalis str. IP275]
gi|166010975|ref|ZP_02231873.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212987|ref|ZP_02239022.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167399413|ref|ZP_02304937.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421633|ref|ZP_02313386.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423450|ref|ZP_02315203.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|170025467|ref|YP_001721972.1| thiamine biosynthesis protein ThiI [Yersinia pseudotuberculosis
YPIII]
gi|218930203|ref|YP_002348078.1| thiamine biosynthesis protein ThiI [Yersinia pestis CO92]
gi|229838778|ref|ZP_04458937.1| sulfur transfer protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896068|ref|ZP_04511238.1| sulfur transfer protein [Yersinia pestis Pestoides A]
gi|229899346|ref|ZP_04514489.1| sulfur transfer protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901307|ref|ZP_04516429.1| sulfur transfer protein [Yersinia pestis Nepal516]
gi|270489499|ref|ZP_06206573.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis KIM D27]
gi|20140626|sp|Q8ZC49|THII_YERPE RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|123072664|sp|Q1C4J3|THII_YERPA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|123246671|sp|Q1CL83|THII_YERPN RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|189030673|sp|A7FLE0|THII_YERP3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|189030674|sp|A4TPF8|THII_YERPP RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|238687255|sp|A9QZR9|THII_YERPG RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|238688408|sp|B1JID5|THII_YERPY RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|21957756|gb|AAM84593.1|AE013704_10 putative oxidoreductase [Yersinia pestis KIM 10]
gi|45435464|gb|AAS61023.1| thiamine biosynthesis protein [Yersinia pestis biovar Microtus str.
91001]
gi|108774728|gb|ABG17247.1| thiamine biosynthesis protein [Yersinia pestis Nepal516]
gi|108780571|gb|ABG14629.1| thiamine biosynthesis protein [Yersinia pestis Antiqua]
gi|115348814|emb|CAL21768.1| thiamine biosynthesis protein [Yersinia pestis CO92]
gi|145211763|gb|ABP41170.1| thiamine biosynthesis protein [Yersinia pestis Pestoides F]
gi|149291394|gb|EDM41468.1| thiamine biosynthesis protein [Yersinia pestis CA88-4125]
gi|152959533|gb|ABS46994.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pseudotuberculosis IP 31758]
gi|162354101|gb|ABX88049.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis Angola]
gi|165916174|gb|EDR34781.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921577|gb|EDR38774.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165989975|gb|EDR42276.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205774|gb|EDR50254.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960552|gb|EDR56573.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051917|gb|EDR63325.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167057620|gb|EDR67366.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|169752001|gb|ACA69519.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pseudotuberculosis YPIII]
gi|229681236|gb|EEO77330.1| sulfur transfer protein [Yersinia pestis Nepal516]
gi|229687748|gb|EEO79821.1| sulfur transfer protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695144|gb|EEO85191.1| sulfur transfer protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700991|gb|EEO89020.1| sulfur transfer protein [Yersinia pestis Pestoides A]
gi|270338003|gb|EFA48780.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
pestis KIM D27]
Length = 483
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFIAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 329 ARQIGTEDF 337
>gi|313126312|ref|YP_004036582.1| thiamine biosynthesis ATP pyrophosphatase [Halogeometricum
borinquense DSM 11551]
gi|312292677|gb|ADQ67137.1| thiamine biosynthesis ATP pyrophosphatase [Halogeometricum
borinquense DSM 11551]
Length = 387
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 36/191 (18%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPKWKD 69
+L SGG DS + R + D YG + R + I L +
Sbjct: 183 VLVSGGIDSPVAAWRLMRRGCIPIPVYVDLGEYGG-----ADHRARAFEVIRTLAARAPG 237
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
++ S + + ++ + + + R LV A +A R G
Sbjct: 238 EDLRPRVVD--------GSDVVDRLIAEVSETRMLS----LRRA-MLVMAEAVARRDGAH 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGM---ESHVTVHTPLMWLKKYETWKLAQD 186
++ G ++ +T NL + + + +H PL+ K + A+
Sbjct: 285 SVATGEALGQ------------KSSQTGANLAVTDEAATMPIHRPLLTTDKSDIVAEARR 332
Query: 187 IGGQDLVNLIL 197
IG D L +
Sbjct: 333 IGTYDDSTLPV 343
>gi|217033651|ref|ZP_03439079.1| hypothetical protein HP9810_899g87 [Helicobacter pylori 98-10]
gi|216943997|gb|EEC23431.1| hypothetical protein HP9810_899g87 [Helicobacter pylori 98-10]
Length = 342
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|257468460|ref|ZP_05632554.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium ulcerans ATCC 49185]
gi|317062723|ref|ZP_07927208.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium ulcerans ATCC 49185]
gi|313688399|gb|EFS25234.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium ulcerans ATCC 49185]
Length = 333
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++K AL LFSGG DS+ + D+ V L+F
Sbjct: 1 MEKKIKALALFSGGLDSALAVKVVKDQGVEVVALNF 36
>gi|284931128|gb|ADC31066.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
str. F]
Length = 657
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
++ P ++ SGG DS+ C + V
Sbjct: 284 QEKPRVVVALSGGVDSAVCAYLLQQQGYDVVA 315
>gi|262066347|ref|ZP_06025959.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium periodonticum ATCC 33693]
gi|291379911|gb|EFE87429.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium periodonticum ATCC 33693]
Length = 343
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/198 (12%), Positives = 52/198 (26%), Gaps = 41/198 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ + ++ E + KK+ + +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLN---QHLEESSKDIEDAKKVCDRLGIIH 58
Query: 69 DSLGEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + ++ + S I D+ + +A +
Sbjct: 59 EVVNIRKNFENIVIKYFLDGYKSGKTPSPCVICDDEIK-----------FKILFEVANKY 107
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIET----------------AINLGMESHVTVHT 170
+ G T + L E +
Sbjct: 108 KADYVATG-HYT--------SVEYSETFSKYLLKSVHSIIKDQSYMLYRLAPEKLERLIF 158
Query: 171 PLMWLKKYETWKLAQDIG 188
PL K E ++A IG
Sbjct: 159 PLKPYSKQEIREIALKIG 176
>gi|147678963|ref|YP_001213178.1| PP family ATPase [Pelotomaculum thermopropionicum SI]
gi|146275060|dbj|BAF60809.1| ATP-utilizing enzymes of the PP-loop superfamily [Pelotomaculum
thermopropionicum SI]
Length = 359
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 62/191 (32%), Gaps = 39/191 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+I+K S L+ FSGG DS+ L A D D+V ++
Sbjct: 100 EILKSCGSVLVAFSGGADSTLLLKVARDVLGDKVLAVT-----------AASEIYPPGEA 148
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ ++G +HI+ S+ +N + +
Sbjct: 149 AEAGELARAIGAEHIV---FTAKGLKSAAFRNNPPDRCYHCKKEIY---------TELLK 196
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLKKYE 179
LA GI + GV D + Y R IRA + V PL L K E
Sbjct: 197 LARERGIKCVADGVNADDAADY---RPG-IRA---------GIELGVKAPLKEAGLTKQE 243
Query: 180 TWKLAQDIGGQ 190
L++ +G
Sbjct: 244 IHALSRQLGLP 254
>gi|86147425|ref|ZP_01065737.1| thiamine biosynthesis protein ThiI [Vibrio sp. MED222]
gi|218710364|ref|YP_002417985.1| thiamine biosynthesis protein ThiI [Vibrio splendidus LGP32]
gi|254784241|sp|B7VJ96|THII_VIBSL RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|85834718|gb|EAQ52864.1| thiamine biosynthesis protein ThiI [Vibrio sp. MED222]
gi|218323383|emb|CAV19560.1| Thiamine biosynthesis protein thiI [Vibrio splendidus LGP32]
Length = 482
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 25/184 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS + R +V F+ G K++ + S
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHYLWDKYGSS 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ + + ++ + ++D + V R +F+ +A R GI +
Sbjct: 235 AKVKFISIDFEPVVA------EILENVEDGQMG--VVLKR--MFMRAGGMVAERFGIEAL 284
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G S + + ++ + + PL+ K + L++ IG +D
Sbjct: 285 VTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIDLSRKIGTED 335
Query: 192 LVNL 195
+
Sbjct: 336 FAKV 339
>gi|84394350|ref|ZP_00993071.1| thiamine biosynthesis protein ThiI [Vibrio splendidus 12B01]
gi|84375009|gb|EAP91935.1| thiamine biosynthesis protein ThiI [Vibrio splendidus 12B01]
Length = 482
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 25/184 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS + R +V F+ G K++ + S
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHYLWDKYGSS 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ + + ++ + ++D + V R +F+ +A R GI +
Sbjct: 235 AKVKFISIDFEPVVA------EILENVEDGQMG--VVLKR--MFMRAGGMVAERFGIEAL 284
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G S + + ++ + + PL+ K + L++ IG +D
Sbjct: 285 VTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIDLSRKIGTED 335
Query: 192 LVNL 195
+
Sbjct: 336 FAKV 339
>gi|205822484|sp|Q1CRS3|MNMA_HELPH RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 342
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 58/184 (31%), Gaps = 37/184 (20%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYP----DCRHD---TIRAIETAINLGMESHVTVHTPLMWLK 176
I G V E D Y D D + A+E E + PL L
Sbjct: 110 CEKIATGHYARVKEIDKVSYIQEAVDKTKDQSYFLYALEH------EVIAKLVFPLGDLL 163
Query: 177 KYET 180
K +
Sbjct: 164 KKDI 167
>gi|237738366|ref|ZP_04568847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium mortiferum ATCC 9817]
gi|229420246|gb|EEO35293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium mortiferum ATCC 9817]
Length = 333
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKI 60
++K AL LFSGG DS+ + D+ V L+F +G +N+ + + K+
Sbjct: 1 MEKKRRALALFSGGLDSALAIKVIKDQGIDVIALNFVSHFFGGKNEKAEKMAEQLGIKV 59
>gi|229586563|ref|YP_002845064.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia africae ESF-5]
gi|259495837|sp|C3PN11|MNMA_RICAE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|228021613|gb|ACP53321.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia africae ESF-5]
Length = 365
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 1 MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 61 IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 117
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + G +G D + ++ A + + +
Sbjct: 118 I------KTARELGADKLATGHYVRKING--DNGAELHTGLDPAKDQSYFLFTTTKEQLE 169
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL L K ET KLA G
Sbjct: 170 YLRFPLGGLTKDETRKLASKFG 191
>gi|85860332|ref|YP_462534.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Syntrophus aciditrophicus SB]
gi|123517346|sp|Q2LWA6|MNMA1_SYNAS RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|85723423|gb|ABC78366.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Syntrophus aciditrophicus SB]
Length = 372
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + V ++ G R + E + R C R+ I +
Sbjct: 20 KKRVLLAISGGVDSSVAALLLKEEGYEVAGVTMCLGVR-EEENKVRCCGREAIEDARGVC 78
Query: 68 KDSLGEDHILPLAIL 82
+ ++L A L
Sbjct: 79 EILGIPHYVLDYAPL 93
>gi|150015449|ref|YP_001307703.1| ExsB family protein [Clostridium beijerinckii NCIMB 8052]
gi|149901914|gb|ABR32747.1| ExsB family protein [Clostridium beijerinckii NCIMB 8052]
Length = 274
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 67/193 (34%), Gaps = 43/193 (22%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L FSGG DS+ L A + D V+ ++ + +PKW+
Sbjct: 19 KVVLAFSGGVDSTFLLRVAKEALGDNVKAVTI-------------------LSPYIPKWE 59
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + + L + +I + + ++ +D L T V +A G
Sbjct: 60 IAEARELVRELGVQHEIIEAPIIDSIKFNPEDRCYLCKTAV-------FTMILNVAKEQG 112
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYETWKLAQ 185
++ G D S Y R ++A+ + V +PL+ L K E ++
Sbjct: 113 YNCVIDGTNFDDISDY---RPG-LKAL---------KELEVRSPLLECKLTKAEIRAFSK 159
Query: 186 DIGGQDLVNLILE 198
++G
Sbjct: 160 ELGLNTWDKPPYA 172
>gi|223984458|ref|ZP_03634592.1| hypothetical protein HOLDEFILI_01886 [Holdemania filiformis DSM
12042]
gi|223963582|gb|EEF67960.1| hypothetical protein HOLDEFILI_01886 [Holdemania filiformis DSM
12042]
Length = 398
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 69/203 (33%), Gaps = 37/203 (18%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ALL+ SGG DS + R +E + + +KK+++L
Sbjct: 173 PVGMGGKALLMLSGGIDSPVAGYLTMKRGVEIECIHY------ASPPYTSSSAQKKVLDL 226
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G + HI+PL L + ++ A+ I + A
Sbjct: 227 AGIISKYQGSIKVHIIPLTDLQLAIYKHCDESYAITIMRR------------MMYRIAER 274
Query: 122 LAYRLGITNIV----IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A + IV IG + T+ +++T ++ + V P++ K
Sbjct: 275 AAQKYKCLAIVNGESIGQVAS----------QTLESMQTINHVI---DMPVIRPVVTYDK 321
Query: 178 YETWKLAQDIGGQDLVNLILEES 200
E +A+ I + L E+
Sbjct: 322 LEIIDVARRINTYETSILPFEDC 344
>gi|300771093|ref|ZP_07080969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingobacterium spiritivorum ATCC 33861]
gi|300761763|gb|EFK58583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingobacterium spiritivorum ATCC 33861]
Length = 363
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V ++ DY E C I
Sbjct: 1 MSKRGRVLVAMSGGVDSSVAAVMLHEQGYEVIGITMKTWDYASSGGSSKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPL 79
+ + IL +
Sbjct: 61 DARALAVNYGFPHFILDI 78
>gi|227540270|ref|ZP_03970319.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingobacterium spiritivorum ATCC 33300]
gi|227239914|gb|EEI89929.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingobacterium spiritivorum ATCC 33300]
Length = 363
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V ++ DY E C I
Sbjct: 1 MSKRGRVLVAMSGGVDSSVAAVMLHEQGYEVIGITMKTWDYASSGGSSKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPL 79
+ + IL +
Sbjct: 61 DARALAVNYGFPHFILDI 78
>gi|197303725|ref|ZP_03168762.1| hypothetical protein RUMLAC_02454 [Ruminococcus lactaris ATCC
29176]
gi|197297245|gb|EDY31808.1| hypothetical protein RUMLAC_02454 [Ruminococcus lactaris ATCC
29176]
Length = 406
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 60/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
I SA+LL SGG DS R +E F + K +
Sbjct: 185 PIGTNGSAMLLLSGGIDSPVAGYMIAKRGVEIEATYF-----HAPPYTSERAKEKVVDLA 239
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ + + + I I + + ++ + A
Sbjct: 240 RLVSAYAGPIKLHVVNFTDIQLAIYEKCPHDELTIIMRRY-------------MMKIAEH 286
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + G ++ G + T++++ + + V+ PL+ K E
Sbjct: 287 FAKKDGCLGLITGESIGQVAS------QTMQSLNATNAVCT---LPVYRPLIGFDKKEIV 337
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ I + E+
Sbjct: 338 EISEKINTYETSIQPFEDC 356
>gi|254459256|ref|ZP_05072678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacterales bacterium GD 1]
gi|207084149|gb|EDZ61439.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacterales bacterium GD 1]
Length = 344
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 56/192 (29%), Gaps = 30/192 (15%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DSS V + Y + + + + + K
Sbjct: 1 MNKKVIVGMSGGIDSSVTAYLLQQEGYEVIGV---YMKLH----DLIENFHEDNIASGKK 53
Query: 67 WKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAY 124
SLG + HIL L+ + + + N PN V R I F A
Sbjct: 54 VARSLGIEYHILDLS---SKFKEEVYDYFVGEYLNGNTPNPCVKCNRTIKFGAL-FDFAK 109
Query: 125 RLGITNIVIGVCE-TDYSGYPDCRHDTIRAIET--------AINLGMESHVTVHTPLMWL 175
G + G TD + I E + + + P+
Sbjct: 110 EQGADFLATGHYAKTDG--------EFIYKAEDDTKDQSYFLAQIKQDVLKHLIFPMNKY 161
Query: 176 KKYETWKLAQDI 187
+K E KL +
Sbjct: 162 RKTEIVKLGSTL 173
>gi|326566320|gb|EGE16471.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 12P80B1]
gi|326569496|gb|EGE19556.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis BC8]
gi|326574039|gb|EGE23988.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis CO72]
gi|326577322|gb|EGE27209.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis O35E]
Length = 496
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 43/198 (21%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVE 62
+ L L SGG DSS + R RV F+ GQ + EL +
Sbjct: 183 PMSTQEDVLSLISGGFDSSVASHMFMRRGSRVHYCFFNLGGQAH--ELGVKQMAYH---- 236
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
W + + + + + + K + V R + + A+ +
Sbjct: 237 ---LWSRYSLSHKVWFITVDFEPVVAEILKTIDDGHMG------VVLKR--MMVKAASQI 285
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMW 174
A ++ I +V G A+ + + + + PL+
Sbjct: 286 AQQIKIQALVTG-----------------EAMGQVASQTLTNLNAIDAASSTLILRPLIT 328
Query: 175 LKKYETWKLAQDIGGQDL 192
K + K+A+ IG ++
Sbjct: 329 SDKEDIIKMAEKIGTANI 346
>gi|328472525|gb|EGF43388.1| tRNA s(4)U8 sulfurtransferase [Vibrio parahaemolyticus 10329]
Length = 482
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|153840266|ref|ZP_01992933.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
parahaemolyticus AQ3810]
gi|149746068|gb|EDM57198.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
parahaemolyticus AQ3810]
Length = 366
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|28897465|ref|NP_797070.1| thiamine biosynthesis protein ThiI [Vibrio parahaemolyticus RIMD
2210633]
gi|260876426|ref|ZP_05888781.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
parahaemolyticus AN-5034]
gi|31077023|sp|Q87RT6|THII_VIBPA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|28805677|dbj|BAC58954.1| thiamin biosynthesis protein ThiI [Vibrio parahaemolyticus RIMD
2210633]
gi|308093006|gb|EFO42701.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
parahaemolyticus AN-5034]
Length = 482
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|150402404|ref|YP_001329698.1| PP-loop domain-containing protein [Methanococcus maripaludis C7]
gi|150033434|gb|ABR65547.1| PP-loop domain protein [Methanococcus maripaludis C7]
Length = 296
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIV 61
++ K +++ SGG+DS+ L+ A D V + F +K + KK+
Sbjct: 33 ELNLKDEKIVVMLSGGKDSAVALAIAKDLGLNVHLCVHF----VHKWSWDISTNEAKKLA 88
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHS 88
+ L G S
Sbjct: 89 DRFNVPIIFPDITEELAKKTQGAKGKS 115
>gi|86359043|ref|YP_470935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhizobium etli CFN 42]
gi|123510891|sp|Q2K4M8|MNMA_RHIEC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|86283145|gb|ABC92208.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferaseprotein
[Rhizobium etli CFN 42]
Length = 408
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 57/194 (29%), Gaps = 22/194 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 23 RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARHVCE 82
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 83 TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 139
Query: 129 TNIVIGVC-------ETDYSGYPDCRHDTIRAIETA------INLGMESHVT-VHTPLMW 174
+ G +++ G R R + + + + + PL
Sbjct: 140 DALATGHYIRSRPNPSSEHPG----RRALFRPADADRDQSYFLFATTQEQIDYLRFPLGG 195
Query: 175 LKKYETWKLAQDIG 188
L K ET +LA+++G
Sbjct: 196 LPKAETRRLAEEMG 209
>gi|302036488|ref|YP_003796810.1| putative thiamine biosynthesis protein ThiI [Candidatus Nitrospira
defluvii]
gi|300604552|emb|CBK40884.1| putative Thiamine biosynthesis protein ThiI [Candidatus Nitrospira
defluvii]
Length = 392
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 59/178 (33%), Gaps = 29/178 (16%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L SGG DS + R + + F L R K V+ + + +
Sbjct: 183 CLISGGIDSPVAAYRMMKRGCKAVFVHFS-----GRPLVSRDSEEK--VQELVQLLTAYQ 235
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYRLGITN 130
L + G+I + N P F V R I + A LA R G
Sbjct: 236 YHSQLYIVPFGEIQREIVA----------NAPAAFRVVLYR-RIMVRIAEELARRHGCWA 284
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+V G + + + +E A L + PL+ + K E + AQ IG
Sbjct: 285 LVTGDSLGQVAS---QTPENLSVVEAAAEL------PLLRPLIGMDKIEITEQAQQIG 333
>gi|301106300|ref|XP_002902233.1| tRNA(Ile)-lysidine synthase, putative [Phytophthora infestans
T30-4]
gi|262098853|gb|EEY56905.1| tRNA(Ile)-lysidine synthase, putative [Phytophthora infestans
T30-4]
Length = 665
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 43/197 (21%)
Query: 13 LLFSGGQDSSTCLSWAL----DRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ SGG DS D + + DYG R + EC + + +W
Sbjct: 229 VSLSGGVDSMVVAYLMHKLKEKHGDFTIVAVHLDYGNRPESGAEC---------DYVRRW 279
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ G + + + ++ ++ ++ KI +T+ A +
Sbjct: 280 CERFGI--VFHVRRIDEVKRATTRRDDYEKISREIRYSTY---------------AEVMQ 322
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAI---------ETAINLGMESHVTVHTPLMWLKKY 178
+I G+C + G D + + I + + + V + PL+ L+K
Sbjct: 323 KYHI-PGMCFGHHRG--DVQENVISNMMKGLSLLNLNGMQASSVVNGVRIWRPLLDLEKD 379
Query: 179 ETWKLAQDIGGQDLVNL 195
++ A G +
Sbjct: 380 VIFEFAHRYGVPYFKDT 396
>gi|120599623|ref|YP_964197.1| thiamine biosynthesis protein ThiI [Shewanella sp. W3-18-1]
gi|146292383|ref|YP_001182807.1| thiamine biosynthesis protein ThiI [Shewanella putrefaciens CN-32]
gi|189030652|sp|A4Y4X5|THII_SHEPC RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|189030655|sp|A1RLU8|THII_SHESW RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|120559716|gb|ABM25643.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
sp. W3-18-1]
gi|145564073|gb|ABP75008.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
putrefaciens CN-32]
gi|319425683|gb|ADV53757.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
putrefaciens 200]
Length = 484
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R F+ G + E+ +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-AQHEIGVKQVAYH----- 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +++ + + + + + V R + + AA +A
Sbjct: 229 --LWKTYGESHKVKFVSVPFEPVVAEILEKIDNGQMG------VVLKR--MMMRTAARIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
RLGI +V G S T+ + I+ E + + PL+ + K +
Sbjct: 279 ERLGIQALVTGESLGQVSS------QTLTNLN-VIDRCTE--LLILRPLIAMDKQDIINE 329
Query: 184 AQDIGGQDL 192
++ IG +D
Sbjct: 330 SRRIGTEDF 338
>gi|289578840|ref|YP_003477467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter italicus Ab9]
gi|289528553|gb|ADD02905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter italicus Ab9]
Length = 364
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+KK ++ SGG DSS ++ V ++
Sbjct: 1 MKKNNRVVVGMSGGVDSSVSAYLLKEQGYEVIGVT 35
>gi|253581434|ref|ZP_04858659.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium varium ATCC 27725]
gi|251836504|gb|EES65039.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium varium ATCC 27725]
Length = 333
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++K AL LFSGG DS+ + D+ V L+F
Sbjct: 1 MEKKIKALALFSGGLDSALAVKVIKDQGVEVIALNF 36
>gi|307638008|gb|ADN80458.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyl transferase
[Helicobacter pylori 908]
gi|325996611|gb|ADZ52016.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Helicobacter pylori 2018]
gi|325998201|gb|ADZ50409.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Helicobacter pylori 2017]
Length = 342
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFINAYEEGQTPN---PCALCNPLMKFGLALKHALKLG 109
Query: 128 ITNIVIG 134
I G
Sbjct: 110 CEKIATG 116
>gi|162448041|ref|YP_001621173.1| thiamine biosynthesis protein ThiI [Acholeplasma laidlawii PG-8A]
gi|189030612|sp|A9NHG7|THII_ACHLI RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|161986148|gb|ABX81797.1| thiamine biosynthesis ATP pyrophosphatase [Acholeplasma laidlawii
PG-8A]
Length = 412
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 68/196 (34%), Gaps = 25/196 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE-LECRLCVRKKIVELMPKWK 68
L++ SGG DS + + VE F+ +E ++ + + KK+ P K
Sbjct: 177 KGLVMLSGGIDSPVAAHLMMKQGIDVELFHFESTPLTPLESVQKVIEIAKKLAYYTPYNK 236
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L H++P + + S + + I +F A + G+
Sbjct: 237 IKL---HLVPFTKIHEAILSYVADPYIITIMRR------------MFYRLGEIYANQHGL 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
++ G + + + + + + + + P++ K + +++ I
Sbjct: 282 DTLINGESVGQVAS---------QTLSSIKVIENVTSIPILRPVITYDKNDIINISKKID 332
Query: 189 GQDLVNLILEESHTCY 204
D+ L + + Y
Sbjct: 333 TYDISILPFNDCCSIY 348
>gi|159905260|ref|YP_001548922.1| argininosuccinate synthase [Methanococcus maripaludis C6]
gi|159886753|gb|ABX01690.1| Argininosuccinate synthase [Methanococcus maripaludis C6]
Length = 397
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 34/196 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A+L +SGG D+S CL D++ +V +++ D GQ + +E +K
Sbjct: 2 QEKIAVLAYSGGLDTSCCLKLLEDKYDYKVISVAVDVGQPEEDLIEPEEKAKK------- 54
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + + + + + + + P + R +I + A LA
Sbjct: 55 ---FGVLKHYTIDAKE--EFAKDYIFRAIKANALYEGYPLSTALARPLIAIKIA-ELAEE 108
Query: 126 LGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL--MWLKKYE 179
+G + I G C E+ + + + P+ + L + E
Sbjct: 109 VGASAISHG-----------CTGKGNDQF--RFESVMRAKT-PEIEIVAPIRDLNLTRTE 154
Query: 180 TWKLAQDIGGQDLVNL 195
+ A++ G VNL
Sbjct: 155 EIEYAREKGIPVPVNL 170
>gi|119468496|ref|ZP_01611587.1| thiamine biosynthesis protein ThiI [Alteromonadales bacterium TW-7]
gi|119448004|gb|EAW29269.1| thiamine biosynthesis protein ThiI [Alteromonadales bacterium TW-7]
Length = 485
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R L F+ G + K
Sbjct: 176 PLPTQEDVLSLMSGGFDSGVASYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASY 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + + + + + + +NV V R + + + +A
Sbjct: 229 F-LWKKYSSTHKVKFITVDFEPVVAEILENVENSQMG------VVLKR--MMMRAGSAVA 279
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+L I +V G S + + + + + PL+ K E +
Sbjct: 280 EKLNIQALVTGESIGQVSS---------QTLANLSVIDRVTETLILRPLIQHDKQEIINI 330
Query: 184 AQDIGGQDLVNL 195
A+ IG ++
Sbjct: 331 ARQIGTAEMAET 342
>gi|254779876|ref|YP_003057982.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori B38]
gi|254001788|emb|CAX30019.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori B38]
Length = 342
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFINAYEEGQTPN---PCALCNPLMKFGLALDHALQLG 109
Query: 128 ITNIVIG 134
I G
Sbjct: 110 CEKIATG 116
>gi|226324637|ref|ZP_03800155.1| hypothetical protein COPCOM_02422 [Coprococcus comes ATCC 27758]
gi|225207085|gb|EEG89439.1| hypothetical protein COPCOM_02422 [Coprococcus comes ATCC 27758]
Length = 393
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 63/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I +A+LL SGG DS R +E F + ++K+V+L
Sbjct: 176 PIGTNGTAMLLLSGGIDSPVAGYMISKRGVGLEATYF-----HAPPYTSE-RAKQKVVDL 229
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ G + H++ + + + I + A
Sbjct: 230 AKQVSKYTGPIKLHVVNFTDIQLYIYEKCPHDELTIIMRRY------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A G ++ G + + +++ + + V+ PL+ K E
Sbjct: 278 FAKEDGCLGLITGESIGQVAS---------QTMQSLMATNDVCTLPVYRPLIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+++ IG + L E+
Sbjct: 329 DISEKIGTYETSILPYEDC 347
>gi|15892333|ref|NP_360047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia conorii str. Malish 7]
gi|20455354|sp|Q92IL0|MNMA_RICCN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|15619478|gb|AAL02948.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia conorii str. Malish 7]
Length = 370
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 6 MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 65
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L + S+ N P N V R++
Sbjct: 66 IYDAKMVANKLGIPHYVLD---YENKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 122
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + G +G D + ++ A + + +
Sbjct: 123 I------KTARELGADKLATGHYVRKING--DNGAELHTGLDPAKDQSYFLFTTTKEQLE 174
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL L K ET KLA G
Sbjct: 175 YLRFPLGGLTKDETRKLASKFG 196
>gi|226946597|ref|YP_002801670.1| thiamine biosynthesis protein ThiI [Azotobacter vinelandii DJ]
gi|259518543|sp|C1DHW2|THII_AZOVD RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|226721524|gb|ACO80695.1| thiamine biosynthesis/tRNA modification protein ThiI [Azotobacter
vinelandii DJ]
Length = 484
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 60/188 (31%), Gaps = 35/188 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R F+ G R EL E + +K
Sbjct: 183 LVLMSGGFDSTVAAFQTMRRGLMTHFCFFNLGGRAH-ELGVMEVAHYLWQKYGSSQRVLF 241
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
S+ + ++ G+I + + ++ + L A +A RL I
Sbjct: 242 VSVPFEEVV-----GEILGKVDNSQMGVILKR-------------MMLRAATRVAERLKI 283
Query: 129 TNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+V G + + P + + + V PL+ K + A
Sbjct: 284 DALVTGEAISQVSSQTLP-----------NLSVIDSATDMLVLRPLIASHKQDIIDTATR 332
Query: 187 IGGQDLVN 194
IG +
Sbjct: 333 IGTAEFAR 340
>gi|297545060|ref|YP_003677362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842835|gb|ADH61351.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 364
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+KK ++ SGG DSS ++ V ++
Sbjct: 1 MKKNNRVVVGMSGGVDSSVSAYLLKEQGYEVIGVT 35
>gi|238650755|ref|YP_002916609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia peacockii str. Rustic]
gi|259495838|sp|C4K1W0|MNMA_RICPU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|238624853|gb|ACR47559.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia peacockii str. Rustic]
Length = 365
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 1 MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNSCCAGQD 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 61 IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 117
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + G +G D + ++ A + + + +
Sbjct: 118 I------KTARELGADKLATGHYVRKING--DNGAELHTGLDPAKDQSYFLFMTTKEQLE 169
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL L K ET KLA G
Sbjct: 170 YLRFPLGGLTKGETRKLASKFG 191
>gi|255532078|ref|YP_003092450.1| tRNA-specific 2-thiouridylase MnmA [Pedobacter heparinus DSM
2366]
gi|255345062|gb|ACU04388.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pedobacter heparinus DSM 2366]
Length = 363
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V L+ DY E C I
Sbjct: 1 MSKKGRILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYATSGSSSKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPL 79
+ + +IL +
Sbjct: 61 DARTLAVNYGFPHYILDI 78
>gi|308185086|ref|YP_003929219.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori SJM180]
gi|308061006|gb|ADO02902.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori SJM180]
Length = 342
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG 134
I G
Sbjct: 110 CEKIATG 116
>gi|261840049|gb|ACX99814.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori 52]
Length = 342
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG 134
I G
Sbjct: 110 CEKIATG 116
>gi|120556554|ref|YP_960905.1| thiamine biosynthesis protein ThiI [Marinobacter aquaeolei VT8]
gi|189030638|sp|A1U6U9|THII_MARAV RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|120326403|gb|ABM20718.1| [ThiS-adenylate] sulfurtransferase [Marinobacter aquaeolei VT8]
Length = 484
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 27/187 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ + L SGG DSS + R R L F+ G + ++
Sbjct: 179 ETVMTLISGGYDSSVAAYLMMRRGIRSHYLFFNLGG---------AAHEVGVRQVAHYLW 229
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ G H + + + V R + L AA +A
Sbjct: 230 ERYGSSHNVKFISVPFEGVVAEIMRSVNHRHWG-----VVLKR--MMLKAAAEIARDYNA 282
Query: 129 TNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +V+G S + + + S V PL+ + K E ++A+DI
Sbjct: 283 SGLVMGDAVAQVSS----------QTLTNLNVVDRASDEVVLRPLIAMDKQEIIRIAKDI 332
Query: 188 GGQDLVN 194
G +
Sbjct: 333 GTEPFAR 339
>gi|125973240|ref|YP_001037150.1| tRNA-specific 2-thiouridylase MnmA [Clostridium thermocellum ATCC
27405]
gi|256003718|ref|ZP_05428706.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium thermocellum DSM 2360]
gi|281417440|ref|ZP_06248460.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium thermocellum JW20]
gi|205813738|sp|A3DDC8|MNMA_CLOTH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|125713465|gb|ABN51957.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium thermocellum ATCC 27405]
gi|255992279|gb|EEU02373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium thermocellum DSM 2360]
gi|281408842|gb|EFB39100.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium thermocellum JW20]
gi|316940529|gb|ADU74563.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium thermocellum DSM 1313]
Length = 359
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 62/199 (31%), Gaps = 27/199 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELM 64
++ SGG DSS + L++ V + E L C V+
Sbjct: 2 SKKKVMVGMSGGVDSSVAAAILLEQGYEVIGATMQIWPDTDEETKLVEGGCCSLSAVDDA 61
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ LG + + DI S+ + PN P R + F
Sbjct: 62 RSVANKLGIPYYV--LNFKDIFEKSVINYFKDEYLKGRTPN---PCIACNRFVKFESM-L 115
Query: 121 TLAYRLGITNIVIGVCETDYSG--YPDCRHDTI--------RAIETAINLGMESHVT-VH 169
A +GI I G Y+ Y D + + + A+ + + +
Sbjct: 116 NKALSMGIDYIATG----HYAIITYDDNKKRYLLKKSVTQQKDQTYALYNVTQEQLKHIL 171
Query: 170 TPLMWLKKYETWKLAQDIG 188
P+ K + A+++G
Sbjct: 172 MPIGNFTKEQVRAKAKELG 190
>gi|315635922|ref|ZP_07891184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arcobacter butzleri JV22]
gi|315479901|gb|EFU70572.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arcobacter butzleri JV22]
Length = 367
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 63/202 (31%), Gaps = 42/202 (20%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQR-----NKVELECRLCV 56
+ K ++ SGG DSS + V L YG + N++E E V
Sbjct: 1 MNKNKKIVVGMSGGVDSSVTALLLKQQGYDVVGLFMRNWEYGIKGSQCPNRIEFEDAKKV 60
Query: 57 RKKI-VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
I +E+ K D + + + G + ++ + N +F
Sbjct: 61 GALIGIEVRGKDFVKEYRDRVFDVFLEGLKQGLTPNPDILCNKEIKF---------N-VF 110
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGY--------P-DCRHD---TIRAIETAINLGME 163
L A +G I G + Y P D D + A+ E
Sbjct: 111 LN----EAKSMGADMIATG-HYAKIAKYKDHFVLDTPKDNTKDQSYFLHAL------SSE 159
Query: 164 SHVTVHTPLMWLKKYETWKLAQ 185
PL L K E ++A+
Sbjct: 160 QLSHAMFPLGDLTKKEVREIAR 181
>gi|261367756|ref|ZP_05980639.1| thiamine biosynthesis/tRNA modification protein ThiI
[Subdoligranulum variabile DSM 15176]
gi|282570553|gb|EFB76088.1| thiamine biosynthesis/tRNA modification protein ThiI
[Subdoligranulum variabile DSM 15176]
Length = 397
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 29/193 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL L SGG DS R + + F L + K+ +L + +
Sbjct: 180 RALNLLSGGIDSPVAAWCMARRGLALHHIHF------ASPPYTSLRAKLKVQKLAKELVE 233
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYRLG 127
G + + + ++ P+ V R L A +A L
Sbjct: 234 YTGNCTLFVVPYTK-----------PQEYIRDHAPDVLFTVLMRRS-MLRIANQVAKNLE 281
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ ++ G + + + + + V P + + K E L++ I
Sbjct: 282 LQALITGESLAQVAS---------QTMAALVCTDEAQDLPVLRPCIGMDKTEIIALSRKI 332
Query: 188 GGQDLVNLILEES 200
G D E+
Sbjct: 333 GTFDTSIEPYEDC 345
>gi|157736746|ref|YP_001489429.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arcobacter butzleri RM4018]
gi|205810440|sp|A8ES36|MNMA2_ARCB4 RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|157698600|gb|ABV66760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arcobacter butzleri RM4018]
Length = 367
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 63/202 (31%), Gaps = 42/202 (20%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQR-----NKVELECRLCV 56
+ K ++ SGG DSS + V L YG + N++E E V
Sbjct: 1 MNKNKKIVVGMSGGVDSSVTALLLKQQGYDVVGLFMRNWEYGIKGSQCPNRIEFEDAKKV 60
Query: 57 RKKI-VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
I +E+ K D + + + G + ++ + N +F
Sbjct: 61 GALIGIEVRGKDFVKEYRDRVFDVFLEGLKQGLTPNPDILCNKEIKF---------N-VF 110
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGY--------P-DCRHD---TIRAIETAINLGME 163
L A +G I G + Y P D D + A+ E
Sbjct: 111 LN----EAKSMGADMIATG-HYAKIAKYKDHFVLDTPKDNTKDQSYFLHAL------SSE 159
Query: 164 SHVTVHTPLMWLKKYETWKLAQ 185
PL L K E ++A+
Sbjct: 160 QLSHAMFPLGDLTKKEVREIAR 181
>gi|217032089|ref|ZP_03437589.1| hypothetical protein HPB128_16g49 [Helicobacter pylori B128]
gi|216946237|gb|EEC24845.1| hypothetical protein HPB128_16g49 [Helicobacter pylori B128]
Length = 342
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + +++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKNAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALQLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|20808819|ref|NP_623990.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Thermoanaerobacter tengcongensis MB4]
gi|24638308|sp|Q8R7F0|MNMA2_THETN RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|20517470|gb|AAM25594.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Thermoanaerobacter tengcongensis MB4]
Length = 364
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++K ++ SGG DSS ++ V ++
Sbjct: 1 MQKNNRVVVGMSGGVDSSVAAYLLKEQGYEVIGVT 35
>gi|307720640|ref|YP_003891780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfurimonas autotrophica DSM 16294]
gi|306978733|gb|ADN08768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfurimonas autotrophica DSM 16294]
Length = 341
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 67/212 (31%), Gaps = 39/212 (18%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELM 64
L+ SGG DS+ ++ VE L Y + + E +K + +
Sbjct: 1 MKEKVLVGMSGGVDSTITSLLLKEQGYEVEGL---YMKLHSKPGYHEIHQARAQKAADFV 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ H+L L + + + + + PN P RN+ F
Sbjct: 58 GI------KLHVLDL---QETFNEKVFQPFIDTYAEGKTPN---PCALCNRNLKFGEM-I 104
Query: 121 TLAYRLGITNIVIG-VCETDYSGYPDCRHDTIRAIET--------AINLGMESHVTVHTP 171
A +G + G +TD + + A + + E + P
Sbjct: 105 KFADEIGAQYLATGHYIKTDG--------EYLYAADDDTKDQSYFLFYINREILPRLKFP 156
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTC 203
L K + +LA I G + + E S C
Sbjct: 157 LGERHKKDIKELAASIKGLESFSSQAESSEIC 188
>gi|254304215|ref|ZP_04971573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148324407|gb|EDK89657.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 337
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
M D ++K AL LFSGG DS+ + ++ V L+F
Sbjct: 1 MKDSMEKI-KALALFSGGLDSALAIKVVQEQGIEVIALNF 39
>gi|310816020|ref|YP_003963984.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ketogulonicigenium vulgare Y25]
gi|308754755|gb|ADO42684.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ketogulonicigenium vulgare Y25]
Length = 379
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 9/102 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + + C + I + +
Sbjct: 20 RVVVAMSGGVDSSVVAAQLKREGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
+ ++L ++ + V + D+ L T VP
Sbjct: 80 EMGFPHYVLDY-------ENTFREAVIDEFADSYLAGATPVP 114
>gi|237740278|ref|ZP_04570759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 2_1_31]
gi|229422295|gb|EEO37342.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 2_1_31]
Length = 334
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+K+ AL LFSGG DS+ + D+ V L+F
Sbjct: 1 MKEKIKALALFSGGLDSALAIKLVQDQGVEVIALNF 36
>gi|149372147|ref|ZP_01891417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[unidentified eubacterium SCB49]
gi|149354914|gb|EDM43476.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[unidentified eubacterium SCB49]
Length = 418
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V L
Sbjct: 17 VTMKKKRVVVGLSGGVDSSVTAYLLKEQGYEVIGL 51
>gi|71083529|ref|YP_266248.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Pelagibacter ubique HTCC1062]
gi|91762051|ref|ZP_01264016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Pelagibacter ubique HTCC1002]
gi|123646720|sp|Q4FME4|MNMA_PELUB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|71062642|gb|AAZ21645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Pelagibacter ubique HTCC1062]
gi|91717853|gb|EAS84503.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Pelagibacter ubique HTCC1002]
Length = 371
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 4 IIKKAPSALLLF--SGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKI 60
I K L++ SGG DSST + + V ++ Y + + C + I
Sbjct: 9 IAKDPKDTLVIVAMSGGVDSSTVAAMMKNEGYNVIGITLKLYNDSKETASSKQCCAGQDI 68
Query: 61 VELMPKWKDSLGEDHIL 77
++ E IL
Sbjct: 69 MDAKRVADKLKIEHKIL 85
>gi|254437717|ref|ZP_05051211.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Octadecabacter antarcticus 307]
gi|198253163|gb|EDY77477.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Octadecabacter antarcticus 307]
Length = 379
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 9/105 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + + V ++ Y + + C + I +
Sbjct: 17 SQTRVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARR 76
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
+D ++L ++ + V + D+ L T VP
Sbjct: 77 VAEDMGFPHYVLDY-------ENTFREAVIDEFADSYLAGATPVP 114
>gi|148642202|ref|YP_001272715.1| ATPase [Methanobrevibacter smithii ATCC 35061]
gi|222444620|ref|ZP_03607135.1| hypothetical protein METSMIALI_00232 [Methanobrevibacter smithii
DSM 2375]
gi|148551219|gb|ABQ86347.1| predicted ATPase (PP-loop superfamily) [Methanobrevibacter smithii
ATCC 35061]
gi|222434185|gb|EEE41350.1| hypothetical protein METSMIALI_00232 [Methanobrevibacter smithii
DSM 2375]
Length = 226
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 48/194 (24%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+LFSGG+DS+ L AL+ + V LS ++ D L
Sbjct: 5 VLFSGGKDSTMALYNALETGEDVKYLLS----------MKSVNDESYMFHVPNIHITDLL 54
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
E +P+ ++ T+ + + ++ L A LG+ I
Sbjct: 55 AEALNIPII-------TAQTQGIKEEELED--------------LKMAFIKLKDLGVEAI 93
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----YETWKLAQDI 187
G YS Y R + LG E + + +P + + E L ++
Sbjct: 94 YTGAL---YSVYQKSRIE---------KLGDEVGLEIISPYWHVDELEYMKEIVSLGFEV 141
Query: 188 GGQDLVNLILEESH 201
+ L+ES
Sbjct: 142 IISGVFAYGLDESW 155
>gi|261350840|ref|ZP_05976257.1| N-type ATP pyrophosphatase family protein [Methanobrevibacter
smithii DSM 2374]
gi|288860458|gb|EFC92756.1| N-type ATP pyrophosphatase family protein [Methanobrevibacter
smithii DSM 2374]
Length = 226
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 48/194 (24%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+LFSGG+DS+ L AL+ + V LS ++ D L
Sbjct: 5 VLFSGGKDSTMALYNALETGEDVKYLLS----------MKSVNDESYMFHVPNIHITDLL 54
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
E +P+ ++ T+ + + ++ L A LG+ I
Sbjct: 55 AEALNIPII-------TAQTQGIKEEELED--------------LKMAFIKLKDLGVEAI 93
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----YETWKLAQDI 187
G YS Y R + LG E + + +P + + E L ++
Sbjct: 94 YTGAL---YSVYQKSRIE---------KLGDEVGLEIISPYWHVNELEYMKEIVSLGFEV 141
Query: 188 GGQDLVNLILEESH 201
+ L+ES
Sbjct: 142 IISGVFAYGLDESW 155
>gi|149175981|ref|ZP_01854598.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Planctomyces maris DSM 8797]
gi|148845135|gb|EDL59481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Planctomyces maris DSM 8797]
Length = 369
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 63/204 (30%), Gaps = 25/204 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-----------C 55
+ +L SGG DSS L++ V L G E C +
Sbjct: 1 MSQRVVLAMSGGVDSSAAAHLLLEQGYEVIGLFMRSG--ATEETACAIEDKNSLPVLNLK 58
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRN 112
K+ D+ +L + + A + PN V N
Sbjct: 59 AHKQGCCSASDAADARRVADMLDIPFHALNFKDAFGRIKDYFADEYLAGRTPNPCVMCNN 118
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPD-CRHDTIRAIETA-----INLGMESHV 166
+ A ++G + I G + PD + IR ++ + + G+ +
Sbjct: 119 WLKFGKLWEFAEQVGASYISTG-HYAQLTSLPDETQPALIRGLDRSKDQSYVLFGINRGL 177
Query: 167 --TVHTPLMWLKKYETWKLAQDIG 188
+ P+ K E ++A + G
Sbjct: 178 LDKIIFPVGGFVKPEIREMAGEAG 201
>gi|126729666|ref|ZP_01745479.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sagittula stellata E-37]
gi|126709785|gb|EBA08838.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sagittula stellata E-37]
Length = 379
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 7/104 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + + V ++ Y + + C I +
Sbjct: 17 SETRVVVAMSGGVDSSVVAAMLKEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 76
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+D ++L +I ++ + A P VP
Sbjct: 77 VAEDMGFPHYVLD---YENIFQEAVIEEFADSYLGGATP---VP 114
>gi|294507733|ref|YP_003571791.1| cell cycle protein MesJ [Salinibacter ruber M8]
gi|294344061|emb|CBH24839.1| cell cycle protein MesJ [Salinibacter ruber M8]
Length = 468
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
L+ SGG DS TCLS V L +YG R + + L R
Sbjct: 25 LVAASGGVDSMTCLSVLRRLDADVHALHVNYGLRAGADGDEALVRR 70
>gi|260914106|ref|ZP_05920579.1| thiamine biosynthesis protein ThiI [Pasteurella dagmatis ATCC
43325]
gi|260631739|gb|EEX49917.1| thiamine biosynthesis protein ThiI [Pasteurella dagmatis ATCC
43325]
Length = 480
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 62/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSESHKVRFVAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASRIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI IV G S + + + S+ V PL+ K + +
Sbjct: 277 ERFGIQAIVTGEALGQVSS---------QTLTNLRLIDEASNCLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|251778897|ref|ZP_04821817.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|243083212|gb|EES49102.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 385
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +L+ SGG DS R + + Y + E K + +++
Sbjct: 174 MNGSTMLMLSGGIDSPVAGYLMAKRGVELNCV---YYHSHPYTSERAKDKVKDLAKILAS 230
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I I + + ++ + A +A
Sbjct: 231 YTEKINLYVVPFTEIQMAILDKCREDELTIIMRR-------------FMMRVACKIAEEK 277
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI ++ G + + +E I + V PL+ + K + +A+
Sbjct: 278 GIQSVTSGESIGQVAS---------QTMEGLIVSNDCADRPVFRPLIAMDKTDIMDIARK 328
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 329 IETYETSILPYEDC 342
>gi|188590501|ref|YP_001922014.1| thiamine biosynthesis protein ThiI [Clostridium botulinum E3 str.
Alaska E43]
gi|238691977|sp|B2UX29|THII_CLOBA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|188500782|gb|ACD53918.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
botulinum E3 str. Alaska E43]
Length = 385
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 25/194 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S +L+ SGG DS R + + Y + E K + +++
Sbjct: 174 MNGSTMLMLSGGIDSPVAGYLMAKRGVELNCV---YYHSHPYTSERAKDKVKDLAKILAS 230
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + + I I + + ++ + A +A
Sbjct: 231 YTEKINLYVVPFTEIQMAILDKCREDELTIIMRR-------------FMMRVACKIAEEK 277
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
GI ++ G + + +E I + V PL+ + K + +A+
Sbjct: 278 GIQSVTSGESIGQVAS---------QTMEGLIVSNDCADRPVFRPLIAMDKTDIMDIARK 328
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 329 IETYETSILPYEDC 342
>gi|163783771|ref|ZP_02178756.1| hypothetical protein HG1285_09931 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880960|gb|EDP74479.1| hypothetical protein HG1285_09931 [Hydrogenivirga sp. 128-5-R1-1]
Length = 348
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L SGG DSS + ++ V+ L F Y E + RL + KK
Sbjct: 5 RAVALLSGGLDSSLAVRILQEQGVEVKALHF-YTGFCITEHKRRLGLTKKDGRQYVNPAL 63
Query: 70 SLGEDHILPLAIL 82
+PL I+
Sbjct: 64 KAAAQLGVPLDIV 76
>gi|91787812|ref|YP_548764.1| hypothetical protein Bpro_1935 [Polaromonas sp. JS666]
gi|91697037|gb|ABE43866.1| conserved hypothetical protein [Polaromonas sp. JS666]
Length = 466
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 26/96 (27%), Gaps = 3/96 (3%)
Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197
D + + C + +N V P ++ K + L
Sbjct: 260 GDEAPHRSCHPGFTSRLTRLVNALTNVTVRFEHPALFQTKGQVLAQLASQKSASEAWLAG 319
Query: 198 EESHTC-YLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
+C Y + + + C C C LR+
Sbjct: 320 HR--SCSYDARHSSQDKRSMHCGVCGNCLLRRVALK 353
>gi|169350064|ref|ZP_02867002.1| hypothetical protein CLOSPI_00804 [Clostridium spiroforme DSM
1552]
gi|169293277|gb|EDS75410.1| hypothetical protein CLOSPI_00804 [Clostridium spiroforme DSM
1552]
Length = 387
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+++ + + +L SGG DS+ + V +
Sbjct: 6 SEVTRMSKRVVLGLSGGVDSAVAAYLLKKQGYEVIGV 42
>gi|298735640|ref|YP_003728165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori B8]
gi|298354829|emb|CBI65701.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori B8]
Length = 360
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 23 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 76
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + +++ ++ PN P N + A A +LG
Sbjct: 77 ------LEVLDFQKDFKNAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALQLG 127
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 128 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 177
Query: 173 MWLKKYET 180
L K +
Sbjct: 178 GDLLKKDI 185
>gi|161353438|ref|NP_208127.2| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori 26695]
gi|205371769|sp|O25893|MNMA_HELPY RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 342
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFINAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG 134
I G
Sbjct: 110 CEKIATG 116
>gi|72053243|ref|XP_783757.1| PREDICTED: similar to GMPS protein [Strongylocentrotus purpuratus]
gi|115924043|ref|XP_001183900.1| PREDICTED: similar to GMPS protein [Strongylocentrotus purpuratus]
Length = 684
Score = 45.6 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG--QRNKVEL 50
L+L SGG DS+ C + R D+V L D G +RN+ +L
Sbjct: 226 NNKVLVLVSGGVDSTVCAALLRKALRADQVVALHIDNGFMRRNESQL 272
>gi|330445281|ref|ZP_08308933.1| thiamine biosynthesis/tRNA modification protein ThiI
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489472|dbj|GAA03430.1| thiamine biosynthesis/tRNA modification protein ThiI
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 483
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVKFIAIDFEPVVG------EILEKVDDGQMG--VILKR--MFMRAAGKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + L
Sbjct: 277 DKFGIEALVTGEALGQVSS---------QTLTNLRHIDGVTDSLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|225174584|ref|ZP_03728582.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dethiobacter alkaliphilus AHT 1]
gi|225169711|gb|EEG78507.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dethiobacter alkaliphilus AHT 1]
Length = 366
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+KK L+ SGG DSS C + ++ ++
Sbjct: 1 MKKNNRVLVAMSGGVDSSLCAALLKEQGYEAIGVTMR 37
>gi|149911105|ref|ZP_01899732.1| thiamine biosynthesis protein ThiI [Moritella sp. PE36]
gi|149805855|gb|EDM65844.1| thiamine biosynthesis protein ThiI [Moritella sp. PE36]
Length = 484
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 63/197 (31%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS+ + R R F+ G + K+I
Sbjct: 175 PMAGQEDVLSLMSGGFDSAVSSYLTIKRGSRTHFCFFNLGG------DAHEIGVKQISYF 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +++ D + + + V V R + + A+ +A
Sbjct: 229 L--WNKYSSSHKVKFVSVPFDPVVAEILEKVDNSQMG------VVLKR--MMMRAASKVA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
RLGI +V G S + I + + + PL+ K +
Sbjct: 279 ERLGIEALVTGEAVGQVSS---------QTIRNLSLIDSVTDTLILRPLIVADKQDIIDT 329
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + I E
Sbjct: 330 ARKIGTAEFSETIPEYC 346
>gi|95930240|ref|ZP_01312978.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfuromonas acetoxidans DSM 684]
gi|95133703|gb|EAT15364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfuromonas acetoxidans DSM 684]
Length = 346
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 45/133 (33%), Gaps = 21/133 (15%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRKKIVEL 63
K + L+ SGG DSS + +D+ V Q + E + R +I E
Sbjct: 2 KKNTVLVAMSGGVDSSVTAALLIDQGYEVIGAHMRLLPGDQSIQGEADAR-----RIAEE 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-NIIF-LVFAAT 121
+ SL AI+GD + + PN V R N F
Sbjct: 57 LEIPFHSLDCRDTFNAAIIGDFCR---------EYRAGRTPNPCV--RCNQQFKFGALFA 105
Query: 122 LAYRLGITNIVIG 134
LA LG + G
Sbjct: 106 LADELGADYLATG 118
>gi|311746884|ref|ZP_07720669.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Algoriphagus sp. PR1]
gi|126578570|gb|EAZ82734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Algoriphagus sp. PR1]
Length = 403
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+K P ++ SGG DSS L++ V +
Sbjct: 1 MKTKPRVVVGLSGGVDSSVAAHLLLEQGYEVIGM 34
>gi|58698498|ref|ZP_00373403.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Wolbachia endosymbiont of Drosophila ananassae]
gi|225630917|ref|YP_002727708.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Wolbachia sp. wRi]
gi|254811470|sp|C0R4S5|MNMA_WOLWR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|58534992|gb|EAL59086.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Wolbachia endosymbiont of Drosophila ananassae]
gi|225592898|gb|ACN95917.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Wolbachia sp. wRi]
Length = 370
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSS + + +V ++ YG C + + +
Sbjct: 20 KAIVAMSGGVDSSVAAALLHNLGYQVIGVTLQLYGTDGNANARKGACCAGQDIYDAKRVA 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
+S+G H + +I + ++ A P N V R+++ +
Sbjct: 80 ESVGFPHYI--LNYEEIFKKEVIEDFASTYMRGETPIPCVRCNQTVKFRDLLQVT----- 132
Query: 123 AYRLGITNIVIG 134
LG +V G
Sbjct: 133 -KNLGADVLVTG 143
>gi|315180894|gb|ADT87808.1| thiamine biosynthesis protein ThiI [Vibrio furnissii NCTC 11218]
Length = 482
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWHKYGSSAKVRFISVDFAPVVA------EILEKVDDGQMG--VILKR--MFMRAAGQVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKDDIINV 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|260767263|ref|ZP_05876204.1| thiamine biosynthesis protein ThiI [Vibrio furnissii CIP 102972]
gi|260617771|gb|EEX42949.1| thiamine biosynthesis protein ThiI [Vibrio furnissii CIP 102972]
Length = 482
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWHKYGSSAKVRFISVDFAPVVA------EILEKVDDGQMG--VILKR--MFMRAAGQVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKDDIINV 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|219851201|ref|YP_002465633.1| hypothetical protein Mpal_0537 [Methanosphaerula palustris E1-9c]
gi|219545460|gb|ACL15910.1| PP-loop domain-containing protein [Methanosphaerula palustris
E1-9c]
Length = 194
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A +LFSGG+DS+ + L R +VE +F + Q + + + + +
Sbjct: 2 KAAVLFSGGKDSA-LAALMLARDYQVELNTFVFDQHHSLPAVEAAADALSLPLIRRTFGT 60
Query: 70 SLGEDHILPLAILG 83
+L + ++ + G
Sbjct: 61 ALRDRLVVMIRQCG 74
>gi|210135491|ref|YP_002301930.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori P12]
gi|210133459|gb|ACJ08450.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methylt ransferase
[Helicobacter pylori P12]
Length = 362
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 25 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 78
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 79 ------LEVLDFQKDFKSAVYDEFINAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 129
Query: 128 ITNIVIG 134
I G
Sbjct: 130 CEKIATG 136
>gi|317013122|gb|ADU83730.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori
Lithuania75]
Length = 342
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDEFINAYEEGKTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG 134
I G
Sbjct: 110 CEKIATG 116
>gi|2314503|gb|AAD08378.1| conserved hypothetical protein [Helicobacter pylori 26695]
Length = 360
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 23 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 76
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 77 ------LEVLDFQKDFKSAVYDEFINAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 127
Query: 128 ITNIVIG 134
I G
Sbjct: 128 CEKIATG 134
>gi|329113810|ref|ZP_08242581.1| tRNA-specific 2-thiouridylase MnmA [Acetobacter pomorum DM001]
gi|326696820|gb|EGE48490.1| tRNA-specific 2-thiouridylase MnmA [Acetobacter pomorum DM001]
Length = 360
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 5/126 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
L+ SGG DSS + L+ V + Y R + + C + I +
Sbjct: 2 RILVAMSGGVDSSVVAARLLEEGHEVVGATLQLYDSRGAAK-KGACCAGQDIRDARAVAD 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+++ S+ + A P V + LA +G
Sbjct: 61 LLGFPHYVID---AERRFKDSVIERFADAYASGETPVPCVACNQGVKFTDLLGLAREIGA 117
Query: 129 TNIVIG 134
+ G
Sbjct: 118 DAMATG 123
>gi|312891399|ref|ZP_07750916.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mucilaginibacter paludis DSM 18603]
gi|311296093|gb|EFQ73245.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mucilaginibacter paludis DSM 18603]
Length = 362
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V L+ DY E C I
Sbjct: 1 MSKHGRILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYASSGTNTKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPL 79
+ +IL +
Sbjct: 61 DARALAVGYGFPHYILDI 78
>gi|242309258|ref|ZP_04808413.1| tRNA methyltransferase [Helicobacter pullorum MIT 98-5489]
gi|239524299|gb|EEQ64165.1| tRNA methyltransferase [Helicobacter pullorum MIT 98-5489]
Length = 325
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-------QRNKVELECRLCVRKKIVE 62
AL LFSGG DS + D V L F+ G E+ ++ V K+++
Sbjct: 2 KALALFSGGLDSLLAIKIIKDMGIDVLALHFNIGFVGKNDKSEALKEILAQIDVPLKVID 61
Query: 63 LMPKWKDSL 71
+ ++ D +
Sbjct: 62 IRKQFFDEV 70
>gi|218663598|ref|ZP_03519528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhizobium etli IE4771]
Length = 345
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130
Query: 129 TNIVIGVCETDYSGYPDCRHDT--IRAIETAINLGMESHVTVHT-----------PLMWL 175
+ G P + RA+ + + + PL L
Sbjct: 131 DALATG-HYIRSRPNP--SPEHPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGL 187
Query: 176 KKYETWKLAQDIG 188
K ET +LA+++G
Sbjct: 188 PKAETRRLAEEMG 200
>gi|190893264|ref|YP_001979806.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Rhizobium etli CIAT 652]
gi|229486418|sp|B3PYW4|MNMA_RHIE6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|190698543|gb|ACE92628.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
[Rhizobium etli CIAT 652]
Length = 408
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 23 RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 82
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 83 TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 139
Query: 129 TNIVIGVCETDYSGYPDCRHDT--IRAIETAINLGMESHVTVHT-----------PLMWL 175
+ G P + RA+ + + + PL L
Sbjct: 140 DALATG-HYIRSRPNP--SPEHPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGL 196
Query: 176 KKYETWKLAQDIG 188
K ET +LA+++G
Sbjct: 197 PKAETRRLAEEMG 209
>gi|11498169|ref|NP_069395.1| hypothetical protein AF0559 [Archaeoglobus fulgidus DSM 4304]
gi|2650065|gb|AAB90680.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 265
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 34/188 (18%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M ++ ++ FSGG DSST + D V ++ + E++ + +I
Sbjct: 12 MRGFLEGFKGVVIAFSGGVDSSTLAAVCKDAGLDVLAVTVVSQKSPSREIKDAAKIAMEI 71
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + + IL + ++ + L
Sbjct: 72 G----------VKHEFVNMDILTPEFRENTSERCYFCKKKV--------------LSSLV 107
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+LA G + G +D G+ R +A++ G+ S + K E
Sbjct: 108 SLAEERGYDAVFEGTNASDLEGH---RPGY-KAVKEM--HGVYSPWA----EFGITKKEI 157
Query: 181 WKLAQDIG 188
+A+ +G
Sbjct: 158 RMVAKSMG 165
>gi|254451424|ref|ZP_05064861.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Octadecabacter antarcticus 238]
gi|198265830|gb|EDY90100.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Octadecabacter antarcticus 238]
Length = 379
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 9/105 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + + V ++ Y + + C + I +
Sbjct: 17 SQTRVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARR 76
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
+D ++L ++ + V + D+ L T VP
Sbjct: 77 VAEDMGFPHYVLDY-------ENTFREAVIDEFADSYLAGATPVP 114
>gi|16759402|ref|NP_455019.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142826|ref|NP_806168.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213052897|ref|ZP_03345775.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213427860|ref|ZP_03360610.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213585097|ref|ZP_03366923.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213647261|ref|ZP_03377314.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213855373|ref|ZP_03383613.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289825068|ref|ZP_06544420.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|20140619|sp|Q8Z8X1|THII_SALTI RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|25513295|pir||AI0554 thiamin biosynthesis protein ThiI [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16501693|emb|CAD08881.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138458|gb|AAO70028.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 482
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DSS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSSVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|330838778|ref|YP_004413358.1| tRNA-specific 2-thiouridylase mnmA [Selenomonas sputigena ATCC
35185]
gi|329746542|gb|AEB99898.1| tRNA-specific 2-thiouridylase mnmA [Selenomonas sputigena ATCC
35185]
Length = 352
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 17/133 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELM 64
+ SGG DSS C + ++ V ++ R + +++ +
Sbjct: 1 MKKKVAVAMSGGVDSSLCAALLQEQGYEVLGITMQLSDDSREMNGVSSAATDARRVADF- 59
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFA--AT 121
LG +H++ A + + + PN + R FL F +
Sbjct: 60 ------LGIEHVV--ADFRTLFSDKVVDYFLTEYLTARTPNPCVICNR---FLKFGELLS 108
Query: 122 LAYRLGITNIVIG 134
A G + G
Sbjct: 109 FAKEKGADFLATG 121
>gi|124003360|ref|ZP_01688210.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Microscilla marina ATCC 23134]
gi|123991458|gb|EAY30889.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Microscilla marina ATCC 23134]
Length = 386
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 41/134 (30%), Gaps = 8/134 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V ++ DY + E C I
Sbjct: 1 MSKKGRVLVAMSGGIDSSLAAVLLHEQGYEVVGITMKTWDYASSGGSKKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPLAI-LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ D IL + GD T + D PN V I
Sbjct: 61 DARNIAVDLGFPHLILDIRNEFGDYVIDHFTN----EYLDGRTPNPCVLCNTHIKWDALL 116
Query: 121 TLAYRLGITNIVIG 134
A +L +I G
Sbjct: 117 RRADKLDCEHIATG 130
>gi|99035878|ref|ZP_01314930.1| hypothetical protein Wendoof_01000225 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 370
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSS + + +V ++ YG C + + +
Sbjct: 20 KAVVAMSGGVDSSVAAALLHNLGYKVVGMTLQLYGTDGNANARKGACCAGQDIYDAKRVA 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
+S+G H + +I + ++ A P N V R+++ +
Sbjct: 80 ESVGFPHYI--LNYEEIFKKEVIEDFASTYMRGETPIPCVRCNQTVKFRDLLQVT----- 132
Query: 123 AYRLGITNIVIG 134
LG +V G
Sbjct: 133 -KNLGADVLVTG 143
>gi|205814682|sp|Q11UP4|MNMA_CYTH3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 368
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V ++ DY + E C I
Sbjct: 1 MSKKGRVLVAMSGGIDSSVAAVMLHEQGYEVIGMTMKTWDYANLGGSKKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPL 79
+ +I+ +
Sbjct: 61 DARNIAVSLGFPHYIVDI 78
>gi|68474508|ref|XP_718627.1| hypothetical protein CaO19.7469 [Candida albicans SC5314]
gi|46440405|gb|EAK99711.1| hypothetical protein CaO19.7469 [Candida albicans SC5314]
Length = 493
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 2 NDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
N + K + L +SGG D+S L+W L++ V + GQ E + +
Sbjct: 75 NRNMSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQEEDFEEAEKKALA 129
>gi|240850925|ref|YP_002972325.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella grahamii as4aup]
gi|240268048|gb|ACS51636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella grahamii as4aup]
Length = 409
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 50/192 (26%), Gaps = 23/192 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y C + I + +
Sbjct: 16 RIVVAMSGGVDSSVVAGLLKKEGYNVIGITLQLYDHGAATHRVGACCAGQDIEDARRVAE 75
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRN-IIFLVFAATLAYR 125
++L ++ A P VP N + A
Sbjct: 76 TLGIPHYVLD---YEKRFREAVIDPFAESYAHGETP---VPCIACNQTVKFADLLATARE 129
Query: 126 LGITNIVIGV------CETDYSGY-P-DC-RHDTIRAIETAINLGMESHVTVHTPLMWLK 176
LG + G + + P D R + T PL L
Sbjct: 130 LGADALATGHYIRSRSHGAHRALFRPLDNDRDQSYFLFATTQEQIDYLRF----PLGDLP 185
Query: 177 KYETWKLAQDIG 188
K ++A ++G
Sbjct: 186 KARVREMAAEMG 197
>gi|32475293|ref|NP_868287.1| argininosuccinate synthase [Rhodopirellula baltica SH 1]
gi|32445834|emb|CAD78565.1| argininosuccinate synthase [Rhodopirellula baltica SH 1]
Length = 444
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRK 58
+ S +L +SGG D+S L W D+ V + D GQ R+ + + R C K
Sbjct: 39 SEMKSCVLAYSGGLDTSVILGWLQDQGYEVHCVYVDLGQPCEDRDAIMEKARTCGAK 95
>gi|157828286|ref|YP_001494528.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia rickettsii str.
'Sheila Smith']
gi|166235079|sp|A8GRJ5|MNMA_RICRS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205822057|sp|B0BWZ7|MNMA_RICRO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|157800767|gb|ABV76020.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia rickettsii str. 'Sheila Smith']
Length = 365
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 1 MINLGAKQSTIVVAMSGGVDSSAVAAMLNEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 61 IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 117
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + G +G D + ++ A + + +
Sbjct: 118 I------KTARELGADKLATGHYVRKING--DNGAELHTGLDPAKDQSYFLFTTTKEQLE 169
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL L K ET KLA G
Sbjct: 170 YLRFPLGGLTKGETRKLASKFG 191
>gi|91205346|ref|YP_537701.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia bellii RML369-C]
gi|157826947|ref|YP_001496011.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia bellii OSU 85-389]
gi|122425762|sp|Q1RJ52|MNMA_RICBR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|166235077|sp|A8GVU7|MNMA_RICB8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|91068890|gb|ABE04612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia bellii RML369-C]
gi|157802251|gb|ABV78974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia bellii OSU 85-389]
Length = 367
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 62/202 (30%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M + + + ++ SGG DSS ++ V ++ Y + C +
Sbjct: 1 MINSNDRQSTLVVAMSGGVDSSVVAGILCEQGYNVIGITLQLYDHGMATAKKNACCAGQD 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 61 IYDAKMVANKLGMPHYVLD---YESKFKESVIDNFVDSYLRGETPLPCVQCNKSVKFRDL 117
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVT 167
I A LG +V G +G D + ++ + + +
Sbjct: 118 I------KTAKELGADKLVTGHYVRKING--DNGPELHMGLDPLKDQSYFLFATTKEQLE 169
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL L K ET KLA G
Sbjct: 170 YLDFPLGALTKDETRKLASKFG 191
>gi|165932990|ref|YP_001649779.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia rickettsii str.
Iowa]
gi|165908077|gb|ABY72373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia rickettsii str. Iowa]
Length = 370
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 6 MINLGAKQSTIVVAMSGGVDSSAVAAMLNEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 65
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 66 IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 122
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + G +G D + ++ A + + +
Sbjct: 123 I------KTARELGADKLATGHYVRKING--DNGAELHTGLDPAKDQSYFLFTTTKEQLE 174
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL L K ET KLA G
Sbjct: 175 YLRFPLGGLTKGETRKLASKFG 196
>gi|304394517|ref|ZP_07376438.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ahrensia sp. R2A130]
gi|303293427|gb|EFL87806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ahrensia sp. R2A130]
Length = 406
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 4/126 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ Y V+ + C + I + +
Sbjct: 16 RVVVAMSGGVDSSVVACLLKEQGYEVLGMTLQLYDHGAAVQKKGACCAGQDIHDARRVSE 75
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L + A + P V + T A LG
Sbjct: 76 QMGFPHYVLD---YEQKFREQVIDPFAKAYINGETPIPCVACNQTVKFSDLLTTARELGA 132
Query: 129 TNIVIG 134
+ G
Sbjct: 133 DCLATG 138
>gi|218296057|ref|ZP_03496826.1| NAD+ synthetase [Thermus aquaticus Y51MC23]
gi|218243434|gb|EED09963.1| NAD+ synthetase [Thermus aquaticus Y51MC23]
Length = 281
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 38/188 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++ SGG DS+T L+ A+ DRV L R+ L + E
Sbjct: 38 EKAIVAVSGGVDSATTLALAVRALGQDRVHALFL--PHRDSSPLSREH--AYLVAETFGV 93
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-AYR 125
+ + ++ ++++LT ++ + N + T R ++ + A
Sbjct: 94 ALEEVDITPMVE-------AYAALTPDLTPHRKGNVMART----RMVVLFDKSQAYQALP 142
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG G GY G ++ PL L K + W+LA+
Sbjct: 143 LG-----TGNKTERLFGY-------------YTWHGDDTPP--VNPLGDLYKTQVWRLAE 182
Query: 186 DIGGQDLV 193
+G + V
Sbjct: 183 YLGVPEAV 190
>gi|159905824|ref|YP_001549486.1| PP-loop domain-containing protein [Methanococcus maripaludis C6]
gi|159887317|gb|ABX02254.1| PP-loop domain protein [Methanococcus maripaludis C6]
Length = 296
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIV 61
D+ K +++ SGG+DS+ L+ A D V + F +K + KK+
Sbjct: 33 DLNLKDEKIIVMLSGGKDSAVALAIAKDLGLNVHLCVHF----VHKWSWDISTNEAKKLA 88
Query: 62 ELM 64
+
Sbjct: 89 DKF 91
>gi|75676895|ref|YP_319316.1| tRNA(Ile)-lysidine synthase [Nitrobacter winogradskyi Nb-255]
gi|74421765|gb|ABA05964.1| tRNA(Ile)-lysidine synthase [Nitrobacter winogradskyi Nb-255]
Length = 371
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 63/215 (29%), Gaps = 56/215 (26%)
Query: 7 KAPSALLL-FSGGQDSSTCLSW------ALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
KA AL+L SGG DS + A+ R + ++ D + + E R+
Sbjct: 35 KASRALVLAVSGGPDSVALMWLAARWRRAMKRGPDLVAVTVD----HALRREAAREARQ- 89
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + SL H T LP R +
Sbjct: 90 ----VKQLAKSLSIPH--------------RTLRWTGPKPATGLPAAAREARYALLFKA- 130
Query: 120 ATLAYRLGITNIVIGVCETD-----------YSGYPDCRHDTIRAIETAINLGMESHVTV 168
A LG ++++ G D SG I + M +
Sbjct: 131 ---ARSLGASHVLTGHTLDDQAETVLMRISRGSG--------IAGLSAMSRETMRDGFVL 179
Query: 169 HTPLMWLKKYE---TWKLAQDIGGQDLVNLILEES 200
PL+ + K T K A+ +D N L +
Sbjct: 180 VRPLLNVPKARLIATLKKAKIDYAEDPTNRDLGFT 214
>gi|150402995|ref|YP_001330289.1| argininosuccinate synthase [Methanococcus maripaludis C7]
gi|150034025|gb|ABR66138.1| Argininosuccinate synthase [Methanococcus maripaludis C7]
Length = 397
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 34/196 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A+L +SGG D+S CL D++ +V +++ D GQ + +E +K
Sbjct: 2 QEKIAVLAYSGGLDTSCCLKLLEDKYDYKVISVAVDVGQPEEDLIEPEEKAKK------- 54
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + + + + + + + P + R +I + A LA
Sbjct: 55 ---FGVLKHYTIDAKE--EFATEYIFRAIKANALYEGYPLSTALARPLIAIKIAE-LAEE 108
Query: 126 LGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL--MWLKKYE 179
+G + I G C E+ + + + P+ + L + E
Sbjct: 109 VGASAISHG-----------CTGKGNDQF--RFESVMRAKT-PEIEIVAPIRDLNLTRTE 154
Query: 180 TWKLAQDIGGQDLVNL 195
+ A++ G VNL
Sbjct: 155 EIEYAKEKGIPVPVNL 170
>gi|78224592|ref|YP_386339.1| thiamine biosynthesis protein [Geobacter metallireducens GS-15]
gi|78195847|gb|ABB33614.1| Thiamine biosynthesis protein [Geobacter metallireducens GS-15]
Length = 334
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL L SGG DS+ + L++ VE L+F
Sbjct: 1 MKRKALALLSGGLDSTLAVKVMLEQGIEVEALNF 34
>gi|262274766|ref|ZP_06052577.1| thiamine biosynthesis protein ThiI [Grimontia hollisae CIP 101886]
gi|262221329|gb|EEY72643.1| thiamine biosynthesis protein ThiI [Grimontia hollisae CIP 101886]
Length = 482
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G ++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------AAHEIGVQQTAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + ++ + K+ D + + R +F+ A+ LA
Sbjct: 227 LWEKYGSSAKVKFVSVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAASMLA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ S + PL+ K + L
Sbjct: 277 EKFGIQALVTGEALGQVSS---------QTLTNLRHIDNVSDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|226329089|ref|ZP_03804607.1| hypothetical protein PROPEN_02992 [Proteus penneri ATCC 35198]
gi|225202275|gb|EEG84629.1| hypothetical protein PROPEN_02992 [Proteus penneri ATCC 35198]
Length = 483
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 61/192 (31%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGYDSGVSSYMLMRRGSRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + H + + ++ + K+ D + V R + + A+ +A
Sbjct: 227 LWNRFGRSHKVHFVAVDFEPVVA------EILEKVDDGQMG--VVLKR--MMVRAASRVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + + + PL+ K +
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNATDTLILRPLITHDKENIINI 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|238752776|ref|ZP_04614245.1| Thiamine biosynthesis protein thiI [Yersinia rohdei ATCC 43380]
gi|238709034|gb|EEQ01283.1| Thiamine biosynthesis protein thiI [Yersinia rohdei ATCC 43380]
Length = 483
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 329 ARQIGTEDF 337
>gi|317182580|dbj|BAJ60364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori F57]
Length = 342
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDAFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|44887702|sp|Q7UFW4|ASSY_RHOBA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|327540936|gb|EGF27494.1| argininosuccinate synthase [Rhodopirellula baltica WH47]
Length = 404
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRK 58
S +L +SGG D+S L W D+ V + D GQ R+ + + R C K
Sbjct: 2 KSCVLAYSGGLDTSVILGWLQDQGYEVHCVYVDLGQPCEDRDAIMEKARTCGAK 55
>gi|258543643|ref|YP_003189076.1| tRNA-specific 2-thiouridylase MnmA [Acetobacter pasteurianus IFO
3283-01]
gi|256634721|dbj|BAI00697.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Acetobacter pasteurianus IFO 3283-01]
gi|256637777|dbj|BAI03746.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Acetobacter pasteurianus IFO 3283-03]
gi|256640831|dbj|BAI06793.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Acetobacter pasteurianus IFO 3283-07]
gi|256643886|dbj|BAI09841.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Acetobacter pasteurianus IFO 3283-22]
gi|256646941|dbj|BAI12889.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Acetobacter pasteurianus IFO 3283-26]
gi|256649994|dbj|BAI15935.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Acetobacter pasteurianus IFO 3283-32]
gi|256652984|dbj|BAI18918.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256656038|dbj|BAI21965.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Acetobacter pasteurianus IFO 3283-12]
Length = 360
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 5/126 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
L+ SGG DSS + L+ V + Y R + + C + I +
Sbjct: 2 RILVAMSGGVDSSVVAARLLEEGHEVVGATLQLYDSRGAAK-KGACCAGQDIRDARAVAD 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+++ S+ + A P V + LA +G
Sbjct: 61 LLGFPHYVID---AERRFKDSVIERFADAYASGETPVPCVACNQGVKFTDLLGLAREIGA 117
Query: 129 TNIVIG 134
+ G
Sbjct: 118 DAMATG 123
>gi|197284009|ref|YP_002149881.1| thiamine biosynthesis protein ThiI [Proteus mirabilis HI4320]
gi|227358121|ref|ZP_03842462.1| thiamine biosynthesis protein [Proteus mirabilis ATCC 29906]
gi|238693151|sp|B4EU34|THII_PROMH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|194681496|emb|CAR40360.1| thiamine biosynthesis protein [Proteus mirabilis HI4320]
gi|227161457|gb|EEI46494.1| thiamine biosynthesis protein [Proteus mirabilis ATCC 29906]
Length = 483
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGYDSGVSSYMLMRRGSRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + H + + ++ + KI D + V R + + A+ +A
Sbjct: 227 LWNRFGRSHKVHFVAVDFEPVVA------EILEKIDDGQMG--VVLKR--MMVRAASRVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ IV G S + + + + + PL+ K +
Sbjct: 277 ERYGVQAIVTGEALGQVSS---------QTLTNLRLIDNATDTLILRPLITHDKENIINI 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|238795558|ref|ZP_04639073.1| Thiamine biosynthesis protein thiI [Yersinia mollaretii ATCC 43969]
gi|238720677|gb|EEQ12478.1| Thiamine biosynthesis protein thiI [Yersinia mollaretii ATCC 43969]
Length = 483
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 329 ARKIGTEDF 337
>gi|238783624|ref|ZP_04627645.1| Thiamine biosynthesis protein thiI [Yersinia bercovieri ATCC 43970]
gi|238715502|gb|EEQ07493.1| Thiamine biosynthesis protein thiI [Yersinia bercovieri ATCC 43970]
Length = 483
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWNRFGSSHRVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 329 ARKIGTEDF 337
>gi|103487513|ref|YP_617074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingopyxis alaskensis RB2256]
gi|123379667|sp|Q1GRI1|MNMA_SPHAL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|98977590|gb|ABF53741.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingopyxis alaskensis RB2256]
Length = 382
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 39/131 (29%), Gaps = 8/131 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
K ++ SGG DSS + A V ++ Y K + C + I +
Sbjct: 27 KDRRIVVAMSGGVDSSVVAALAARSGAEVIGVTLQLYDHGAKAKRVGACCAGQDIRDARA 86
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-NI-IFLVFAATLA 123
H+ ++ A + P V R N+ + LA
Sbjct: 87 VADRLGFVHHVHDH---ESRFRDTVIDQFADEYLAGRTPIPCV--RCNMGVKFTDLFQLA 141
Query: 124 YRLGITNIVIG 134
LG + G
Sbjct: 142 RELGADCLATG 152
>gi|327192984|gb|EGE59899.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
[Rhizobium etli CNPAF512]
Length = 399
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130
Query: 129 TNIVIGVCETDYSGYPDCRHDT--IRAIETAINLGMESHVTVHT-----------PLMWL 175
+ G P + RA+ + + + PL L
Sbjct: 131 DALATG-HYIRSRPNP--SPEHPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGL 187
Query: 176 KKYETWKLAQDIG 188
K ET +LA+++G
Sbjct: 188 PKAETRRLAEEMG 200
>gi|78357415|ref|YP_388864.1| hypothetical protein Dde_2372 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219820|gb|ABB39169.1| conserved hypothetical protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 357
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
M+D I++ AL L SGG DS + ++ RV+ L F
Sbjct: 1 MSDDIQQQYDALALLSGGLDSILAVKVVQEQGLRVKCLHF 40
>gi|317011534|gb|ADU85281.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori
SouthAfrica7]
Length = 342
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSAVYDAFIAAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG 134
I G
Sbjct: 110 CEKIATG 116
>gi|310659055|ref|YP_003936776.1| pp-loop superfamily ATP-utilizing protein [Clostridium sticklandii
DSM 519]
gi|308825833|emb|CBH21871.1| ATP-utilizing enzyme of the PP-loop superfamily (modular protein)
[Clostridium sticklandii]
Length = 428
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 43/189 (22%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
IKK ++ FSGG DSS ++ + D V ++ + E + + I
Sbjct: 177 IKKDKKVVVAFSGGVDSSLLINLCKEVLKDEVVAVTVKGPHIPESEFNEAVKLANAIG-- 234
Query: 64 MPKWKDSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K + E+ IL + + GD+ K+ K D+
Sbjct: 235 ---IKHEIVEEDILSIKEVREGDLRRCYYCKSFVFKYIDD-------------------- 271
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYE 179
A ++G + + G D S Y R ++A+E V +P + K +
Sbjct: 272 YAKKIGASAVYDGSNIDDLSDY---RPG-MQALEEL---------HVKSPFLETNWTKSD 318
Query: 180 TWKLAQDIG 188
+ ++ +G
Sbjct: 319 IREYSKLLG 327
>gi|20095126|ref|NP_614973.1| ATPase [Methanopyrus kandleri AV19]
gi|19888424|gb|AAM02903.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Methanopyrus kandleri AV19]
Length = 294
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ ++ + L+ SGG DS L AL D V L+ D G + E R+ + +++
Sbjct: 44 VRKALENSEKVLVAVSGGLDSLAALGLALRICDEVVALTVDTGALH-PEAWRRIILARRM 102
>gi|268680598|ref|YP_003305029.1| thiamine biosynthesis protein:ExsB [Sulfurospirillum deleyianum DSM
6946]
gi|268618629|gb|ACZ12994.1| thiamine biosynthesis protein:ExsB [Sulfurospirillum deleyianum DSM
6946]
Length = 327
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 43/129 (33%), Gaps = 23/129 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMP 65
AL+LFSGG DS ++ + + V L + G + LE R + +E++
Sbjct: 2 KALVLFSGGLDSMLAVNVLVQQGIEVIALHVNIGFGIKDDHYETLERRAKLAGACLEVID 61
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ L IL G K I + A +L R
Sbjct: 62 VRDEYL--QKILFSPKYG------YGKQFNPCIDCHGF-----------MFSVAKSLLPR 102
Query: 126 LGITNIVIG 134
G + I G
Sbjct: 103 YGASFIATG 111
>gi|83816193|ref|YP_445830.1| tRNA(Ile)-lysidine synthetase [Salinibacter ruber DSM 13855]
gi|83757587|gb|ABC45700.1| tRNA(Ile)-lysidine synthetase [Salinibacter ruber DSM 13855]
Length = 468
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
L+ SGG DS TCLS V L +YG R + + L R
Sbjct: 25 LVAASGGVDSMTCLSVLRRLDVDVHALHVNYGLRAGADGDEALVRR 70
>gi|317010016|gb|ADU80596.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori India7]
Length = 342
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 16/125 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+L SGG DSS ++ + + Y ++L ++ + K + LG
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---Y-----LKLHASEKKHDLYIKNVQKACEFLG 56
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLGIT 129
L + S++ ++ PN P N + A A +LG
Sbjct: 57 IP--LEVLDFQKDFKSAVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLGCE 111
Query: 130 NIVIG 134
I G
Sbjct: 112 KIATG 116
>gi|289596785|ref|YP_003483481.1| thiamine biosynthesis/tRNA modification protein ThiI
[Aciduliprofundum boonei T469]
gi|289534572|gb|ADD08919.1| thiamine biosynthesis/tRNA modification protein ThiI
[Aciduliprofundum boonei T469]
Length = 376
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 64/185 (34%), Gaps = 24/185 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A ++L S G DS + R ++ L ++ + + KKI+E+
Sbjct: 178 PVGSAGKLIMLISSGIDSPVAAYLMMKRGAKIIALHM----KHS---DSGVEKVKKILEV 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ ++ + L + S + ++ F L A +A
Sbjct: 231 LEQYSPR-----KIELVVKNHYEELSKISDKLREMHRERWTCVFCKY---TMLKIADRIA 282
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G IV G D G + +E + ++ PL+ + K E +
Sbjct: 283 NKYGALGIVTG----DSLG-----QVASQTLENMYIESQATSYPIYRPLIGMDKNEIEGI 333
Query: 184 AQDIG 188
A++IG
Sbjct: 334 AKNIG 338
>gi|218675488|ref|ZP_03525157.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhizobium etli GR56]
Length = 399
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 52/193 (26%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130
Query: 129 TNIVIGV-----------CETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
+ G + + R ++ + PL L
Sbjct: 131 DALATGHYIRSRPNPSLEHPGRRALF---RPADADRDQSYFLFATTQEQIDYLRFPLGGL 187
Query: 176 KKYETWKLAQDIG 188
K ET +LA+++G
Sbjct: 188 PKAETRRLAEEMG 200
>gi|254168750|ref|ZP_04875592.1| thiamine biosynthesis/tRNA modification protein ThiI
[Aciduliprofundum boonei T469]
gi|197622376|gb|EDY34949.1| thiamine biosynthesis/tRNA modification protein ThiI
[Aciduliprofundum boonei T469]
Length = 385
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 64/185 (34%), Gaps = 24/185 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A ++L S G DS + R ++ L ++ + + KKI+E+
Sbjct: 187 PVGSAGKLIMLISSGIDSPVAAYLMMKRGAKIIALHM----KHS---DSGVEKVKKILEV 239
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ ++ + L + S + ++ F L A +A
Sbjct: 240 LEQYSPR-----KIELVVKNHYEELSKISDKLREMHRERWTCVFCKY---TMLKIADRIA 291
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G IV G D G + +E + ++ PL+ + K E +
Sbjct: 292 NKYGALGIVTG----DSLG-----QVASQTLENMYIESQATSYPIYRPLIGMDKNEIEGI 342
Query: 184 AQDIG 188
A++IG
Sbjct: 343 AKNIG 347
>gi|39995542|ref|NP_951493.1| hypothetical protein GSU0434 [Geobacter sulfurreducens PCA]
gi|39982305|gb|AAR33766.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298504543|gb|ADI83266.1| thiamin biosynthesis protein ThiI-related adenine nucleotide
alpha hydrolase superfamily protein [Geobacter
sulfurreducens KN400]
Length = 334
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL L SGG DS+ + L++ VE L+F
Sbjct: 1 MKRKALALLSGGLDSTLAVKVMLEQGIEVEALNF 34
>gi|310827792|ref|YP_003960149.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium limosum KIST612]
gi|308739526|gb|ADO37186.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium limosum KIST612]
Length = 343
Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 16/129 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
K ++ FSGG DS+ + ++ V ++FD +G N+ LE + K+I
Sbjct: 2 KNKKVIVGFSGGADSAAAVLILKNKGYEVLGVTFDFFG--NEPLLEKASVLAKQIGIQHE 59
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + T N ++ D + R + A
Sbjct: 60 CINRQREFREKVIKPFISEYLRG-YTPNPCVRC-DAGMK-----FR-GLM-----AYANE 106
Query: 126 LGITNIVIG 134
I G
Sbjct: 107 KEAEFIATG 115
>gi|42521055|ref|NP_966970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Wolbachia endosymbiont of Drosophila melanogaster]
gi|81652123|sp|Q73FR5|MNMA_WOLPM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|42410796|gb|AAS14904.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Wolbachia endosymbiont of Drosophila melanogaster]
Length = 370
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSS + + +V ++ YG C + + +
Sbjct: 20 KAVVAMSGGVDSSVAAALLHNLGYKVVGVTLQLYGTDGNANARKGACCAGQDIYDAKRVA 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
+S+G H L +I + ++ A P N V R+++ +
Sbjct: 80 ESVGFPHYL--LNYEEIFKKEVIEDFASTYMRGETPIPCVRCNQTVKFRDLLQVT----- 132
Query: 123 AYRLGITNIVIG 134
LG +V G
Sbjct: 133 -KNLGADVLVTG 143
>gi|34580653|ref|ZP_00142133.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia sibirica 246]
gi|28262038|gb|EAA25542.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia sibirica 246]
Length = 365
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 64/202 (31%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 1 MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 61 IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 117
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + G +G D + ++ A + + +
Sbjct: 118 I------KTARELGADKLATGHYVRKING--DNGAELHTGLDPAKDQSYFLFTTTKEQLE 169
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL K ET KLA G
Sbjct: 170 YLRFPLGGFTKDETRKLASKFG 191
>gi|237743285|ref|ZP_04573766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 7_1]
gi|229433064|gb|EEO43276.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 7_1]
Length = 343
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ + ++ E + KK+ + +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLN---QHLEENSKDIEDAKKVCDKLEMIH 58
Query: 69 DSLGEDH 75
+
Sbjct: 59 KVVNIRK 65
>gi|84686908|ref|ZP_01014792.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Maritimibacter alkaliphilus HTCC2654]
gi|84665105|gb|EAQ11585.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacterales bacterium HTCC2654]
Length = 381
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 7/105 (6%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
+ ++ SGG DSS + V ++ Y + + C I +
Sbjct: 18 ESETRVVVAMSGGVDSSVVAAKLKREGYDVIGVTLQLYDHGAALAKKGACCAGVDIHDAR 77
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++ ++L +I ++ + A P VP
Sbjct: 78 RVAEEMGFPHYVLD---YENIFREAVIEEFADSYLGGATP---VP 116
>gi|302343985|ref|YP_003808514.1| hypothetical protein Deba_2565 [Desulfarculus baarsii DSM 2075]
gi|301640598|gb|ADK85920.1| hypothetical protein Deba_2565 [Desulfarculus baarsii DSM 2075]
Length = 696
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 25/93 (26%), Gaps = 6/93 (6%)
Query: 148 HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGK 207
I + TV P +W K E G D + +HT
Sbjct: 275 PQVINGFANIFSTLSGQPFTVENPFIWKTKTEVVSDIVKAGCADTIKFSTSCTHT----- 329
Query: 208 RDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
+ C +C C R+ + + D
Sbjct: 330 -WAMTKLNTHCGTCSQCIDRRFAVLAADAQEHD 361
>gi|261838653|gb|ACX98419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori 51]
Length = 342
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSTVYDEFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|157813156|gb|ABV81323.1| putative GMP synthetase [Antheraea paukstadtorum]
Length = 199
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG-QRNKVELECRLCVRKK 59
D + L+L SGG DS+ C + R D+V L D G R + C+R+
Sbjct: 39 DTVGDTNKVLVLVSGGVDSTVCAALLRTALREDQVIALHIDNGFMRKNESAKVERCLREL 98
Query: 60 IVEL 63
V L
Sbjct: 99 GVRL 102
>gi|157813158|gb|ABV81324.1| putative GMP synthetase [Cydia pomonella]
Length = 194
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
D + + L+L SGG DS+ C + R D+V L D G
Sbjct: 39 DAVGDSNKVLVLVSGGVDSTVCAALLRTALREDQVIALHIDNG 81
>gi|145299593|ref|YP_001142434.1| thiamine biosynthesis protein ThiI [Aeromonas salmonicida subsp.
salmonicida A449]
gi|189030615|sp|A4SP64|THII_AERS4 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|142852365|gb|ABO90686.1| thiamine biosynthesis protein ThiI [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 482
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 57/194 (29%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
+ L L SGG DS + R RV F+ G +I
Sbjct: 173 PMATQEDVLSLLSGGFDSGVASYQFIKRGCRVHYCFFNLG-----------GAAHEIGVK 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ G H + I + + K+ + + V R + + A
Sbjct: 222 QVAYYLWSKFGASHKVR---FTAIDFEPVVAEILEKVDNGQMG--VVLKR--MMMRAAGQ 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A I +V G C S + + + + + PL+ K +
Sbjct: 275 VADYFQIPALVTGECVGQVSS---------QTLTNLNVIDRVTDKVILRPLITWDKPDII 325
Query: 182 KLAQDIGGQDLVNL 195
A+ IG +
Sbjct: 326 SEARRIGTLEFAET 339
>gi|75910268|ref|YP_324564.1| tRNA-specific 2-thiouridylase MnmA [Anabaena variabilis ATCC 29413]
gi|123608374|sp|Q3M5R7|MNMA_ANAVT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|75703993|gb|ABA23669.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anabaena variabilis ATCC 29413]
Length = 352
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 41/200 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSST + ++ V L+ GQ C + +++
Sbjct: 2 KKVVVGLSGGVDSSTAAAILHNQGYEVIGLTLWLMKGKGQ----------CCSEGMIDAA 51
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ ++ + + T V + T +P + + F
Sbjct: 52 YICEQLGIPHEVVDMRDVFQ------THIVDYLVTGYGAGITPLPCSQCNKTVKFGPM-V 104
Query: 121 TLA-YRLGITNIVIG----VCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTV 168
A +LG I G + + SG R+ +RA++ +L +
Sbjct: 105 QYAREQLGCDRIATGHYARISYDEASG----RYQLLRAVDRNKDQSYFLYDLSQDLLAAS 160
Query: 169 HTPLMWLKKYETWKLAQDIG 188
PL ++K +T ++A + G
Sbjct: 161 LFPLGEMEKADTRRIATEHG 180
>gi|328542757|ref|YP_004302866.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase,
contains the PP-loop ATPase domain [polymorphum gilvum
SL003B-26A1]
gi|326412503|gb|ADZ69566.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Polymorphum gilvum SL003B-26A1]
Length = 393
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 33/126 (26%), Gaps = 4/126 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y V+ C + I + +
Sbjct: 15 RVVVAMSGGVDSSVVAGLMKQEGYDVVGVTLQLYDHGAAVQRAGACCAGQDIHDARRVAE 74
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 75 RLGIPHYVLD---YERRFKEAVIDRFAESYMAGETPIPCVACNQTVKFSDLLETARTLGA 131
Query: 129 TNIVIG 134
+ G
Sbjct: 132 DVLATG 137
>gi|237741407|ref|ZP_04571888.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 4_1_13]
gi|229430939|gb|EEO41151.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 4_1_13]
Length = 343
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ + ++ E + KK+ + +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLN---QHLEENSKDIEDAKKVCDKLGIIH 58
Query: 69 DSLGEDH 75
+
Sbjct: 59 KVVNIRK 65
>gi|34762114|ref|ZP_00143122.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27888191|gb|EAA25249.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 343
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V ++ + ++ E + KK+ + +
Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLN---QHLEENSKDIEDAKKVCDKLGIIH 58
Query: 69 DSLGEDH 75
+
Sbjct: 59 KVVNIRK 65
>gi|167757696|ref|ZP_02429823.1| hypothetical protein CLOSCI_00026 [Clostridium scindens ATCC 35704]
gi|167664578|gb|EDS08708.1| hypothetical protein CLOSCI_00026 [Clostridium scindens ATCC 35704]
Length = 393
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 60/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +E F + +K +
Sbjct: 176 PVGTNGKAMLLLSGGIDSPVAGYMISKRGVGIEATYF-----HAPPYTSERAKQKVVDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ ++ S+ + I I + + ++ + A
Sbjct: 231 RIVSRYSGSVKLHVVNFTDIQLYIYDQCPHDELTIIMRRY-------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + G ++ G + + +++ V V+ P++ K E
Sbjct: 278 FAKKDGCLGLITGESIGQVAS---------QTMQSLAATNDVCTVPVYRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ IG + E+
Sbjct: 329 DIAEKIGTYETSIQPFEDC 347
>gi|332255357|ref|XP_003276799.1| PREDICTED: argininosuccinate synthase isoform 3 [Nomascus
leucogenys]
Length = 525
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ D + S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 110 VQDAMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 161
>gi|154250437|ref|YP_001411262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fervidobacterium nodosum Rt17-B1]
gi|205816865|sp|A7HNX2|MNMA_FERNB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|154154373|gb|ABS61605.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fervidobacterium nodosum Rt17-B1]
Length = 348
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIV 61
+L SGG DS+ L +++ V Y + + EL ++ K+
Sbjct: 7 VLLSGGVDSAVALYLLIEKGYEVTA----YHMKTVRDELYITKQIKHKVC 52
>gi|189219049|ref|YP_001939690.1| tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
[Methylacidiphilum infernorum V4]
gi|189185907|gb|ACD83092.1| tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
[Methylacidiphilum infernorum V4]
Length = 367
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 1 MN-DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
MN IKK ++ SGG DS+ V ++
Sbjct: 3 MNVAPIKKNTRIVVGMSGGVDSTVAAYLLKREGFDVVGIT 42
>gi|119512160|ref|ZP_01631251.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nodularia spumigena CCY9414]
gi|119463191|gb|EAW44137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nodularia spumigena CCY9414]
Length = 351
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 41/200 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSST + + V L+ GQ C + +++
Sbjct: 2 KKVVVGLSGGVDSSTAAAILHHQGYEVIGLTLWLMKGKGQ----------CCSEGMIDAA 51
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ ++ + + T+ V + + T +P + + F
Sbjct: 52 DICEQLGVPHEVVDIREVFQ------TQIVDFLVTGYSAGITPLPCSQCNKTVKFGPM-V 104
Query: 121 TLA-YRLGITNIVIG----VCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTV 168
A +L I G + + +G R+ +RA++ +L E
Sbjct: 105 QYAREKLDCDRIATGHYAQINYDEATG----RYQLLRAVDRNKDQSYFLYDLSQELLKAT 160
Query: 169 HTPLMWLKKYETWKLAQDIG 188
PL L K +T ++A + G
Sbjct: 161 VFPLGKLDKADTRRIAAEYG 180
>gi|332532676|ref|ZP_08408552.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037892|gb|EGI74341.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas haloplanktis
ANT/505]
Length = 485
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R L F+ G + K
Sbjct: 176 PLPTQEDVLSLMSGGFDSGVASYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASY 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + + + + + + +NV V R + + + +A
Sbjct: 229 F-LWKKYSSTHKVKFITVDFEPVVAEILENVENSQMG------VVLKR--MMMRAGSVVA 279
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+L I +V G S + + + + + PL+ K E L
Sbjct: 280 EKLNIQALVTGESIGQVSS---------QTLANLSVIDRVTETLILRPLIQNDKQEIINL 330
Query: 184 AQDIGGQDLVNL 195
A+ IG ++
Sbjct: 331 ARQIGTAEMAET 342
>gi|325269878|ref|ZP_08136488.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Prevotella multiformis DSM 16608]
gi|324987851|gb|EGC19824.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Prevotella multiformis DSM 16608]
Length = 456
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 39/177 (22%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L + RVE + ++ R + L ++ L
Sbjct: 22 LVALSGGADSVALLLTLKELGYRVEAVHCNFQLRGEESLHDE------------RFCQEL 69
Query: 72 GEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+PL + + S + V++++ +L + F LG
Sbjct: 70 CRRENIPLHKVHFDTRSYATLHKVSIEMAARDLRYHY-------FFQLK----ETLGADA 118
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKYET 180
+ +G E D +TI + G++ + + PL+ + ++E
Sbjct: 119 VCVGHHEED-------SVETI-LMNLVRGTGLKGLMGIRPKKDGIVRPLLCVSRHEI 167
>gi|312881365|ref|ZP_07741162.1| argininosuccinate synthase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309371005|gb|EFP98460.1| argininosuccinate synthase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 403
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 25/149 (16%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K+A L LFSGG DS+ L + +V L D G E L +I +
Sbjct: 15 KRATHVLTLFSGGLDSTYLLELLKGQGVKVTALVVDLGSGVDTEHLTLLTNHYEIDLKIV 74
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + E I+ + + + ++ I + A +A
Sbjct: 75 DAQKNFIEHSIVSAIQAQAMYLNDYPISSSLSRP--------------IIVSNAVKVANE 120
Query: 126 LGITNIVIGVCET-----------DYSGY 143
LG I+ ++ + SGY
Sbjct: 121 LGCDAILHTANQSQNSLRRINGAIEASGY 149
>gi|260583639|ref|ZP_05851387.1| thiamine biosynthesis/tRNA modification protein ThiI
[Granulicatella elegans ATCC 700633]
gi|260158265|gb|EEW93333.1| thiamine biosynthesis/tRNA modification protein ThiI
[Granulicatella elegans ATCC 700633]
Length = 405
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R V+ + F + L K++ + + SL
Sbjct: 181 LMLSGGIDSPVAAYLAMKRGMEVQCVHFASPPYTSPQ---ALVKTKQLAAKVAIYGGSL- 236
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + +N L R + L L + I
Sbjct: 237 --------QFFTVPFTEIQEEIKKAVPENYLMTV---MRRM-MLRITDQLREKNHGLAIA 284
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +E+ I + ++ + P+ + K + +AQ+I +L
Sbjct: 285 NGESVGQVAS---------QTLESMIAINDVTNTPIIRPVATMDKLDIIAIAQEIDTFEL 335
Query: 193 VNLILEES 200
E+
Sbjct: 336 SIQPFEDC 343
>gi|237736558|ref|ZP_04567039.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium mortiferum ATCC 9817]
gi|229420420|gb|EEO35467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium mortiferum ATCC 9817]
Length = 352
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 13/81 (16%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVEL 63
++L SGG DSS + + V ++ + +K E L+ + KK+
Sbjct: 1 MNRKKVVLGMSGGVDSSISVYLLQKQGYEVIGVTLN----HKKEESLKEEIDSAKKVANF 56
Query: 64 MPKWKDSLGEDHILPLAILGD 84
+ ++ + +
Sbjct: 57 FNI------KHRVIDIEDIFQ 71
>gi|86138410|ref|ZP_01056984.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter sp. MED193]
gi|85824935|gb|EAQ45136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter sp. MED193]
Length = 381
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ D+ V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAYLADQGYDVIGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 82 ERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|315125902|ref|YP_004067905.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas sp. SM9913]
gi|315014416|gb|ADT67754.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas sp. SM9913]
Length = 485
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R L F+ G + K
Sbjct: 176 PLPTQDDVLSLMSGGFDSGVASYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASY 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + + + + + + +NV V R + + + +A
Sbjct: 229 Y-LWKQYSSTHKVKFITVDFEPVVAEILENVENSQMG------VVLKR--MMMRAGSAVA 279
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+L I +V G S + + + + + PL+ K E +
Sbjct: 280 EKLNIQALVTGESIGQVSS---------QTLANLSVIDRVTETLILRPLIQHDKQEIINI 330
Query: 184 AQDIGGQDLVNL 195
A+ IG ++
Sbjct: 331 ARQIGTAEMAET 342
>gi|182418877|ref|ZP_02950134.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium butyricum 5521]
gi|237667388|ref|ZP_04527372.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377160|gb|EDT74728.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium butyricum 5521]
gi|237655736|gb|EEP53292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium butyricum E4 str. BoNT E BL5262]
Length = 360
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 5/103 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVE 62
+ L+ SGG DSS ++ V + Q E E R C VE
Sbjct: 1 MSSKKKVLIGMSGGVDSSVAAYLLKEQGYEVIGATMQIWQ-EDKEFEEREGGCCSLSAVE 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+ D LG + D + + + D PN
Sbjct: 60 DARRVCDKLGIPFYV--LNFRDYFKEKVIEPFIQEYMDGRTPN 100
>gi|312136377|ref|YP_004003714.1| thiamine biosynthesis/tRNA modification protein thii
[Methanothermus fervidus DSM 2088]
gi|311224096|gb|ADP76952.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanothermus fervidus DSM 2088]
Length = 373
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ L SGG DS L + R V L FD
Sbjct: 176 KVIGLLSGGIDSPVALYLMMKRGCSVTALHFD 207
>gi|260426477|ref|ZP_05780456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Citreicella sp. SE45]
gi|260420969|gb|EEX14220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Citreicella sp. SE45]
Length = 380
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 7/104 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + + V ++ Y + + C I +
Sbjct: 18 SETRVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 77
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 78 VAEQMGFPHYVLD---YENIFRDAVIDEFAESYLGGATP---VP 115
>gi|288941240|ref|YP_003443480.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Allochromatium vinosum DSM 180]
gi|288896612|gb|ADC62448.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Allochromatium vinosum DSM 180]
Length = 371
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 75/226 (33%), Gaps = 39/226 (17%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKI 60
N A ++ SGG DS+ L++ VE L +N E + C +
Sbjct: 4 NAQTPSAQRVIVGLSGGVDSAIAAHRLLEQGYAVEALFM----KNWEEDDAEGYCAAAED 59
Query: 61 VELMPKWKDSLGED-HILPLAI--LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ + LG H + + + L + A++ + + + R I F
Sbjct: 60 LADARAVAERLGIRLHTVNFSAEYWDRVFEYFLREYQALRTPNPD----VLCNREIKFAA 115
Query: 118 FAATLAYRLGITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---- 169
F A LG I G V GY + A++ + +H
Sbjct: 116 F-LDHALGLGAEAIATGHYARVVADAQGGY---------HLHRAVDADKDQTYFLHLLDQ 165
Query: 170 -------TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKR 208
PL L K E LA+ +G + + C++G+R
Sbjct: 166 EQLSRALFPLADLTKGEVRALARRLGLANAAKKD--STGICFIGER 209
>gi|303243667|ref|ZP_07330008.1| Queuosine synthesis-like protein [Methanothermococcus okinawensis
IH1]
gi|302485909|gb|EFL48832.1| Queuosine synthesis-like protein [Methanothermococcus okinawensis
IH1]
Length = 292
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 11/103 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K + + SGG+DSST L A D D + F +K KKI + +
Sbjct: 37 KDKKIVSMLSGGKDSSTALHIAKDLGLDVCLCVHF----VHKWSWNLAKEQAKKIADKLD 92
Query: 66 KWKDSLGEDHILPLAILGDISHS------SLTKNVAMKIQDNN 102
L G S + K+ ++I +
Sbjct: 93 IPIIFYDITGDLKKRTKGAKGGSICRICKDIMKDKIIEIAKDE 135
>gi|319408925|emb|CBI82582.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella schoenbuchensis R1]
Length = 409
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 34/129 (26%), Gaps = 4/129 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++ SGG DSS V ++ C + +E +
Sbjct: 13 ENSRIVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGVATHRVGSCCAGQDIEDARR 72
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
++L H +L + ++ P V + A
Sbjct: 73 IAETLNIPHYVLD---YEERFREAVIDPFTESYTHGETPVPCVACNQTVKFSDLLATARE 129
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 130 LGADALATG 138
>gi|126338491|ref|XP_001372324.1| PREDICTED: similar to guanosine 5-monophosphate synthetase
[Monodelphis domestica]
Length = 815
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 70/214 (32%), Gaps = 49/214 (22%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG---QRNKVELECRLC---VRKKI 60
L+L SGG DS+ C + ALD+ D+V + D G +R +E L ++ K+
Sbjct: 360 KVLVLLSGGVDSTVCTALLNRALDQ-DQVIAVHIDNGFMRKRESQSVEEALRKLGIQVKV 418
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRN------- 112
V + + I S +L + + + + +TFV N
Sbjct: 419 VNAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMN 478
Query: 113 ----IIFLVFA---------ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN 159
+FL A+L I +T+ I
Sbjct: 479 LRPEEVFLAQGTLRPDLIESASLVASGKAEVIKTHHNDTE-----------------LIR 521
Query: 160 LGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
E + PL K E L +++G + +
Sbjct: 522 KLREEGKVIE-PLKDFHKDEVRILGRELGLPEEL 554
>gi|89073144|ref|ZP_01159683.1| thiamine biosynthesis protein ThiI [Photobacterium sp. SKA34]
gi|89051097|gb|EAR56554.1| thiamine biosynthesis protein ThiI [Photobacterium sp. SKA34]
Length = 483
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K S + + + + + K+ D + + R +F+ A +A
Sbjct: 227 IWKKFGSSAKVKFIAIDFEPVVG------EILEKVDDGQMG--VILKR--MFMRAAGKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +
Sbjct: 277 DKFGIEALVTGEALGQVSS---------QTLTNLRHIDGVTDSLILRPLINWDKEDIINV 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|291085764|ref|ZP_06571184.1| thiamine biosynthesis/tRNA modification protein ThiI [Citrobacter
youngae ATCC 29220]
gi|291069782|gb|EFE07891.1| thiamine biosynthesis/tRNA modification protein ThiI [Citrobacter
youngae ATCC 29220]
Length = 526
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 217 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 265
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 266 QVAHYLWNRFGSSHRVR---FIAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 318
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 319 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 369
Query: 182 KLAQDIGGQDLVNL 195
LA++IG +D
Sbjct: 370 NLAREIGTEDFART 383
>gi|330836493|ref|YP_004411134.1| tRNA sulfurtransferase [Spirochaeta coccoides DSM 17374]
gi|329748396|gb|AEC01752.1| tRNA sulfurtransferase [Spirochaeta coccoides DSM 17374]
Length = 405
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVE 62
+ A +LL SGG DS R +E++ F Y + LE + I
Sbjct: 174 PVGTAGKGMLLLSGGIDSPVAGYMMASRGLALESVYFHAYPYTSDEALEKVKTLASLIAP 233
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
H++P + + ++ ++ Q L + + A L
Sbjct: 234 YTHGMHL-----HVVPFTK----AQLWMRQHSNVEEQTLMLRAS--------MMKVAQAL 276
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+ G +V G + ++ + L PL+ ++K
Sbjct: 277 SLMRGAQALVTGEALGQVASQTLESMSFTDSMTDMLVLR---------PLVGMEKQAIIH 327
Query: 183 LAQDIGGQDLVNLILEES 200
LA+ IG + L E+
Sbjct: 328 LARTIGTYETSILPYEDC 345
>gi|197124542|ref|YP_002136493.1| thiamine biosynthesis protein [Anaeromyxobacter sp. K]
gi|220919267|ref|YP_002494571.1| thiamine biosynthesis protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|196174391|gb|ACG75364.1| thiamine biosynthesis protein [Anaeromyxobacter sp. K]
gi|219957121|gb|ACL67505.1| thiamine biosynthesis protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 351
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K A+ L SGG DS+ L+ + V+ ++F Y E + R R +
Sbjct: 1 MGKQGKAIGLISGGLDSTLALALVRGQGIEVKAVNF-YTGFCITETQRRKGGRPD-GTVP 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
D + + + V + N V R + + A +
Sbjct: 59 QNEALRAAADLEVDIEYVDISGPGYFDMLVNPRWGYGANANPCVDCR-VFMMRRAKEIME 117
Query: 125 RLGITNIVIG 134
G I G
Sbjct: 118 AEGADFIFTG 127
>gi|212636366|ref|YP_002312891.1| thiamine biosynthesis protein ThiI [Shewanella piezotolerans WP3]
gi|226703950|sp|B8CQH4|THII_SHEPW RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|212557850|gb|ACJ30304.1| Thiamine biosynthesis protein [Shewanella piezotolerans WP3]
Length = 484
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVE 62
+ L L SGG DS + R R F+ G ++++ + +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEI----------GVKQ 224
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ GE H + + + + + ++ + + V R + + AA +
Sbjct: 225 VAYHLWQKYGESHKVKFISVPF---DPVVQEILERVDNGQMG--VVLKR--MMMRAAARV 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++GI +V G S T+ + I+ E + PL+ + K +
Sbjct: 278 ADKMGIQALVTGEAMGQVSS------QTLTNLN-VIDRCTEQ--LILRPLIAMDKQDIIN 328
Query: 183 LAQDIGGQDLVNLILEES 200
++++IG +D I E
Sbjct: 329 ISREIGTEDFAKSIPEYC 346
>gi|237730399|ref|ZP_04560880.1| thiamine biosynthesis protein ThiI [Citrobacter sp. 30_2]
gi|226905938|gb|EEH91856.1| thiamine biosynthesis protein ThiI [Citrobacter sp. 30_2]
Length = 482
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA++IG +D
Sbjct: 326 NLAREIGTEDFART 339
>gi|226940740|ref|YP_002795814.1| tRNA-specific 2-thiouridylase MnmA [Laribacter hongkongensis HLHK9]
gi|226715667|gb|ACO74805.1| TrmU [Laribacter hongkongensis HLHK9]
Length = 359
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 7/132 (5%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +K ++ SGG DSS + V + Q + + + C K+
Sbjct: 1 MTEKKKRIVVGLSGGVDSSVTAYLLKQQGHEVIGVFM---QNWEDDNDSEYCSIKQDSLD 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-IFLVFAATL 122
D LG D + + + + + PN V N I
Sbjct: 58 AMSVADLLGID--MEIVNFAREYKERVFQYFLDEYSAGRTPNPDVLC-NAEIKFKAFLDY 114
Query: 123 AYRLGITNIVIG 134
A +LG I G
Sbjct: 115 AMQLGADCIATG 126
>gi|209964264|ref|YP_002297179.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodospirillum centenum SW]
gi|259495835|sp|B6ISD0|MNMA_RHOCS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|209957730|gb|ACI98366.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodospirillum centenum SW]
Length = 392
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 60/197 (30%), Gaps = 33/197 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V ++ Y V + C + I +
Sbjct: 14 RVVVAMSGGVDSSVTAALLKEQGYDVVGITLQLYDHGLTVGRKGACCAGQDIYDARQVAD 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
++L S+ + A P N V R+++
Sbjct: 74 RIDIPHYVLD---YESRFGQSVIDDFADSYLRGETPIPCVRCNQRVKFRDLL------AQ 124
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------P 171
A LG + G +G P T A+ + + + P
Sbjct: 125 ARDLGADCLATGHYARRVAG-P-----TGPALHRGADPARDQSYFLFATTPAQLDYLRFP 178
Query: 172 LMWLKKYETWKLAQDIG 188
+ L K ET LA+ +G
Sbjct: 179 IGHLPKSETRALAERLG 195
>gi|119775565|ref|YP_928305.1| thiamine biosynthesis protein ThiI [Shewanella amazonensis SB2B]
gi|189030645|sp|A1S8C9|THII_SHEAM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|119768065|gb|ABM00636.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
amazonensis SB2B]
Length = 484
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 67/189 (35%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + + R F+ G + E+ + ++
Sbjct: 175 PIAAQEDVLSLISGGFDSGVASFQFIKKGSRTHYCFFNLGG-AQHEI--------GVKQV 225
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ GE H + + + + +I++ + V R + + A +A
Sbjct: 226 AYHLWKTYGESHKVK---FVSVPFEEVVTEILERIENGQMG--VVLKR--MMMRAATRVA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+GI +V G S + + + + + + PL+ + K + +
Sbjct: 279 ERMGIQALVTGESLGQVSS---------QTLTNLNVIDRSTDLLILRPLISMDKPDIIRE 329
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 330 ARRIGTEDF 338
>gi|298373676|ref|ZP_06983665.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroidetes oral taxon 274 str. F0058]
gi|298274728|gb|EFI16280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroidetes oral taxon 274 str. F0058]
Length = 361
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 6/104 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ LL SGG DS+ + + + +++ D + E E C I+
Sbjct: 1 MSNKKKVLLSMSGGIDSTVAAILLMRQGYDLVGVTYRTWDSVSQGCFEREKGCCTINAIM 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
E + H L + S+ KN + PN
Sbjct: 61 EARRMAAEMGFPHHFLDI---RQKFRDSVIKNFIDEYLAGRTPN 101
>gi|149278290|ref|ZP_01884428.1| argininosuccinate synthetase [Pedobacter sp. BAL39]
gi|149231056|gb|EDM36437.1| argininosuccinate synthetase [Pedobacter sp. BAL39]
Length = 397
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 22/134 (16%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L FSGG D S C+ A DR V ++ + G ++ EL+ +
Sbjct: 1 MKKKVVLAFSGGLDTSFCCIYLAQDRGLEVHSVIVNTGGFSEEELQEIEKRAYALGVASH 60
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
D D + + G++ ++ + + + A +A
Sbjct: 61 AVVDETANYYDGCIKYLVFGNVLKNA---TYPLSVSAERV-------------SQATAIA 104
Query: 124 ---YRLGITNIVIG 134
++G + G
Sbjct: 105 NYVKKIGADYVAHG 118
>gi|149191104|ref|ZP_01869363.1| thiamine biosynthesis protein ThiI [Vibrio shilonii AK1]
gi|148835032|gb|EDL52010.1| thiamine biosynthesis protein ThiI [Vibrio shilonii AK1]
Length = 482
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R + F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKTHYCFFNLGG------PAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K++D + + R +F+ LA
Sbjct: 227 LWNKYGSSAKVKFISVDFEPVVA------EILEKVEDGQMG--VILKR--MFMRVGGMLA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFGIEALVTGEALGQVSS---------QTLTNLRHIDGVTDTLILRPLINWDKEDIIDL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|15602400|ref|NP_245472.1| thiamine biosynthesis protein ThiI [Pasteurella multocida subsp.
multocida str. Pm70]
gi|13431925|sp|P57849|THII_PASMU RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|12720799|gb|AAK02619.1| ThiI [Pasteurella multocida subsp. multocida str. Pm70]
Length = 480
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSASHKVRFVAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASRIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI IV G S + + + S V PL+ K + +
Sbjct: 277 ERFGIQAIVTGEALGQVSS---------QTLTNLRLIDEASESLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|88798697|ref|ZP_01114280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Reinekea sp. MED297]
gi|88778460|gb|EAR09652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Reinekea sp. MED297]
Length = 364
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 15/134 (11%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELM 64
++ SGG DSS + L++ +VE L +N E + C K+ +
Sbjct: 4 NSETKVIVGMSGGVDSSVTAALLLEQGYQVEGLFM----KNWDEDDGTEYCTAKEDLADA 59
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
D LG L A ++ ++ + + PN P R I F F
Sbjct: 60 QAVADRLGIH--LHKANFAAEYWDNVFEHFLEEYKAGRTPN---PDILCNREIKFKAF-L 113
Query: 121 TLAYRLGITNIVIG 134
A LG I G
Sbjct: 114 EYALTLGADKIATG 127
>gi|224011487|ref|XP_002295518.1| ASSY [Thalassiosira pseudonana CCMP1335]
gi|209583549|gb|ACI64235.1| ASSY [Thalassiosira pseudonana CCMP1335]
Length = 418
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK 47
M+ K P +L +SGG D+S L W ++ V D GQ ++
Sbjct: 1 MSTPTK--PKVVLAYSGGLDTSVILKWLCEKGFDVIAFCADVGQHHE 45
>gi|196232683|ref|ZP_03131534.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chthoniobacter flavus Ellin428]
gi|196223143|gb|EDY17662.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chthoniobacter flavus Ellin428]
Length = 363
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 56/192 (29%), Gaps = 33/192 (17%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS + V ++ + Q E + C + I +
Sbjct: 1 MSGGVDSSVAAYLLKRQGYDVVGVTMKVWPQDCISRAEDKCCGPQAIADARGVAHALGVP 60
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATLAYRLG 127
+++ G+ + + ++ P N V N+ A LG
Sbjct: 61 HYVVDE---GENFERLVIDYFTEEYKNGRTPNPCVMCNEKVKFGNL------WGKAKALG 111
Query: 128 ITNIVIGV-----CETDYSGY---PDCRHD---TIRAIETAINLGMESHVTVHTPLMWLK 176
I G D + D R D + ++ A PL +
Sbjct: 112 AEYIATGHYAIIEHHADRAVLRKGRDPRKDQSYFLFSLRQAQLQ------HAICPLGEMS 165
Query: 177 KYETWKLAQDIG 188
K E +A+ +G
Sbjct: 166 KPEIRAIARQLG 177
>gi|260433794|ref|ZP_05787765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Silicibacter lacuscaerulensis ITI-1157]
gi|260417622|gb|EEX10881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Silicibacter lacuscaerulensis ITI-1157]
Length = 381
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 7/104 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS ++ D+ V ++ Y + + C I +
Sbjct: 19 SETRVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 78
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++ ++L +I ++ A P VP
Sbjct: 79 VAEERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|237756601|ref|ZP_04585118.1| thiamine biosynthesis protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691232|gb|EEP60323.1| thiamine biosynthesis protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 355
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ L+SGG DS+ + ++ V L F
Sbjct: 1 MKRKAVALYSGGLDSTLAIKLVQNQGIDVLALHF 34
>gi|188997212|ref|YP_001931463.1| thiamine biosynthesis protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932279|gb|ACD66909.1| thiamine biosynthesis protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 355
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ L+SGG DS+ + ++ V L F
Sbjct: 1 MKRKAVALYSGGLDSTLAIKLVQNQGIDVLALHF 34
>gi|304314860|ref|YP_003850007.1| GMP synthase, subunit B [Methanothermobacter marburgensis str.
Marburg]
gi|302588319|gb|ADL58694.1| GMP synthase, subunit B [Methanothermobacter marburgensis str.
Marburg]
Length = 308
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 46/195 (23%)
Query: 9 PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++ SGG DSS A D + + D+G +R+ E + K
Sbjct: 22 EKAIIALSGGVDSSVASVLAGKAIGDNLTAVFVDHG-----------LLREGEAEYVKKT 70
Query: 68 KDSLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + LG++ + + I GR +F+ +A
Sbjct: 71 FSDRLNFRYIDASDEFLGELEGVTDPEEKRKII-----------GR--VFIEVFERVAEE 117
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRA-------IETAINLGMESHVTVHTPLMWLKKY 178
+G +V G D I + A+ G+ + + P+ L K
Sbjct: 118 IGARYLVQGTIA----------PDWIESEGKIKSHHNVALPHGLV--LEIVEPIRELYKD 165
Query: 179 ETWKLAQDIGGQDLV 193
E ++ ++G +
Sbjct: 166 EVREIGLELGLPREM 180
>gi|209694506|ref|YP_002262434.1| thiamine biosynthesis protein ThiI [Aliivibrio salmonicida LFI1238]
gi|226726948|sp|B6EIB2|THII_ALISL RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|208008457|emb|CAQ78623.1| thiamine biosynthesis protein ThiI [Aliivibrio salmonicida LFI1238]
Length = 482
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V + F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYMFFNLGG------PAHEIGVKQVSHF 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K S + + + ++ + K+ D + + R +F+ +A
Sbjct: 227 LWKKYGSSAKVKFIAVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAGGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+LGI +V G S + + ++ + + PL+ K + +
Sbjct: 277 EKLGIQGMVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINV 327
Query: 184 AQDIGGQDL 192
A+DIG +D
Sbjct: 328 ARDIGTEDF 336
>gi|144899505|emb|CAM76369.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Magnetospirillum gryphiswaldense MSR-1]
Length = 360
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 20/139 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIV 61
+ ++ SGG DSS + ++ V ++ +D+GQ C C K I
Sbjct: 1 MTAKGRIVVAMSGGVDSSATAALLKEQGWDVVGVTLQLYDHGQAVCRPNTC--CAGKDIH 58
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIF 115
+ +++ + H+ + A P N V R++
Sbjct: 59 DARTVADVLGIPHYVMD---MESTFHADVVDKFAESYIRGETPIPCVLCNQTVKFRDL-- 113
Query: 116 LVFAATLAYRLGITNIVIG 134
++A LG + G
Sbjct: 114 ----FSIARDLGADALATG 128
>gi|163731902|ref|ZP_02139349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter litoralis Och 149]
gi|161395356|gb|EDQ19678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter litoralis Och 149]
Length = 380
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGLDIHDARRVSE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++L +I ++ A P VP
Sbjct: 82 KMGFPHYVLD---YENIFKDAVIDEFAESYLGGATP---VP 116
>gi|160940891|ref|ZP_02088231.1| hypothetical protein CLOBOL_05783 [Clostridium bolteae ATCC
BAA-613]
gi|158436135|gb|EDP13902.1| hypothetical protein CLOBOL_05783 [Clostridium bolteae ATCC
BAA-613]
Length = 394
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 65/199 (32%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +++ + F + +K +
Sbjct: 176 PVGTNGRAMLLLSGGIDSPVAGYMIAKRGVKIDAVYF-----HAPPYTSERAKQKVVDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ ++ + + I I + + + ++ + A T
Sbjct: 231 NLVARYAGPINLHVVNFTDIQLYIYDKCPHEELTIIMRRY-------------MMRIAQT 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G ++ G + T++++ + + V P++ K E
Sbjct: 278 IAERTGSIGLITGESIGQVAS------QTLQSLAATNEVCT---MPVFRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+++ IG + E+
Sbjct: 329 DVSEKIGTYETSIQPYEDC 347
>gi|167764091|ref|ZP_02436218.1| hypothetical protein BACSTE_02474 [Bacteroides stercoris ATCC
43183]
gi|167698207|gb|EDS14786.1| hypothetical protein BACSTE_02474 [Bacteroides stercoris ATCC
43183]
Length = 350
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRKKIV 61
+K LL SGG DSS + V ++F + G + + + R + +
Sbjct: 1 MKSKERVLLGMSGGTDSSVAAMKLQEAGYEVTGVTFRFYEVGGKTEYLEDARALAGRLGI 60
Query: 62 ELMPKWKDSLGEDHIL 77
E + L + I+
Sbjct: 61 EHITYDARELFRERII 76
>gi|83592433|ref|YP_426185.1| PP-loop protein [Rhodospirillum rubrum ATCC 11170]
gi|83575347|gb|ABC21898.1| PP-loop protein [Rhodospirillum rubrum ATCC 11170]
Length = 462
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 63/197 (31%), Gaps = 49/197 (24%)
Query: 7 KAPSALLL-FSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ A+ + SGG DS T L+ WA +R R + FD+G R E R
Sbjct: 29 EPEPAIAVGVSGGVDSLTLLAFAARWAAERGGRCTAVCFDHGLRAASAGEAR-------- 80
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ SLG + ++ SS + A + + + L
Sbjct: 81 -LVETTARSLGAEAVV--LRWAGPPPSSGVQEAARRARLDGL----------------LG 121
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI----------RAIETAINLGMESHVTVHTP 171
G+ ++++ D + +T+ + L + P
Sbjct: 122 WCAGAGVLHLLLAHHRDDQA-------ETVLQRLGRGSGADGLAAMAALSSRGEARILRP 174
Query: 172 LMWLKKYETWKLAQDIG 188
+ + + A+ IG
Sbjct: 175 FLEVPRAAIEASARRIG 191
>gi|51473501|ref|YP_067258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia typhi str. Wilmington]
gi|73920129|sp|Q68X66|MNMA_RICTY RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|51459813|gb|AAU03776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia typhi str. Wilmington]
Length = 358
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 64/191 (33%), Gaps = 25/191 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V ++ +DYG V + C K I +
Sbjct: 5 VVAMSGGVDSSAVAAMLHEQGHHVIGITLQLYDYG--IAVGKKNACCAGKDIYDAKMVAN 62
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----NTFVPGRNIIFLVFAATLAY 124
++L S N + + LP N V R++I A
Sbjct: 63 KLGIPHYVLDYENKFKESVIDNFVNSYLH-GETPLPCVQCNKLVKFRDLI------NTAK 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMWLKK 177
LG + G +GY + ++ A + E + PL K
Sbjct: 116 ELGADKLATGHYVRKINGY--NGAELHTGLDAAKDQSYFLFTITREQLEYLIFPLGGFTK 173
Query: 178 YETWKLAQDIG 188
YET KLA G
Sbjct: 174 YETRKLASKFG 184
>gi|262038412|ref|ZP_06011786.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
goodfellowii F0264]
gi|261747507|gb|EEY34972.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
goodfellowii F0264]
Length = 395
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 46/210 (21%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L+L SGG DS R R+ ++F + + + +KI EL
Sbjct: 178 PIGSTGKGLVLLSGGIDSPVASFLMAKRGMRINFVTF-----HSFPFTSKQAL-EKIKEL 231
Query: 64 MPKWKDSLGEDHILPLAILG-DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
G+ + + IL + ++ TK I + A L
Sbjct: 232 TEILSIYTGKSRLYAVNILKIQEAINTKTKKELATILTRRA-----------MMRLAEKL 280
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES---------HVTVHTPLM 173
A + ++ G ++ + + + V PL+
Sbjct: 281 ANSMQYQALITG-----------------ESLGQVASQTLGGLTCTNASVEKLPVFRPLI 323
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTC 203
K E ++A++IG + E+ +C
Sbjct: 324 GADKTEIIEIAKEIGTYEKSIEPHED--SC 351
>gi|237749831|ref|ZP_04580311.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter bilis ATCC 43879]
gi|229374581|gb|EEO24972.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter bilis ATCC 43879]
Length = 347
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 21/136 (15%)
Query: 5 IKKAPSALLLF-SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIV 61
+++ + L SGG DSS + V + Y + + E + + +R +K+
Sbjct: 1 MEQNKKKVALLMSGGVDSSYSAYLLQQQGYEVLGI---YLKLHDKEEKHAVFIRNCEKVC 57
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVF 118
E + + A+ + S + PN P N +
Sbjct: 58 EFLGLEFKIIEAKEEFKKAVYNEFIES---------YKRGETPN---PCALCNPLMKFGL 105
Query: 119 AATLAYRLGITNIVIG 134
A A G I G
Sbjct: 106 ALNAALGYGCEYIATG 121
>gi|114768812|ref|ZP_01446438.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[alpha proteobacterium HTCC2255]
gi|114549729|gb|EAU52610.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[alpha proteobacterium HTCC2255]
Length = 382
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
K L+ SGG DSS + + V ++ Y + + C + I +
Sbjct: 22 KDTRVLVAMSGGVDSSVVAAMLSEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIQDARR 81
Query: 66 KWKDSLGEDHILP 78
++ ++L
Sbjct: 82 VAEEMGFPHYVLD 94
>gi|297538087|ref|YP_003673856.1| argininosuccinate synthase [Methylotenera sp. 301]
gi|297257434|gb|ADI29279.1| argininosuccinate synthase [Methylotenera sp. 301]
Length = 406
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S L W D + V T + D GQ ++E + E+
Sbjct: 1 MSKVNKVVLAYSGGLDTSVILKWLQDEYQCEVVTFTADLGQGEELEPARAKAKAAGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|208435231|ref|YP_002266897.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori G27]
gi|229486341|sp|B5Z8Y2|MNMA_HELPG RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|208433160|gb|ACI28031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter pylori G27]
Length = 342
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYSLKEQGHELVGV---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S++ ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSTVYDEFISAYEEGQTPN---PCTLCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
I G V E D Y I+ A++ + ++ PL
Sbjct: 110 CEKIATGHYARVKEIDKVSY----------IQEALDKTKDQSYFLYALEHEVIAKLVFPL 159
Query: 173 MWLKKYET 180
L K +
Sbjct: 160 GDLLKKDI 167
>gi|270263556|ref|ZP_06191825.1| thiamine biosynthesis protein ThiI [Serratia odorifera 4Rx13]
gi|270042440|gb|EFA15535.1| thiamine biosynthesis protein ThiI [Serratia odorifera 4Rx13]
Length = 482
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R RV F+ G K++
Sbjct: 173 PVGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------AAHEIGVKQVAYY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +AI + + + K+ D + V R + + A+ +A
Sbjct: 227 L--WNRFASSHKVRFVAIDFE----PVVGEILEKVDDGQMG--VVLKR--MMVRAASQVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K K+
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIIKV 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|205822510|sp|Q5FR73|MNMA_GLUOX RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 361
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 9/128 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
L+ SGG DSS + + V + +D+GQ K C + I++
Sbjct: 2 RILVAMSGGVDSSVVAALLKRQGHEVIGATLQLYDHGQAAKP---GACCAGRDIMDARAV 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+++ S+ ++ A P V + +A L
Sbjct: 59 ADRLGFPHYVID---AESRFRDSVVESFADAYARGETPVPCVACNQGVKFTDLLGMARDL 115
Query: 127 GITNIVIG 134
G + G
Sbjct: 116 GCEAMATG 123
>gi|119608339|gb|EAW87933.1| argininosuccinate synthetase, isoform CRA_b [Homo sapiens]
Length = 450
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ D + S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 35 VRDAMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 86
>gi|291294752|ref|YP_003506150.1| asparagine synthase (glutamine-hydrolyzing) [Meiothermus ruber DSM
1279]
gi|290469711|gb|ADD27130.1| asparagine synthase (glutamine-hydrolyzing) [Meiothermus ruber DSM
1279]
Length = 611
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELMPKWKDS 70
+ SGG DSS + A + +RV + F YG Q + E + +K +
Sbjct: 273 VSLSGGLDSSLVAALAAQQHERV--VGFCYGHPQAPRSEGPLARELAQKAGIDVHFVWPE 330
Query: 71 LGEDHIL 77
L ++H++
Sbjct: 331 LSKEHLV 337
>gi|156973488|ref|YP_001444395.1| thiamine biosynthesis protein ThiI [Vibrio harveyi ATCC BAA-1116]
gi|189030671|sp|A7MYC5|THII_VIBHB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|156525082|gb|ABU70168.1| hypothetical protein VIBHAR_01178 [Vibrio harveyi ATCC BAA-1116]
Length = 482
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 QKMKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIVNL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|114766932|ref|ZP_01445852.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pelagibaca bermudensis HTCC2601]
gi|114540839|gb|EAU43901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseovarius sp. HTCC2601]
Length = 380
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 7/104 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + + V ++ Y + + C I +
Sbjct: 18 SETRVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 77
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 78 VAEQMGFPHYVLD---YENIFRDAVIDEFAESYLGGATP---VP 115
>gi|301780780|ref|XP_002925806.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Ailuropoda
melanoleuca]
Length = 699
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL + D+V + D G K E + KK+
Sbjct: 244 KVLVLLSGGVDSTVCTALLNRALSQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 296
>gi|302686048|ref|XP_003032704.1| argininosuccinate synthetase [Schizophyllum commune H4-8]
gi|300106398|gb|EFI97801.1| argininosuccinate synthetase [Schizophyllum commune H4-8]
Length = 426
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 13/125 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+ +SGG D+S L+W +++ V D GQ E + +K + K+
Sbjct: 7 RVLIAYSGGLDTSCILAWLIEQGYEVYAFMADVGQ----EEDFAAAEKKALKVGAKKFFL 62
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ + I + + + +NV + P V R ++ ++A R G
Sbjct: 63 EDLKREFVEELIYPAVQANCIYENVYLLGTSLARP---VIARGMM------SVADREGCD 113
Query: 130 NIVIG 134
+ G
Sbjct: 114 YVSHG 118
>gi|281343173|gb|EFB18757.1| hypothetical protein PANDA_015366 [Ailuropoda melanoleuca]
Length = 784
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL + D+V + D G K E + KK+
Sbjct: 329 KVLVLLSGGVDSTVCTALLNRALSQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 381
>gi|150401423|ref|YP_001325189.1| ExsB family protein [Methanococcus aeolicus Nankai-3]
gi|150014126|gb|ABR56577.1| ExsB family protein [Methanococcus aeolicus Nankai-3]
Length = 203
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A +LFSGG+DSS C + VE ++ ++G
Sbjct: 2 KACVLFSGGKDSSLCAIILKNLGYDVELVTINFG 35
>gi|160903153|ref|YP_001568734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Petrotoga mobilis SJ95]
gi|205816886|sp|A9BIS3|MNMA_PETMO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|160360797|gb|ABX32411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Petrotoga mobilis SJ95]
Length = 367
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+L SGG DSS ++ V L F
Sbjct: 2 SNKKVLMLMSGGVDSSVAAYLLKEQNYHVIGLHF 35
>gi|73990460|ref|XP_866440.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
(Glutamine amidotransferase) (GMP synthetase) isoform 6
[Canis familiaris]
Length = 690
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL + D+V + D G K E + KK+
Sbjct: 243 KVLVLLSGGVDSTVCTALLNRALSQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 295
>gi|73990462|ref|XP_866454.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
(Glutamine amidotransferase) (GMP synthetase) isoform 7
[Canis familiaris]
Length = 700
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL + D+V + D G K E + KK+
Sbjct: 245 KVLVLLSGGVDSTVCTALLNRALSQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 297
>gi|73990454|ref|XP_866405.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
(Glutamine amidotransferase) (GMP synthetase) isoform 3
[Canis familiaris]
Length = 727
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL + D+V + D G K E + KK+
Sbjct: 245 KVLVLLSGGVDSTVCTALLNRALSQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 297
>gi|73990456|ref|XP_866417.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
(Glutamine amidotransferase) (GMP synthetase) isoform 4
[Canis familiaris]
Length = 724
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL + D+V + D G K E + KK+
Sbjct: 243 KVLVLLSGGVDSTVCTALLNRALSQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 295
>gi|57103704|ref|XP_534316.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
(Glutamine amidotransferase) (GMP synthetase) isoform 1
[Canis familiaris]
gi|73990451|ref|XP_852817.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
(Glutamine amidotransferase) (GMP synthetase) isoform 2
[Canis familiaris]
Length = 698
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL + D+V + D G K E + KK+
Sbjct: 243 KVLVLLSGGVDSTVCTALLNRALSQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 295
>gi|254510076|ref|ZP_05122143.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacteraceae bacterium KLH11]
gi|221533787|gb|EEE36775.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacteraceae bacterium KLH11]
Length = 381
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 7/104 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS ++ D+ V ++ Y + + C I +
Sbjct: 19 SETRVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 78
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++ ++L +I ++ A P VP
Sbjct: 79 VAEERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|254475742|ref|ZP_05089128.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruegeria sp. R11]
gi|214029985|gb|EEB70820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruegeria sp. R11]
Length = 381
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 7/104 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS ++ D+ V ++ Y + + C I +
Sbjct: 19 SETRVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 78
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++ ++L +I ++ A P VP
Sbjct: 79 VAEERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|254465357|ref|ZP_05078768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacterales bacterium Y4I]
gi|206686265|gb|EDZ46747.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacterales bacterium Y4I]
Length = 381
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 7/104 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS ++ D+ V ++ Y + + C I +
Sbjct: 19 SETRVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 78
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++ ++L +I ++ A P VP
Sbjct: 79 VAEERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|323495112|ref|ZP_08100199.1| tRNA s(4)U8 sulfurtransferase [Vibrio brasiliensis LMG 20546]
gi|323310663|gb|EGA63840.1| tRNA s(4)U8 sulfurtransferase [Vibrio brasiliensis LMG 20546]
Length = 482
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A+DIG +D
Sbjct: 328 ARDIGTEDF 336
>gi|261252278|ref|ZP_05944851.1| thiamine biosynthesis protein ThiI [Vibrio orientalis CIP 102891]
gi|260935669|gb|EEX91658.1| thiamine biosynthesis protein ThiI [Vibrio orientalis CIP 102891]
Length = 482
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A+DIG +D
Sbjct: 328 ARDIGTEDF 336
>gi|116253697|ref|YP_769535.1| tRNA-specific 2-thiouridylase MnmA [Rhizobium leguminosarum bv.
viciae 3841]
gi|205816894|sp|Q1MC84|MNMA_RHIL3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|115258345|emb|CAK09447.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhizobium leguminosarum bv. viciae 3841]
Length = 408
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 52/193 (26%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 23 RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 82
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 83 TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 139
Query: 129 TNIVIGV-----------CETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
+ G + + R ++ + PL L
Sbjct: 140 DALATGHYIRSGRNPSPENPGRRALF---RPADADRDQSYFLFATTQEQIDYLRFPLGGL 196
Query: 176 KKYETWKLAQDIG 188
K ET +LA+++G
Sbjct: 197 PKAETRRLAEEMG 209
>gi|293400445|ref|ZP_06644590.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305471|gb|EFE46715.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 391
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
++K A LL SGG DS+ ++ V
Sbjct: 2 VMKMAQKVLLGLSGGVDSAVAAYILKEQGYDVTC 35
>gi|108757976|ref|YP_633262.1| argininosuccinate synthase [Myxococcus xanthus DK 1622]
gi|108461856|gb|ABF87041.1| argininosuccinate synthase [Myxococcus xanthus DK 1622]
Length = 396
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +L FSGG D++ C + ++ V T++ D G +LE + K++ +
Sbjct: 1 MSNKKNVVLAFSGGLDTAFCAVYLREQGYDVTTVTVDTGGFPPEQLERIAALSKQLGAV 59
>gi|330468683|ref|YP_004406426.1| asparagine synthase [Verrucosispora maris AB-18-032]
gi|328811654|gb|AEB45826.1| asparagine synthase (glutamine-hydrolyzing) [Verrucosispora maris
AB-18-032]
Length = 536
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 59/198 (29%), Gaps = 59/198 (29%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS--------FDYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS L A R ++ Y +R EL VR ++VEL
Sbjct: 232 VVLSGGLDSSLVLLHAAQRHPDCVAVTVGVPDSPDVAYARRLAGEL----GVRHEVVELR 287
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
P+ + ++ L + VP IF A
Sbjct: 288 PRDIRLADVREAIRISELTEYGDIINA-------------VVSVP----IFRRLA----- 325
Query: 125 RLGITNIVIGVCETD-YSGYPD--------------------CRHDTIRAIETAINLGME 163
LG+ ++ G + + GYP CR + ++ M
Sbjct: 326 ELGVKVVLTGDGSDELFGGYPMYHEVGPQAARRLFLHKIRNLCRTE----LQRVDRTSMG 381
Query: 164 SHVTVHTPLMWLKKYETW 181
V P + L E
Sbjct: 382 FGVEARVPFLDLALVELA 399
>gi|312884942|ref|ZP_07744632.1| thiamine biosynthesis protein ThiI [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367419|gb|EFP94981.1| thiamine biosynthesis protein ThiI [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 482
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWSKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGIIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 EKFAIQGLVTGEAIGQVSS---------QTLTNLRHIDGVTDRLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|294660494|ref|NP_853282.2| thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
R(low)]
gi|284812155|gb|AAP56850.2| Thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
R(low)]
gi|284930768|gb|ADC30707.1| Thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
R(high)]
gi|284931327|gb|ADC31265.1| Thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
F]
Length = 396
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 24/211 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE-LECRLCVRKKIVE 62
+K + L+L SGG DS R V+ L+F + L+ + + + + +
Sbjct: 170 PVKSSGKVLVLLSGGIDSPVASDLLYKRGMHVDFLTFITPPHTSKQALDKTVLLAQTVSK 229
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + + L +ISH+ +N + + F A L
Sbjct: 230 HNEVSDAKIFIHNFTNV--LKEISHTKY-ENYRITLMRR------------CFYKIANKL 274
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+ G I G + TI ++ AI+ + + + PL+ K + +
Sbjct: 275 INQYGYDCIATGESLGQVAS------QTINSM-KAISNASKDLLVLR-PLLCYDKSQIIE 326
Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYE 213
A+ I ++ L ++ + Y K+
Sbjct: 327 HAKKIKTYEISILPYSDACSLYAPKKPITNP 357
>gi|27262188|gb|AAN87375.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Heliobacillus mobilis]
Length = 376
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 2/99 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++ SGG DSS + L++ V ++ ++ E C VE +
Sbjct: 1 MPETVVVAMSGGVDSSVTAALLLEKGYNVIGVTLQIWPKDAPEGAEGGCCSLSAVEDARR 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+LG H + D + + PN
Sbjct: 61 VAFTLGIPHYVM--NFRDYFEEEVINYFGQEYLAGQTPN 97
>gi|84500833|ref|ZP_00999068.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanicola batsensis HTCC2597]
gi|84390900|gb|EAQ03318.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanicola batsensis HTCC2597]
Length = 382
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGLDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 82 EMGFPHYVLD---YENIFRDAVIDEFADSYLAGATP---VP 116
>gi|323704377|ref|ZP_08115956.1| Queuosine synthesis-like protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536443|gb|EGB26215.1| Queuosine synthesis-like protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 275
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 61/192 (31%), Gaps = 45/192 (23%)
Query: 5 IKKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
I+K SA++ FSGG DS+ C DR V S Y QR E + + K+I
Sbjct: 14 IEKLGSAVIAFSGGVDSTFLAKVCYDVLKDRCVAVTATSSTYPQR---EFKEAQELAKQI 70
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
G H + + +I S + L
Sbjct: 71 -----------GIRHRIIRSEELEIEGFSKNPIDRCYYCKSEL------------FSKLK 107
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKY 178
+A GI ++ G D + R + V +PL+ K
Sbjct: 108 NVAEEEGIEYVLDGTNYDDTGDF---RP----------GRRAARELGVKSPLLECGFTKN 154
Query: 179 ETWKLAQDIGGQ 190
+ ++++ +G
Sbjct: 155 DIREMSKILGLP 166
>gi|224025546|ref|ZP_03643912.1| hypothetical protein BACCOPRO_02286 [Bacteroides coprophilus DSM
18228]
gi|224018782|gb|EEF76780.1| hypothetical protein BACCOPRO_02286 [Bacteroides coprophilus DSM
18228]
Length = 361
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG---QRNKVELECRLCVR 57
N ++K LL SGG DSS D V ++F Y Q +E LC +
Sbjct: 7 NGPMEKNNKVLLGMSGGTDSSVAAMLLQDAGYEVTGITFRFYEKDFQTEYLEDARHLCEQ 66
Query: 58 KKIVELMPKWKDSLGEDHI 76
I L ++ E I
Sbjct: 67 LGIRHLTYDAREVFEEQII 85
>gi|126737635|ref|ZP_01753365.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter sp. SK209-2-6]
gi|126721028|gb|EBA17732.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter sp. SK209-2-6]
Length = 381
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ D+ V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 82 ERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|113461045|ref|YP_719112.1| thiamine biosynthesis protein ThiI [Haemophilus somnus 129PT]
gi|122945282|sp|Q0I3G4|THII_HAES1 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|112823088|gb|ABI25177.1| [ThiS-adenylate] sulfurtransferase [Haemophilus somnus 129PT]
Length = 484
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-ATHEIGVKQMAYH----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK G + +AI + + + + V V R + + A+ +A
Sbjct: 227 --IWKRFSGSHKVRFVAINFEQVVAEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI IV G S + + + + V PL+ K +
Sbjct: 277 QRFGIQAIVTGEALGQVSS---------QTLTNLRLIDEAAESLVLRPLITHDKEQIIAK 327
Query: 184 AQDIGGQDL 192
A++IG +D+
Sbjct: 328 AKEIGTEDI 336
>gi|259416977|ref|ZP_05740897.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Silicibacter sp. TrichCH4B]
gi|259348416|gb|EEW60193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Silicibacter sp. TrichCH4B]
Length = 381
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ ++ V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAYLAEQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 82 ERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|225850620|ref|YP_002730854.1| thiamine biosynthesis protein [Persephonella marina EX-H1]
gi|225645577|gb|ACO03763.1| thiamine biosynthesis protein [Persephonella marina EX-H1]
Length = 352
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
K A+ L+SGG DS+ + ++ V + F
Sbjct: 6 KGKKAVALYSGGLDSTLAIKLIQNQGIDVTAVHF 39
>gi|319760374|ref|YP_004124312.1| tRNA sulfurtransferase [Candidatus Blochmannia vafer str. BVAF]
gi|318039088|gb|ADV33638.1| tRNA sulfurtransferase [Candidatus Blochmannia vafer str. BVAF]
Length = 499
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 30/213 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIV 61
+ +L L SGG DS+ + R +V F+ + +E+ KI+
Sbjct: 173 PVGTQQESLSLISGGFDSTVASYMLIRRGCKVHYCFFNLIGNITHTIEV-------YKII 225
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ W G + +++ I L + L + + A+T
Sbjct: 226 SYL--WNKFSGSHKVKLISVDFSIVVKELFMKIKNNYIGIILKR--------MMIRAAST 275
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA I ++V G S T+ + N+ S V PL+ K
Sbjct: 276 LASHYKIKSLVTGESLGQVSS------QTLDNLILINNVVSSSDCIVFRPLIVHDKESII 329
Query: 182 KLAQDIGGQDLVNLILEES-----HTCYLGKRD 209
KLA+ IG ++L I E +C K+
Sbjct: 330 KLARQIGTEELSRTIPEYCGLISKRSCAKAKKK 362
>gi|167772390|ref|ZP_02444443.1| hypothetical protein ANACOL_03767 [Anaerotruncus colihominis DSM
17241]
gi|167665493|gb|EDS09623.1| hypothetical protein ANACOL_03767 [Anaerotruncus colihominis DSM
17241]
Length = 389
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 58/194 (29%), Gaps = 31/194 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPK 66
A+LL SGG DS R + + F Y + +E LC KK+ +
Sbjct: 180 RAMLLISGGIDSPVAGYMMGKRGLEIAAVHFVSPPYTSAHALEKVRTLC--KKMAAWCGR 237
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + LAI T + + A LA
Sbjct: 238 VRLFVVPFTETQLAIRDRCPEDVFTIIMRR-----------------CMMKIAERLAREN 280
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ G + + ++ + V P++ + K E K+A
Sbjct: 281 GCGALITGESVAQVAS---------QTLDAIACTDAACTMPVLRPVIGMDKDEIVKVAYK 331
Query: 187 IGGQDLVNLILEES 200
I + L E+
Sbjct: 332 IDTFETSILPYEDC 345
>gi|88811810|ref|ZP_01127063.1| hypothetical protein NB231_05456 [Nitrococcus mobilis Nb-231]
gi|88790694|gb|EAR21808.1| hypothetical protein NB231_05456 [Nitrococcus mobilis Nb-231]
Length = 441
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 69/207 (33%), Gaps = 36/207 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMPKW 67
S L L SGG DS R RV L L L + K++ +
Sbjct: 206 SVLSLLSGGIDSPVAAFLMAKRGCRVNFLHMTATHLAADRLRENLVSRIAKRLSIYTLRS 265
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLV-FAATLAY 124
+ L LA++G P+ F + R F+ L
Sbjct: 266 RLFLVPYTHFDLALIGQ------------------PPSGFEMILFRR--FIARLGTRLVE 305
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
R G +V+G D G + +E ++ + + + PL+ + K E + A
Sbjct: 306 RHGGQALVVG----DSLG-----QVASQTLENIVSHSQATALPILRPLIGMDKQEIVERA 356
Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKR 211
+ IG +L ++ C L R R
Sbjct: 357 RTIGTYELSTEPYKDC--CALLSRHPR 381
>gi|315127675|ref|YP_004069678.1| hypothetical protein PSM_A2613 [Pseudoalteromonas sp. SM9913]
gi|315016189|gb|ADT69527.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
Length = 444
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 74/229 (32%), Gaps = 31/229 (13%)
Query: 10 SALLLFSGGQDSSTCLSWAL--DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+++ LFSGG DS+ L + + +S Y + + + + EL
Sbjct: 150 NSVCLFSGGLDSAVGAIDILNGESDLKPLLVSHAYRGDGAKQEDIKQLLSPPFGELSYSM 209
Query: 68 KDSLGEDH--ILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAA 120
+ + +++ G + + + D+++ VP N ++
Sbjct: 210 SPHIIKHLEGKTDISMRGRSFNFLAMAVLGISALRNANCDSSIETIVVPE-NG-YISINP 267
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
L R IG T + + + +E+ + HV P + K E
Sbjct: 268 PLTRRR------IGSHSTRTTH-----PNFLSRLESLLRD-TGFHVKFVNPYQFKTKGEM 315
Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
D QD + + S +C + C C C +R+
Sbjct: 316 LAECVD---QDAIRKAVPLSVSC-----SHWHREHKQCGHCVPCLIRRA 356
>gi|326926259|ref|XP_003209320.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Meleagris
gallopavo]
Length = 710
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ L+L SGG DS+ C + AL+R D+V + D G K E + KK+
Sbjct: 253 SSKVLVLLSGGVDSTVCTALLNRALNR-DQVIAVHIDNGFMRKRESQSVEEALKKL 307
>gi|284006406|emb|CBA71642.1| thiamine biosynthesis protein [Arsenophonus nasoniae]
Length = 465
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 63/192 (32%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ + ++
Sbjct: 156 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-TSHEI--------GVKQV 206
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
G H + I + + + KI D + V R + + A+T+A
Sbjct: 207 AYHLWHRFGRSHKVR---FVAIDFAPIVSEILTKIDDGQMG--VVLKR--MIIRAASTIA 259
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + + + PL+ K +
Sbjct: 260 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVTDTLILRPLISHDKENIINI 310
Query: 184 AQDIGGQDLVNL 195
A++IG D
Sbjct: 311 AREIGTADFART 322
>gi|194378708|dbj|BAG63519.1| unnamed protein product [Homo sapiens]
Length = 594
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + ALD+ ++V + D G K E + KK+
Sbjct: 139 KVLVLLSGGVDSTVCTALLNRALDQ-EQVIAVHIDNGFMRKRESQSVEEALKKL 191
>gi|110679829|ref|YP_682836.1| tRNA-specific 2-thiouridylase MnmA [Roseobacter denitrificans OCh
114]
gi|123065538|sp|Q166E3|MNMA_ROSDO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|109455945|gb|ABG32150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter denitrificans OCh 114]
Length = 380
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGLDIHDARRVSE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++L +I ++ A P VP
Sbjct: 82 KMGFPHYVLD---YENIFKDAVIDEFAESYLGGATP---VP 116
>gi|57529561|ref|NP_001006556.1| GMP synthase [Gallus gallus]
gi|53136506|emb|CAG32582.1| hypothetical protein RCJMB04_30a22 [Gallus gallus]
Length = 693
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ L+L SGG DS+ C + AL+R D+V + D G K E + KK+
Sbjct: 236 SSKVLVLLSGGVDSTVCTALLNRALNR-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|333029750|ref|ZP_08457811.1| Argininosuccinate synthase [Bacteroides coprosuis DSM 18011]
gi|332740347|gb|EGJ70829.1| Argininosuccinate synthase [Bacteroides coprosuis DSM 18011]
Length = 401
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 14/130 (10%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L FSGG D S + + D V T + G ++ EL+ ++
Sbjct: 1 MKKKVVLAFSGGLDTSFCAMYLSKDLGYDVYTAIANTGGFDEEELKTIEEKAYRLGA--- 57
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
++H+ S +++ P + R IF A A
Sbjct: 58 -------KEHVTLDVTQEYYDKSIKYMIYGNVLRNGTYPISVSSER--IFQAIAIANYAK 108
Query: 125 RLGITNIVIG 134
+ I G
Sbjct: 109 EINADAIAHG 118
>gi|313147999|ref|ZP_07810192.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides fragilis 3_1_12]
gi|313136766|gb|EFR54126.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides fragilis 3_1_12]
Length = 364
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE--LECRLCVRKKI 60
++++ LL SGG DSS L+ V ++F Y + E + R +
Sbjct: 1 MMEENKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNDSTEYLEDARALATRLG 60
Query: 61 VELMPKWKDSLGEDHILP 78
+E + + I+
Sbjct: 61 IEHITYDAREIFRKKIVD 78
>gi|34419491|ref|NP_899504.1| hypothetical protein KVP40.0258 [Vibrio phage KVP40]
gi|34333172|gb|AAQ64327.1| hypothetical protein KVP40.0258 [Vibrio phage KVP40]
Length = 228
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 34/116 (29%), Gaps = 18/116 (15%)
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
GRN + ++ + I G+ + D Y D I + + +
Sbjct: 77 GRNTLMFN---SVFHAFRPNVIYRGMLKGDDFYY-DASPTHSDEIAAMWSKMLNKECRIE 132
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
P K + ++A + G L+ CY + C C C
Sbjct: 133 QPFKDKTKRDIMQMAVEYGIDAN---SLQH---CYN--------REHNCGRCSKCV 174
>gi|99081242|ref|YP_613396.1| tRNA-specific 2-thiouridylase MnmA [Ruegeria sp. TM1040]
gi|123077645|sp|Q1GGT2|MNMA_SILST RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|99037522|gb|ABF64134.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruegeria sp. TM1040]
Length = 381
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ D+ V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 82 ERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|163868748|ref|YP_001609965.1| tRNA-specific 2-thiouridylase MnmA [Bartonella tribocorum CIP
105476]
gi|205812594|sp|A9IWH0|MNMA_BART1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|161018412|emb|CAK01970.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella tribocorum CIP 105476]
Length = 407
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 33/129 (25%), Gaps = 10/129 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y C + I + +
Sbjct: 16 RIVVAMSGGVDSSVVAGLLKREGYNVIGITLQLYDHGAATHRVGACCAGQDIEDARRVAE 75
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRN-IIFLVFAATLAYR 125
++L ++ A P VP N + A
Sbjct: 76 MLGIPHYVLD---YEKRFREAVIDPFAESYAHGETP---VPCIACNQTVKFADLLATARE 129
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 130 LGADALATG 138
>gi|56696559|ref|YP_166916.1| tRNA-specific 2-thiouridylase MnmA [Ruegeria pomeroyi DSS-3]
gi|81349989|sp|Q5LST9|MNMA_SILPO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|56678296|gb|AAV94962.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruegeria pomeroyi DSS-3]
Length = 375
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 7/104 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS ++ D+ V ++ Y + + C I +
Sbjct: 13 SETRVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 72
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++ ++L +I ++ A P VP
Sbjct: 73 VAEERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 110
>gi|327266954|ref|XP_003218268.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Anolis
carolinensis]
Length = 707
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 250 SSKVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 304
>gi|301607403|ref|XP_002933290.1| PREDICTED: LOW QUALITY PROTEIN: GMP synthase
[glutamine-hydrolyzing]-like [Xenopus (Silurana)
tropicalis]
Length = 702
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 236 SSKVLVLLSGGVDSTVCTALLNKALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|312116059|ref|YP_004013655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodomicrobium vannielii ATCC 17100]
gi|311221188|gb|ADP72556.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodomicrobium vannielii ATCC 17100]
Length = 395
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 16/135 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS + ++ Y + + C + I++
Sbjct: 31 SSHRIVVAMSGGVDSSLTAALVKRAGYDTVGITLQLYDHGEAMARKGACCAGQDIMDARG 90
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFA 119
++L D S+ + A P N V R+++
Sbjct: 91 VADRLGVPHYVLD---YEDRFRQSVIDDFADSYLAGETPVPCVRCNQTVKFRDLL----- 142
Query: 120 ATLAYRLGITNIVIG 134
A LG + +V G
Sbjct: 143 -GAARELGASALVTG 156
>gi|224073526|ref|XP_002195318.1| PREDICTED: argininosuccinate synthetase 1 [Taeniopygia guttata]
Length = 397
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ ++ ++L +SGG D+S L W ++ V + GQ+ E R +
Sbjct: 1 MAQSKGTVVLAYSGGLDTSCILVWLKEQGYDVVAYLANIGQKEDFEAARRKALA 54
>gi|332214514|ref|XP_003256381.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 2 [Nomascus
leucogenys]
Length = 594
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 139 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 191
>gi|332214512|ref|XP_003256380.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 1 [Nomascus
leucogenys]
Length = 693
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|313678598|ref|YP_004056338.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma bovis PG45]
gi|312950108|gb|ADR24703.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma bovis PG45]
Length = 374
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ +L SGG DSS C L + VE L
Sbjct: 1 MSNKKKVILGMSGGVDSSVCAYLLLKQGYEVEGL 34
>gi|311269579|ref|XP_003132551.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Sus scrofa]
Length = 330
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 95 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 147
>gi|300715577|ref|YP_003740380.1| thiamine biosynthesis protein ThiI [Erwinia billingiae Eb661]
gi|299061413|emb|CAX58525.1| Thiamine biosynthesis protein ThiI [Erwinia billingiae Eb661]
Length = 482
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K++D + V R + + A+
Sbjct: 222 QVAHYLWNRFGRSHKVR---FVAINFEPVVGEILEKVEDGQMG--VVLKR--MMVRAASQ 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R + +V G S + + + S + PL+ K
Sbjct: 275 IAERYDVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARHIGTEDFART 339
>gi|296227744|ref|XP_002759511.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] [Callithrix
jacchus]
Length = 693
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|291400046|ref|XP_002716320.1| PREDICTED: guanine monophosphate synthetase [Oryctolagus cuniculus]
Length = 713
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 258 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 310
>gi|269962339|ref|ZP_06176689.1| thiamin biosynthesis protein ThiI [Vibrio harveyi 1DA3]
gi|269832835|gb|EEZ86944.1| thiamin biosynthesis protein ThiI [Vibrio harveyi 1DA3]
Length = 482
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 QKMKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|269965066|ref|ZP_06179231.1| thiamin biosynthesis protein ThiI [Vibrio alginolyticus 40B]
gi|269830369|gb|EEZ84594.1| thiamin biosynthesis protein ThiI [Vibrio alginolyticus 40B]
Length = 482
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 QKMKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|262395022|ref|YP_003286876.1| thiamine biosynthesis protein ThiI [Vibrio sp. Ex25]
gi|262338616|gb|ACY52411.1| thiamine biosynthesis protein ThiI [Vibrio sp. Ex25]
Length = 465
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 156 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 209
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 210 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMIA 259
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ I +V G S + + ++ + + PL+ K + L
Sbjct: 260 QKMKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 310
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 311 AREIGTEDF 319
>gi|149641234|ref|XP_001512299.1| PREDICTED: similar to guanosine 5-monophosphate synthetase, partial
[Ornithorhynchus anatinus]
Length = 631
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 176 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 228
>gi|149064654|gb|EDM14805.1| guanine monphosphate synthetase, isoform CRA_a [Rattus norvegicus]
Length = 529
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|148377683|ref|YP_001256559.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma agalactiae PG2]
gi|205816906|sp|A5IYK6|MNMA_MYCAP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|148291729|emb|CAL59115.1| TRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
[Mycoplasma agalactiae PG2]
Length = 374
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ +L SGG DSS C L + VE L
Sbjct: 1 MSNKKKVILGMSGGVDSSVCAYLLLKQGYEVEGL 34
>gi|152995561|ref|YP_001340396.1| argininosuccinate synthase [Marinomonas sp. MWYL1]
gi|189046393|sp|A6VVI2|ASSY_MARMS RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|150836485|gb|ABR70461.1| Argininosuccinate synthase [Marinomonas sp. MWYL1]
Length = 410
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S W + + V T + D GQ +VE I E+
Sbjct: 1 MSDVKKVVLAYSGGLDTSVIAKWLQEEYNCEVVTFTADLGQGEEVEPARAKAQALGIKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIEDLREEFVRDFVFPMFRANTIYEGEYLLGTSIA 95
>gi|109048628|ref|XP_001105046.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 1 [Macaca
mulatta]
gi|297286583|ref|XP_002803006.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 2 [Macaca
mulatta]
Length = 693
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|91229459|ref|ZP_01262926.1| thiamine biosynthesis protein ThiI [Vibrio alginolyticus 12G01]
gi|91187395|gb|EAS73749.1| thiamine biosynthesis protein ThiI [Vibrio alginolyticus 12G01]
Length = 482
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 QKMKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|74144707|dbj|BAE27334.1| unnamed protein product [Mus musculus]
Length = 693
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|51873878|gb|AAH80685.1| Gmps protein [Mus musculus]
Length = 477
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 22 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 74
>gi|85861218|ref|NP_001028472.2| GMP synthase [glutamine-hydrolyzing] [Mus musculus]
gi|145558920|sp|Q3THK7|GUAA_MOUSE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|74139380|dbj|BAE40832.1| unnamed protein product [Mus musculus]
gi|74146610|dbj|BAE41314.1| unnamed protein product [Mus musculus]
gi|74226222|dbj|BAE25299.1| unnamed protein product [Mus musculus]
gi|148703454|gb|EDL35401.1| mCG6377, isoform CRA_a [Mus musculus]
gi|187952891|gb|AAI38412.1| Guanine monphosphate synthetase [Mus musculus]
gi|187953909|gb|AAI38413.1| Guanine monphosphate synthetase [Mus musculus]
Length = 693
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|67078508|ref|NP_001019925.1| GMP synthase [glutamine-hydrolyzing] [Rattus norvegicus]
gi|81908630|sp|Q4V7C6|GUAA_RAT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|66910916|gb|AAH98016.1| Guanine monphosphate synthetase [Rattus norvegicus]
Length = 693
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|74212049|dbj|BAE40189.1| unnamed protein product [Mus musculus]
Length = 693
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|74193453|dbj|BAE20667.1| unnamed protein product [Mus musculus]
Length = 682
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 227 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 279
>gi|254228601|ref|ZP_04922025.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio sp.
Ex25]
gi|151938780|gb|EDN57614.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio sp.
Ex25]
Length = 378
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 QKMKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|225568733|ref|ZP_03777758.1| hypothetical protein CLOHYLEM_04812 [Clostridium hylemonae DSM
15053]
gi|225162232|gb|EEG74851.1| hypothetical protein CLOHYLEM_04812 [Clostridium hylemonae DSM
15053]
Length = 393
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 59/199 (29%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +E F + +K +
Sbjct: 176 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVGIEATYF-----HAPPYTSERAKQKVVDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ ++ + + I I + + ++ + A
Sbjct: 231 RLVSRYSGPVKLHVVNFTDIQLYIYDQCPHDELTIIMRRY-------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + G ++ G + + +++ + V+ P++ K E
Sbjct: 278 FAKKDGCLGLITGESIGQVAS---------QTMQSLAATNDVCTLPVYRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ IG + E+
Sbjct: 329 DIAEKIGTFETSIQPFEDC 347
>gi|15966466|ref|NP_386819.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sinorhizobium meliloti 1021]
gi|24638324|sp|Q92MB5|MNMA_RHIME RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|15075737|emb|CAC47292.1| Putative tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Sinorhizobium meliloti 1021]
Length = 398
Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 50/193 (25%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y V C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TIGIPHYVLD---YEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGA 130
Query: 129 TNIVIGV-----------CETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
+ G + Y R ++ + PL L
Sbjct: 131 DALATGHYIRSRPSPKPRYAGQRALY---RPADAERDQSYFLFATTQEQIDYLRFPLGGL 187
Query: 176 KKYETWKLAQDIG 188
K ET LA+++G
Sbjct: 188 PKSETRALAEEMG 200
>gi|269836239|ref|YP_003318467.1| argininosuccinate synthase [Sphaerobacter thermophilus DSM 20745]
gi|269785502|gb|ACZ37645.1| argininosuccinate synthase [Sphaerobacter thermophilus DSM 20745]
Length = 396
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 21/130 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ +SGG DS+ C+ A +++ V ++ D GQ E E K
Sbjct: 2 KKIAVAYSGGLDSTLCIVLAREKYGAEVVPITVDVGQ---GEGEIAESFAK--------- 49
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR-- 125
D LG +L + + + LT+ + P + R +I AA +A +
Sbjct: 50 ADVLGITPLL-IDARAEFAEEWLTRAIRANSDYEGYPVSTSMTRQLI----AAKVAEKAL 104
Query: 126 -LGITNIVIG 134
LG ++ G
Sbjct: 105 ELGCDAVMEG 114
>gi|328852300|gb|EGG01447.1| hypothetical protein MELLADRAFT_45152 [Melampsora larici-populina
98AG31]
Length = 436
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ LL +SGG D+S L+W +++ V D GQ + + E KI
Sbjct: 1 MTDSKGKVLLAYSGGLDTSCILAWLIEQGYEVVAFMADVGQ--EEDFEAARLKALKIGA 57
>gi|315185969|gb|EFU19733.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Spirochaeta thermophila DSM 6578]
Length = 376
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 43/133 (32%), Gaps = 10/133 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
++ ++ SGG DSS L V L+F R E +
Sbjct: 17 TRRPRRLVVAMSGGVDSSVTAHLLLSAGIEVVGLTFI---RVNTPAEVDHEGFSEEARAA 73
Query: 65 PKWKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATL 122
+ LG E H+L L D+ S + + + + PN V R + F
Sbjct: 74 REVASHLGIEHHVLNL---HDLYTSRVLRRAWEEYRSGRTPNPCVLCNRTLKF-GHLVRY 129
Query: 123 A-YRLGITNIVIG 134
A L I G
Sbjct: 130 AREVLRADGIATG 142
>gi|319935498|ref|ZP_08009933.1| tRNA-specific 2-thiouridylase mnmA [Coprobacillus sp. 29_1]
gi|319809529|gb|EFW05946.1| tRNA-specific 2-thiouridylase mnmA [Coprobacillus sp. 29_1]
Length = 379
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ +L SGG DS+ ++ V +
Sbjct: 1 MFMKEKVVLGLSGGVDSAVAAYLLKEQGYEVICV 34
>gi|198420645|ref|XP_002127818.1| PREDICTED: similar to arginosuccinate synthetase [Ciona
intestinalis]
Length = 407
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ + +L +SGG D+S L W +++ +V + GQ E+ +R
Sbjct: 1 MASKETVVLAYSGGLDTSCILVWLIEQGYKVIGFLVNVGQNEDFEVAREKGLR 53
>gi|194221748|ref|XP_001488278.2| PREDICTED: similar to GMPS protein [Equus caballus]
Length = 1032
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + KK+
Sbjct: 577 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALKKL 629
>gi|330829149|ref|YP_004392101.1| tRNA sulfurtransferase [Aeromonas veronii B565]
gi|328804285|gb|AEB49484.1| tRNA sulfurtransferase [Aeromonas veronii B565]
Length = 482
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 59/194 (30%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIATQEDVLSLLSGGFDSGVASFQFIKRGCRVHYCFFNLG-----------GAAHEIGVK 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + + + + KI + + V R + + AA
Sbjct: 222 QVAYHLWNRFGSSHRVR---FTAVDFEPVVAEILEKIDNGQMG--VVLKR--MMMRAAAK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A I +V G C S + + + + + PL+ K +
Sbjct: 275 VADEFQIPALVTGECVGQVSS---------QTLTNLNVIDRVTDKVILRPLITWDKPDII 325
Query: 182 KLAQDIGGQDLVNL 195
A+ IG +
Sbjct: 326 SEARRIGTLEFAET 339
>gi|325953943|ref|YP_004237603.1| argininosuccinate synthase [Weeksella virosa DSM 16922]
gi|323436561|gb|ADX67025.1| argininosuccinate synthase [Weeksella virosa DSM 16922]
Length = 393
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 14/130 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A+L +SGG D+S CL ++ + T+ + G +K EL+ ++
Sbjct: 1 MSKKAVLAYSGGLDTSYCLVNLTQEQGMEMHTVIVNTGGFSKEELKEIEKRAYELGS-AK 59
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
+ E + + + + + F A A
Sbjct: 60 HVTIDITEKYFTDCIRFLIYGNVLKNNTYPLSVSAERM-----------FQSIAIAEYAK 108
Query: 125 RLGITNIVIG 134
+ IV G
Sbjct: 109 EIDAEYIVHG 118
>gi|262306111|gb|ACY45648.1| gln amidotransferase [Tomocerus sp. 'Tom2']
Length = 196
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
+ L+L SGG DS+ C + R D++ + D G
Sbjct: 42 RNQKVLMLLSGGVDSTVCAALLKKALREDQIIAVHVDNG 80
>gi|50411729|ref|XP_457073.1| DEHA2B02420p [Debaryomyces hansenii CBS767]
gi|49652738|emb|CAG85061.1| DEHA2B02420p [Debaryomyces hansenii]
Length = 416
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ K + L +SGG D+S L+W L+ V + GQ E R +
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEEGYEVIAYLANIGQEEDFEEAERKALA 52
>gi|78186206|ref|YP_374249.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium luteolum DSM 273]
gi|123583498|sp|Q3B625|MNMA_PELLD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|78166108|gb|ABB23206.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium luteolum DSM 273]
Length = 367
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ +K ++ SGG DSS + V L
Sbjct: 1 MERKKKKVIVGLSGGVDSSVAACMLVREGYEVLGLH 36
>gi|82581174|emb|CAI12844.1| argininosuccinate synthetase [Agaricus bisporus]
gi|82581176|emb|CAI12846.1| argininosuccinate synthetase [Agaricus bisporus]
Length = 425
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +LL +SGG D+S L+W ++ V D GQ E + +K +
Sbjct: 1 MPENKGRVLLAYSGGLDTSCILAWLIEEGYEVYAFMADVGQ----EEDYAAAEQKALKVG 56
Query: 64 MPKW 67
K+
Sbjct: 57 AKKF 60
>gi|291514930|emb|CBK64140.1| argininosuccinate synthase [Alistipes shahii WAL 8301]
Length = 401
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 24/137 (17%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ +L FSGG D S + ++ V T + G +K ELE + K+ +EL
Sbjct: 1 METKKKVVLAFSGGLDTSFCVKYLSEEKGYDVYTAIANTGGFSKPELE---KIEKRAMEL 57
Query: 64 MPKWKDSLGE-----DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+L + + + G+I + + + IF
Sbjct: 58 GATAHATLDIEQEYYEKSIRYMVFGNILRN---GTYPISVSSER-----------IFQAI 103
Query: 119 AAT-LAYRLGITNIVIG 134
A A ++G + G
Sbjct: 104 AIIEYAKQIGADAVAHG 120
>gi|260576792|ref|ZP_05844777.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacter sp. SW2]
gi|259021044|gb|EEW24355.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacter sp. SW2]
Length = 379
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS + + V ++ Y + + C + I +
Sbjct: 17 QETRVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARR 76
Query: 66 KWKDSLGEDHILP 78
+ ++L
Sbjct: 77 VAEAMGFPHYVLD 89
>gi|326572739|gb|EGE22725.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis BC7]
Length = 496
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 43/198 (21%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVE 62
+ L L SGG DS + R RV F+ GQ + EL +
Sbjct: 183 PMSTQEDVLSLISGGFDSGVASHMFMRRGSRVHYCFFNLGGQAH--ELGVKQMAYH---- 236
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
W + + + + + + K + V R + + A+ +
Sbjct: 237 ---LWSRYSLSHKVWFITVDFEPVVAEILKTIDDGHMG------VVLKR--MMVKAASQI 285
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMW 174
A ++ I +V G A+ + + + + PL+
Sbjct: 286 AQQIKIQALVTG-----------------EAMGQVASQTLTNLNAIDAASSTLILRPLIT 328
Query: 175 LKKYETWKLAQDIGGQDL 192
K + K+A+ IG ++
Sbjct: 329 SDKEDIIKMAEKIGTANI 346
>gi|296112963|ref|YP_003626901.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis RH4]
gi|295920657|gb|ADG61008.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis RH4]
gi|326561188|gb|EGE11553.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 7169]
gi|326563003|gb|EGE13278.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 46P47B1]
gi|326567925|gb|EGE18022.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis BC1]
gi|326573871|gb|EGE23823.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 101P30B1]
Length = 496
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 43/198 (21%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVE 62
+ L L SGG DS + R RV F+ GQ + EL +
Sbjct: 183 PMSTQEDVLSLISGGFDSGVASHMFMRRGSRVHYCFFNLGGQAH--ELGVKQMAYH---- 236
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
W + + + + + + K + V R + + A+ +
Sbjct: 237 ---LWSRYSLSHKVWFITVDFEPVVAEILKTIDDGHMG------VVLKR--MMVKAASQI 285
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMW 174
A ++ I +V G A+ + + + + PL+
Sbjct: 286 AQQIKIQALVTG-----------------EAMGQVASQTLTNLNAIDAASSTLILRPLIT 328
Query: 175 LKKYETWKLAQDIGGQDL 192
K + K+A+ IG ++
Sbjct: 329 SDKEDIIKMAEKIGTANI 346
>gi|294635307|ref|ZP_06713805.1| thiamine biosynthesis/tRNA modification protein ThiI [Edwardsiella
tarda ATCC 23685]
gi|291091316|gb|EFE23877.1| thiamine biosynthesis/tRNA modification protein ThiI [Edwardsiella
tarda ATCC 23685]
Length = 482
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 61/197 (30%), Gaps = 41/197 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K+ D + V R + + A+ +A
Sbjct: 227 LWNRFGSSHRVRFVAIDFAPVVG------EILEKVDDGQMG--VVLKR--MMVRAASRVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWL 175
R GI +V G A+ + + + + PL+
Sbjct: 277 ERYGIQALVTG-----------------EALGQVSSQTLTNLRLIDGVSDTLVLRPLIAH 319
Query: 176 KKYETWKLAQDIGGQDL 192
K +LA++IG +D
Sbjct: 320 DKEHIIRLAREIGTEDF 336
>gi|257092531|ref|YP_003166172.1| hypothetical protein CAP2UW1_0906 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045055|gb|ACV34243.1| conserved hypothetical protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 458
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 73/242 (30%), Gaps = 42/242 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK-- 68
+L LFSGG DS L +S + E K +L ++
Sbjct: 151 SLCLFSGGLDSLIGAINLLQAESAPLLIS------HFGESATSDAQNKLFAKLKKQYARS 204
Query: 69 --DSLGEDHILPLAILGDISHSSLTKNVAM------KIQDNNLPNTF---VPGRNIIFLV 117
D L ++ D+ + T+ + L N F VP N +
Sbjct: 205 AFDRLRVGMTFDDGLVKDVGSENSTRGRSFLFFALGVFAGTGLRNGFTLKVPE-NGL--- 260
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN-LGMESHVTVHTPLMWLK 176
+A + + + +G T + + ++ LG++ V P + +
Sbjct: 261 ----IALNVPLDPLRLGSNSTRTTH-----PYFMARWNDLLDELGIDG--RVENPYLPMT 309
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGK----RDKRYEWGYGCNSCPACYLRQKGWM 232
K E Q L+ + S +C + + C C C +R+
Sbjct: 310 KGEMV---LACANQKLLLELAPMSLSCAHPANARWQGHKGRGIEHCGYCLPCLIRRAALN 366
Query: 233 EF 234
Sbjct: 367 RA 368
>gi|119386805|ref|YP_917860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paracoccus denitrificans PD1222]
gi|205816904|sp|A1B9H0|MNMA_PARDP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|119377400|gb|ABL72164.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paracoccus denitrificans PD1222]
Length = 389
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 9/102 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C + I + +
Sbjct: 30 RVVVAMSGGVDSSVVAAMLAAQGYDVIGVTLQLYDHGAALAKKGACCAGQDIHDARRVAE 89
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
++L + ++V + D L T VP
Sbjct: 90 RIGFPHYVLDY-------ENKFRESVIEEFADAYLAGATPVP 124
>gi|262306085|gb|ACY45635.1| gln amidotransferase [Orchesella imitari]
Length = 196
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
K L+L SGG DS+ C + R D++ + D G
Sbjct: 42 KHHKVLMLLSGGVDSTVCAALLKKALREDQIIAVHVDNG 80
>gi|224418410|ref|ZP_03656416.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
gi|253827728|ref|ZP_04870613.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
gi|313141940|ref|ZP_07804133.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
gi|253511134|gb|EES89793.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
gi|313130971|gb|EFR48588.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
Length = 325
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 16/34 (47%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + D V L FD G
Sbjct: 2 KALALFSGGLDSLLAIKIIKDMGIEVLALHFDIG 35
>gi|307300497|ref|ZP_07580277.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sinorhizobium meliloti BL225C]
gi|307318362|ref|ZP_07597797.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sinorhizobium meliloti AK83]
gi|306896044|gb|EFN26795.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sinorhizobium meliloti AK83]
gi|306904663|gb|EFN35247.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sinorhizobium meliloti BL225C]
Length = 398
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 50/193 (25%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y V C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TIGIPHYVLD---YEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGA 130
Query: 129 TNIVIGV-----------CETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
+ G + Y R ++ + PL L
Sbjct: 131 DALATGHYIRSRPSPKPRYAGQRALY---RPADAERDQSYFLFATTQEQIDYLRFPLGGL 187
Query: 176 KKYETWKLAQDIG 188
K ET LA+++G
Sbjct: 188 PKSETRALAEEMG 200
>gi|296535629|ref|ZP_06897808.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseomonas cervicalis ATCC 49957]
gi|296264053|gb|EFH10499.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 4/126 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V + Y +E + C + I +
Sbjct: 2 RIVVAMSGGVDSSVVAGLLKEQGHEVIGATLQLYDHGAAIEKKGACCAGQDIHDARDVAD 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ ++ A P V + LA LG
Sbjct: 62 RLGIPHYVLDR---ERRFRDAVIEDFAEAYARGETPIPCVRCNQTVKFQDLVELARDLGA 118
Query: 129 TNIVIG 134
+ G
Sbjct: 119 DALATG 124
>gi|296272287|ref|YP_003654918.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Arcobacter nitrofigilis DSM 7299]
gi|296096462|gb|ADG92412.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Arcobacter nitrofigilis DSM 7299]
Length = 346
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 51/192 (26%), Gaps = 26/192 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + ++ SGG DSS VE + R +K +E +
Sbjct: 1 MSEIKKVMVGMSGGIDSSVTAYMLQKEGYEVEGVYLKLHNRTD-------GYHEKNLEYI 53
Query: 65 PKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG HIL LA + + PN V I A
Sbjct: 54 EDVAAFLGIKYHILDLADKFTAEVYDYFVDS---YLEGTTPNPCVKCNKQIKFGAMLDFA 110
Query: 124 YRLGITNIVIGVCE-TDYSGYPDCRHDTIRAIETAINLGME-SHVTVHT-PLMWLK---- 176
G + + G TD A + + S V P M
Sbjct: 111 KEHGASYLATGHYAKTDG-------EFFYEADDKTKDQSYFLSQVPKEALPFMMFPLSTY 163
Query: 177 -KYETWKLAQDI 187
K + K ++
Sbjct: 164 KKEDIVKFGAEL 175
>gi|156844405|ref|XP_001645265.1| hypothetical protein Kpol_1037p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156115925|gb|EDO17407.1| hypothetical protein Kpol_1037p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 420
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W L++ V + GQ + + E KI
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFMANVGQ--EEDFEAAKEKALKIGA 55
>gi|238791416|ref|ZP_04635054.1| Thiamine biosynthesis protein thiI [Yersinia intermedia ATCC 29909]
gi|238729032|gb|EEQ20548.1| Thiamine biosynthesis protein thiI [Yersinia intermedia ATCC 29909]
Length = 483
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 174 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 227
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K++D + V R + + A+ +A
Sbjct: 228 LWSRFGSSHRVRFVAIDFEPVVG------EILEKVEDGQMG--VVLKR--MMVRAASQVA 277
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 278 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINL 328
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 329 ARHIGTEDF 337
>gi|330447769|ref|ZP_08311417.1| galactosyl transferase, GDP-mannosepyrophosphorylase,
phosphomannomutase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491960|dbj|GAA05914.1| galactosyl transferase, GDP-mannosepyrophosphorylase,
phosphomannomutase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 562
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
A+ SGG DS ++ L R ++E L+F Y QR++ E+ +
Sbjct: 238 AVSTLSGGLDSRVIVAELLKRGVQLECLNFSY-QRSQDEVYAEAFAQLH 285
>gi|156365939|ref|XP_001626899.1| predicted protein [Nematostella vectensis]
gi|156213792|gb|EDO34799.1| predicted protein [Nematostella vectensis]
Length = 701
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 63/214 (29%), Gaps = 51/214 (23%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG----QRNKVELECRLCVRKKIV 61
L+L SGG DS+ C + DRV + D G Q + E C+ ++
Sbjct: 244 NHKVLVLVSGGVDSTVCAALLHKALGPDRVVAVHIDNGFMRKQESMQVEESLKCLGLRLK 303
Query: 62 ELMPKWKDSLGEDHI--------LPLAILGDISHSSLTKNVAMKIQDNNLP--NTFV--- 108
L ++ G I + + ++ S + I D + N V
Sbjct: 304 VLNAGFQFYNGSTVISGRKDQIAVKKQLTKTLNQVSDPEEKRKIIGDTFMKVANDVVKEL 363
Query: 109 ---PGRNIIFLVFA---------ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET 156
P N+ FL A+ I +T+
Sbjct: 364 ELDP--NLTFLAQGTLRPDLIESASHIASGQADAIKTHHNDTE----------------- 404
Query: 157 AINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+ + V PL K E +L ++G
Sbjct: 405 -LVRVLREKGRVVEPLKDFHKDEVRQLGLELGLP 437
>gi|90579840|ref|ZP_01235648.1| thiamine biosynthesis protein ThiI [Vibrio angustum S14]
gi|90438725|gb|EAS63908.1| thiamine biosynthesis protein ThiI [Vibrio angustum S14]
Length = 483
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + + K+ D + + R +F+ A +A
Sbjct: 227 IWNKFGSSAKVKFIAIDFEPVVG------EILEKVDDGQMG--VILKR--MFMRAAGKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + ++ + + PL+ K + +
Sbjct: 277 DKFGIEALVTGEALGQVSS---------QTLTNLRHIDGVTDSLILRPLINWDKEDIINV 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|45358795|ref|NP_988352.1| PP-loop domain-containing protein [Methanococcus maripaludis S2]
gi|45047661|emb|CAF30788.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 296
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIV 61
++ K +++ SGG+DS+ L+ A D V + F +K + KK+
Sbjct: 33 ELNLKDEKIIVMLSGGKDSAVSLAIAKDLGLNVHLCVHF----VHKWSWDISTNEAKKLA 88
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHS 88
+ L G S
Sbjct: 89 DRFNVPIIFPDITEELAKKTQGAKGKS 115
>gi|83951896|ref|ZP_00960628.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseovarius nubinhibens ISM]
gi|83836902|gb|EAP76199.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseovarius nubinhibens ISM]
Length = 380
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 7/104 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + + V ++ Y + + C I +
Sbjct: 17 SETRVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 76
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++ ++L +I ++ A P VP
Sbjct: 77 VAEEMGFPHYVLD---YENIFQDAVIDEFADSYLAGATP---VP 114
>gi|253828114|ref|ZP_04870999.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Helicobacter canadensis MIT 98-5491]
gi|253511520|gb|EES90179.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Helicobacter canadensis MIT 98-5491]
Length = 349
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 41/128 (32%), Gaps = 14/128 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPK 66
LLL SGG DSS C + V + Y + + E + +K E +
Sbjct: 2 KKVLLLMSGGVDSSYCAYLLQKQGYSVYGI---YLKLHDKEEKHDYYTRNIQKCAESLNI 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E + ++ D S K + PN + A LA L
Sbjct: 59 PYQIVDERELFKKSVY-DYFVDSYKKGLTPNPCAMCNPN--------VKFNIAFKLAKDL 109
Query: 127 GITNIVIG 134
G + G
Sbjct: 110 GCEFVATG 117
>gi|114627208|ref|XP_001165570.1| PREDICTED: argininosuccinate synthase [Pan troglodytes]
Length = 452
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
D + S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 39 DAMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 88
>gi|78776227|ref|YP_392542.1| thiamine biosynthesis protein:ExsB [Sulfurimonas denitrificans
DSM 1251]
gi|78496767|gb|ABB43307.1| Thiamine biosynthesis protein:ExsB [Sulfurimonas denitrificans
DSM 1251]
Length = 326
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A+ LFSGG DS+ L +D+ V ++ + G
Sbjct: 2 KAIALFSGGLDSTLALKLIIDQGIEVLAVNINTG 35
>gi|313681859|ref|YP_004059597.1| argininosuccinate synthase [Sulfuricurvum kujiense DSM 16994]
gi|313154719|gb|ADR33397.1| argininosuccinate synthase [Sulfuricurvum kujiense DSM 16994]
Length = 405
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+KK ++L +SGG D+S L W D + V T + D GQ +VE + I
Sbjct: 1 MKKEVKKVVLAYSGGLDTSVILKWLQDEYNCEVVTFTADIGQGEEVEPARAKAISLGIKP 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 ENIYIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|302348658|ref|YP_003816296.1| GMP synthase (glutamine-hydrolyzing) [Acidilobus saccharovorans
345-15]
gi|302329070|gb|ADL19265.1| GMP synthase (glutamine-hydrolyzing) [Acidilobus saccharovorans
345-15]
Length = 517
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
+ I + A++ SGG DS+T A DR + ++G + E E L K
Sbjct: 215 VRSQIPREDKAIVAVSGGVDSTTAAVIAKRALGDRAVVVFINHGLLREGEAEEVLSALKS 274
Query: 60 I 60
+
Sbjct: 275 L 275
>gi|296127467|ref|YP_003634719.1| thiamine biosynthesis protein [Brachyspira murdochii DSM 12563]
gi|296019283|gb|ADG72520.1| thiamine biosynthesis protein [Brachyspira murdochii DSM 12563]
Length = 352
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 41/137 (29%), Gaps = 22/137 (16%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-----RKK 59
+ K A+LL SGG DS + V L F G V E L + KK
Sbjct: 1 MNKKAKAILLLSGGLDSMLVGAILKRENIDVLALRFVTGLEYSVIKEELLNIYNEDPAKK 60
Query: 60 IVELMPKWKDSLGEDHI-LPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ + + + L + + S++ + I + L
Sbjct: 61 AADFLNIPIRFVSLKDVYLDMFLNPKYGYGSAINPCLDCHI---------------LMLK 105
Query: 118 FAATLAYRLGITNIVIG 134
A + G I G
Sbjct: 106 TAKKIMEEEGFDFIATG 122
>gi|13626768|sp|O26806|GUAAB_METTH RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
Length = 308
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 42/194 (21%)
Query: 8 APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++ SGG DSS A D + + D+G + E VRK E +
Sbjct: 21 NEKAIIALSGGVDSSVASVLAGRAIGDNLTAVFVDHGLLREGE---AEYVRKTFSERLNF 77
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
E+ L ++ + + I GR +F+ +A +
Sbjct: 78 RYIDASEE------FLKELEGVTDPEEKRKII-----------GR--VFIEVFERVAEEI 118
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRA-------IETAINLGMESHVTVHTPLMWLKKYE 179
G +V G D I + A+ G+ + + P+ L K E
Sbjct: 119 GARYLVQGTIA----------PDWIESEGQIKSHHNVALPHGLV--LEIVEPIRELYKDE 166
Query: 180 TWKLAQDIGGQDLV 193
++ ++G +
Sbjct: 167 VREIGLELGLPREM 180
>gi|15678737|ref|NP_275853.1| GMP synthase subunit B [Methanothermobacter thermautotrophicus str.
Delta H]
gi|2621797|gb|AAB85215.1| GMP synthetase, subunit B [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 311
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 42/194 (21%)
Query: 8 APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++ SGG DSS A D + + D+G + E VRK E +
Sbjct: 24 NEKAIIALSGGVDSSVASVLAGRAIGDNLTAVFVDHGLLREGE---AEYVRKTFSERLNF 80
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
E+ L ++ + + I GR +F+ +A +
Sbjct: 81 RYIDASEE------FLKELEGVTDPEEKRKII-----------GR--VFIEVFERVAEEI 121
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRA-------IETAINLGMESHVTVHTPLMWLKKYE 179
G +V G D I + A+ G+ + + P+ L K E
Sbjct: 122 GARYLVQGTIA----------PDWIESEGQIKSHHNVALPHGLV--LEIVEPIRELYKDE 169
Query: 180 TWKLAQDIGGQDLV 193
++ ++G +
Sbjct: 170 VREIGLELGLPREM 183
>gi|71021577|ref|XP_761019.1| hypothetical protein UM04872.1 [Ustilago maydis 521]
gi|46100939|gb|EAK86172.1| hypothetical protein UM04872.1 [Ustilago maydis 521]
Length = 426
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL +SGG D+ST L+W +D V D GQ E + K + +
Sbjct: 7 KVLLAYSGGLDTSTILAWLIDEGYDVIAFMADVGQ----EEDFEAARSKALKCGAKDFIL 62
Query: 70 SLGEDHILPLAILGDISHSSLTKNV 94
+ + I + +++ ++V
Sbjct: 63 ADLRREFIEELIFPAVQANAIYEDV 87
>gi|167527119|ref|XP_001747892.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773641|gb|EDQ87279.1| predicted protein [Monosiga brevicollis MX1]
Length = 666
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYG 43
AL+L SGG DSS C + +RV L D G
Sbjct: 219 KKALVLVSGGVDSSVCAALLNKAVGHERVVALHIDNG 255
>gi|18977888|ref|NP_579245.1| GMP synthase subunit B [Pyrococcus furiosus DSM 3638]
gi|23821600|sp|Q8U0R8|GUAAB_PYRFU RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|18893648|gb|AAL81640.1| GMP synthase [Pyrococcus furiosus DSM 3638]
Length = 313
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 29/187 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSST A DR+ + + G K E E V K +
Sbjct: 27 KAIIALSGGVDSSTAAVLAHRAIGDRLHAVFVNTGFLRKGEPE---FVIKTFRDEFGMNL 83
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + + + GR +F+ +A +G
Sbjct: 84 HYVDAQ---DRFFAALKGVTDPEEKRKII------------GR--VFIEVFEEVAKDIGA 126
Query: 129 TNIVIGVCETDYSGYPDC--RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ G PD I++ L + ++ + PL L K E +LA++
Sbjct: 127 EYLIQGTIA------PDWIESQGKIKSHHNVGGLPEKLNLKIIEPLRDLYKDEVRQLAKE 180
Query: 187 IGGQDLV 193
+G + +
Sbjct: 181 LGLPEKI 187
>gi|119719237|ref|YP_919732.1| thiamine biosynthesis protein ThiI [Thermofilum pendens Hrk 5]
gi|119524357|gb|ABL77729.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermofilum
pendens Hrk 5]
Length = 484
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 58/185 (31%), Gaps = 25/185 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS+ + L R V L + L L V KK+ +
Sbjct: 170 PVGSEGKVLALISGGYDSAVAAWYMLKRGAEVHYLYCNMAGDLTKSL--VLSVAKKLAD- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
S G L +A + K V R A +A
Sbjct: 227 ----SWSYGYKPRLYVADFSPLLRELRAKVAPELFG-------VVLKR--YMYRVAEAIA 273
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+G IV G S + +E + + ++ PL+ K E
Sbjct: 274 GRIGAIGIVTGESLGQVSS---------QTLENLYVASQATSMPIYRPLIGFDKEEIISK 324
Query: 184 AQDIG 188
+++IG
Sbjct: 325 SKEIG 329
>gi|325302866|tpg|DAA34469.1| TPA_exp: GMP synthase [Amblyomma variegatum]
Length = 293
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 69/210 (32%), Gaps = 42/210 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELE------CRLCVRKKIV 61
L+L SGG DS+ C + R D+V L D G K E L +R ++V
Sbjct: 56 KVLMLVSGGVDSTVCAALLHKALREDQVIALHIDNGFMRKDESAQVEQSLKHLGLRLRVV 115
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA- 120
+ ++ + I P + L + + + + +T F+ A
Sbjct: 116 DASHQFYNGTTTVPIDPKDPQRKRTTKMLCQTAHPEEKRKIIGDT--------FMRVANE 167
Query: 121 TLAY-RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA----------------INLGME 163
+A +L ++ +G R D I + + +
Sbjct: 168 VIAELQLNPDDVFLGQGTL--------RPDLIESASHLASGQADAIKTHHNDTDLVRQLR 219
Query: 164 SHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
+ V PL K E L +D+G +
Sbjct: 220 ARGRVVEPLKDFHKDEVRALGRDLGLAAEL 249
>gi|146297250|ref|YP_001181021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|205814264|sp|A4XLP5|MNMA_CALS8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|145410826|gb|ABP67830.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 361
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 14/44 (31%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL 50
L+ SGG DSS + + V + Q E
Sbjct: 1 MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATMQIWQNECGEE 44
>gi|325955195|ref|YP_004238855.1| tRNA-specific 2-thiouridylase mnmA [Weeksella virosa DSM 16922]
gi|323437813|gb|ADX68277.1| tRNA-specific 2-thiouridylase mnmA [Weeksella virosa DSM 16922]
Length = 397
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 40/130 (30%), Gaps = 11/130 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V L V LE + + + +
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLKEQGYEVIGLFMRNWNDASVTLEDECPWIEDSADALLTAE 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNI---IFLVFAATLAY 124
++ ++ + + + + PN V R I +FL A
Sbjct: 62 KLNIPFQVIDMS---ASYKERIVDYMFAEYEQGRTPNPDVLCNREIKFDLFLKTAL---- 114
Query: 125 RLGITNIVIG 134
LG + G
Sbjct: 115 ELGADYVATG 124
>gi|237753391|ref|ZP_04583871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter winghamensis ATCC BAA-430]
gi|229375658|gb|EEO25749.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter winghamensis ATCC BAA-430]
Length = 347
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 14/128 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPK 66
LLL SGG DSS C + V + Y + + E + VR +K + +
Sbjct: 2 KKVLLLMSGGVDSSYCAYLLQKQGYLVYGV---YLKLHDKEEKHAYFVRNIEKCAKHLNI 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E + + S + N FV A LA ++
Sbjct: 59 EYSIIDERELFKEKVYDYFVESYKKGLTPNPCA---MCNPFVKF------GIAFDLADKM 109
Query: 127 GITNIVIG 134
G + G
Sbjct: 110 GFDYVATG 117
>gi|254519285|ref|ZP_05131341.1| tRNA-specific 2-thiouridylase mnmA [Clostridium sp. 7_2_43FAA]
gi|226913034|gb|EEH98235.1| tRNA-specific 2-thiouridylase mnmA [Clostridium sp. 7_2_43FAA]
Length = 360
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL---SFD 41
++ SGG DSS ++ V + FD
Sbjct: 1 MKKKVVVGMSGGVDSSVAAYLLKEQGYEVIGVTMKHFD 38
>gi|108805668|ref|YP_645605.1| argininosuccinate synthase [Rubrobacter xylanophilus DSM 9941]
gi|119361318|sp|Q1AS35|ASSY_RUBXD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|108766911|gb|ABG05793.1| argininosuccinate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 409
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +L +SGG D+S CL W ++ L D GQ E +R E+
Sbjct: 1 MLGGKKVVLAYSGGLDTSVCLKWFEEQGAEPYALYLDLGQGEPAEDVREKALRIGAREVF 60
>gi|255263925|ref|ZP_05343267.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thalassiobium sp. R2A62]
gi|255106260|gb|EET48934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thalassiobium sp. R2A62]
Length = 378
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 9/102 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C I + +
Sbjct: 20 RVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKQGACCAGLDIHDARRVAQ 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
+ ++L ++ + V + D+ L T VP
Sbjct: 80 EMGFPHYVLDY-------ENTFKEAVIDEFADSYLAGATPVP 114
>gi|62179036|ref|YP_215453.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|81309775|sp|Q57SD9|THII_SALCH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|62126669|gb|AAX64372.1| exonuclease VII, small subunit [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322713497|gb|EFZ05068.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 482
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKGHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|302392042|ref|YP_003827862.1| thiamine biosynthesis/tRNA modification protein ThiI [Acetohalobium
arabaticum DSM 5501]
gi|302204119|gb|ADL12797.1| thiamine biosynthesis/tRNA modification protein ThiI [Acetohalobium
arabaticum DSM 5501]
Length = 391
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 66/191 (34%), Gaps = 24/191 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A LL SGG DS A+ R + + F + ++K+++L +
Sbjct: 179 KAGLLLSGGIDSPVAGWMAMKRGVEIMPIYF-----HTPPFTS-SRAKEKVLDLSRVLAE 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G + + ++ +L + K+ T + R + + A +
Sbjct: 233 YAGGSLQVRIVPFTEVQK-ALNEKCPEKLL------TVIMRR--MMMRIAERITNNNEGK 283
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + T+ ++ + + V PL+ L K E A++IG
Sbjct: 284 ALITGESIGQVAS------QTLESMNVTNAVA---QMPVFRPLIGLDKNEIKARAKEIGT 334
Query: 190 QDLVNLILEES 200
++ ++
Sbjct: 335 YEISIQPYDDC 345
>gi|24638313|sp|Q8U9M5|MNMA_AGRT5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 398
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 55/197 (27%), Gaps = 28/197 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y V C + I + +
Sbjct: 14 RIVVAMSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TLGIPHYVLD---YEARFRETVINPFAEAYAMGETPIPCVACNQTVKFADLLATAQELGA 130
Query: 129 TNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHT-----------P 171
+ G Y R + + RA+ I+ + + P
Sbjct: 131 DALATGH-------YIRSRPNPVSGQPGRRALYRPIDSDRDQSWFLFATTQEQIDYLRFP 183
Query: 172 LMWLKKYETWKLAQDIG 188
L L K ET LA+++G
Sbjct: 184 LGGLSKAETRALAEEMG 200
>gi|238879556|gb|EEQ43194.1| argininosuccinate synthase [Candida albicans WO-1]
Length = 416
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ K + L +SGG D+S L+W L++ V + GQ E + +
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQEEDFEEAEKKALA 52
>gi|241957900|ref|XP_002421669.1| arginosuccinate synthase, putative [Candida dubliniensis CD36]
gi|223645014|emb|CAX39607.1| arginosuccinate synthase, putative [Candida dubliniensis CD36]
Length = 416
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ K + L +SGG D+S L+W L++ V + GQ E + +
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQEEDFEEAEKKALA 52
>gi|46199840|ref|YP_005507.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB27]
gi|55981869|ref|YP_145166.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB8]
gi|46197467|gb|AAS81880.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB27]
gi|55773282|dbj|BAD71723.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB8]
Length = 281
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 63/188 (33%), Gaps = 38/188 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++ SGG DS+T L+ A+ +RV L ++ + E
Sbjct: 38 EKAIVAVSGGVDSATTLALAVRALGAERVHALFLP----HRESSPTSREHAYLVAETFGV 93
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-AYR 125
+ + ++ +++LT ++ + N + R I+ + A
Sbjct: 94 ALEEVDITPMVE-------GYAALTPDLTPHRKGNVMAR----ARMIVLFDKSEAYRALP 142
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG G GY G ++ PL L K + W+LA+
Sbjct: 143 LG-----TGNKTERLFGY------FT-------WHGDDTPP--VNPLGDLYKTQVWRLAE 182
Query: 186 DIGGQDLV 193
+G + V
Sbjct: 183 HLGVPEEV 190
>gi|326470757|gb|EGD94766.1| argininosuccinate synthase [Trichophyton tonsurans CBS 112818]
Length = 412
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + LL +SGG D+S L+W L++ V D GQ + R + +L
Sbjct: 1 MAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQAEDFKEAERKALAVGAKKL- 59
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ L ++ + L ++ + + A + +
Sbjct: 60 --VVEDLKKEFVEDLCFKAIQCNTDTSSDDARPVIARAM 96
>gi|149915230|ref|ZP_01903758.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter sp. AzwK-3b]
gi|149810951|gb|EDM70790.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter sp. AzwK-3b]
Length = 379
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C I + +
Sbjct: 20 RVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
D ++L +I ++ A P VP
Sbjct: 80 DMGFPHYVLD---YENIFRDAVIDEFADSYLAGATP---VP 114
>gi|319957080|ref|YP_004168343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitratifractor salsuginis DSM 16511]
gi|319419484|gb|ADV46594.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitratifractor salsuginis DSM 16511]
Length = 340
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 40/129 (31%), Gaps = 14/129 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DS+ V + Y + + E R K +
Sbjct: 3 EKKVLVGMSGGVDSTVAALLLQKEGYEVVGV---YMKLHDNEAYHRENYAK-----ARRV 54
Query: 68 KDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYR 125
+ LG + H L ++ + + + PN V R I F A
Sbjct: 55 GEYLGVEVHFLDISGD---FRQEVYDYFVEEYRTGRTPNPCVVCNRQIKFGRM-LEFADS 110
Query: 126 LGITNIVIG 134
LGI + G
Sbjct: 111 LGIEKVATG 119
>gi|269103243|ref|ZP_06155940.1| thiamine biosynthesis protein ThiI [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163141|gb|EEZ41637.1| thiamine biosynthesis protein ThiI [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 482
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHF 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + V R +F+ A +A
Sbjct: 227 LWNKYGSSAKVKFIAVDFEPVVA------EILEKVDDGQMG--VVLKR--MFMRAAGQVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
GI +V G S + + ++ + + PL+ K + +
Sbjct: 277 EHFGIQALVTGEALGQVSS---------QTLTNLRHIDGVTDTLILRPLINWDKEDIINM 327
Query: 184 AQDIGGQDL 192
A+ IG +D
Sbjct: 328 ARHIGTEDF 336
>gi|166031239|ref|ZP_02234068.1| hypothetical protein DORFOR_00926 [Dorea formicigenerans ATCC
27755]
gi|166029086|gb|EDR47843.1| hypothetical protein DORFOR_00926 [Dorea formicigenerans ATCC
27755]
Length = 393
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +A+LL SGG DS R +E F + ++K+V+L
Sbjct: 176 PVGTNGNAMLLLSGGIDSPVAGYMVSKRGVGLEATYF-----HAPPYTSE-RAKQKVVDL 229
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G + H++ + + + I + A
Sbjct: 230 AKIVARYSGPIKLHVVNFTDIQLYIYDKCPHDELTIIMRRY------------MMRIAEE 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A R G +V G + + +++ + V+ PL+ K +
Sbjct: 278 FARRDGCLGLVTGESIGQVAS---------QTMQSLAATNDVCTMPVYRPLIGFDKQDIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ I + L E+
Sbjct: 329 DVAEKIDTYETSILPFEDC 347
>gi|37521616|ref|NP_924993.1| hypothetical protein gll2047 [Gloeobacter violaceus PCC 7421]
gi|35212614|dbj|BAC89988.1| gll2047 [Gloeobacter violaceus PCC 7421]
Length = 278
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 63/189 (33%), Gaps = 39/189 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
DI L+ +SGG DS+ A D DR ++ + + +
Sbjct: 11 DIFASLDRVLVAYSGGVDSTLVAKVAFDALGDRALAVT----------AASPSLMAEDLE 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E + + I+ L D +++S N + L VP
Sbjct: 61 EAVRQAAQIGIAHEIIETTELDDPNYTSNPANR-CYFCKSELHGRLVP------------ 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYE 179
LA GI +V G D Y R + A G + +PL+ L K E
Sbjct: 108 LATARGIEVVVDGANLDDLGDY---RPGF----QAAREKG------IRSPLIEVGLTKLE 154
Query: 180 TWKLAQDIG 188
+L++ +G
Sbjct: 155 VRELSRGLG 163
>gi|186685498|ref|YP_001868694.1| tRNA-specific 2-thiouridylase MnmA [Nostoc punctiforme PCC 73102]
gi|205816898|sp|B2J5L9|MNMA_NOSP7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|186467950|gb|ACC83751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nostoc punctiforme PCC 73102]
Length = 351
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSST + + V L+
Sbjct: 2 KKVVVGLSGGVDSSTAAAILHHQGYEVIGLT 32
>gi|224419182|ref|ZP_03657188.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter canadensis MIT
98-5491]
Length = 190
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 41/128 (32%), Gaps = 14/128 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPK 66
LLL SGG DSS C + V + Y + + E + +K E +
Sbjct: 2 KKVLLLMSGGVDSSYCAYLLQKQGYSVYGI---YLKLHDKEEKHDYYTRNIQKCAESLNI 58
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ E + ++ D S K + PN + A LA L
Sbjct: 59 PYQIVDERELFKKSVY-DYFVDSYKKGLTPNPCAMCNPN--------VKFNIAFKLAKDL 109
Query: 127 GITNIVIG 134
G + G
Sbjct: 110 GCEFVATG 117
>gi|70608041|ref|YP_256911.1| thiamine biosynthesis protein [Sulfolobus acidocaldarius DSM 639]
gi|76363448|sp|Q4J6G3|THII_SULAC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|68568689|gb|AAY81618.1| thiamine biosynthesis protein [Sulfolobus acidocaldarius DSM 639]
Length = 369
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 27/189 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ++LFSGG DS + R R L+F+ G + + +L K V++
Sbjct: 162 PVGSTGKTVVLFSGGFDSPVATWMLMKRGVRPILLNFELGGKVQRDL------VLKEVDV 215
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ +W + + + + + +S N ++ L I A LA
Sbjct: 216 LKQWSSNND----INVYFINGLDVTSKLVNAEPSLRILLLKR--------IMYNTARVLA 263
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+L +I G + S + + + + V PL+ K E ++
Sbjct: 264 NKLRAYSITTGESLSQVSS---------QTMINLYVTEYDIDLPVFRPLIGFDKEEIIQM 314
Query: 184 AQDIGGQDL 192
++ IG +
Sbjct: 315 SRKIGTFEY 323
>gi|296101544|ref|YP_003611690.1| hypothetical protein ECL_01180 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056003|gb|ADF60741.1| hypothetical protein ECL_01180 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA++IG +D
Sbjct: 326 DLAREIGTEDFART 339
>gi|288936858|ref|YP_003440917.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
variicola At-22]
gi|288891567|gb|ADC59885.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
variicola At-22]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA++IG +D
Sbjct: 326 DLAREIGTEDFART 339
>gi|262042446|ref|ZP_06015606.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040221|gb|EEW41332.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA++IG +D
Sbjct: 326 DLAREIGTEDFART 339
>gi|206579645|ref|YP_002240109.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
pneumoniae 342]
gi|290510086|ref|ZP_06549456.1| thiamine biosynthesis protein thiI [Klebsiella sp. 1_1_55]
gi|226726951|sp|B5Y0W8|THII_KLEP3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|206568703|gb|ACI10479.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
pneumoniae 342]
gi|289776802|gb|EFD84800.1| thiamine biosynthesis protein thiI [Klebsiella sp. 1_1_55]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA++IG +D
Sbjct: 326 DLAREIGTEDFART 339
>gi|163741163|ref|ZP_02148555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Phaeobacter gallaeciensis 2.10]
gi|161385516|gb|EDQ09893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Phaeobacter gallaeciensis 2.10]
Length = 381
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + D V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAHLADEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 82 ERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|152968948|ref|YP_001334057.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893360|ref|YP_002918094.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae
NTUH-K2044]
gi|330006918|ref|ZP_08305790.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
sp. MS 92-3]
gi|189030634|sp|A6T5F6|THII_KLEP7 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|150953797|gb|ABR75827.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238545676|dbj|BAH62027.1| thiamine biosynthesis protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328535672|gb|EGF62121.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
sp. MS 92-3]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA++IG +D
Sbjct: 326 DLAREIGTEDFART 339
>gi|78777570|ref|YP_393885.1| argininosuccinate synthase [Sulfurimonas denitrificans DSM 1251]
gi|119361342|sp|Q30QT1|ASSY_SULDN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|78498110|gb|ABB44650.1| argininosuccinate synthase [Sulfurimonas denitrificans DSM 1251]
Length = 404
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K+ ++L +SGG D+S L W D + V T + D GQ +VE + I
Sbjct: 1 MKREVKKVVLAYSGGLDTSVILKWLQDEYKCEVVTFTADIGQGEEVEPARAKALALGIKP 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ +D++ P+ I ++
Sbjct: 61 ENIFIDDLREEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|307944132|ref|ZP_07659473.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseibium sp. TrichSKD4]
gi|307772478|gb|EFO31698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseibium sp. TrichSKD4]
Length = 390
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y V C I + +
Sbjct: 15 RVVVAMSGGVDSSVVAALMKEEGYDVIGVTLQLYDHGAAVSRAKSCCAGVDIHDARRAAE 74
Query: 69 DSLGEDHILP 78
++L
Sbjct: 75 KIGIPHYVLD 84
>gi|163736308|ref|ZP_02143727.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Phaeobacter gallaeciensis BS107]
gi|161390178|gb|EDQ14528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Phaeobacter gallaeciensis BS107]
Length = 381
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + D V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAHLADEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 82 ERGFPHYVLD---YENIFKDAVIDEFADSYLAGATP---VP 116
>gi|322513968|ref|ZP_08067043.1| thiamine biosynthesis protein ThiI [Actinobacillus ureae ATCC
25976]
gi|322120194|gb|EFX92152.1| thiamine biosynthesis protein ThiI [Actinobacillus ureae ATCC
25976]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|307259409|ref|ZP_07541134.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306866345|gb|EFM98208.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|307257127|ref|ZP_07538899.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864289|gb|EFM96200.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|307250326|ref|ZP_07532276.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306857653|gb|EFM89759.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|307245992|ref|ZP_07528074.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254971|ref|ZP_07536790.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306852927|gb|EFM85150.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862089|gb|EFM94064.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|303250178|ref|ZP_07336380.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252710|ref|ZP_07534601.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651241|gb|EFL81395.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859742|gb|EFM91764.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|190571202|ref|YP_001975560.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Wolbachia endosymbiont of Culex quinquefasciatus Pel]
gi|213018602|ref|ZP_03334410.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Wolbachia endosymbiont of Culex quinquefasciatus JHB]
gi|229487430|sp|B3CLZ0|MNMA_WOLPP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|190357474|emb|CAQ54908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Wolbachia endosymbiont of Culex quinquefasciatus Pel]
gi|212995553|gb|EEB56193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Wolbachia endosymbiont of Culex quinquefasciatus JHB]
Length = 368
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 17/132 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSS + + V ++ YG + C + I +
Sbjct: 20 KAIVAMSGGVDSSVAAALLYNLGYEVIGVTLQLYGSDGNA-RKGACCAGQDIYD-AKYVA 77
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATL 122
+S+G H + +I + ++ A P N V R+++ +
Sbjct: 78 ESVGFPHYI--LNYEEIFKKEVIEDFANTYMRGETPIPCVRCNQTVKFRDLLQVT----- 130
Query: 123 AYRLGITNIVIG 134
LG +V G
Sbjct: 131 -KNLGADVLVTG 141
>gi|190150401|ref|YP_001968926.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303253350|ref|ZP_07339499.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307249157|ref|ZP_07531162.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307261555|ref|ZP_07543223.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307263744|ref|ZP_07545350.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915532|gb|ACE61784.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648032|gb|EFL78239.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854327|gb|EFM86525.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306868678|gb|EFN00487.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870865|gb|EFN02603.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|171057122|ref|YP_001789471.1| tRNA-specific 2-thiouridylase MnmA [Leptothrix cholodnii SP-6]
gi|205816874|sp|B1XX60|MNMA_LEPCP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|170774567|gb|ACB32706.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptothrix cholodnii SP-6]
Length = 380
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + ++ SGG DS+ + V +
Sbjct: 1 MNTQLPPKQRIVVGLSGGVDSAVSAWLLKQQGHEVVAI 38
>gi|165976497|ref|YP_001652090.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876598|gb|ABY69646.1| thiamine biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 465
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 156 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 207
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 208 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 259
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 260 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 310
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 311 AKEIGTDDI 319
>gi|126208546|ref|YP_001053771.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
L20]
gi|126097338|gb|ABN74166.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 482
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|46143459|ref|ZP_00135196.2| COG0301: Thiamine biosynthesis ATP pyrophosphatase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 471
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 162 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 213
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 214 YHIWSRYSTSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 265
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 266 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 316
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 317 AKEIGTDDI 325
>gi|329957309|ref|ZP_08297829.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides clarus YIT 12056]
gi|328523022|gb|EGF50125.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides clarus YIT 12056]
Length = 388
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 24/139 (17%)
Query: 1 MN--DIIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF-DYGQRNKVELECRLCV 56
MN ++ K L+ SGG DS+ TCL ++ + L+ +G LE R
Sbjct: 29 MNIREMNKIEKRVLVGMSGGIDSTATCL-MLQEQGYEIIGLTMWVWG---DEPLEARQLA 84
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF- 115
R +E H+ + + + +N + + PN V N +F
Sbjct: 85 RSMGIE-----------HHVADE---REAFRNVIVRNFIDEYRQGRTPNPCVMC-NPLFK 129
Query: 116 LVFAATLAYRLGITNIVIG 134
A +L I G
Sbjct: 130 FRIFTEWADKLNCRYIATG 148
>gi|262306003|gb|ACY45594.1| gln amidotransferase [Achelia echinata]
Length = 197
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG-QRNKVELECRLCVRKKIVELM 64
+ L+L SGG DS+ C + + ++V + D G R + + +RK + L+
Sbjct: 43 SSKVLVLVSGGVDSTVCAALLHKALQPEQVIAVHIDNGFMRKEESKQVEESLRKLGLHLL 102
Query: 65 PKWKDSL 71
L
Sbjct: 103 VVNAAHL 109
>gi|119475106|ref|ZP_01615459.1| thiamine biosynthesis protein ThiI [marine gamma proteobacterium
HTCC2143]
gi|119451309|gb|EAW32542.1| thiamine biosynthesis protein ThiI [marine gamma proteobacterium
HTCC2143]
Length = 448
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 59/190 (31%), Gaps = 45/190 (23%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
SA+ L SGG DS+ + R R F+ G R
Sbjct: 144 ESAVSLISGGFDSTVSTYMTMKRGMRTHFCFFNLGGR----------------------- 180
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNT------FVPGRNIIFLVFA 119
D + L + SS K V++ +D L N V R + L
Sbjct: 181 DHEVGVKEIALYLWMKYGASSRVKFVSVPFEDVVAEILKNVDDSQMGVVLKR--MMLRAG 238
Query: 120 ATLAYRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
+A L +V G S + + + + V PL+ K
Sbjct: 239 TEVAKNLRGQALVTGEAVAQVSS----------QTLTNLSVIDSVTETLVLRPLIVSDKE 288
Query: 179 ETWKLAQDIG 188
+ ++A++IG
Sbjct: 289 DIIRIAREIG 298
>gi|157803967|ref|YP_001492516.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia canadensis str.
McKiel]
gi|166235078|sp|A8EZE8|MNMA_RICCK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|157785230|gb|ABV73731.1| hypothetical protein A1E_04020 [Rickettsia canadensis str.
McKiel]
Length = 368
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K ++ SGG DS+ + + V ++ Y V + C +
Sbjct: 1 MINLGDKQSIIVVAMSGGVDSAAVAAMLHAQGYNVIGITLQLYDHGMAVGKKNACCAGQD 60
Query: 60 IVELMPKWKDSLGEDHILP 78
I + ++L
Sbjct: 61 IYDAKMVANKLGIPHYVLD 79
>gi|49475921|ref|YP_033962.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella henselae str. Houston-1]
gi|81647713|sp|Q6G2J9|MNMA_BARHE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|49238729|emb|CAF27985.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella henselae str. Houston-1]
Length = 409
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 34/132 (25%), Gaps = 10/132 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS V ++ Y C + I +
Sbjct: 13 ENSRIVVAMSGGVDSSVVAGLLKKEGYDVIGITLQLYDHGAATHRVGACCAGQDIEDARC 72
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRN-IIFLVFAATL 122
+ ++L + ++ A P VP N +
Sbjct: 73 VAETLGIPHYVLD---YEERFREAVIDPFAASYAHGETP---VPCIACNQTVKFADLLAT 126
Query: 123 AYRLGITNIVIG 134
A L + G
Sbjct: 127 ARELDADALATG 138
>gi|313905330|ref|ZP_07838696.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
cellulosolvens 6]
gi|313469800|gb|EFR65136.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
cellulosolvens 6]
Length = 396
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 41/205 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ SA LL SGG DS R +++ + F + +K +
Sbjct: 178 PVGSNGSAELLLSGGIDSPVAGWMIAKRGVQIDAVYF-----HAPPYTSERAKQKVVDLA 232
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ ++ + + I I + + + ++ + A
Sbjct: 233 KIVARYSGRMRLHIVNFTDIQLAIYEKCPHEELTIIMRRY-------------MMRIAEH 279
Query: 122 LAYRLGITNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
A + G ++ G +T +S + + V+ PL+
Sbjct: 280 FAEQDGALGLITGESIGQVASQTAHS---------------LLCTNAVCKLPVYRPLIGF 324
Query: 176 KKYETWKLAQDIGGQDLVNLILEES 200
K E +++Q I + L E+
Sbjct: 325 DKQEIIEISQKIDAYETSILPFEDC 349
>gi|323137322|ref|ZP_08072400.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylocystis sp. ATCC 49242]
gi|322397309|gb|EFX99832.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylocystis sp. ATCC 49242]
Length = 412
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 37/130 (28%), Gaps = 12/130 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V ++ Y + C + I +
Sbjct: 21 RVVVAMSGGVDSSVVAALLKEQGYDVVGVTLQLYDHGEATHRKGACCAGQDIQDARAVAA 80
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNIIFLVFAATL--AY 124
+L + A P VP N F+ FA A
Sbjct: 81 RLGIPHFVLD---YERRFREKVIDEFAASYASGETP---VPCVACNQ-FIKFADLFETAK 133
Query: 125 RLGITNIVIG 134
LG + G
Sbjct: 134 DLGAHVLATG 143
>gi|311280688|ref|YP_003942919.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterobacter
cloacae SCF1]
gi|308749883|gb|ADO49635.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterobacter
cloacae SCF1]
Length = 482
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S V PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLVLRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA++IG +D
Sbjct: 326 NLAREIGTEDFART 339
>gi|94499692|ref|ZP_01306229.1| thiamine biosynthesis protein ThiI [Oceanobacter sp. RED65]
gi|94428446|gb|EAT13419.1| thiamine biosynthesis protein ThiI [Oceanobacter sp. RED65]
Length = 483
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 41/188 (21%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
S L L SGG DS+ + R + L F+ G K++ + W
Sbjct: 177 QDSVLSLVSGGFDSNVASYLMMRRGMQTHYLFFNLGG------SAHEIGVKQVAHYL--W 228
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ + + I + S + + + V R + L + +A +G
Sbjct: 229 ENYSVSHGVKFITIPFEGVVSEILERIDNSYMG------VVLKR--MMLRAGSQIAESMG 280
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWLKKYE 179
I +V G +I + +++ + PL+ + K E
Sbjct: 281 IDALVTG-----------------ESIAQVSSQTLKNLKVIDGVTETLVLRPLITMDKPE 323
Query: 180 TWKLAQDI 187
++++I
Sbjct: 324 IINISREI 331
>gi|325295219|ref|YP_004281733.1| Argininosuccinate synthase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065667|gb|ADY73674.1| Argininosuccinate synthase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 402
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
+L +SGG D+S + W DR V T + D GQ ++ E+E + + ++
Sbjct: 1 MGKRVVLAYSGGLDTSVIVRWLADRGFEVITYTADVGQGEELGEIEEKAKKAGAVEAIID 60
Query: 66 KWKDSLGEDHILPLAILGDI 85
K+ ++ LPL G +
Sbjct: 61 DIKEEFAREYCLPLMRAGAL 80
>gi|224061092|ref|XP_002187518.1| PREDICTED: guanine monphosphate synthetase [Taeniopygia guttata]
Length = 693
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ L+L SGG DS+ C + AL+R ++V + D G K E + +K+
Sbjct: 236 SSKVLVLLSGGVDSTVCTALLNRALNR-EQVIAVHIDNGFMRKRESQAVEEALRKL 290
>gi|17228854|ref|NP_485402.1| tRNA-specific 2-thiouridylase MnmA [Nostoc sp. PCC 7120]
gi|24638319|sp|Q8YX56|MNMA_ANASP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|17130706|dbj|BAB73316.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Nostoc sp. PCC 7120]
Length = 352
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSST + ++ V L+
Sbjct: 2 KKVVVGLSGGVDSSTAAAILHNQGYEVIGLT 32
>gi|261403032|ref|YP_003247256.1| hypothetical protein Metvu_0916 [Methanocaldococcus vulcanius M7]
gi|261370025|gb|ACX72774.1| conserved hypothetical protein [Methanocaldococcus vulcanius M7]
Length = 261
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
N I++ P A++ FSGG DS+T A + FD +E +S
Sbjct: 56 NVSIEEKPRAVIAFSGGVDSTTSAVIAKNIFD-IEAVS 92
>gi|301758858|ref|XP_002915251.1| PREDICTED: argininosuccinate synthase-like [Ailuropoda
melanoleuca]
Length = 412
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
+ S +L +SGG D+S L W ++ V + GQ+ E E R K
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFE-EARKKAMK 53
>gi|325678174|ref|ZP_08157803.1| TIGR00268 family protein [Ruminococcus albus 8]
gi|324110066|gb|EGC04253.1| TIGR00268 family protein [Ruminococcus albus 8]
Length = 267
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 39/184 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
SA FSGG DS+ L+ A + D V ++ K EL + +++ + ++
Sbjct: 20 SAAAAFSGGVDSAFLLAAAKEALGDEVIAVTAVSPSLPKRELADAEALCRQLSVRLTVFQ 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + + + K + +F +A + G+
Sbjct: 80 S--------DELELEEYRKNPKNRCYYCKHR--------------LFTRI-LEIAEKNGL 116
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYETWKLAQD 186
+++ G + D Y R ++ LG + +PL K E +L+Q+
Sbjct: 117 AHVIEGSNKDDDGDY---RPG----MQALAKLG------IISPLRECGFTKAEIRRLSQE 163
Query: 187 IGGQ 190
+G
Sbjct: 164 MGLP 167
>gi|281349494|gb|EFB25078.1| hypothetical protein PANDA_003249 [Ailuropoda melanoleuca]
Length = 375
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
+ S +L +SGG D+S L W ++ V + GQ+ E E R K
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFE-EARKKAMK 53
>gi|260828723|ref|XP_002609312.1| hypothetical protein BRAFLDRAFT_124725 [Branchiostoma floridae]
gi|229294668|gb|EEN65322.1| hypothetical protein BRAFLDRAFT_124725 [Branchiostoma floridae]
Length = 383
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + +L +SGG D+S L W +++ V D GQ E + K +
Sbjct: 1 MSEDKKVVLAYSGGLDTSCILVWLIEQGFDVIAYMADVGQ----EEDFAEAKEKALKLGA 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN 93
K + + I + +++ ++
Sbjct: 57 KKVYIEDLKKQFVDEYIWPAVQANAIYED 85
>gi|325989606|ref|YP_004249305.1| Trifunctional protein ribF/mnmA [Mycoplasma suis KI3806]
gi|323574691|emb|CBZ40347.1| Trifunctional protein ribF/mnmA [Mycoplasma suis]
Length = 369
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS-FDY-GQRNKVELECRLCVRK 58
M+ +++K ++ SGG DSS +V + ++ Q N++E++
Sbjct: 1 MSSLVEK--KVVIALSGGVDSSVAALLLKKEGYKVFGIHMINWDSQLNELEMDKECESLS 58
Query: 59 KIVELMPKWKDSL 71
K E L
Sbjct: 59 KDREYAEIIAQQL 71
>gi|298376473|ref|ZP_06986428.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
gi|298266351|gb|EFI08009.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
Length = 233
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 57/225 (25%), Gaps = 58/225 (25%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKI 60
ND K +LL+SGG DS W +D+ + L D R E
Sbjct: 3 NDTYNKK---VLLYSGGMDS-----WLIDKLWKPDIRLYVDMNTRYSKEE---------- 44
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L +D I+ L +P RN+ + A
Sbjct: 45 -------MKRLPDDTIIERLDLSKWEREDKI----------------IPLRNMYLIGIAT 81
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL-------GMESHVTVHTPLM 173
I +G D D E + + + ++
Sbjct: 82 NYG-----DEICLGATAGDRVL--DKSPVFAELYEDLLGYLYQKQHWTEKRTIKINLDYK 134
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
K E K Q I ++ S +CY C
Sbjct: 135 AYTKTELLK--QYIAQGGNISEAFSSSFSCYAPVDGHECWNCKPC 177
>gi|256372424|ref|YP_003110248.1| argininosuccinate synthase [Acidimicrobium ferrooxidans DSM
10331]
gi|256009008|gb|ACU54575.1| argininosuccinate synthase [Acidimicrobium ferrooxidans DSM
10331]
Length = 398
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
A +L +SGG D+S L W +R V LS D GQ+ +E + R I +
Sbjct: 1 MAEVVVLAYSGGLDTSVALKWLQVERGFDVVALSVDVGQQEDLEAVRTRALATGAIAAEV 60
Query: 65 PKWKDSLGEDHI 76
+D+ +D+I
Sbjct: 61 VDARDAFADDYI 72
>gi|167761978|ref|ZP_02434105.1| hypothetical protein BACSTE_00323 [Bacteroides stercoris ATCC
43183]
gi|167700210|gb|EDS16789.1| hypothetical protein BACSTE_00323 [Bacteroides stercoris ATCC
43183]
Length = 431
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 59/202 (29%), Gaps = 43/202 (21%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+++ L+ SGG DS L E ++ R E + +++
Sbjct: 14 QLLQPTDKVLVALSGGADSVALLRLLQASGYDCEAAHCNFHLRG-AESDRDEAFVRQLCV 72
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV-PGRNIIFLVFAAT 121
++ D + ++ +++++++ L + R
Sbjct: 73 KQQVPLHTVHFDT----------ARTAEERHISIEMAARELRYGWFEEIR---------- 112
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPL 172
++ I + + D + + + G + + PL
Sbjct: 113 --QKINADAIAVAHHQDDS----------VETLLLNLIRGTGINGLRGIRPKNGHIVRPL 160
Query: 173 MWLKKYETWKLAQDIGGQDLVN 194
+ L++ E IG + +
Sbjct: 161 LCLERKEIISYLNRIGQDYVTD 182
>gi|89069527|ref|ZP_01156871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanicola granulosus HTCC2516]
gi|89044862|gb|EAR50952.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanicola granulosus HTCC2516]
Length = 379
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + + C + I + +
Sbjct: 20 RVVVAMSGGVDSSVVAAELAREGYDVVGVTLQLYDHGAALARKGACCAGRDIHDARRVAE 79
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L ++ ++ A P VP
Sbjct: 80 EMGFPHYVLD---YENVFKDAVIDEFADSYLAGATP---VP 114
>gi|238922133|ref|YP_002935647.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium eligens ATCC 27750]
gi|238873805|gb|ACR73513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium eligens ATCC 27750]
Length = 355
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 22/69 (31%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DSS ++ V ++ Q + E C V+ +
Sbjct: 1 MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDDATEAAENGCCGISAVDDARR 60
Query: 67 WKDSLGEDH 75
L +
Sbjct: 61 VAGQLDIPY 69
>gi|148266282|ref|YP_001232988.1| thiamine biosynthesis protein [Geobacter uraniireducens Rf4]
gi|146399782|gb|ABQ28415.1| thiamine biosynthesis protein [Geobacter uraniireducens Rf4]
Length = 334
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL L SGG DS+ + L++ VE L+F
Sbjct: 1 MQKKALALLSGGLDSTLAVKVMLEQGIAVEALNF 34
>gi|332987373|gb|AEF06356.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|301157036|emb|CBW16519.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|323128744|gb|ADX16174.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|205351736|ref|YP_002225537.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|226729115|sp|B5R6S6|THII_SALG2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|205271517|emb|CAR36335.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326626771|gb|EGE33114.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|168818964|ref|ZP_02830964.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205343976|gb|EDZ30740.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320084701|emb|CBY94492.1| Thiamine biosynthesis protein thiI [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|168240248|ref|ZP_02665180.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168465515|ref|ZP_02699397.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194446549|ref|YP_002039667.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194448678|ref|YP_002044460.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|226729114|sp|B4T8R6|THII_SALHS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|238693541|sp|B4SWR7|THII_SALNS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|194405212|gb|ACF65434.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194406982|gb|ACF67201.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|195631978|gb|EDX50498.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|205339722|gb|EDZ26486.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|168232398|ref|ZP_02657456.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|194472893|ref|ZP_03078877.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194459257|gb|EDX48096.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|205333477|gb|EDZ20241.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|168261142|ref|ZP_02683115.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|198242480|ref|YP_002214379.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200390289|ref|ZP_03216900.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|207855906|ref|YP_002242557.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|226726953|sp|B5FKT0|THII_SALDC RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|226729116|sp|B5QTH3|THII_SALEP RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|197936996|gb|ACH74329.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199602734|gb|EDZ01280.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205349900|gb|EDZ36531.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|206707709|emb|CAR31993.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|326622127|gb|EGE28472.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|167551764|ref|ZP_02345517.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205323444|gb|EDZ11283.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|161615387|ref|YP_001589352.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|189030643|sp|A9MX06|THII_SALPB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|161364751|gb|ABX68519.1| hypothetical protein SPAB_03158 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|161504391|ref|YP_001571503.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|189030642|sp|A9MM39|THII_SALAR RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|160865738|gb|ABX22361.1| hypothetical protein SARI_02502 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|297618558|ref|YP_003706663.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
voltae A3]
gi|297618618|ref|YP_003706723.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
voltae A3]
gi|297377535|gb|ADI35690.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
voltae A3]
gi|297377595|gb|ADI35750.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
voltae A3]
Length = 429
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 25/179 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L S G DS R ++ L K E V +K+V ++ +
Sbjct: 232 KVLVLTSDGIDSPVSAFMMAKRGCKLVLLHM------KTSEEGAEKV-QKLVNVLKDYDP 284
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
SL + L I K+ ++ F R L A AY+
Sbjct: 285 SLKYVEVDFKETLQGI------KDDLTVLKKEKYTCIFCKRR---MLKIAERFAYKYKCD 335
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + + ++ + +++ V PL+ K E +LA+ IG
Sbjct: 336 AIINGDNMGQVAS---------QTLKNLRVISNCTNLQVLRPLIGFDKVEIMRLAEKIG 385
>gi|157146961|ref|YP_001454280.1| thiamine biosynthesis protein ThiI [Citrobacter koseri ATCC
BAA-895]
gi|189030622|sp|A8AK31|THII_CITK8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|157084166|gb|ABV13844.1| hypothetical protein CKO_02738 [Citrobacter koseri ATCC BAA-895]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|56414420|ref|YP_151495.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|168237538|ref|ZP_02662596.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194735073|ref|YP_002113458.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250561|ref|YP_002145407.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197266005|ref|ZP_03166079.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197363340|ref|YP_002142977.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|204926685|ref|ZP_03217887.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|238911442|ref|ZP_04655279.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|81821410|sp|Q5PFQ4|THII_SALPA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|226726952|sp|B5EXG6|THII_SALA4 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|238689943|sp|B5BDA7|THII_SALPK RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|238690695|sp|B4TMA5|THII_SALSV RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|56128677|gb|AAV78183.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|194710575|gb|ACF89796.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197094817|emb|CAR60350.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197214264|gb|ACH51661.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197244260|gb|EDY26880.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197289454|gb|EDY28817.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|204323350|gb|EDZ08545.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|322614705|gb|EFY11634.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618811|gb|EFY15699.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623518|gb|EFY20357.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629184|gb|EFY25963.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631904|gb|EFY28658.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637359|gb|EFY34061.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642044|gb|EFY38654.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647863|gb|EFY44338.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652541|gb|EFY48895.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653297|gb|EFY49630.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660554|gb|EFY56790.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664706|gb|EFY60899.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669241|gb|EFY65391.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670786|gb|EFY66919.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678975|gb|EFY75030.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682003|gb|EFY78028.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685168|gb|EFY81165.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323194484|gb|EFZ79679.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196979|gb|EFZ82121.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203964|gb|EFZ88981.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206951|gb|EFZ91904.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210831|gb|EFZ95703.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214522|gb|EFZ99273.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323223079|gb|EGA07422.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323227028|gb|EGA11209.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230154|gb|EGA14274.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233892|gb|EGA17981.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238414|gb|EGA22472.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244102|gb|EGA28111.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246262|gb|EGA30245.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251888|gb|EGA35751.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257885|gb|EGA41564.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261102|gb|EGA44694.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264968|gb|EGA48467.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272531|gb|EGA55938.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|16763805|ref|NP_459420.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167992275|ref|ZP_02573373.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|3915896|sp|P55913|THII_SALTY RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|2098763|gb|AAB63031.1| ThiI [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16418930|gb|AAL19379.1| sulfur transfer protein (from cys to ThiS and from IscS to U8-tRNA)
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|205329560|gb|EDZ16324.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|261245708|emb|CBG23504.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267992137|gb|ACY87022.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|312911458|dbj|BAJ35432.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321225153|gb|EFX50214.1| Thiamine biosynthesis protein thiI [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
Length = 482
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|310778067|ref|YP_003966400.1| Queuosine synthesis [Ilyobacter polytropus DSM 2926]
gi|309747390|gb|ADO82052.1| Queuosine synthesis [Ilyobacter polytropus DSM 2926]
Length = 329
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 28/130 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRL--CVRKKIVELM 64
AL LFSGG DS+ + +D+ V L+F +G +N+ + VR + V+
Sbjct: 2 RALALFSGGLDSALAIKVVVDQGIEVIALNFVSHFFGGKNEKAEKMAEQLGVRLEYVDFS 61
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ L E S S KN+ I + + AA L
Sbjct: 62 KIHTEILKE------------SPSGRGKNMNPCIDCH-----------ALMFEVAAKLLE 98
Query: 125 RLGITNIVIG 134
+ I+ G
Sbjct: 99 KYDANFIISG 108
>gi|295398651|ref|ZP_06808675.1| thiamine biosynthesis/tRNA modification protein ThiI [Aerococcus
viridans ATCC 11563]
gi|294973086|gb|EFG48889.1| thiamine biosynthesis/tRNA modification protein ThiI [Aerococcus
viridans ATCC 11563]
Length = 415
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + +A+L+ SGG DS A+ R R+ + F
Sbjct: 184 PVGTSANAVLMLSGGIDSPVAGYLAMKRGMRITAVHF 220
>gi|227544235|ref|ZP_03974284.1| thiamine-phosphate kinase [Lactobacillus reuteri CF48-3A]
gi|300908231|ref|ZP_07125697.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
reuteri SD2112]
gi|227185788|gb|EEI65859.1| thiamine-phosphate kinase [Lactobacillus reuteri CF48-3A]
gi|300894658|gb|EFK88014.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
reuteri SD2112]
Length = 406
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 25/182 (13%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
DS + R +E + F + L K++ E + K+ S+ + P
Sbjct: 189 IDSPVAAYLGMKRGVSMEMVHFFSPPYTSPQ---ALAKAKQLTERLAKYSGSIKFIQV-P 244
Query: 79 LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
A + + + + M IQ + L AA L + I G
Sbjct: 245 FAEIQETVKEKVPEGYLMTIQRR------------MMLRLAAALMIKRHGLAIFNGESLG 292
Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
+ + +E+ + + + V P++ K E K+AQDI DL L E
Sbjct: 293 QVAS---------QTMESMLAINDVTSYPVLRPVLSFDKTEIIKIAQDIDTYDLSILPYE 343
Query: 199 ES 200
+
Sbjct: 344 DC 345
>gi|218682213|ref|ZP_03529814.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhizobium etli CIAT 894]
Length = 294
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 55/194 (28%), Gaps = 22/194 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130
Query: 129 TNIVIGVC-------ETDYSGYPDCRHDTIRAIETA------INLGMESHVT-VHTPLMW 174
+ G D G R R + + + + + PL
Sbjct: 131 DALATGHYIRSRPNPLADKPG----RRALFRPADADRDQSYFLFATTQEQIDYLRFPLGG 186
Query: 175 LKKYETWKLAQDIG 188
L K ET +LA+++G
Sbjct: 187 LPKAETRRLAEEMG 200
>gi|194468300|ref|ZP_03074286.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
reuteri 100-23]
gi|194453153|gb|EDX42051.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
reuteri 100-23]
Length = 406
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 25/182 (13%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
DS + R +E + F + L K++ E + K+ S+ + P
Sbjct: 189 IDSPVAAYLGMKRGVSMEMVHFFSPPYTSPQ---ALAKAKQLTERLAKYSGSIKFIQV-P 244
Query: 79 LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
A + + + + M IQ + L AA L + I G
Sbjct: 245 FAEIQETVKEKVPEGYLMTIQRR------------MMLRLAAALMIKRHGLAIFNGESLG 292
Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
+ + +E+ + + + V P++ K E K+AQDI DL L E
Sbjct: 293 QVAS---------QTMESMLAINDVTSYPVLRPVLSFDKTEIIKIAQDIDTYDLSILPYE 343
Query: 199 ES 200
+
Sbjct: 344 DC 345
>gi|18976470|ref|NP_577827.1| NAD synthetase [Pyrococcus furiosus DSM 3638]
gi|25090761|sp|Q8U4I9|NADE_PYRFU RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|18892011|gb|AAL80222.1| NH(3)-dependent NAD+ synthetase [Pyrococcus furiosus DSM 3638]
Length = 257
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 71/194 (36%), Gaps = 40/194 (20%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
I + A +++ SGG DS+T A D++ L Y K
Sbjct: 17 IKENAKQGVVIGISGGVDSATVAYLATKALGKDKILGLIMPY-------------YENKD 63
Query: 61 VELMPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
VE ++LG I+ + + D SSL + K N + R ++ L
Sbjct: 64 VEDAKLVAENLGIRYKIINIKPIVDTIQSSLDVALDRKSLGNIMARV----R-MVLL--- 115
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+ A LG +V+G R + + T G + + PL+ + K E
Sbjct: 116 YSYANSLG--RLVLGTS---------NRSEFLTGYFTKWGDG----ASDYAPLINIYKTE 160
Query: 180 TWKLAQDIGGQDLV 193
W++A+ IG +
Sbjct: 161 VWEVARIIGVPQSI 174
>gi|148543738|ref|YP_001271108.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri DSM
20016]
gi|184153144|ref|YP_001841485.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri JCM 1112]
gi|227363282|ref|ZP_03847414.1| thiamine-phosphate kinase [Lactobacillus reuteri MM2-3]
gi|325682110|ref|ZP_08161628.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri MM4-1A]
gi|189030637|sp|A5VIU7|THII_LACRD RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|229558681|sp|B2G6C3|THII_LACRJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|148530772|gb|ABQ82771.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
reuteri DSM 20016]
gi|183224488|dbj|BAG25005.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri JCM 1112]
gi|227071738|gb|EEI10029.1| thiamine-phosphate kinase [Lactobacillus reuteri MM2-3]
gi|290558717|gb|ADD37852.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri]
gi|324978754|gb|EGC15703.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri MM4-1A]
Length = 406
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 25/182 (13%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
DS + R +E + F + L K++ E + K+ S+ + P
Sbjct: 189 IDSPVAAYLGMKRGVSMEMVHFFSPPYTSPQ---ALAKAKQLTERLAKYSGSIKFIQV-P 244
Query: 79 LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
A + + + + M IQ + L AA L + I G
Sbjct: 245 FAEIQETVKEKVPEGYLMTIQRR------------MMLRLAAALMIKRHGLAIFNGESLG 292
Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
+ + +E+ + + + V P++ K E K+AQDI DL L E
Sbjct: 293 QVAS---------QTMESMLAINDVTSYPVLRPVLSFDKTEIIKIAQDIDTYDLSILPYE 343
Query: 199 ES 200
+
Sbjct: 344 DC 345
>gi|255282408|ref|ZP_05346963.1| thiamine biosynthesis/tRNA modification protein ThiI [Bryantella
formatexigens DSM 14469]
gi|255266992|gb|EET60197.1| thiamine biosynthesis/tRNA modification protein ThiI [Bryantella
formatexigens DSM 14469]
Length = 393
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS R +++ + F + ++K+++L
Sbjct: 176 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYF-----HAPPYTSE-RAKQKVIDL 229
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G H++ + + I + A
Sbjct: 230 ARIVSHYSGPIMLHVVNFTDIQLYIYEQCPHEELTIIMRRY------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A G ++ G + + +++ + V+ PL+ K E
Sbjct: 278 FARESGSLGLITGESIGQVAS---------QTMQSLAATNEVCTLPVYRPLIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++ IG + E+
Sbjct: 329 DVSLKIGAYETSIQPFEDC 347
>gi|168700409|ref|ZP_02732686.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Gemmata obscuriglobus UQM 2246]
Length = 357
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 37/128 (28%), Gaps = 4/128 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L SGG DSS + V L G + + R +K +
Sbjct: 3 RVVLAMSGGVDSSASAVLLKKQGHEVIGLFMRTGTHGHDQPDERRDNKKGCCSAIDAGDA 62
Query: 70 SLGEDHILPLAILGDISHSSLTKNV---AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D L + S + + A + PN V N + T +L
Sbjct: 63 RRVADK-LDIPFYALDFESEFNRIIDYFADEYVRGRTPNPCVVCNNWLKFGQLWTFGQKL 121
Query: 127 GITNIVIG 134
G I G
Sbjct: 122 GADFIATG 129
>gi|87198069|ref|YP_495326.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Novosphingobium aromaticivorans DSM 12444]
gi|123487802|sp|Q2G2Z1|MNMA_NOVAD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|87133750|gb|ABD24492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Novosphingobium aromaticivorans DSM 12444]
Length = 384
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 63/196 (32%), Gaps = 25/196 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVEL 63
A ++ SGG DSS A V ++ +DYG + C C I +
Sbjct: 21 SARRIVVAMSGGVDSSVVAGLAAATGAEVIGVTLQLYDYGAATGRKGAC--CAGDDIRDA 78
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVPGRNIIF---LVFA 119
++ SS + V + D+ L T +P
Sbjct: 79 RAVADRLGIAHYVFDH-------ESSFREEVVERFADDYLSGRTPIPCVRCNMGPKFTDL 131
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-----INLGM--ESHVTVHTPL 172
+A LG + G P + RA++ A G E + PL
Sbjct: 132 LAMARELGADCLATG-HYVRRVMGP-AGPELHRAVDPARDQSYFLYGTTEEQLAFLRFPL 189
Query: 173 MWLKKYETWKLAQDIG 188
L K ET +A+++G
Sbjct: 190 GGLPKTETRLIAEELG 205
>gi|84489373|ref|YP_447605.1| ATPase [Methanosphaera stadtmanae DSM 3091]
gi|84372692|gb|ABC56962.1| predicted ATPase of PP-loop superfamily [Methanosphaera
stadtmanae DSM 3091]
Length = 231
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+++L+SGG+DS+ L AL+ D + L
Sbjct: 2 KSVILYSGGKDSTMALYHALENGDDIYAL 30
>gi|310778027|ref|YP_003966360.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ilyobacter polytropus DSM 2926]
gi|309747350|gb|ADO82012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ilyobacter polytropus DSM 2926]
Length = 356
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 12/141 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--- 63
++ SGG DSS + V ++ ++ + + K L
Sbjct: 1 MKKKVVVGMSGGVDSSVAAYLLKEEGYEVIGVTL----KHLSDEDSENTNTKTCCSLDDI 56
Query: 64 --MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
LG H + A+ + + + P+ V I + A
Sbjct: 57 YDAKMACFKLGIPHYVVDAV--EPFKKDVIDYFIGEYSKGITPSPCVVCDEKIKIKKLAE 114
Query: 122 LAYRLGITNIVIG-VCETDYS 141
A +LG I G C+ YS
Sbjct: 115 TADKLGADYISTGHYCDVSYS 135
>gi|313901023|ref|ZP_07834511.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
sp. HGF2]
gi|312953981|gb|EFR35661.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
sp. HGF2]
Length = 402
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 65/197 (32%), Gaps = 37/197 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL++ SGG DS + R +E + + + K++EL +
Sbjct: 183 KALVMLSGGIDSPVASYLTMKRGVAIECVHY------ASPPYTSQAAQDKVLELARQLAP 236
Query: 70 SLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G H++P L + + ++ A+ I + A L +
Sbjct: 237 YQGHIRVHVVPFTDLQLAIYKNCDESYAITIMRR------------MMYRIAQRLCEQQH 284
Query: 128 ITNIV----IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
IV IG + T+ +++T + V P+ + K E +
Sbjct: 285 CLAIVNGESIGQVAS----------QTLESMQTINCVTT---TPVIRPVACMDKVEIINV 331
Query: 184 AQDIGGQDLVNLILEES 200
++ I D+ E+
Sbjct: 332 SRAIDTYDISIQPFEDC 348
>gi|15643726|ref|NP_228774.1| hypothetical protein TM0966 [Thermotoga maritima MSB8]
gi|222100584|ref|YP_002535152.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
gi|4981504|gb|AAD36045.1|AE001759_9 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|221572974|gb|ACM23786.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
Length = 268
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ IK +++FSGG DS+ A + L+ D + E+E + I
Sbjct: 8 SEAIKSKKKLVVMFSGGVDSTLLAKLAREVLGKNAVALTIDSPVIPRKEIEEAKNLANLI 67
Query: 61 -VELMPKWKDSLGEDHIL 77
+ + L H++
Sbjct: 68 GIRHEFIELNELKSRHLI 85
>gi|328715380|ref|XP_001943073.2| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like isoform 1
[Acyrthosiphon pisum]
Length = 682
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG 43
L+L SGG DS+ C + ALDR ++V + D G
Sbjct: 227 KVLVLLSGGVDSTVCAALLHRALDR-EQVIAVHIDNG 262
>gi|328715378|ref|XP_003245614.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like isoform 2
[Acyrthosiphon pisum]
Length = 713
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG 43
L+L SGG DS+ C + ALDR ++V + D G
Sbjct: 258 KVLVLLSGGVDSTVCAALLHRALDR-EQVIAVHIDNG 293
>gi|325662162|ref|ZP_08150780.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 4_1_37FAA]
gi|331085959|ref|ZP_08335042.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325471611|gb|EGC74831.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 4_1_37FAA]
gi|330406882|gb|EGG86387.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 393
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 60/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +E F + +K +
Sbjct: 176 PVGTNGKAMLLLSGGIDSPVAGYMISKRGVGLEATYF-----HAPPYTSERAKQKVIDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ K+ + + I I + + ++ + A
Sbjct: 231 KLVAKYSGPIKLHIVNFTDIQLYIYDKCPHDELTIIMRRY-------------MMKIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A G ++ G + + +++ + V+ P++ K E
Sbjct: 278 FAKESGCLGLITGESIGQVAS---------QTMQSLAATNDVCTLPVYRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++A+ I + L E+
Sbjct: 329 EIAEKIDTYETSILPFEDC 347
>gi|320580044|gb|EFW94267.1| Arginosuccinate synthetase [Pichia angusta DL-1]
Length = 415
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ K + L +SGG D+S L+W L++ V + GQ E + K +
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFMANIGQ----EEDFAAAEEKALA 52
>gi|330340409|ref|NP_001193365.1| GMP synthase [Bos taurus]
gi|296491166|gb|DAA33239.1| guanine monphosphate synthetase [Bos taurus]
Length = 699
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + +K+
Sbjct: 244 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALRKL 296
>gi|296114840|ref|ZP_06833488.1| tRNA-specific 2-thiouridylase MnmA [Gluconacetobacter hansenii ATCC
23769]
gi|295978546|gb|EFG85276.1| tRNA-specific 2-thiouridylase MnmA [Gluconacetobacter hansenii ATCC
23769]
Length = 358
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 5/126 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
L+ SGG DSS + ++ V + Y R + C + I +
Sbjct: 2 RILVAMSGGVDSSVVAARLVEEGHEVVGATLQLYDSRESA-RKGACCAGRDIHDARRVAD 60
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+++ S+ + A + P V + +A LG+
Sbjct: 61 RLGIAHYVID---AERRFRDSVIETFADAYAEGETPVPCVACNQGVKFTDLLGMARDLGV 117
Query: 129 TNIVIG 134
+ G
Sbjct: 118 DAMATG 123
>gi|83405734|gb|AAI11274.1| GMPS protein [Bos taurus]
Length = 704
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ D+V + D G K E + +K+
Sbjct: 249 KVLVLLSGGVDSTVCTALLNRALNQ-DQVIAVHIDNGFMRKRESQSVEEALRKL 301
>gi|57242597|ref|ZP_00370534.1| argininosuccinate synthase [Campylobacter upsaliensis RM3195]
gi|57016526|gb|EAL53310.1| argininosuccinate synthase [Campylobacter upsaliensis RM3195]
Length = 406
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE--- 62
K A+L +SGG D+S L W D + V T + D GQ ++E + I E
Sbjct: 4 KVKKAVLAYSGGLDTSIILKWLQDEYGCEVVTFTADIGQGEELEPARLKALSLGIKEENI 63
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ KD +D++ P+ I ++
Sbjct: 64 FIKDLKDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|225387765|ref|ZP_03757529.1| hypothetical protein CLOSTASPAR_01535 [Clostridium asparagiforme
DSM 15981]
gi|225046126|gb|EEG56372.1| hypothetical protein CLOSTASPAR_01535 [Clostridium asparagiforme
DSM 15981]
Length = 394
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 65/197 (32%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS R +++ + F + ++K+V+L
Sbjct: 176 PVGTNGRAMLLLSGGIDSPVAGYMIAKRGVKIDAVYF-----HAPPYTS-DRAKQKVVDL 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
G + L ++ + + + + + A +A
Sbjct: 230 ANLVARYAGP---INLYVVNFTDIQLYIYDKCPHEELTIIMRRY-------MMRIAEAIA 279
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +++ G + T++++ + + V P++ K E L
Sbjct: 280 NQTGAISLITGESIGQVAS------QTVQSLAATNEVCT---MPVFRPVIGFDKQEIVDL 330
Query: 184 AQDIGGQDLVNLILEES 200
++ IG + E+
Sbjct: 331 SEKIGTFETSIQPFEDC 347
>gi|332818178|ref|XP_003310107.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 2 [Pan
troglodytes]
Length = 594
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ ++V + D G K E + KK+
Sbjct: 139 KVLVLLSGGVDSTVCTALLNRALNQ-EQVIAVHIDNGFMRKRESQSVEEALKKL 191
>gi|332818176|ref|XP_003310106.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 1 [Pan
troglodytes]
Length = 693
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ ++V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-EQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|257465621|ref|ZP_05629992.1| thiamine biosynthesis protein ThiI [Actinobacillus minor 202]
gi|257451281|gb|EEV25324.1| thiamine biosynthesis protein ThiI [Actinobacillus minor 202]
Length = 483
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSSSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|240949560|ref|ZP_04753899.1| thiamine biosynthesis protein ThiI [Actinobacillus minor NM305]
gi|240296001|gb|EER46667.1| thiamine biosynthesis protein ThiI [Actinobacillus minor NM305]
Length = 483
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSSSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|196049679|pdb|2VXO|A Chain A, Human Gmp Synthetase In Complex With Xmp
gi|196049680|pdb|2VXO|B Chain B, Human Gmp Synthetase In Complex With Xmp
Length = 697
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ ++V + D G K E + KK+
Sbjct: 242 KVLVLLSGGVDSTVCTALLNRALNQ-EQVIAVHIDNGFMRKRESQSVEEALKKL 294
>gi|194374669|dbj|BAG62449.1| unnamed protein product [Homo sapiens]
Length = 642
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ ++V + D G K E + KK+
Sbjct: 187 KVLVLLSGGVDSTVCTALLNRALNQ-EQVIAVHIDNGFMRKRESQSVEEALKKL 239
>gi|62898359|dbj|BAD97119.1| guanine monophosphate synthetase variant [Homo sapiens]
Length = 693
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ ++V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-EQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|12483930|gb|AAG53900.1| MLL/GMPS fusion protein [Homo sapiens]
Length = 551
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ ++V + D G K E + KK+
Sbjct: 371 KVLVLLSGGVDSTVCTALLNRALNQ-EQVIAVHIDNGFMRKRESQSVEEALKKL 423
>gi|71892020|ref|YP_277750.1| thiamine biosynthesis protein ThiI [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|123641073|sp|Q493G5|THII_BLOPB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|71796126|gb|AAZ40877.1| sulfur transfer protein [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 486
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 67/182 (36%), Gaps = 27/182 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDS 70
L L SGG DS+ + R +V F+ G + VE + ++ +
Sbjct: 182 LSLISGGFDSAVASYMLIRRGCKVNYCFFNLGGDMHTVE----------VCRVIYFLWNK 231
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
H + I S + K + KI+DN + V R + + A+ +A R IT
Sbjct: 232 FSSSHKIK---FISIDFSEVIKEITAKIKDNQIG--VVLKR--MMIRSASLVANRYKITA 284
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
++ G S + + + S + PL+ K + LA+ IG +
Sbjct: 285 LITGEVLGQVSS---------QTLSNLTLIDSVSDHVIFRPLIAYDKEKIIDLARKIGTE 335
Query: 191 DL 192
L
Sbjct: 336 IL 337
>gi|197099468|ref|NP_001124563.1| GMP synthase [glutamine-hydrolyzing] [Pongo abelii]
gi|75041859|sp|Q5RA96|GUAA_PONAB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|55729155|emb|CAH91314.1| hypothetical protein [Pongo abelii]
Length = 693
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ ++V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-EQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|4504035|ref|NP_003866.1| GMP synthase [glutamine-hydrolyzing] [Homo sapiens]
gi|1708072|sp|P49915|GUAA_HUMAN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|595410|gb|AAA60331.1| guanosine 5'-monophosphate synthetase [Homo sapiens]
gi|15082535|gb|AAH12178.1| Guanine monphosphate synthetase [Homo sapiens]
gi|119599147|gb|EAW78741.1| guanine monphosphate synthetase, isoform CRA_b [Homo sapiens]
gi|124000223|gb|ABM87620.1| guanine monphosphate synthetase [synthetic construct]
gi|157929256|gb|ABW03913.1| guanine monphosphate synthetase [synthetic construct]
gi|158256440|dbj|BAF84193.1| unnamed protein product [Homo sapiens]
gi|164691081|dbj|BAF98723.1| unnamed protein product [Homo sapiens]
Length = 693
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ ++V + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQ-EQVIAVHIDNGFMRKRESQSVEEALKKL 290
>gi|126274941|ref|XP_001387008.1| argininosuccinate synthetase [Scheffersomyces stipitis CBS 6054]
gi|126212877|gb|EAZ62985.1| argininosuccinate synthetase [Pichia stipitis CBS 6054]
Length = 416
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ K + L +SGG D+S L+W L+ V + GQ E + +
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEEGYEVIAFLANIGQEEDFEAAEKKALA 52
>gi|312127260|ref|YP_003992134.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor hydrothermalis 108]
gi|311777279|gb|ADQ06765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caldicellulosiruptor hydrothermalis 108]
Length = 360
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS + + V +
Sbjct: 1 MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGAT 33
>gi|227823283|ref|YP_002827255.1| tRNA-specific 2-thiouridylase MnmA [Sinorhizobium fredii NGR234]
gi|254811457|sp|C3MI00|MNMA_RHISN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|227342284|gb|ACP26502.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sinorhizobium fredii NGR234]
Length = 398
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 51/193 (26%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y V C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TLGIPHYVLD---YEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGA 130
Query: 129 TNIVIGV-----------CETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
+ G + + Y R ++ + PL L
Sbjct: 131 DALATGHYIRSRPSPKPRYQGQRALY---RPTDAERDQSYFLFATTQEQIDYLRFPLGNL 187
Query: 176 KKYETWKLAQDIG 188
K ET LA+++G
Sbjct: 188 SKPETRALAEEMG 200
>gi|298675346|ref|YP_003727096.1| argininosuccinate synthase [Methanohalobium evestigatum Z-7303]
gi|298288334|gb|ADI74300.1| argininosuccinate synthase [Methanohalobium evestigatum Z-7303]
Length = 395
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + +L +SGG D+S C+ + +D V T++ + GQ + E++ +KI +
Sbjct: 1 MPEPKKVVLAYSGGLDTSVCIPLLKEEYGYDEVITVAVNVGQ-PEEEIKEADEKAEKISD 59
Query: 63 --LMPKWKDSLGEDHILPL 79
+ D+I PL
Sbjct: 60 KHYTIDARKEFVNDYIFPL 78
>gi|157813146|gb|ABV81318.1| putative GMP synthetase [Podura aquatica]
Length = 220
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
+ L+L SGG DS+ C + R D++ + D G
Sbjct: 42 QNKQVLMLLSGGVDSTVCAALLKKALREDQIIAVHIDNG 80
>gi|255722577|ref|XP_002546223.1| argininosuccinate synthase [Candida tropicalis MYA-3404]
gi|240136712|gb|EER36265.1| argininosuccinate synthase [Candida tropicalis MYA-3404]
Length = 416
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K + L +SGG D+S L+W L++ V + GQ E + +K +
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQ----EEDFEAAEKKALAIG 54
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
K+ + I +++ +NV
Sbjct: 55 ATKFVVVDVRKEFVEKVCFPAIQSNAIYENV 85
>gi|14521864|ref|NP_127340.1| hypothetical protein PAB1092 [Pyrococcus abyssi GE5]
gi|5459084|emb|CAB50570.1| Predicted ATPase of the PP-loop superfamilyl [Pyrococcus abyssi
GE5]
Length = 303
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 58/210 (27%), Gaps = 51/210 (24%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++KK L+ SGG+DS+ +E L + G KK E
Sbjct: 42 KLLKKDEKILVAVSGGKDSAVTAYVLNKLGYNIECLHINLG---------IGEYSKKSEE 92
Query: 63 LMPKWKDSLGED-HILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLV 117
K + +G HI+ + + + + + N F
Sbjct: 93 YAKKQCELIGAPLHIVRIKEILGYGIGEVKTRRPTCSYCGLTKRYIMNKF---------- 142
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-------------S 164
AY G I G D + + + + E
Sbjct: 143 -----AYDNGFDAIATGHNLDDEASF---------LLNNLLYWNTEYIAKGGPLLPAEGK 188
Query: 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
V PL L + E A +G + +V
Sbjct: 189 FVKKVKPLYELTEREVVAYALAVGLEYIVE 218
>gi|315160094|gb|EFU04111.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0312]
Length = 398
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 176 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 229
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 230 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 279
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 280 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 330
Query: 193 VNLILEES 200
E+
Sbjct: 331 AIQPFEDC 338
>gi|315145974|gb|EFT89990.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX2141]
Length = 398
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 176 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 229
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 230 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 279
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 280 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 330
Query: 193 VNLILEES 200
E+
Sbjct: 331 AIQPFEDC 338
>gi|307290152|ref|ZP_07570071.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0411]
gi|306498780|gb|EFM68278.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0411]
gi|315148806|gb|EFT92822.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX4244]
gi|315171829|gb|EFU15846.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX1342]
gi|315576286|gb|EFU88477.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0309B]
gi|315582778|gb|EFU94969.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0309A]
Length = 398
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 176 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 229
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 230 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 279
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 280 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 330
Query: 193 VNLILEES 200
E+
Sbjct: 331 AIQPFEDC 338
>gi|297623979|ref|YP_003705413.1| argininosuccinate synthase [Truepera radiovictrix DSM 17093]
gi|297165159|gb|ADI14870.1| argininosuccinate synthase [Truepera radiovictrix DSM 17093]
Length = 430
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
IKKA +L +SGG D+S L+W + V + D GQ +V +R V+
Sbjct: 17 PIKKAQKVVLAYSGGLDTSVILAWLREVYGAEVVAFTADIGQGEEVAEAKEKALRTGAVQ 76
Query: 63 LMP 65
Sbjct: 77 AYA 79
>gi|256618282|ref|ZP_05475128.1| thiamine biosynthesis protein [Enterococcus faecalis ATCC 4200]
gi|256597809|gb|EEU16985.1| thiamine biosynthesis protein [Enterococcus faecalis ATCC 4200]
Length = 404
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 182 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 235
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 236 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 285
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 286 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 336
Query: 193 VNLILEES 200
E+
Sbjct: 337 AIQPFEDC 344
>gi|255970837|ref|ZP_05421423.1| thiamine biosynthesis protein [Enterococcus faecalis T1]
gi|255961855|gb|EET94331.1| thiamine biosynthesis protein [Enterococcus faecalis T1]
Length = 404
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 182 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 235
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 236 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 285
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 286 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 336
Query: 193 VNLILEES 200
E+
Sbjct: 337 AIQPFEDC 344
>gi|296109904|ref|YP_003616853.1| argininosuccinate synthase [Methanocaldococcus infernus ME]
gi|295434718|gb|ADG13889.1| argininosuccinate synthase [Methanocaldococcus infernus ME]
Length = 388
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
A+L +SGG D+S CL D+ V ++ D GQ
Sbjct: 2 KAVLAYSGGLDTSCCLKLLEDQGYEVISVCVDVGQ 36
>gi|255974412|ref|ZP_05424998.1| thiamine biosynthesis protein [Enterococcus faecalis T2]
gi|256761212|ref|ZP_05501792.1| thiamine biosynthesis protein [Enterococcus faecalis T3]
gi|256852475|ref|ZP_05557851.1| thiazole biosynthesis protein ThiI [Enterococcus faecalis T8]
gi|256958169|ref|ZP_05562340.1| thiamine biosynthesis protein [Enterococcus faecalis DS5]
gi|256960315|ref|ZP_05564486.1| thiamine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256962806|ref|ZP_05566977.1| thiamine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|257083367|ref|ZP_05577728.1| thiamine biosynthesis protein [Enterococcus faecalis Fly1]
gi|257091154|ref|ZP_05585515.1| thiamin biosynthesis protein [Enterococcus faecalis CH188]
gi|257420567|ref|ZP_05597557.1| thiazole biosynthesis protein thiI [Enterococcus faecalis X98]
gi|300860868|ref|ZP_07106955.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TUSoD Ef11]
gi|255967284|gb|EET97906.1| thiamine biosynthesis protein [Enterococcus faecalis T2]
gi|256682463|gb|EEU22158.1| thiamine biosynthesis protein [Enterococcus faecalis T3]
gi|256712329|gb|EEU27361.1| thiazole biosynthesis protein ThiI [Enterococcus faecalis T8]
gi|256948665|gb|EEU65297.1| thiamine biosynthesis protein [Enterococcus faecalis DS5]
gi|256950811|gb|EEU67443.1| thiamine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256953302|gb|EEU69934.1| thiamine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|256991397|gb|EEU78699.1| thiamine biosynthesis protein [Enterococcus faecalis Fly1]
gi|256999966|gb|EEU86486.1| thiamin biosynthesis protein [Enterococcus faecalis CH188]
gi|257162391|gb|EEU92351.1| thiazole biosynthesis protein thiI [Enterococcus faecalis X98]
gi|300849907|gb|EFK77657.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TUSoD Ef11]
gi|323478899|gb|ADX78338.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis 62]
gi|327536087|gb|AEA94921.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis OG1RF]
Length = 404
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 182 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 235
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 236 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 285
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 286 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 336
Query: 193 VNLILEES 200
E+
Sbjct: 337 AIQPFEDC 344
>gi|229547607|ref|ZP_04436332.1| thiamine biosynthesis protein [Enterococcus faecalis TX1322]
gi|229307297|gb|EEN73284.1| thiamine biosynthesis protein [Enterococcus faecalis TX1322]
Length = 404
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 182 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 235
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 236 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 285
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 286 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 336
Query: 193 VNLILEES 200
E+
Sbjct: 337 AIQPFEDC 344
>gi|227554381|ref|ZP_03984428.1| thiamine biosynthesis protein [Enterococcus faecalis HH22]
gi|257080634|ref|ZP_05574995.1| thiamine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257417101|ref|ZP_05594095.1| thiamine biosynthesis protein [Enterococcus faecalis AR01/DG]
gi|257417815|ref|ZP_05594809.1| thiamine biosynthesis protein [Enterococcus faecalis T11]
gi|227176500|gb|EEI57472.1| thiamine biosynthesis protein [Enterococcus faecalis HH22]
gi|256988664|gb|EEU75966.1| thiamine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257158929|gb|EEU88889.1| thiamine biosynthesis protein [Enterococcus faecalis ARO1/DG]
gi|257159643|gb|EEU89603.1| thiamine biosynthesis protein [Enterococcus faecalis T11]
Length = 404
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 182 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 235
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 236 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 285
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 286 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 336
Query: 193 VNLILEES 200
E+
Sbjct: 337 AIQPFEDC 344
>gi|227518200|ref|ZP_03948249.1| thiamine biosynthesis protein [Enterococcus faecalis TX0104]
gi|229548185|ref|ZP_04436910.1| thiamine biosynthesis protein [Enterococcus faecalis ATCC 29200]
gi|293382183|ref|ZP_06628126.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis R712]
gi|293388506|ref|ZP_06633010.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis S613]
gi|307272653|ref|ZP_07553901.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0855]
gi|307275082|ref|ZP_07556236.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX2134]
gi|307281859|ref|ZP_07562075.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0860]
gi|312899331|ref|ZP_07758665.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0470]
gi|312902619|ref|ZP_07761824.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0635]
gi|312905722|ref|ZP_07764744.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis DAPTO 512]
gi|312909083|ref|ZP_07767943.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis DAPTO 516]
gi|312952223|ref|ZP_07771100.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0102]
gi|227074356|gb|EEI12319.1| thiamine biosynthesis protein [Enterococcus faecalis TX0104]
gi|229306664|gb|EEN72660.1| thiamine biosynthesis protein [Enterococcus faecalis ATCC 29200]
gi|291080466|gb|EFE17830.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis R712]
gi|291082110|gb|EFE19073.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis S613]
gi|306503890|gb|EFM73111.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0860]
gi|306508200|gb|EFM77316.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX2134]
gi|306510648|gb|EFM79670.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0855]
gi|310628201|gb|EFQ11484.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis DAPTO 512]
gi|310629810|gb|EFQ13093.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0102]
gi|310633957|gb|EFQ17240.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0635]
gi|311290645|gb|EFQ69201.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis DAPTO 516]
gi|311293533|gb|EFQ72089.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0470]
gi|315030887|gb|EFT42819.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX4000]
gi|315032304|gb|EFT44236.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0017]
gi|315036217|gb|EFT48149.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0027]
gi|315150955|gb|EFT94971.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0012]
gi|315154545|gb|EFT98561.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0031]
gi|315156414|gb|EFU00431.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0043]
gi|315163286|gb|EFU07303.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0645]
gi|315169316|gb|EFU13333.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX1341]
gi|315174733|gb|EFU18750.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX1346]
gi|315578978|gb|EFU91169.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0630]
Length = 398
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 176 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 229
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 230 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 279
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 280 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 330
Query: 193 VNLILEES 200
E+
Sbjct: 331 AIQPFEDC 338
>gi|261341015|ref|ZP_05968873.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterobacter
cancerogenus ATCC 35316]
gi|288316880|gb|EFC55818.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterobacter
cancerogenus ATCC 35316]
Length = 482
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ ++ G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALITGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA++IG +D
Sbjct: 326 DLAREIGTEDFART 339
>gi|254470572|ref|ZP_05083976.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudovibrio sp. JE062]
gi|211960883|gb|EEA96079.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudovibrio sp. JE062]
Length = 400
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y ++ + C + I + +
Sbjct: 15 RVVVAMSGGVDSSVVAGLMKREGYDVVGVTLQLYDHGEAIQRKGACCAGQDIHDARRVAE 74
Query: 69 DSLGEDHILP 78
++L
Sbjct: 75 KLGIPHYVLD 84
>gi|307269910|ref|ZP_07551236.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX4248]
gi|307288320|ref|ZP_07568315.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0109]
gi|306500706|gb|EFM70028.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX0109]
gi|306513700|gb|EFM82306.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX4248]
gi|315028132|gb|EFT40064.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX2137]
gi|315165979|gb|EFU09996.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX1302]
gi|329573455|gb|EGG55063.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis TX1467]
Length = 398
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 176 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAGKLVPYVG 229
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 230 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 279
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 280 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 330
Query: 193 VNLILEES 200
E+
Sbjct: 331 AIQPFEDC 338
>gi|294779637|ref|ZP_06745028.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis PC1.1]
gi|294453294|gb|EFG21705.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecalis PC1.1]
Length = 404
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 182 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAGKLVPYVG 235
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 236 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 285
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 286 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 336
Query: 193 VNLILEES 200
E+
Sbjct: 337 AIQPFEDC 344
>gi|257077442|ref|ZP_05571803.1| thiamine biosynthesis protein [Enterococcus faecalis JH1]
gi|257088075|ref|ZP_05582436.1| thiamine biosynthesis protein [Enterococcus faecalis D6]
gi|256985472|gb|EEU72774.1| thiamine biosynthesis protein [Enterococcus faecalis JH1]
gi|256996105|gb|EEU83407.1| thiamine biosynthesis protein [Enterococcus faecalis D6]
Length = 404
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 182 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAGKLVPYVG 235
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 236 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 285
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 286 NGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 336
Query: 193 VNLILEES 200
E+
Sbjct: 337 AIQPFEDC 344
>gi|170289597|ref|YP_001739835.1| PP-loop domain-containing protein [Thermotoga sp. RQ2]
gi|170177100|gb|ACB10152.1| PP-loop domain protein [Thermotoga sp. RQ2]
Length = 268
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ IK +++FSGG DS+ A + L+ D + E+E + I
Sbjct: 8 SEAIKSKKKLVVMFSGGVDSTLLAKLAYEALGKNAVALTIDSPVIPRKEIEEAKNLANLI 67
Query: 61 -VELMPKWKDSLGEDHIL 77
+ + L H++
Sbjct: 68 GIRHEFIELNELKSRHLI 85
>gi|67458888|ref|YP_246512.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia felis URRWXCal2]
gi|75536671|sp|Q4UM73|MNMA_RICFE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|67004421|gb|AAY61347.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia felis URRWXCal2]
Length = 365
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 1 MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60
Query: 60 IVELMPKWKDSLGEDHILP 78
I + ++L
Sbjct: 61 IYDAKMVANKLGIPHYVLD 79
>gi|332716432|ref|YP_004443898.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Agrobacterium sp. H13-3]
gi|325063117|gb|ADY66807.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Agrobacterium sp. H13-3]
Length = 402
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 55/197 (27%), Gaps = 28/197 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y V C + I + +
Sbjct: 18 RIVVAMSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 77
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 78 TLGIPHYVLD---YEARFRETVINPFAEAYAMGETPIPCVACNQTVKFADLLATAQELGA 134
Query: 129 TNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHT-----------P 171
+ G Y R + + RA+ I+ + + P
Sbjct: 135 DALATGH-------YIRSRPNPVAGQPGRRALYRPIDSDRDQSWFLFATTQEQIDYLRFP 187
Query: 172 LMWLKKYETWKLAQDIG 188
L L K ET LA+D+G
Sbjct: 188 LGGLSKAETRALAEDMG 204
>gi|146421465|ref|XP_001486678.1| hypothetical protein PGUG_00055 [Meyerozyma guilliermondii ATCC
6260]
gi|146387799|gb|EDK35957.1| hypothetical protein PGUG_00055 [Meyerozyma guilliermondii ATCC
6260]
Length = 416
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ K + L +SGG D+S L+W L++ V + GQ E + +
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQEEDFEAAEKKALA 52
>gi|15669834|ref|NP_248648.1| hypothetical protein MJ_1638 [Methanocaldococcus jannaschii DSM
2661]
gi|38503296|sp|Q59032|Y1638_METJA RecName: Full=Uncharacterized protein MJ1638
gi|1500538|gb|AAB99659.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 260
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
I K P A++ FSGG DSST A FD V+ +S
Sbjct: 59 IDKKPKAVVAFSGGVDSSTSAIIAKQIFD-VKAVS 92
>gi|188997246|ref|YP_001931497.1| Argininosuccinate synthase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932313|gb|ACD66943.1| Argininosuccinate synthase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 399
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
+L +SGG D+S + W DR V T + D GQ ++ E+E + + ++
Sbjct: 1 MKKRVVLAYSGGLDTSVIVRWLTDRGFEVITYTADVGQGEELSEIEEKAKRAGAVKAIID 60
Query: 66 KWKDSLGEDHILPLAILGDI 85
+ D+ +PL G +
Sbjct: 61 DINEEFARDYCMPLMRAGAL 80
>gi|84516171|ref|ZP_01003531.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Loktanella vestfoldensis SKA53]
gi|84509867|gb|EAQ06324.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Loktanella vestfoldensis SKA53]
Length = 379
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C + I + +
Sbjct: 20 RVVVAMSGGVDSSVVAAKLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 79
Query: 69 DSLGEDHILP 78
+ ++L
Sbjct: 80 EMGFPHYVLD 89
>gi|310798192|gb|EFQ33085.1| arginosuccinate synthase [Glomerella graminicola M1.001]
Length = 412
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ + L +SGG D+ST L+W LD+ V + GQ E + +K +
Sbjct: 1 MSKGTVCLAYSGGLDTSTILAWLLDQGYEVVAYIANVGQ----EEDWAAVEKKALQMGAK 56
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNV 94
K E ++ + ++ ++
Sbjct: 57 KMIIDDLEREMVEDLCFKAVRVNAQYEDT 85
>gi|288930774|ref|YP_003434834.1| GMP synthase, large subunit [Ferroglobus placidus DSM 10642]
gi|288893022|gb|ADC64559.1| GMP synthase, large subunit [Ferroglobus placidus DSM 10642]
Length = 304
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 61/188 (32%), Gaps = 33/188 (17%)
Query: 10 SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSS C A DR+ + D G + E E V + + +
Sbjct: 23 KAIIALSGGVDSSVCAVLAYKAIGDRLIPVFVDTGLMREGEPERVKEVFGHMNLVFIDAR 82
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D + + + + + +F+ +A G
Sbjct: 83 DE----------FFKALKGVTDPEEKRKIVGE-------------LFVRIFEKVAEEKGA 119
Query: 129 TNIVIGVCETDYSGYPDC--RHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
++ G + YPD I++ + V PL L K E ++A+
Sbjct: 120 EYLIQG------TIYPDIIESQGGIKSHHNVGGFPTKYKFKKVIEPLRELYKDEVREIAR 173
Query: 186 DIGGQDLV 193
+G + +
Sbjct: 174 YLGLPEEI 181
>gi|126736443|ref|ZP_01752184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter sp. CCS2]
gi|126713981|gb|EBA10851.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseobacter sp. CCS2]
Length = 379
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C + I + +
Sbjct: 20 RVVVAMSGGVDSSVVAAKLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 79
Query: 69 DSLGEDHILP 78
+ ++L
Sbjct: 80 EMGFPHYVLD 89
>gi|307700537|ref|ZP_07637571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mobiluncus mulieris FB024-16]
gi|307614258|gb|EFN93493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mobiluncus mulieris FB024-16]
Length = 394
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 14/134 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL----ECRLCVRKKIVE 62
+ ++ SGG DS+ + L++ V + + E L +K+
Sbjct: 1 MSKKVIIGLSGGVDSAVAAARLLEQGYDVHAFFMKLEESGRDEENNPTAQALADARKVAA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-NIIF-LVFAA 120
+ + ++ G I+ PN V R N +F +
Sbjct: 61 YLGIPPEKFHVWELVDRFERGVIT------PFVEAYASGLTPNPCV--RCNRVFKFGYVV 112
Query: 121 TLAYRLGITNIVIG 134
A R G + G
Sbjct: 113 ERALREGFDYVATG 126
>gi|148263558|ref|YP_001230264.1| tRNA-specific 2-thiouridylase MnmA [Geobacter uraniireducens Rf4]
gi|205816712|sp|A5GE36|MNMA_GEOUR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|146397058|gb|ABQ25691.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter uraniireducens Rf4]
Length = 375
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY 42
K ++ SGG DSS + + V +S DY
Sbjct: 4 NNKRKRVVIAMSGGVDSSVAAALLKEEGHEVIGISMQVWDY 44
>gi|262306097|gb|ACY45641.1| gln amidotransferase [Pedetontus saltator]
Length = 198
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 8 APSALLLFSGGQDSSTC---LSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKKIVE 62
LLL SGG DS+ C L AL D+V + D Y ++++ + + + K +
Sbjct: 43 NSKVLLLVSGGVDSTVCGALLHKALPE-DQVIAVHIDNGYMRKHESQ-KVEQSLAKVGLR 100
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK 92
L + + + + T+
Sbjct: 101 LRVIHAAHTFSNATTTIPVDKKEGGGARTR 130
>gi|148976604|ref|ZP_01813291.1| thiamine biosynthesis protein ThiI [Vibrionales bacterium SWAT-3]
gi|145963955|gb|EDK29213.1| thiamine biosynthesis protein ThiI [Vibrionales bacterium SWAT-3]
Length = 482
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 25/184 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS + R +V F+ G K++ + S
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVAHYLWNKYGSS 234
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ + + ++ + ++D + V R +F+ +A +L I +
Sbjct: 235 AKVKFISVDFEPVVA------EILENVEDGQMG--VVLKR--MFMRAGGMVADKLKIEAL 284
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G S + + ++ + + PL+ K + LA+ IG +D
Sbjct: 285 VTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIIDLARTIGTED 335
Query: 192 LVNL 195
+
Sbjct: 336 FAKV 339
>gi|118579504|ref|YP_900754.1| thiamine biosynthesis protein [Pelobacter propionicus DSM 2379]
gi|118502214|gb|ABK98696.1| thiamine biosynthesis protein [Pelobacter propionicus DSM 2379]
Length = 335
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS + ++ VE +SF
Sbjct: 1 MKRKALALFSGGLDSILAVRLMQEQGIEVEAVSF 34
>gi|283784242|ref|YP_003364107.1| thiamine biosynthesis protein ThiI [Citrobacter rodentium ICC168]
gi|282947696|emb|CBG87251.1| thiamine biosynthesis protein ThiI [Citrobacter rodentium ICC168]
Length = 482
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRYGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
+A++IG +D
Sbjct: 326 NIAREIGTEDFART 339
>gi|90410909|ref|ZP_01218923.1| thiamine biosynthesis protein ThiI [Photobacterium profundum 3TCK]
gi|90328122|gb|EAS44433.1| thiamine biosynthesis protein ThiI [Photobacterium profundum 3TCK]
Length = 482
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHF 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K S + + + ++ + K+ + + V R +F+ A +A
Sbjct: 227 LWKKYGSSAKVKFISIDFEPVVA------EILEKVDNGQMG--VVLKR--MFMRAAGQVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI +V G S + + + + + PL+ K + +
Sbjct: 277 ERYGIQALVTGEALGQVSS---------QTLTNLRMIDNVTDSLILRPLINWDKEDIIDI 327
Query: 184 AQDIGGQDL 192
A++IG ++
Sbjct: 328 ARNIGTEEF 336
>gi|54308005|ref|YP_129025.1| thiamine biosynthesis protein ThiI [Photobacterium profundum SS9]
gi|81615455|sp|Q6LU02|THII_PHOPR RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|46912431|emb|CAG19223.1| Putative thiamin biosynthesis protein, ThiI [Photobacterium
profundum SS9]
Length = 482
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHF 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K S + + + ++ + K+ + + V R +F+ A +A
Sbjct: 227 LWKKYGSSAKVKFISIDFEPVVA------EILEKVDNGQMG--VVLKR--MFMRAAGQVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI +V G S + + + + + PL+ K + +
Sbjct: 277 ERYGIQALVTGEALGQVSS---------QTLTNLRMIDNVTDSLILRPLINWDKEDIIDI 327
Query: 184 AQDIGGQDL 192
A++IG ++
Sbjct: 328 ARNIGTEEF 336
>gi|222053549|ref|YP_002535911.1| thiamine biosynthesis protein [Geobacter sp. FRC-32]
gi|221562838|gb|ACM18810.1| thiamine biosynthesis protein [Geobacter sp. FRC-32]
Length = 335
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL L SGG DS+ + LD+ VE L+F
Sbjct: 1 MQKKALALLSGGLDSTLAVKVMLDQGIAVEALNF 34
>gi|296242462|ref|YP_003649949.1| thiamine biosynthesis protein [Thermosphaera aggregans DSM 11486]
gi|296095046|gb|ADG90997.1| thiamine biosynthesis protein [Thermosphaera aggregans DSM 11486]
Length = 381
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 30/180 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPKWK 68
++LFSGG DS+ A+ R R+ + D Y + +E + K + E +P
Sbjct: 176 VVLFSGGVDSALASILAVKRGVRIIPVFIDMSPYWS--SMAVERAMEGLKLVAEKIPWNT 233
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
P + + ++ + T A+ +A +
Sbjct: 234 LKAYIVRNTPRILANA--------QIPLRYRCLACKAT--------MYKIASLVAEKENC 277
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + ++ + I + PL+++ K E ++ G
Sbjct: 278 DFIITGESLGQVAS---QTPSNLKTLTGLI------DKLIMRPLIFMDKEEIIDASRKTG 328
>gi|325111009|ref|YP_004272077.1| argininosuccinate synthase [Planctomyces brasiliensis DSM 5305]
gi|324971277|gb|ADY62055.1| argininosuccinate synthase [Planctomyces brasiliensis DSM 5305]
Length = 406
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+L +SGG D+S + W LD+ V L D GQ
Sbjct: 2 SKEKVILAYSGGLDTSVLVGWLLDKGYEVHCLYVDLGQ 39
>gi|255534090|ref|YP_003094462.1| argininosuccinate synthase [Pedobacter heparinus DSM 2366]
gi|255347074|gb|ACU06400.1| argininosuccinate synthase [Pedobacter heparinus DSM 2366]
Length = 397
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L FSGG D S C+ A DR V ++ + G + EL+ +
Sbjct: 1 MKKKVVLAFSGGLDTSFCCIYLAQDRGLEVHSVIVNTGGFSDEELKEIEKRAYALGVASH 60
Query: 66 KWKDS 70
D
Sbjct: 61 AVVDE 65
>gi|227529160|ref|ZP_03959209.1| argininosuccinate synthase [Lactobacillus vaginalis ATCC 49540]
gi|227350923|gb|EEJ41214.1| argininosuccinate synthase [Lactobacillus vaginalis ATCC 49540]
Length = 421
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
M DI +L +SGG D+S ++W ++ V D G
Sbjct: 1 MEDIQMTKEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG 43
>gi|149203838|ref|ZP_01880807.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseovarius sp. TM1035]
gi|149142955|gb|EDM30997.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseovarius sp. TM1035]
Length = 383
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAHLAAEGYDVVGVTLQLYDHGAALAKKGACCAGVDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 82 EMGFPHYVLD---YENIFRDAVIDEFADSYLAGATP---VP 116
>gi|291240188|ref|XP_002740001.1| PREDICTED: argininosuccinate synthetase 1-like [Saccoglossus
kowalevskii]
Length = 414
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
+ + +L +SGG D+S L W ++ V + GQ ++ R K
Sbjct: 1 MSDKKTVVLAYSGGLDTSCILVWLKEQGYDVIAFMANLGQVDEDFDAAREKAIK 54
>gi|162447421|ref|YP_001620553.1| tRNA-specific 2-thiouridylase MnmA [Acholeplasma laidlawii PG-8A]
gi|205810979|sp|A9NFP7|MNMA_ACHLI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|161985528|gb|ABX81177.1| tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
[Acholeplasma laidlawii PG-8A]
Length = 375
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 22/197 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-------DYGQRNKVELECRLCVRKK 59
L+ SGG DSS L + VE + + R L C ++K
Sbjct: 1 MKKKVLIGLSGGVDSSVAALILLQQGYDVEAVFMRNWDSATNMDFRGNPTLYDETCEQEK 60
Query: 60 IVELMPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ K + LG H + + + + + + + N PN V N I
Sbjct: 61 DYQDALKVANKLGIKLHRVD--FIHEYWDRVFSYFID-EYEKNRTPNPDVLCNNEIKFKA 117
Query: 119 AATLAYRLGITNIVIGVCET-DYSGYPDCRHDTIRAIET-------AINLGMESHVTVHT 170
+ + I +G D++G D IRA+++ L E V
Sbjct: 118 FIDYSEKFKPDYIAMGHYAQIDHTG--D-EPKLIRAVDSNKDQTYFLSQLKTEQLRNVLF 174
Query: 171 PLMWLKKYETWKLAQDI 187
P+ L K E ++A++
Sbjct: 175 PIGNLPKSEVRRIAKEH 191
>gi|148269543|ref|YP_001244003.1| tRNA-specific 2-thiouridylase MnmA [Thermotoga petrophila RKU-1]
gi|166235088|sp|A5IJQ4|MNMA_THEP1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|147735087|gb|ABQ46427.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga petrophila RKU-1]
Length = 358
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DS+ L L V+ + E R ++KK+ D++
Sbjct: 5 VALSGGVDSAVALYLLLKEGHEVKAFHMK---TKEDEFFIRKEIKKKVCCSPSDTADAMR 61
Query: 73 EDHIL 77
H L
Sbjct: 62 IAHFL 66
>gi|118595168|ref|ZP_01552515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylophilales bacterium HTCC2181]
gi|118440946|gb|EAV47573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylophilales bacterium HTCC2181]
Length = 369
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 23/137 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELECRLCVR 57
K S ++ SGG DS+ D+ V L +Y + L+
Sbjct: 2 KGESIVVGLSGGVDSAVTAWLLKDQGYDVTALFMKNWEDDDEDEYCSSKQDLLDAIAVAE 61
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
K V++ ++ + L I G + + ++ + FL
Sbjct: 62 KIGVDIEVVNFAKEYKEKVFSLFIDGLKTGITPNPDILCNSEIKFDA----------FLN 111
Query: 118 FAATLAYRLGITNIVIG 134
A LG I G
Sbjct: 112 HALA----LGADKIATG 124
>gi|326390968|ref|ZP_08212518.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter ethanolicus JW 200]
gi|325993010|gb|EGD51452.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter ethanolicus JW 200]
Length = 376
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+KK ++ SGG DSS ++ V ++
Sbjct: 13 MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVT 47
>gi|256752949|ref|ZP_05493777.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter ethanolicus CCSD1]
gi|256748170|gb|EEU61246.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter ethanolicus CCSD1]
Length = 376
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+KK ++ SGG DSS ++ V ++
Sbjct: 13 MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVT 47
>gi|205815331|sp|B0K584|MNMA1_THEPX RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
Length = 364
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+KK ++ SGG DSS ++ V ++
Sbjct: 1 MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVT 35
>gi|205815324|sp|B0KC14|MNMA1_THEP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
Length = 364
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+KK ++ SGG DSS ++ V ++
Sbjct: 1 MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVT 35
>gi|171464062|ref|YP_001798175.1| Argininosuccinate synthase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229889892|sp|B1XRS6|ASSY_POLNS RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|171193600|gb|ACB44561.1| Argininosuccinate synthase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 410
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ A+L +SGG D+S L W D + + T + D+GQ ++E ++ I
Sbjct: 1 MSDIKKAVLAYSGGLDTSVILKWLQDTYGCEIVTFTADFGQGEELEPARAKALQFGI 57
>gi|156741610|ref|YP_001431739.1| PP-loop domain-containing protein [Roseiflexus castenholzii DSM
13941]
gi|156232938|gb|ABU57721.1| PP-loop domain protein [Roseiflexus castenholzii DSM 13941]
Length = 278
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 67/194 (34%), Gaps = 39/194 (20%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
+ I+++ SAL+ FSGG DS+ L A D +R + D + ELE +
Sbjct: 12 LQAILREIGSALIAFSGGVDSTLLLKVAHDTLGERAIAATADSETYPREELEQARALATL 71
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
I G HI+ H + + L P
Sbjct: 72 I-----------GCRHIVVCTNELSDEHYARNQPDRCYYCKRTLFTELQP---------- 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKK 177
LA LG+ I+ G D + R A+E V +PL+ L K
Sbjct: 111 --LAAELGVAAILYGAMADDIGTH---RPGHRAAME----------FAVRSPLIEAGLGK 155
Query: 178 YETWKLAQDIGGQD 191
E +LA+ +G +
Sbjct: 156 QEIRELARRLGLPN 169
>gi|167039428|ref|YP_001662413.1| tRNA-specific 2-thiouridylase MnmA [Thermoanaerobacter sp. X514]
gi|300915481|ref|ZP_07132794.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X561]
gi|307725247|ref|YP_003904998.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X513]
gi|166853668|gb|ABY92077.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X514]
gi|300888541|gb|EFK83690.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X561]
gi|307582308|gb|ADN55707.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X513]
Length = 376
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+KK ++ SGG DSS ++ V ++
Sbjct: 13 MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVT 47
>gi|78776387|ref|YP_392702.1| asparagine synthase, glutamine-hydrolyzing [Sulfurimonas
denitrificans DSM 1251]
gi|78496927|gb|ABB43467.1| asparagine synthase (glutamine-hydrolysing) [Sulfurimonas
denitrificans DSM 1251]
Length = 583
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 14 LFSGGQDSS--TCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELMPKWKDS 70
L SGG DSS T L A +V T S Y ++ EL + I + ++K S
Sbjct: 250 LLSGGLDSSFITALY-AKKSKHKVHTFSIGYDEHKHYCELGFAKAASEYIGTIHHEYKIS 308
Query: 71 LGE 73
E
Sbjct: 309 KDE 311
>gi|82617281|emb|CAI64186.1| probable thiamine biosynthesis protein [uncultured archaeon]
Length = 404
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 53/181 (29%), Gaps = 32/181 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL----ECRLCVRKKIVELMPKW 67
+ L SGG DS + R V L FD +E + R + I L
Sbjct: 198 IALVSGGIDSPVAAWMLMRRGAEVIPLYFD------LEEFTDPKSRELAEQSINSLFEWS 251
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + A+L +I+ + + + + +A +
Sbjct: 252 YSDMTAYRVPYGAVLSEIASHCEPRITCVICKR-------------MMYRIGTLVAEKEA 298
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + ++ PL+ + K E A I
Sbjct: 299 ACGIVTGSSLGQVAS---------QTSQNMFAEIHGLGMPIYHPLIGMDKREIIDRAIRI 349
Query: 188 G 188
G
Sbjct: 350 G 350
>gi|304321619|ref|YP_003855262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Parvularcula bermudensis HTCC2503]
gi|303300521|gb|ADM10120.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Parvularcula bermudensis HTCC2503]
Length = 409
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVEL 63
+ K ++ SGG DSS + V ++ Y + + C + I +
Sbjct: 21 LPKGARIVVAMSGGVDSSVTAALVHRAGYDVVGITLQLYDHGVAIAKKGACCAGQDIADA 80
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++L D S+ ++ A P
Sbjct: 81 RAVADRLGIPHYVLD---YEDRFGDSVMQDFADTYLAGATP 118
>gi|167036708|ref|YP_001664286.1| tRNA-specific 2-thiouridylase MnmA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115132|ref|YP_004185291.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166855542|gb|ABY93950.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928223|gb|ADV78908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 376
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+KK ++ SGG DSS ++ V ++
Sbjct: 13 MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVT 47
>gi|321263400|ref|XP_003196418.1| argininosuccinate synthase [Cryptococcus gattii WM276]
gi|317462894|gb|ADV24631.1| argininosuccinate synthase, putative [Cryptococcus gattii WM276]
Length = 429
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M +K +L +SGG D+S L W +++ V D GQ + + E K
Sbjct: 1 MVATGEKKGKVILAYSGGLDTSCILLWLIEQGYEVVAYMADVGQ--EEDFEAARAKAMKC 58
Query: 61 VELMPKWKD 69
+ D
Sbjct: 59 GAVGFHLAD 67
>gi|251794097|ref|YP_003008828.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. JDR-2]
gi|247541723|gb|ACS98741.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. JDR-2]
Length = 475
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 59/203 (29%), Gaps = 43/203 (21%)
Query: 6 KKAPSALLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
K + SGG DS L A V ++G R ++
Sbjct: 23 SKGDRIVAAVSGGPDSMALLHLLWQAARQEQLTVIAAHVNHG--------FRKDASRQEA 74
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E++ ++ + LG + ++ + + + Q + F
Sbjct: 75 EVVRQYAEKLGVP-----FEMIELDMPAYIEETGINAQSAAREKRY---------AFLHE 120
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI----------RAIETAINLGMESHVTVHTP 171
A + G + I + D + +T+ + E +V + P
Sbjct: 121 TAVKYGASAIALAHHADDQA-------ETVLMRVIRGAGLTGLAGMAPKRKEKNVELIRP 173
Query: 172 LMWLKKYETWKLAQDIGGQDLVN 194
L+ + K + + + ++
Sbjct: 174 LLRMNKSDIVRYCSERDVPYCLD 196
>gi|330993151|ref|ZP_08317089.1| tRNA-specific 2-thiouridylase mnmA [Gluconacetobacter sp. SXCC-1]
gi|329759921|gb|EGG76427.1| tRNA-specific 2-thiouridylase mnmA [Gluconacetobacter sp. SXCC-1]
Length = 376
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 7/131 (5%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
+A L+ SGG DSS + +D V + Y R + C + +
Sbjct: 8 NQAMRILVAMSGGVDSSVVAARLVDEGHEVIGATLQLYDSREST--KKGACCAGRDIHDA 65
Query: 65 PKWKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ D LG H ++ H S+ A P V + +A
Sbjct: 66 RRVADRLGIPHYVID---AERRFHDSVIGTFADAYAAGETPVPCVACNQGVKFTDLLGMA 122
Query: 124 YRLGITNIVIG 134
LG+ + G
Sbjct: 123 RELGVDAMATG 133
>gi|302335768|ref|YP_003800975.1| thiamine biosynthesis/tRNA modification protein ThiI [Olsenella uli
DSM 7084]
gi|301319608|gb|ADK68095.1| thiamine biosynthesis/tRNA modification protein ThiI [Olsenella uli
DSM 7084]
Length = 410
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A + L S G DS R + F R + + L
Sbjct: 172 PVGTAGKVVTLLSSGFDSPVATWMVGRRGATCVPVHFS--GRPMTPDTSEYLTQDIVRAL 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
P +G +++P + + +++ + + ++ R + A +A
Sbjct: 230 AP--SGVVGRLYVVPFG--------ARQREISLAVPQSLRIISY---R-RVMFSVAERIA 275
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
G IV G + D I A+ ++L V PL+ K E +
Sbjct: 276 QLEGAKAIVTGESLGQVAS---QTLDNIAAVNEVVSL------PVLRPLIGSDKQEIMRR 326
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 327 AEQIGTYDI 335
>gi|257463047|ref|ZP_05627449.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. D12]
Length = 333
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ AL LFSGG DS+ + ++ V L+F
Sbjct: 1 MVSRIKALALFSGGLDSALAIKIVQEQGIEVIALNF 36
>gi|134111374|ref|XP_775603.1| hypothetical protein CNBD5570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258265|gb|EAL20956.1| hypothetical protein CNBD5570 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 429
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
M +K +L +SGG D+S L W +++ V D GQ E
Sbjct: 1 MVATGEKKGKVILAYSGGLDTSCILLWLIEQGYEVVAYMADVGQEEDFEAARAKA 55
>gi|167807|gb|AAA33213.1| GMP synthetase [Dictyostelium discoideum]
Length = 718
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L+L SGG DS+ C + + V L D G
Sbjct: 266 SNKKVLVLVSGGVDSTVCAALISKAIGPENVIALHIDNG 304
>gi|66812710|ref|XP_640534.1| GMP synthetase [Dictyostelium discoideum AX4]
gi|161783815|sp|P32073|GUAA_DICDI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|60468534|gb|EAL66537.1| GMP synthetase [Dictyostelium discoideum AX4]
Length = 718
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L+L SGG DS+ C + + V L D G
Sbjct: 266 SNKKVLVLVSGGVDSTVCAALISKAIGPENVIALHIDNG 304
>gi|323343956|ref|ZP_08084183.1| argininosuccinate synthase [Prevotella oralis ATCC 33269]
gi|323095775|gb|EFZ38349.1| argininosuccinate synthase [Prevotella oralis ATCC 33269]
Length = 399
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 55/194 (28%), Gaps = 39/194 (20%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ ++ FSGG D S T + A D V + G + +L+ K
Sbjct: 2 EKKKVVVAFSGGLDTSYTVMKLAQD-GYDVYAACANTGGFSAEQLKNNEANAYK------ 54
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAAT-LA 123
LG + L + + SL + + NN P + R IF A A
Sbjct: 55 -----LGAKAYVTLDVTQEYYEKSLKYMIFGNVMRNNCYPVSVSSER--IFQAIAIARYA 107
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+G I G + G + T L+ E L
Sbjct: 108 KEIGADAIAHG----------------------STGAGNDQIRFDMTFLVMAPGIEIITL 145
Query: 184 AQDIGGQDLVNLIL 197
+D +
Sbjct: 146 TRDHALSRQEEVDY 159
>gi|73669859|ref|YP_305874.1| argininosuccinate synthase [Methanosarcina barkeri str. Fusaro]
gi|119361288|sp|Q469Z8|ASSY_METBF RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|72397021|gb|AAZ71294.1| argininosuccinate synthase [Methanosarcina barkeri str. Fusaro]
Length = 395
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIV--E 62
A L +SGG D+S C+ ++ +D V T+S D GQ + E++ +KI
Sbjct: 1 MAKKVALAYSGGLDTSVCIPILKEKYGYDEVVTISVDVGQ-PEEEIKRADAKAEKISNKH 59
Query: 63 LMPKWKDSLGEDHILPL 79
K+ +D++ PL
Sbjct: 60 YTIDAKEEFVKDYVFPL 76
>gi|58266460|ref|XP_570386.1| argininosuccinate synthase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57226619|gb|AAW43079.1| argininosuccinate synthase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 429
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
M +K +L +SGG D+S L W +++ V D GQ E
Sbjct: 1 MVATGEKKGKVILAYSGGLDTSCILLWLIEQGYEVVAYMADVGQEEDFEAARAKA 55
>gi|114288|sp|P13257|ASSY_METBA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|149818|gb|AAA72677.1| argininosuccinate synthetase [Methanosarcina barkeri]
Length = 396
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIV--E 62
A L +SGG D+S C+ ++ +D V T+S D GQ + E++ +KI
Sbjct: 1 MAKKVALAYSGGLDTSVCIPILKEKYGYDEVVTISVDVGQ-PEEEIKRADAKAEKISNKH 59
Query: 63 LMPKWKDSLGEDHILPL 79
K+ +D++ PL
Sbjct: 60 YTIDAKEEFVKDYVFPL 76
>gi|332521153|ref|ZP_08397611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lacinutrix algicola 5H-3-7-4]
gi|332043246|gb|EGI79443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lacinutrix algicola 5H-3-7-4]
Length = 396
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 1 MKKRVIVGLSGGVDSSVAAYLLKEQGYEVIGL 32
>gi|315054853|ref|XP_003176801.1| argininosuccinate synthase [Arthroderma gypseum CBS 118893]
gi|311338647|gb|EFQ97849.1| argininosuccinate synthase [Arthroderma gypseum CBS 118893]
Length = 415
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ + LL +SGG D+S L+W L++ V D GQ + E + KK+V
Sbjct: 1 MAQNEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQAEDFKEAERKALAVGAKKLV 60
>gi|294782620|ref|ZP_06747946.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. 1_1_41FAA]
gi|294481261|gb|EFG29036.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. 1_1_41FAA]
Length = 334
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+K+ AL LFSGG DS+ + D+ V L+F
Sbjct: 1 MKEKIKALALFSGGLDSALAIKVVQDQGVEVIGLNF 36
>gi|281411738|ref|YP_003345817.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga naphthophila RKU-10]
gi|281372841|gb|ADA66403.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga naphthophila RKU-10]
Length = 358
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DS+ L L V+ + E R ++KK+ D++
Sbjct: 5 VALSGGVDSAVALYLLLKEGHEVKAFHMK---TKEDEFFIRKEIKKKVCCSPSDTADAMR 61
Query: 73 EDHIL 77
H L
Sbjct: 62 IAHFL 66
>gi|150399831|ref|YP_001323598.1| argininosuccinate synthase [Methanococcus vannielii SB]
gi|150012534|gb|ABR54986.1| Argininosuccinate synthase [Methanococcus vannielii SB]
Length = 397
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 34/196 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A+L +SGG D+S CL D++ +V +++ D GQ + +L+ KK+ L
Sbjct: 2 QEKIAVLAYSGGLDTSCCLKLLEDKYNYKVVSVAVDVGQ-PEDDLKEPEEKAKKLGVLKH 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
D+ E + I I ++L + + R +I + A LA
Sbjct: 61 YTIDAKEEFAV--DYIFRAIKANALYEGYPLSTAL---------ARPLIAIKIAE-LAKE 108
Query: 126 LGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL--MWLKKYE 179
+G I G C E+ + + + P+ + L + E
Sbjct: 109 IGADAISHG-----------CTGKGNDQF--RFESVMR-AKAPEIEIIAPIRDLNLTRTE 154
Query: 180 TWKLAQDIGGQDLVNL 195
+ A++ G V+L
Sbjct: 155 EIQYAKEKGIPIPVDL 170
>gi|67522853|ref|XP_659487.1| hypothetical protein AN1883.2 [Aspergillus nidulans FGSC A4]
gi|40745892|gb|EAA65048.1| hypothetical protein AN1883.2 [Aspergillus nidulans FGSC A4]
Length = 468
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ FSGG D+S L W +D V + D GQ E + K +
Sbjct: 8 VAFSGGLDTSVILKWLIDEGYEVVAFTADVGQ----EEDFAAIKEKAL 51
>gi|325958300|ref|YP_004289766.1| Queuosine synthesis-like protein [Methanobacterium sp. AL-21]
gi|325329732|gb|ADZ08794.1| Queuosine synthesis-like protein [Methanobacterium sp. AL-21]
Length = 198
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A +L+SGG+DSS VE ++ +YG
Sbjct: 2 KACVLYSGGKDSSLMAFILNKLGYDVELVTVNYG 35
>gi|300855514|ref|YP_003780498.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium ljungdahlii DSM 13528]
gi|300435629|gb|ADK15396.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium ljungdahlii DSM 13528]
Length = 358
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MNKKVVVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|298384831|ref|ZP_06994390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 1_1_14]
gi|298261975|gb|EFI04840.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 1_1_14]
Length = 362
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 28/137 (20%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MKERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAARMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LV 117
+ + +K+++ ++ I + + PN V N +F
Sbjct: 59 YVADERIPFKETIVKNFI-------------------DEYKQGRTPNPCVMC-NPLFKFR 98
Query: 118 FAATLAYRLGITNIVIG 134
A A +L I G
Sbjct: 99 VLAEWADKLDCAYIATG 115
>gi|253570358|ref|ZP_04847767.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 1_1_6]
gi|205814939|sp|Q8A0Y3|MNMA3_BACTN RecName: Full=tRNA-specific 2-thiouridylase mnmA 3
gi|251840739|gb|EES68821.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 1_1_6]
Length = 362
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 28/137 (20%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MKERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAARMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LV 117
+ + +K+++ ++ I + + PN V N +F
Sbjct: 59 YVADERIPFKETIVKNFI-------------------DEYKQGRTPNPCVMC-NPLFKFR 98
Query: 118 FAATLAYRLGITNIVIG 134
A A +L I G
Sbjct: 99 VLAEWADKLDCAYIATG 115
>gi|325479846|gb|EGC82931.1| argininosuccinate synthase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 410
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
++K+A +L +SGG D+S W + V +S D GQ + K +
Sbjct: 7 QMLKEANKVILAYSGGLDTSVLSYWLKENGASEVICVSVDLGQVENPD----KLKEKALA 62
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
K+ + ED + + + +N+
Sbjct: 63 AGASKFYNVNVEDEFIDNYAYKSLLAGAKYENI 95
>gi|218131789|ref|ZP_03460593.1| hypothetical protein BACEGG_03410 [Bacteroides eggerthii DSM
20697]
gi|217986092|gb|EEC52431.1| hypothetical protein BACEGG_03410 [Bacteroides eggerthii DSM
20697]
Length = 357
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG--QRNKVELECRLCVRKKIV 61
+K LL SGG DSS LD V ++F Y R + + R + +
Sbjct: 8 MKSKERVLLGMSGGTDSSVAAMRLLDAGYEVTGVTFRFYEVDGRTEYLDDARALAARLGI 67
Query: 62 ELMPKWKDSLGEDHIL 77
E + L + I+
Sbjct: 68 EHVTYDAQELFRERII 83
>gi|239616502|ref|YP_002939824.1| argininosuccinate synthase [Kosmotoga olearia TBF 19.5.1]
gi|239505333|gb|ACR78820.1| argininosuccinate synthase [Kosmotoga olearia TBF 19.5.1]
Length = 428
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
K +L +SGG D+S L W ++ V + GQR
Sbjct: 2 KKEKVILAYSGGLDTSVILKWLSEKGFEVIAFVANVGQR 40
>gi|88858568|ref|ZP_01133210.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas tunicata D2]
gi|88820185|gb|EAR29998.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas tunicata D2]
Length = 485
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R L F+ G + K
Sbjct: 176 PLPTQEDVLSLMSGGFDSGVATYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASY 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +++ + + + +NV V R + + + +A
Sbjct: 229 F-LWDKYSSTHKVKFISVDFEPVVAEILENVENSQMG------VVLKR--MMMRAGSLVA 279
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + + + + PL+ K E +
Sbjct: 280 KQFGIDALVTGESLGQVSS---------QTLANLNVIDQVTDTLILRPLIQYDKQEIINI 330
Query: 184 AQDIGGQDL 192
A+ IG ++
Sbjct: 331 ARQIGTSEM 339
>gi|312070856|ref|XP_003138339.1| hypothetical protein LOAG_02754 [Loa loa]
gi|307766493|gb|EFO25727.1| hypothetical protein LOAG_02754 [Loa loa]
Length = 383
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+K+ + SGG DS+ R V +
Sbjct: 1 MKQIRKVVCAISGGVDSAVSAYLLKKRGFDVIGVH 35
>gi|225011775|ref|ZP_03702213.1| Argininosuccinate synthase [Flavobacteria bacterium MS024-2A]
gi|225004278|gb|EEG42250.1| Argininosuccinate synthase [Flavobacteria bacterium MS024-2A]
Length = 396
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 15/130 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K +L +SGG D+S L V +S + G ++ E++ ++ + K
Sbjct: 2 KHSKLVLAYSGGLDTSYSLRKLSKEGYEVHAVSINTGGFSENEIKDIEEKSYQMGAHVYK 61
Query: 67 WKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++L I+ I G++ + T +++ + V T A
Sbjct: 62 NINALDTFYHKIVKYLIFGNVLRN-NTYPLSVSAERIIQAIEIV------------TYAK 108
Query: 125 RLGITNIVIG 134
+G I G
Sbjct: 109 AIGAKYIAHG 118
>gi|34558441|ref|NP_908256.1| argininosuccinate synthase [Wolinella succinogenes DSM 1740]
gi|44887688|sp|Q7M7P6|ASSY_WOLSU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|34484160|emb|CAE11156.1| ARGININOSUCCINATE SYNTHASE CITRULLINE--ASPARTATELIGASE [Wolinella
succinogenes]
Length = 404
Score = 43.3 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ KK +L +SGG D+S L W +++ V T + D GQ +VE I E
Sbjct: 1 MSKKINKIVLAYSGGLDTSVILKWLQEQYQCEVVTFTADIGQGEEVEPARAKAKLLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPL 79
+ K+ D++ P+
Sbjct: 61 ENIFIKDLKEEFVRDYVFPM 80
>gi|313905756|ref|ZP_07839115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium cellulosolvens 6]
gi|313469362|gb|EFR64705.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium cellulosolvens 6]
Length = 363
Score = 43.3 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL 54
+ K + ++ SGG DSS ++ V ++ Q + E ECRL
Sbjct: 1 MSNKDKTVVVGMSGGVDSSVAAYLLKEQGYNVIGVTM---QIWQDESECRL 48
>gi|262306019|gb|ACY45602.1| gln amidotransferase [Ctenolepisma lineata]
Length = 197
Score = 43.3 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG-------QRNKVELECRLCVRK 58
LLL SGG DS+ C + R D+V + D G QR + LE +L +R
Sbjct: 43 NNKVLLLISGGVDSTVCAALLHKALREDQVIAVHIDNGFMRKNESQRVEQSLE-KLGLRI 101
Query: 59 KIVELMPKWKDS 70
K+V+ ++ D
Sbjct: 102 KVVKACHQFYDG 113
>gi|163747144|ref|ZP_02154500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanibulbus indolifex HEL-45]
gi|161379705|gb|EDQ04118.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanibulbus indolifex HEL-45]
Length = 380
Score = 43.3 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + D V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAMLADEGYDVVGVTLQLYDHGAALAKKGACCAGVDIQDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L ++ ++ A P VP
Sbjct: 82 EMGFPHYVLD---YENVFKDAVIDEFADSYLGGATP---VP 116
>gi|156937428|ref|YP_001435224.1| argininosuccinate synthase [Ignicoccus hospitalis KIN4/I]
gi|172044465|sp|A8AA65|ASSY_IGNH4 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|156566412|gb|ABU81817.1| argininosuccinate synthase [Ignicoccus hospitalis KIN4/I]
Length = 396
Score = 43.3 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
+L +SGG D+S ++W ++F V T++ D GQ+ E+E R +
Sbjct: 3 KIVLAYSGGLDTSVAVAWLKEKFGAEVITVTVDVGQKEDFKEIEERAYKAGASKHYLIDA 62
Query: 68 KDSLGEDHILPLAILGDI 85
K+ +I P I +
Sbjct: 63 KEEFVNKYIKPAIIANAL 80
>gi|13472503|ref|NP_104070.1| tRNA-specific 2-thiouridylase MnmA [Mesorhizobium loti MAFF303099]
gi|14023249|dbj|BAB49856.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Mesorhizobium loti MAFF303099]
Length = 378
Score = 43.3 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 47/183 (25%), Gaps = 15/183 (8%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS V ++ Y C + I + +
Sbjct: 1 MSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRAGSCCAGQDIDDARRVSETLGIP 60
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
++L + ++ A P V + A LG +
Sbjct: 61 HYVLD---YEERFRKAVIDPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGADALAT 117
Query: 134 ------GVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKLAQ 185
G + Y R ++ + PL L K + +A+
Sbjct: 118 GHYIRSGANGAHRALY---RPVDADRDQSYFLFATTQAQIDYLRFPLGGLSKPQVRAIAE 174
Query: 186 DIG 188
++G
Sbjct: 175 EMG 177
>gi|326403958|ref|YP_004284040.1| tRNA-specific 2-thiouridylase MnmA [Acidiphilium multivorum AIU301]
gi|325050820|dbj|BAJ81158.1| tRNA-specific 2-thiouridylase MnmA [Acidiphilium multivorum AIU301]
Length = 345
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 10/129 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + C + I +
Sbjct: 2 RVVVAMSGGVDSSVVAGLMHEAGHEVIGVTLQLYDHGAATSRKGACCAGQDIHDARNVAD 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG-R-NIIF-LVFAATLAYR 125
+++ +++ + A + P VP R N LA
Sbjct: 62 RLGIAHYVID---AEAAFRAAVIGDFAESYAEGRTP---VPCVRCNQHLKFGDLLGLARD 115
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 116 LGAEALATG 124
>gi|294084590|ref|YP_003551348.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Puniceispirillum marinum IMCC1322]
gi|292664163|gb|ADE39264.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 419
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 36/126 (28%), Gaps = 4/126 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + D V ++ Y V+ + C I +
Sbjct: 46 RVVVAMSGGVDSSVTAAMLHDEGYEVIGITLQLYDHGVAVQTKGACCAGIDIHDARTVSA 105
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L + ++ A P V + T A LG
Sbjct: 106 RLGIPHYVLD---YESKFRDQVMEDFADSYLRGETPIPCVRCNQTVKFTDLLTTAQELGA 162
Query: 129 TNIVIG 134
+ G
Sbjct: 163 DCLATG 168
>gi|239627765|ref|ZP_04670796.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517911|gb|EEQ57777.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 394
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 65/199 (32%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
I A+LL SGG DS R +++ + F + +K +
Sbjct: 176 PIGTNGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYF-----HAPPYTSERAKQKVVDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ ++ + + I I + + + ++ + A T
Sbjct: 231 NLVARYAGPIMLHVVNFTDIQLYIYDKCPHEELTIIMRRY-------------MMRIAQT 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + G ++ G + T++++ + + V P++ K E
Sbjct: 278 IAGQNGAIGLITGESIGQVAS------QTLQSLAATNEVCT---MPVFRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+++ IG + E+
Sbjct: 329 DVSEKIGTYETSIQPFEDC 347
>gi|160895343|ref|ZP_02076114.1| hypothetical protein CLOL250_02902 [Clostridium sp. L2-50]
gi|156863036|gb|EDO56467.1| hypothetical protein CLOL250_02902 [Clostridium sp. L2-50]
Length = 395
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 35/202 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ + L SGG DS R ++E + F + K +
Sbjct: 175 PVGTNGKGMALLSGGIDSPVATYMIAKRGVQMEAVYF-----HAPPFTSERAKEKVIDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ + ++ + + I + + + + ++ + A
Sbjct: 230 CLVADYAGAIKLHVVNFADVQMAIYDNCPHEELTIIMKRY-------------MIKIAEE 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKY 178
LA R V G S +T +L + + V+ V P + L K
Sbjct: 277 LAKRNDCQCTVTGESIGQVSS------------QTVFSLAVINDVSTLPVFRPCIGLDKQ 324
Query: 179 ETWKLAQDIGGQDLVNLILEES 200
E +++ IG + L E+
Sbjct: 325 EIVDISEKIGTYEASILPYEDC 346
>gi|328949749|ref|YP_004367084.1| NH(3)-dependent NAD(+) synthetase [Marinithermus hydrothermalis DSM
14884]
gi|328450073|gb|AEB10974.1| NH(3)-dependent NAD(+) synthetase [Marinithermus hydrothermalis DSM
14884]
Length = 282
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 40/188 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++ SGG DS+T L+ A+ + V L+ ++ L + + +
Sbjct: 39 KAVVAVSGGVDSATTLALAVRALGPENVHALALP----HRDSRPESLEHARLVAQTFGVA 94
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL--VFAATLAYR 125
+ ++ + + + +++ T ++ + N + R I+ A A
Sbjct: 95 LE------VVDITPMVE-GYAAQTPDLTPHRKGNVMAR----CRMIVLFDKSMAY-HALP 142
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
LG G GY ++ PL L K + W LA+
Sbjct: 143 LG-----TGNKTERLFGY------FT-------WNADDTPP--VNPLGDLYKTQVWALAR 182
Query: 186 DIGGQDLV 193
+G ++V
Sbjct: 183 YLGVPEVV 190
>gi|311105115|ref|YP_003977968.1| methyltransferase [Achromobacter xylosoxidans A8]
gi|310759804|gb|ADP15253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Achromobacter xylosoxidans A8]
Length = 372
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN K ++ SGG DSS + V L
Sbjct: 1 MNQKSTKKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGL 38
>gi|262306045|gb|ACY45615.1| gln amidotransferase [Euperipatoides rowelli]
Length = 197
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKI 60
K L+L SGG DS+ C + + D+V + D G K E E KI
Sbjct: 42 KDNKVLMLVSGGVDSTVCAALLHKALKEDQVIAVHIDNGFMRKKESEQVEKSLNKI 97
>gi|301106576|ref|XP_002902371.1| endoplasmic reticulum-Golgi intermediate compartment protein,
putative [Phytophthora infestans T30-4]
gi|262098991|gb|EEY57043.1| endoplasmic reticulum-Golgi intermediate compartment protein,
putative [Phytophthora infestans T30-4]
Length = 393
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 16/101 (15%)
Query: 146 CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYL 205
CR I A++ A L + H TV + A ++ +L +CY
Sbjct: 104 CRDAHINAMDVAGELQVNMHQTVVKTRLDANGRSISTTADELAKT---DLPAGYCGSCY- 159
Query: 206 GKRDKRYEWGYGCNSCPACYLRQKGW-------MEFKEKYQ 239
R+ G C C C ++ + E ++K Q
Sbjct: 160 ---GTRHPAGKEC--CNTCEEVKEAFIHSDLSLEEAEQKEQ 195
>gi|225848405|ref|YP_002728568.1| argininosuccinate synthase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643412|gb|ACN98462.1| argininosuccinate synthase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 399
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
+L +SGG D+S + W DR V T + D GQ ++ E+E + + ++
Sbjct: 1 MKKRVVLAYSGGLDTSVIVRWLTDRGFEVITYTADVGQGEELSEIEEKALKAGAVKAIID 60
Query: 66 KWKDSLGEDHILPL 79
K+ D+ +PL
Sbjct: 61 DIKEEFARDYCMPL 74
>gi|227364875|ref|ZP_03848921.1| argininosuccinate synthase [Lactobacillus reuteri MM2-3]
gi|325682500|ref|ZP_08162017.1| argininosuccinate synthase [Lactobacillus reuteri MM4-1A]
gi|227070079|gb|EEI08456.1| argininosuccinate synthase [Lactobacillus reuteri MM2-3]
gi|324978339|gb|EGC15289.1| argininosuccinate synthase [Lactobacillus reuteri MM4-1A]
Length = 415
Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
M D I +L +SGG D+S ++W ++ V D G
Sbjct: 1 MEDEIMSKEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG 43
>gi|300868100|ref|ZP_07112736.1| tRNA-specific 2-thiouridylase mnmA [Oscillatoria sp. PCC 6506]
gi|300333898|emb|CBN57914.1| tRNA-specific 2-thiouridylase mnmA [Oscillatoria sp. PCC 6506]
Length = 352
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 41/136 (30%), Gaps = 30/136 (22%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSST + + V L+ GQ C + +V+
Sbjct: 3 KIVVGLSGGVDSSTAAAILHHQGYEVVGLTLWLMKGKGQ----------CCSEGMVDAAQ 52
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRN---IIFLVF 118
+ I+ L S ++ T +P R L +
Sbjct: 53 ICEQLGIPHEIVDSRDLFQASIVDYL------VEGYGAGITPLPCSQCNRTVKFGPMLRY 106
Query: 119 AATLAYRLGITNIVIG 134
A +LGI I G
Sbjct: 107 AR---EKLGIEKIATG 119
>gi|289764880|ref|ZP_06524258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D11]
gi|289716435|gb|EFD80447.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D11]
Length = 333
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + AL LFSGG DS+ + ++ V L+F
Sbjct: 1 MMEKIKALALFSGGLDSALAIKVVQEQGIEVIALNF 36
>gi|262306083|gb|ACY45634.1| gln amidotransferase [Nicoletia meinerti]
Length = 197
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
LLL SGG DS+ C + R D+V + D G
Sbjct: 43 NNKVLLLVSGGIDSTVCAALLHKALREDQVIAVHIDNG 80
>gi|302875322|ref|YP_003843955.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
cellulovorans 743B]
gi|307688175|ref|ZP_07630621.1| thiamine biosynthesis protein ThiI [Clostridium cellulovorans 743B]
gi|302578179|gb|ADL52191.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
cellulovorans 743B]
Length = 386
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS R V ++ F + ++K+++L G
Sbjct: 176 LMLSGGIDSPVAGYLMARRGTEVSSVYF-----HSHPYTSE-RAKEKVIDLAKILASYTG 229
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + ++ L T + R + + TLA R I ++
Sbjct: 230 QMKLYIVPF------TEIQMKIMELCPEDEL--TIIMRR--FMMRVSCTLAERNKIQSVS 279
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +E I + V PL+ + K + +++ +G D
Sbjct: 280 TGESIGQVAS---------QTMEGLIVSTDVADRPVFRPLIAMDKEDIMDISRKVGTYDT 330
Query: 193 VNLILEES 200
L E+
Sbjct: 331 SILPYEDC 338
>gi|148825979|ref|YP_001290732.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittEE]
gi|189030631|sp|A5UC48|THII_HAEIE RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|148716139|gb|ABQ98349.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittEE]
Length = 485
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 60/192 (31%), Gaps = 31/192 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
I L L SGG DS + R RV F+ G V +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLG-----------GVAHEIGVK 221
Query: 63 --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
W+ + +AI + + + V V R + + A+
Sbjct: 222 QMAYHIWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAAS 273
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A R I IV G S + + + + V PL+ K +
Sbjct: 274 KVAQRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQI 324
Query: 181 WKLAQDIGGQDL 192
+A++IG D+
Sbjct: 325 IAMAKEIGTDDI 336
>gi|121710280|ref|XP_001272756.1| argininosuccinate synthase [Aspergillus clavatus NRRL 1]
gi|119400906|gb|EAW11330.1| argininosuccinate synthase [Aspergillus clavatus NRRL 1]
Length = 416
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + FSGG D+S L W +D V + D GQ E +R+K ++L
Sbjct: 1 MSKGKVCVA-FSGGLDTSVILKWLIDEGYEVVAFTADVGQ-----EEDFDAIREKALKLG 54
Query: 65 PKWKDSLG-EDHILPLAILGDISHSSLTKNV 94
+ + + I+ +++ +NV
Sbjct: 55 AVKCEIVDLRREFIEELCFPAIACNAIYENV 85
>gi|83942322|ref|ZP_00954783.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfitobacter sp. EE-36]
gi|83846415|gb|EAP84291.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfitobacter sp. EE-36]
Length = 380
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALARKGACCAGIDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++L ++ ++ A P VP
Sbjct: 82 SMGFPHYVLD---YENVFKDAVIDEFADSYLGGATP---VP 116
>gi|152989960|ref|YP_001355682.1| hypothetical protein NIS_0211 [Nitratiruptor sp. SB155-2]
gi|151421821|dbj|BAF69325.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 329
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + +D+ V L FD G
Sbjct: 5 RALALFSGGLDSLLAMKLIIDQGVDVIGLHFDTG 38
>gi|319954152|ref|YP_004165419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cellulophaga algicola DSM 14237]
gi|319422812|gb|ADV49921.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cellulophaga algicola DSM 14237]
Length = 396
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KKVVVGLSGGVDSSVAAYLLKEQGYEVIGL 31
>gi|317128230|ref|YP_004094512.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cellulosilyticus DSM 2522]
gi|315473178|gb|ADU29781.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cellulosilyticus DSM 2522]
Length = 367
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + K+ ++ SGG DSS +V +
Sbjct: 1 MMNTEKQNIRVVVGMSGGVDSSVAAYLLKQEGYQVIGI 38
>gi|269138338|ref|YP_003295038.1| thiamine biosynthesis ATP pyrophosphatase [Edwardsiella tarda
EIB202]
gi|267983998|gb|ACY83827.1| thiamine biosynthesis ATP pyrophosphatase [Edwardsiella tarda
EIB202]
gi|304558370|gb|ADM41034.1| Thiamine biosynthesis protein ThiI [Edwardsiella tarda FL6-60]
Length = 482
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 60/197 (30%), Gaps = 41/197 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K+ D + V R + + A+ +A
Sbjct: 227 LWNRFGSSHRVRFVAIDFAPVVG------EILEKVDDGQMG--VVLKR--MMVRAASRVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWL 175
R GI +V G A+ + + + + PL+
Sbjct: 277 ERYGIQALVTG-----------------EALGQVSSQTLTNLRLIDGVSDTLVLRPLIAH 319
Query: 176 KKYETWKLAQDIGGQDL 192
K +LA+ IG +D
Sbjct: 320 DKEHIIRLARQIGTEDF 336
>gi|227500390|ref|ZP_03930452.1| argininosuccinate synthase [Anaerococcus tetradius ATCC 35098]
gi|227217453|gb|EEI82772.1| argininosuccinate synthase [Anaerococcus tetradius ATCC 35098]
Length = 407
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
+IIK+A +L +SGG D+S +W + V +S D GQ
Sbjct: 5 EIIKEAKKVILAYSGGLDTSVLTTWLKENGAKEVICVSVDLGQ 47
>gi|189467232|ref|ZP_03016017.1| hypothetical protein BACINT_03617 [Bacteroides intestinalis DSM
17393]
gi|189435496|gb|EDV04481.1| hypothetical protein BACINT_03617 [Bacteroides intestinalis DSM
17393]
Length = 443
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 60/205 (29%), Gaps = 49/205 (23%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + L+ SGG DS L LD E ++ R + + VR E
Sbjct: 14 KLFTREDKILVTLSGGADSVALLRLLLDMGYTCEAAHCNFHLRGDESVRDEMFVR----E 69
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L + L H + +++++++ L
Sbjct: 70 LCLQLVVPLHVQH-------FQTMEEAEKRHISIEMAARELR---------------YAW 107
Query: 123 AYRL----GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVH 169
+L G I + + D + + + G + +
Sbjct: 108 FEQLRLQQGADVIAVAHHKDDS----------VETLLLNLIRGTGINGLLGIRPKNGNIV 157
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVN 194
PL+ L + E + Q+IG + +
Sbjct: 158 RPLLCLDRKEITEYLQEIGQSYVTD 182
>gi|170717619|ref|YP_001784700.1| thiamine biosynthesis protein ThiI [Haemophilus somnus 2336]
gi|189030633|sp|B0UUA1|THII_HAES2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|168825748|gb|ACA31119.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
somnus 2336]
Length = 484
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-ATHEIGVKQMAYH----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK G + +AI + + + + V V R + + A+ +A
Sbjct: 227 --IWKRFSGSHKVRFVAINFEQVVAEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI IV G S + + + + V PL+ K +
Sbjct: 277 QRFGIQAIVTGEALGQVSS---------QTLTNLRLIDEVAESLVLRPLITHDKEQIIAK 327
Query: 184 AQDIGGQDL 192
A++IG +D+
Sbjct: 328 AKEIGTEDI 336
>gi|157376456|ref|YP_001475056.1| thiamine biosynthesis protein ThiI [Shewanella sediminis HAW-EB3]
gi|189030654|sp|A8FYK5|THII_SHESH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|157318830|gb|ABV37928.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
sediminis HAW-EB3]
Length = 484
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R R F+ G + K++
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGG------DQHEIGVKQVA-- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +++ D + + + + L + + AA LA
Sbjct: 227 YHLWQKYGESHKVKFISVPFDPVVTEILEKIDNGQMGVILKR--------MMMRTAARLA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++GI +V G S T+ + I+ E + PL+ + K + L
Sbjct: 279 DKMGIQALVTGEAMGQVSS------QTLTNLN-VIDRCTEQ--LILRPLIAMDKQDIINL 329
Query: 184 AQDIGGQDLVNLILEES 200
++ IG +D I E
Sbjct: 330 SRKIGTEDFSKSIPEYC 346
>gi|94499665|ref|ZP_01306202.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanobacter sp. RED65]
gi|94428419|gb|EAT13392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanobacter sp. RED65]
Length = 369
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 51/152 (33%), Gaps = 19/152 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKK 59
M+ ++ SGG DSS +++ VE L +N E + C K+
Sbjct: 1 MSTESNVNTKVIVGMSGGVDSSVSAYLLMEQGYHVEGLFM----KNWEEDDGTEYCTAKE 56
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIF 115
+ D LG L A ++ ++ + + PN P R I F
Sbjct: 57 DLADAQAVCDKLGIK--LHSANFAAEYWDNVFEHFLEEYKAGRTPN---PDILCNREIKF 111
Query: 116 LVFAATLAYRLGITNIVIGV----CETDYSGY 143
F A LG I G E D S Y
Sbjct: 112 KAF-LDYAKILGADYIATGHYVRRYEKDGSTY 142
>gi|14591383|ref|NP_143461.1| hypothetical protein PH1608 [Pyrococcus horikoshii OT3]
gi|3258037|dbj|BAA30720.1| 295aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 295
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+FSGG+DSS L + V L+F
Sbjct: 54 NKRIILMFSGGKDSSLALYLLKEAGYNVSALTF 86
>gi|114566689|ref|YP_753843.1| hypothetical protein Swol_1163 [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337624|gb|ABI68472.1| conserved hypothetical protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 328
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
A+ LFSGG DS + + V ++F
Sbjct: 2 KAVCLFSGGLDSQLAAALVKKQGVTVIGVNFS 33
>gi|126173600|ref|YP_001049749.1| thiamine biosynthesis protein ThiI [Shewanella baltica OS155]
gi|152999880|ref|YP_001365561.1| thiamine biosynthesis protein ThiI [Shewanella baltica OS185]
gi|160874505|ref|YP_001553821.1| thiamine biosynthesis protein ThiI [Shewanella baltica OS195]
gi|217974156|ref|YP_002358907.1| thiamine biosynthesis protein ThiI [Shewanella baltica OS223]
gi|304409471|ref|ZP_07391091.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
baltica OS183]
gi|307303829|ref|ZP_07583582.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
baltica BA175]
gi|189030646|sp|A3D2B7|THII_SHEB5 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|189030647|sp|A6WL09|THII_SHEB8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|189030648|sp|A9KTM0|THII_SHEB9 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|254784230|sp|B8EAU2|THII_SHEB2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|125996805|gb|ABN60880.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
baltica OS155]
gi|151364498|gb|ABS07498.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
baltica OS185]
gi|160860027|gb|ABX48561.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
baltica OS195]
gi|217499291|gb|ACK47484.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
baltica OS223]
gi|304351989|gb|EFM16387.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
baltica OS183]
gi|306912727|gb|EFN43150.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
baltica BA175]
gi|315266743|gb|ADT93596.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
baltica OS678]
Length = 484
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R F+ G + E+ +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-AQHEIGVKQVAYH----- 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
WK + +++ + + + + + V R + + AA +A
Sbjct: 229 --LWKTYGESHKVKFISVPFEPVVAEILERIDNGQMG------VVLKR--MMMRTAARIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R+GI +V G S T+ + I+ E + + PL+ + K +
Sbjct: 279 DRMGIQALVTGESLGQVSS------QTLTNLN-VIDRCTE--LLILRPLIAMDKQDIINE 329
Query: 184 AQDIGGQDL 192
++ IG +D
Sbjct: 330 SRKIGTEDF 338
>gi|259487237|tpe|CBF85751.1| TPA: arginosuccinate synthetase (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 416
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ FSGG D+S L W +D V + D GQ E + K + K +
Sbjct: 8 VAFSGGLDTSVILKWLIDEGYEVVAFTADVGQ----EEDFAAIKEKALKLGAVKAEVVDL 63
Query: 73 EDHILPLAILGDISHSSLTKNV 94
+ I+ +++ +NV
Sbjct: 64 RREFVEELCFPAIACNAIYENV 85
>gi|332850055|ref|ZP_08432442.1| hypothetical protein HMPREF0021_00011 [Acinetobacter baumannii
6013150]
gi|332871520|ref|ZP_08440014.1| hypothetical protein HMPREF0020_03669 [Acinetobacter baumannii
6013113]
gi|332730904|gb|EGJ62210.1| hypothetical protein HMPREF0021_00011 [Acinetobacter baumannii
6013150]
gi|332731374|gb|EGJ62666.1| hypothetical protein HMPREF0020_03669 [Acinetobacter baumannii
6013113]
Length = 440
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 27/227 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVRKKIVELMPKW 67
LFSGG DS+ + + +S Y Q N L + +++ K
Sbjct: 149 CLFSGGLDSAIGIIDLTSKNINPVLISHAYARDKSKQDNLYNLLGLKNSKFQVIAYPRKA 208
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D + + + + ++ ++ Q + +VP N + + L R
Sbjct: 209 GDIPTDVQMRTRSFNFIAFGALISTAISQHHQAGKVTTLYVPE-NGL-ISINPPLTPRR- 265
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IG T + + + + V + P ++ K E +
Sbjct: 266 -----IGSLSTRTTH-----PHYMNLLNELFKR-VHLPVFLENPYQFMTKGEMMQNCS-- 312
Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
+ ++ I +++ +C K G C C C +R+ +
Sbjct: 313 -NKIILKQIAKDTVSC-----GKWKRTGIQCGKCVPCIIRRASFNSA 353
>gi|242399734|ref|YP_002995159.1| NH(3)-dependent NAD(+) synthetase [Thermococcus sibiricus MM 739]
gi|259511199|sp|C6A5B5|NADE_THESM RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|242266128|gb|ACS90810.1| NH(3)-dependent NAD(+) synthetase [Thermococcus sibiricus MM 739]
Length = 254
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 40/195 (20%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
+ + ++L SGG DS+T A ++V L Y VE +C
Sbjct: 20 KVEESNVKGVILGISGGVDSATVAYLAARAIGKEKVLGLVMPYHINRDVEDALLVCNNLG 79
Query: 60 IVELMPKWKDSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
I + K + E + L + + +++ +I L
Sbjct: 80 INYKVINIKSIVNEFEKNLDFELNNVSRGNIMSRTR------------------MILL-- 119
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
A+ +V+G R + + T + + PL+ L K
Sbjct: 120 ---YAHANSKNYLVLGTS---------NRSEFL----TGYFTKWGDSASDYAPLINLYKT 163
Query: 179 ETWKLAQDIGGQDLV 193
E W +A+ +G + +
Sbjct: 164 EVWNIARILGVPNEI 178
>gi|296124394|ref|YP_003632172.1| argininosuccinate synthase [Planctomyces limnophilus DSM 3776]
gi|296016734|gb|ADG69973.1| argininosuccinate synthase [Planctomyces limnophilus DSM 3776]
Length = 404
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
PS +L +SGG D+S L W D V + D GQ E R + KK + K
Sbjct: 2 PSCVLAYSGGLDTSVILGWLQDEGYDVHCVYVDVGQ----PCEDREAILKKAHDCGAKSA 57
Query: 69 DSLGED 74
+
Sbjct: 58 RIVDAQ 63
>gi|83953541|ref|ZP_00962262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfitobacter sp. NAS-14.1]
gi|83841486|gb|EAP80655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sulfitobacter sp. NAS-14.1]
Length = 380
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALARKGACCAGIDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++L ++ ++ A P VP
Sbjct: 82 SMGFPHYVLD---YENVFKDAVIDEFADSYLGGATP---VP 116
>gi|170575385|ref|XP_001893218.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative [Brugia malayi]
gi|158600895|gb|EDP37948.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative [Brugia malayi]
Length = 383
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+K+ + SGG DS+ R V +
Sbjct: 1 MKQIRKVVCAISGGVDSAVSAYLLKKRGFDVIGVH 35
>gi|28211134|ref|NP_782078.1| tRNA-specific 2-thiouridylase MnmA [Clostridium tetani E88]
gi|75542384|sp|Q894S7|MNMA2_CLOTE RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|28203574|gb|AAO36015.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Clostridium tetani E88]
Length = 358
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 5/129 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ--RNKVELECRLCVRKKIVELMP 65
L+ SGG DSS ++ V + Q + +E E C + +
Sbjct: 5 KKKVLVGMSGGVDSSVAAYLLKEQGYEVIGATMQIWQDDKEFIEREGGCCSLSAVADARR 64
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+++ D ++ + + PN V I A
Sbjct: 65 VANKIGIPFYVMN---FKDAFKKNVIDYFVDEYMEGRTPNPCVACNKFIKFSSFLDKAMT 121
Query: 126 LGITNIVIG 134
LGI + G
Sbjct: 122 LGIDYVATG 130
>gi|282165327|ref|YP_003357712.1| probable thiamine biosynthesis protein ThiI [Methanocella
paludicola SANAE]
gi|282157641|dbj|BAI62729.1| probable thiamine biosynthesis protein ThiI [Methanocella
paludicola SANAE]
Length = 388
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 68/221 (30%), Gaps = 45/221 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-ECRLCVRKKIVE 62
+ + L SGG DS + R + + F+ G+ + + E + KK+ E
Sbjct: 174 PMGSQGKMVALISGGIDSPVAAWLMMRRGCDLIPVFFNNGKFSDKDYTERAMDTIKKLKE 233
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
P + E + H + I N+ T V + A +
Sbjct: 234 WAPGRTFKIYE-----------VPHGDSLREF---IDRGNVKYTCV-FCKHMMYRTAIEI 278
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--------HVTVHTPLMW 174
A + G ++ G ++ + ++ ++ PL+
Sbjct: 279 AKKEGAHGLITG-----------------SSLGQVASQTSDNLMIEHYRIDFPIYHPLIG 321
Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWG 215
L K E ++A+ IG D+ TC G
Sbjct: 322 LDKNEIVEIARKIGTYDISVRPA----TCCKAVPKHPSIHG 358
>gi|253698721|ref|YP_003019910.1| thiamine biosynthesis protein [Geobacter sp. M21]
gi|251773571|gb|ACT16152.1| thiamine biosynthesis protein [Geobacter sp. M21]
Length = 334
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ L SGG DS+ + LD+ VE L+F
Sbjct: 1 MQRKAIALLSGGLDSTLAVKVLLDQGIAVEALNF 34
>gi|227544918|ref|ZP_03974967.1| argininosuccinate synthase [Lactobacillus reuteri CF48-3A]
gi|300910054|ref|ZP_07127514.1| argininosuccinate synthase [Lactobacillus reuteri SD2112]
gi|227185085|gb|EEI65156.1| argininosuccinate synthase [Lactobacillus reuteri CF48-3A]
gi|300892702|gb|EFK86062.1| argininosuccinate synthase [Lactobacillus reuteri SD2112]
Length = 415
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
M D I +L +SGG D+S ++W ++ V D G
Sbjct: 1 MEDEIMSKEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG 43
>gi|224539103|ref|ZP_03679642.1| hypothetical protein BACCELL_04004 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519267|gb|EEF88372.1| hypothetical protein BACCELL_04004 [Bacteroides cellulosilyticus
DSM 14838]
Length = 436
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 61/205 (29%), Gaps = 49/205 (23%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + L+ SGG DS L L E ++ R + + VR E
Sbjct: 14 KLFTREDKILVTLSGGADSVALLRLLLAMGYTCEAAHCNFHLRGDESVRDEMFVR----E 69
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L + + L H + + +++++++ L
Sbjct: 70 LCLQLEVPLHVQH-------FQTTEEAEKRHISIEMAARELR---------------YAW 107
Query: 123 AYRL----GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVH 169
+L G I + + D + + + G + +
Sbjct: 108 FEQLRLQQGANVIAVAHHKDDS----------VETLLLNLIRGTGINGLLGIRPKNGNIV 157
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVN 194
PL+ L + E + Q+IG + +
Sbjct: 158 RPLLCLDRKEITEYLQEIGQSYVTD 182
>gi|34558197|ref|NP_908012.1| tRNA methyltransferase [Wolinella succinogenes DSM 1740]
gi|34483916|emb|CAE10912.1| TRNA METHYLTRANSFERASE [Wolinella succinogenes]
Length = 333
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V L F+ G
Sbjct: 2 KALALFSGGLDSLLSMKLIQEMGIEVVALHFNIG 35
>gi|121602707|ref|YP_989294.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella bacilliformis KC583]
gi|166234845|sp|A1UTJ1|MNMA_BARBK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|120614884|gb|ABM45485.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bartonella bacilliformis KC583]
Length = 391
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 32/129 (24%), Gaps = 4/129 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS V ++ Y C + I +
Sbjct: 13 ENSRVVVAMSGGVDSSVVAGLLKREGYDVVGITLQLYDHGAATHRAGACCAGQDIEDARR 72
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++L ++ A P V + A
Sbjct: 73 VAETLRIPYYVLD---YESRFREAVIDPFAESYARGETPIPCVACNQTVKFADLLVTARE 129
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 130 LGADALATG 138
>gi|224582263|ref|YP_002636061.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|254784229|sp|C0Q7V0|THII_SALPC RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|224466790|gb|ACN44620.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 482
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 64/193 (33%), Gaps = 27/193 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVE 62
I L L SGG DS + R RV F+ G +++ + +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAVHEI----------GVRQ 222
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + G H + I+ + + K+ D + V R + + A+ +
Sbjct: 223 VAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASKV 275
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A R G+ +V G S + + + S + PL+ K
Sbjct: 276 AERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIIN 326
Query: 183 LAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 327 LARQIGTEDFART 339
>gi|294673632|ref|YP_003574248.1| tRNA(Ile)-lysidine synthetase [Prevotella ruminicola 23]
gi|294473514|gb|ADE82903.1| tRNA(Ile)-lysidine synthetase [Prevotella ruminicola 23]
Length = 433
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 38/173 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L D R+E C +R + + ++ +L
Sbjct: 22 LVGLSGGADSVALLLILKDLGYRIEAAH------------CNFRLRGEESDRDEQFVRNL 69
Query: 72 GEDHILPLAILG-DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ H +PL ++ D + V++++ +L + R L +G T+
Sbjct: 70 CKQHDIPLHVIHFDTKEYAALHKVSIEMAARDLRYGY--FR---------QLCQDIGATD 118
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I D + + + +H K + +
Sbjct: 119 VCIAHHRDDAV--------------ETLMMNLSRGAGIHGLTGIRPKNDIVRR 157
>gi|255036423|ref|YP_003087044.1| tRNA-specific 2-thiouridylase MnmA [Dyadobacter fermentans DSM
18053]
gi|254949179|gb|ACT93879.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Dyadobacter fermentans DSM 18053]
Length = 368
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
+ K L+ SGG DSS ++ V ++ DY + E C I
Sbjct: 1 MSKHGRILVAMSGGIDSSLAAVLLHEQGYEVIGMTMKTWDYASSGGTKKETGCCSLDSIN 60
Query: 62 ELMPKWKDSLGEDHILPL 79
+ + +IL +
Sbjct: 61 DARNIAVELGFPHYILDI 78
>gi|229828425|ref|ZP_04454494.1| hypothetical protein GCWU000342_00486 [Shuttleworthia satelles DSM
14600]
gi|229793019|gb|EEP29133.1| hypothetical protein GCWU000342_00486 [Shuttleworthia satelles DSM
14600]
Length = 401
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 59/199 (29%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS R ++ F + ++K+++L
Sbjct: 177 PVGTNGKAMLLLSGGIDSPVAGWMIAKRGVTLDATYF-----HAPPYTSE-RAKQKVIDL 230
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ G HI+ + + + I + A
Sbjct: 231 AEQVARYAGPIRLHIVNFTDIQLYIYEQCPHDELTIIMRRY------------MMRIAEH 278
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A ++ G + + +++ + + V+ PL+ K +
Sbjct: 279 FARENACMGLITGESIGQVAS---------QTMQSLLCTNAVCQLPVYRPLIGFDKQDIV 329
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ I + L E+
Sbjct: 330 SIAEKIDTYETSILPYEDC 348
>gi|225028528|ref|ZP_03717720.1| hypothetical protein EUBHAL_02807 [Eubacterium hallii DSM 3353]
gi|224954171|gb|EEG35380.1| hypothetical protein EUBHAL_02807 [Eubacterium hallii DSM 3353]
Length = 421
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 59/199 (29%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R ++ F + +K +
Sbjct: 202 PVGTNGRAMLLLSGGIDSPVAGYMISKRGVSIDATYF-----HAPPYTSERAKQKVVDLA 256
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + K+ + + I I + + ++ + A
Sbjct: 257 KEIAKYTGPITLHVVNFTDIQMAIYEKCPHDELTIIMRRY-------------MMKIAEH 303
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + ++V G + + + + + V P + L K E
Sbjct: 304 FANQDNCLSLVTGESIGQVAS---------QTMHSLYVTNEVCQMPVFRPCIGLDKNEIV 354
Query: 182 KLAQDIGGQDLVNLILEES 200
K+A+ IG + L E+
Sbjct: 355 KVAEKIGTYETSILPYEDC 373
>gi|15897271|ref|NP_341876.1| thiamine biosynthesis protein thiI (thiI) [Sulfolobus solfataricus
P2]
gi|284174521|ref|ZP_06388490.1| thiamine biosynthesis protein thiI (thiI) [Sulfolobus solfataricus
98/2]
gi|20140721|sp|Q980G6|THII_SULSO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|13813478|gb|AAK40666.1| Thiamine biosynthesis protein thiI (thiI) [Sulfolobus solfataricus
P2]
gi|261601941|gb|ACX91544.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
solfataricus 98/2]
Length = 371
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 54/187 (28%), Gaps = 43/187 (22%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++LFSGG DS + R L+F+ G EL K + ++ +W
Sbjct: 170 KTVVLFSGGIDSPVATWMMMKRGSVPIILNFNLGGDLHKEL------VLKELNMLKRWSG 223
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ I S + + + + + A L +
Sbjct: 224 GHKLKIFIVKGTDVFIKLSQVERRSRVVMLKR------------VMYKTAEKLCEKTNAK 271
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--------HVTVHTPLMWLKKYETW 181
+I G ++ + M + + PL+ K E
Sbjct: 272 SITTG-----------------ESLSQVSSQTMANLYVTEYGIKYPIFRPLIGFDKEEIV 314
Query: 182 KLAQDIG 188
+A+ IG
Sbjct: 315 DIARKIG 321
>gi|312143962|ref|YP_003995408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Halanaerobium sp. 'sapolanicus']
gi|311904613|gb|ADQ15054.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Halanaerobium sp. 'sapolanicus']
Length = 357
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 54/193 (27%), Gaps = 22/193 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVE--TLSF--DYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS + ++ V T+ DY + E C +
Sbjct: 2 KKVMIAMSGGVDSSVAAALLKEKGYEVIGGTMHIFPDYEEATDREDHC---CSYSAIRDA 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ L H + L D + + PN V I A
Sbjct: 59 KRVAQKLEIPHFV--FNLKDEFQEKVIDYFVYEYSKARTPNPCVMCNKKIKFDALLRKAR 116
Query: 125 RLGITNIVIGV------CETDY---SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+G I G Y G R ++ L E PL
Sbjct: 117 EIGCDYIATGHYSKIEKNNGRYLLKKG----RDESKDQSYMLYVLNQEQLSRALFPLGDF 172
Query: 176 KKYETWKLAQDIG 188
K E + A+++G
Sbjct: 173 TKQEIRQKAKELG 185
>gi|221639030|ref|YP_002525292.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides KD131]
gi|254811459|sp|B9KR64|MNMA_RHOSK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|221159811|gb|ACM00791.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacter sphaeroides KD131]
Length = 379
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 9/104 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
A ++ SGG DSS + V ++ Y + + C + I +
Sbjct: 17 ATRVVVAMSGGVDSSVVAAELAAEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRV 76
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
+ ++L ++ + V + D L T VP
Sbjct: 77 AETMGFPHYVLDY-------ENTFREAVIDEFADAYLAGATPVP 113
>gi|89898057|ref|YP_515167.1| PP-loop superfamily ATPase [Chlamydophila felis Fe/C-56]
gi|123483693|sp|Q255L6|TILS_CHLFF RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|89331429|dbj|BAE81022.1| PP-loop superfamily ATPase [Chlamydophila felis Fe/C-56]
Length = 317
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 23/69 (33%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ S LL SGG DS L R + DYG R E + E
Sbjct: 17 SSLDMKKSYLLALSGGSDSLFLLYLLKSRGVSFIAVHVDYGWRESSYREAEELELRCQAE 76
Query: 63 LMPKWKDSL 71
+P D +
Sbjct: 77 GVPIIVDHV 85
>gi|297619697|ref|YP_003707802.1| Queuosine synthesis-like protein [Methanococcus voltae A3]
gi|297378674|gb|ADI36829.1| Queuosine synthesis-like protein [Methanococcus voltae A3]
Length = 275
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 22/129 (17%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K AL+ FSGG DS+ A F + E ++ + + + + + +
Sbjct: 52 KSNSKALVAFSGGVDSTVSALIAKKLF-KTELITVN----------SPIILNAQQKQEIS 100
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ L H L +I ++L K + ++ + A A +
Sbjct: 101 DLANKLQLPHNFLDVDLSEIKENTLKKKYHPCGKCHS-----------LIENVALNYALK 149
Query: 126 LGITNIVIG 134
G I+ G
Sbjct: 150 NGYDYIIYG 158
>gi|187478638|ref|YP_786662.1| tRNA-specific 2-thiouridylase MnmA [Bordetella avium 197N]
gi|123514648|sp|Q2KZ71|MNMA_BORA1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|115423224|emb|CAJ49755.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bordetella avium 197N]
Length = 370
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 65/236 (27%), Gaps = 46/236 (19%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELE 51
M ++K ++ SGG DSS + V L +Y + +L
Sbjct: 1 MVQTLQKKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCS-TRQDLL 59
Query: 52 CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
V I + + L + S + +
Sbjct: 60 DAASVADLIGVEFEYVNFASEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKA------ 113
Query: 112 NIIFLVFAATLAYRLGITNIVIG----VCETDYS--------GYPDCRHD---TIRAIET 156
FL A LG +I G V D + D D + +
Sbjct: 114 ---FLD----HAMSLGAEHIATGHYARVRAVDTARGQRFQLLKALDASKDQSYFLHRLNQ 166
Query: 157 AINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
A PL L K E ++A +IG + + C++G+R R
Sbjct: 167 AQLSRT------LFPLGELHKTEVRRIAHEIGLHNAAKKD--STGICFIGERPFRE 214
>gi|14590222|ref|NP_142287.1| hypothetical protein PH0300 [Pyrococcus horikoshii OT3]
gi|3256690|dbj|BAA29373.1| 310aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 310
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++ K L+ SGG+DS+ +E L + G
Sbjct: 42 KLLTKDERILVAVSGGKDSAVTAYVLKKLGYNIECLHINLG 82
>gi|328772493|gb|EGF82531.1| hypothetical protein BATDEDRAFT_9716 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M K LL +SGG D+S L+W +++ V + GQ + + E KI
Sbjct: 1 MTGTASKG-KVLLAYSGGLDTSCILAWLIEQGYEVIAYIANIGQ--EEDFEVARLKALKI 57
Query: 61 VE 62
Sbjct: 58 GA 59
>gi|320162464|ref|YP_004175689.1| hypothetical protein ANT_30630 [Anaerolinea thermophila UNI-1]
gi|319996318|dbj|BAJ65089.1| hypothetical protein ANT_30630 [Anaerolinea thermophila UNI-1]
Length = 271
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 37/191 (19%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+I+ + SA++ FSGG DS+ + A RV G+R + + E
Sbjct: 11 EILAELDSAIVAFSGGVDSTLVAAAA----YRVL------GERAVAITAVSESLAESERE 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+G H+L + + N L A
Sbjct: 61 ETLALARHIGIRHVLIHSHELQDERYRANSPMRCYWCKNELG------------ALLAAY 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYET 180
A + + I+ G D D R +A++ A +PL+ + K +
Sbjct: 109 ARQHHYSAILDGSNLDDLG---DVRPG-RKAMQEA---------GFRSPLIEAGMTKADV 155
Query: 181 WKLAQDIGGQD 191
+ A+ +G +
Sbjct: 156 REAARLLGLPN 166
>gi|296273180|ref|YP_003655811.1| argininosuccinate synthase [Arcobacter nitrofigilis DSM 7299]
gi|296097354|gb|ADG93304.1| argininosuccinate synthase [Arcobacter nitrofigilis DSM 7299]
Length = 414
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE-- 62
K+ +L +SGG D+ST L W D + V T + D GQ +VE + I
Sbjct: 4 KEVKKVVLAYSGGLDTSTILKWLQDEYNAEVITFTADLGQGEEVEPARTKALACGIKPEN 63
Query: 63 -LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ K+ +D++ P+ I ++
Sbjct: 64 IFILDIKEEFVKDYVFPMFRANAIYEGEYLLGTSIA 99
>gi|183220730|ref|YP_001838726.1| tRNA-specific 2-thiouridylase MnmA [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189910831|ref|YP_001962386.1| tRNA-specific 2-thiouridylase MnmA [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|205816873|sp|B0SPC6|MNMA_LEPBP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205816879|sp|B0SG84|MNMA_LEPBA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|167775507|gb|ABZ93808.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167779152|gb|ABZ97450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 380
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 27/202 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIV 61
+K+ ++ SGG DS+ ++ V + +++Y + C + I
Sbjct: 1 MKEKEKIIVAMSGGVDSAVAAGLLMEAGYDVIGVNLRTWEYEAPACDTTKKSCCSPEDIR 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ +++ + + + +D PN V N F+ F A
Sbjct: 61 DARDVGLSLNIPFYVIK---MEKVFGERVIDRFISDYKDGRTPNPCVEC-NT-FVKFGAL 115
Query: 122 L--AYRLGITNIVIG----VCETDYSGYPDCRHDTIRAIET-------AINLGMESHVTV 168
A +LGI I G V E D R+ A++ L ++
Sbjct: 116 FEQAKKLGIDKIATGHYARVIEVDG------RYAIRNAVDMKKNQTYYLYGLSQDNIKNT 169
Query: 169 HTPLMWLKKYETWKLAQDIGGQ 190
PL + K E ++A+ +G
Sbjct: 170 VFPLGEMDKSEVREIAKRMGLP 191
>gi|167765362|ref|ZP_02437475.1| hypothetical protein BACSTE_03750 [Bacteroides stercoris ATCC
43183]
gi|167696990|gb|EDS13569.1| hypothetical protein BACSTE_03750 [Bacteroides stercoris ATCC
43183]
Length = 361
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 43/139 (30%), Gaps = 23/139 (16%)
Query: 1 MND---IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
MN+ + K L+ SGG DS+ TCL ++ + L+
Sbjct: 1 MNEWQNMNKSEKRVLVGMSGGIDSTATCL-MLREQGYEIVGLTM-------------WVW 46
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF- 115
+ E E H+ + + +N + + PN V N +F
Sbjct: 47 GNEPAEARNLADSMGIEHHVADE---REAFRQIIVQNFIDEYRQGRTPNPCVMC-NPLFK 102
Query: 116 LVFAATLAYRLGITNIVIG 134
A +L I G
Sbjct: 103 FRILTEWADKLNCRYIATG 121
>gi|146310551|ref|YP_001175625.1| thiamine biosynthesis protein ThiI [Enterobacter sp. 638]
gi|145317427|gb|ABP59574.1| [ThiS-adenylate] sulfurtransferase [Enterobacter sp. 638]
Length = 515
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 206 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 254
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ G H + I+ + + K+ D + V R + + A+
Sbjct: 255 QVAHYLWKRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASQ 307
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 308 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 358
Query: 182 KLAQDIGGQDLVNL 195
+A++IG +D
Sbjct: 359 DMAREIGTEDFART 372
>gi|332883857|gb|EGK04137.1| argininosuccinate synthase [Dysgonomonas mossii DSM 22836]
Length = 399
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 40/132 (30%), Gaps = 18/132 (13%)
Query: 7 KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L FSGG D+S C + D V T + G EL+ K+
Sbjct: 1 MKKKVVLAFSGGLDTSFCAKYLSADLGYEVYTAIANTGGFTADELKVIEQKAYKLGAAKH 60
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + + I G++ + + + IF A
Sbjct: 61 VSLDITQEYYEKSIKYMIFGNVLRN---GTYPISVSSER-----------IFQAIAIINY 106
Query: 123 AYRLGITNIVIG 134
A +G + G
Sbjct: 107 AKEIGADAVAHG 118
>gi|126462045|ref|YP_001043159.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides ATCC
17029]
gi|205816923|sp|A3PJ71|MNMA_RHOS1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|126103709|gb|ABN76387.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacter sphaeroides ATCC 17029]
Length = 379
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 9/104 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
A ++ SGG DSS + V ++ Y + + C + I +
Sbjct: 17 ATRVVVAMSGGVDSSVVAAELAAEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRV 76
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
+ ++L ++ + V + D L T VP
Sbjct: 77 AETMGFPHYVLDY-------ENTFREAVIDEFADAYLAGATPVP 113
>gi|150015984|ref|YP_001308238.1| tRNA-specific 2-thiouridylase MnmA [Clostridium beijerinckii NCIMB
8052]
gi|205813680|sp|A6LSF2|MNMA_CLOB8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|149902449|gb|ABR33282.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium beijerinckii NCIMB 8052]
Length = 358
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 29/101 (28%), Gaps = 5/101 (4%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELM 64
L+ SGG DSS + V + Q + E E R C V+
Sbjct: 1 MKKKVLVGMSGGVDSSVAAYLLKQQGYDVIGATMQIWQ-HDEEFEEREGGCCSLSAVDDA 59
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+ D L + D + + D PN
Sbjct: 60 RRVCDKLDIPFYV--LNFRDYFKEKVIDKFVQEYIDGKTPN 98
>gi|329298748|ref|ZP_08256084.1| tRNA s(4)U8 sulfurtransferase [Plautia stali symbiont]
Length = 482
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWQRFGRSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASM 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ ++ G S + + + S + PL+ K
Sbjct: 275 VAERYGVQTLLTGEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
+A+ IG +D
Sbjct: 326 NIARQIGTEDFART 339
>gi|299143928|ref|ZP_07037008.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518413|gb|EFI42152.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 355
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ S +L SGG DSS C + ++ V +
Sbjct: 1 MTESKSVILGMSGGVDSSVCAALLKEQGYDVTAV 34
>gi|288818608|ref|YP_003432956.1| thiamine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|288788008|dbj|BAI69755.1| thiamine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|308752199|gb|ADO45682.1| Queuosine synthesis [Hydrogenobacter thermophilus TK-6]
Length = 347
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ L SGG DSS + D+ ++ L F Y E + RL ++++ +
Sbjct: 5 RAVALLSGGLDSSLAVHLLKDQGVEIKALYF-YTGFCITEHKRRLGLKREDGQQYVNPAF 63
Query: 70 SLGEDHILPL 79
+P+
Sbjct: 64 RAAAQLKVPI 73
>gi|85702766|ref|ZP_01033870.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseovarius sp. 217]
gi|85671694|gb|EAQ26551.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseovarius sp. 217]
Length = 383
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAHLASEGYDVVGVTLQLYDHGAALAKKGACCAGVDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L +I ++ A P VP
Sbjct: 82 EMGFPHYVLD---YENIFRDAVIDEFADSYLAGATP---VP 116
>gi|326479673|gb|EGE03683.1| argininosuccinate synthase [Trichophyton equinum CBS 127.97]
Length = 415
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ + LL +SGG D+S L+W L++ V D GQ + E + KK+V
Sbjct: 1 MAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQAEDFKEAERKALAVGAKKLV 60
>gi|327308140|ref|XP_003238761.1| argininosuccinate synthetase [Trichophyton rubrum CBS 118892]
gi|326459017|gb|EGD84470.1| argininosuccinate synthetase [Trichophyton rubrum CBS 118892]
Length = 415
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ + LL +SGG D+S L+W L++ V D GQ + E + KK+V
Sbjct: 1 MAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQAEDFKEAERKALAVGAKKLV 60
>gi|262306007|gb|ACY45596.1| gln amidotransferase [Abacion magnum]
Length = 197
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V L D G
Sbjct: 45 KVLMLLSGGVDSTVCAALLHKALKDDQVIALHIDNG 80
>gi|260942363|ref|XP_002615480.1| hypothetical protein CLUG_04362 [Clavispora lusitaniae ATCC
42720]
gi|238850770|gb|EEQ40234.1| hypothetical protein CLUG_04362 [Clavispora lusitaniae ATCC
42720]
Length = 416
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K + L +SGG D+S L+W L++ V + GQ E + +K +
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVVAFLANIGQ----EEDFEAAEKKALAIG 54
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
K+ + I +++ +NV
Sbjct: 55 ATKFVVVDVRKQFVENVCFPAIQSNAIYENV 85
>gi|289207540|ref|YP_003459606.1| argininosuccinate synthase [Thioalkalivibrio sp. K90mix]
gi|288943171|gb|ADC70870.1| argininosuccinate synthase [Thioalkalivibrio sp. K90mix]
Length = 407
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 20/136 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K +L +SGG D+S L W D++ V T + D GQ +VE + +
Sbjct: 1 MSSKISRVVLAYSGGLDTSVILKWLEDQYGCEVITFTADLGQGEEVEPARAKAEALGVKQ 60
Query: 63 L-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNIIFLVFA 119
+ + +++ D++ P+ I ++ P R ++
Sbjct: 61 IYIEDLRETFVRDYVFPMFRANTIYEGEYLLGTSIAR----------PLIARRMV----- 105
Query: 120 ATLAYRLGITNIVIGV 135
+A G I G
Sbjct: 106 -EIAEETGADAIAHGA 120
>gi|197116482|ref|YP_002136909.1| thiamin biosynthesis protein ThiI-like adenine nucleotide alpha
hydrolase superfamily protein [Geobacter bemidjiensis
Bem]
gi|197085842|gb|ACH37113.1| thiamin biosynthesis protein ThiI-related adenine nucleotide
alpha hydrolase superfamily protein [Geobacter
bemidjiensis Bem]
Length = 334
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ L SGG DS+ + LD+ VE L+F
Sbjct: 1 MQRKAIALLSGGLDSTLAVKVLLDQGIAVEALNF 34
>gi|317060651|ref|ZP_07925136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D12]
gi|313686327|gb|EFS23162.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D12]
Length = 332
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKIVQEQGIEVIALNF 35
>gi|282901416|ref|ZP_06309341.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Cylindrospermopsis raciborskii CS-505]
gi|281193695|gb|EFA68667.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Cylindrospermopsis raciborskii CS-505]
Length = 350
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 64/203 (31%), Gaps = 43/203 (21%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVE 62
++ SGG DSS + ++ V L+ GQ C + +V+
Sbjct: 1 MMKKVVVGLSGGVDSSVAAAILHNQGYDVIGLTLWLMKGKGQ----------CCSEGMVD 50
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRN---IIF 115
+ I+ + + T V + + T +P R
Sbjct: 51 AATICQQLSIPHEIVDMRDVFQ------TNIVDYLVSGYSAGITPLPCSQCNRTVKFGPM 104
Query: 116 LVFAATLAYRLGITNIVIGV---CETDYSGYPDCRHDTIRAIET-------AINLGMESH 165
L +A +LG I G D+ R+ +RA + +L E
Sbjct: 105 LEYAR---EKLGSDVIATGHYARIAYDHGTE---RYQLLRAFDRNKDQSYFLYDLSQELL 158
Query: 166 VTVHTPLMWLKKYETWKLAQDIG 188
PL L K +T K+A + G
Sbjct: 159 AGTIFPLGELNKNDTRKIAAEYG 181
>gi|158299176|ref|XP_319294.4| AGAP010139-PA [Anopheles gambiae str. PEST]
gi|157014240|gb|EAA13830.4| AGAP010139-PA [Anopheles gambiae str. PEST]
Length = 679
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 59/212 (27%), Gaps = 44/212 (20%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
LLL SGG DS+ C + D+V + D G + L V K + EL
Sbjct: 230 NSKVLLLVSGGVDSTVCAALLRHALKPDQVIAVHIDNG---FMRLNESANVEKSLRELGV 286
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN-------VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ + S ++ ++ + + + + FV N +
Sbjct: 287 DLFVKNAIYKFMKGTTTIKLPGSLYNQDTQMLCQTISPEDKRKIIGDVFVKVSNDVLREM 346
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE-----------------TAINLG 161
L + + R D I + I
Sbjct: 347 ------NLNADEVYLAQGTL--------RPDLIESASTLVSAKADTIKTHHNDTELIRKL 392
Query: 162 MESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
E+ + PL K E +L +G +
Sbjct: 393 REAGRVIE-PLRDFHKDEVRQLGYSLGLPAHL 423
>gi|46202527|ref|ZP_00053063.2| COG0482: Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Magnetospirillum magnetotacticum MS-1]
Length = 373
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 43/138 (31%), Gaps = 17/138 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECR----LCVRKKIV 61
A ++ SGG DSS + ++ V ++ Y C K +
Sbjct: 11 SATRVVVAMSGGVDSSAVAALLKEQGYDVVGVTLQLYDLATSGIEPGACRPNTCCAGKDI 70
Query: 62 ELMPKWKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFL 116
D+LG H +L + + + A + P VP R + F
Sbjct: 71 HDARAVADALGIPHYVLD---FEETFRRDVVERFAQTYLEAKTP---VPCIECNRTVKFR 124
Query: 117 VFAATLAYRLGITNIVIG 134
+A LG + G
Sbjct: 125 DL-LGVAKDLGADALATG 141
>gi|313885161|ref|ZP_07818913.1| thiamine biosynthesis/tRNA modification protein ThiI [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619852|gb|EFR31289.1| thiamine biosynthesis/tRNA modification protein ThiI [Eremococcus
coleocola ACS-139-V-Col8]
Length = 405
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL+ SGG DS + R +E + F + L KK+ + +
Sbjct: 181 KGLLMLSGGFDSPIAGYLMMKRGMELEAVHFASPPYTSPQ---ALEKAKKLTAKLAHYGL 237
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L + H++P + + N +M + I L L R
Sbjct: 238 PL-KLHVVPFTKTQEAIKEHIHDNESMTVMRR------------IMLRIMDQLLIRQKAN 284
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G + TI ++ IN S + PL+ K + LAQ I
Sbjct: 285 AIVNGESLGQVAS------QTIDSM-RVINAVTNSP--ILRPLIATDKNDIINLAQTIDT 335
Query: 190 QDLVNLILEES 200
+ N E+
Sbjct: 336 YTISNEPYEDC 346
>gi|307721116|ref|YP_003892256.1| (ThiS-adenylate) sulfurtransferase [Sulfurimonas autotrophica DSM
16294]
gi|306979209|gb|ADN09244.1| (ThiS-adenylate) sulfurtransferase [Sulfurimonas autotrophica DSM
16294]
Length = 480
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 25/177 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS+ + R + + F+ G E+ + + K
Sbjct: 182 LSLMSGGFDSTVASYLTMKRGIKTHFIFFNLGGMAH-EIGVKQVALYLWNKFGSSHKVKF 240
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ L +I S+ + + ++ + L+ + +A + I +
Sbjct: 241 ISVPFDDV--LTEIFRSTPPTYMGVTLKR-------------LMLMASEKVANAMEIDAL 285
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
V G S + + + ++ + PL + K E +A +IG
Sbjct: 286 VTGESVAQVSS---------QTLRNLALIDQVTNKLILRPLATMNKPEIISIANEIG 333
>gi|266623735|ref|ZP_06116670.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium hathewayi DSM 13479]
gi|288864455|gb|EFC96753.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium hathewayi DSM 13479]
Length = 369
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR 53
D + K P ++ SGG DSS ++ V ++ Q + E++
Sbjct: 9 DTMNK-PKVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEETEVQEE 58
>gi|217967082|ref|YP_002352588.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dictyoglomus turgidum DSM 6724]
gi|217336181|gb|ACK41974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dictyoglomus turgidum DSM 6724]
Length = 343
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 59/183 (32%), Gaps = 26/183 (14%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS V L+ + + + KK+ E + +
Sbjct: 9 MSGGVDSSITAYLLKKEGYEVIGLTMN------IAYSSSIKDAKKVAEYLNIPHFFVDLK 62
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN-IIFLVFAATLAYRLGITNIVI 133
+ I+ S + PN V N +I A LG +
Sbjct: 63 NEFEEKIIKYFVES---------YKHGYTPNPCV-FCNKLIKFGLLLEKAKELGADFLST 112
Query: 134 G-----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETWKLAQ 185
G V + + Y R ++ + + LGM + + PL L K E K+A
Sbjct: 113 GHYVRKVWDEERKTYLLMRAKDLKK-DQSYFLGMLTQEQIKKTLFPLGELTKEEVRKIAD 171
Query: 186 DIG 188
++G
Sbjct: 172 ELG 174
>gi|118593646|ref|ZP_01551022.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Stappia aggregata IAM 12614]
gi|118433757|gb|EAV40418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Stappia aggregata IAM 12614]
Length = 392
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C I + +
Sbjct: 15 RVVVAMSGGVDSSVVAALMKAEGYDVIGVTLQLYDHGAAVSKAKSCCAGVDIHDARRAAE 74
Query: 69 DSLGEDHILP 78
++L
Sbjct: 75 TIGIPHYVLD 84
>gi|239947878|ref|ZP_04699631.1| tRNA-methyltransferase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922154|gb|EER22178.1| tRNA-methyltransferase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 370
Score = 42.9 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 25/202 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M ++ K + ++ SGG DSS + ++ V ++ Y V + C +
Sbjct: 6 MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 65
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNI 113
I + ++L S+ N P N V R++
Sbjct: 66 IYDAKMVANKLGIPHYVL---GYESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 122
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVT 167
I A LG + G +G D + ++ A + + +
Sbjct: 123 I------KTARELGADKLATGHYVRKING--DNGAELHTGLDPAKDQSYFLFTTTKEQLE 174
Query: 168 -VHTPLMWLKKYETWKLAQDIG 188
+ PL L K ET KLA G
Sbjct: 175 YLSFPLGGLTKDETRKLASKFG 196
>gi|313115553|ref|ZP_07801013.1| argininosuccinate synthase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622152|gb|EFQ05647.1| argininosuccinate synthase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 407
Score = 42.9 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVE-LECRLCVRKKIV 61
+ + +L +SGG D+S + W + + V + + GQ+ ++E LE R
Sbjct: 1 MSEIKKVVLAYSGGLDTSIIIPWLKEHYNNCEVIAVCGNVGQKGELEGLEERAKASGASK 60
Query: 62 ELMPKWKDSLGEDHILP 78
+ D ED+++P
Sbjct: 61 LYVEDLTDEFVEDYVIP 77
>gi|289423552|ref|ZP_06425353.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptostreptococcus anaerobius 653-L]
gi|289156054|gb|EFD04718.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptostreptococcus anaerobius 653-L]
Length = 350
Score = 42.9 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 64/198 (32%), Gaps = 39/198 (19%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPK 66
LL SGG DSS V ++ R ++ ++E + V +K+
Sbjct: 3 KKKVLLGMSGGVDSSVAAYLLKKEGYDVVGVNMKLWDRPDEKDVEDAISVCEKLD----- 57
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATL 122
H++ L + +N + + + PN P +NI F
Sbjct: 58 -----IPFHVIDL---QKEFKGKVIENFIKEYEAGHTPN---PCVFCNKNIKFGDL-FKK 105
Query: 123 AYRLGITNIVIGVCE-----TDYSGYPDCRHDTIRAIE-------TAINLGMESHVTVHT 170
A LG I G + Y + +A NL E +
Sbjct: 106 AEELGCDYIATGHYALIEYNEEKGIY-----ELKKASNSNKDQTYVMYNLSQEKLSKILF 160
Query: 171 PLMWLKKYETWKLAQDIG 188
P+ K + ++A++IG
Sbjct: 161 PIGKYNKDQIREMAKEIG 178
>gi|145593248|ref|YP_001157545.1| argininosuccinate synthase [Salinispora tropica CNB-440]
gi|145302585|gb|ABP53167.1| Argininosuccinate synthase [Salinispora tropica CNB-440]
Length = 408
Score = 42.9 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRK 58
M+ AP ++L FSGG D+S L W +R+ R+ + GQ EL+ +
Sbjct: 1 MSSRNTIAPQHIVLAFSGGLDTSVALVWLKERYHCRLTAFIANLGQ--GAELDTAARKAE 58
Query: 59 KIVELMPKWKDSLGE 73
K+ + D GE
Sbjct: 59 KLGADEVRVADLRGE 73
>gi|312130969|ref|YP_003998309.1| argininosuccinate synthase [Leadbetterella byssophila DSM 17132]
gi|311907515|gb|ADQ17956.1| Argininosuccinate synthase [Leadbetterella byssophila DSM 17132]
Length = 400
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 20/131 (15%)
Query: 9 PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV---ELM 64
+L FSGG D S D+ V ++ D G E+ +
Sbjct: 2 KKVVLAFSGGLDTSFCVKYLKDDKGMEVHSVLVDTGGFTDEEVADIEKKAYDLGVKTHYT 61
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LA 123
+ D +D I L + +++ +V+ + IF A A
Sbjct: 62 ARVADKYYKDCIRFLIFGNVLKNNTYPLSVSAER---------------IFQAVAVAEYA 106
Query: 124 YRLGITNIVIG 134
+G T I G
Sbjct: 107 KSIGATAIAHG 117
>gi|331214035|ref|XP_003319699.1| argininosuccinate synthase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298689|gb|EFP75280.1| argininosuccinate synthase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 432
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ LL +SGG D+S L+W +++ V D GQ + + + K+
Sbjct: 1 MVSSQGRVLLAYSGGLDTSCILAWLIEQGYEVVAFMADVGQ--EEDFKAAEAKALKVGA 57
>gi|257063219|ref|YP_003142891.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Slackia heliotrinireducens DSM 20476]
gi|256790872|gb|ACV21542.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Slackia heliotrinireducens DSM 20476]
Length = 353
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 43/134 (32%), Gaps = 14/134 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
L+ SGG DSS L + V + + Y + R + +
Sbjct: 1 MVQRVLVGMSGGVDSSVTAYLLLRQGYEVVGATMNLYDPGRLGVPDVRDGESNDLEDARS 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIF-LVFAA 120
H+L G +++ + A D PN P R++ F L+ A
Sbjct: 61 VANRLGIAHHVLD---FGCEFENNVVRPFAQAYADGLTPN---PCIACNRHLKFGLMLKA 114
Query: 121 TLAYRLGITNIVIG 134
A LG I G
Sbjct: 115 --ARELGCDGIATG 126
>gi|291459813|ref|ZP_06599203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oribacterium sp. oral taxon 078 str. F0262]
gi|291417603|gb|EFE91322.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 363
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
AL+ SGG DSS + +R ++
Sbjct: 1 MGKKALVAMSGGVDSSVAAALMKERGYDCIGVT 33
>gi|50285935|ref|XP_445396.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524700|emb|CAG58302.1| unnamed protein product [Candida glabrata]
Length = 420
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W L++ V D GQ + + E KI
Sbjct: 1 MSKGK--VCLAYSGGLDTSIILAWLLEQGYEVVAFMADVGQ--EEDFEAARAKALKIGA 55
>gi|85707500|ref|ZP_01038577.1| hypothetical protein ROS217_02745 [Roseovarius sp. 217]
gi|85667980|gb|EAQ22864.1| hypothetical protein ROS217_02745 [Roseovarius sp. 217]
Length = 446
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 148 HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGK 207
IR++ + + VT+ P + K E +A++ G +DL+ + S +C
Sbjct: 276 PHFIRSMSQLVT-ALGVDVTLENPYRFKTKGE---MARECGDRDLLAELAPVSMSCSHPA 331
Query: 208 RDK-RYEWGYGCNSCPACYLRQKGWM 232
+ + C C C +R+
Sbjct: 332 QVRFESAPPQHCGRCVPCLIRRASLA 357
>gi|332157834|ref|YP_004423113.1| hypothetical protein PNA2_0192 [Pyrococcus sp. NA2]
gi|331033297|gb|AEC51109.1| hypothetical protein PNA2_0192 [Pyrococcus sp. NA2]
Length = 260
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+LFSGG+DSS L V L+F
Sbjct: 20 QEKILVLFSGGKDSSLTLYLLKRAGLDVAALTF 52
>gi|329962376|ref|ZP_08300380.1| tRNA(Ile)-lysidine synthetase [Bacteroides fluxus YIT 12057]
gi|328530099|gb|EGF56984.1| tRNA(Ile)-lysidine synthetase [Bacteroides fluxus YIT 12057]
Length = 423
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 56/203 (27%), Gaps = 43/203 (21%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N + L+ SGG DS L L E ++ R E + + +
Sbjct: 13 NRLFSPEEKILVALSGGADSVALLHLLLSAGYTCEAAHCNFHLR-DAESDRDEAFVRNLC 71
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV-PGRNIIFLVFAA 120
H+ + D + +++++++ L + R
Sbjct: 72 ----------NARHVPLHTVHFDTKREAEERHISIEMAARELRYAWFEEIR--------- 112
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTP 171
+ G I + + D + + G + V P
Sbjct: 113 ---KKCGAGVIAVAHHQDDS----------VETFLLNLIRGTGINGLRGIRPKNGKVVRP 159
Query: 172 LMWLKKYETWKLAQDIGGQDLVN 194
L+ + + E + IG + +
Sbjct: 160 LLCIGRKEIISYLESIGQAYVTD 182
>gi|323477855|gb|ADX83093.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus HVE10/4]
Length = 373
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 31/185 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKV-ELECRLCVRKKIVELMPKW 67
++LFSGG DS + R L+F+ G ++ LE +RK K
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G D ++ L+ + + + K + A L +
Sbjct: 232 FIVNGTDVLIKLSQIEKRNRVVMLKR--------------------VMYKVAERLCDKAN 271
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+I G + S + + + PL+ K E +LA+ I
Sbjct: 272 AKSITTGESLSQVSS---------QTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322
Query: 188 GGQDL 192
G +
Sbjct: 323 GTYEY 327
>gi|323475123|gb|ADX85729.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus REY15A]
Length = 373
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 31/185 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKV-ELECRLCVRKKIVELMPKW 67
++LFSGG DS + R L+F+ G ++ LE +RK K
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G D ++ L+ + + + K + A L +
Sbjct: 232 FIVNGTDVLIKLSQIEKRNRVVMLKR--------------------VMYKVAERLCDKAN 271
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+I G + S + + + PL+ K E +LA+ I
Sbjct: 272 AKSITTGESLSQVSS---------QTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322
Query: 188 GGQDL 192
G +
Sbjct: 323 GTYEY 327
>gi|295096797|emb|CBK85887.1| [ThiS-adenylate] sulfurtransferase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 482
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISHDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 DLARKIGTEDFART 339
>gi|227828032|ref|YP_002829812.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus M.14.25]
gi|259518610|sp|C3MXI0|THII_SULIM RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|227459828|gb|ACP38514.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus M.14.25]
Length = 373
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 31/185 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKV-ELECRLCVRKKIVELMPKW 67
++LFSGG DS + R L+F+ G ++ LE +RK K
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G D ++ L+ + + + K + A L +
Sbjct: 232 FIVNGTDVLIKLSQIEKRNRVVMLKR--------------------VMYKVAERLCDKAN 271
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+I G + S + + + PL+ K E +LA+ I
Sbjct: 272 AKSITTGESLSQVSS---------QTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322
Query: 188 GGQDL 192
G +
Sbjct: 323 GTYEY 327
>gi|227830769|ref|YP_002832549.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus L.S.2.15]
gi|259518607|sp|C3MR91|THII_SULIL RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|227457217|gb|ACP35904.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus L.S.2.15]
Length = 373
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 31/185 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKV-ELECRLCVRKKIVELMPKW 67
++LFSGG DS + R L+F+ G ++ LE +RK K
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G D ++ L+ + + + K + A L +
Sbjct: 232 FIVNGTDVLIKLSQIEKRNRVVMLKR--------------------VMYKVAERLCDKAN 271
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+I G + S + + + PL+ K E +LA+ I
Sbjct: 272 AKSITTGESLSQVSS---------QTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322
Query: 188 GGQDL 192
G +
Sbjct: 323 GTYEY 327
>gi|219870478|ref|YP_002474853.1| thiamine biosynthesis protein ThiI [Haemophilus parasuis SH0165]
gi|219690682|gb|ACL31905.1| thiamine biosynthesis protein ThiI/thiamine biosynthesis ATP
pyrophosphatase [Haemophilus parasuis SH0165]
Length = 483
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSSSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKTSDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|229579665|ref|YP_002838064.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus Y.G.57.14]
gi|229581669|ref|YP_002840068.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus Y.N.15.51]
gi|284998283|ref|YP_003420051.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus L.D.8.5]
gi|259518612|sp|C3NG28|THII_SULIN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|259518615|sp|C3N7E8|THII_SULIY RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|228010380|gb|ACP46142.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus Y.G.57.14]
gi|228012385|gb|ACP48146.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus Y.N.15.51]
gi|284446179|gb|ADB87681.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus L.D.8.5]
Length = 373
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 31/185 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKV-ELECRLCVRKKIVELMPKW 67
++LFSGG DS + R L+F+ G ++ LE +RK K
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G D ++ L+ + + + K + A L +
Sbjct: 232 FIVNGTDVLIKLSQIEKRNRVVMLKR--------------------VMYKVAERLCDKAN 271
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+I G + S + + + PL+ K E +LA+ I
Sbjct: 272 AKSITTGESLSQVSS---------QTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322
Query: 188 GGQDL 192
G +
Sbjct: 323 GTYEY 327
>gi|315171359|gb|EFU15376.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
Length = 400
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 78/241 (32%), Gaps = 42/241 (17%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIV 61
+I + LFSGG DS A ++ +S DY G NK E R V
Sbjct: 105 EIPSSQKQCITLFSGGLDS-----LAGAYYNFSNNISSDYVGYVNKSEE------RTHQV 153
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L + I +N + + +T R++++L A +
Sbjct: 154 QLQAFYSQ-----------IFSAGGSEVDIRNKYQQSKKFYFQST----RSLLYLSLAIS 198
Query: 122 LAYRLGITNIVI---GVCET--DYSGYPDCR--HDTIRAIETAINLGMESHVTVHTPLMW 174
A I + G+ ++ Y TI + M + +
Sbjct: 199 RAISNSTNEIRMYENGILSLNPEFGRYTTKTTHPKTIFLYNELLT-AMGYDIRI------ 251
Query: 175 LKKYETWKLAQDIGGQDL-VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
L K+E + I D+ + + TC + K Y C +C C LR+
Sbjct: 252 LNKFEYQTKGEVIANMDMAFKSEIRNTFTCGRSRAGKDYNHNGQCGTCIPCILRKISLAA 311
Query: 234 F 234
+
Sbjct: 312 Y 312
>gi|257126527|ref|YP_003164641.1| NAD+ synthetase [Leptotrichia buccalis C-1013-b]
gi|257050466|gb|ACV39650.1| NAD+ synthetase [Leptotrichia buccalis C-1013-b]
Length = 245
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 45/199 (22%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
+ K A++ SGG DSS + AL R + V + G ++ ++ KK
Sbjct: 17 EENGKNCKAVVGISGGTDSSVVAALCVAALGR-ENVIGVLMPKGTQHDIDFS------KK 69
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+VE + + + P+ L ++ S + + + + T P R + A
Sbjct: 70 LVEFLQIKHYEINVEK--PVNDLKELIFS----QIGVDPDEFDAYKTNQPAR----IRMA 119
Query: 120 ATLAYRLGITNIVIGVCE------TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
GI+ ++ G DY GY A +P+
Sbjct: 120 VLY----GISAVIGGRVANTCNLSEDYVGY---STKFGDAAGD------------FSPIS 160
Query: 174 WLKKYETWKLAQDIGGQDL 192
K E KL ++G ++
Sbjct: 161 DFTKTEVRKLGAELGLPEM 179
>gi|332558047|ref|ZP_08412369.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides WS8N]
gi|332275759|gb|EGJ21074.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides WS8N]
Length = 379
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 9/104 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
A ++ SGG DSS + V ++ Y + + C + I +
Sbjct: 17 ATRVVVAMSGGVDSSVVAAELAAEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRV 76
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
+ ++L ++ + V + D L T VP
Sbjct: 77 AETMGFPHYVLDY-------ENTFREAVIDEFADAYLAGATPVP 113
>gi|253582177|ref|ZP_04859400.1| tRNA-specific 2-thiouridylase mnmA 1 [Fusobacterium varium ATCC
27725]
gi|251835716|gb|EES64254.1| tRNA-specific 2-thiouridylase mnmA 1 [Fusobacterium varium ATCC
27725]
Length = 362
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
M D + + + SGG DSST + V ++
Sbjct: 16 MYDENNQNTTIAVAMSGGVDSSTVAYLLKKQGYNVFGIT 54
>gi|254425319|ref|ZP_05039037.1| asparagine synthase (glutamine-hydrolyzing) [Synechococcus sp. PCC
7335]
gi|196192808|gb|EDX87772.1| asparagine synthase (glutamine-hydrolyzing) [Synechococcus sp. PCC
7335]
Length = 496
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DSS + + + SF G + +L V + + + ++ S
Sbjct: 224 VFLSGGLDSSIVAALMKQQVKELH--SFSVGLSHSPDLRAARLVAEHLGTVHHEYVYSEA 281
Query: 73 EDHIL--PLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
E + + + +L ++ + L + +V
Sbjct: 282 EMQTVLSDVIYYLESYDPALVRSAIPCYMVSRLASEYV 319
>gi|148826939|ref|YP_001291692.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittGG]
gi|189030632|sp|A5UEV3|THII_HAEIG RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|148718181|gb|ABQ99308.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittGG]
Length = 485
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|145641596|ref|ZP_01797173.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae R3021]
gi|145273643|gb|EDK13512.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 22.4-21]
Length = 485
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|145636148|ref|ZP_01791818.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittHH]
gi|145270670|gb|EDK10603.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittHH]
Length = 485
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|114571455|ref|YP_758135.1| argininosuccinate synthase [Maricaulis maris MCS10]
gi|119361286|sp|Q0AKJ6|ASSY_MARMM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|114341917|gb|ABI67197.1| argininosuccinate synthase [Maricaulis maris MCS10]
Length = 410
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W D +D V T + D GQ ++E R + E+
Sbjct: 5 KPVKKVVLAYSGGLDTSVILKWLQDAYDAEVVTFTADLGQGEELEPARRKAEAAGVSEIF 64
>gi|91085987|ref|XP_972131.1| PREDICTED: similar to tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Tribolium castaneum]
Length = 417
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 45/134 (33%), Gaps = 12/134 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ ++ SGG DS+ R ++ + Q + E C +
Sbjct: 1 MLNIRKVVVGISGGVDSAVAALLLKKRGYDIQGVFM---QNWDIADEKGYCSADADYKDA 57
Query: 65 PKWKDSLGEDHILPLAILGDISH--SSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAAT 121
D L + L + + H + + N+ + + N PN V RNI F +
Sbjct: 58 ALVCDKLD----IKLTHVNFVKHYWNEVFSNLIKEYETGNTPNPDVLCNRNIKF-NYFYK 112
Query: 122 LAY-RLGITNIVIG 134
A LG I G
Sbjct: 113 YARNELGADAIATG 126
>gi|83593359|ref|YP_427111.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodospirillum rubrum ATCC 11170]
gi|123526416|sp|Q2RSS1|MNMA_RHORT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|83576273|gb|ABC22824.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodospirillum rubrum ATCC 11170]
Length = 377
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 21/135 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL--ECRLCVRKKIVELMPK 66
++ SGG DSS + ++ V L+ Y + L R C + + +
Sbjct: 14 RVVVAMSGGVDSSVTAALLKEQGHDVVGLTMRLYD--HGKPLGPGARTCCAGQDIHDARR 71
Query: 67 WKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFA 119
D LG H +L + + A P N V R+++
Sbjct: 72 VADRLGIAHYVLD---YESRFREDVIEPFAASYGRGETPIPCVLCNQTVKFRDLL----- 123
Query: 120 ATLAYRLGITNIVIG 134
A LG T + G
Sbjct: 124 -AAALDLGGTALATG 137
>gi|52425117|ref|YP_088254.1| thiamine biosynthesis protein ThiI [Mannheimia succiniciproducens
MBEL55E]
gi|81825551|sp|Q65TP1|THII_MANSM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|52307169|gb|AAU37669.1| ThiI protein [Mannheimia succiniciproducens MBEL55E]
Length = 486
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMFIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W G + +AI + + + + V R + + A+ +A
Sbjct: 225 YHIWNRYSGSHKVRFVAINFENVVGEILEKIDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R GI IV G S + + + + V PL+ K +
Sbjct: 277 ERFGIQAIVTGEALGQVSS---------QTLTNLRLIDEAASALVLRPLITHDKEAIIAM 327
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 328 AKQIGTDDI 336
>gi|309973119|gb|ADO96320.1| Thiamine biosynthesis protein ThiI [Haemophilus influenzae R2846]
Length = 485
Score = 42.9 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|260438503|ref|ZP_05792319.1| thiamine biosynthesis/tRNA modification protein ThiI [Butyrivibrio
crossotus DSM 2876]
gi|292809092|gb|EFF68297.1| thiamine biosynthesis/tRNA modification protein ThiI [Butyrivibrio
crossotus DSM 2876]
Length = 393
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 60/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A LL SGG DS R ++ + F + ++K+V+L
Sbjct: 176 PVGTNGKATLLLSGGIDSPVAGYMIAKRGVIIDAVYF-----HAPPYTS-DRAKQKVVDL 229
Query: 64 MPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ G H++ + + + I + A
Sbjct: 230 AKLVANYSGPINLHVVNFTDIQLYIYEQCPHDELTIIMRRY------------MMKIAEY 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + ++ G + + +++ + V PL+ + K E
Sbjct: 278 FALKEDSLGLITGESIGQVAS---------QTMQSLAVTNEVCTLPVLRPLVGMDKQEII 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+++ IG + L E+
Sbjct: 329 NISEKIGTYETSILPFEDC 347
>gi|90415927|ref|ZP_01223860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[marine gamma proteobacterium HTCC2207]
gi|90332301|gb|EAS47498.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[marine gamma proteobacterium HTCC2207]
Length = 370
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 49/138 (35%), Gaps = 21/138 (15%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE-LECRLCVRKKIVEL 63
++K ++ SGG DSS +++ VE L +N E E C K +
Sbjct: 1 MRKIEKVIVGMSGGVDSSVAALLLMEQGYSVEGLFM----KNWDEDDETEYCTAKADLAD 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFL 116
+ D LG L A ++ ++ + + PN P R I +FL
Sbjct: 57 AQQVCDKLGI--TLHTANFAADYWDNVFEHFLEEYRAGRTPN---PDILCNREIKFKVFL 111
Query: 117 VFAATLAYRLGITNIVIG 134
A LG I G
Sbjct: 112 D----YAQILGADAIATG 125
>gi|77463173|ref|YP_352677.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides 2.4.1]
gi|123592152|sp|Q3J358|MNMA_RHOS4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|77387591|gb|ABA78776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacter sphaeroides 2.4.1]
Length = 379
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + + C + I + +
Sbjct: 19 RVVVAMSGGVDSSVVAAELAAEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
++L ++ + V + D L T VP
Sbjct: 79 TMGFPHYVLDY-------ENTFREAVIDEFADAYLAGATPVP 113
>gi|320449292|ref|YP_004201388.1| NAD+ synthetase [Thermus scotoductus SA-01]
gi|320149461|gb|ADW20839.1| NAD+ synthetase [Thermus scotoductus SA-01]
Length = 281
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 36/187 (19%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++ SGG DS+T L+ A+ R V L R+ L + E
Sbjct: 38 EKAIVAVSGGVDSATTLALAVRALGRKQVHALFL--PHRDSSPLSREH--AYLVAETFGV 93
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + ++ ++++T ++ + N + R + ++F + AY+
Sbjct: 94 DLEEVDITPMVE-------GYAAMTPDLTPHRKGNLM------ARARMMVLFDKSQAYQ- 139
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+ G GY G ++ PL L K + W LA+
Sbjct: 140 -ALPLGTGNKTERLFGY------FT-------WHGDDTPP--VNPLGDLYKTQVWGLARH 183
Query: 187 IGGQDLV 193
+G V
Sbjct: 184 LGVPQAV 190
>gi|313899166|ref|ZP_07832687.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium sp. HGF2]
gi|312956035|gb|EFR37682.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium sp. HGF2]
Length = 393
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
++ + LL SGG DS+ ++ V
Sbjct: 4 QVMNMSQKVLLGLSGGVDSAVAAYLLKEQGYDVTC 38
>gi|297616542|ref|YP_003701701.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Syntrophothermus lipocalidus DSM 12680]
gi|297144379|gb|ADI01136.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Syntrophothermus lipocalidus DSM 12680]
Length = 340
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 12/73 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ +L SGG DS ++ V L+ L V +K E+
Sbjct: 1 MSERVAVLMSGGVDSGVAALLLKEQGYDVIGLTM---------LNWSAEVCQKAAEVARF 51
Query: 67 WKDSLGEDHILPL 79
S H++ L
Sbjct: 52 LGIS---HHVVDL 61
>gi|322417767|ref|YP_004196990.1| Thiamine biosynthesis protein-like protein [Geobacter sp. M18]
gi|320124154|gb|ADW11714.1| Thiamine biosynthesis protein-like protein [Geobacter sp. M18]
Length = 334
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ L SGG DS+ + L++ VE L+F
Sbjct: 1 MQRKAIALLSGGLDSTLAVKVLLEQGIAVEALNF 34
>gi|303317558|ref|XP_003068781.1| argininosuccinate synthase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108462|gb|EER26636.1| argininosuccinate synthase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038769|gb|EFW20704.1| argininosuccinate synthase [Coccidioides posadasii str. Silveira]
Length = 421
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ LL +SGG D+S L+W +++ V D GQ + E + KK+V
Sbjct: 1 MANKEKVLLAYSGGLDTSCILAWLIEQGHEVVCFLADVGQAEDFKEAERKALAIGAKKLV 60
>gi|126726432|ref|ZP_01742273.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacterales bacterium HTCC2150]
gi|126704295|gb|EBA03387.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacterales bacterium HTCC2150]
Length = 377
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V ++ Y + + C + I + +
Sbjct: 19 RVVVAMSGGVDSSVVAAVLAEQGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 78
Query: 69 DSLGEDHILP 78
++L
Sbjct: 79 TMGFPHYVLD 88
>gi|326559941|gb|EGE10340.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 103P14B1]
Length = 430
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 43/198 (21%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVE 62
+ L L SGG DS + R RV F+ GQ + EL +
Sbjct: 117 PMSTQEDVLSLISGGFDSGVASHMFMRRGSRVHYCFFNLGGQAH--ELGVKQMAYH---- 170
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
W + + + + + + K + L + + A+ +
Sbjct: 171 ---LWSRYSLSHKVWFITVDFEPVVAEILKTIDDGHMGVVLKC--------MMVKAASQI 219
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMW 174
A ++ I +V G A+ + + + + PL+
Sbjct: 220 AQQIKIQALVTG-----------------EAMGQVASQTLTNLNAIDAASSTLILRPLIT 262
Query: 175 LKKYETWKLAQDIGGQDL 192
K + K+A+ IG ++
Sbjct: 263 SDKEDIIKMAEKIGTANI 280
>gi|220906770|ref|YP_002482081.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. PCC 7425]
gi|219863381|gb|ACL43720.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cyanothece sp. PCC 7425]
Length = 368
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 26/142 (18%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVR 57
+ ++ S ++ SGG DSS + + RV L+ GQ C
Sbjct: 6 QNQTEQNKSVVVGLSGGVDSSVAAASLHHQGYRVVGLTLWLMKGKGQ----------CCS 55
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI 113
+ +V+ ++ HI+ ++ S + + D T +P R +
Sbjct: 56 EGLVDAAQLCEELGVPHHIVDS---RELFQSQIVDYLVAGYSDG---ITPLPCSQCNRTV 109
Query: 114 IFLVFAATLAYR-LGITNIVIG 134
F A LGI I G
Sbjct: 110 KFGPM-LHYAQTELGIETIATG 130
>gi|89072449|ref|ZP_01159028.1| galactosyl transferase, GDP-mannosepyrophosphorylase,
phosphomannomutase [Photobacterium sp. SKA34]
gi|89051981|gb|EAR57433.1| galactosyl transferase, GDP-mannosepyrophosphorylase,
phosphomannomutase [Photobacterium sp. SKA34]
Length = 562
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
A+ SGG DS ++ L R ++E ++F Y QR++ E+ + + L
Sbjct: 238 AISTLSGGLDSRVIVAELLKRGIKLECMNFSY-QRSQDEVYAEVFAQCHDFPLHIVNVSD 296
Query: 71 LGEDHI 76
E I
Sbjct: 297 TQEHSI 302
>gi|323335655|gb|EGA76938.1| Arg1p [Saccharomyces cerevisiae Vin13]
Length = 415
Score = 42.9 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W LD+ V + GQ + + + KI
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLDQGYEVVAFMANVGQ--EEDFDAAKEKALKIGA 55
>gi|225570688|ref|ZP_03779711.1| hypothetical protein CLOHYLEM_06788 [Clostridium hylemonae DSM
15053]
gi|225160515|gb|EEG73134.1| hypothetical protein CLOHYLEM_06788 [Clostridium hylemonae DSM
15053]
Length = 361
Score = 42.9 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 14/86 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVEL-----------EC 52
+ ++ SGG DSS ++ V ++ Q R E +
Sbjct: 2 EKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEEERAVQEENGGCCGLSAVDDA 61
Query: 53 RLCVRKKIVELMPKWKDSLGEDHILP 78
R + + ++H++
Sbjct: 62 RRVAAQLGIPYYVMNFRQEFKEHVID 87
>gi|163758747|ref|ZP_02165834.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hoeflea phototrophica DFL-43]
gi|162284037|gb|EDQ34321.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hoeflea phototrophica DFL-43]
Length = 401
Score = 42.9 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 4/129 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DSS V ++ Y V C + I +
Sbjct: 16 RDTRVVVAMSGGVDSSVVAGLLAREGYDVLGVTLQLYDHGAAVHRAGACCAGQDIDDARR 75
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++L ++ A P V + A
Sbjct: 76 VCEVLGIPHYVLD---YEKRFQEAVINPFAESYVAGETPIPCVACNQTVKFADLLATARD 132
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 133 LGADALATG 141
>gi|330443730|ref|NP_014583.2| Arg1p [Saccharomyces cerevisiae S288c]
gi|151945576|gb|EDN63817.1| arginosuccinate synthetase [Saccharomyces cerevisiae YJM789]
gi|190407287|gb|EDV10554.1| arginosuccinate synthetase [Saccharomyces cerevisiae RM11-1a]
gi|256273935|gb|EEU08854.1| Arg1p [Saccharomyces cerevisiae JAY291]
gi|259149426|emb|CAY86230.1| Arg1p [Saccharomyces cerevisiae EC1118]
gi|323303151|gb|EGA56953.1| Arg1p [Saccharomyces cerevisiae FostersB]
gi|323307083|gb|EGA60366.1| Arg1p [Saccharomyces cerevisiae FostersO]
gi|323331674|gb|EGA73088.1| Arg1p [Saccharomyces cerevisiae AWRI796]
gi|323352336|gb|EGA84871.1| Arg1p [Saccharomyces cerevisiae VL3]
gi|329138973|tpg|DAA10725.2| TPA: Arg1p [Saccharomyces cerevisiae S288c]
Length = 420
Score = 42.9 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W LD+ V + GQ + + + KI
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLDQGYEVVAFMANVGQ--EEDFDAAKEKALKIGA 55
>gi|150397798|ref|YP_001328265.1| tRNA-specific 2-thiouridylase MnmA [Sinorhizobium medicae WSM419]
gi|205828972|sp|A6UCQ0|MNMA_SINMW RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|150029313|gb|ABR61430.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sinorhizobium medicae WSM419]
Length = 398
Score = 42.9 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 50/190 (26%), Gaps = 14/190 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y V C + I + +
Sbjct: 14 RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ A P V + A LG
Sbjct: 74 TIGIPHYVLD---YEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGA 130
Query: 129 TNIVIGVCETDYSG----YPDC----RHDTIRAIETAINLGMESHV--TVHTPLMWLKKY 178
+ G YP R ++ + PL L K
Sbjct: 131 DALATGHYIRSRPSPMPRYPGQRALYRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKS 190
Query: 179 ETWKLAQDIG 188
ET LA+++G
Sbjct: 191 ETRALAEEMG 200
>gi|134045404|ref|YP_001096890.1| PP-loop domain-containing protein [Methanococcus maripaludis C5]
gi|132663029|gb|ABO34675.1| PP-loop domain protein [Methanococcus maripaludis C5]
Length = 296
Score = 42.9 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELM 64
K +++ SGG+DS+ L+ A + V + F +K + KK+ +
Sbjct: 37 KDEKIIVMLSGGKDSAVSLAVAKELGLNVHLCVHF----VHKWSWDISTNEAKKLADRF 91
>gi|1703453|sp|P22768|ASSY_YEAST RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|984184|emb|CAA62528.1| argininosuccinate synthase [Saccharomyces cerevisiae]
gi|1419871|emb|CAA99067.1| ARG1 [Saccharomyces cerevisiae]
Length = 420
Score = 42.9 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W LD+ V + GQ + + + KI
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLDQGYEVVAFMANVGQ--EEDFDAAKEKALKIGA 55
>gi|291563949|emb|CBL42765.1| thiazole biosynthesis/tRNA modification protein ThiI
[butyrate-producing bacterium SS3/4]
Length = 407
Score = 42.5 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 58/199 (29%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I A A+LL SGG DS R ++ F + ++K+V+L
Sbjct: 190 PIGTAGRAMLLLSGGIDSPVAGWMIAKRGVTIDATYF-----HAPPYTSE-RAKQKVVDL 243
Query: 64 MPKWKDSLGEDH--ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G I+ + + + I + A T
Sbjct: 244 AKLVAKYTGPIRLNIINFTDIQLYIYDQCPHDELTIIMRRY------------MMKIAET 291
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A +V G + + +++ + V PL+ K +
Sbjct: 292 IAKENDCLALVTGESIGQVAS---------QTMQSLAVTNEVCELPVMRPLIAFDKQDIV 342
Query: 182 KLAQDIGGQDLVNLILEES 200
++ IG + L E+
Sbjct: 343 DISLKIGTYETSVLPYEDC 361
>gi|148379169|ref|YP_001253710.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. ATCC 3502]
gi|153931319|ref|YP_001383546.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A str.
ATCC 19397]
gi|153936775|ref|YP_001387095.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A str.
Hall]
gi|205810260|sp|A7FT69|MNMA1_CLOB1 RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|205810283|sp|A5I123|MNMA1_CLOBH RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|148288653|emb|CAL82734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. ATCC 3502]
gi|152927363|gb|ABS32863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. ATCC 19397]
gi|152932689|gb|ABS38188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. Hall]
Length = 356
Score = 42.5 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 5/130 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELM 64
L+ SGG DSS ++ V ++ Q ++ +E E C + +
Sbjct: 1 MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADAR 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+++ D ++ + + PN + I A
Sbjct: 61 RVANKIGIPFYVMN---FKDAFKRNVIDYFVDEYMEGRTPNPCIACNKFIKFSSFLDKAM 117
Query: 125 RLGITNIVIG 134
+GI + G
Sbjct: 118 AIGIDYVATG 127
>gi|119480067|ref|XP_001260062.1| argininosuccinate synthase [Neosartorya fischeri NRRL 181]
gi|119408216|gb|EAW18165.1| argininosuccinate synthase [Neosartorya fischeri NRRL 181]
Length = 416
Score = 42.5 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + FSGG D+S L W +D V + D GQ E +R+K ++L
Sbjct: 1 MSKGKVCVA-FSGGLDTSVILKWLIDEGYEVVAFTADVGQ-----EEDFDAIREKALKLG 54
Query: 65 PKWKD 69
+
Sbjct: 55 AVKCE 59
>gi|78042619|ref|YP_359927.1| hypothetical protein CHY_1081 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77994734|gb|ABB13633.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 338
Score = 42.5 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + L++ VE ++F
Sbjct: 3 KALALFSGGLDSTLAIKLILEQGVEVEAVNF 33
>gi|146301177|ref|YP_001195768.1| argininosuccinate synthase [Flavobacterium johnsoniae UW101]
gi|146155595|gb|ABQ06449.1| Argininosuccinate synthase [Flavobacterium johnsoniae UW101]
Length = 397
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 67/197 (34%), Gaps = 34/197 (17%)
Query: 9 PSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S CL ++ V T+ D G + EL ++
Sbjct: 2 KKVVLAYSGGLDTSYCLKYLKNEKGYEVHTVLVDTGGFSAEELSAIEKRAYELGSAQHAN 61
Query: 68 KDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF-AATLAY 124
L + D + I G++ + N P + R +F A A
Sbjct: 62 LTILDKYYDKAIKYLIFGNVLKN------------NTYPLSVSAER--VFQAIEAIKYAK 107
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
++G T I + +G +D IR I + + + TP+ L KL+
Sbjct: 108 KVGATAI---AHGSTGAG-----NDQIRF--DLIFQTIAPEIEIITPIRDL------KLS 151
Query: 185 QDIGGQDLVNLILEESH 201
+ L + S
Sbjct: 152 RQEEVDYLAQNGVHYSW 168
>gi|145638947|ref|ZP_01794555.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittII]
gi|145271919|gb|EDK11828.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittII]
gi|309750916|gb|ADO80900.1| Thiamine biosynthesis protein ThiI [Haemophilus influenzae R2866]
Length = 485
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSASHKVRFIAINFEGIVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEASGALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|118444647|ref|YP_878354.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium novyi NT]
gi|205813888|sp|A0Q152|MNMA_CLONN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|118135103|gb|ABK62147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium novyi NT]
Length = 350
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 24/136 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++K + + SGG DSS ++ + ++ ++ + E
Sbjct: 1 MVKMSKKVAVGLSGGVDSSVAAYLLKEKGYDLIGITM------------KVSCDLDVSED 48
Query: 64 MPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVF 118
K D LG +++ L + + + N A + PN P ++I F
Sbjct: 49 AKKVADKLGIPYYVIDLT---EEFKNKVIDNFAEEYLQGRTPN---PCAVCNKHIKFGAL 102
Query: 119 AATLAYRLGITNIVIG 134
A LG I G
Sbjct: 103 -IQKAKELGADYIATG 117
>gi|12045233|ref|NP_073044.1| thiamine biosynthesis protein ThiI [Mycoplasma genitalium G37]
gi|255660401|ref|ZP_05405810.1| thiamine biosynthesis protein ThiI [Mycoplasma genitalium G37]
gi|1351561|sp|P47612|THII_MYCGE RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|3844960|gb|AAC71599.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
genitalium G37]
gi|166078795|gb|ABY79413.1| thiamine biosynthesis/tRNA modification protein ThiI [synthetic
Mycoplasma genitalium JCVI-1.0]
Length = 385
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL+L SGG DS S + R ++ ++F
Sbjct: 179 KALVLLSGGIDSPVAASLVMQRGFNIDFITF 209
>gi|332881980|ref|ZP_08449621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332680106|gb|EGJ53062.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 397
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLKEQGYEVIGL 31
>gi|315223915|ref|ZP_07865760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga ochracea F0287]
gi|314946087|gb|EFS98091.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga ochracea F0287]
Length = 397
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLKEQGYEVIGL 31
>gi|256820771|ref|YP_003142050.1| tRNA-specific 2-thiouridylase MnmA [Capnocytophaga ochracea DSM
7271]
gi|256582354|gb|ACU93489.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Capnocytophaga ochracea DSM 7271]
Length = 397
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLKEQGYEVIGL 31
>gi|213962751|ref|ZP_03391012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga sputigena Capno]
gi|213954746|gb|EEB66067.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga sputigena Capno]
Length = 397
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLKEQGYEVIGL 31
>gi|218246420|ref|YP_002371791.1| ExsB family protein [Cyanothece sp. PCC 8801]
gi|218166898|gb|ACK65635.1| ExsB family protein [Cyanothece sp. PCC 8801]
Length = 274
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 60/188 (31%), Gaps = 35/188 (18%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + AL+ +SGG DS+ A D DR ++ ELE I
Sbjct: 12 LFSQMEQALIAYSGGIDSTLVAKIAYDVLGDRALAITAVSPSLLPEELEEAKIQAATIG- 70
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
K L E H + + + L +T P L
Sbjct: 71 ----IKHELIETHEMDNPNYTSNPVN------RCYFCKSELHDTLKP------------L 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + G IV GV D Y R I+ A G S + + L K E +
Sbjct: 109 AIKRGYAYIVDGVNADDLQDY---RPG----IQAAKERGARSPLA----EVGLTKTEIRQ 157
Query: 183 LAQDIGGQ 190
L+Q +G
Sbjct: 158 LSQQLGLP 165
>gi|157813154|gb|ABV81322.1| putative GMP synthetase [Tanystylum orbiculare]
Length = 197
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG-QRNKVELECRLCVRKKIVELM 64
+ L+L SGG DS+ C + ++V + D G R + + +RK ++L
Sbjct: 43 SNKVLVLVSGGVDSTVCAALLHKALEQNQVIAVHIDNGFMRKQESKQVEESLRKLGLQLT 102
Query: 65 PKWKDSL 71
L
Sbjct: 103 VINAAHL 109
>gi|157363709|ref|YP_001470476.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga lettingae TMO]
gi|205828979|sp|A8F5H8|MNMA_THELT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|157314313|gb|ABV33412.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga lettingae TMO]
Length = 349
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DS+ L + +
Sbjct: 5 ILLSGGVDSAVALYQLKNEGYEIVAYH 31
>gi|126661854|ref|ZP_01732853.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
[Flavobacteria bacterium BAL38]
gi|126625233|gb|EAZ95922.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
[Flavobacteria bacterium BAL38]
Length = 395
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLKEQGYEVIGL 31
>gi|66522082|ref|XP_393336.2| PREDICTED: GMP synthase [glutamine-hydrolyzing] [Apis mellifera]
Length = 718
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
LLL SGG DS+ C + ++V L + G
Sbjct: 240 NKKVLLLVSGGVDSTVCAALLHKALNKEQVIALHINNG 277
>gi|21358151|ref|NP_649674.1| CG1315 [Drosophila melanogaster]
gi|6685243|sp|O97069|ASSY_DROME RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|4389446|gb|AAD19816.1| argininosuccinate synthase-like [Drosophila melanogaster]
gi|23170640|gb|AAF54103.2| CG1315 [Drosophila melanogaster]
gi|223718736|gb|ACN22205.1| MIP05494p [Drosophila melanogaster]
Length = 419
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELM 64
+ +L +SGG D+S L W LD+ V + D GQ+ E + KK++ +
Sbjct: 3 KETVILAYSGGLDTSCVLKWLLDKQYEVICVLADVGQKEDFTAAEKKALKIGAKKVI--V 60
Query: 65 PKWKDSLGEDHILPLAILGDI 85
K S ED+I P +G +
Sbjct: 61 ADVKQSFVEDYIWPAVQMGLV 81
>gi|325848903|ref|ZP_08170413.1| argininosuccinate synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480547|gb|EGC83609.1| argininosuccinate synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 413
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ-RNKVELECRLCVRKKI 60
+I+ +A +L +SGG D+S ++W + V +S D GQ +N LE +K +
Sbjct: 7 EILNQAKKVVLAYSGGLDTSVMVTWLKENGAKEVICVSVDLGQVKNPDALE-----KKAL 61
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
K+ + ED + + + +NV
Sbjct: 62 KSGASKFYNVNVEDEFIDDYAFKTLKAGAKYENV 95
>gi|241667351|ref|ZP_04754929.1| argininosuccinate synthase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875902|ref|ZP_05248612.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254841923|gb|EET20337.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 418
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 15/127 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
LLL+SGG D+S L W + + V L+ D GQ +E + + ++ +
Sbjct: 20 RCLLLYSGGLDTSVMLKWIQEEYGVEVVALTIDIGQVADNLEQIKQKAINLGAIDAVVYD 79
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D ++ S Q +T + GR +I A +A +
Sbjct: 80 AKDRFADEVI-----------SKAIKANADYQGGYALSTPL-GR-VIISEIAVEVAKKYD 126
Query: 128 ITNIVIG 134
+ G
Sbjct: 127 CQVVAHG 133
>gi|170591100|ref|XP_001900309.1| GMP synthase [Brugia malayi]
gi|158592459|gb|EDP31059.1| GMP synthase, putative [Brugia malayi]
Length = 786
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L++ SGG DS+ C + DRV + D G
Sbjct: 328 KKVLVMVSGGVDSTVCAALLHKALGSDRVIAIHIDNG 364
>gi|50365230|ref|YP_053655.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mesoplasma florum L1]
gi|81612889|sp|Q6F152|MNMA_MESFL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|50363786|gb|AAT75771.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mesoplasma florum L1]
Length = 374
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + + VE L
Sbjct: 1 MKKKVIVGLSGGVDSSVAAYLLIQQGYEVEGL 32
>gi|293390004|ref|ZP_06634338.1| thiamine biosynthesis/tRNA modification protein ThiI
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950538|gb|EFE00657.1| thiamine biosynthesis/tRNA modification protein ThiI
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 485
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS L R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + +NV V R + + A+ +A
Sbjct: 225 YHIWQRYGSSHKVRFVAINFEGVVGEILENVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V V PL+ K + +
Sbjct: 277 QRFDIQAIVTGEVLGQVSS---------QTLTNLRLIDEAAEVLVLRPLITHDKEQIIVM 327
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 328 AKHIGTDDI 336
>gi|325973163|ref|YP_004250227.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma suis str. Illinois]
gi|323651765|gb|ADX97847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma suis str. Illinois]
Length = 369
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS-FDY-GQRNKVELECRLCVRK 58
M +++K ++ SGG DSS +V + ++ Q N++E++
Sbjct: 1 MGSLVEK--KVVIALSGGVDSSVAALLLKKEGYKVFGIHMINWDSQLNELEMDKECESLS 58
Query: 59 KIVELMPKWKDSL 71
K E L
Sbjct: 59 KDREYAELIAQQL 71
>gi|317402803|gb|EFV83347.1| tRNA-specific 2-thiouridylase mnmA [Achromobacter xylosoxidans
C54]
Length = 372
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ K ++ SGG DSS + V L
Sbjct: 1 MSQTSTKKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGL 38
>gi|295134637|ref|YP_003585313.1| argininosuccinate synthase [Zunongwangia profunda SM-A87]
gi|294982652|gb|ADF53117.1| argininosuccinate synthase [Zunongwangia profunda SM-A87]
Length = 393
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ +SGG D+S C + V +S + G +K E++ KKI K
Sbjct: 2 KKVVIAYSGGLDTSYCAKSLSNEGFEVHAVSVNTGGFSKEEVQKIGDNAKKIGATTYKNI 61
Query: 69 DSL 71
D++
Sbjct: 62 DAV 64
>gi|213409796|ref|XP_002175668.1| argininosuccinate synthase [Schizosaccharomyces japonicus yFS275]
gi|212003715|gb|EEB09375.1| argininosuccinate synthase [Schizosaccharomyces japonicus yFS275]
Length = 411
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M++ + +L +SGG D+S L+W +++ V + GQ + + E K+
Sbjct: 1 MSET--QVKRCVLAYSGGLDTSCILAWLIEQGWEVICYMANVGQ--EEDWEAAREKALKV 56
Query: 61 VE---LMPKWKDSLGEDHILPLAILGDISHS 88
+ ++ D ++P A I +
Sbjct: 57 GAKKVYIEDLREEFIRDTVIPAAQCNAIYEN 87
>gi|158338655|ref|YP_001519832.1| tRNA-specific 2-thiouridylase MnmA [Acaryochloris marina
MBIC11017]
gi|205810972|sp|B0CE39|MNMA_ACAM1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|158308896|gb|ABW30513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acaryochloris marina MBIC11017]
Length = 355
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V L+ Q C +V+ +
Sbjct: 2 KKVVVGLSGGVDSSVAAASLKEKGYEVIGLTLWLMQ------GKGQCCSDGLVDAAQLCE 55
Query: 69 DSLGEDHILPLAIL 82
D H++ L
Sbjct: 56 DLDIPHHVVDSRDL 69
>gi|14591705|ref|NP_143793.1| hypothetical protein PH1968 [Pyrococcus horikoshii OT3]
gi|3258412|dbj|BAA31095.1| 273aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 273
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKI 60
K A++ +SGG+DS L A +++ VE + D+G ++ V K +
Sbjct: 50 SKVDKAIVAYSGGKDSIVALYLAKEKYSIDVEAVMVDHGFIAPQAIKNAKNVAKYL 105
>gi|323346643|gb|EGA80928.1| Arg1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 420
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W LD+ V + GQ + + + KI
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLDQGYEVXAFMANVGQ--EEDFDAAKEKALKIGA 55
>gi|258515487|ref|YP_003191709.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Desulfotomaculum acetoxidans DSM 771]
gi|257779192|gb|ACV63086.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Desulfotomaculum acetoxidans DSM 771]
Length = 362
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
K ++ SGG DSS + L+ + ++
Sbjct: 2 KGKKVVVAMSGGVDSSVTAALLLEEGYEITGVT 34
>gi|89054998|ref|YP_510449.1| tRNA-specific 2-thiouridylase MnmA [Jannaschia sp. CCS1]
gi|122498420|sp|Q28PD8|MNMA_JANSC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|88864547|gb|ABD55424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Jannaschia sp. CCS1]
Length = 380
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + D V ++ Y + + C + I + +
Sbjct: 22 RVVVAMSGGVDSSAVAAQLADEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDAARVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++L ++ ++ A P VP
Sbjct: 82 TMGFPHYVLD---YENVFKDAVIDEFADSYLAGATP---VP 116
>gi|299531933|ref|ZP_07045333.1| tRNA-specific 2-thiouridylase MnmA [Comamonas testosteroni S44]
gi|298720108|gb|EFI61065.1| tRNA-specific 2-thiouridylase MnmA [Comamonas testosteroni S44]
Length = 376
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DS+ + V +
Sbjct: 1 MSNKQRVVVGLSGGVDSAVTAYLLKKQGHEVVGI 34
>gi|157813140|gb|ABV81315.1| putative GMP synthetase [Narceus americanus]
Length = 197
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL D++ + D G K E + KI
Sbjct: 43 NCKVLMLLSGGVDSTVCAALMWKALKE-DQIIAIHIDNGFMRKEESRQVEQMLHKI 97
>gi|116754202|ref|YP_843320.1| thiamine biosynthesis protein [Methanosaeta thermophila PT]
gi|116665653|gb|ABK14680.1| thiamine biosynthesis protein [Methanosaeta thermophila PT]
Length = 335
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 63/182 (34%), Gaps = 28/182 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS + R V L D + + E++ W
Sbjct: 131 LALISGGIDSPVAAWLIMRRGCPVALLHLD-----VSPYADSIEQVVRQAEVLQSWMSG- 184
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVPGRNIIFLVFAATLAYRLGITN 130
L LAI+ + A+++ + P T V R + + + RL
Sbjct: 185 ---RRLDLAIVRN--------ARAIEMISSRYPRETCVLCR-RLMYHISTLVMKRLRAKG 232
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
IV G + + I A + I V+ PL+ + K E +LA+ IG
Sbjct: 233 IVTGYSLGQVAS---QTPENIMAEQVGI------EAPVYHPLIAMDKTEIIELARRIGTY 283
Query: 191 DL 192
D+
Sbjct: 284 DI 285
>gi|289432183|ref|YP_003462056.1| hypothetical protein DehalGT_0233 [Dehalococcoides sp. GT]
gi|288945903|gb|ADC73600.1| conserved hypothetical protein [Dehalococcoides sp. GT]
Length = 638
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 74/239 (30%), Gaps = 49/239 (20%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++LFSGG DS L+ V L Q ++ + + K + +
Sbjct: 169 VMLFSGGLDSLAGAVELLEDSKDVICLVS--HQSQPGTVKTQNGLFKALKDAYSDRVRHY 226
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
L + + + T R ++ A +A
Sbjct: 227 QFKCSLVSTVNRAVEETQRT-------------------RAFLYTSIAYAIASSQRNPRF 267
Query: 132 VI---GVCETDYSGYPDCRHDTIRA-------------IETAINLGMESHVTVHTPLMWL 175
+ GV +++ R D I A ++ +L S V V TP ++
Sbjct: 268 YVHENGVTSLNFAR----RQDGINARTSRTTHPRTLSLLQDFFSLVHGSKVQVATPFLFK 323
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
K + ++ ++ NLI + +C K + C C C R+ + +
Sbjct: 324 TKSDIFR---ELSAHKRENLI-PSAVSC--SKTFLNRKQASHCGGCFQCIDRR--FASY 374
>gi|152993069|ref|YP_001358790.1| thiamine biosynthesis protein ThiI [Sulfurovum sp. NBC37-1]
gi|151424930|dbj|BAF72433.1| thiamin biosynthesis protein ThiI [Sulfurovum sp. NBC37-1]
Length = 486
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 25/181 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS+ + R + + F+ G + K V L W
Sbjct: 189 LSLMSGGFDSTVASYLTMKRGIKTHFIFFNLGG-------AAHEIGVKQVSLY-LWSRYG 240
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ +++ D + ++ A L + L+ A +A +GI +
Sbjct: 241 TSHPVRFISVPFDTVVEEIFRSTAETYMGVTLKR--------LMLMAAEKIANEMGIDAL 292
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
V G S + + + ++ V PL K + +A IG +
Sbjct: 293 VTGESVAQVSS---------QTLRNLALIDQVTNKLVLRPLATFNKPDIIDIATQIGTRY 343
Query: 192 L 192
Sbjct: 344 F 344
>gi|325262828|ref|ZP_08129564.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
sp. D5]
gi|324031922|gb|EGB93201.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
sp. D5]
Length = 404
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 58/199 (29%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ +A+LL SGG DS R + F + K +
Sbjct: 187 PVGTNGNAMLLLSGGIDSPVAGYMISKRGVGLHATYF-----HAPPYTSERAKEKVIDLA 241
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ ++ + + I I + + + ++ + A
Sbjct: 242 RLVSRYAGPVQLHVVNFTDIQLYIYEKCPHEELTIIMRRY-------------MMKIAEH 288
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A G ++ G + + +++ + V+ PL+ K E
Sbjct: 289 FAKENGCLGLITGESIGQVAS---------QTMQSLAATNAVCTLPVYRPLIGFDKREIV 339
Query: 182 KLAQDIGGQDLVNLILEES 200
++A+ I + E+
Sbjct: 340 EIAEKIDTYETSIQPFEDC 358
>gi|321475439|gb|EFX86402.1| hypothetical protein DAPPUDRAFT_187509 [Daphnia pulex]
Length = 410
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ K +L +SGG D+S L W + V + GQ E + KKI+
Sbjct: 1 MSKNERVILAYSGGLDTSCILVWLIQEGYDVICYLANIGQNEDFGAAEAKAMCLGAKKII 60
>gi|311246646|ref|XP_003122283.1| PREDICTED: argininosuccinate synthase-like [Sus scrofa]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|308510318|ref|XP_003117342.1| hypothetical protein CRE_01794 [Caenorhabditis remanei]
gi|308242256|gb|EFO86208.1| hypothetical protein CRE_01794 [Caenorhabditis remanei]
Length = 707
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 63/209 (30%), Gaps = 47/209 (22%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
L++ SGG DS+ C + RV + D G R+ E V K + L
Sbjct: 235 KKVLVMVSGGVDSAVCAALLSRALGPNRVTAIHIDNGFMRH----EESDAVEKSLAALNL 290
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF--LVF----- 118
SL + +++ + NTF+ +++I L
Sbjct: 291 PVHRYNYGTTFRSSGEHAQEGEMSLDECDDPELKRRIIGNTFIRVKDLIMKDLNITHEEY 350
Query: 119 --------------AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES 164
A+ LA I +T A+ + +
Sbjct: 351 FLAQGTLRPDLIESASALA-SGHADTIKTHHNDT------------------ALVRDLRN 391
Query: 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
V PL K E +L +D+G + +
Sbjct: 392 LGKVVEPLKDFHKDEVRELGKDLGLPEQI 420
>gi|304439798|ref|ZP_07399696.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304371785|gb|EFM25393.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 388
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 29/184 (15%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKWKDSLGEDHI 76
DS R +V+ L F + + K K+ E++ + + +
Sbjct: 188 IDSPVAGYMMAKRGVKVDALHF-----HSFPFTSKRAEEKVIKLGEIVSSYSGPMKIYSV 242
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
L I +I+ + T + R + A +++ + G +I+ G
Sbjct: 243 NILPIQKEINKHCHESQM-----------TVLSRR--FMMRIAESISAKNGYKSIITGEN 289
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
+ + IE + V PL+ + K + ++++ IG + L
Sbjct: 290 LGQVAS---------QTIEGLACTDAITDRLVFRPLIGMDKVDIIEISKRIGTYETSILP 340
Query: 197 LEES 200
E+
Sbjct: 341 FEDC 344
>gi|297271080|ref|XP_002800187.1| PREDICTED: argininosuccinate synthase-like [Macaca mulatta]
Length = 393
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|296191017|ref|XP_002743443.1| PREDICTED: argininosuccinate synthase isoform 1 [Callithrix
jacchus]
gi|296191019|ref|XP_002743444.1| PREDICTED: argininosuccinate synthase isoform 2 [Callithrix
jacchus]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|302504114|ref|XP_003014016.1| hypothetical protein ARB_07736 [Arthroderma benhamiae CBS 112371]
gi|291177583|gb|EFE33376.1| hypothetical protein ARB_07736 [Arthroderma benhamiae CBS 112371]
Length = 405
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKI 60
+ + LL +SGG D+S L+W L++ V D GQ + E + KK+
Sbjct: 312 AMAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQAEDFKEAERKALAVGAKKL 371
Query: 61 V 61
V
Sbjct: 372 V 372
>gi|264680822|ref|YP_003280732.1| Predicted tRNA(5-methylaminomethyl-2-
thiouridylate)methyltransferase [Comamonas testosteroni
CNB-2]
gi|262211338|gb|ACY35436.1| Predicted tRNA(5-methylaminomethyl-2-
thiouridylate)methyltransferase [Comamonas testosteroni
CNB-2]
Length = 376
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DS+ + V +
Sbjct: 1 MSNKQRVVVGLSGGVDSAVTAYLLKKQGHEVVGI 34
>gi|254577235|ref|XP_002494604.1| ZYRO0A05368p [Zygosaccharomyces rouxii]
gi|238937493|emb|CAR25671.1| ZYRO0A05368p [Zygosaccharomyces rouxii]
Length = 419
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W L++ V + GQ + + + KI
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVVAFLANVGQ--EEDFDAAREKALKIGA 55
>gi|238620262|ref|YP_002915088.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus M.16.4]
gi|259518604|sp|C4KIK6|THII_SULIK RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|238381332|gb|ACR42420.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus M.16.4]
Length = 373
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 56/181 (30%), Gaps = 31/181 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ--RNKVELECRLCVRKKIVELMPKW 67
++LFSGG DS + R L+F+ G K LE +RK K
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSIHRKFVLEELSVLRKWSGGHKLKL 231
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G D ++ L+ + + + K + A L +
Sbjct: 232 FIVNGTDVLIKLSQIEKRNRVVMLKR--------------------VMYKVAERLCDKAN 271
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+I G + S + + + PL+ K E +LA+ I
Sbjct: 272 AKSITTGESLSQVSS---------QTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322
Query: 188 G 188
G
Sbjct: 323 G 323
>gi|158259689|dbj|BAF85803.1| unnamed protein product [Homo sapiens]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|148700170|gb|EDL32117.1| mCG15755 [Mus musculus]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|119608340|gb|EAW87934.1| argininosuccinate synthetase, isoform CRA_c [Homo sapiens]
Length = 393
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|109111754|ref|XP_001095864.1| PREDICTED: argininosuccinate synthase-like isoform 4 [Macaca
mulatta]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|73967742|ref|XP_849895.1| PREDICTED: similar to Argininosuccinate synthase
(Citrulline--aspartate ligase) isoform 3 [Canis
familiaris]
gi|73967748|ref|XP_860201.1| PREDICTED: similar to Argininosuccinate synthase
(Citrulline--aspartate ligase) isoform 5 [Canis
familiaris]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|73967746|ref|XP_860166.1| PREDICTED: similar to argininosuccinate synthetase isoform 4
[Canis familiaris]
Length = 390
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|73967744|ref|XP_537813.2| PREDICTED: similar to argininosuccinate synthetase isoform 1
[Canis familiaris]
Length = 393
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|74146278|dbj|BAE28914.1| unnamed protein product [Mus musculus]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|197097364|ref|NP_001126812.1| argininosuccinate synthase [Pongo abelii]
gi|55732726|emb|CAH93061.1| hypothetical protein [Pongo abelii]
Length = 276
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|28872|emb|CAA25771.1| unnamed protein product [Homo sapiens]
gi|179057|gb|AAA51783.1| argininosuccinate synthetase [Homo sapiens]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|6996911|ref|NP_031520.1| argininosuccinate synthase [Mus musculus]
gi|114290|sp|P16460|ASSY_MOUSE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|309111|gb|AAA37266.1| argininosuccinate synthetase (EC 6.3.4.5) [Mus musculus]
gi|12805227|gb|AAH02074.1| Argininosuccinate synthetase 1 [Mus musculus]
gi|56270570|gb|AAH87556.1| Argininosuccinate synthetase 1 [Mus musculus]
gi|74144675|dbj|BAE27321.1| unnamed protein product [Mus musculus]
gi|123228123|emb|CAM24505.1| argininosuccinate synthetase 1 [Mus musculus]
gi|148676562|gb|EDL08509.1| mCG19004 [Mus musculus]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|25453414|ref|NP_037289.1| argininosuccinate synthase [Rattus norvegicus]
gi|114291|sp|P09034|ASSY_RAT RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|55767|emb|CAA30999.1| unnamed protein product [Rattus norvegicus]
gi|203016|gb|AAA40771.1| argininosuccinate synthetase [Rattus norvegicus]
gi|38648840|gb|AAH63146.1| Argininosuccinate synthetase 1 [Rattus norvegicus]
gi|149039053|gb|EDL93273.1| argininosuccinate synthetase [Rattus norvegicus]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|16950633|ref|NP_446464.1| argininosuccinate synthase [Homo sapiens]
gi|53759107|ref|NP_000041.2| argininosuccinate synthase [Homo sapiens]
gi|332255353|ref|XP_003276797.1| PREDICTED: argininosuccinate synthase isoform 1 [Nomascus
leucogenys]
gi|332255355|ref|XP_003276798.1| PREDICTED: argininosuccinate synthase isoform 2 [Nomascus
leucogenys]
gi|20141195|sp|P00966|ASSY_HUMAN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|14328059|gb|AAH09243.1| Argininosuccinate synthetase 1 [Homo sapiens]
gi|18203822|gb|AAH21676.1| Argininosuccinate synthetase 1 [Homo sapiens]
gi|19482138|gb|AAK67487.1| argininosuccinate synthetase [Homo sapiens]
gi|55958410|emb|CAI16160.1| argininosuccinate synthetase 1 [Homo sapiens]
gi|119608338|gb|EAW87932.1| argininosuccinate synthetase, isoform CRA_a [Homo sapiens]
gi|119608341|gb|EAW87935.1| argininosuccinate synthetase, isoform CRA_a [Homo sapiens]
gi|189054708|dbj|BAG37558.1| unnamed protein product [Homo sapiens]
gi|190690279|gb|ACE86914.1| argininosuccinate synthetase 1 protein [synthetic construct]
gi|190691653|gb|ACE87601.1| argininosuccinate synthetase 1 protein [synthetic construct]
gi|261858400|dbj|BAI45722.1| argininosuccinate synthetase 1 [synthetic construct]
Length = 412
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|292490681|ref|YP_003526120.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrosococcus halophilus Nc4]
gi|291579276|gb|ADE13733.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrosococcus halophilus Nc4]
Length = 347
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++K A+ L SGG DS ++ VE ++F
Sbjct: 1 MEKQRKAVALISGGLDSMLAAKVMQEQGIHVEGINF 36
>gi|262306037|gb|ACY45611.1| gln amidotransferase [Eumesocampa frigilis]
Length = 196
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG-QRNKVELECRLCVRK 58
+ LLL SGG DS+ C + AL D+V + D G R ++ +RK
Sbjct: 42 QNNKVLLLVSGGVDSTVCAALLNKALKE-DQVIAVHIDNGFMRKNESIKVEQSLRK 96
>gi|294939504|ref|XP_002782503.1| asparagine synthetase, putative [Perkinsus marinus ATCC 50983]
gi|239894109|gb|EER14298.1| asparagine synthetase, putative [Perkinsus marinus ATCC 50983]
Length = 540
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 13 LLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+LFSGG DS+T + AL+ DR V+ L+ R+ +L L +++ E+ + + L
Sbjct: 182 ILFSGGVDSTTLAALALEESDRQVDLLTASVDGRDSPDLRTALVSYQRLAEVYGRARVRL 241
>gi|315231707|ref|YP_004072143.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus barophilus
MP]
gi|315184735|gb|ADT84920.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus barophilus
MP]
Length = 307
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 64/202 (31%), Gaps = 35/202 (17%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIV 61
++K+ L++ SGG+DS+ +E L + G E + KK
Sbjct: 42 KLLKRDERILVVVSGGKDSAVVSYVLKKLGYNIECLYINLG---IGEYSAKSEEYAKKQC 98
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E++ + +L A +G++ S T + I + N F
Sbjct: 99 EMINAKLHIVRVRELL-GAGIGELKTSRPTCSY-CGITKRYIFNKF-------------- 142
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE---------TAINLGMESHVTVHTPL 172
AY G IV G D + + + + G V PL
Sbjct: 143 -AYDNGFDVIVTGHNLDDEASF-----IFGNIMNWNTQYLAKQGPLLPGEGKFVKKVKPL 196
Query: 173 MWLKKYETWKLAQDIGGQDLVN 194
+ + E A +G +V
Sbjct: 197 YEVTEREVVAYALAVGIDYMVE 218
>gi|55958409|emb|CAI16159.1| argininosuccinate synthetase 1 [Homo sapiens]
Length = 179
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|50365401|ref|YP_053826.1| thiamin biosynthesis protein [Mesoplasma florum L1]
gi|50363957|gb|AAT75942.1| thiamin biosynthesis protein [Mesoplasma florum L1]
Length = 400
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 67/190 (35%), Gaps = 24/190 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L L SGG DS + R V+ + F E L ++ +++ K+
Sbjct: 177 KGLSLLSGGIDSPVASFLTMKRGMHVDFIHFMTPPHTSPE---ALDKVFELAKIVSKYNS 233
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
++ ++L + + + T R + F+ A LA + G
Sbjct: 234 KKFNLYVCDFSML---------LQELQHMPEESYKITI--MRRM-FMRIANKLAKQNGQE 281
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G + TI++I+ + S + + P++ K E +++ I
Sbjct: 282 ALITGESLGQVAS------QTIQSIDV---INSTSELPILRPVLTYDKEEIILISKFIKS 332
Query: 190 QDLVNLILEE 199
+ L ++
Sbjct: 333 YETSILPFDD 342
>gi|315634332|ref|ZP_07889619.1| thiamine biosynthesis protein ThiI [Aggregatibacter segnis ATCC
33393]
gi|315476922|gb|EFU67667.1| thiamine biosynthesis protein ThiI [Aggregatibacter segnis ATCC
33393]
Length = 482
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS L R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + +NV V R + + A+ +A
Sbjct: 225 YHIWQRYGSSHKVRFVAINFEGVVGEILENVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V V PL+ K + +
Sbjct: 277 QRFDIQAIVTGEALGQVSS---------QTLTNLRLIDEAADVLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 328 AKHIGTDDI 336
>gi|309775683|ref|ZP_07670682.1| thiamine biosynthesis/tRNA modification protein ThiI
[Erysipelotrichaceae bacterium 3_1_53]
gi|308916589|gb|EFP62330.1| thiamine biosynthesis/tRNA modification protein ThiI
[Erysipelotrichaceae bacterium 3_1_53]
Length = 402
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 37/197 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+++ SGG DS + R +E + + + K++EL +
Sbjct: 183 KAMVMLSGGIDSPVASYLTMKRGVAIECVHY------ASPPYTSQAAQDKVLELARQIAP 236
Query: 70 SLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G H++P + + + ++ A+ I + A L +
Sbjct: 237 YQGHIRVHVVPFTDVQLAIYKNCDESYAITIMRR------------MMYRIAQRLCEQQH 284
Query: 128 ITNIV----IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
IV IG + T+ +++T + + V P+ + K E +
Sbjct: 285 CLAIVNGESIGQVAS----------QTLESMQTINCVTT---LPVIRPVACMDKVEIIDV 331
Query: 184 AQDIGGQDLVNLILEES 200
A++I D+ E+
Sbjct: 332 ARNIDTYDISIQPFEDC 348
>gi|228947430|ref|ZP_04109721.1| hypothetical protein bthur0007_35590 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228812283|gb|EEM58613.1| hypothetical protein bthur0007_35590 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 211
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 148 HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGK 207
+R ++ IN ++ +V+++ P + K E + ++I + + L + +C
Sbjct: 48 PYYMRLLQRLIN-NLKINVSINNPYQFKTKGEMIQECRNI---EFLKENLNYTMSCSHPD 103
Query: 208 RD--KRYEWGYGCNSCPACYLRQ----KGWMEFKEKYQD 240
+ C C C +R+ K +E +Y+D
Sbjct: 104 QGRMDGETETLHCGYCLPCVIRRASILKAEIEDGSRYRD 142
>gi|188586399|ref|YP_001917944.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|205816905|sp|B2A5K1|MNMA_NATTJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|179351086|gb|ACB85356.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 368
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ + L+ SGG DSS ++ V R + E V K L
Sbjct: 1 MMMSNRVLVAMSGGVDSSVAALMLKEQGYEVIGAHMRIWYREEDEELYEQNV-KGCCSLA 59
Query: 65 PKWKDSLGEDHI 76
D I
Sbjct: 60 AVHDAKRVADKI 71
>gi|167854751|ref|ZP_02477530.1| thiamine biosynthesis protein ThiI [Haemophilus parasuis 29755]
gi|167854165|gb|EDS25400.1| thiamine biosynthesis protein ThiI [Haemophilus parasuis 29755]
Length = 483
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G + K +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHGIGVKQMAY 225
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 226 -HIWSRYSSSHKVRFVAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKTSDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|259415755|ref|ZP_05739675.1| GMP synthase [Silicibacter sp. TrichCH4B]
gi|259347194|gb|EEW58971.1| GMP synthase [Silicibacter sp. TrichCH4B]
Length = 520
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 34/202 (16%)
Query: 1 MNDIIKKA---PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
M D I++ + SGG DSS + + D++ + D+G R
Sbjct: 212 MVDTIREQVGDKKVICALSGGVDSSVAAALIHEAIGDQLTCVFVDHG-------LLRKNE 264
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+++V + + LG++ S + I +F+
Sbjct: 265 AEEVVGMFRDHMNLQVIHADETELFLGELEGQSDPETKRKIIGK-------------LFI 311
Query: 117 VFAATLAYRL-GITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVH 169
A ++ G + G D +SG P TI++ L + + +
Sbjct: 312 DVFQKYADQIEGAEFLAQGTLYPDVIESVSFSGGP---SVTIKSHHNVGGLPEKMGLKLV 368
Query: 170 TPLMWLKKYETWKLAQDIGGQD 191
PL L K E L +++G D
Sbjct: 369 EPLRELFKDEVRALGRELGLPD 390
>gi|55958408|emb|CAI16158.1| argininosuccinate synthetase 1 [Homo sapiens]
Length = 198
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|192065|gb|AAB60706.1| argininosuccinate synthetase [Mus musculus]
Length = 199
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|56478329|ref|YP_159918.1| argininosuccinate synthase [Aromatoleum aromaticum EbN1]
gi|61211396|sp|Q5P0Z7|ASSY_AZOSE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|56314372|emb|CAI09017.1| Argininosuccinate synthase [Aromatoleum aromaticum EbN1]
Length = 409
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+L +SGG D+S L W D + V T + D GQ ++E R K ++
Sbjct: 1 MSDVKKAVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELE-PARQKALKFGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 DNIFIDDLREEFVRD 74
>gi|317472707|ref|ZP_07932022.1| tRNA methyl transferase [Anaerostipes sp. 3_2_56FAA]
gi|316899884|gb|EFV21883.1| tRNA methyl transferase [Anaerostipes sp. 3_2_56FAA]
Length = 301
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKEKVVVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|291613490|ref|YP_003523647.1| argininosuccinate synthase [Sideroxydans lithotrophicus ES-1]
gi|291583602|gb|ADE11260.1| argininosuccinate synthase [Sideroxydans lithotrophicus ES-1]
Length = 408
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + A+L +SGG D+S L W D + V T + D GQ ++E R K ++
Sbjct: 1 MSEIKKAVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELE-PARQKALKFGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 ENIFIDDLREEFVRD 74
>gi|261367083|ref|ZP_05979966.1| GMP synthase [Subdoligranulum variabile DSM 15176]
gi|282571204|gb|EFB76739.1| GMP synthase [Subdoligranulum variabile DSM 15176]
Length = 514
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 10 SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYG--QRNKVELECRL 54
L SGG DSS C + A ++ + D+G ++++ E C +
Sbjct: 217 KVLCALSGGVDSSVCAAMLAKAIGKQLTCVFVDHGLLRKHEREQVCEV 264
>gi|322370407|ref|ZP_08044966.1| thiamine biosynthesis protein ThiI [Haladaptatus paucihalophilus
DX253]
gi|320550115|gb|EFW91770.1| thiamine biosynthesis protein ThiI [Haladaptatus paucihalophilus
DX253]
Length = 389
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 36/182 (19%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMPKWK 68
+ L SGG DS + R V + DYG ++ R + + +L
Sbjct: 185 VSLVSGGIDSPVATWEVMKRGSPVIPVYLDLGDYGG-----IDHRARAVETVRKLAKYAP 239
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ +P + + P R ++F F +A +
Sbjct: 240 EQDMRVRKVPAGEAMTLLGEEVG-----------------PARMLVFRRFMYRVAEHIAR 282
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINL---GMESHVTVHTPLMWLKKYETWKLAQ 185
G+ + G ++ +TA NL G + + +H PL+ + K + A+
Sbjct: 283 EESAHGIVTGEAIG--------QKSSQTARNLGVVGTATTMPIHRPLLTMDKSDIVARAR 334
Query: 186 DI 187
I
Sbjct: 335 RI 336
>gi|260583058|ref|ZP_05850840.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
influenzae NT127]
gi|260093909|gb|EEW77815.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
influenzae NT127]
Length = 485
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-TAHEIGVKQMAYH----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 227 --IWQRYSSSHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|86142174|ref|ZP_01060684.1| argininosuccinate synthase [Leeuwenhoekiella blandensis MED217]
gi|85830926|gb|EAQ49383.1| argininosuccinate synthase [Leeuwenhoekiella blandensis MED217]
Length = 395
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 42/201 (20%)
Query: 9 PSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S C + ++ V +S + G + E++ KI K
Sbjct: 2 KKLVLAYSGGLDTSYCAKYLSEEKGFEVHAVSINTGGFTQEEIDEIESKALKIGAKTYKN 61
Query: 68 KDSLGE--DHILPLAILGDISHSSL---TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ D ++ I G++ ++ + + IQ + N
Sbjct: 62 VQAVDRFYDKVVKYLIFGNVLKNNTYPLSVSAERIIQAVEIIN----------------Y 105
Query: 123 AYRLGITNIVIGVCET--DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A +G + G D + I + + + TP+ L
Sbjct: 106 AKSIGAEYVAHGSTGAGNDQVRF------------DMIFQTLAPEIEIITPIRDL----- 148
Query: 181 WKLAQDIGGQDLVNLILEESH 201
KL++ L + +E S
Sbjct: 149 -KLSRQEEIDYLKSHGVEMSW 168
>gi|167747074|ref|ZP_02419201.1| hypothetical protein ANACAC_01786 [Anaerostipes caccae DSM 14662]
gi|317471889|ref|ZP_07931224.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerostipes
sp. 3_2_56FAA]
gi|167654034|gb|EDR98163.1| hypothetical protein ANACAC_01786 [Anaerostipes caccae DSM 14662]
gi|316900662|gb|EFV22641.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerostipes
sp. 3_2_56FAA]
Length = 392
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 57/199 (28%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R R++ F + +K +
Sbjct: 175 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVRIDATYF-----HAPPYTSERAKQKVVDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ K+ + + I I + + ++ + A
Sbjct: 230 KIVSKYAGPIHLHVVNFTDIQLAIYEKCPHDQLTIIMRRY-------------MMKIAEH 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A ++ G + + I H+ V PL+ + K E
Sbjct: 277 FAQENDALALITGESIGQVAS---------QTIHNLAITNDVCHMPVFRPLIGMDKQEIV 327
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ I + E+
Sbjct: 328 NIAERIDTFETSIQPFEDC 346
>gi|154149314|ref|YP_001407132.1| thiamine biosynthesis protein:ExsB [Campylobacter hominis ATCC
BAA-381]
gi|153805323|gb|ABS52330.1| thiamine biosynthesis protein:ExsB [Campylobacter hominis ATCC
BAA-381]
Length = 327
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 14/34 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS D V L D G
Sbjct: 2 KALALFSGGLDSMLAAKIISDMGVEVTALHIDIG 35
>gi|153953713|ref|YP_001394478.1| tRNA-specific 2-thiouridylase MnmA [Clostridium kluyveri DSM 555]
gi|219854333|ref|YP_002471455.1| hypothetical protein CKR_0990 [Clostridium kluyveri NBRC 12016]
gi|205813712|sp|A5N749|MNMA_CLOK5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|146346594|gb|EDK33130.1| TrmU [Clostridium kluyveri DSM 555]
gi|219568057|dbj|BAH06041.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 356
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 30/105 (28%), Gaps = 13/105 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF------DYGQRNKVELECRLCVRKKI 60
A ++ SGG DSS ++ V ++ DY E C
Sbjct: 1 MAKKVVVGMSGGVDSSVAAHLLKEQGYEVIGVTMQVWQEDDY-----YEDMESGCCSLSA 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
VE L H + + ++ + + PN
Sbjct: 56 VEDAKMVAYHLNIPHYVM--NFKEAFKKNVIDYFIQEYMEGKTPN 98
>gi|84995316|ref|XP_952380.1| trna methyl transferase [Theileria annulata strain Ankara]
gi|65302541|emb|CAI74648.1| trna methyl transferase, putative [Theileria annulata]
Length = 1070
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 14/39 (35%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
M + +L SGG DSS L R V+
Sbjct: 289 MFQSPRSKKRVAVLVSGGVDSSLALWIMKSRGFDVQAFH 327
>gi|29377398|ref|NP_816552.1| thiazole biosynthesis protein ThiI [Enterococcus faecalis V583]
gi|44888453|sp|Q82ZW3|THII_ENTFA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|29344865|gb|AAO82622.1| thiazole biosynthesis protein ThiI [Enterococcus faecalis V583]
Length = 404
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
L+ SGG DS A+ R VE + F +K +L K +G
Sbjct: 182 LMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYVG 235
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + + + + + + L + R + L + I+
Sbjct: 236 TIQFIEVPF------TEIQEEIKRVVPQGYLMT--ITRR--LMLRLTDAIREMRKGLVII 285
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G + + +++ + + + + P++ + K E ++A+ I +L
Sbjct: 286 NGESLAQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFEL 336
Query: 193 VNLILEES 200
E+
Sbjct: 337 AIQPFEDC 344
>gi|288799734|ref|ZP_06405193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prevotella sp. oral taxon 299 str. F0039]
gi|288332982|gb|EFC71461.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prevotella sp. oral taxon 299 str. F0039]
Length = 357
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
MN+ ++ A +L SGG DSS L + + + + G + E +C
Sbjct: 1 MNENLQDKKIA-VLLSGGVDSSVVLYELVQQGLKPDCFYIKIGPEQEEEWDC 51
>gi|119186717|ref|XP_001243965.1| hypothetical protein CIMG_03406 [Coccidioides immitis RS]
Length = 421
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ LL +SGG D+S L+W +++ V D GQ + E + KK+V
Sbjct: 1 MANKEKVLLAYSGGLDTSCILAWLIEQGHEVVCFLADVGQAEDFKEAERKALAVGAKKLV 60
>gi|322805504|emb|CBZ03068.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum H04402 065]
Length = 356
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS ++ V ++
Sbjct: 1 MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|237794471|ref|YP_002862023.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum Ba4 str. 657]
gi|229260617|gb|ACQ51650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum Ba4 str. 657]
Length = 356
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS ++ V ++
Sbjct: 1 MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|170760751|ref|YP_001786568.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A3 str.
Loch Maree]
gi|205810328|sp|B1KZE1|MNMA1_CLOBM RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|169407740|gb|ACA56151.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A3 str. Loch Maree]
Length = 356
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS ++ V ++
Sbjct: 1 MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|170755439|ref|YP_001780808.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum B1 str.
Okra]
gi|205810574|sp|B1IIY2|MNMA2_CLOBK RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|169120651|gb|ACA44487.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum B1 str. Okra]
Length = 356
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS ++ V ++
Sbjct: 1 MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|168183036|ref|ZP_02617700.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum Bf]
gi|182673881|gb|EDT85842.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum Bf]
Length = 356
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS ++ V ++
Sbjct: 1 MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|168178604|ref|ZP_02613268.1| tRNA -methyltransferase [Clostridium botulinum NCTC 2916]
gi|226948452|ref|YP_002803543.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A2 str.
Kyoto]
gi|182670342|gb|EDT82316.1| tRNA -methyltransferase [Clostridium botulinum NCTC 2916]
gi|226842334|gb|ACO85000.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A2 str. Kyoto]
Length = 356
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS ++ V ++
Sbjct: 1 MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|153938615|ref|YP_001390533.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum F str.
Langeland]
gi|205810312|sp|A7GCM3|MNMA1_CLOBL RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|152934511|gb|ABS40009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum F str. Langeland]
gi|295318614|gb|ADF98991.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum F str. 230613]
Length = 356
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS ++ V ++
Sbjct: 1 MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|147900590|ref|NP_001080795.1| argininosuccinate synthase [Xenopus laevis]
gi|82209710|sp|Q7ZWM4|ASSY_XENLA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|28422224|gb|AAH46941.1| Ass-prov protein [Xenopus laevis]
Length = 411
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ ++ ++L +SGG D+S L W ++ V + GQ E + V
Sbjct: 1 MSQSKGTVVLAYSGGLDTSCILVWLKEQGFDVIAYLANIGQNEDFEEARKKAV 53
>gi|241999384|ref|XP_002434335.1| GMP synthase, putative [Ixodes scapularis]
gi|215497665|gb|EEC07159.1| GMP synthase, putative [Ixodes scapularis]
Length = 696
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + R D+V L D G
Sbjct: 239 NSKVLMLVSGGVDSTVCAALLHKALREDQVIALHIDNG 276
>gi|213609353|ref|ZP_03369179.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 300
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 29/182 (15%)
Query: 16 SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV--ELMPKWKDSLGE 73
SGG DSS + R RV F+ G +I ++ + G
Sbjct: 3 SGGFDSSVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVRQVAHYLWNRFGS 51
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
H + I+ + + K+ D + V R + + A+ +A R G+ +V
Sbjct: 52 SHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASKVAERYGVQALVT 104
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
G S + + + S + PL+ K LA+ IG +D
Sbjct: 105 GEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFA 155
Query: 194 NL 195
Sbjct: 156 RT 157
>gi|260790337|ref|XP_002590199.1| hypothetical protein BRAFLDRAFT_283497 [Branchiostoma floridae]
gi|229275389|gb|EEN46210.1| hypothetical protein BRAFLDRAFT_283497 [Branchiostoma floridae]
Length = 688
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + D+V + D G
Sbjct: 231 KHKVLVLVSGGVDSAVCAALLHKALDKDQVIAVHIDNG 268
>gi|257059463|ref|YP_003137351.1| PP-loop domain protein [Cyanothece sp. PCC 8802]
gi|256589629|gb|ACV00516.1| PP-loop domain protein [Cyanothece sp. PCC 8802]
Length = 274
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 60/188 (31%), Gaps = 35/188 (18%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + AL+ +SGG DS+ A D DR ++ ELE I
Sbjct: 12 LFSQMEQALIAYSGGIDSTLVAKIAYDVLGDRALAITAVSPSLLPEELEEAKIQAATIG- 70
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
K L E H + + + L +T P L
Sbjct: 71 ----IKHELIETHEMDNPNYTSNPVN------RCYFCKSELHDTLKP------------L 108
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + G IV GV D Y R I+ A G S + + L K E +
Sbjct: 109 ALKRGYAYIVDGVNADDLQDY---RPG----IQAAKERGARSPLA----EVGLTKTEIRQ 157
Query: 183 LAQDIGGQ 190
L+Q +G
Sbjct: 158 LSQQLGLP 165
>gi|150399298|ref|YP_001323065.1| thiamine biosynthesis protein [Methanococcus vannielii SB]
gi|150012001|gb|ABR54453.1| thiamine biosynthesis protein [Methanococcus vannielii SB]
Length = 299
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVE-TLSF 40
+++ SGG+DS+ L+ A V + F
Sbjct: 38 NEKIVVMLSGGKDSAVSLAIAKSLGLNVHLCVHF 71
>gi|255262865|ref|ZP_05342207.1| tRNA(Ile)-lysidine synthase [Thalassiobium sp. R2A62]
gi|255105200|gb|EET47874.1| tRNA(Ile)-lysidine synthase [Thalassiobium sp. R2A62]
Length = 422
Score = 42.5 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 14/80 (17%)
Query: 2 NDIIKKAPSALLLFSGGQDSST----CLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
N+ ++ P + + SGG DS+ C+ WA V ++ D+GQR +
Sbjct: 24 NNELRSGPVGVAV-SGGSDSTALLLACVEWAKSNGVAVHAVTVDHGQRVE---------A 73
Query: 58 KKIVELMPKWKDSLGEDHIL 77
K+ + + LG +H +
Sbjct: 74 KQEAIAVSELTAELGVEHSI 93
>gi|206901317|ref|YP_002250407.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dictyoglomus thermophilum H-6-12]
gi|206740420|gb|ACI19478.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dictyoglomus thermophilum H-6-12]
Length = 345
Score = 42.5 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 35/122 (28%), Gaps = 19/122 (15%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSST V L+ + + + +KI + + +
Sbjct: 9 MSGGVDSSTTAYLLKKEGYEVIGLTMN------IAYSDSIKDAEKIAKYLNIPHFYVDLR 62
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPN--TFVPGRNIIFLVFAATLAYRLGITNIV 132
I+ S + PN TF R II A LG +
Sbjct: 63 KEFEEQIIKYFIDS---------YKSGYTPNPCTFC-NR-IIKFGLLLKKAQELGAEYLA 111
Query: 133 IG 134
G
Sbjct: 112 TG 113
>gi|58332120|ref|NP_001011212.1| argininosuccinate synthase [Xenopus (Silurana) tropicalis]
gi|82195682|sp|Q5M8Z6|ASSY_XENTR RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|56556265|gb|AAH87767.1| arginosuccinate synthetase [Xenopus (Silurana) tropicalis]
Length = 412
Score = 42.5 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ ++ ++L +SGG D+S L W ++ V + GQ E + V
Sbjct: 1 MSQSKGMVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQNEDFEAARKKAV 53
>gi|146277942|ref|YP_001168101.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides ATCC
17025]
gi|205817026|sp|A4WTT2|MNMA_RHOS5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|145556183|gb|ABP70796.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacter sphaeroides ATCC 17025]
Length = 378
Score = 42.5 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 12/108 (11%)
Query: 7 KAPSA---LLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVE 62
K PSA ++ SGG DSS + V ++ Y + + C + I +
Sbjct: 13 KPPSATRVVVAMSGGVDSSVVAAELAADGYDVVGVTLQLYDHGAALAKKGACCAGRDIHD 72
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
+ ++L ++ + V + D L T VP
Sbjct: 73 ARRVAETMGFPHYVLDY-------ENTFREAVIDEFADAYLAGATPVP 113
>gi|317474596|ref|ZP_07933870.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
gi|316909277|gb|EFV30957.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
Length = 357
Score = 42.5 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG--QRNKVELECRLCVRKKIV 61
+K LL SGG DSS D V ++F Y R + + R + +
Sbjct: 8 MKSKERVLLGMSGGTDSSVAAMRLQDAGYEVTGVTFRFYEVDGRTEYLDDARALAARLGI 67
Query: 62 ELMPKWKDSLGEDHIL 77
E + L + I+
Sbjct: 68 EHVTYDARELFRERII 83
>gi|304436306|ref|ZP_07396284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370711|gb|EFM24358.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 361
Score = 42.5 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
+ ++ SGG DSS + ++ V ++ + + +L+ R C V+
Sbjct: 2 EKQRVVVAMSGGVDSSVTAALLQEQGYEVVGVTMRLSEEARDADLDGRSCCSLSSVDDAR 61
Query: 66 KWKDSLGEDH 75
+ D LG H
Sbjct: 62 RVADILGIPH 71
>gi|58039815|ref|YP_191779.1| tRNA-specific 2-thiouridylase MnmA [Gluconobacter oxydans 621H]
gi|58002229|gb|AAW61123.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Gluconobacter oxydans 621H]
Length = 355
Score = 42.5 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 9/123 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
SGG DSS + + V + +D+GQ K C + I++
Sbjct: 1 MSGGVDSSVVAALLKRQGHEVIGATLQLYDHGQAAKP---GACCAGRDIMDARAVADRLG 57
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+++ S+ ++ A P V + +A LG +
Sbjct: 58 FPHYVID---AESRFRDSVVESFADAYARGETPVPCVACNQGVKFTDLLGMARDLGCEAM 114
Query: 132 VIG 134
G
Sbjct: 115 ATG 117
>gi|331082285|ref|ZP_08331411.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400771|gb|EGG80372.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
6_1_63FAA]
Length = 361
Score = 42.5 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 15/45 (33%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR 53
++ SGG DSS + V ++ Q E +
Sbjct: 4 KKVVVGLSGGVDSSVAAYLLKKQGYDVIGVTMQIWQEEDNEFQEE 48
>gi|307213208|gb|EFN88703.1| GMP synthase [glutamine-hydrolyzing] [Harpegnathos saltator]
Length = 718
Score = 42.5 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYG 43
LLL SGG DS+ C + ++V L + G
Sbjct: 240 NKKVLLLVSGGVDSTVCAALLHKALSKEQVIALHINNG 277
>gi|303256580|ref|ZP_07342594.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderiales bacterium 1_1_47]
gi|302860071|gb|EFL83148.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderiales bacterium 1_1_47]
Length = 378
Score = 42.5 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DS+ + V L
Sbjct: 19 ETKTVVVGLSGGVDSAVSAYLLKKQGYEVIGL 50
>gi|262306105|gb|ACY45645.1| gln amidotransferase [Skogsbergia lerneri]
Length = 197
Score = 42.5 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELE------CRLCVRKK 59
L+L SGG DS+ C + R D+V + + G K E R+ V+ K
Sbjct: 43 NNKVLMLVSGGVDSTVCAALLQKALRSDQVIAVHINNGFMRKGETSQVEQSLVRVGVKLK 102
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFV 108
+V + D I P ++L + V+ + + + +TFV
Sbjct: 103 VVHAAHDFYDGSTSIPIDPKDPNSRKRITNLLCQTVSPEDKRKIIGDTFV 152
>gi|167745698|ref|ZP_02417825.1| hypothetical protein ANACAC_00390 [Anaerostipes caccae DSM 14662]
gi|167655010|gb|EDR99139.1| hypothetical protein ANACAC_00390 [Anaerostipes caccae DSM 14662]
Length = 356
Score = 42.5 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKEKVVVGMSGGVDSSVAAYLLKEQGYEVIGVT 33
>gi|294677198|ref|YP_003577813.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacter capsulatus SB 1003]
gi|294476018|gb|ADE85406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacter capsulatus SB 1003]
Length = 354
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 9/97 (9%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS + + V ++ Y + + C + I + +
Sbjct: 1 MSGGVDSSVVAAMLKEEGYDVIGVTLQLYDHGAALAKKGACCAGQDIHDARRVAEAMNFP 60
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
++L ++ + V + D L T VP
Sbjct: 61 HYVLDY-------ENTFREAVIEEFADAYLAGATPVP 90
>gi|229846706|ref|ZP_04466813.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 7P49H1]
gi|229810195|gb|EEP45914.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 7P49H1]
Length = 485
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + + I + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSASHKVRFITINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|254509031|ref|ZP_05121136.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
parahaemolyticus 16]
gi|219548066|gb|EED25086.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
parahaemolyticus 16]
Length = 482
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 SKFKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|254462137|ref|ZP_05075553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacterales bacterium HTCC2083]
gi|206678726|gb|EDZ43213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodobacteraceae bacterium HTCC2083]
Length = 381
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + + C I + +
Sbjct: 22 RVVVAMSGGVDSSVVAAQLASEGYDVVGVTLQLYDHGAALAKKGACCAGLDIHDARRVAE 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ ++L ++ ++ A P VP
Sbjct: 82 EMGFPHYVLD---YENVFKDAVIDEFADSYLAGATP---VP 116
>gi|68250032|ref|YP_249144.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae
86-028NP]
gi|145632794|ref|ZP_01788527.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 3655]
gi|145634986|ref|ZP_01790693.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittAA]
gi|81335544|sp|Q4QKG3|THII_HAEI8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|68058231|gb|AAX88484.1| predicted thiamine biosynthesis ATP pyrophosphatase [Haemophilus
influenzae 86-028NP]
gi|144986450|gb|EDJ93016.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 3655]
gi|145267852|gb|EDK07849.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittAA]
Length = 485
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + + I + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSASHKVRFITINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|293392562|ref|ZP_06636882.1| thiamine biosynthesis protein ThiI [Serratia odorifera DSM 4582]
gi|291424964|gb|EFE98173.1| thiamine biosynthesis protein ThiI [Serratia odorifera DSM 4582]
Length = 482
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 25/179 (13%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS + R RV F+ G K++ + S +
Sbjct: 183 LISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHYLWNRFGSSHK 236
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ + + + K+ D + V R + + A+ +A R G+ +V
Sbjct: 237 VRFVAIDFEPVVG------EILEKVDDGQMG--VVLKR--MMVRAASKVAERYGVQALVT 286
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
G S + + + S + PL+ K +A+ IG +D
Sbjct: 287 GEALGQVSS---------QTLTNLRLIDNASDTLILRPLISHDKEHIINVARQIGTEDF 336
>gi|262306087|gb|ACY45636.1| gln amidotransferase [Periplaneta americana]
Length = 197
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG-------QRNKVELECRLCVRK 58
+ L+L SGG DS+ C + R D+V + D G QR + LE +L +R
Sbjct: 43 SNKVLMLVSGGVDSTVCAALLHKALREDQVIAVHIDNGFMRKNESQRVEQSLE-KLGLRL 101
Query: 59 KIVELMPKWKDS 70
K++ ++
Sbjct: 102 KVINASHQFLHG 113
>gi|255994055|ref|ZP_05427190.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium saphenum ATCC 49989]
gi|255993723|gb|EEU03812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium saphenum ATCC 49989]
Length = 348
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 46/140 (32%), Gaps = 28/140 (20%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ + K A+ FSGG DS+ ++ V + Y R+ + I
Sbjct: 1 MDRLGDKTKVAVG-FSGGVDSTAACLLLKEKGYDVHPV---Y---------LRMGEAEDI 47
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNII 114
EL D E +L L D ++S+ N + P N V R +
Sbjct: 48 SELKKIANDIGLELKVLDLT---DRFNNSVVDNFKKAYMNGMTPNPCIVCNPLVKFR-GL 103
Query: 115 FLVFAATLAYRLGITNIVIG 134
A GI I G
Sbjct: 104 M-----DFADDNGIDLIATG 118
>gi|255321785|ref|ZP_05362940.1| thiamine biosynthesis protein:ExsB [Campylobacter showae RM3277]
gi|255301265|gb|EET80527.1| thiamine biosynthesis protein:ExsB [Campylobacter showae RM3277]
Length = 328
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL+LFSGG DS + + V + D G + + +R++ E ++K
Sbjct: 2 KALVLFSGGLDSMISIKLLTTQGIEVTAIHIDIG--FSGDEKKAEILRRRANEAGAEFK 58
>gi|224542883|ref|ZP_03683422.1| hypothetical protein CATMIT_02077 [Catenibacterium mitsuokai DSM
15897]
gi|224524213|gb|EEF93318.1| hypothetical protein CATMIT_02077 [Catenibacterium mitsuokai DSM
15897]
Length = 376
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+L SGG DS+ + V +
Sbjct: 2 KRVVLGLSGGVDSAVAAYLLKKQGYEVICV 31
>gi|257388353|ref|YP_003178126.1| thiamine biosynthesis protein [Halomicrobium mukohataei DSM 12286]
gi|257170660|gb|ACV48419.1| thiamine biosynthesis protein [Halomicrobium mukohataei DSM 12286]
Length = 395
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 52/207 (25%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---Y-GQRNKVELECRLCVRKK 59
+ ++L SGG DS L R V + D Y G ++ L +
Sbjct: 181 PVGTQEPVVVLLSGGIDSPVAAWKLLKRGCPVVPVYVDLGAYGGPDHRA---RALSTAET 237
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII----- 114
+ +P + L++ ++ + +A ++ R ++
Sbjct: 238 LASYVPN----------VDLSVRVADGG-AVVERLADELD----------ARRMLALRRF 276
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTI--RAIETAINLG---MESHVTVH 169
L A +A R + G + I ++ +T+ NL + V
Sbjct: 277 MLAVGARVAERTDAVGVATG--------------EAIGQKSSQTSANLAVTDVAVDCPVF 322
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLI 196
P + K + +LA++IG + +
Sbjct: 323 RPNLTADKADITQLAREIGTFEASTIP 349
>gi|213854880|ref|ZP_03383120.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 45
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 6/35 (17%)
Query: 202 TCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
TCY G G GC C AC LR G +
Sbjct: 1 TCYNG------FKGDGCGHCAACNLRANGLNHYLA 29
>gi|224371642|ref|YP_002605806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfobacterium autotrophicum HRM2]
gi|223694359|gb|ACN17642.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfobacterium autotrophicum HRM2]
Length = 365
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 41/133 (30%), Gaps = 18/133 (13%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D +P+A+ SGG DS + + + F G E E V+
Sbjct: 23 DPSVNSPTAIA-MSGGIDSLVAAHVLKRQGHDLVGIHFTTG----FESEA--------VD 69
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAAT 121
L + H + L+ + ++ PN V R I F A
Sbjct: 70 LSSIEDQLDIKIHQMDLS---AEFNRAVVDYFVKTYARGKTPNPCVVCNRTIKF-GVLAQ 125
Query: 122 LAYRLGITNIVIG 134
A LG I G
Sbjct: 126 RAKTLGAEKIATG 138
>gi|50304843|ref|XP_452377.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641510|emb|CAH01228.1| KLLA0C04037p [Kluyveromyces lactis]
Length = 420
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W L++ V + GQ + + E I
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVVAFMANVGQ--EEDFEAAEKKALLIGA 55
>gi|18976645|ref|NP_578002.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
DSM 3638]
gi|18892216|gb|AAL80397.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
3638]
Length = 283
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 62/206 (30%), Gaps = 43/206 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-ECRLCVRKKIV 61
+ K L+ SGG+DS+ ++E L + G E E KK
Sbjct: 24 KLASKDERILVAVSGGKDSAVTAYVLKKLGYKIECLHLNLG---IGEYSEKSEIYAKKQC 80
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E + + + +L +G++ S T + + + N F
Sbjct: 81 EFIGAPLNIIRVKELLGYG-IGEVRTSRPTCSY-CGLTKRYIMNKF-------------- 124
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-------------SHVTV 168
AY G + G D + + + ++ E V
Sbjct: 125 -AYDNGFDAVATGHNLDDEASF---------LMNNLLHWNTEYLAKGGPLLPGEGKFVKK 174
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVN 194
PL L + E A +G + +V
Sbjct: 175 IKPLYELTEREVVAYAIAVGLEYIVE 200
>gi|83859630|ref|ZP_00953150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanicaulis alexandrii HTCC2633]
gi|83851989|gb|EAP89843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanicaulis alexandrii HTCC2633]
Length = 433
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 61/188 (32%), Gaps = 15/188 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DSS + +V ++ Y V + C + I + +
Sbjct: 76 RVVAAMSGGVDSSVVAAVLHRAGYQVVGMTLQLYDHGEAVHRKGACCAGQDIHDARRVAE 135
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ ++ A P V + + +LG
Sbjct: 136 AMGFAHYVLDYET---RFREAVIEDFADTYLAGFTPIPCVRCNQSVKFADLLATSKQLGA 192
Query: 129 TNIVIG-VCETDYSGYPDCRHDTIRAIETA------INLGMESHVT-VHTPLMWLKKYET 180
+V G + SG R + RA + + E + + PL L K +T
Sbjct: 193 DCLVTGHYIQRTMSG---NRPELRRAADAGKDQSYFLFATTEEQLDYLRFPLGHLNKEQT 249
Query: 181 WKLAQDIG 188
+LA +G
Sbjct: 250 RELAAALG 257
>gi|329123447|ref|ZP_08252011.1| thiamine biosynthesis protein ThiI [Haemophilus aegyptius ATCC
11116]
gi|327471029|gb|EGF16484.1| thiamine biosynthesis protein ThiI [Haemophilus aegyptius ATCC
11116]
Length = 485
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-TVHEIGVKQMAYH----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 227 --IWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|319776300|ref|YP_004138788.1| thiamine biosynthesis ATP pyrophosphatase [Haemophilus influenzae
F3047]
gi|317450891|emb|CBY87116.1| predicted thiamine biosynthesis ATP pyrophosphatase [Haemophilus
influenzae F3047]
Length = 485
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-TVHEIGVKQMAYH----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 227 --IWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|319897069|ref|YP_004135264.1| thiamine biosynthesis ATP pyrophosphatase [Haemophilus influenzae
F3031]
gi|317432573|emb|CBY80933.1| predicted thiamine biosynthesis ATP pyrophosphatase [Haemophilus
influenzae F3031]
Length = 485
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-TVHEIGVKQMAYH----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 227 --IWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|260588149|ref|ZP_05854062.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Blautia hansenii DSM 20583]
gi|260541676|gb|EEX22245.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Blautia hansenii DSM 20583]
Length = 361
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 15/45 (33%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR 53
++ SGG DSS + V ++ Q E +
Sbjct: 4 KKVVVGLSGGVDSSVAAYLLKKQGYDVIGVTMQIWQEEDNEFQEE 48
>gi|145629451|ref|ZP_01785249.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 22.1-21]
gi|144978294|gb|EDJ88058.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 22.1-21]
Length = 485
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-TVHEIGVKQMAYH----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 227 --IWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|255524816|ref|ZP_05391766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium carboxidivorans P7]
gi|296188647|ref|ZP_06857035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium carboxidivorans P7]
gi|255511483|gb|EET87773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium carboxidivorans P7]
gi|296046911|gb|EFG86357.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium carboxidivorans P7]
Length = 358
Score = 42.5 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 35/128 (27%), Gaps = 1/128 (0%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DSS + V ++ Q E E + +
Sbjct: 1 MNKKVVIGMSGGVDSSVAAYLLKQQGYDVIGVTMQVWQ-EDEEYEAVEGGCCSLSAVEDA 59
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + D + DI ++ + PN V I A L
Sbjct: 60 RRVAYKLDIPFYVMNFKDIFKKNVIDYFIDEYMQGRTPNPCVACNKFIKFDALLKKAMEL 119
Query: 127 GITNIVIG 134
G + G
Sbjct: 120 GADYVATG 127
>gi|242399762|ref|YP_002995187.1| ATP-binding protein [Thermococcus sibiricus MM 739]
gi|242266156|gb|ACS90838.1| ATP-binding protein [Thermococcus sibiricus MM 739]
Length = 229
Score = 42.5 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRV 35
+ K A +LFSGG+DS+ L WAL + V
Sbjct: 1 MIKMRVA-VLFSGGKDSTYALYWALKKGFEV 30
>gi|117620212|ref|YP_856231.1| thiamine biosynthesis protein ThiI [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|189030614|sp|A0KIY0|THII_AERHH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|117561619|gb|ABK38567.1| thiamine biosynthesis/tRNA modification protein ThiI [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 482
Score = 42.5 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 59/194 (30%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIATQEDVLSLISGGFDSGVASFQFIKRGCRVHYCFFNLG-----------GAAHEIGVK 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + + + + KI + + V R + + AA
Sbjct: 222 QVAYHLWNRFGSSHRVR---FTAVDFEPVVAEILEKIDNGQMG--VVLKR--MMMRAAAK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A I +V G C S + + + + + PL+ K +
Sbjct: 275 VADEFQIPALVTGECVGQVSS---------QTLTNLNVIDRVTDKVILRPLITWDKPDII 325
Query: 182 KLAQDIGGQDLVNL 195
A+ IG +
Sbjct: 326 SEARRIGTLEFAET 339
>gi|45357636|ref|NP_987193.1| argininosuccinate synthase [Methanococcus maripaludis S2]
gi|47605395|sp|P61527|ASSY_METMP RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|45047196|emb|CAF29629.1| Argininosuccinate synthase [Methanococcus maripaludis S2]
Length = 397
Score = 42.5 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 34/196 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A+L +SGG D+S CL D++ +V +++ D GQ + +L+ KK
Sbjct: 2 QEKIAVLAYSGGLDTSCCLKLLEDKYDYKVISVAVDVGQ-PEDDLKEPEEKAKKF----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + + + + + + + P + R +I + A LA
Sbjct: 56 ----GVLKHYTIDAKE--EFAKDYIFRAIKANALYEGYPLSTALARPLIAIKIA-ELAQE 108
Query: 126 LGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL--MWLKKYE 179
+G + I G C E+ + + + P+ + L + E
Sbjct: 109 VGASAISHG-----------CTGKGNDQF--RFESVMRAKT-PEIEIVAPIRDLNLTRTE 154
Query: 180 TWKLAQDIGGQDLVNL 195
A++ G V+L
Sbjct: 155 EIAYAKEKGIPVPVDL 170
>gi|262306025|gb|ACY45605.1| gln amidotransferase [Cryptocellus centralis]
Length = 196
Score = 42.1 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG-QRNKVELECRLCVRK 58
+ L+L SGG DS+ C + + D+V + D G R L+ +R+
Sbjct: 43 SNKVLMLLSGGVDSTVCAALLHKALKEDQVIAVHIDNGFMRKNESLQVEQSLRR 96
>gi|78222093|ref|YP_383840.1| tRNA-specific 2-thiouridylase MnmA [Geobacter metallireducens
GS-15]
gi|123572471|sp|Q39XA9|MNMA_GEOMG RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|78193348|gb|ABB31115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter metallireducens GS-15]
Length = 368
Score = 42.1 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY 42
K ++ SGG DSS + + V +S DY
Sbjct: 4 KARKRIVVAMSGGVDSSVTAALLKEEGHEVIGISMQVWDY 43
>gi|99081216|ref|YP_613370.1| GMP synthase [Ruegeria sp. TM1040]
gi|123077651|sp|Q1GGV8|GUAA_SILST RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|99037496|gb|ABF64108.1| GMP synthase (glutamine-hydrolyzing) [Ruegeria sp. TM1040]
Length = 520
Score = 42.1 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 31/191 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ SGG DSS + + D++ + D+G R +++V +
Sbjct: 223 KKVICALSGGVDSSVAAALIHEAIGDQLTCVFVDHG-------LLRKNEAEEVVGMFRDH 275
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
+ LG++ S + I +F+ A ++
Sbjct: 276 MNLQVIHADETELFLGELEGQSDPETKRKIIGK-------------LFIDVFQKYADQIE 322
Query: 127 GITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
G + G D +SG P TI++ L + + + PL L K E
Sbjct: 323 GAEFLAQGTLYPDVIESVSFSGGP---SVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEV 379
Query: 181 WKLAQDIGGQD 191
L +++G D
Sbjct: 380 RALGRELGLPD 390
>gi|262306017|gb|ACY45601.1| gln amidotransferase [Semibalanus balanoides]
Length = 197
Score = 42.1 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVE 62
LLL SGG DS+ C + AL + D+V + D G ++++ L+ +RK ++
Sbjct: 43 THKVLLLVSGGVDSTVCAALLHKALSQ-DQVIAVHIDNGFMRKHES-LQVEQSLRKIGLK 100
Query: 63 LMPKWKDS-----------LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
L G + +L LG + ++ + I D +
Sbjct: 101 LRVINARHNFLNGSTTVPETGANGVLRKRALGLLCRTTHPEQKRKIIXDTFIKV 154
>gi|87118398|ref|ZP_01074297.1| argininosuccinate synthase [Marinomonas sp. MED121]
gi|86166032|gb|EAQ67298.1| argininosuccinate synthase [Marinomonas sp. MED121]
Length = 410
Score = 42.1 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W + + V T + D GQ +VE I E+
Sbjct: 1 MSDVKKVVLAYSGGLDTSVIVKWLQEEYQCEVVTFTADLGQGEEVEPARAKAQALGIKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIEDLREEFVRDFVFPMFRANTIYEGEYLLGTSIA 95
>gi|329767202|ref|ZP_08258729.1| tRNA-specific 2-thiouridylase mnmA [Gemella haemolysans M341]
gi|328836869|gb|EGF86516.1| tRNA-specific 2-thiouridylase mnmA [Gemella haemolysans M341]
Length = 370
Score = 42.1 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 19/137 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVEL 63
+ ++ SGG DSS + V + +N E + R +C+ +K E
Sbjct: 1 MNSNKKVVVGMSGGVDSSVTAYLLKQQGYDVIGVFM----KNWEEKDDRGVCLAEKDYED 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF------LV 117
+ K + L + + + T + + + PN P I
Sbjct: 57 VIKVCEQLDIPYY-SINFEKEYWDKVFTYFLD-EYKKGRTPN---PD---IMCNKEIKFK 108
Query: 118 FAATLAYRLGITNIVIG 134
A LG + G
Sbjct: 109 VFLEYAEDLGADYVATG 125
>gi|241889855|ref|ZP_04777153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Gemella haemolysans ATCC 10379]
gi|241863477|gb|EER67861.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Gemella haemolysans ATCC 10379]
Length = 370
Score = 42.1 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 19/137 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVEL 63
+ ++ SGG DSS + V + +N E + R +C+ +K E
Sbjct: 1 MNSNKKVVVGMSGGVDSSVTAYLLKQQGYDVIGVFM----KNWEEKDDRGVCLAEKDYED 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF------LV 117
+ K + L + + + T + + + PN P I
Sbjct: 57 VIKVCEQLDIPYY-SINFEKEYWDKVFTYFLD-EYKKGRTPN---PD---IMCNKEIKFK 108
Query: 118 FAATLAYRLGITNIVIG 134
A LG + G
Sbjct: 109 VFLEYAEDLGADYVATG 125
>gi|20090985|ref|NP_617060.1| argininosuccinate synthase [Methanosarcina acetivorans C2A]
gi|22095473|sp|Q8TNY5|ASSY_METAC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|19916071|gb|AAM05540.1| argininosuccinate synthase [Methanosarcina acetivorans C2A]
Length = 394
Score = 42.1 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIV--E 62
L +SGG D+S C+ ++ +D V T+S D GQ + E++ +KI
Sbjct: 1 MVKKVALAYSGGLDTSVCIPILKEKYGYDEVITISVDVGQ-PEEEIKKADAKAEKISNKH 59
Query: 63 LMPKWKDSLGEDHILPL 79
K+ +D+I PL
Sbjct: 60 YTIDAKEEFVKDYIFPL 76
>gi|127513694|ref|YP_001094891.1| thiamine biosynthesis protein ThiI [Shewanella loihica PV-4]
gi|189030650|sp|A3QGN4|THII_SHELP RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|126638989|gb|ABO24632.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
loihica PV-4]
Length = 485
Score = 42.1 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 71/198 (35%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVE 62
+ L L SGG DS + R R F+ G ++++ + +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSFQFIKRGSRTHYCFFNLGGDQHEI----------GVKQ 224
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ GE H + + + + + KI + + + R + + A+ +
Sbjct: 225 VAYHLWQKYGESHKVKFISVPF---DPVVQEILEKIDNGQMG--VILKR--MMMRAASRI 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++GI +V G S + + + + + + PL+ + K +
Sbjct: 278 AEKMGIQALVTGEAMGQVSS---------QTLTNLNVIDRSTDMLILRPLIVMDKQDIIN 328
Query: 183 LAQDIGGQDLVNLILEES 200
++++IG +D I E
Sbjct: 329 MSREIGTEDFAKSIPEYC 346
>gi|291549890|emb|CBL26152.1| thiazole biosynthesis/tRNA modification protein ThiI [Ruminococcus
torques L2-14]
Length = 396
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I SA+LL SGG DS R +E F + ++K+V+L
Sbjct: 176 PIGTNGSAMLLLSGGIDSPVAGYMVSKRGVELEATYF-----HAPPYTSE-RAKEKVVDL 229
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G + H++ + + + I + A
Sbjct: 230 ARLVSAYSGPIKLHVVNFTDIQLYIYEKCPHDELTIIMRRY------------MMKIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + G ++ G + + +++ + V+ PL+ K +
Sbjct: 278 FAKKDGCLGLITGESIGQVAS---------QTMQSLAATNAVCTLPVYRPLIGFDKKDIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ I + E+
Sbjct: 329 EISEKINTYETSIQPFEDC 347
>gi|262306075|gb|ACY45630.1| gln amidotransferase [Hexagenia limbata]
Length = 197
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
+ LLL SGG DS+ C + R D+V + D G
Sbjct: 43 SNKVLLLVSGGVDSTVCAALLHKALREDQVIAVHIDNG 80
>gi|255011782|ref|ZP_05283908.1| putative tRNA methyltransferase [Bacteroides fragilis 3_1_12]
Length = 364
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 29/140 (20%)
Query: 1 MNDIIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLC 55
MN + + L+ SGG DS+ TCL ++ + ++ D Q + EL R+
Sbjct: 1 MN-MKESNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAVRMG 57
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
+ + + +KD++ ++ I + + PN V N +F
Sbjct: 58 IEHYVADERVPFKDTIVKNFI-------------------DEYRQGRTPNPCVMC-NPLF 97
Query: 116 -LVFAATLAYRLGITNIVIG 134
A +LG I G
Sbjct: 98 KFRMLIEWADKLGCDWIATG 117
>gi|238918997|ref|YP_002932511.1| thiamine biosynthesis protein ThiI [Edwardsiella ictaluri 93-146]
gi|259518550|sp|C5BCI2|THII_EDWI9 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|238868566|gb|ACR68277.1| thiamine biosynthesis/tRNA modification protein ThiI, putative
[Edwardsiella ictaluri 93-146]
Length = 482
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 61/197 (30%), Gaps = 41/197 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K+ D + V R + + A+ +A
Sbjct: 227 LWNRFGSSHRVRFVAIDFAPVVG------EILEKVDDGQMG--VVLKR--MMVRAASRVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--------PLMWL 175
R GI +V G A+ + + + + PL+
Sbjct: 277 ERYGIQALVTG-----------------EALGQVSSQTLTNLRLIDGVSDTLVLRPLIAH 319
Query: 176 KKYETWKLAQDIGGQDL 192
K +LA++IG +D
Sbjct: 320 DKEHIIRLARNIGTEDF 336
>gi|331000512|ref|ZP_08324184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Parasutterella excrementihominis YIT 11859]
gi|329571476|gb|EGG53161.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Parasutterella excrementihominis YIT 11859]
Length = 388
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DS+ + V L
Sbjct: 29 ETKTVVVGLSGGVDSAVSAYLLKKQGYEVIGL 60
>gi|251792601|ref|YP_003007327.1| thiamine biosynthesis protein ThiI [Aggregatibacter aphrophilus
NJ8700]
gi|247533994|gb|ACS97240.1| thiamine biosynthesis/tRNA modification protein ThiI
[Aggregatibacter aphrophilus NJ8700]
Length = 482
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 61/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS L R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + +NV V R + + A+ +A
Sbjct: 225 YHIWQRYGSSHKVRFVAINFEGVVGEILENVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V V PL+ K + L
Sbjct: 277 QRFDIQAIVTGEALGQVSS---------QTLTNLRLIDEAAEVLVLRPLITHDKEQIIAL 327
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 328 AKHIGTDDI 336
>gi|212697288|ref|ZP_03305416.1| hypothetical protein ANHYDRO_01856 [Anaerococcus hydrogenalis DSM
7454]
gi|212675737|gb|EEB35344.1| hypothetical protein ANHYDRO_01856 [Anaerococcus hydrogenalis DSM
7454]
Length = 411
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+I+ +A +L +SGG D+S ++W + V +S D GQ E +K +
Sbjct: 7 EILNQAKKVVLAYSGGLDTSVMVTWLKENGAKEVICVSVDLGQVKNPE----ALEKKALK 62
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
K+ + ED + + + +NV
Sbjct: 63 SGASKFYNVNVEDEFIEDYAFKTLKAGAKYENV 95
>gi|301170225|emb|CBW29829.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Haemophilus influenzae 10810]
Length = 485
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMAYH 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + G + + K+ + + V R + + A+ +A
Sbjct: 227 IWQRYSSSHKVRFIAINFEGVVG------EILEKVDNGQMG--VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|262341081|ref|YP_003283936.1| bifunctional argininosuccinate synthase/acetyltransferase activity
of N-acetylglutamate synthase [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272418|gb|ACY40326.1| bifunctional argininosuccinate synthase/acetyltransferase activity
of N-acetylglutamate synthase [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 588
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N+ + +L +SGG D+S CL + + V T+ + G NK ELE I
Sbjct: 185 NNYLSPGDKIVLAYSGGLDTSYCLKYLIQEKYEVHTVIINTGGFNKDELEEIEDRAISIG 244
Query: 62 ELMPKWKDSLGE 73
K +++ E
Sbjct: 245 SKSHKTIEAIEE 256
>gi|229844086|ref|ZP_04464227.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 6P18H1]
gi|229813080|gb|EEP48768.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 6P18H1]
Length = 485
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWQRYSASHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A+DIG D+
Sbjct: 328 AKDIGTDDI 336
>gi|254449359|ref|ZP_05062802.1| thiamine biosynthesis/tRNA modification protein ThiI [gamma
proteobacterium HTCC5015]
gi|198261026|gb|EDY85328.1| thiamine biosynthesis/tRNA modification protein ThiI [gamma
proteobacterium HTCC5015]
Length = 481
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 31/192 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVE 62
+ +A+ L SGG DS+ + R + L F+ G ++V + E
Sbjct: 174 PLGSQAAAMSLMSGGFDSAVASYLTMSRGLKTHFLFFNLGGSDHEV----------GVKE 223
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ G H + + + + Q V R +FL A+ +
Sbjct: 224 VAYYLWQRYGSSHKVKFISVDFEPVVAEILDKVKNSQMG-----VVLKR--MFLRAASDI 276
Query: 123 AYRLGITNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + +V G + + P A+ + H+ + PL+ K +
Sbjct: 277 AKVHKVEALVTGEAIAQVSSQTLP----------NLAVIDEVTEHLVLR-PLITTHKKDI 325
Query: 181 WKLAQDIGGQDL 192
++A+ IG ++
Sbjct: 326 IRIARQIGTEEF 337
>gi|145630743|ref|ZP_01786521.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae R3021]
gi|144983625|gb|EDJ91085.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae R3021]
Length = 381
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMAYH 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + S + + + G + + K+ + + V R + + A+ +A
Sbjct: 227 IWQRYSSSHKVRFIAINFEGVVG------EILEKVDNGQMG--VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|332828874|gb|EGK01557.1| hypothetical protein HMPREF9455_02089 [Dysgonomonas gadei ATCC
BAA-286]
Length = 399
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 18/132 (13%)
Query: 7 KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L FSGG D+S C + D V T + G EL+ K+ +
Sbjct: 1 MKKKVVLAFSGGLDTSFCAKYLSADMGYDVYTAIANTGGFTPEELKVIEEKAYKLGAVKH 60
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + + I G++ + + + IF A
Sbjct: 61 VSLDITQEYYEKSIKYMIFGNVLRN---GTYPISVSSER-----------IFQAIAIINY 106
Query: 123 AYRLGITNIVIG 134
A +G + G
Sbjct: 107 AKEIGADAVAHG 118
>gi|312144347|ref|YP_003995793.1| thiamine biosynthesis/tRNA modification protein ThiI [Halanaerobium
sp. 'sapolanicus']
gi|311904998|gb|ADQ15439.1| thiamine biosynthesis/tRNA modification protein ThiI [Halanaerobium
sp. 'sapolanicus']
Length = 402
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K + LL+ SGG DS +AL R ++ + F + K+ V+
Sbjct: 187 PVKSSGQTLLMLSGGIDSPVAGWYALKRGLKIGAVYF-----HSPPYTSAR--AKEKVKD 239
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + G + L + +I + + K + T R + + A LA
Sbjct: 240 LARILSKYGGEIKLQIPYFTEI-----QQQIVKKCPEKY---TITIMRRM-MVRIANHLA 290
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ G + + +E + S + + PL+ K E +L
Sbjct: 291 KENSQKALITGESLGQVAS---------QTLEGIQSTDDASELPILRPLITSDKNEIIEL 341
Query: 184 AQDIGGQDLVNLILEES 200
A+ I ++ E+
Sbjct: 342 AKKIDSYEISIRPYEDC 358
>gi|262306109|gb|ACY45647.1| gln amidotransferase [Stenochrus portoricensis]
Length = 196
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
+ L+L SGG DS+ C + + D+V + + G
Sbjct: 43 SNKVLMLLSGGVDSTVCAALLHKALKEDQVIAIHINNG 80
>gi|308049705|ref|YP_003913271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ferrimonas balearica DSM 9799]
gi|307631895|gb|ADN76197.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ferrimonas balearica DSM 9799]
Length = 367
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 26/144 (18%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKK 59
M+D + ++ SGG DSS L + +VE L +N E + C +
Sbjct: 1 MSD--NRNKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFM----KNWEEDDTEEYCAASQ 54
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII----- 114
+ D LG + L ++ ++ + + P +I+
Sbjct: 55 DLADAQAVCDKLGIE-------LHSVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEI 107
Query: 115 ----FLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 108 KFKAFLEFA---AEALGADYIATG 128
>gi|268316165|ref|YP_003289884.1| thiamine biosynthesis/tRNA modification protein ThiI [Rhodothermus
marinus DSM 4252]
gi|262333699|gb|ACY47496.1| thiamine biosynthesis/tRNA modification protein ThiI [Rhodothermus
marinus DSM 4252]
Length = 500
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 33/194 (17%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN--KVELECRLCVRKKIVELMPKWK 68
AL+L SGG DS+ A+ R V+ L + G + + L+ +
Sbjct: 186 ALVLISGGFDSAVAAWLAMRRGVSVDYLFCNLGGKAYERAVLQVAKVLADAWSFGTRPRF 245
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYRL 126
S+ ++ +++ + P + V R + +A R
Sbjct: 246 YSVDFGPVVD------------------EMRRHVRPAYWQVVLKR--LMYRAGEAVARRT 285
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ G S T++ ++ AI G + V PL+ K E LA+
Sbjct: 286 EALALITGESLGQVSS------QTLKNLQ-AIEAGT--SLPVLRPLLTYDKEEIINLARK 336
Query: 187 IGGQDLVNLILEES 200
IG L + E
Sbjct: 337 IGTATLSERVREYC 350
>gi|58616948|ref|YP_196147.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia ruminantium str. Gardel]
gi|75432674|sp|Q5FFJ0|MNMA_EHRRG RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|58416560|emb|CAI27673.1| Probable tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia ruminantium str. Gardel]
Length = 370
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 21/190 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC------VRKKI 60
+ +A++ SGG DSS + +V ++ Y + C K++
Sbjct: 18 STTAVVAMSGGVDSSVAAALLHKLGYKVIGITLQLYNNNKNSNTKGACCGSLDTKDAKQV 77
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
M +L + + ++ D + + N + R+++
Sbjct: 78 ASSMGFPHYTLNYEKVFREEVIEDFIDTYTQGKTPIPCIKCNQ---VIKFRDLLNAT--- 131
Query: 121 TLAYRLGITNIVIGV----CETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWL 175
LG +V G E D Y DT + + + + PL
Sbjct: 132 ---KSLGADVLVTGHYIRKIEQDDDIYVYSSKDTKKDQSYFLFATTVEQLRLLRFPLGNF 188
Query: 176 KKYETWKLAQ 185
K + KLA+
Sbjct: 189 HKEDIRKLAK 198
>gi|261493743|ref|ZP_05990260.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261496157|ref|ZP_05992564.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261308189|gb|EEY09485.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261310588|gb|EEY11774.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 483
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 58/189 (30%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFIAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASRIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 328 AKAIGTDDI 336
>gi|228967746|ref|ZP_04128763.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228791968|gb|EEM39553.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 234
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++L SGG DS + R VE + F
Sbjct: 179 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHF 209
>gi|254456653|ref|ZP_05070082.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Pelagibacter sp. HTCC7211]
gi|207083655|gb|EDZ61081.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Pelagibacter sp. HTCC7211]
Length = 372
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 4 IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKI 60
I KK + ++ SGG DSST + +V ++ Y +V + C + I
Sbjct: 10 INKKPEDTTVVVAMSGGVDSSTVAGMMKNEGYKVIGITLKLYDDGKEVAKSKQCCSGQDI 69
Query: 61 VELMPKWKDSLGEDHIL 77
++ E IL
Sbjct: 70 MDAKRVAHKLNIEHKIL 86
>gi|254361917|ref|ZP_04978050.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica PHL213]
gi|153093458|gb|EDN74446.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica PHL213]
Length = 483
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 58/189 (30%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + V V R + + A+ +A
Sbjct: 225 YHIWSRYSTSHKVRFIAINFENVVGEILEKVDNGQMG------VVLKR--MMVRAASRIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 ERFDIQAIVTGEALGQVSS---------QTLTNLRLIDKASDTLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 328 AKAIGTDDI 336
>gi|240103159|ref|YP_002959468.1| putative ATPase of the PP-loop superfamily [Thermococcus
gammatolerans EJ3]
gi|239910713|gb|ACS33604.1| Predicted ATPase of the PP-loop superfamily [Thermococcus
gammatolerans EJ3]
Length = 262
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+LFSGG+DSS L + V L+F
Sbjct: 21 KRILVLFSGGKDSSLTLYLLKEAGLDVSALTF 52
>gi|206896303|ref|YP_002246574.1| hypothetical protein COPRO5265_0204 [Coprothermobacter
proteolyticus DSM 5265]
gi|206738920|gb|ACI17998.1| conserved protein [Coprothermobacter proteolyticus DSM 5265]
Length = 341
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ L SGG DS LD+ V +SF
Sbjct: 12 RAIALLSGGLDSMLAAKLILDQGIEVIGISF 42
>gi|167756870|ref|ZP_02428997.1| hypothetical protein CLORAM_02419 [Clostridium ramosum DSM 1402]
gi|237734580|ref|ZP_04565061.1| thiamine biosynthesis protein thiI [Mollicutes bacterium D7]
gi|167703045|gb|EDS17624.1| hypothetical protein CLORAM_02419 [Clostridium ramosum DSM 1402]
gi|229382400|gb|EEO32491.1| thiamine biosynthesis protein thiI [Coprobacillus sp. D7]
Length = 398
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 59/185 (31%), Gaps = 38/185 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPK 66
ALL+ SGG DS L R +E + F Y EL +V+ +
Sbjct: 178 KALLMMSGGIDSPVAGYLTLKRGVDIECIHFAAPPY----TNELAREKVF--DLVDKLRH 231
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ H++ L + + ++ AM + + + +A +
Sbjct: 232 YTHGSIRVHVINFTKLQLAVYDNCDESYAMTVMRR------------MMYRISEKIANKN 279
Query: 127 GITNIV----IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+V IG + + + + + + V P++ L K E
Sbjct: 280 NCLALVNGESIGQVAS-------------QTLNSMQVINEVVKIPVLRPVLCLDKLEIID 326
Query: 183 LAQDI 187
+A I
Sbjct: 327 IADRI 331
>gi|281355523|ref|ZP_06242017.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Victivallis vadensis ATCC BAA-548]
gi|281318403|gb|EFB02423.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Victivallis vadensis ATCC BAA-548]
Length = 358
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECR-LCVRKKIVELM 64
++ SGG DSS A V ++ ++ E LC K +
Sbjct: 1 MKEKVIVALSGGVDSSVAAVLAQQAGCEVIGVTLR--LKHPDPEFSAAQLCASKNDEAAV 58
Query: 65 PKWKDSLGEDH 75
LG +H
Sbjct: 59 ESICAKLGIEH 69
>gi|52548696|gb|AAU82545.1| thiamine biosynthesis ATP pyrophosphatase [uncultured archaeon
GZfos18C8]
Length = 381
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 32/181 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL----ECRLCVRKKIVELMPKW 67
+ L SGG DS + R V L FD +E + R + I L
Sbjct: 175 IALVSGGIDSPVAAWMLMRRGAEVIPLYFD------LEEFTDPKSRELAEQSINSLFEWS 228
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + A+L +I+ + + + + +A +
Sbjct: 229 YSDMTAYRVPYGAVLREIASRCEPRITCVICKR-------------MMYRIGTLIAEKEY 275
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G + + + + + ++ PL+ + K E A I
Sbjct: 276 ACGIVTGSSLGQVAS---------QTSQNMLAEMHGLGMPIYHPLIGMDKREIIDRATRI 326
Query: 188 G 188
G
Sbjct: 327 G 327
>gi|114289|sp|P13256|ASSY_METVA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|150046|gb|AAA88322.1| argininosuccinate synthetase [Methanococcus vannielii]
Length = 397
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 74/196 (37%), Gaps = 34/196 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A+L +SGG D+S CL D++ +V +++ D GQ + +L+ KK+ L
Sbjct: 2 QEKIAVLAYSGGLDTSCCLKLLEDKYNYKVVSVAVDVGQ-PEDDLKEPEEKAKKLGVLKH 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
D+ E + I I ++L + + R +I + A LA
Sbjct: 61 YTIDAKEEFAV--DYIFRAIKANALYEGYPLSTAL---------ARPLIAIKIAE-LAKE 108
Query: 126 LGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL--MWLKKYE 179
+G I G C E+ I + + P+ + L + E
Sbjct: 109 IGADAISHG-----------CTGKGNDQF--RFESVIR-TKAPEIEIIAPVRDLNLTRTE 154
Query: 180 TWKLAQDIGGQDLVNL 195
+ A++ G V+L
Sbjct: 155 EIQYAKEKGIPIPVDL 170
>gi|309388972|gb|ADO76852.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Halanaerobium praevalens DSM 2228]
Length = 360
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 8/65 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVE--TLSF--DYGQRNKVELEC----RLCVRKKI 60
++ SGG DSS + + V T+ DY + E C + K++
Sbjct: 2 KKVMIAMSGGVDSSVAAALLKEEGYEVIGGTMHIFPDYEEATDREDHCCSYSAVRDAKRV 61
Query: 61 VELMP 65
+ +
Sbjct: 62 AQKLE 66
>gi|170727808|ref|YP_001761834.1| thiamine biosynthesis protein ThiI [Shewanella woodyi ATCC 51908]
gi|238688724|sp|B1KQY3|THII_SHEWM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|169813155|gb|ACA87739.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
woodyi ATCC 51908]
Length = 484
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 47/208 (22%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVE 62
+ L L SGG DS + R R F+ G ++++ + +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEI----------GVKQ 224
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ GE H + I + + KI + + + R + + AA +
Sbjct: 225 VAYHLWQKYGESHKVK---FISIPFDPVVTEILEKIDNGQMG--VILKR--MMMRAAAKV 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA----------INLGMESHVTVHTPL 172
A ++GI +V G A+ I+ + + PL
Sbjct: 278 ARKMGIQALVTG-----------------EAMGQVSSQTLTNLSIIDRCTDQ--LILRPL 318
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEES 200
+ + K + L++ IG +DL I E
Sbjct: 319 IAMDKQDIINLSRKIGTEDLSKSIPEYC 346
>gi|307182454|gb|EFN69689.1| Argininosuccinate synthase [Camponotus floridanus]
Length = 414
Score = 42.1 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 55/184 (29%), Gaps = 35/184 (19%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S L W + +V + GQ E VR+K +++
Sbjct: 5 KKKVILAYSGGLDTSCILFWLKKKGFQVIAYVANIGQ-----DEDFDAVREKALKIGAIK 59
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
I L + S+ + + L T V R I LA
Sbjct: 60 VV------IDDLKEVFVTSYVWPAVACGLLYEGRYLLGTSV-ARPCI--SQGLVKLAKAE 110
Query: 127 GITNIVIGVC--ETD--------YSGYPDCR-------HDTIRAIE---TAINLGMESHV 166
G I G D YS YPD + + + ++ +
Sbjct: 111 GANIIAHGATGKGNDQVRFELSCYSLYPDITVLAPWREREFYEKFQGRSDLLEYARQNDI 170
Query: 167 TVHT 170
+
Sbjct: 171 PISA 174
>gi|302879202|ref|YP_003847766.1| argininosuccinate synthase [Gallionella capsiferriformans ES-2]
gi|302581991|gb|ADL56002.1| argininosuccinate synthase [Gallionella capsiferriformans ES-2]
Length = 407
Score = 42.1 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ A+L +SGG D+S L W D + V T + D GQ ++E ++ I
Sbjct: 1 MSDIKKAVLAYSGGLDTSVILKWLQDTYQCEVVTFTADVGQGEELEPARAKALKMGI 57
>gi|323485784|ref|ZP_08091119.1| hypothetical protein HMPREF9474_02870 [Clostridium symbiosum
WAL-14163]
gi|323693136|ref|ZP_08107354.1| hypothetical protein HMPREF9475_02217 [Clostridium symbiosum
WAL-14673]
gi|323400772|gb|EGA93135.1| hypothetical protein HMPREF9474_02870 [Clostridium symbiosum
WAL-14163]
gi|323502619|gb|EGB18463.1| hypothetical protein HMPREF9475_02217 [Clostridium symbiosum
WAL-14673]
Length = 359
Score = 42.1 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 4/101 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
+ ++ SGG DSS ++ V ++ Q + E++ C V+
Sbjct: 2 EKKKVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEEPEIQEENGGCCGLSAVDDA 61
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+ ++LG + + ++ + + PN
Sbjct: 62 RRVAENLGIPYYVM--NFKREFKENVMDYFVQEYIEGKTPN 100
>gi|223041195|ref|ZP_03611447.1| tRNA methyl transferase [Campylobacter rectus RM3267]
gi|222877554|gb|EEF12683.1| tRNA methyl transferase [Campylobacter rectus RM3267]
Length = 328
Score = 42.1 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL+LFSGG DS + + V + D G + + +R++ E + K
Sbjct: 2 KALVLFSGGLDSMIAIRLLTAQGIDVTAIHIDIG--FSGDEKKAEILRRRANEAGAELK 58
>gi|222149632|ref|YP_002550589.1| tRNA-specific 2-thiouridylase MnmA [Agrobacterium vitis S4]
gi|221736614|gb|ACM37577.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Agrobacterium vitis S4]
Length = 402
Score = 42.1 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 50/193 (25%), Gaps = 20/193 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS V ++ Y V C + I + +
Sbjct: 18 RVVVAMSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 77
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++L ++ P V + A LG
Sbjct: 78 TLGIPHYVLD---YEQRFRDTVINPFMDSYIAGETPIPCVACNQTVKFADLLATARELGA 134
Query: 129 TNIVIG-----------VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
+ G + + R ++ + PL L
Sbjct: 135 DALATGHYIRSRATPLPNDPGHRALF---RPIDSERDQSYFLFATTQEQIDYLRFPLGGL 191
Query: 176 KKYETWKLAQDIG 188
K ET KLA+D+G
Sbjct: 192 SKAETRKLAEDMG 204
>gi|257462397|ref|ZP_05626811.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. D12]
gi|317060061|ref|ZP_07924546.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D12]
gi|313685737|gb|EFS22572.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D12]
Length = 350
Score = 42.1 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 13/66 (19%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSST R + ++ R E + KK+ + + +
Sbjct: 19 LSGGVDSSTVAYLLKKRGYDIFGVTM----RTCHEEDA---DAKKVCQDLGI------QH 65
Query: 75 HILPLA 80
++L L
Sbjct: 66 YVLDLT 71
>gi|189501011|ref|YP_001960481.1| tRNA-specific 2-thiouridylase MnmA [Chlorobium phaeobacteroides
BS1]
gi|229486338|sp|B3EN11|MNMA_CHLPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|189496452|gb|ACE05000.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium phaeobacteroides BS1]
Length = 359
Score = 42.1 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++K ++ SGG DS+ ++ RV L
Sbjct: 1 MMKDKEHVIVGISGGVDSAVAACILIENGYRVTGLHI 37
>gi|77361203|ref|YP_340778.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas haloplanktis
TAC125]
gi|76876114|emb|CAI87336.1| thiamine biosynthesis protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 485
Score = 42.1 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R L F+ G + K
Sbjct: 176 PLPTQEDVLSLMSGGFDSGVASYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASY 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + + + + + + +N+ V R + + + +A
Sbjct: 229 Y-LWNKYSSTHKVKFITVDFEPVVAEILENIENSQMG------VVLKR--MMMRAGSKVA 279
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+L I +V G S + + + + + PL+ K E +
Sbjct: 280 EKLNIQALVTGESIGQVSS---------QTLANLSVIDRVTETLILRPLIQHDKQEIINI 330
Query: 184 AQDIGGQDLVNL 195
A+ IG ++
Sbjct: 331 ARQIGTAEMAET 342
>gi|326391356|ref|ZP_08212895.1| Queuosine synthesis-like protein [Thermoanaerobacter ethanolicus JW
200]
gi|325992619|gb|EGD51072.1| Queuosine synthesis-like protein [Thermoanaerobacter ethanolicus JW
200]
Length = 266
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 68/196 (34%), Gaps = 44/196 (22%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
M + + + +AL+ FSGG DS+ A +D RV ++ K EL+ + +
Sbjct: 1 MQEYLSRLDNALIAFSGGVDST---FLAKVSYDVLGNRVLAVTATSPMHPKSELKEAVEL 57
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
KKI ++ + +I I +NL + F
Sbjct: 58 AKKIG----------LPHLVVEFNDILEIEEFKKNPLNRCYICKSNLFSRF--------- 98
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-- 174
+A G I+ G D S + R + + +PL+
Sbjct: 99 ---KAIAEEKGFKYILEGTNADDVSDF---RP----------GRRALKELGILSPLLECG 142
Query: 175 LKKYETWKLAQDIGGQ 190
+KK E L++++G
Sbjct: 143 IKKEEIRILSKEMGLP 158
>gi|299144367|ref|ZP_07037447.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298518852|gb|EFI42591.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 391
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 59/184 (32%), Gaps = 29/184 (15%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKWKDSLGEDHI 76
DS R +++ L F + + + +++ + +L +
Sbjct: 188 IDSPVAGFLMAKRGVQIDALHF-----HSYPFTSDRAEEKVHNLAKILSAYTGNLTIYSV 242
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
L I +I+ + + + + + A ++ + G +I+ G
Sbjct: 243 NLLPIQKEINKNCPEDEMTIISRR-------------FMMRIAEKISDKNGYNSIITGEN 289
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
+ TI + + + + PL+ L K + +A+ IG + L
Sbjct: 290 LGQVAS------QTIDGLNVTNRI---TDRLIFRPLIGLDKVDIMDIAKKIGTYETSILP 340
Query: 197 LEES 200
E+
Sbjct: 341 FEDC 344
>gi|303286641|ref|XP_003062610.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456127|gb|EEH53429.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 758
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 49/205 (23%)
Query: 15 FSGGQDSSTCLSWALDR-------FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SGG DS V + DY R + +E + + W
Sbjct: 283 LSGGVDSMALAVILKRLSRDASYGGFDVVAMHIDYDNRPESGVEA---------DFVRGW 333
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D +G + ++ I+ + + + + + + A T A+
Sbjct: 334 CDRMGIECVV-----RKIAEVTRGVTPREQYEAESRAIRY-----GFYKDVAKTHAFP-- 381
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRA-----IETAINLGME-----SHVTVHTPLMWLKK 177
+ +G E D + I A GME V + P++ K
Sbjct: 382 --AVFVGHHEGDV-------QENIIANLMRGANLLAVNGMEETGVVEGVAIWRPMLPHSK 432
Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
A G ++ + +
Sbjct: 433 AVVLDFAHKYGVPYFLDS--TPTWS 455
>gi|154251830|ref|YP_001412654.1| argininosuccinate synthase [Parvibaculum lavamentivorans DS-1]
gi|171769581|sp|A7HSW4|ASSY_PARL1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|154155780|gb|ABS62997.1| Argininosuccinate synthase [Parvibaculum lavamentivorans DS-1]
Length = 410
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
M+ K +L +SGG D+S L W + + V T + D GQ ++E +
Sbjct: 1 MSGATKDVKKVVLAYSGGLDTSVILKWLQETYGCEVVTFTADLGQGEELEPARKKAEMLG 60
Query: 60 IVEL-MPKWKDSLGEDHILPL 79
+ E+ + ++ D + P+
Sbjct: 61 VKEIYIEDLREEFVRDFVFPM 81
>gi|110669560|ref|YP_659371.1| argininosuccinate synthase [Haloquadratum walsbyi DSM 16790]
gi|119361280|sp|Q18E36|ASSY_HALWD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|109627307|emb|CAJ53797.1| argininosuccinate synthase [Haloquadratum walsbyi DSM 16790]
Length = 397
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 15 FSGGQDSSTCLSWALDR--FDRVETLSFDYGQ-RNKVELECRLCVRKKI 60
FSGG D++ C+S + +D V ++ D GQ + E I
Sbjct: 8 FSGGLDTTVCVSLLKEEYGYDEVIGVTVDVGQPATEFEEAQATADAHGI 56
>gi|262306011|gb|ACY45598.1| gln amidotransferase [Argulus sp. Arg2]
Length = 196
Score = 42.1 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
K ++L SGG DSS C + ++V + D G
Sbjct: 42 KNNKVMVLLSGGVDSSVCAALLHKALSPEQVIAIHIDNG 80
>gi|296822020|ref|XP_002850217.1| argininosuccinate synthetase [Arthroderma otae CBS 113480]
gi|238837771|gb|EEQ27433.1| argininosuccinate synthetase [Arthroderma otae CBS 113480]
Length = 412
Score = 42.1 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ LL +SGG D+S L+W L++ V D GQ + E + KK+V
Sbjct: 1 MAPQEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQAEDFKEAERKALAVGAKKLV 60
>gi|146322787|ref|XP_749563.2| argininosuccinate synthase [Aspergillus fumigatus Af293]
gi|129556802|gb|EAL87525.2| argininosuccinate synthase [Aspergillus fumigatus Af293]
gi|159128973|gb|EDP54087.1| argininosuccinate synthase [Aspergillus fumigatus A1163]
Length = 416
Score = 42.1 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K + L FSGG D+S L W +D V + + GQ E +R+K ++L
Sbjct: 1 MSKGK--VCLAFSGGLDTSVILKWLIDEGYEVVAFTANVGQ-----EEDFDAIREKALKL 53
Query: 64 MPKWKD 69
+
Sbjct: 54 GAVKCE 59
>gi|89092122|ref|ZP_01165077.1| thiamin biosynthesis protein ThiI [Oceanospirillum sp. MED92]
gi|89083857|gb|EAR63074.1| thiamin biosynthesis protein ThiI [Oceanospirillum sp. MED92]
Length = 487
Score = 42.1 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 68/194 (35%), Gaps = 35/194 (18%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + L L SGG DS ++ R + L F+ G + E+ K++
Sbjct: 175 PLGTQEATLSLISGGFDSIVASYMSMRRGCKTHFLFFNLGG-HAHEIGV-----KQVALY 228
Query: 64 MPKWKDSLGEDHILPLAI---LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ + S + + +G+I S ++ + ++ + +
Sbjct: 229 LWQKYGSSARVKFITIPFDEVVGEILQSVHHSHMGVVLKR-------------MMMRAGE 275
Query: 121 TLAYRLGITNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
++ R+GI +V G + + P AI + V PL+ + K
Sbjct: 276 KVSDRMGIDALVTGESIAQVSSQTLP----------NLAIIDAATEKLVVR-PLVTMDKQ 324
Query: 179 ETWKLAQDIGGQDL 192
+ + ++IG D
Sbjct: 325 DIIDITREIGAYDF 338
>gi|312065441|ref|XP_003135792.1| hypothetical protein LOAG_00204 [Loa loa]
gi|307769046|gb|EFO28280.1| hypothetical protein LOAG_00204 [Loa loa]
Length = 996
Score = 42.1 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L++ SGG DS+ C + DRV + D G
Sbjct: 538 KKVLVMVSGGVDSTVCAALLHKALGSDRVIAVHIDNG 574
>gi|282896191|ref|ZP_06304214.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Raphidiopsis brookii D9]
gi|281198880|gb|EFA73758.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Raphidiopsis brookii D9]
Length = 350
Score = 42.1 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + ++ V L+
Sbjct: 1 MMKKVVVGLSGGVDSSVAAAILHNQGYDVIGLT 33
>gi|262306009|gb|ACY45597.1| gln amidotransferase [Amblyomma sp. 'Amb2']
Length = 196
Score = 42.1 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + R D+V L D G
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALREDQVIALHIDNG 80
>gi|332295333|ref|YP_004437256.1| Argininosuccinate synthase [Thermodesulfobium narugense DSM
14796]
gi|332178436|gb|AEE14125.1| Argininosuccinate synthase [Thermodesulfobium narugense DSM
14796]
Length = 400
Score = 42.1 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
+L +SGG D+S + W +++D V TL+ D GQ ++E
Sbjct: 1 MKKKVVLAYSGGLDTSVAIKWLQEKYDSEVITLTVDIGQGEEIE 44
>gi|302308231|ref|NP_985087.2| AER230Cp [Ashbya gossypii ATCC 10895]
gi|299789355|gb|AAS52911.2| AER230Cp [Ashbya gossypii ATCC 10895]
Length = 414
Score = 42.1 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ L +SGG D+S L+W L++ V + GQ + + + KI
Sbjct: 6 VCLAYSGGLDTSVILAWLLEQGYEVVAFMANVGQ--EEDFQAAEEKALKIGA 55
>gi|124005943|ref|ZP_01690781.1| argininosuccinate synthase [Microscilla marina ATCC 23134]
gi|123988626|gb|EAY28267.1| argininosuccinate synthase [Microscilla marina ATCC 23134]
Length = 405
Score = 42.1 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 20/138 (14%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELE--CRLCVR 57
M D +L FSGG D+S C A ++ V ++ + G + EL+ + +
Sbjct: 1 MTDT--SNNKVVLAFSGGLDTSYCAQYLAQEKGMEVYAVAVNTGGFSDEELKQIAQRAEQ 58
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+V+ + + + I G+I + + + + + F
Sbjct: 59 LNVVDFKVLDCTNQYYEECVKYLIFGNILRN---QTYPLSVSAERM-----------FQA 104
Query: 118 FAAT-LAYRLGITNIVIG 134
A LG + G
Sbjct: 105 LAVANYTQELGAKYVAHG 122
>gi|325844820|ref|ZP_08168272.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Turicibacter sp. HGF1]
gi|325489007|gb|EGC91395.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Turicibacter sp. HGF1]
Length = 377
Score = 42.1 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS ++ VE +
Sbjct: 4 NKGKKVIVGMSGGVDSSVAAYLLKEQGYEVEGV 36
>gi|295696494|ref|YP_003589732.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
tusciae DSM 2912]
gi|295412096|gb|ADG06588.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
tusciae DSM 2912]
Length = 410
Score = 42.1 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
A+LL SGG DS + R +VE + FD
Sbjct: 188 RAMLLLSGGIDSPVAGWMTMKRGVQVEAVHFD 219
>gi|293374251|ref|ZP_06620579.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Turicibacter sanguinis PC909]
gi|292647084|gb|EFF65066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Turicibacter sanguinis PC909]
Length = 377
Score = 42.1 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS ++ VE +
Sbjct: 4 NKGKKVIVGMSGGVDSSVAAYLLKEQGYEVEGV 36
>gi|322419745|ref|YP_004198968.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sp. M18]
gi|320126132|gb|ADW13692.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sp. M18]
Length = 356
Score = 42.1 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + ++ SGG DSS + ++ V +S
Sbjct: 1 MSEKKRIVVAMSGGVDSSVTAALLKEQGHDVIGVS 35
>gi|221069865|ref|ZP_03545970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Comamonas testosteroni KF-1]
gi|220714888|gb|EED70256.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Comamonas testosteroni KF-1]
Length = 376
Score = 42.1 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DS+ + V +
Sbjct: 1 MSNKQRVVVGLSGGVDSAVTAYLLKQQGHEVVGI 34
>gi|312136706|ref|YP_004004043.1| pp-loop domain protein [Methanothermus fervidus DSM 2088]
gi|311224425|gb|ADP77281.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
Length = 323
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ FSGG DS+ L A + + V ++ D G K ++ + ++I K++
Sbjct: 23 VAFSGGVDSTLLLKIAKEVSNEVIAVTVDIGAIPKNQITEAKKIAREIGVKHKIIKENFL 82
Query: 73 E 73
E
Sbjct: 83 E 83
>gi|262306051|gb|ACY45618.1| gln amidotransferase [Hadrurus arizonensis]
Length = 196
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
L+L SGG DS+ C + + D+V + D G K E + V + + +L
Sbjct: 43 NNRVLMLVSGGVDSTVCAALLHKALKEDQVIAIHIDNGFMRKNE---SVQVEQSLRKLGL 99
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
K + H I T+ +
Sbjct: 100 KLQVINASHHFYDGTTTVPIDRKDPTRKRTTE 131
>gi|315186510|gb|EFU20269.1| argininosuccinate synthase [Spirochaeta thermophila DSM 6578]
Length = 421
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K+ +L +SGG D+S + W +++ V + D GQ+ E + + +
Sbjct: 1 MKEIKKIVLAYSGGLDTSIIIPWLKEQYPGCEVVAVCTDVGQKEDWEALKQKAIASGASK 60
Query: 63 LMP-KWKDSLGEDHILPLAILGDI 85
+ K+ L D+I P+ G I
Sbjct: 61 IYVLDVKEELVRDYIFPMLRAGAI 84
>gi|303241870|ref|ZP_07328364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acetivibrio cellulolyticus CD2]
gi|302590544|gb|EFL60298.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acetivibrio cellulolyticus CD2]
Length = 360
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 70/203 (34%), Gaps = 34/203 (16%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQ-----RNKVELECRLCVRKKI 60
++++ SGG DSS + L++ V ++ Q + +V+L C
Sbjct: 1 MTKKSVMIGMSGGVDSSVAAAVLLEKGYDVIGVTM---QIWPETKEEVKLTEGGCCSLSA 57
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFL 116
V+ +SLG + + ++ + + PN P R++ F
Sbjct: 58 VDDARGVANSLGIPYYV--LNFKEVFEEKVINYFIDEYLKGKTPN---PCIACNRHVKFE 112
Query: 117 VFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTI--------RAIETAINLGMESHV 166
+ A +G+ + G Y+ Y + R + + A+ + +
Sbjct: 113 SL-LSKAVSMGLDYVATG----HYAIIEYDENRKRYLLKKSVTQQKDQTYALYNLTQDQL 167
Query: 167 -TVHTPLMWLKKYETWKLAQDIG 188
V P+ K + A ++G
Sbjct: 168 SKVLMPIGNYSKDVVRQKAAELG 190
>gi|295134761|ref|YP_003585437.1| tRNA methyl transferase [Zunongwangia profunda SM-A87]
gi|294982776|gb|ADF53241.1| tRNA methyl transferase [Zunongwangia profunda SM-A87]
Length = 395
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KKVVVGLSGGVDSSVSAYLLKEQGYEVIGL 31
>gi|322420793|ref|YP_004200016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sp. M18]
gi|320127180|gb|ADW14740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sp. M18]
Length = 357
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 60/202 (29%), Gaps = 43/202 (21%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVR 57
M+ K A+ SGG DSST + ++ V ++ F R + E
Sbjct: 1 MSADYKGKKIAVA-MSGGVDSSTVAALLKEQGAEVIGINMKLF----RREGEDPQAKGDA 55
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVPGRNIIFL 116
+ + E + + L I ++ + + + + N +V + L
Sbjct: 56 RIVAEYLGIEFHQVH----LEEEFARLIMEDFRSQYLGGETPNPCVRCNRYVKF--GLLL 109
Query: 117 VFAATLAYRLGITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-- 170
A LG + G D Y + A +L + ++T
Sbjct: 110 D----KALELGADYLATGHYVRTSRDDSGTY---------HLLKAAHLAKDQSYFLYTLT 156
Query: 171 ---------PLMWLKKYETWKL 183
PL + + +
Sbjct: 157 QPQLARVLFPLGDMPSKDEVRK 178
>gi|255690530|ref|ZP_05414205.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides finegoldii DSM 17565]
gi|260623984|gb|EEX46855.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides finegoldii DSM 17565]
Length = 361
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MKERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAARMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LV 117
+ + +K+++ ++ I + + PN V N +F
Sbjct: 59 YVADERIPFKETIVKNFI-------------------DEYKQGRTPNPCVMC-NPLFKFR 98
Query: 118 FAATLAYRLGITNIVIG 134
A +L I G
Sbjct: 99 VLTEWADKLDCDWIATG 115
>gi|120436568|ref|YP_862254.1| tRNA methyl transferase [Gramella forsetii KT0803]
gi|205816859|sp|A0M3J2|MNMA_GRAFK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|117578718|emb|CAL67187.1| tRNA methyl transferase [Gramella forsetii KT0803]
Length = 395
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KKVVVGLSGGVDSSVSAYLLKEQGYEVIGL 31
>gi|305667726|ref|YP_003864013.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Maribacter sp. HTCC2170]
gi|88709776|gb|EAR02009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Maribacter sp. HTCC2170]
Length = 396
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KKVVIGLSGGVDSSVAAYLLKEQGYEVIGL 31
>gi|294495633|ref|YP_003542126.1| argininosuccinate synthase [Methanohalophilus mahii DSM 5219]
gi|292666632|gb|ADE36481.1| argininosuccinate synthase [Methanohalophilus mahii DSM 5219]
Length = 394
Score = 42.1 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQ-RNKVELECRLCVRKKIVEL 63
A+L +SGG D+S C+ +++ D V T++ D GQ R VE + +
Sbjct: 1 MVKKAVLAYSGGLDTSICVPLLKEKYDCDEVITVAVDVGQPREDVEEATKKAQDISDLHF 60
Query: 64 MPKWKDSLGEDHILPL 79
++ +D+I PL
Sbjct: 61 TLDVREEFVKDYIFPL 76
>gi|253995996|ref|YP_003048060.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylotenera mobilis JLW8]
gi|253982675|gb|ACT47533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylotenera mobilis JLW8]
Length = 369
Score = 42.1 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + ++ SGG DSS + V L
Sbjct: 1 MNLNKAQKKKIVVGLSGGVDSSVTALLLKQQGYEVTGL 38
>gi|297624396|ref|YP_003705830.1| NAD+ synthetase [Truepera radiovictrix DSM 17093]
gi|297165576|gb|ADI15287.1| NAD+ synthetase [Truepera radiovictrix DSM 17093]
Length = 296
Score = 42.1 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 57/197 (28%), Gaps = 53/197 (26%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DS+ A F + V L Y R + +V+ +
Sbjct: 54 DRVVVPLSGGIDSAVTAYLAARAFGPENVHALRLPY--RASDPDSLAH--AQLVVDALGL 109
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NII----FLVFAA 120
++L ++ + + V P R N++ + A
Sbjct: 110 PAETLDITEMVD----------AYARLVPD----------VTPHRLGNVMARVRMI-VAF 148
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT---PLMWLKK 177
A LG ++ G + GY V PL L K
Sbjct: 149 DKAAELGAVHLGTGNKTERFFGY-----------------YTWHDVADAAPVSPLGDLFK 191
Query: 178 YETWKLAQDIGGQDLVN 194
+ LA+ +G + V
Sbjct: 192 TQVRALAEHLGVPEAVR 208
>gi|164659440|ref|XP_001730844.1| hypothetical protein MGL_1843 [Malassezia globosa CBS 7966]
gi|159104742|gb|EDP43630.1| hypothetical protein MGL_1843 [Malassezia globosa CBS 7966]
Length = 427
Score = 42.1 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
LL +SGG D+ST L+W +D V + GQ
Sbjct: 3 TTSNGRVLLAYSGGLDTSTILAWLIDEGYEVIAYMANVGQ 42
>gi|332288104|ref|YP_004418956.1| thiamine biosynthesis protein ThiI [Gallibacterium anatis UMN179]
gi|330431000|gb|AEC16059.1| thiamine biosynthesis protein ThiI [Gallibacterium anatis UMN179]
Length = 487
Score = 42.1 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 59/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS L R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLLRRGCRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + + V R + + A+ +A
Sbjct: 225 YHIWNRYGSSHKVRFVAINFEKVVAEILEKIDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 DRFQIQAIVTGEALGQVSS---------QTLTNLRLIDEAADCLVLRPLISSDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 328 AKQIGTDDI 336
>gi|328875337|gb|EGG23702.1| GMP synthetase [Dictyostelium fasciculatum]
Length = 692
Score = 42.1 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG-QRNK 47
L+L SGG DS+ C + +RV L D G R+
Sbjct: 252 KVLVLVSGGVDSTVCAALLTKAIGAERVVALHIDNGFMRHH 292
>gi|291222319|ref|XP_002731165.1| PREDICTED: guanine monophosphate synthetase-like [Saccoglossus
kowalevskii]
Length = 578
Score = 42.1 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L L SGG DS+ C + D V + D G K E + V + + EL K
Sbjct: 130 KVLALVSGGVDSTVCAALLHKALDNSQVIAVHIDNGFMRKNESQS---VAESLSELGLKL 186
Query: 68 KDSLGEDH 75
K + H
Sbjct: 187 KGIVNASH 194
>gi|15790733|ref|NP_280557.1| GMP synthase subunit B [Halobacterium sp. NRC-1]
gi|169236476|ref|YP_001689676.1| GMP synthase subunit B [Halobacterium salinarum R1]
gi|13626903|sp|Q9HP33|GUAAB_HALSA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|226738370|sp|B0R6G1|GUAAB_HALS3 RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|10581275|gb|AAG20037.1| GMP synthase subunit B [Halobacterium sp. NRC-1]
gi|167727542|emb|CAP14330.1| GMP synthase (glutamine-hydrolyzing) subunit B [Halobacterium
salinarum R1]
Length = 305
Score = 42.1 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 73/191 (38%), Gaps = 36/191 (18%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+A++ SGG DSST + A + D++ + D G +RK + + +
Sbjct: 22 ETAIIALSGGVDSSTAAALAYEAVGDQLVPVYVDTG-----------LMRKGETDEIREV 70
Query: 68 KDSLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
D + ++ + +++ + + I + F+ T+A
Sbjct: 71 FDYMDSLRVVDASDRFFDELAGVTDPEEKRHAIGEQ-------------FIREFETVAEE 117
Query: 126 LGITNIVIGVCETDYSGYPD--CRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWK 182
+ T +V G + YPD TI++ L + P+ L K E +
Sbjct: 118 VDATQLVQG------TIYPDRIESEGTIKSHHNVGGLPERVGFEGIVEPMRDLYKDEVRE 171
Query: 183 LAQDIGGQDLV 193
+A+ +G ++++
Sbjct: 172 VARHLGLEEII 182
>gi|163789149|ref|ZP_02183592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Flavobacteriales bacterium ALC-1]
gi|159875562|gb|EDP69623.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Flavobacteriales bacterium ALC-1]
Length = 395
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KRVIVGLSGGVDSSVAAYLLKEQGYEVIGL 31
>gi|150402761|ref|YP_001330055.1| ExsB family protein [Methanococcus maripaludis C7]
gi|150033791|gb|ABR65904.1| ExsB family protein [Methanococcus maripaludis C7]
Length = 261
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
D + A++ FSGG DS+T + A ++ + ++
Sbjct: 57 TDPNLEKEKAVVAFSGGVDSTTSIIIA-NQIFEICAVTVR 95
>gi|60683221|ref|YP_213365.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis NCTC 9343]
gi|81313727|sp|Q5L8X6|MNMA3_BACFN RecName: Full=tRNA-specific 2-thiouridylase mnmA 3
gi|60494655|emb|CAH09456.1| putative tRNA methyltransferase [Bacteroides fragilis NCTC 9343]
gi|301164740|emb|CBW24299.1| putative tRNA methyltransferase [Bacteroides fragilis 638R]
Length = 362
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ + L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MKESKKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAARMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LV 117
+ + +KD++ ++ I + + PN V N +F
Sbjct: 59 YVADERVPFKDTIVKNFI-------------------DEYRQGRTPNPCVMC-NPLFKFR 98
Query: 118 FAATLAYRLGITNIVIG 134
A +LG I G
Sbjct: 99 MLIEWADKLGCDWIATG 115
>gi|53715285|ref|YP_101277.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis YCH46]
gi|81608253|sp|Q64P39|MNMA3_BACFR RecName: Full=tRNA-specific 2-thiouridylase mnmA 3
gi|52218150|dbj|BAD50743.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
methyltransferase [Bacteroides fragilis YCH46]
Length = 362
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ + L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MKESKKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAARMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LV 117
+ + +KD++ ++ I + + PN V N +F
Sbjct: 59 YVADERVPFKDTIVKNFI-------------------DEYRQGRTPNPCVMC-NPLFKFR 98
Query: 118 FAATLAYRLGITNIVIG 134
A +LG I G
Sbjct: 99 MLIEWADKLGCDWIATG 115
>gi|148260759|ref|YP_001234886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidiphilium cryptum JF-5]
gi|205811039|sp|A5FZD5|MNMA_ACICJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|146402440|gb|ABQ30967.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidiphilium cryptum JF-5]
Length = 345
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 10/129 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + C + I +
Sbjct: 2 RVVVAMSGGVDSSVVAGLMHEAGHEVIGVTLQLYDHGAATGRKGACCAGQDIHDARNVAD 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG-R-NIIF-LVFAATLAYR 125
+++ +++ + A + P VP R N LA
Sbjct: 62 RLGIAHYVID---AEAAFRAAVIGDFAESYAEGRTP---VPCVRCNQHLKFGDLLGLARD 115
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 116 LGAEALATG 124
>gi|88703376|ref|ZP_01101092.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Congregibacter litoralis KT71]
gi|88702090|gb|EAQ99193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Congregibacter litoralis KT71]
Length = 372
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 45/139 (32%), Gaps = 15/139 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKK 59
M K ++ SGG DSS L++ VE L +N E + C K
Sbjct: 1 MTAPAKNTEKVIVGMSGGVDSSVAALILLEQGYDVEGLFM----KNWDEDDGTEYCTAKV 56
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIF 115
D LG L A ++ ++ + + PN P R I F
Sbjct: 57 DYADAQAVADKLGI--TLHAANFAAEYWDNVFEHFLDEYRAGRTPN---PDILCNREIKF 111
Query: 116 LVFAATLAYRLGITNIVIG 134
F A LG I G
Sbjct: 112 RAF-LDYALELGADRIATG 129
>gi|332306349|ref|YP_004434200.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173678|gb|AEE22932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Glaciecola agarilytica 4H-3-7+YE-5]
Length = 377
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 24/139 (17%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELM 64
++ SGG DSS L + +VE L +N E + C + ++
Sbjct: 15 NSQKKVIVGMSGGVDSSVSAYILLQQGYQVEGLFM----KNWEEDDNDEYCAAAEDLKDA 70
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---------F 115
D LG + L I+ ++ + + + P +I+ F
Sbjct: 71 QAVADKLGIE-------LHQINFAAEYWDNVFEYFLEEYKSGRTPNPDIMCNKEIKFKAF 123
Query: 116 LVFAATLAYRLGITNIVIG 134
L FA A L I G
Sbjct: 124 LEFA---AEELEADYIATG 139
>gi|257869992|ref|ZP_05649645.1| thiamine biosynthesis protein [Enterococcus gallinarum EG2]
gi|257804156|gb|EEV32978.1| thiamine biosynthesis protein [Enterococcus gallinarum EG2]
Length = 399
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 63/192 (32%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +A+ R +E + F +K +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTKKLTP 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAYRLGI 128
+G + + + + + + + + T R + L +
Sbjct: 233 YVGGIQFIEVPF------TEVQEEIKKHVPQGYWMTIT----RRM-MLRLTDAIREARHG 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + + +++ + + ++ + P+ + K E +AQ+I
Sbjct: 282 LIILNGESLGQVAS---------QTLQSMVAINEVTNTPIIRPVATMDKLEIIDVAQEID 332
Query: 189 GQDLVNLILEES 200
+L E+
Sbjct: 333 TFELAIQPFEDC 344
>gi|255008100|ref|ZP_05280226.1| putative cell-cycle protein [Bacteroides fragilis 3_1_12]
gi|313145817|ref|ZP_07808010.1| tRNA(Ile)-2-lysyl-cytidine synthase [Bacteroides fragilis 3_1_12]
gi|313134584|gb|EFR51944.1| tRNA(Ile)-2-lysyl-cytidine synthase [Bacteroides fragilis 3_1_12]
Length = 431
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 59/194 (30%), Gaps = 37/194 (19%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DS L L E ++ R E + +++
Sbjct: 19 NDKVLVALSGGADSVALLRLLLSMGYTCEATHCNFHLR-DKESDRDEAFVRQLCHEAEVP 77
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
++ D I + K++++++ L + TL + G
Sbjct: 78 LHTVHFDTI----------QYAADKHISIEMAARELRYEWFE-----------TLRKQRG 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTI-------RAIETAINLGMESHVTVHTPLMWLKKYET 180
I + + D +T+ I + + ++ + PL+ L + E
Sbjct: 117 AAVIAVAHHKDD-------SVETVLLNLIRGTGINGLLGIRPKNG-NIVRPLLCLSRDEI 168
Query: 181 WKLAQDIGGQDLVN 194
Q + + +
Sbjct: 169 ITYLQRMNQDYVTD 182
>gi|227903173|ref|ZP_04020978.1| cell cycle [Lactobacillus acidophilus ATCC 4796]
gi|227868978|gb|EEJ76399.1| cell cycle [Lactobacillus acidophilus ATCC 4796]
Length = 418
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 60/206 (29%), Gaps = 55/206 (26%)
Query: 7 KAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRL----CVRK 58
+ L+ SGG DS L + + F++ R+ E E R+ C +
Sbjct: 15 ENKKLLVAASGGPDSMALLDMLKDLQKKQKFELIAAHFNHQLRSDSEEETRILKDYCQKN 74
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+I + KW + + + V FL
Sbjct: 75 EIPLFVAKWAKN----------EQPKSGIEAAAREVRYN-----------------FLT- 106
Query: 119 AATLAYRLGITNIVIGVCETDY----------SGYPDCRHDTIRAIETAINLGMESHVTV 168
+A ++ D SG P + + +G+ VT+
Sbjct: 107 --KIAKNETADYLLTAHHGDDLIENILLKFIRSGNP-------EEMNSLQAVGVMHGVTL 157
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVN 194
PL+ K E ++ G +V+
Sbjct: 158 LRPLLSSSKQEILAYDKERGISFIVD 183
>gi|58336616|ref|YP_193201.1| cell cycle [Lactobacillus acidophilus NCFM]
gi|58253933|gb|AAV42170.1| putative cell cycle [Lactobacillus acidophilus NCFM]
Length = 423
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 60/206 (29%), Gaps = 55/206 (26%)
Query: 7 KAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRL----CVRK 58
+ L+ SGG DS L + + F++ R+ E E R+ C +
Sbjct: 20 ENKKLLVAASGGPDSMALLDMLKDLQKKQKFELIAAHFNHQLRSDSEEETRILKDYCQKN 79
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+I + KW + + + V FL
Sbjct: 80 EIPLFVAKWAKN----------EQPKSGIEAAAREVRYN-----------------FLT- 111
Query: 119 AATLAYRLGITNIVIGVCETDY----------SGYPDCRHDTIRAIETAINLGMESHVTV 168
+A ++ D SG P + + +G+ VT+
Sbjct: 112 --KIAKNETADYLLTAHHGDDLIENILLKFIRSGNP-------EEMNSLQAVGVMHGVTL 162
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVN 194
PL+ K E ++ G +V+
Sbjct: 163 LRPLLSSSKQEILAYDKERGISFIVD 188
>gi|20904364|gb|AAM29733.1| Argininosuccinate synthase [Methanosarcina mazei Go1]
Length = 414
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
L +SGG D+S C+ ++ +D V T+S D GQ + E+ +KI
Sbjct: 20 SMVKKVALAYSGGLDTSVCIPILKEKYGYDEVITISVDVGQ-PEEEIRKADAKAQKISNK 78
Query: 62 ELMPKWKDSLGEDHILPL 79
K+ D+I PL
Sbjct: 79 HYTIDAKEEFVRDYIFPL 96
>gi|62185345|ref|YP_220130.1| hypothetical protein CAB732 [Chlamydophila abortus S26/3]
gi|81312504|sp|Q5L5B2|TILS_CHLAB RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|62148412|emb|CAH64179.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
Length = 317
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 5/74 (6%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ S LL SGG DS L R + DYG R E +++
Sbjct: 17 SALDMKKSYLLALSGGSDSLFLLYLLKSRGVSFTAVHVDYGWR-----ESSYREAEELKL 71
Query: 63 LMPKWKDSLGEDHI 76
+ L DH+
Sbjct: 72 RCQEEGVPLIVDHV 85
>gi|239994884|ref|ZP_04715408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alteromonas macleodii ATCC 27126]
Length = 369
Score = 42.1 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 51/145 (35%), Gaps = 25/145 (17%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRK 58
M+DI A +++ SGG DSS + +VE L +N E + C
Sbjct: 1 MSDIESNASKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNDEYCAAA 56
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---- 114
+ ++ D LG + L I+ ++ + + P +I+
Sbjct: 57 EDLKDAQAVADKLGIE-------LHTINFAAEYWDNVFEYFLEEYKAGRTPNPDIMCNKE 109
Query: 115 -----FLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 110 IKFKAFLEFA---AEDLGADYIATG 131
>gi|225619893|ref|YP_002721150.1| thiamine biosynthesis protein [Brachyspira hyodysenteriae WA1]
gi|225214712|gb|ACN83446.1| thiamine biosynthesis protein [Brachyspira hyodysenteriae WA1]
Length = 356
Score = 42.1 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 40/138 (28%), Gaps = 22/138 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV------ELECRLCVR 57
+ K A+LL SGG DS + V L F G V E+ +
Sbjct: 1 MSDKKAKAILLLSGGLDSMLVGAILKRENIDVLALRFVTGLEYAVIKEELLEIYSEDPAK 60
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
K L + +D L + + S++ + I + L
Sbjct: 61 KAADFLNIPIRFVSLKDVYLDMFLNPKYGYGSAINPCLDCHI---------------LML 105
Query: 117 VFAATLAYRLGITNIVIG 134
A + G I G
Sbjct: 106 KTAKKIMEEEGFDFIATG 123
>gi|20094082|ref|NP_613929.1| ATPase [Methanopyrus kandleri AV19]
gi|19887071|gb|AAM01859.1| Predicted ATPase of the PP-loop superfamily [Methanopyrus
kandleri AV19]
Length = 225
Score = 42.1 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRV-ETLSF 40
A+ L SGG+DS+ A++ + L+
Sbjct: 2 RAVALLSGGKDSTLAAHLAVEEGYELTHGLTV 33
>gi|328952124|ref|YP_004369458.1| Conserved hypothetical protein CHP00268 [Desulfobacca acetoxidans
DSM 11109]
gi|328452448|gb|AEB08277.1| Conserved hypothetical protein CHP00268 [Desulfobacca acetoxidans
DSM 11109]
Length = 258
Score = 42.1 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVE-LECRLCVRK 58
M +++ L+LFSGG DS+ L D F L+F+ R E LE R R
Sbjct: 1 MRALLRTWRRVLVLFSGGIDSTLLLKIVADLFGENSAALTFEGPHRPTGETLEARKITRL 60
Query: 59 KIVELMPKWKDSLG 72
V + + D G
Sbjct: 61 LGVRHLTEDFDPFG 74
>gi|168334381|ref|ZP_02692565.1| Argininosuccinate synthase [Epulopiscium sp. 'N.t. morphotype B']
Length = 403
Score = 42.1 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE--- 62
+L FSGG D+S + W + + V + + GQ EL K +
Sbjct: 1 MKEKVVLAFSGGLDTSVIVPWLRENYDYDVIAVCINVGQ--DKELXGLEDRAKAMGVAKL 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHS 88
+ K+ +D+I P+ G I S
Sbjct: 59 YIEDVKEEFAKDYIFPMLKSGAIYES 84
>gi|313906354|ref|ZP_07839695.1| conserved hypothetical protein [Eubacterium cellulosolvens 6]
gi|313468818|gb|EFR64179.1| conserved hypothetical protein [Eubacterium cellulosolvens 6]
Length = 430
Score = 42.1 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 72/242 (29%), Gaps = 44/242 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVE--LECRLCVRKKIV 61
L +FSGG DS L+ YG Q E +E +
Sbjct: 144 LCMFSGGMDSYIGAINLLEENLGRTLFVSHYGGGKGTKEYQDYIKEKLIEKYSVEDRDFC 203
Query: 62 ELMPKWKDSLGEDHILPLAILGDI----SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ K + + ED + + S+L K+V + I +N L + L
Sbjct: 204 QFYAKVVNGV-EDTTRSRSFMFFSHAVALASALNKSVEVIIPENGLIS----------LN 252
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
+ + I T + Y + + + + +V P + K
Sbjct: 253 IPLSY------SRIGTSSTRTTHPYY-------MSLFQK-LVDNLGLNVQFRNPYQFKTK 298
Query: 178 YETWKLAQDIGGQDLVNLILEESHTCY--LGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
E + Q+ + + + +C R + + C C C +RQ +
Sbjct: 299 GEML---LECKNQEFMKNHVHHTMSCSHPDAGRMQGEKTARHCGYCVPCVIRQAALKKAG 355
Query: 236 EK 237
Sbjct: 356 IN 357
>gi|170720303|ref|YP_001747991.1| argininosuccinate synthase [Pseudomonas putida W619]
gi|229889895|sp|B1J4I4|ASSY_PSEPW RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|169758306|gb|ACA71622.1| Argininosuccinate synthase [Pseudomonas putida W619]
Length = 405
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D +D V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYDCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|240103250|ref|YP_002959559.1| hypothetical protein TGAM_1193 [Thermococcus gammatolerans EJ3]
gi|239910804|gb|ACS33695.1| ATPase, putative, PP-loop superfamily [Thermococcus gammatolerans
EJ3]
Length = 206
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKD 69
L+SGG+DSS VE ++ +G R E RL +++EL + +
Sbjct: 9 LYSGGKDSSLAAWILSQLGYEVELVTVTFGLLDNWRYARETAERLGFPHRVLELPREILE 68
Query: 70 SLGEDHILPLAILGDI 85
GE I I
Sbjct: 69 KAGEIAISDGHPNNAI 84
>gi|240102131|ref|YP_002958439.1| NAD synthetase [Thermococcus gammatolerans EJ3]
gi|239909684|gb|ACS32575.1| NH(3)-dependent NAD synthetase (nadE) [Thermococcus gammatolerans
EJ3]
Length = 254
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 37/189 (19%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K+ ++ SGG DS+T A+ +RV L Y V+ + + +
Sbjct: 25 KSNGVVIGISGGVDSATTAYLAVKALGRERVLGLIMPYYNNQDVD------DARLVCSSL 78
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+G I+ + G + + ++ L A+
Sbjct: 79 GIECREIGIKPIVDSFVAGLGFQPDKRSLGNIMSRTR-----------MVLL-----YAH 122
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+V+G R + + T G + + PL+ L K E W++A
Sbjct: 123 ANAKNYLVLGTG---------NRSEFLTGYFTKWGDG----ASDYAPLINLYKTEVWEVA 169
Query: 185 QDIGGQDLV 193
+ +G + +
Sbjct: 170 KLLGVPERI 178
>gi|225851469|ref|YP_002731703.1| argininosuccinate synthase [Persephonella marina EX-H1]
gi|225645666|gb|ACO03852.1| argininosuccinate synthase [Persephonella marina EX-H1]
Length = 399
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
+L +SGG D+S + W D+ V T + D GQ ++ E+E + + ++
Sbjct: 1 MKKRVVLAYSGGLDTSVIVRWLTDKGFEVITYTADVGQGEELDEIEEKAKASGAVEAIID 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLT 91
K+ ++ +PL G + T
Sbjct: 61 DIKEEFAREYCMPLMRSGALYEGRYT 86
>gi|153854412|ref|ZP_01995690.1| hypothetical protein DORLON_01685 [Dorea longicatena DSM 13814]
gi|149752938|gb|EDM62869.1| hypothetical protein DORLON_01685 [Dorea longicatena DSM 13814]
Length = 395
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ SA+LL SGG DS R +E F + ++K+V+L
Sbjct: 178 PVGTNGSAMLLLSGGIDSPVAGYMVSKRGVSLEATYF-----HAPPYTSE-RAKQKVVDL 231
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K G + H++ + + + I + A
Sbjct: 232 AKKVAKYSGPIKLHVVNFTDIQLYIYDQCPHDELTIIMRRY------------MMRIAEH 279
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A G +G+ + G + +++ + V+ PL+ K E
Sbjct: 280 FAKEDGC----LGMITGESIG-----QVASQTMQSLAATNDVCTMPVYRPLIGFDKQEIV 330
Query: 182 KLAQDIGGQDLVNLILEES 200
+++ I + E+
Sbjct: 331 DVSEKIDTYETSIQPFEDC 349
>gi|94969297|ref|YP_591345.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Koribacter
versatilis Ellin345]
gi|189036216|sp|Q1IPC9|MNMA_ACIBL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|94551347|gb|ABF41271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Koribacter versatilis Ellin345]
Length = 370
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQR 45
+ K+ + + SGG DSST + + L+ + QR
Sbjct: 1 MNKSETIAVAMSGGVDSSTVAAMLRAEGYNLVGLTMQLWNQR 42
>gi|325971761|ref|YP_004247952.1| tRNA(Ile)-lysidine synthase [Spirochaeta sp. Buddy]
gi|324026999|gb|ADY13758.1| tRNA(Ile)-lysidine synthase [Spirochaeta sp. Buddy]
Length = 484
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 11/94 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMPKWKD 69
+ FSGG DS L AL + L Y Q + ELE + ++ + +
Sbjct: 29 VAFSGGSDSLALL-IALRKMYEPSFLHAMYVQHHLRPSNELEAETALNRENCQKLGVSL- 86
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
HIL L G ++H+ T+ ++ L
Sbjct: 87 -----HILDLGK-GSVAHAMQTRRGGVEEAARYL 114
>gi|307189324|gb|EFN73755.1| GMP synthase [glutamine-hydrolyzing] [Camponotus floridanus]
Length = 732
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
LLL SGG DS+ C + ++V L + G
Sbjct: 239 KKVLLLVSGGVDSTVCAALLQKALNKEQVIALHINNG 275
>gi|260886459|ref|ZP_05897722.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Selenomonas sputigena ATCC 35185]
gi|260863841|gb|EEX78341.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Selenomonas sputigena ATCC 35185]
Length = 344
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELMPKWKDSLG 72
SGG DSS C + ++ V ++ R + +++ + LG
Sbjct: 1 MSGGVDSSLCAALLQEQGYEVLGITMQLSDDSREMNGVSSAATDARRVADF-------LG 53
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFA--ATLAYRLGIT 129
+H++ A + + + PN + R FL F + A G
Sbjct: 54 IEHVV--ADFRTLFSDKVVDYFLTEYLTARTPNPCVICNR---FLKFGELLSFAKEKGAD 108
Query: 130 NIVIG 134
+ G
Sbjct: 109 FLATG 113
>gi|226943527|ref|YP_002798600.1| argininosuccinate synthase [Azotobacter vinelandii DJ]
gi|259585350|sp|C1DQV2|ASSY_AZOVD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|226718454|gb|ACO77625.1| Argininosuccinate synthase [Azotobacter vinelandii DJ]
Length = 406
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQALGVKEI 60
Query: 64 M 64
Sbjct: 61 F 61
>gi|326796169|ref|YP_004313989.1| Argininosuccinate synthase [Marinomonas mediterranea MMB-1]
gi|326546933|gb|ADZ92153.1| Argininosuccinate synthase [Marinomonas mediterranea MMB-1]
Length = 411
Score = 41.7 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W + + V T + D GQ +VE + E+
Sbjct: 1 MSDVKKVVLAYSGGLDTSVIVKWLQEEYQCEVVTFTADLGQGEEVEPARAKAQALGVNEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIEDLREEFVRDFVFPMFRANTIYEGEYLLGTSIA 95
>gi|15604175|ref|NP_220690.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia prowazekii str.
Madrid E]
gi|6226259|sp|Q9ZDM1|MNMA_RICPR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|3860867|emb|CAA14767.1| unknown [Rickettsia prowazekii]
gi|292571906|gb|ADE29821.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsia prowazekii Rp22]
Length = 358
Score = 41.7 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 64/191 (33%), Gaps = 25/191 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V ++ +DYG V + C + I +
Sbjct: 5 VVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDYG--IAVGKKNACCAGQDIYDAKMVAN 62
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----NTFVPGRNIIFLVFAATLAY 124
++L S + + + LP N V R++I A
Sbjct: 63 KLGIPHYVLDYENKFKESVIDNFVDSYLH-GETPLPCVQCNKSVKFRDLI------NTAK 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMWLKK 177
LG + G +GY + ++T + E + PL K
Sbjct: 116 ELGADKLATGHYVRKINGY--NGAELHTGLDTTKDQSYFLFTITREQLEYLSFPLGGFTK 173
Query: 178 YETWKLAQDIG 188
YET KLA G
Sbjct: 174 YETRKLASKFG 184
>gi|323498632|ref|ZP_08103624.1| tRNA s(4)U8 sulfurtransferase [Vibrio sinaloensis DSM 21326]
gi|323316330|gb|EGA69349.1| tRNA s(4)U8 sulfurtransferase [Vibrio sinaloensis DSM 21326]
Length = 482
Score = 41.7 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R +V F+ G K++
Sbjct: 173 PLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG------PAHEIGVKQVSHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + ++ + K+ D + + R +F+ A +A
Sbjct: 227 LWNKYGSSAKVRFISVDFEPVVA------EILEKVDDGQMG--VILKR--MFMRAAGMVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ I +V G S + + ++ + + PL+ K + L
Sbjct: 277 SKFKIEALVTGEALGQVSS---------QTLTNLRHIDNVTDTLILRPLINWDKEDIINL 327
Query: 184 AQDIGGQDL 192
A+DIG +D
Sbjct: 328 ARDIGTEDF 336
>gi|255073925|ref|XP_002500637.1| predicted protein [Micromonas sp. RCC299]
gi|226515900|gb|ACO61895.1| predicted protein [Micromonas sp. RCC299]
Length = 204
Score = 41.7 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECR 53
+DI++ A +L SGG DS L ++ + L F++G+R + E
Sbjct: 14 HDIVRHADRVVLCVSGGVDSVALLHLMVELRQEWALDLHILHFNHGKRAESREEEA 69
>gi|262306089|gb|ACY45637.1| gln amidotransferase [Peripatus sp. 'Pep']
Length = 197
Score = 41.7 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
K L+L SGG DS+ C + AL R +V + D G K E E KI
Sbjct: 42 KDNKVLMLVSGGVDSTVCAALLHKALKR-HQVIAVHIDNGFMRKKESEQVENSLNKI 97
>gi|260589079|ref|ZP_05854992.1| thiamine biosynthesis/tRNA modification protein ThiI [Blautia
hansenii DSM 20583]
gi|331082509|ref|ZP_08331634.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540499|gb|EEX21068.1| thiamine biosynthesis/tRNA modification protein ThiI [Blautia
hansenii DSM 20583]
gi|330400487|gb|EGG80117.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 392
Score = 41.7 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 63/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ SA+LL SGG DS R ++ + F + +K +
Sbjct: 175 PLGTNGSAMLLLSGGIDSPVAGYMIAKRGVTLDAVYF-----HAPPYTSERAKQKVVDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ K+ + + I I + + + ++ + A
Sbjct: 230 KLVAKYSGPIRLHVVNFTDIQLYIYDKCPHEELTIIMRRY-------------MMKIAEE 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + G ++ G + TI ++ ++ + V P++ K E
Sbjct: 277 FAKKDGCLGLITGESIGQVAS------QTIHSLAATNDVCT---MPVFRPVIGFDKQEIV 327
Query: 182 KLAQDIGGQDLVNLILEES 200
+A I + L E+
Sbjct: 328 DVALKINTYETSILPYEDC 346
>gi|56965845|ref|YP_177579.1| hypothetical protein ABC4087 [Bacillus clausii KSM-K16]
gi|56912091|dbj|BAD66618.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 430
Score = 41.7 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 70/247 (28%), Gaps = 53/247 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDS 70
+ +FSGG DS LD +TL YG K I E ++
Sbjct: 147 VCMFSGGLDSFIGAIELLDDTSENDTLFVSHYGG------------GKGIKEYQDILREE 194
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG--I 128
L + L + S+ R+ +F A LA + +
Sbjct: 195 LISKYQLTESNFYSFYASAKNGVEDTTRT-----------RSFMFFSHAVVLASSVDRPV 243
Query: 129 TNIV----------------IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
++ +G T + +P ++ + ++ V + P
Sbjct: 244 NLVIPENGLISLNIPLTNSRLGSSST-RTTHP-----FYLSLFQKLLDNLKIMVKILNPY 297
Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGK--RDKRYEWGYGCNSCPACYLRQKG 230
+ K E + I + + + + +C R C C C +R+
Sbjct: 298 QFKTKGEMIRECSSI---EFLQKNITNTMSCSHPDWGRWAGESEVCHCGYCLPCVIRRSA 354
Query: 231 WMEFKEK 237
+
Sbjct: 355 IKNAGIQ 361
>gi|110833586|ref|YP_692445.1| argininosuccinate synthase [Alcanivorax borkumensis SK2]
gi|119361256|sp|Q0VRM5|ASSY_ALCBS RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|110646697|emb|CAL16173.1| argininosuccinate synthase [Alcanivorax borkumensis SK2]
Length = 407
Score = 41.7 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S + W D +D V T + D GQ +VE + E+
Sbjct: 1 MSKINKVVLAYSGGLDTSVIVKWLQDTYDCEVVTFTADIGQGEEVEPARAKAEAMGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 YIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIA 95
>gi|253996737|ref|YP_003048801.1| argininosuccinate synthase [Methylotenera mobilis JLW8]
gi|253983416|gb|ACT48274.1| argininosuccinate synthase [Methylotenera mobilis JLW8]
Length = 406
Score = 41.7 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ ++E + E+
Sbjct: 1 MSNVNKVVLAYSGGLDTSVILKWLQDEYKCEVVTYTADLGQGEELEPARAKAKAAGVKEI 60
Query: 64 M 64
Sbjct: 61 F 61
>gi|254786948|ref|YP_003074377.1| argininosuccinate synthase [Teredinibacter turnerae T7901]
gi|237684351|gb|ACR11615.1| argininosuccinate synthase [Teredinibacter turnerae T7901]
Length = 411
Score = 41.7 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
M+ +L +SGG D+S + W + + V T + + GQ +VE
Sbjct: 1 MSAENSSIKKVVLAYSGGLDTSVIVKWLQETYQCEVVTFTANIGQGEEVEPARAKAQAMG 60
Query: 60 IVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ E+ + ++ D++ P+ I ++
Sbjct: 61 VKEIYIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIA 99
>gi|256371277|ref|YP_003109101.1| GMP synthase, large subunit [Acidimicrobium ferrooxidans DSM 10331]
gi|256007861|gb|ACU53428.1| GMP synthase, large subunit [Acidimicrobium ferrooxidans DSM 10331]
Length = 517
Score = 41.7 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 32/189 (16%)
Query: 10 SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ SGG DS+ + A DR+ + D G E E + + ++
Sbjct: 223 RAICALSGGVDSTVAAALTAEAIGDRLTCVFVDTGLLRSGEAEQVEHLFRSQFDIELIVV 282
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D+ ++ + + I + + IF AA+ +
Sbjct: 283 DAADR-------FFDALAGVTDPEAKRKIIGELFIR---------IFEETAAS---KTNA 323
Query: 129 TNIVIGVCETDYSGYPD----CRH--DTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
T++V G + YPD TI++ L + T+ PL L K E +
Sbjct: 324 THLVQG------TLYPDIVESGSDGSATIKSHHNVGGLPDDVAFTIVEPLRRLFKDEVRR 377
Query: 183 LAQDIGGQD 191
+ ++G +
Sbjct: 378 IGVELGIPE 386
>gi|172040791|ref|YP_001800505.1| argininosuccinate synthase [Corynebacterium urealyticum DSM 7109]
gi|229889873|sp|B1VH30|ASSY_CORU7 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|171852095|emb|CAQ05071.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 399
Score = 41.7 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQ 44
+L +SGG D++ +SW A +R V +S D GQ
Sbjct: 1 MKDRVVLAYSGGLDTTVAISWIAKERNAEVIAVSIDLGQ 39
>gi|325661222|ref|ZP_08149849.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472729|gb|EGC75940.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
4_1_37FAA]
Length = 357
Score = 41.7 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVT 33
>gi|300087159|ref|YP_003757681.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299526892|gb|ADJ25360.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 359
Score = 41.7 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
L+ SGG DS+ + A + V +
Sbjct: 1 MREKILVALSGGVDSAVAAALAQESGYDVTGI 32
>gi|299147036|ref|ZP_07040103.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 3_1_23]
gi|298514921|gb|EFI38803.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 3_1_23]
Length = 384
Score = 41.7 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE--LECRLCVRKKIV 61
+++ LL SGG DSS L+ V ++F Y E + R + +
Sbjct: 1 MEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERLGI 60
Query: 62 ELMPKWKDSLGEDHILP 78
+ + I+
Sbjct: 61 RHITYDAREIFNKQIID 77
>gi|260580728|ref|ZP_05848554.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
influenzae RdAW]
gi|260092545|gb|EEW76482.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
influenzae RdAW]
Length = 485
Score = 41.7 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-TVHEIGVKQMAYH----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + + V V R + + A+ +A
Sbjct: 227 --IWQRYSSSHKVRFIAINFEGVVGEILEKVDNGQMG------VVLKR--MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFNIEAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|254468139|ref|ZP_05081545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [beta
proteobacterium KB13]
gi|207086949|gb|EDZ64232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [beta
proteobacterium KB13]
Length = 364
Score = 41.7 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 44/149 (29%), Gaps = 38/149 (25%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K + ++ SGG DS+ + V L K
Sbjct: 2 KKKNIIVGLSGGVDSAVTAHILKQQGHNVRGLFM-----------------KNWEADDDD 44
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-------NNLPNTFVPGRNII----- 114
S +D I +++ I N A + ++ + L F P +I+
Sbjct: 45 EYCSSKQDLIDAISVAEKIGIDIEVVNFAKEYKEKVFNLFIDGLKKGFTPNPDILCNSEI 104
Query: 115 ----FLVFAATLAYRLGITNIVIGVCETD 139
FL A +LG +I G D
Sbjct: 105 KFEAFLN----HAMQLGADHIATG-HYAD 128
>gi|262306001|gb|ACY45593.1| gln amidotransferase [Aphonopelma chalcodes]
Length = 197
Score = 41.7 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V + D G
Sbjct: 43 NSKVLMLVSGGVDSTVCAALLHRALQADQVIAIHIDNG 80
>gi|224369845|ref|YP_002604009.1| argininosuccinate synthase [Desulfobacterium autotrophicum HRM2]
gi|223692562|gb|ACN15845.1| ArgG [Desulfobacterium autotrophicum HRM2]
Length = 403
Score = 41.7 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVE 62
+ +L +SGG D+S L W ++ + V TL+ D GQ +++ LE + +
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLIETYHCEVVTLTADLGQEEELDGLEAKALKTGAVKA 60
Query: 63 LMPKWKDSLGEDHILP 78
+ ++ D++ P
Sbjct: 61 YVEDLREEFIRDYVFP 76
>gi|152990743|ref|YP_001356465.1| argininosuccinate synthase [Nitratiruptor sp. SB155-2]
gi|166220999|sp|A6Q3P9|ASSY_NITSB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|151422604|dbj|BAF70108.1| argininosuccinate synthase [Nitratiruptor sp. SB155-2]
Length = 405
Score = 41.7 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ KK +L +SGG D+S L W + + V T + D GQ +VE R K ++
Sbjct: 1 MTKKVNKVVLAYSGGLDTSVILKWLQETYNCEVVTFTADIGQGEEVE-PAREKALKLGIK 59
Query: 63 LMPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 60 PENIFIEDLKEEFVRD 75
>gi|120436453|ref|YP_862139.1| argininosuccinate synthase [Gramella forsetii KT0803]
gi|117578603|emb|CAL67072.1| argininosuccinate synthase [Gramella forsetii KT0803]
Length = 395
Score = 41.7 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 9 PSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ +SGG D+S C + + V +S + G ++ E++ KKI K
Sbjct: 2 KKVVIAYSGGLDTSYCAKYLSEEEKFEVHAVSVNTGGFSEEEIKNIGENAKKIGATSYKN 61
Query: 68 KDSLGE--DHILPLAILGDISHSSL---TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
D++ ++ I G++ + + + IQ + N
Sbjct: 62 IDAVTSFYQKVVKYLIFGNVLKNDTYPLSVSAERIIQAIEIVN----------------Y 105
Query: 123 AYRLGITNIVIG 134
A ++G I G
Sbjct: 106 AKKIGAGYIAHG 117
>gi|302667536|ref|XP_003025350.1| hypothetical protein TRV_00473 [Trichophyton verrucosum HKI 0517]
gi|291189457|gb|EFE44739.1| hypothetical protein TRV_00473 [Trichophyton verrucosum HKI 0517]
Length = 80
Score = 41.7 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ + LL +SGG D+S L+W L++ V D GQ + E + KK+V
Sbjct: 1 MAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQAEDFKEAERKALAVGAKKLV 60
>gi|257065999|ref|YP_003152255.1| argininosuccinate synthase [Anaerococcus prevotii DSM 20548]
gi|256797879|gb|ACV28534.1| argininosuccinate synthase [Anaerococcus prevotii DSM 20548]
Length = 410
Score = 41.7 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
I+K+A +L +SGG D+S +W L++ V +S D GQ
Sbjct: 7 QILKEAKKVILAYSGGLDTSVLTTWLLEKGVGEVVCVSVDLGQ 49
>gi|225376291|ref|ZP_03753512.1| hypothetical protein ROSEINA2194_01929 [Roseburia inulinivorans
DSM 16841]
gi|225211937|gb|EEG94291.1| hypothetical protein ROSEINA2194_01929 [Roseburia inulinivorans
DSM 16841]
Length = 358
Score = 41.7 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
A ++ SGG DSS + V ++
Sbjct: 1 MAKKVVVGMSGGVDSSVAAYLLKKQGYDVIGVT 33
>gi|187780204|ref|ZP_02996677.1| hypothetical protein CLOSPO_03800 [Clostridium sporogenes ATCC
15579]
gi|187773829|gb|EDU37631.1| hypothetical protein CLOSPO_03800 [Clostridium sporogenes ATCC
15579]
Length = 359
Score = 41.7 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS ++ V ++
Sbjct: 5 KKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVT 36
>gi|82702172|ref|YP_411738.1| argininosuccinate synthase [Nitrosospira multiformis ATCC 25196]
gi|119361297|sp|Q2YA75|ASSY_NITMU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|82410237|gb|ABB74346.1| argininosuccinate synthase [Nitrosospira multiformis ATCC 25196]
Length = 407
Score = 41.7 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
MN + + +L FSGG D+S L W D + V T + D GQ +VE +
Sbjct: 1 MN--VAQIKKVVLAFSGGLDTSVILKWLQDTYRCEVVTFTADIGQGEEVEPARAKAKQLG 58
Query: 60 IVELM 64
+ E+
Sbjct: 59 VREIF 63
>gi|76803253|ref|YP_331348.1| argininosuccinate synthase [Natronomonas pharaonis DSM 2160]
gi|119361295|sp|Q3IME2|ASSY_NATPD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|76559118|emb|CAI50717.1| argininosuccinate synthase [Natronomonas pharaonis DSM 2160]
Length = 400
Score = 41.7 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQ-----RNKVELECRLCVR 57
+ L FSGG D++ C+ + +D V ++ D GQ + E L +
Sbjct: 1 MSDKNRVALAFSGGLDTTVCVPLLEEEYGYDEVIGVTVDVGQPEAEFKEAEETAEALDLE 60
Query: 58 KKIVELMPKWKD 69
+V+ P++ +
Sbjct: 61 HHVVDAKPEFAE 72
>gi|311897503|dbj|BAJ29911.1| hypothetical protein KSE_41230 [Kitasatospora setae KM-6054]
Length = 523
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 29/85 (34%), Gaps = 8/85 (9%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE---LECRLCVRKKIVELMPKWKDSL 71
SGG DSST A F Y + + E L+ V + + + +
Sbjct: 174 LSGGLDSSTLAVLAARHGPVT---GFTYHPKGRDEGGDLDHARAVARAVPRIRHRLMALG 230
Query: 72 GEDHILPLAILGDISHSSLTKNVAM 96
E LP A G + + AM
Sbjct: 231 PEH--LPFAGPGTLPPTDEPAPSAM 253
>gi|332025647|gb|EGI65809.1| GMP synthase [Acromyrmex echinatior]
Length = 716
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYG 43
LLL SGG DS+ C + ++V L + G
Sbjct: 239 KKVLLLVSGGVDSTVCAALLQKALSKEQVIALHINNG 275
>gi|315635921|ref|ZP_07891183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arcobacter butzleri JV22]
gi|315479900|gb|EFU70571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arcobacter butzleri JV22]
Length = 345
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 6/75 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DSS + VE + R E L + + + +
Sbjct: 2 SKKKVMVGMSGGIDSSVTAYMLQNEGYEVEGIYLKLHNRTDGYHEKNLGYIEDVAKFLNI 61
Query: 67 WKDSLGEDHILPLAI 81
+ HIL LA
Sbjct: 62 ------KYHILDLAD 70
>gi|302867888|ref|YP_003836525.1| asparagine synthase [Micromonospora aurantiaca ATCC 27029]
gi|302570747|gb|ADL46949.1| asparagine synthase (glutamine-hydrolyzing) [Micromonospora
aurantiaca ATCC 27029]
Length = 536
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 61/212 (28%), Gaps = 64/212 (30%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF--------DYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS L A + ++ Y +R L L V +++EL
Sbjct: 232 VVLSGGLDSSLALLHARELHPDCVAVTIGVPESPDVAYARR----LAADLGVPHEVIELR 287
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLA 123
P+ + ++ L + VP R +
Sbjct: 288 PRDIRLADVREAIRVSELTEYGDIINA-------------VVSVPIFRRL---------- 324
Query: 124 YRLGITNIVIGVCETD-YSGYPD--------------------CRHDTIRAIETAINLGM 162
LG+ ++ G + + GYP CR + ++ M
Sbjct: 325 RELGVRVVLTGDGSDELFGGYPMYHRVGPERSRRLFLHKIRNLCRTE----LQRVDRASM 380
Query: 163 ESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
V P + L +LA + +
Sbjct: 381 AHGVEARVPFLDLS---VVELAMRLPLDVKLR 409
>gi|269217070|ref|ZP_06160924.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Slackia exigua ATCC 700122]
gi|269129207|gb|EEZ60292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Slackia exigua ATCC 700122]
Length = 362
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 37/137 (27%), Gaps = 15/137 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-----DYGQRNKVELECRLCVRKKIV 61
++ SGG DSS + V + D R+ R C V
Sbjct: 1 MTKRVMVGMSGGVDSSVTAYVLKQQGYEVIGATMRLHGSDLPGRDARSCASRTCCSLDDV 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLV 117
E LG H D ++ K + PN P R + F
Sbjct: 61 EDAKSVARRLGIAHR--TIDFTDRFEDAVIKPFVRAYETARTPN---PCIDCNRRLKFGS 115
Query: 118 FAATLAYRLGITNIVIG 134
A LG + G
Sbjct: 116 M-LERALDLGCDYVATG 131
>gi|238580364|ref|XP_002389263.1| hypothetical protein MPER_11632 [Moniliophthora perniciosa FA553]
gi|215451338|gb|EEB90193.1| hypothetical protein MPER_11632 [Moniliophthora perniciosa FA553]
Length = 63
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K+ LL +SGG D+S L+W +++ V D GQ E + +K +
Sbjct: 1 MSAKSGRVLLAYSGGLDTSCILAWLIEQGYEVYVFMADVGQ----EEDFAAAEKKALKVG 56
Query: 64 MPKW 67
K+
Sbjct: 57 AKKF 60
>gi|254429426|ref|ZP_05043133.1| argininosuccinate synthase [Alcanivorax sp. DG881]
gi|196195595|gb|EDX90554.1| argininosuccinate synthase [Alcanivorax sp. DG881]
Length = 407
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S + W D +D V T + D GQ +VE + E+
Sbjct: 1 MSKINKVVLAYSGGLDTSVIVKWLQDTYDCEVVTFTADIGQGEEVEPARAKAEAMGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 YIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIA 95
>gi|156936928|ref|YP_001434724.1| hypothetical protein Igni_0133 [Ignicoccus hospitalis KIN4/I]
gi|156565912|gb|ABU81317.1| phosphoadenosine phosphosulfate reductase [Ignicoccus hospitalis
KIN4/I]
Length = 421
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-----YGQRNKVEL 50
+ +++ A++ +SGG+DS+ L A D V + D Y R VEL
Sbjct: 217 SKVLEGCERAVVPWSGGKDSTAALLIAKRACDEVTAVYVDTGVDMYLNRKYVEL 270
>gi|123969022|ref|YP_001009880.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
AS9601]
gi|205816921|sp|A2BSL2|MNMA_PROMS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|123199132|gb|ABM70773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prochlorococcus marinus str. AS9601]
Length = 385
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 43/203 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS + ++R VE L+ GQ C + +V+ +D
Sbjct: 27 IVGLSGGVDSSLSAALLVERGWNVEGLTLWLMKGQ--------GSCCSEGLVDAAGLCED 78
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIF---LVFAATL 122
I+ +I + K + P +P +N+ F L +A +
Sbjct: 79 LGINHKIIDS---REIFEREVIKKTTESYEKGFTP---LPCSMCNKNVKFEEMLNYAIS- 131
Query: 123 AYRLGITNIVIG----VCETDYSGYPDCR----HDTI-------RAIETAINLGMESHV- 166
+ T+I G + ++ Y+ DC+ + + ++ + V
Sbjct: 132 --KKDFTHIATGHYARINKSSYATTLDCKNLVFKEFLLLRGADENKDQSYFLYSLSQEVL 189
Query: 167 -TVHTPLMWLKKYETWKLAQDIG 188
+ PL +KK +T + A +G
Sbjct: 190 SRLEFPLGEMKKEDTRREALRLG 212
>gi|161485685|ref|NP_632061.2| argininosuccinate synthase [Methanosarcina mazei Go1]
gi|24211497|sp|Q8Q0U5|ASSY_METMA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
Length = 394
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIV--E 62
L +SGG D+S C+ ++ +D V T+S D GQ + E+ +KI
Sbjct: 1 MVKKVALAYSGGLDTSVCIPILKEKYGYDEVITISVDVGQ-PEEEIRKADAKAQKISNKH 59
Query: 63 LMPKWKDSLGEDHILPL 79
K+ D+I PL
Sbjct: 60 YTIDAKEEFVRDYIFPL 76
>gi|109898694|ref|YP_661949.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas atlantica T6c]
gi|122971887|sp|Q15T93|MNMA_PSEA6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|109700975|gb|ABG40895.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas atlantica T6c]
Length = 396
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 24/139 (17%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELM 64
++ SGG DSS L + +VE L +N E + C ++
Sbjct: 34 NSQKKVIVGMSGGVDSSVSAYILLQQGYQVEGLFM----KNWEEDDNDEYCAAADDLKDA 89
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---------F 115
D LG +L I+ ++ + + + P +I+ F
Sbjct: 90 QAVADKLGI-------VLHQINFAAEYWDNVFEYFLEEYKSGRTPNPDIMCNKEIKFKAF 142
Query: 116 LVFAATLAYRLGITNIVIG 134
L FA A L I G
Sbjct: 143 LEFA---AEELEADYIATG 158
>gi|317058631|ref|ZP_07923116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_5R]
gi|313684307|gb|EFS21142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_5R]
Length = 332
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKVVQEQGIEVIALNF 35
>gi|296327469|ref|ZP_06870015.1| ThiI family protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296155295|gb|EFG96066.1| ThiI family protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 333
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKVVQEQGIEVIALNF 35
>gi|260494762|ref|ZP_05814892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_33]
gi|260197924|gb|EEW95441.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_33]
Length = 333
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKVVQEQGIEVIALNF 35
>gi|257466119|ref|ZP_05630430.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium gonidiaformans ATCC 25563]
gi|315917276|ref|ZP_07913516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium gonidiaformans ATCC 25563]
gi|313691151|gb|EFS27986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium gonidiaformans ATCC 25563]
Length = 332
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKVVQEQGIEVIALNF 35
>gi|257452082|ref|ZP_05617381.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. 3_1_5R]
Length = 333
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 6 KALALFSGGLDSALAIKVVQEQGIEVIALNF 36
>gi|256844917|ref|ZP_05550375.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_36A2]
gi|256718476|gb|EEU32031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_36A2]
Length = 333
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKVVQEQGIEVIALNF 35
>gi|256026888|ref|ZP_05440722.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. D11]
Length = 332
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKVVQEQGIEVIALNF 35
>gi|253580715|ref|ZP_04857979.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848086|gb|EES76052.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 393
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 62/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I A+LL SGG DS R +++ + F + ++K+V+L
Sbjct: 176 PIGTNGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYF-----HAPPYTSE-RAKQKVVDL 229
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ G H++ + + + I + A
Sbjct: 230 AKQVAKYSGPIRLHVINFTDIQLYIYDQCPHDELTIIMRRY------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A ++ G + T++++ + + V+ P++ K E
Sbjct: 278 FAKESRCLGLITGESIGQVAS------QTLQSLAATNEVCT---LPVYRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+ + +IG + E+
Sbjct: 329 ERSWEIGTYETSIQPFEDC 347
>gi|237744985|ref|ZP_04575466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 7_1]
gi|229432214|gb|EEO42426.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 7_1]
Length = 333
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKVVQEQGIEVIALNF 35
>gi|237741595|ref|ZP_04572076.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 4_1_13]
gi|294785797|ref|ZP_06751085.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. 3_1_27]
gi|229429243|gb|EEO39455.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 4_1_13]
gi|294487511|gb|EFG34873.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. 3_1_27]
Length = 333
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKVVQEQGIEVIALNF 35
>gi|228473347|ref|ZP_04058101.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga gingivalis ATCC 33624]
gi|228275249|gb|EEK14047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga gingivalis ATCC 33624]
Length = 397
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLQKQGYEVIGL 31
>gi|167043840|gb|ABZ08529.1| putative PP-loop family protein [uncultured marine crenarchaeote
HF4000_APKG3E18]
Length = 268
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ L+ SGG DS+ A + ++ DY + ELE + +I
Sbjct: 16 KNTVLVALSGGVDSALVAYSAYAKLGKSAIAVTADYKTLAQEELEYAKKISLEI 69
>gi|19703898|ref|NP_603460.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19714062|gb|AAL94759.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
-methyltransferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 333
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS+ + ++ V L+F
Sbjct: 5 KALALFSGGLDSALAIKVVQEQGIEVIALNF 35
>gi|260172511|ref|ZP_05758923.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides sp. D2]
Length = 385
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
++++ LL SGG DSS L+ V ++F Y E LE + +++
Sbjct: 1 MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERL 59
>gi|237720472|ref|ZP_04550953.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 2_2_4]
gi|293368878|ref|ZP_06615481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides ovatus SD CMC 3f]
gi|229450223|gb|EEO56014.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 2_2_4]
gi|292636027|gb|EFF54516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides ovatus SD CMC 3f]
Length = 385
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
++++ LL SGG DSS L+ V ++F Y E LE + +++
Sbjct: 1 MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERL 59
>gi|257051599|ref|YP_003129432.1| thiamine biosynthesis protein [Halorhabdus utahensis DSM 12940]
gi|256690362|gb|ACV10699.1| thiamine biosynthesis protein [Halorhabdus utahensis DSM 12940]
Length = 407
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 54/200 (27%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSF---DYG---QRNKVELECRLCVRKKIVELMP 65
+ L SGG DS + R V + DYG R + E R+ P
Sbjct: 191 VALISGGIDSPVAAWQVMTRGAPVVPVYVDLGDYGGVDHRARAETTVAALARR-----AP 245
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF------A 119
+ L +L ++ + VA L A
Sbjct: 246 NFDLRL---RVLD-------GGKAVEELVAETDDTR-------------MLSLRRFMYRA 282
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLK 176
A + + +G+ + G ++ +T N+ VT +H PL+ +
Sbjct: 283 ---AETVAREHDAVGIVSGEAIG--------QKSSQTTANIAATDGVTDLPIHRPLLTMD 331
Query: 177 KYETWKLAQDIGGQDLVNLI 196
K + + A+D+ D +
Sbjct: 332 KTDIIEAARDLETYDDATVP 351
>gi|156361200|ref|XP_001625407.1| predicted protein [Nematostella vectensis]
gi|156212239|gb|EDO33307.1| predicted protein [Nematostella vectensis]
Length = 401
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ +L +SGG D+S L W ++ V D GQ + E KK+ +
Sbjct: 7 RKTCVLAYSGGLDTSCILVWLQEQGYDVIAYLADIGQ--TEDFEAAREKAKKLGA-KKVY 63
Query: 68 KDSLGEDHILPLAI 81
+ L E+ +
Sbjct: 64 IEDLKEEFVTDFIF 77
>gi|160883986|ref|ZP_02064989.1| hypothetical protein BACOVA_01960 [Bacteroides ovatus ATCC 8483]
gi|156110716|gb|EDO12461.1| hypothetical protein BACOVA_01960 [Bacteroides ovatus ATCC 8483]
Length = 378
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
++++ LL SGG DSS L+ V ++F Y E LE + +++
Sbjct: 1 MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERL 59
>gi|305664217|ref|YP_003860505.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230]
gi|304378786|gb|ADM28625.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230]
Length = 298
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 61/203 (30%), Gaps = 48/203 (23%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ I++ +++FSGG DS+ A D + ++ D + E+ + + K I
Sbjct: 27 EAIREKEKIVVMFSGGVDSTLLAKLAYDVLGNNAIAVTIDSPVIPRSEIRDAIQIAKLIG 86
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + L + + + R+
Sbjct: 87 ----------IRHEVIEIDELRNKYLVENPPDRCYLCRK---------FRD----AIVKN 123
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL--KKYE 179
A R+G + G+ TD Y R + E I P + K E
Sbjct: 124 WAKRIGFDVVADGLHYTDLEDY---RPGIAASTEDGIWH----------PFIEFQVTKDE 170
Query: 180 TWKLAQDIGGQDLVNLILEESHT 202
+ ++ +G + +
Sbjct: 171 IREYSRLLGLP---------TWS 184
>gi|238924262|ref|YP_002937778.1| thiamine biosynthesis ATP pyrophosphatase [Eubacterium rectale ATCC
33656]
gi|259518559|sp|C4ZAY9|THII_EUBR3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|238875937|gb|ACR75644.1| thiamine biosynthesis ATP pyrophosphatase [Eubacterium rectale ATCC
33656]
gi|291525038|emb|CBK90625.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
rectale DSM 17629]
gi|291529133|emb|CBK94719.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
rectale M104/1]
Length = 394
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 31/200 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKI 60
+ A A+LL SGG DS R + F Y ++ + + + KK+
Sbjct: 175 PLGTAGKAMLLLSGGIDSPVAGYMIAKRGVVINATYFHAPPY--TSERAKQKVVDLAKKV 232
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ K + + LAI H LT II +
Sbjct: 233 ARYSGRIKLHVVNFTDIQLAIYEKCPHDELT---------------------IIMRRYMM 271
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+A + +G+ + G + +++ H+ V+ PL+ + K +
Sbjct: 272 KIAEHFADEDKCLGLITGESIG-----QVASQTMQSLAATNEVCHMPVYRPLIAMDKNDI 326
Query: 181 WKLAQDIGGQDLVNLILEES 200
++ I + L E+
Sbjct: 327 IDISNKIDTYETSILPYEDC 346
>gi|150025823|ref|YP_001296649.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Flavobacterium psychrophilum JIP02/86]
gi|205816862|sp|A6H0G9|MNMA_FLAPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|149772364|emb|CAL43842.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Flavobacterium psychrophilum JIP02/86]
Length = 395
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLQEQGYEVIGL 31
>gi|119945887|ref|YP_943567.1| thiamine biosynthesis protein ThiI [Psychromonas ingrahamii 37]
gi|189030641|sp|A1SWV3|THII_PSYIN RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|119864491|gb|ABM03968.1| sulfur transferase ThiI [Psychromonas ingrahamii 37]
Length = 484
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVE 62
+ S L L SGG DS + R RV F+ G +++ + +
Sbjct: 175 PLGTQESVLSLISGGFDSGVSSYKLIKRGSRVHYCFFNLGGGAHEI----------GVKQ 224
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + + G H + I + + K+++ + V R + + A +
Sbjct: 225 VAYQLWNRFGSSHRVK---FISIPFEPVVAEILEKVENGQMG--VVLKR--MMMRAATLM 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A RLG+ ++ G S + + + S + + PL+ K +
Sbjct: 278 AERLGVEALITGEALGQVSS---------QTLRNLSVIDKVSDMLILRPLIATDKQDIVD 328
Query: 183 LAQDIGGQDLVNLILEES 200
A+ IG ++ I E
Sbjct: 329 CARVIGTAEISETIPEYC 346
>gi|108805594|ref|YP_645531.1| thiamine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
gi|108766837|gb|ABG05719.1| thiamine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
Length = 502
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 74/192 (38%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL LFSGG DS + R RV+ + +D G ++ L V + EL +W
Sbjct: 195 RALALFSGGFDSPVAAWRVMRRGIRVDLVVYDLG--GCGQVGQALAVAR---ELALRWAP 249
Query: 70 SLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L +++ LA + S+L + V +++ L + LA LG
Sbjct: 250 GLEVRANVVDLAPV----VSALVRRVDPRLRQILLKRA--------MYRAGSILAGELGF 297
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+V G S T+R + A V V PL+ K E + A+ IG
Sbjct: 298 EALVTGESLGQVST------QTLRNLAVAEEAAS---VPVLRPLVGSDKQEIIEAARSIG 348
Query: 189 GQDLVNLILEES 200
D+ L+ E
Sbjct: 349 THDVSALVKEHC 360
>gi|331085021|ref|ZP_08334108.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408721|gb|EGG88186.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 357
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVT 33
>gi|328953724|ref|YP_004371058.1| tRNA-specific 2-thiouridylase mnmA [Desulfobacca acetoxidans DSM
11109]
gi|328454048|gb|AEB09877.1| tRNA-specific 2-thiouridylase mnmA [Desulfobacca acetoxidans DSM
11109]
Length = 351
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ A+ L SGG DS+ + L++ V+ +
Sbjct: 4 NRNRVAVAL-SGGLDSTVAAALLLNQGFEVQGVH 36
>gi|295705537|ref|YP_003598612.1| hypothetical protein BMD_3422 [Bacillus megaterium DSM 319]
gi|294803196|gb|ADF40262.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 269
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 18/98 (18%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFD---YGQRNKVELECRLC 55
+ I++ S ++ FSGG DS+ L A++ + V ++ D Y ELE
Sbjct: 9 LTSILRDMESVVVAFSGGVDSTFLLKVAVETLGNENVIAVTADSETYP---SSELEEAKV 65
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
+ ++I I+ + L +S KN
Sbjct: 66 LARQIG----------VRHQIIETSELAIPGYSENNKN 93
>gi|294500187|ref|YP_003563887.1| hypothetical protein BMQ_3431 [Bacillus megaterium QM B1551]
gi|294350124|gb|ADE70453.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 269
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 18/98 (18%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFD---YGQRNKVELECRLC 55
+ I++ S ++ FSGG DS+ L A++ + V ++ D Y ELE
Sbjct: 9 LTSILRDMESVVVAFSGGVDSTFLLKVAVETLGNENVIAVTADSETYP---SSELEEAKV 65
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
+ ++I I+ + L +S KN
Sbjct: 66 LARQIG----------VRHQIIETSELAIPGYSENNKN 93
>gi|329954114|ref|ZP_08295209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides clarus YIT 12056]
gi|328528091|gb|EGF55071.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides clarus YIT 12056]
Length = 350
Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 11/74 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVEL 63
+ LL SGG DSS + V ++F Y K E +E
Sbjct: 1 MNSKERVLLGMSGGTDSSVTAMKLQEAGYEVTGVTFRFYEADGKAEY----------LED 50
Query: 64 MPKWKDSLGEDHIL 77
D LG +HI+
Sbjct: 51 ARTLADRLGIEHII 64
>gi|325181184|emb|CCA15598.1| unnamed protein product [Albugo laibachii Nc14]
gi|325181887|emb|CCA16342.1| unnamed protein product [Albugo laibachii Nc14]
Length = 422
Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-----VELECRLC 55
M+ K +L +SGG D+S L W ++ V + GQ + E L
Sbjct: 1 MSVQAKSGEKVVLAYSGGLDTSIILKWLANKGFEVICYCANVGQHGEDYTKVKEKALALG 60
Query: 56 VRKKIVELMP 65
K +E +
Sbjct: 61 ATKVYIEDLR 70
>gi|238897773|ref|YP_002923452.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229465530|gb|ACQ67304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 364
Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
M++ K + ++ SGG DSS L++ +V L + + EL C V
Sbjct: 1 MSN--KNSKKVVVGMSGGVDSSVAAYLLLEQGYQVCGLFMKNWEEDDNELYCAAAV 54
>gi|163755895|ref|ZP_02163012.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Kordia algicida OT-1]
gi|161324066|gb|EDP95398.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Kordia algicida OT-1]
Length = 395
Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 46/148 (31%), Gaps = 20/148 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS ++ V L + V + + + M +
Sbjct: 2 KRVIVGLSGGVDSSVTAYLLKEQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDAMIVAE 61
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNI---IFLVFAATLAY 124
+ L+ + + + + + PN V R I +FL A
Sbjct: 62 KLGIPFQTVDLS---EQYKERIVDYMFNEYEKGRTPNPDVLCNREIKFDVFLKIAL---- 114
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIR 152
LG + G Y CR +TI
Sbjct: 115 DLGADYVATGH-------Y--CRKETIE 133
>gi|195952741|ref|YP_002121031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hydrogenobaculum sp. Y04AAS1]
gi|226704772|sp|B4U7E2|MNMA_HYDS0 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|195932353|gb|ACG57053.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hydrogenobaculum sp. Y04AAS1]
Length = 342
Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS ++ V ++ Y + + + R+C K V+ D LG
Sbjct: 7 MSGGVDSSVAAYLLKEQGHDVIGVTLRFY--KEECKENARVCCSPKDVQDARIVCDMLGI 64
Query: 74 DHI 76
HI
Sbjct: 65 PHI 67
>gi|33152814|ref|NP_874167.1| thiamine biosynthesis protein ThiI [Haemophilus ducreyi 35000HP]
gi|38372555|sp|Q7VKR6|THII_HAEDU RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|33149039|gb|AAP96556.1| thiamine biosynthesis protein ThiI [Haemophilus ducreyi 35000HP]
Length = 484
Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 62/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ +
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMFIRRGSRVHYCFFNLGG-ASHEIGVKQMAYH----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + S+ + K+ + + V R + + A+ +A
Sbjct: 227 --IWSRYSTSHKVRFVAINFE----SVVGEILEKVDNGQMG--VVLKR--MMVRAASQIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + L
Sbjct: 277 ERFAIQAIVTGEALGQVSS---------QTLTNLRLIDKAADSLVLRPLITHDKEKIIAL 327
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 328 AKQIGTDDI 336
>gi|315607452|ref|ZP_07882448.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
gi|315250884|gb|EFU30877.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
Length = 443
Score = 41.7 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 77/233 (33%), Gaps = 44/233 (18%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
LFSGG DS L A+D + G++ ++ L K ++ + +
Sbjct: 146 LFSGGMDS---LIGAIDYMESC-------GKQCQIYLASHHDSIMKGPKIDQERIITKFT 195
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
I + T + + + R+++FL A +A IV
Sbjct: 196 QQYPDKFIYRQPVGITPTISKELTCRS----------RSLMFLSIAFMVAAYKSCKVIVP 245
Query: 134 GVCETDYSGYP-------DCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ YP C +++I +++ + + P + K E
Sbjct: 246 -ENGSVSLNYPLSVSRRAACSTRTTHPLFLQSIRELLSVLSL-PIIIENPYEFRTKGEMV 303
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRD-----KRYEWGYGCNSCPACYLRQK 229
A + L++ I+++ ++C GKR C C C R+
Sbjct: 304 --ANCLNKSYLLD-IVDKCNSC--GKRGGHQFMPDNPHASHCGRCMPCMYRKA 351
>gi|254503485|ref|ZP_05115636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Labrenzia alexandrii DFL-11]
gi|222439556|gb|EEE46235.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Labrenzia alexandrii DFL-11]
Length = 449
Score = 41.7 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y V C I + +
Sbjct: 72 RVVVAMSGGVDSSVVAAMMHAEGYDVIGVTLQLYDHGAAVAKTKSCCAGVDIHDARRAAE 131
Query: 69 DSLGEDHILP 78
++L
Sbjct: 132 KIGIPHYVLD 141
>gi|296446642|ref|ZP_06888583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylosinus trichosporium OB3b]
gi|296255870|gb|EFH02956.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylosinus trichosporium OB3b]
Length = 411
Score = 41.7 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 7/101 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + ++ V ++ Y V + C + I +
Sbjct: 27 RVVVAMSGGVDSSVVAALLAEQGYDVVGVTLQLYDHGEAVHRKGSCCAGQDIHDARRVAA 86
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
++L ++ A P VP
Sbjct: 87 RLGIPHYVLD---FETRFRETVIDTFAQSYASGETP---VP 121
>gi|56750177|ref|YP_170878.1| hypothetical protein syc0168_c [Synechococcus elongatus PCC 6301]
gi|81300196|ref|YP_400404.1| hypothetical protein Synpcc7942_1387 [Synechococcus elongatus PCC
7942]
gi|56685136|dbj|BAD78358.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169077|gb|ABB57417.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 275
Score = 41.7 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 65/197 (32%), Gaps = 47/197 (23%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
+ ++ PSAL+ +SGG DSS A DR ++ + +
Sbjct: 9 VRSQLRSFPSALVAYSGGIDSSLVAYLAAQELGDRAIAVT----------AVSASLLPED 58
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIF 115
+ + + + L + +++S N ++ D P
Sbjct: 59 LEAARSQAEWMGIAHEQIQTDELANPNYASNPSNRCYFCKSELHDRLQP----------- 107
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW- 174
LA G ++ GV D D R ++ A G V +PL
Sbjct: 108 ------LAQSRGFAVVLDGVNADDLG---DHRPG----LQAAAERG------VRSPLAEA 148
Query: 175 -LKKYETWKLAQDIGGQ 190
+ K E +LA+++G
Sbjct: 149 GISKLEVRQLARELGMP 165
>gi|34497449|ref|NP_901664.1| argininosuccinate synthase [Chromobacterium violaceum ATCC 12472]
gi|44887696|sp|Q7NWJ5|ASSY_CHRVO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|34103304|gb|AAQ59666.1| argininosuccinate synthase [Chromobacterium violaceum ATCC 12472]
Length = 408
Score = 41.7 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W D + V T + D GQ +VE + V I
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDEYQCEVVTFTADIGQGEEVEPARQKAVSLGI 57
>gi|317495071|ref|ZP_07953443.1| tRNA methyl transferase [Gemella moribillum M424]
gi|316914843|gb|EFV36317.1| tRNA methyl transferase [Gemella moribillum M424]
Length = 370
Score = 41.7 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 19/137 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVEL 63
+ ++ SGG DSS + V + +N E + R CV +K E
Sbjct: 1 MSNGKKVVVGMSGGVDSSVTAYLLKQQGYDVIGVFM----KNWEEKDDRGGCVAEKDYED 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF------LV 117
+ K + L + + + + T + + + PN P I
Sbjct: 57 VIKVCEQLDIPYY-SINFEKEYWNKVFTYFLD-EYKKGRTPN---PD---IMCNKEIKFK 108
Query: 118 FAATLAYRLGITNIVIG 134
A LG + G
Sbjct: 109 VFLEYAEDLGADYVATG 125
>gi|299146811|ref|ZP_07039879.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_1_23]
gi|298517302|gb|EFI41183.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_1_23]
Length = 426
Score = 41.7 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 58/196 (29%), Gaps = 43/196 (21%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+ SGG DS L E ++ R K E + +++ E M
Sbjct: 20 DKILVALSGGADSVALLYILHTAGYHCEAAHCNFHLRGK-ESDRDELFVRQLCERMEIHL 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYRLG 127
H + + + K++++++ L + R
Sbjct: 79 ------HTIDFNT----TQYATEKHISIEMAARELRYQWFEKIR------------KECQ 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
+ + + D I I + G + T+ PL+ + +
Sbjct: 117 ADVVAVAHHQDDS----------IETILLNLIRGTGITGLLGIRPRNGTIVRPLLCINRK 166
Query: 179 ETWKLAQDIGGQDLVN 194
E + Q+IG + +
Sbjct: 167 EIIRYLQNIGQDYVTD 182
>gi|262306027|gb|ACY45606.1| gln amidotransferase [Craterostigmus tasmanianus]
Length = 197
Score = 41.7 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V L D G
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALKKDQVIALHIDNG 80
>gi|260853643|ref|YP_003227534.1| sulfurtransferase [Escherichia coli O26:H11 str. 11368]
gi|257752292|dbj|BAI23794.1| sulfurtransferase [Escherichia coli O26:H11 str. 11368]
Length = 482
Score = 41.7 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 58/192 (30%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R V
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVVHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|255994856|ref|ZP_05427991.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Eubacterium saphenum ATCC 49989]
gi|255993569|gb|EEU03658.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Eubacterium saphenum ATCC 49989]
Length = 351
Score = 41.7 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
N++I ++ SGG DS L + + D
Sbjct: 15 NELIDTQDKVVVGLSGGPDSVALLHCLNELGYDCIAVHID 54
>gi|154344038|ref|XP_001567963.1| thiamine biosynthesis-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065297|emb|CAM40725.1| thiamine biosynthesis-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 795
Score = 41.7 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 42/145 (28%), Gaps = 35/145 (24%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R V + F + + + ++I E
Sbjct: 219 PITPNQRVLALISGGIDSPVAAYRMMTRGCLVNGVHFL---NSTNDTASVMEKNRRICER 275
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNII----FLV 117
+ + ++ + I + VP R +I L
Sbjct: 276 LSSVQGRFDMHYVDISTLQSQIVAN-------------------VPNHNRTLIYKWFMLS 316
Query: 118 FAATLAYRLGITNIVIGVCETDYSG 142
AA + IV G D +G
Sbjct: 317 LAAGF---DDSSFIVTG----DSAG 334
>gi|66505538|ref|XP_396374.2| PREDICTED: argininosuccinate synthase-like [Apis mellifera]
Length = 412
Score = 41.7 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + +L +SGG D+S L W ++ +V + GQ + + + KI
Sbjct: 1 MSETEKKVVLAYSGGLDTSCILLWLKEKGYQVIAYMANVGQ--EEDFDAARKKALKIGA 57
>gi|298206785|ref|YP_003714964.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Croceibacter atlanticus HTCC2559]
gi|83849417|gb|EAP87285.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Croceibacter atlanticus HTCC2559]
Length = 396
Score = 41.7 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
S ++ SGG DSS ++ V L
Sbjct: 2 KSVVVGLSGGVDSSVSAYLLKEQGYEVIGL 31
>gi|77919454|ref|YP_357269.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pelobacter carbinolicus DSM 2380]
gi|123573968|sp|Q3A3F8|MNMA_PELCD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|77545537|gb|ABA89099.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pelobacter carbinolicus DSM 2380]
Length = 352
Score = 41.7 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +K L+ SGG DS+ + L + +V ++ E I +
Sbjct: 1 MKEKNKHILVAMSGGVDSTVAAALLLAQGHQVSGVTMR---VWDTEPLGDGREPAHIRDA 57
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LVFAATL 122
D H++ L + + + PN V N +F
Sbjct: 58 RKVAFDLGIPLHVVDL---REEFLQQVVTPFCEEYLSGRTPNPCVLC-NRVFKFSRLLRE 113
Query: 123 AYRLGITNIVIG 134
A RLG + G
Sbjct: 114 ADRLGADALATG 125
>gi|114319762|ref|YP_741445.1| argininosuccinate synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|119361257|sp|Q0AB32|ASSY_ALHEH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|114226156|gb|ABI55955.1| argininosuccinate synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 402
Score = 41.7 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + +D V T + D GQ ++E + I E+
Sbjct: 1 MSDVKKVVLAYSGGLDTSVILQWLRETYDCEVVTFTADLGQGEELEPARKKAEAFGIKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIDDLREEFVRDFVFPMFRANAIYEGEYLLGTSIA 95
>gi|296273128|ref|YP_003655759.1| thiamine biosynthesis/tRNA modification protein ThiI [Arcobacter
nitrofigilis DSM 7299]
gi|296097302|gb|ADG93252.1| thiamine biosynthesis/tRNA modification protein ThiI [Arcobacter
nitrofigilis DSM 7299]
Length = 490
Score = 41.7 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 29/179 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV--ELMPKWKD 69
L L SGG DS+ + R + + F+ G + +I ++ +
Sbjct: 191 LSLMSGGFDSTVASYLTMKRGIKTHFVFFNLG-----------GIAHEIGVKQVALYLWN 239
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
G H + I + + + + T R + L A +A L I
Sbjct: 240 KFGSSHRV---TFTSIPFDDVVTEIFRSTHETYMGVTL--KR--LMLKAAEKIANDLKID 292
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
++ G S + + + ++ V PL + K + +A +IG
Sbjct: 293 ALLTGESVAQVSS---------QTLRNLALIDQSTNKLVLRPLATMNKPDIIDIANEIG 342
>gi|315505707|ref|YP_004084594.1| asparagine synthase (glutamine-hydrolyzing) [Micromonospora sp. L5]
gi|315412326|gb|ADU10443.1| asparagine synthase (glutamine-hydrolyzing) [Micromonospora sp. L5]
Length = 536
Score = 41.7 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 61/212 (28%), Gaps = 64/212 (30%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF--------DYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS L A + ++ Y +R L L V +++EL
Sbjct: 232 VVLSGGLDSSLALLHARELHPDCVAVTIGVPESPDVAYARR----LAADLGVPHEVIELR 287
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLA 123
P+ + ++ L + VP R +
Sbjct: 288 PRDIRLADVREAIRVSELTEYGDIINA-------------VVSVPIFRRL---------- 324
Query: 124 YRLGITNIVIGVCETD-YSGYPD--------------------CRHDTIRAIETAINLGM 162
LG+ ++ G + + GYP CR + ++ M
Sbjct: 325 RELGVRVVLTGDGSDELFGGYPMYHRVGPERSRRLFLHKIRNLCRTE----LQRVDRASM 380
Query: 163 ESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
V P + L +LA + +
Sbjct: 381 AHGVEARVPFLDLS---VVELAMRLPLDVKLR 409
>gi|225849269|ref|YP_002729433.1| tRNA methyl transferase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644241|gb|ACN99291.1| tRNA methyl transferase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 349
Score = 41.7 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ L+SGG DS+ + ++ + + F
Sbjct: 1 MKRKAVALYSGGLDSTLAIRLIQNQGIDILAVHF 34
>gi|115974803|ref|XP_001180974.1| PREDICTED: similar to argininosuccinate synthetase, partial
[Strongylocentrotus purpuratus]
Length = 693
Score = 41.7 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
K +L +SGG D+S L W ++ V + D GQ
Sbjct: 8 KKGKVVLAYSGGLDTSCILVWLIEEGYDVVAYTADVGQ 45
>gi|115630519|ref|XP_789011.2| PREDICTED: similar to argininosuccinate synthetase, partial
[Strongylocentrotus purpuratus]
Length = 690
Score = 41.7 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
K +L +SGG D+S L W ++ V + D GQ
Sbjct: 8 KKGKVVLAYSGGLDTSCILVWLIEEGYDVVAYTADVGQ 45
>gi|257466420|ref|ZP_05630731.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium gonidiaformans ATCC 25563]
gi|315917577|ref|ZP_07913817.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium gonidiaformans ATCC 25563]
gi|313691452|gb|EFS28287.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium gonidiaformans ATCC 25563]
Length = 350
Score = 41.7 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 23/69 (33%), Gaps = 15/69 (21%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DSST + + ++ KK+ E LG
Sbjct: 17 VALSGGVDSSTVAYLLKKQGYDIFGVTM-------KTCHAEDADAKKVCE-------DLG 62
Query: 73 EDH-ILPLA 80
DH +L L
Sbjct: 63 IDHYVLDLT 71
>gi|257452558|ref|ZP_05617857.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. 3_1_5R]
gi|317059098|ref|ZP_07923583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_5R]
gi|313684774|gb|EFS21609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_5R]
Length = 350
Score = 41.7 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 23/69 (33%), Gaps = 15/69 (21%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DSST + + ++ KK+ E LG
Sbjct: 17 VALSGGVDSSTVAYLLKKQGYDIFGVTM-------KTCHAEDADAKKVCE-------DLG 62
Query: 73 EDH-ILPLA 80
DH +L L
Sbjct: 63 IDHYVLDLT 71
>gi|169832363|ref|YP_001718345.1| ExsB family protein [Candidatus Desulforudis audaxviator MP104C]
gi|169639207|gb|ACA60713.1| ExsB family protein [Candidatus Desulforudis audaxviator MP104C]
Length = 265
Score = 41.7 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
+ IIKK ++ SGG DS+T L A + +RV + G + +L+ +
Sbjct: 8 VRAIIKKLGGVVVALSGGVDSATVLCLAREVLGERVAAATAVAGIHARADLQRARALAAL 67
Query: 60 IVELMPKWKDSLGED 74
+ ++ D
Sbjct: 68 LGVRHLEFPGGQLAD 82
>gi|218263856|ref|ZP_03477825.1| hypothetical protein PRABACTJOHN_03515 [Parabacteroides johnsonii
DSM 18315]
gi|218222455|gb|EEC95105.1| hypothetical protein PRABACTJOHN_03515 [Parabacteroides johnsonii
DSM 18315]
Length = 471
Score = 41.7 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 46/248 (18%), Positives = 82/248 (33%), Gaps = 48/248 (19%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKVELECRLCVRKKIVELMPK 66
+ LFSGG DS + D TLS D + + +EL +K I+E +
Sbjct: 147 VALFSGGLDS------LIGFIDEASTLSVD---KKILLVSHMELGKEHSDQKSILEYCRE 197
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + L G HS K +TF R+++F +A ++
Sbjct: 198 NNIFSNKYEQV-LLNAGLKPHSWNIKTPTE--------STFR-SRSLLFFAAGIYIANKI 247
Query: 127 --GITNIV-----IGVC-ETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLM 173
IV I + D C I+ I+ A+ + +++ P
Sbjct: 248 SPQCQLIVPENGTISINIPLDSGRRSSCSTRTTHPTFIKRIQEALY-AIGISNSIYNPYR 306
Query: 174 WLKKYETW-KLAQDIGGQDLVNLILEESHTCYL---------GKRDKRYEWGYGCNSCPA 223
K + + QD + ++ +++ S +C + R C C
Sbjct: 307 LKSKADMVLECCQDTSKKAILESLVDLSCSCAKRGHNVFWDKSGIEIRNAKIKHCGMCLP 366
Query: 224 CYLRQKGW 231
C R+
Sbjct: 367 CLYRRVAL 374
>gi|148270897|ref|YP_001245357.1| ExsB family protein [Thermotoga petrophila RKU-1]
gi|147736441|gb|ABQ47781.1| ExsB family protein [Thermotoga petrophila RKU-1]
Length = 268
Score = 41.7 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 26/143 (18%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ +K+ +++FSGG DS+ + + L+ D + +K +
Sbjct: 9 EALKEKKKVVVMFSGGVDSTLLAKLTHEALGENSVALTID-----------SPVIPRKEI 57
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAA 120
E + +G H L ++ L +N + L ++ V
Sbjct: 58 EKAKRLAGLIGIRH--EFIELNELKSRHLIENPPDRCYLCRKLRDSVVKN---------- 105
Query: 121 TLAYRLGITNIVIGVCETDYSGY 143
A G I G+ +D Y
Sbjct: 106 -WAKEHGFEVIADGLNFSDLQDY 127
>gi|261749408|ref|YP_003257093.1| argininosuccinate synthase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497500|gb|ACX83950.1| argininosuccinate synthase(argG)/acetyltransferase activity of
N-acetylglutamate synthase (argA) [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 588
Score = 41.7 bits (97), Expect = 0.094, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L +SGG D+S CL + L + T+ + G + EL+ I + +
Sbjct: 194 DKIVLAYSGGLDTSYCLKYLLQEGYEIHTVIINTGGFKEEELKKIQERALNIGAISHRTI 253
Query: 69 DSLGE 73
D++ E
Sbjct: 254 DAIEE 258
>gi|145589933|ref|YP_001156530.1| argininosuccinate synthase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189046397|sp|A4SZQ2|ASSY_POLSQ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|145048339|gb|ABP34966.1| argininosuccinate synthase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 410
Score = 41.7 bits (97), Expect = 0.094, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ A+L +SGG D+S L W D + + T + D GQ ++E ++ I
Sbjct: 1 MSDIKKAVLAYSGGLDTSVILKWLQDTYGCEIVTFTADLGQGEELEPARAKALQFGI 57
>gi|324503970|gb|ADY41713.1| GMP synthase [glutamine-hydrolyzing] [Ascaris suum]
Length = 769
Score = 41.7 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L++ SGG DS+ C + D+V + D G
Sbjct: 311 KKVLVMVSGGVDSTVCAALMHKALGPDKVVAIHIDNG 347
>gi|312879913|ref|ZP_07739713.1| argininosuccinate synthase [Aminomonas paucivorans DSM 12260]
gi|310783204|gb|EFQ23602.1| argininosuccinate synthase [Aminomonas paucivorans DSM 12260]
Length = 419
Score = 41.7 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
++ +L +SGG D+S + W D+ V T++ D GQ+ +E
Sbjct: 1 MEYKGKVVLAYSGGLDTSVAIQWLKDQGYDVVTMTADVGQQVDLE 45
>gi|326774314|ref|ZP_08233579.1| hypothetical protein SACT1_0074 [Streptomyces cf. griseus
XylebKG-1]
gi|326781442|ref|ZP_08240707.1| hypothetical protein SACT1_7340 [Streptomyces cf. griseus
XylebKG-1]
gi|326654647|gb|EGE39493.1| hypothetical protein SACT1_0074 [Streptomyces cf. griseus
XylebKG-1]
gi|326661775|gb|EGE46621.1| hypothetical protein SACT1_7340 [Streptomyces cf. griseus
XylebKG-1]
Length = 445
Score = 41.7 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 77/243 (31%), Gaps = 53/243 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRF---DRVETLSFDY--GQ--RNKVELECRLCVRKKIVELM 64
+ LFSGG DS C L R+ LS Y GQ R + L +L
Sbjct: 136 VCLFSGGLDS-LCGVIDLLEGNPEQRLYLLS-HYEGGQTPRAQTRLFRQLRAHYG----- 188
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ L + + + + A+ + R+++FL A +A
Sbjct: 189 ---------PRVVSLRLFLRPAPAQPLQARALPHARETTTRS----RSLMFLSTALAIAS 235
Query: 125 RLG-------ITNIVIGVC-------ETDYSGYPDCR---HDTIRAIETAINLGMESHVT 167
+ N IGV S R + +E A +
Sbjct: 236 SISPHVPVYLPENGYIGVNVPLTRARAGSLST----RTTHPHYLALLEQA-KEAIGVPNP 290
Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYL 226
+ P K E ++ Q L+ + ES +C + + E G C C C +
Sbjct: 291 LINPYRLKTKGEMLTSSR---NQPLLRELSPESISCSHPEAARYAERAQGNCGYCFPCLI 347
Query: 227 RQK 229
R+
Sbjct: 348 RRA 350
>gi|229828822|ref|ZP_04454891.1| hypothetical protein GCWU000342_00905 [Shuttleworthia satelles
DSM 14600]
gi|229791985|gb|EEP28099.1| hypothetical protein GCWU000342_00905 [Shuttleworthia satelles
DSM 14600]
Length = 361
Score = 41.7 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + + ++ SGG DSS + RV ++
Sbjct: 1 MSEVKTVVVGMSGGVDSSVAAYLLKEEGYRVIGVT 35
>gi|329943107|ref|ZP_08291881.1| tRNA(Ile)-lysidine synthetase [Chlamydophila psittaci Cal10]
gi|332287689|ref|YP_004422590.1| tRNA(Ile)-lysidine synthetase [Chlamydophila psittaci 6BC]
gi|325506432|gb|ADZ18070.1| tRNA(Ile)-lysidine synthetase [Chlamydophila psittaci 6BC]
gi|328814654|gb|EGF84644.1| tRNA(Ile)-lysidine synthetase [Chlamydophila psittaci Cal10]
Length = 317
Score = 41.7 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 33/180 (18%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ S LL SGG DS L R + DYG R E +++
Sbjct: 17 SALDMKKSYLLALSGGSDSLFLLYLLKSRGVSFTAVHVDYGWR-----ESSYREAEELKL 71
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLV- 117
+ L +H+ ++ + ++ NL IFL
Sbjct: 72 RCQEEGVPLIVNHVPSKDKTSKDPENAARRYRYELFYKICREENLA--------GIFLAH 123
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A A + + ++ G + G + + + + PL+ + K
Sbjct: 124 HANDQAETV-LKRVLEGAHLGNLKG--------------MTSEASYNGIPLLRPLLHIPK 168
>gi|307823553|ref|ZP_07653782.1| argininosuccinate synthase [Methylobacter tundripaludum SV96]
gi|307735538|gb|EFO06386.1| argininosuccinate synthase [Methylobacter tundripaludum SV96]
Length = 404
Score = 41.7 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +L +SGG D+S L W D +D V T + D GQ +VE I ++
Sbjct: 1 MSEINKVVLAYSGGLDTSVILKWLQDVYDCEVVTFTADLGQGEEVEPARAKAQAMGIKDI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 YIEDLREDFARDYVFPM 77
>gi|262306093|gb|ACY45639.1| gln amidotransferase [Phrynus marginemaculatus]
Length = 196
Score = 41.7 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V + D G
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALKDDQVIAIHIDNG 80
>gi|254588106|ref|NP_956881.2| GMP synthase [Danio rerio]
gi|220672808|emb|CAX14207.1| guanine monphosphate synthetase [Danio rerio]
Length = 692
Score = 41.7 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG 43
L+L SGG DS+ C + AL++ ++V + D G
Sbjct: 235 KSKVLVLLSGGVDSTVCTALLNKALNQ-EQVIAVHIDNG 272
>gi|34785183|gb|AAH56730.1| Guanine monphosphate synthetase [Danio rerio]
gi|220672807|emb|CAX14206.1| guanine monphosphate synthetase [Danio rerio]
Length = 359
Score = 41.7 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG 43
L+L SGG DS+ C + AL++ ++V + D G
Sbjct: 235 KSKVLVLLSGGVDSTVCTALLNKALNQ-EQVIAVHIDNG 272
>gi|332703206|ref|ZP_08423294.1| hypothetical protein Desaf_2070 [Desulfovibrio africanus str.
Walvis Bay]
gi|332553355|gb|EGJ50399.1| hypothetical protein Desaf_2070 [Desulfovibrio africanus str.
Walvis Bay]
Length = 355
Score = 41.4 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYG 43
M +K AL LFSGG DS + + V L F YG
Sbjct: 1 MTCKNEKHYDALALFSGGLDSILSVKVLQAQGLSVLALHFVSPFYG 46
>gi|262306103|gb|ACY45644.1| gln amidotransferase [Scutigerella sp. 'Scu3']
Length = 197
Score = 41.4 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
+ L+L SGG DS+ C + + D+V L + G
Sbjct: 40 MVGENKVLMLVSGGVDSTVCAALLHKALKEDQVIALHINNG 80
>gi|253575902|ref|ZP_04853236.1| argininosuccinate synthase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251844696|gb|EES72710.1| argininosuccinate synthase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 412
Score = 41.4 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVELMP 65
+L +SGG D+S L W + +D + + D GQ+ +++ LE + +
Sbjct: 3 KEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEAKALATGASKVYID 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+D +D I P+ G + ++
Sbjct: 63 DLRDEFAKDFIYPMFQAGALYEGQYLLGTSIA 94
>gi|325285134|ref|YP_004260924.1| tRNA-specific 2-thiouridylase mnmA [Cellulophaga lytica DSM 7489]
gi|324320588|gb|ADY28053.1| tRNA-specific 2-thiouridylase mnmA [Cellulophaga lytica DSM 7489]
Length = 396
Score = 41.4 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KKVVVGLSGGVDSSVTAYLLKEQGYDVIGL 31
>gi|307719682|ref|YP_003875214.1| argininosuccinate synthase [Spirochaeta thermophila DSM 6192]
gi|306533407|gb|ADN02941.1| argininosuccinate synthase [Spirochaeta thermophila DSM 6192]
Length = 421
Score = 41.4 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K+ +L +SGG D+S + W +++ V + D GQ+ E + +
Sbjct: 1 MKEIKKIVLAYSGGLDTSIIIPWLKEQYPGCEVVAVCTDVGQKEDWEALKEKALASGASK 60
Query: 63 LMP-KWKDSLGEDHILPLAILGDI 85
+ K+ L D+I P+ G I
Sbjct: 61 IYVLDVKEELVRDYIFPMLRAGAI 84
>gi|167759055|ref|ZP_02431182.1| hypothetical protein CLOSCI_01402 [Clostridium scindens ATCC
35704]
gi|167663462|gb|EDS07592.1| hypothetical protein CLOSCI_01402 [Clostridium scindens ATCC
35704]
Length = 361
Score = 41.4 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV--ELECRLCVRKKIVELM 64
+ ++ SGG DSS ++ V ++ Q + E E C V+
Sbjct: 2 EKKKVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEERIVEEEQGGCCGLSAVDDA 61
Query: 65 PKWKDSLGEDH 75
+ SLG +
Sbjct: 62 RRVAASLGIPY 72
>gi|108763299|ref|YP_632241.1| hypothetical protein MXAN_4063 [Myxococcus xanthus DK 1622]
gi|108467179|gb|ABF92364.1| conserved hypothetical protein TIGR00268 [Myxococcus xanthus DK
1622]
Length = 298
Score = 41.4 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 12/78 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
M ++ SAL+ FSGG DS+ L A++ DR L+ V +
Sbjct: 21 MRAALRAHGSALVAFSGGVDSTFVLKVAVEELGDRALALT-----------ALSASVAPE 69
Query: 60 IVELMPKWKDSLGEDHIL 77
+ + LG H++
Sbjct: 70 EADEARELATRLGARHVV 87
>gi|298490709|ref|YP_003720886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
['Nostoc azollae' 0708]
gi|298232627|gb|ADI63763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
['Nostoc azollae' 0708]
Length = 351
Score = 41.4 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + ++ V L+
Sbjct: 2 KKVVVGLSGGVDSSVAAAMLHNQGYDVIGLT 32
>gi|91793917|ref|YP_563568.1| thiamine biosynthesis protein ThiI [Shewanella denitrificans OS217]
gi|123356624|sp|Q12L31|THII_SHEDO RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|91715919|gb|ABE55845.1| thiamine biosynthesis protein [Shewanella denitrificans OS217]
Length = 486
Score = 41.4 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 70/198 (35%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVE 62
+ L L SGG DS + + R F+ G ++++ + +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGSQHEI----------GVKQ 224
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + GE H + + + + + +I + + + R + + A L
Sbjct: 225 VAYHLWKTYGESHKVKFISVPFEG---VVQEILERIDNGQMG--VILKR--VMMRAATLL 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A + GI +V G S T+ + I+ + + + PL+ + K +
Sbjct: 278 ADKYGIQALVTGESLGQVSS------QTLTNLN-VIDRCTD--LLILRPLIAMDKQDIIN 328
Query: 183 LAQDIGGQDLVNLILEES 200
++ IG +D I E
Sbjct: 329 QSRIIGTEDFAKSIPEYC 346
>gi|296282649|ref|ZP_06860647.1| argininosuccinate synthase [Citromicrobium bathyomarinum JL354]
Length = 412
Score = 41.4 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M++ +L +SGG D+S W ++R V T + D GQ ++E R
Sbjct: 1 MSNNASTNNRVVLAYSGGLDTSVIAKWLEVERGLEVVTFTADLGQGEELEPARRKAQAMG 60
Query: 60 IVE 62
I +
Sbjct: 61 IPD 63
>gi|255525844|ref|ZP_05392773.1| thiamine biosynthesis protein [Clostridium carboxidivorans P7]
gi|255510487|gb|EET86798.1| thiamine biosynthesis protein [Clostridium carboxidivorans P7]
Length = 327
Score = 41.4 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
AL + SGG DS+ D+ V + F + + + + K+I
Sbjct: 3 KALAMMSGGLDSTLAAKLMKDQGIEVIGICFK---SHFFGADNAIRMAKQI 50
>gi|238917090|ref|YP_002930607.1| thiamine biosynthesis protein ThiI [Eubacterium eligens ATCC 27750]
gi|259518555|sp|C4Z0P7|THII_EUBE2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|238872450|gb|ACR72160.1| thiamine biosynthesis protein ThiI [Eubacterium eligens ATCC 27750]
Length = 393
Score = 41.4 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 41/205 (20%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
I A A+LL SGG DS R ++E F + +K +
Sbjct: 176 PIGTAGKAMLLLSGGIDSPVAGYMVAKRGVQIEATYF-----HAPPYTSERAKQKVIDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ K+ + + + I I + + ++ + A
Sbjct: 231 KIVSKYSGPITLNVVNFTDIQMAIYEKCPHDELTIIMRRY-------------MMKIAED 277
Query: 122 LAYRLGITNIVIG------VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
L G +V G +T S Y C ++ + + V P++
Sbjct: 278 LGKSSGCQGLVTGESIGQVASQTMASLY--CTNE----------VCT---MPVFRPVIGF 322
Query: 176 KKYETWKLAQDIGGQDLVNLILEES 200
K E +++ IG + E+
Sbjct: 323 DKQEIIDISEKIGSYETSIQPFEDC 347
>gi|167045031|gb|ABZ09695.1| putative domain of unknown function (DUF814) [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 349
Score = 41.4 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++ + + L SGG DS+ + + V ++
Sbjct: 15 LMVEKKKVVALLSGGLDSTLAVKTMQKQGFEVSAVAI 51
>gi|229542770|ref|ZP_04431830.1| ExsB family protein [Bacillus coagulans 36D1]
gi|229327190|gb|EEN92865.1| ExsB family protein [Bacillus coagulans 36D1]
Length = 269
Score = 41.4 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 66/195 (33%), Gaps = 46/195 (23%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFD---YGQRNKVELECRLCVR 57
I+K+ S ++ FSGG DS+ L A+D D+V ++ D Y ELE +
Sbjct: 10 QILKEMDSVVVAFSGGVDSTFLLKVAVDVLGADKVLAVTADSETYP---STELEEAKKLA 66
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
I ++ + L I + N L +P N
Sbjct: 67 ALIGA----------RHQVIKTSELS-IPGYAKNDWNRCYFCKNGLFEEILPIMN----- 110
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WL 175
+ G N+V G+ D + R A E V PL L
Sbjct: 111 -------QKGFRNVVYGLIADDMGEH---RPGIRAAKEH----------GVRGPLQEANL 150
Query: 176 KKYETWKLAQDIGGQ 190
K E KL++++G
Sbjct: 151 YKEEIRKLSKELGLP 165
>gi|262306069|gb|ACY45627.1| gln amidotransferase [Leiobunum verrucosum]
Length = 196
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V L D G
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALKEDQVIALHIDNG 80
>gi|154337399|ref|XP_001564932.1| GMP synthase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134061971|emb|CAM45055.1| putative glutamine amidotransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 656
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG--QRNKVELECRLCVRK 58
+ L L SGG DS+ C L +RV + D+G + ++
Sbjct: 217 ERTSNGQKVLCLASGGVDSTVCAMLLLKALGPERVVCIHIDHGFMRLHESAQVVEALNAA 276
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLT--KNVAMKIQDNNLPNTF 107
+ + K +D + A G ++++ + + + N + NTF
Sbjct: 277 GVRVHLVKAQDDFATASTVMTAKRGRAAYTTNKLCETTDPEEKRNIIGNTF 327
>gi|224824999|ref|ZP_03698105.1| Argininosuccinate synthase [Lutiella nitroferrum 2002]
gi|224602670|gb|EEG08847.1| Argininosuccinate synthase [Lutiella nitroferrum 2002]
Length = 406
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+ +L +SGG D+S L W D + V T + D GQ +VE + V I +
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEVEPARKKAVALGIKQE 60
Query: 63 --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 NIFIDDLREEFVRDFVFPMFRANAIYEGEYLLGTSIA 97
>gi|242013853|ref|XP_002427615.1| GMP synthase, putative [Pediculus humanus corporis]
gi|212512030|gb|EEB14877.1| GMP synthase, putative [Pediculus humanus corporis]
Length = 685
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
LLL SGG DS+ C + R D+V + D G
Sbjct: 229 NNKVLLLVSGGVDSTVCAALLHKALRPDQVIAVHIDNG 266
>gi|109946881|ref|YP_664109.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter acinonychis str.
Sheeba]
gi|122973425|sp|Q17Z16|MNMA_HELAH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|109714102|emb|CAJ99110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter acinonychis str. Sheeba]
Length = 342
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKWKDS 70
+L SGG DSS ++ + + Y + + E + + +K E +
Sbjct: 5 VLLSGGVDSSYSAYNLKEQGHELVGI---YLKLHASEKKHDLYIKNAQKACEFLGIP--- 58
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
L + S + ++ PN P N + A A +LG
Sbjct: 59 ------LEVLDFQKDFKSVVYDAFISAYEEGQTPN---PCALCNPLMKFGLALDHALKLG 109
Query: 128 ITNIVIG 134
I G
Sbjct: 110 CEKIATG 116
>gi|88801179|ref|ZP_01116722.1| argininosuccinate synthase [Reinekea sp. MED297]
gi|88776082|gb|EAR07314.1| argininosuccinate synthase [Reinekea sp. MED297]
Length = 406
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S W + +D V T + D GQ +VE I E+
Sbjct: 1 MSDIKKVVLAYSGGLDTSVIAKWIAETYDCEVVTFTADLGQGEEVEPARAKAQALGIKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|149738218|ref|XP_001499390.1| PREDICTED: similar to Argininosuccinate synthase
(Citrulline--aspartate ligase) [Equus caballus]
Length = 412
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSGKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|27806925|ref|NP_776317.1| argininosuccinate synthase [Bos taurus]
gi|114285|sp|P14568|ASSY_BOVIN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|162697|gb|AAA30388.1| argininosuccinate synthetase [Bos taurus]
gi|74268328|gb|AAI02475.1| Argininosuccinate synthetase 1 [Bos taurus]
gi|296482159|gb|DAA24274.1| argininosuccinate synthase [Bos taurus]
Length = 412
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSGKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|317498544|ref|ZP_07956838.1| tRNA methyl transferase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894237|gb|EFV16425.1| tRNA methyl transferase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 363
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + V ++
Sbjct: 1 MKEKVVVGMSGGVDSSVAAYLLKKQGYDVIGVT 33
>gi|167765590|ref|ZP_02437654.1| hypothetical protein CLOSS21_00084 [Clostridium sp. SS2/1]
gi|167712775|gb|EDS23354.1| hypothetical protein CLOSS21_00084 [Clostridium sp. SS2/1]
Length = 363
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + V ++
Sbjct: 1 MKEKVVVGMSGGVDSSVAAYLLKKQGYDVIGVT 33
>gi|163782463|ref|ZP_02177461.1| DNA mismatch repair protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882496|gb|EDP76002.1| DNA mismatch repair protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 398
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
A +L +SGG D+S + W D+ V T + D GQ + E+ + + ++
Sbjct: 1 MAKRVVLAYSGGLDTSVIVRWLTDKGYEVITYTADVGQGEELAEIPDKARAAGAVEAIVE 60
Query: 66 KWKDSLGEDHILP 78
K+ D LP
Sbjct: 61 DIKEEFARDFCLP 73
>gi|297537830|ref|YP_003673599.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylotenera sp. 301]
gi|297257177|gb|ADI29022.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylotenera sp. 301]
Length = 369
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 13/38 (34%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN ++ SGG DSS + V L
Sbjct: 1 MNLNKSSKKHVVVGLSGGVDSSVTALLLKQQGYEVTGL 38
>gi|326791555|ref|YP_004309376.1| argininosuccinate synthase [Clostridium lentocellum DSM 5427]
gi|326542319|gb|ADZ84178.1| argininosuccinate synthase [Clostridium lentocellum DSM 5427]
Length = 402
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D+S + W + + V + + GQ ++E LE R +
Sbjct: 1 MKEKVVLAYSGGLDTSVIIPWLKENYDYDVIAVCINVGQDAELEGLEERALSMGVSKVYV 60
Query: 65 PKWKDSLGEDHILPLAILGDISHS 88
KD +++ P+ G I S
Sbjct: 61 ENVKDEFMREYVFPMIQSGAIYES 84
>gi|291527010|emb|CBK92596.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium rectale M104/1]
Length = 362
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVT 33
>gi|291526521|emb|CBK92108.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium rectale DSM 17629]
Length = 362
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVT 33
>gi|238922734|ref|YP_002936247.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium rectale ATCC 33656]
gi|238874406|gb|ACR74113.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium rectale ATCC 33656]
Length = 362
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVT 33
>gi|210622568|ref|ZP_03293250.1| hypothetical protein CLOHIR_01198 [Clostridium hiranonis DSM 13275]
gi|210154151|gb|EEA85157.1| hypothetical protein CLOHIR_01198 [Clostridium hiranonis DSM 13275]
Length = 357
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 19/135 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+L SGG DSS ++ V ++ N E + + + +
Sbjct: 1 MKKKVMLGMSGGVDSSVAAYLLKEQGYDVIGVNMMLSNDNTEE---EKRMTEDSIRDARR 57
Query: 67 WKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFA 119
+ L H+L + + + + P N F+ +F
Sbjct: 58 VAEKLDIPLHVLD---FRREFKEKVIDDFIKEYAEGRTPNPCIVCNKFIKF--GLFFDV- 111
Query: 120 ATLAYRLGITNIVIG 134
A + G + G
Sbjct: 112 ---AEKFGCDYVATG 123
>gi|86133287|ref|ZP_01051869.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Polaribacter sp. MED152]
gi|85820150|gb|EAQ41297.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Polaribacter sp. MED152]
Length = 395
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KRVVVGLSGGVDSSVTAHLLKEQGYEVIGL 31
>gi|320165389|gb|EFW42288.1| GMP synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 687
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L+L SGG DSS C + DRV L D G
Sbjct: 225 KKVLVLVSGGVDSSVCAALLTKAINPDRVVALHIDNG 261
>gi|288930595|ref|YP_003434655.1| argininosuccinate synthase [Ferroglobus placidus DSM 10642]
gi|288892843|gb|ADC64380.1| argininosuccinate synthase [Ferroglobus placidus DSM 10642]
Length = 395
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+L +SGG D++ C+ +++ + V T++ D GQ + EL+ KK +
Sbjct: 3 KVVLCYSGGLDTTVCIPLLREKYGFEEVVTVTVDIGQ-PEEELKKAEERGKKYAD 56
>gi|114570862|ref|YP_757542.1| hypothetical protein Mmar10_2312 [Maricaulis maris MCS10]
gi|114341324|gb|ABI66604.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 439
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 148 HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGK 207
I +++ AI + + P + K E + +D Q LV ++ ++ +C
Sbjct: 273 PHFISSLQ-AIFDEVGIPAAIENPYFFKTKGEALRECRD---QPLVTKLISKTTSC---- 324
Query: 208 RDKRYEWGYGCNSCPACYLRQKGWMEFK 235
K + C C C +R+ +
Sbjct: 325 -GKWKRYWQQCGRCVPCLIRRSAFHAAG 351
>gi|227486179|ref|ZP_03916495.1| argininosuccinate synthase [Anaerococcus lactolyticus ATCC 51172]
gi|227235810|gb|EEI85825.1| argininosuccinate synthase [Anaerococcus lactolyticus ATCC 51172]
Length = 413
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
+++K+A +L +SGG D+S ++W ++ V +S D GQ
Sbjct: 7 EVLKEAKKVVLAYSGGLDTSVMVTWLMENGAKEVICVSVDLGQ 49
>gi|86604778|ref|YP_473541.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. JA-3-3Ab]
gi|123508144|sp|Q2JY34|MNMA_SYNJA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|86553320|gb|ABC98278.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Synechococcus sp. JA-3-3Ab]
Length = 370
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 22/135 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P + SGG DSST + ++ VE ++ + C +V+
Sbjct: 18 SRPRIVAALSGGVDSSTVAAILHEQGYAVEGVTL------WLMRGKGQCCTDGLVDAAAI 71
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NII-----FLVFA 119
+ HI+ L + + + + + T +P N + L +A
Sbjct: 72 CEQLGIPHHIVDSRELFQ----ANIVDYLVAGYADGI--TPLPCSQCNKLVKFGPLLTYA 125
Query: 120 ATLAYRLGITNIVIG 134
LGI+ I G
Sbjct: 126 R---ETLGISQIATG 137
>gi|114563950|ref|YP_751464.1| thiamine biosynthesis protein ThiI [Shewanella frigidimarina NCIMB
400]
gi|122299147|sp|Q07ZD9|THII_SHEFN RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|114335243|gb|ABI72625.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
frigidimarina NCIMB 400]
Length = 484
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + + R F+ G + E+ + ++
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGG-AQHEI--------GVKQV 225
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
GE H + + + + + +I + + V R + + A +A
Sbjct: 226 AYHLWKKYGESHKVR---FVSVPFEPVVEEILERIDNGQMG--VVLKR--VMMRAATRIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ GI +V G S + + + + + + PL+ + K +
Sbjct: 279 DKYGIQALVTGESLGQVSS---------QTLTNLNVIDRSTDLLILRPLIAMDKQDIINQ 329
Query: 184 AQDIGGQDLVNLILEES 200
++ IG +D I E
Sbjct: 330 SRIIGTEDFAKSIPEYC 346
>gi|302391059|ref|YP_003826879.1| PP-loop domain protein [Acetohalobium arabaticum DSM 5501]
gi|302203136|gb|ADL11814.1| PP-loop domain protein [Acetohalobium arabaticum DSM 5501]
Length = 272
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 63/203 (31%), Gaps = 38/203 (18%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
DI++ S L+ FSGG DS+ L A D D+ L+
Sbjct: 13 DILRSMDSLLVAFSGGVDSTLLLKVAHDILGDQAAALTV-----------EASIHPPGEA 61
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
E + +G +HIL A + + N+
Sbjct: 62 EEAEELAQQMGVEHILVEADPLQNEDFARNDKLRCYYCKYNI------------FSDLKE 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + G + G D++G D R ++A E + K E
Sbjct: 110 IAAKEGYAELADGANYDDFTG--DYRPG-LKAAEELGVRSPLKEAEI-------TKEEVR 159
Query: 182 KLAQDIGGQDLVNLILEESHTCY 204
KL++ + + S +CY
Sbjct: 160 KLSKRL-DLPTWDKP---SLSCY 178
>gi|300933436|ref|ZP_07148692.1| argininosuccinate synthase [Corynebacterium resistens DSM 45100]
Length = 398
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQ 44
+L +SGG D++ +SW A +R V +S D GQ
Sbjct: 1 MKDRVVLAYSGGLDTTVAISWIAKERNAEVVAVSIDLGQ 39
>gi|262306113|gb|ACY45649.1| gln amidotransferase [Streptocephalus seali]
Length = 197
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELEC------RLCVRKK 59
L+L SGG DS+ C + D++ + D G K E+ RL ++ K
Sbjct: 43 NQKVLVLVSGGVDSTVCAALLTRALNPDQLIAIHIDNGFLRKGEVTQVEKNLTRLGLKLK 102
Query: 60 IVELMPKWKDSLGEDHI 76
++ P + + + E +
Sbjct: 103 VIRAAPAFYEGVTEILV 119
>gi|156057843|ref|XP_001594845.1| argininosuccinate synthetase [Sclerotinia sclerotiorum 1980]
gi|154702438|gb|EDO02177.1| argininosuccinate synthetase [Sclerotinia sclerotiorum 1980
UF-70]
Length = 412
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
A + L +SGG D+S L+W +++ V D GQ + + E KI +
Sbjct: 1 MAKDKVCLAYSGGLDTSCILAWLIEKGYDVVCFMADVGQ--EEDFEAAKAKALKIGAVA 57
>gi|57640895|ref|YP_183373.1| ATPase [Thermococcus kodakarensis KOD1]
gi|57159219|dbj|BAD85149.1| predicted ATPase, PP-loop superfamily [Thermococcus kodakarensis
KOD1]
Length = 272
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+LFSGG+DSS L + V L+F
Sbjct: 20 EKRVLMLFSGGKDSSLALYILKEAGLDVSALTF 52
>gi|37520120|ref|NP_923497.1| tRNA-specific 2-thiouridylase MnmA [Gloeobacter violaceus PCC
7421]
gi|73920124|sp|Q7MBC9|MNMA_GLOVI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|35211112|dbj|BAC88492.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Gloeobacter violaceus PCC 7421]
Length = 357
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ +P + SGG DSS + + RV ++
Sbjct: 1 MTSSPKIVAALSGGVDSSVAAALVRKQGYRVCGVT 35
>gi|161833715|ref|YP_001597911.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Sulcia muelleri GWSS]
gi|205828995|sp|A8Z5W4|MNMA_SULMW RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|152206205|gb|ABS30515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Sulcia muelleri GWSS]
Length = 380
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY 42
+ K ++ SGG DSS + V + Y
Sbjct: 1 MNVKRKRVIVGMSGGVDSSVAALLLKKQGYDVIGIFMKY 39
>gi|91203861|emb|CAJ71514.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 340
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL L SGG DS+ + ++ V L+F
Sbjct: 3 KALALLSGGLDSTLAIRVIQEQGIEVIALNF 33
>gi|29348763|ref|NP_812266.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides thetaiotaomicron
VPI-5482]
gi|81443497|sp|Q8A2F1|MNMA2_BACTN RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|29340669|gb|AAO78460.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides thetaiotaomicron VPI-5482]
Length = 370
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 19/80 (23%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG----------QRNKVEL-- 50
++++ LL SGG DSS L+ V ++F Y R+ E
Sbjct: 1 MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTEYLEDARHLAERLG 60
Query: 51 ------ECRLCVRKKIVELM 64
+ R RK+I+E
Sbjct: 61 IRHITYDAREIFRKQIIEYF 80
>gi|225026476|ref|ZP_03715668.1| hypothetical protein EUBHAL_00725 [Eubacterium hallii DSM 3353]
gi|224956215|gb|EEG37424.1| hypothetical protein EUBHAL_00725 [Eubacterium hallii DSM 3353]
Length = 354
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
A AL+ SGG DSS + ++
Sbjct: 1 MAKKALIAMSGGVDSSVAAYLMKEAGYDCIGVT 33
>gi|166154184|ref|YP_001654302.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 434/Bu]
gi|166155059|ref|YP_001653314.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335429|ref|ZP_07223673.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis L2tet1]
gi|259533695|sp|B0B969|TILS_CHLT2 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|259533707|sp|B0BAU8|TILS_CHLTB RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|165930172|emb|CAP03656.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 434/Bu]
gi|165931047|emb|CAP06610.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 321
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 53/188 (28%), Gaps = 38/188 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K LL SGG DS + R + DYG R E E
Sbjct: 17 SSLDKKKKYLLALSGGSDSLFLMYLLKSRAIFFTAVHVDYGWRETSYQEASDLAALCEQE 76
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-------NIIF 115
+P IL D S +N A + + R + +F
Sbjct: 77 QIPF---------ILDRPEATDPMDSRDIENAARRYRYELF------YRLCKEKCFSGVF 121
Query: 116 LV-FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
L A A + + + G + G M V + PL+
Sbjct: 122 LGHHADDQAETI-LKRVFEGAHLGNLKG--------------MSAQVMYRDVALLRPLLH 166
Query: 175 LKKYETWK 182
+ K++ +
Sbjct: 167 IPKHKIVE 174
>gi|157813134|gb|ABV81312.1| putative GMP synthetase [Lithobius forticatus]
Length = 197
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V + D G
Sbjct: 43 NHKVLMLVSGGVDSTVCAALLHKALKEDQVIAVHIDNG 80
>gi|197118358|ref|YP_002138785.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase
[Geobacter bemidjiensis Bem]
gi|197087718|gb|ACH38989.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase
[Geobacter bemidjiensis Bem]
Length = 359
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 46/143 (32%), Gaps = 20/143 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
M+D K L+ SGG DSS + ++ V +S Y + + C
Sbjct: 1 MSDKAGK-KQILVAMSGGVDSSVTAALLKEQGHDVMGVSLQLYERPESTPSGGKTCCSLT 59
Query: 60 IVELMPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GR-N---- 112
V + LG ++ L + + N + PN P R N
Sbjct: 60 DVMDAARVAKRLGIPFEVIDL---RERFKELVIDNFTAEYAAGRTPN---PCARCNERIK 113
Query: 113 -IIFLVFAATLAYRLGITNIVIG 134
+ L AA+ G + G
Sbjct: 114 FGLLLDMAASF----GADLLATG 132
>gi|76789585|ref|YP_328671.1| TilS [Chlamydia trachomatis A/HAR-13]
gi|237803272|ref|YP_002888466.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis B/Jali20/OT]
gi|237805193|ref|YP_002889347.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311681|ref|ZP_05354251.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 6276]
gi|255317982|ref|ZP_05359228.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 6276s]
gi|255349245|ref|ZP_05381252.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 70]
gi|255503782|ref|ZP_05382172.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 70s]
gi|255507463|ref|ZP_05383102.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis D(s)2923]
gi|123606544|sp|Q3KKJ9|TILS_CHLTA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|76168115|gb|AAX51123.1| TilS [Chlamydia trachomatis A/HAR-13]
gi|231273493|emb|CAX10409.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274506|emb|CAX11302.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis B/Jali20/OT]
gi|289525886|emb|CBJ15368.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis Sweden2]
gi|296435472|gb|ADH17650.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis E/150]
gi|296436396|gb|ADH18570.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis G/9768]
gi|296438255|gb|ADH20416.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis G/11074]
gi|296439189|gb|ADH21342.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis E/11023]
gi|297140756|gb|ADH97514.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis G/9301]
Length = 321
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 53/188 (28%), Gaps = 38/188 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K LL SGG DS + R + DYG R E E
Sbjct: 17 SSLDKKKKYLLALSGGSDSLFLMYLLKSRAIFFTAVHVDYGWRETSYQEASDLAALCEQE 76
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-------NIIF 115
+P IL D S +N A + + R + +F
Sbjct: 77 QIPF---------ILDRPEATDPMDSRDIENAARRYRYELF------YRLCKEKCFSGVF 121
Query: 116 LV-FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
L A A + + + G + G M V + PL+
Sbjct: 122 LGHHADDQAETI-LKRVFEGAHLGNLKG--------------MSAQVMYRDVALLRPLLH 166
Query: 175 LKKYETWK 182
+ K++ +
Sbjct: 167 IPKHKIVE 174
>gi|88803301|ref|ZP_01118827.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Polaribacter irgensii 23-P]
gi|88780867|gb|EAR12046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Polaribacter irgensii 23-P]
Length = 173
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 2 KRVIVGLSGGVDSSVTAYLLKKQGYEVIGL 31
>gi|291461244|ref|ZP_06027845.2| ThiI family protein [Fusobacterium periodonticum ATCC 33693]
gi|291378101|gb|EFE85619.1| ThiI family protein [Fusobacterium periodonticum ATCC 33693]
Length = 337
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
M D +K+ AL LFSGG DS+ + D+ V L+F
Sbjct: 1 MKD-LKEKIKALALFSGGLDSALAIKVVQDQGVEVIGLNF 39
>gi|253682565|ref|ZP_04863362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum D str. 1873]
gi|253562277|gb|EES91729.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum D str. 1873]
Length = 346
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 27/134 (20%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ + SGG DSS ++ + ++ +++ K +L
Sbjct: 1 MSKKVAIGLSGGVDSSVAAYLLKEKGYDLIGITMK-----VSDVDVSEDAAKIAQKLDIP 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAA 120
+ HIL L D + + N A + P N ++ + L
Sbjct: 56 Y-------HILDL---RDEFKNHVIDNFAKEYLQGRTPNPCAMCNKYIKF--GVLLQ--- 100
Query: 121 TLAYRLGITNIVIG 134
A LG I G
Sbjct: 101 -KAKELGADYIATG 113
>gi|332993407|gb|AEF03462.1| tRNA-specific 2-thiouridylase MnmA [Alteromonas sp. SN2]
Length = 369
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 52/145 (35%), Gaps = 25/145 (17%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRK 58
M DI A +++ SGG DSS L + +VE L +N E + C+
Sbjct: 1 MTDIESNASKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFM----KNWEEDDNDEYCLAA 56
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---- 114
+ ++ D LG + L I+ ++ + + P +I+
Sbjct: 57 EDLKDAQAVADKLGIE-------LHTINFAAEYWDNVFEYFLEEYKAGRTPNPDIMCNKE 109
Query: 115 -----FLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 110 IKFKAFLEFA---AEDLGADYIATG 131
>gi|313149619|ref|ZP_07811812.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138386|gb|EFR55746.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 362
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ + L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MKESNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAVRMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LV 117
+ + +KD++ ++ I + + PN V N +F
Sbjct: 59 YVADERVPFKDTIVKNFI-------------------DEYRQGRTPNPCVMC-NPLFKFR 98
Query: 118 FAATLAYRLGITNIVIG 134
A +LG I G
Sbjct: 99 MLIEWADKLGCDWIATG 115
>gi|193216582|ref|YP_001999824.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma arthritidis
158L3-1]
gi|229486415|sp|B3PM68|MNMA_MYCA5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|193001905|gb|ACF07120.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma arthritidis 158L3-1]
Length = 370
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
A +L SGG DSS C + V L
Sbjct: 1 MAKRVVLGMSGGVDSSVCAYLLQQQGYEVVGL 32
>gi|157869227|ref|XP_001683165.1| GMP synthase; glutamine amidotransferase [Leishmania major strain
Friedlin]
gi|68224049|emb|CAJ03818.1| putative GMP synthase [Leishmania major strain Friedlin]
Length = 656
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 40/114 (35%), Gaps = 21/114 (18%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG------QRNKVELECRLCVRKKI 60
L L SGG DS+ C L +RV + D+G VE VR +
Sbjct: 223 QKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHGFMRLNESVQAVEALNAAGVRVHL 282
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
V+ + + E + S ++ T N ++ D RNII
Sbjct: 283 VKAQEDFAQASTE-------MTAKGSRAAYTTNKLREVTDPEEK------RNII 323
>gi|15605575|ref|NP_220361.1| PP-loop superfamily ATPase [Chlamydia trachomatis D/UW-3/CX]
gi|61216368|sp|O84847|TILS_CHLTR RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|3329312|gb|AAC68437.1| PP-loop superfamily ATPase [Chlamydia trachomatis D/UW-3/CX]
gi|296437327|gb|ADH19497.1| PP-loop superfamily ATPase [Chlamydia trachomatis G/11222]
gi|297748968|gb|ADI51514.1| TilS [Chlamydia trachomatis D-EC]
gi|297749848|gb|ADI52526.1| TilS [Chlamydia trachomatis D-LC]
Length = 321
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 53/188 (28%), Gaps = 38/188 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K LL SGG DS + R + DYG R E E
Sbjct: 17 SSLDKKKKYLLALSGGSDSLFLMYLLKSRAIFFTAVHVDYGWRETSYQEASDLAALCEQE 76
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-------NIIF 115
+P IL D S +N A + + R + +F
Sbjct: 77 QIPF---------ILDRPEATDPMDSRDIENAARRYRYELF------YRLCKEKCFSGVF 121
Query: 116 LV-FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
L A A + + + G + G M V + PL+
Sbjct: 122 LGHHADDQAETI-LKRVFEGAHLGNLKG--------------MSAQVMYRDVALLRPLLH 166
Query: 175 LKKYETWK 182
+ K++ +
Sbjct: 167 IPKHKIVE 174
>gi|313681210|ref|YP_004058948.1| queuosine synthesis [Sulfuricurvum kujiense DSM 16994]
gi|313154070|gb|ADR32748.1| Queuosine synthesis [Sulfuricurvum kujiense DSM 16994]
Length = 323
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A+ LFSGG DS+ +D+ V + + G
Sbjct: 2 KAIALFSGGLDSTLAAKLIIDQGIEVIACNINTG 35
>gi|308235339|ref|ZP_07666076.1| tRNA(Ile)-lysidine synthase [Gardnerella vaginalis ATCC 14018]
gi|311114324|ref|YP_003985545.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Gardnerella vaginalis ATCC 14019]
gi|310945818|gb|ADP38522.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Gardnerella vaginalis ATCC 14019]
Length = 363
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVE--LECRLCVR 57
+ AP L+ SGG+DS + A+ R R + + N E +
Sbjct: 38 ALPNAPIVLVACSGGRDSLALTALAVKVCASRGIRCAAIIVN---HNMQEGSAKVAQNAA 94
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ L E + G+ S + + A+ +L +
Sbjct: 95 NTVASLGVDKSLIFVESVQVKDGEKGEESAARDARYAAIINAAKDLGAS----------A 144
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
++IG+ D +G + A+ N+ + S + PL+ L++
Sbjct: 145 VLLAHTADDQAETVIIGL--RDSAG--------LEAVAGMKNITVRSGIRFARPLINLRR 194
Query: 178 YETWKLAQDIG 188
ET + +D+G
Sbjct: 195 LETTNICKDLG 205
>gi|154150379|ref|YP_001403997.1| argininosuccinate synthase [Candidatus Methanoregula boonei 6A8]
gi|153998931|gb|ABS55354.1| Argininosuccinate synthase [Methanoregula boonei 6A8]
Length = 403
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 12 LLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE--LMPKW 67
+L +SGG D+S C+ +R +DRV T++ + GQR++ E++ KK+ +
Sbjct: 7 VLAYSGGLDTSICIPLLKERYDYDRVVTVAVNVGQRDE-EIDVATKKGKKLADRHYTIDV 65
Query: 68 KDSLGEDHILP 78
++ +HI P
Sbjct: 66 RERFVAEHIFP 76
>gi|146281587|ref|YP_001171740.1| argininosuccinate synthase [Pseudomonas stutzeri A1501]
gi|166221011|sp|A4VIU7|ASSY_PSEU5 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|145569792|gb|ABP78898.1| argininosuccinate synthase [Pseudomonas stutzeri A1501]
gi|327479765|gb|AEA83075.1| argininosuccinate synthase [Pseudomonas stutzeri DSM 4166]
Length = 405
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQALGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|52549269|gb|AAU83118.1| argininosuccinate synthase [uncultured archaeon GZfos26F9]
Length = 388
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQ-----RNKVELECRLCVRKKIV 61
+L +SGG D+S C+ + +D V ++ D GQ + E +LC + +
Sbjct: 2 KKVVLAYSGGLDTSVCIPLLKEHYGYDEVIAVTVDVGQPEDDIKEAKERGAKLCDSYREI 61
Query: 62 ELMPKW 67
+ ++
Sbjct: 62 DAKEEF 67
>gi|315644384|ref|ZP_07897524.1| tRNA(Ile)-lysidine synthetase [Paenibacillus vortex V453]
gi|315280261|gb|EFU43553.1| tRNA(Ile)-lysidine synthetase [Paenibacillus vortex V453]
Length = 476
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 56/199 (28%), Gaps = 47/199 (23%)
Query: 12 LLLFSGGQDSSTCLSWALDRFD-----RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DS L + R+ +G R + + E + + EL +
Sbjct: 30 VVAVSGGPDSVALLHVLHEISLNHTPLRLICAHVHHGFRTESDQEAEM-----VRELAER 84
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L I A + + + + FL A +
Sbjct: 85 LGLPLETAFIDIPAYMEESGKGGQEAAREKRYE---------------FL---LQTAQKY 126
Query: 127 GITNIVIGVCETD-----------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
++ + D SG P + E V + P + +
Sbjct: 127 NARSVALAHHADDQAETVLMRLLRGSGLP--------GLAGIKFKRTEKKVELIRPFLRM 178
Query: 176 KKYETWKLAQDIGGQDLVN 194
K + +L + G Q V+
Sbjct: 179 YKADIVELCRVCGFQYAVD 197
>gi|311897518|dbj|BAJ29926.1| hypothetical protein KSE_41390 [Kitasatospora setae KM-6054]
Length = 563
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 8/85 (9%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE---LECRLCVRKKIVELMPKWKDSL 71
SGG DS+T A + V L+ Y + + E L+ V + +
Sbjct: 216 LSGGLDSTTLAVLA-SKCGPVVGLT--YHPKGREEGGDLDHARTVAHAFPRIRHRLMALG 272
Query: 72 GEDHILPLAILGDISHSSLTKNVAM 96
E LP LG + + A+
Sbjct: 273 PEH--LPFTDLGTLPLTDEPAPSAI 295
>gi|284043133|ref|YP_003393473.1| tRNA(Ile)-lysidine synthetase [Conexibacter woesei DSM 14684]
gi|283947354|gb|ADB50098.1| tRNA(Ile)-lysidine synthetase [Conexibacter woesei DSM 14684]
Length = 455
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 12 LLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVR 57
++L SGG+DS L A+ V + +YG R+ + + R C +
Sbjct: 23 VVLLSGGRDSVCLLDVAVRIAGAPAVSAVHVNYGLRDDADDDERHCAQ 70
>gi|126297761|ref|XP_001364691.1| PREDICTED: similar to Prmd14 [Monodelphis domestica]
Length = 412
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ + +L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 MSGKGTVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48
>gi|117926424|ref|YP_867041.1| hypothetical protein Mmc1_3145 [Magnetococcus sp. MC-1]
gi|117610180|gb|ABK45635.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
Length = 346
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKIVEL 63
AL L SGG DS +++ V ++F G Q + + + +
Sbjct: 2 SKSRALGLLSGGLDSMLATKLLMEQDIEVHCVNFYTGFCVQSHTGAIRAKAGDPPPKHDA 61
Query: 64 MPKWKDSLGEDHILPLA 80
+ + + HI+ ++
Sbjct: 62 LHAAQILGIKLHIVDIS 78
>gi|49471691|gb|AAT66133.1| tRNA (5-methylaminomethyl-2-thiouridyl-methyltransferase-like
protein [Mycoplasma arthritidis]
Length = 109
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
A +L SGG DSS C + V L
Sbjct: 1 MAKRVVLGMSGGVDSSVCAYLLQQQGYEVVGL 32
>gi|332098574|gb|EGJ03540.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
boydii 3594-74]
Length = 476
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 167 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 220
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 221 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 270
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 271 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 321
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 322 ARQIGTEDFART 333
>gi|332094578|gb|EGI99624.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
boydii 5216-82]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|332085601|gb|EGI90765.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
dysenteriae 155-74]
Length = 476
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 167 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 220
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 221 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 270
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 271 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 321
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 322 ARQIGTEDFART 333
>gi|325498294|gb|EGC96153.1| tRNA s(4)U8 sulfurtransferase [Escherichia fergusonii ECD227]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|324114642|gb|EGC08610.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
fergusonii B253]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|323976096|gb|EGB71189.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TW10509]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|323157127|gb|EFZ43251.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli EPECa14]
Length = 352
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 43 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 96
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 97 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 146
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 147 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 197
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 198 ARQIGTEDFART 209
>gi|320638417|gb|EFX08131.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O157:H7 str. G5101]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|331681817|ref|ZP_08382450.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H299]
gi|331081019|gb|EGI52184.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H299]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|331651359|ref|ZP_08352384.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli M718]
gi|331051100|gb|EGI23152.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli M718]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|300937033|ref|ZP_07151899.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 21-1]
gi|300457864|gb|EFK21357.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 21-1]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|300918196|ref|ZP_07134803.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 115-1]
gi|300414647|gb|EFJ97957.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 115-1]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|293408570|ref|ZP_06652409.1| thiamine biosynthesis protein ThiI [Escherichia coli B354]
gi|291471748|gb|EFF14231.1| thiamine biosynthesis protein ThiI [Escherichia coli B354]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|293413678|ref|ZP_06656327.1| thiamine biosynthesis protein ThiI [Escherichia coli B185]
gi|291433736|gb|EFF06709.1| thiamine biosynthesis protein ThiI [Escherichia coli B185]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|284920233|emb|CBG33292.1| thiamine biosynthesis protein ThiI [Escherichia coli 042]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|281177593|dbj|BAI53923.1| thiamine biosynthesis protein ThiI [Escherichia coli SE15]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|281413177|ref|YP_003347256.1| NAD synthase [Thermotoga naphthophila RKU-10]
gi|281374280|gb|ADA67842.1| NAD synthase [Thermotoga naphthophila RKU-10]
Length = 268
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKI 60
++ IK +++FSGG DS+ A + + L+ D + E+E + I
Sbjct: 8 SEAIKSKKKLVVMFSGGVDSTLLAKLAREVLEKNAVALTIDSPVIPRKEIEEAKNLANLI 67
Query: 61 -VELMPKWKDSLGEDHIL 77
+ + L H++
Sbjct: 68 GIRHEFIELNELKSRHLI 85
>gi|302879502|ref|YP_003848066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Gallionella capsiferriformans ES-2]
gi|302582291|gb|ADL56302.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Gallionella capsiferriformans ES-2]
Length = 366
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS + V L
Sbjct: 1 MNKNKRVVVGMSGGVDSSVTALLLKQQGYDVIGL 34
>gi|291281330|ref|YP_003498148.1| Thiamine biosynthesis protein thiI [Escherichia coli O55:H7 str.
CB9615]
gi|209743994|gb|ACI70304.1| putative oxidoreductase [Escherichia coli]
gi|209744000|gb|ACI70307.1| putative oxidoreductase [Escherichia coli]
gi|290761203|gb|ADD55164.1| Thiamine biosynthesis protein thiI [Escherichia coli O55:H7 str.
CB9615]
gi|320643797|gb|EFX12920.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O157:H- str.
493-89]
gi|320649148|gb|EFX17726.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O157:H- str. H
2687]
gi|320656041|gb|EFX23957.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320661191|gb|EFX28622.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O55:H7 str. USDA
5905]
gi|320665167|gb|EFX32260.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O157:H7 str.
LSU-61]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|218552986|ref|YP_002385899.1| thiamine biosynthesis protein ThiI [Escherichia coli IAI1]
gi|226703945|sp|B7M3R2|THII_ECO8A RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|218359754|emb|CAQ97295.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli IAI1]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|218549917|ref|YP_002383708.1| thiamine biosynthesis protein ThiI [Escherichia fergusonii ATCC
35469]
gi|226703948|sp|B7LMG4|THII_ESCF3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|218357458|emb|CAQ90097.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia fergusonii ATCC 35469]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|210615810|ref|ZP_03290791.1| hypothetical protein CLONEX_03009 [Clostridium nexile DSM 1787]
gi|210150146|gb|EEA81155.1| hypothetical protein CLONEX_03009 [Clostridium nexile DSM 1787]
Length = 362
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ SGG DSS + V ++
Sbjct: 2 EKKKVVVGMSGGVDSSVAAYLLKEEGYDVIGVT 34
>gi|195568773|ref|XP_002102388.1| GD19536 [Drosophila simulans]
gi|194198315|gb|EDX11891.1| GD19536 [Drosophila simulans]
Length = 419
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELM 64
+ +L +SGG D+S L W LD+ V + D GQ+ E + KK++ +
Sbjct: 3 KETVILAYSGGLDTSCILKWLLDKQYEVICVLADVGQKEDFTAAEKKALKIGAKKVI--V 60
Query: 65 PKWKDSLGEDHILPLAILGDI 85
K S ED+I P +G +
Sbjct: 61 ADVKQSFVEDYIWPAVQMGLV 81
>gi|170767956|ref|ZP_02902409.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
albertii TW07627]
gi|170123444|gb|EDS92375.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
albertii TW07627]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|170679960|ref|YP_001742560.1| thiamine biosynthesis protein ThiI [Escherichia coli SMS-3-5]
gi|215485504|ref|YP_002327935.1| thiamine biosynthesis protein ThiI [Escherichia coli O127:H6 str.
E2348/69]
gi|218698668|ref|YP_002406297.1| thiamine biosynthesis protein ThiI [Escherichia coli IAI39]
gi|312964555|ref|ZP_07778811.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 2362-75]
gi|226703944|sp|B7NJ74|THII_ECO7I RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|226703947|sp|B1LJH3|THII_ECOSM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|254784223|sp|B7UJP6|THII_ECO27 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|170517678|gb|ACB15856.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli SMS-3-5]
gi|215263576|emb|CAS07906.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli O127:H6 str. E2348/69]
gi|218368654|emb|CAR16393.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli IAI39]
gi|312290789|gb|EFR18666.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 2362-75]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|146097919|ref|XP_001468259.1| thiamine biosynthesis-like protein [Leishmania infantum]
gi|134072626|emb|CAM71341.1| thiamine biosynthesis-like protein [Leishmania infantum JPCM5]
gi|322502238|emb|CBZ37321.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 795
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 28/125 (22%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R V + F + + + ++I E
Sbjct: 219 PITPDQRVLALISGGIDSPVAAYRMMTRGCLVNGVHFL---NSTNDTASVMEKNRRICER 275
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNII----FLV 117
+ + L ++ + I + VP R +I L
Sbjct: 276 LSSVQGRLDMHYVDISTLQSQIVAN-------------------VPNHNRTLIYKWFMLS 316
Query: 118 FAATL 122
AA+
Sbjct: 317 LAASF 321
>gi|24111801|ref|NP_706311.1| thiamine biosynthesis protein ThiI [Shigella flexneri 2a str. 301]
gi|24050591|gb|AAN42018.1| putative oxidoreductase [Shigella flexneri 2a str. 301]
Length = 456
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|82542911|ref|YP_406858.1| thiamine biosynthesis protein ThiI [Shigella boydii Sb227]
gi|123560447|sp|Q325H8|THII_SHIBS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|81244322|gb|ABB65030.1| putative oxidoreductase [Shigella boydii Sb227]
gi|320186052|gb|EFW60797.1| Thiamine biosynthesis protein thiI [Shigella flexneri CDC 796-83]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|82775668|ref|YP_402015.1| thiamine biosynthesis protein ThiI [Shigella dysenteriae Sd197]
gi|309787016|ref|ZP_07681628.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
dysenteriae 1617]
gi|123563413|sp|Q32JI1|THII_SHIDS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|81239816|gb|ABB60526.1| putative oxidoreductase [Shigella dysenteriae Sd197]
gi|308924594|gb|EFP70089.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
dysenteriae 1617]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|74310992|ref|YP_309411.1| thiamine biosynthesis protein ThiI [Shigella sonnei Ss046]
gi|123746046|sp|Q3Z4Y6|THII_SHISS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|73854469|gb|AAZ87176.1| putative oxidoreductase [Shigella sonnei Ss046]
gi|323164214|gb|EFZ50021.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
sonnei 53G]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|30061917|ref|NP_836088.1| thiamine biosynthesis protein ThiI [Shigella flexneri 2a str.
2457T]
gi|110804445|ref|YP_687965.1| thiamine biosynthesis protein ThiI [Shigella flexneri 5 str. 8401]
gi|44888471|sp|Q83SG1|THII_SHIFL RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|122957624|sp|Q0T7G6|THII_SHIF8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|30040161|gb|AAP15894.1| putative oxidoreductase [Shigella flexneri 2a str. 2457T]
gi|110613993|gb|ABF02660.1| putative oxidoreductase [Shigella flexneri 5 str. 8401]
gi|281599755|gb|ADA72739.1| Thiamine biosynthesis protein thiI [Shigella flexneri 2002017]
gi|313646960|gb|EFS11417.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri 2a str. 2457T]
gi|332760703|gb|EGJ90991.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri 4343-70]
gi|332761713|gb|EGJ91992.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri 2747-71]
gi|332764300|gb|EGJ94536.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri K-671]
gi|332768528|gb|EGJ98711.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri 2930-71]
gi|333007913|gb|EGK27389.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri K-218]
gi|333008618|gb|EGK28086.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri VA-6]
gi|333010866|gb|EGK30292.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri K-272]
gi|333021365|gb|EGK40618.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri K-227]
gi|333022022|gb|EGK41267.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
flexneri K-304]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|26246429|ref|NP_752468.1| thiamine biosynthesis protein ThiI [Escherichia coli CFT073]
gi|91209492|ref|YP_539478.1| thiamine biosynthesis protein ThiI [Escherichia coli UTI89]
gi|117622683|ref|YP_851596.1| thiamine biosynthesis protein ThiI [Escherichia coli APEC O1]
gi|218557332|ref|YP_002390245.1| thiamine biosynthesis protein ThiI [Escherichia coli S88]
gi|218688286|ref|YP_002396498.1| thiamine biosynthesis protein ThiI [Escherichia coli ED1a]
gi|227884569|ref|ZP_04002374.1| thiamine biosynthesis protein ThiI [Escherichia coli 83972]
gi|237707583|ref|ZP_04538064.1| thiamine biosynthesis protein thiI [Escherichia sp. 3_2_53FAA]
gi|300988025|ref|ZP_07178505.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 45-1]
gi|301049624|ref|ZP_07196575.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 185-1]
gi|306813111|ref|ZP_07447304.1| thiamine biosynthesis protein ThiI [Escherichia coli NC101]
gi|331656478|ref|ZP_08357440.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TA206]
gi|29337058|sp|Q8FKB7|THII_ECOL6 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|122424764|sp|Q1RFB7|THII_ECOUT RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|189030628|sp|A1A892|THII_ECOK1 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|226703943|sp|B7MD81|THII_ECO45 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|254784225|sp|B7MQD8|THII_ECO81 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|26106827|gb|AAN79012.1|AE016756_195 Thiamine biosynthesis protein thiI [Escherichia coli CFT073]
gi|91071066|gb|ABE05947.1| thiamine biosynthesis protein ThiI [Escherichia coli UTI89]
gi|115511807|gb|ABI99881.1| thiamine biosynthesis protein ThiI [Escherichia coli APEC O1]
gi|218364101|emb|CAR01766.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli S88]
gi|218425850|emb|CAR06656.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli ED1a]
gi|222032218|emb|CAP74957.1| Thiamine biosynthesis protein thiI [Escherichia coli LF82]
gi|226898793|gb|EEH85052.1| thiamine biosynthesis protein thiI [Escherichia sp. 3_2_53FAA]
gi|227838655|gb|EEJ49121.1| thiamine biosynthesis protein ThiI [Escherichia coli 83972]
gi|294492376|gb|ADE91132.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli IHE3034]
gi|300298617|gb|EFJ55002.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 185-1]
gi|300407577|gb|EFJ91115.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 45-1]
gi|305853874|gb|EFM54313.1| thiamine biosynthesis protein ThiI [Escherichia coli NC101]
gi|307552328|gb|ADN45103.1| thiamine biosynthesis protein ThiI [Escherichia coli ABU 83972]
gi|307628108|gb|ADN72412.1| thiamine biosynthesis protein ThiI [Escherichia coli UM146]
gi|312945000|gb|ADR25827.1| thiamine biosynthesis protein ThiI [Escherichia coli O83:H1 str.
NRG 857C]
gi|315289862|gb|EFU49252.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 110-3]
gi|315294198|gb|EFU53549.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 153-1]
gi|315299589|gb|EFU58837.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 16-3]
gi|320197139|gb|EFW71756.1| Thiamine biosynthesis protein thiI [Escherichia coli WV_060327]
gi|323191341|gb|EFZ76604.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli RN587/1]
gi|323952965|gb|EGB48833.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H252]
gi|323958616|gb|EGB54319.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H263]
gi|324010101|gb|EGB79320.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 57-2]
gi|331054726|gb|EGI26735.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TA206]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|16128408|ref|NP_414957.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|89107293|ref|AP_001073.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli str. K-12 substr. W3110]
gi|170080009|ref|YP_001729329.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli str. K-12 substr. DH10B]
gi|218703706|ref|YP_002411225.1| thiamine biosynthesis protein ThiI [Escherichia coli UMN026]
gi|238899711|ref|YP_002925507.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli BW2952]
gi|256023960|ref|ZP_05437825.1| thiamine biosynthesis protein ThiI [Escherichia sp. 4_1_40B]
gi|293403543|ref|ZP_06647634.1| thiamine biosynthesis protein ThiI [Escherichia coli FVEC1412]
gi|298379155|ref|ZP_06989036.1| thiamine biosynthesis protein thiI [Escherichia coli FVEC1302]
gi|300900491|ref|ZP_07118658.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 198-1]
gi|300947926|ref|ZP_07162074.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 116-1]
gi|300957988|ref|ZP_07170153.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 175-1]
gi|301025690|ref|ZP_07189206.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 196-1]
gi|301647346|ref|ZP_07247158.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 146-1]
gi|307137066|ref|ZP_07496422.1| thiamine biosynthesis protein ThiI [Escherichia coli H736]
gi|331640941|ref|ZP_08342076.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H736]
gi|331661802|ref|ZP_08362725.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TA143]
gi|331671969|ref|ZP_08372765.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TA280]
gi|2501549|sp|P77718|THII_ECOLI RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|226703946|sp|B7N8X6|THII_ECOLU RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|229558679|sp|B1XF11|THII_ECODH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|259518547|sp|C4ZTI0|THII_ECOBW RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|1773107|gb|AAB40179.1| similar to M. jannaschii MG372 [Escherichia coli]
gi|1786625|gb|AAC73526.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|85674563|dbj|BAE76203.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli str. K12 substr. W3110]
gi|169887844|gb|ACB01551.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli str. K-12 substr. DH10B]
gi|218430803|emb|CAR11677.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli UMN026]
gi|238863607|gb|ACR65605.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli BW2952]
gi|260450390|gb|ACX40812.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli DH1]
gi|291429396|gb|EFF02416.1| thiamine biosynthesis protein ThiI [Escherichia coli FVEC1412]
gi|298280268|gb|EFI21772.1| thiamine biosynthesis protein thiI [Escherichia coli FVEC1302]
gi|299880002|gb|EFI88213.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 196-1]
gi|300315324|gb|EFJ65108.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 175-1]
gi|300355972|gb|EFJ71842.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 198-1]
gi|300452526|gb|EFK16146.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 116-1]
gi|301074491|gb|EFK89297.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 146-1]
gi|309700685|emb|CBI99981.1| thiamine biosynthesis protein ThiI [Escherichia coli ETEC H10407]
gi|315135105|dbj|BAJ42264.1| thiamine biosynthesis protein ThiI [Escherichia coli DH1]
gi|315616637|gb|EFU97254.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 3431]
gi|323938608|gb|EGB34857.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli E1520]
gi|323943229|gb|EGB39385.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli E482]
gi|331037739|gb|EGI09959.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H736]
gi|331060224|gb|EGI32188.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TA143]
gi|331070958|gb|EGI42317.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TA280]
gi|332341786|gb|AEE55120.1| thiamine biosynthesis protein ThiI [Escherichia coli UMNK88]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|15800153|ref|NP_286165.1| thiamine biosynthesis protein ThiI [Escherichia coli O157:H7
EDL933]
gi|15829731|ref|NP_308504.1| thiamine biosynthesis protein ThiI [Escherichia coli O157:H7 str.
Sakai]
gi|168749885|ref|ZP_02774907.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4113]
gi|168756965|ref|ZP_02781972.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4401]
gi|168761629|ref|ZP_02786636.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4501]
gi|168768374|ref|ZP_02793381.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4486]
gi|168776271|ref|ZP_02801278.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4196]
gi|168783289|ref|ZP_02808296.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4076]
gi|168786270|ref|ZP_02811277.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC869]
gi|168800306|ref|ZP_02825313.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC508]
gi|195938510|ref|ZP_03083892.1| thiamine biosynthesis protein ThiI [Escherichia coli O157:H7 str.
EC4024]
gi|208808957|ref|ZP_03251294.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4206]
gi|208815247|ref|ZP_03256426.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4045]
gi|208822980|ref|ZP_03263298.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4042]
gi|209397021|ref|YP_002269069.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4115]
gi|217325977|ref|ZP_03442061.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. TW14588]
gi|254791607|ref|YP_003076444.1| thiamine biosynthesis protein ThiI [Escherichia coli O157:H7 str.
TW14359]
gi|261223904|ref|ZP_05938185.1| sulfur transfer protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261256382|ref|ZP_05948915.1| sulfur transfer protein [Escherichia coli O157:H7 str. FRIK966]
gi|20140595|sp|Q8XE74|THII_ECO57 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|226726949|sp|B5Z3S9|THII_ECO5E RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|12513279|gb|AAG54773.1|AE005221_10 putative oxidoreductase [Escherichia coli O157:H7 str. EDL933]
gi|13359934|dbj|BAB33900.1| putative oxidoreductase [Escherichia coli O157:H7 str. Sakai]
gi|187768273|gb|EDU32117.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4196]
gi|188015859|gb|EDU53981.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4113]
gi|188999332|gb|EDU68318.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4076]
gi|189356012|gb|EDU74431.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4401]
gi|189362457|gb|EDU80876.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4486]
gi|189368047|gb|EDU86463.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4501]
gi|189373595|gb|EDU92011.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC869]
gi|189377419|gb|EDU95835.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC508]
gi|208728758|gb|EDZ78359.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4206]
gi|208731895|gb|EDZ80583.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4045]
gi|208737173|gb|EDZ84857.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4042]
gi|209158421|gb|ACI35854.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. EC4115]
gi|209743996|gb|ACI70305.1| putative oxidoreductase [Escherichia coli]
gi|209743998|gb|ACI70306.1| putative oxidoreductase [Escherichia coli]
gi|209744002|gb|ACI70308.1| putative oxidoreductase [Escherichia coli]
gi|217322198|gb|EEC30622.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli O157:H7 str. TW14588]
gi|254591007|gb|ACT70368.1| sulfur transfer protein [Escherichia coli O157:H7 str. TW14359]
gi|320192837|gb|EFW67477.1| Thiamine biosynthesis protein thiI [Escherichia coli O157:H7 str.
EC1212]
gi|326341185|gb|EGD64977.1| Thiamine biosynthesis protein thiI [Escherichia coli O157:H7 str.
1044]
gi|326346040|gb|EGD69779.1| Thiamine biosynthesis protein thiI [Escherichia coli O157:H7 str.
1125]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|88811454|ref|ZP_01126709.1| argininosuccinate synthase [Nitrococcus mobilis Nb-231]
gi|88791343|gb|EAR22455.1| argininosuccinate synthase [Nitrococcus mobilis Nb-231]
Length = 404
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W ++ + V T + D GQ ELE K +
Sbjct: 1 MSDVKKVVLAYSGGLDTSVILHWLVETYGCEVVTFTADLGQ--GEELEPARSKAKAFG-V 57
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 58 KQIYIEDLREEFVRD 72
>gi|194432608|ref|ZP_03064894.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
dysenteriae 1012]
gi|194419169|gb|EDX35252.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
dysenteriae 1012]
gi|320181595|gb|EFW56510.1| Thiamine biosynthesis protein thiI [Shigella boydii ATCC 9905]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|191166742|ref|ZP_03028569.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli B7A]
gi|193065188|ref|ZP_03046261.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli E22]
gi|194428860|ref|ZP_03061395.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli B171]
gi|209917636|ref|YP_002291720.1| thiamine biosynthesis protein ThiI [Escherichia coli SE11]
gi|218693883|ref|YP_002401550.1| thiamine biosynthesis protein ThiI [Escherichia coli 55989]
gi|256020390|ref|ZP_05434255.1| thiamine biosynthesis protein ThiI [Shigella sp. D9]
gi|260842621|ref|YP_003220399.1| sulfurtransferase [Escherichia coli O103:H2 str. 12009]
gi|260866581|ref|YP_003232983.1| sulfurtransferase [Escherichia coli O111:H- str. 11128]
gi|293418490|ref|ZP_06660925.1| thiamine biosynthesis protein thiI [Escherichia coli B088]
gi|300818252|ref|ZP_07098463.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 107-1]
gi|300820338|ref|ZP_07100490.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 119-7]
gi|300903312|ref|ZP_07121240.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 84-1]
gi|301301571|ref|ZP_07207706.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 124-1]
gi|307312202|ref|ZP_07591838.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli W]
gi|309794851|ref|ZP_07689272.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 145-7]
gi|331666773|ref|ZP_08367647.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TA271]
gi|331676091|ref|ZP_08376803.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H591]
gi|332281570|ref|ZP_08393983.1| thiamine biosynthesis protein thiI [Shigella sp. D9]
gi|226726950|sp|B6HZM6|THII_ECOSE RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|254784224|sp|B7L657|THII_ECO55 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|190903253|gb|EDV62975.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli B7A]
gi|192927162|gb|EDV81783.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli E22]
gi|194413163|gb|EDX29450.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli B171]
gi|209910895|dbj|BAG75969.1| thiamine biosynthesis protein ThiI [Escherichia coli SE11]
gi|218350615|emb|CAU96307.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli 55989]
gi|257757768|dbj|BAI29265.1| sulfurtransferase [Escherichia coli O103:H2 str. 12009]
gi|257762937|dbj|BAI34432.1| sulfurtransferase [Escherichia coli O111:H- str. 11128]
gi|291325018|gb|EFE64433.1| thiamine biosynthesis protein thiI [Escherichia coli B088]
gi|300404607|gb|EFJ88145.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 84-1]
gi|300527123|gb|EFK48192.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 119-7]
gi|300529143|gb|EFK50205.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 107-1]
gi|300843068|gb|EFK70828.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 124-1]
gi|306907704|gb|EFN38206.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli W]
gi|308121504|gb|EFO58766.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 145-7]
gi|315059700|gb|ADT74027.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Escherichia coli W]
gi|315256248|gb|EFU36216.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 85-1]
gi|320173759|gb|EFW48942.1| Thiamine biosynthesis protein thiI [Shigella dysenteriae CDC
74-1112]
gi|320201664|gb|EFW76240.1| Thiamine biosynthesis protein thiI [Escherichia coli EC4100B]
gi|323160470|gb|EFZ46418.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli E128010]
gi|323178313|gb|EFZ63891.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 1180]
gi|323184751|gb|EFZ70122.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 1357]
gi|323379734|gb|ADX52002.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli KO11]
gi|323945324|gb|EGB41380.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H120]
gi|324016721|gb|EGB85940.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 117-3]
gi|324116907|gb|EGC10820.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli E1167]
gi|331065997|gb|EGI37881.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TA271]
gi|331076149|gb|EGI47431.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H591]
gi|332103922|gb|EGJ07268.1| thiamine biosynthesis protein thiI [Shigella sp. D9]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|170021205|ref|YP_001726159.1| thiamine biosynthesis protein ThiI [Escherichia coli ATCC 8739]
gi|188493918|ref|ZP_03001188.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 53638]
gi|312970518|ref|ZP_07784699.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 1827-70]
gi|189030629|sp|B1J026|THII_ECOLC RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|169756133|gb|ACA78832.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli ATCC 8739]
gi|188489117|gb|EDU64220.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 53638]
gi|310337167|gb|EFQ02305.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 1827-70]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|191173532|ref|ZP_03035059.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli F11]
gi|300997390|ref|ZP_07181730.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 200-1]
gi|190906241|gb|EDV65853.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli F11]
gi|300304209|gb|EFJ58729.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 200-1]
gi|324010683|gb|EGB79902.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 60-1]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|157159945|ref|YP_001457263.1| thiamine biosynthesis protein ThiI [Escherichia coli HS]
gi|193068615|ref|ZP_03049576.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli E110019]
gi|194438886|ref|ZP_03070971.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 101-1]
gi|253774592|ref|YP_003037423.1| thiamine biosynthesis protein ThiI [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160489|ref|YP_003043597.1| thiamine biosynthesis protein ThiI [Escherichia coli B str. REL606]
gi|300930281|ref|ZP_07145694.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 187-1]
gi|189030627|sp|A7ZX76|THII_ECOHS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|157065625|gb|ABV04880.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli HS]
gi|192957978|gb|EDV88420.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli E110019]
gi|194422180|gb|EDX38182.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 101-1]
gi|242376201|emb|CAQ30892.1| thiI [Escherichia coli BL21(DE3)]
gi|253325636|gb|ACT30238.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972390|gb|ACT38061.1| thiamine biosynthesis protein ThiI [Escherichia coli B str. REL606]
gi|253976600|gb|ACT42270.1| thiamine biosynthesis protein ThiI [Escherichia coli BL21(DE3)]
gi|300461853|gb|EFK25346.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 187-1]
gi|323170505|gb|EFZ56155.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli LT-68]
gi|323963409|gb|EGB58971.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli H489]
gi|323972273|gb|EGB67483.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli TA007]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|157156951|ref|YP_001461606.1| thiamine biosynthesis protein ThiI [Escherichia coli E24377A]
gi|300924144|ref|ZP_07140136.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 182-1]
gi|301330715|ref|ZP_07223317.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 78-1]
gi|189030626|sp|A7ZIH7|THII_ECO24 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|157078981|gb|ABV18689.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli E24377A]
gi|300419597|gb|EFK02908.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 182-1]
gi|300843376|gb|EFK71136.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 78-1]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|187731644|ref|YP_001879133.1| thiamine biosynthesis protein ThiI [Shigella boydii CDC 3083-94]
gi|238689514|sp|B2U4M7|THII_SHIB3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|187428636|gb|ACD07910.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
boydii CDC 3083-94]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|323965106|gb|EGB60565.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli M863]
gi|327254745|gb|EGE66361.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli STEC_7v]
Length = 482
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 62/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + + R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VILKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
LA+ IG +D
Sbjct: 326 NLARQIGTEDFART 339
>gi|253567176|ref|ZP_04844626.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 3_2_5]
gi|251944007|gb|EES84526.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 3_2_5]
Length = 362
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 28/137 (20%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ + L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MKESKKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAARMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LV 117
+ + +K+++ ++ I + + PN V N +F
Sbjct: 59 YVADERVPFKNTIVKNFI-------------------DEYRQGRTPNPCVMC-NPLFKFR 98
Query: 118 FAATLAYRLGITNIVIG 134
A +LG I G
Sbjct: 99 MLIEWADKLGCDWIATG 115
>gi|238926764|ref|ZP_04658524.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Selenomonas flueggei ATCC 43531]
gi|238885296|gb|EEQ48934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Selenomonas flueggei ATCC 43531]
Length = 366
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 16/41 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
M + ++ SGG DSS + ++ V ++
Sbjct: 1 MVGQRMEKQRVVVAMSGGVDSSVTAALLQEQGYEVVGVTMR 41
>gi|195111878|ref|XP_002000503.1| GI10264 [Drosophila mojavensis]
gi|193917097|gb|EDW15964.1| GI10264 [Drosophila mojavensis]
Length = 417
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMPKW 67
+L +SGG D+S L W L++ V + D GQ+ E + ++ E ++
Sbjct: 4 EKVILAYSGGLDTSCILKWLLEQRYEVICVLADVGQQENFEAARQKALKIGAKEVIVADI 63
Query: 68 KDSLGEDHILPLAILGDI 85
K E +I P +G I
Sbjct: 64 KQQFAEQYIWPAIQMGLI 81
>gi|157813138|gb|ABV81314.1| putative GMP synthetase [Mastigoproctus giganteus]
Length = 196
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V + D G
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALKEDQVIAIHIDNG 80
>gi|170288158|ref|YP_001738396.1| tRNA(Ile)-lysidine synthetase [Thermotoga sp. RQ2]
gi|226695551|sp|B1L8R5|TILS_THESQ RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|170175661|gb|ACB08713.1| tRNA(Ile)-lysidine synthetase [Thermotoga sp. RQ2]
Length = 414
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 70/213 (32%), Gaps = 49/213 (23%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKK 59
++++ L+ SGG DS T L ++ D +++ R R+
Sbjct: 1 MLEEGEHVLVAVSGGIDSMTLLYVLRKFSPLLKIKITAAHLD----HRIRESSRRD-REF 55
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + +W + + ++ D + + +A +++ + L T
Sbjct: 56 VERICRQWNIPVETSEVDVPSLWKDSGKT--LEEIAREVRYDFLKRT------------- 100
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHT 170
A ++G + I + + D + + + G
Sbjct: 101 ---AKKVGASKIALAHHKNDL----------LETVVHRLIRGTGPLGLACISPKREEFIR 147
Query: 171 PLMWLKKYETWKLAQDIGGQDLVN---LILEES 200
P + K+ E + A++ G +V+ ++ +
Sbjct: 148 PFLVFKRSEIEEYAREKGVPYVVDETNYDVKYT 180
>gi|119575283|gb|EAW54888.1| hCG40893, isoform CRA_c [Homo sapiens]
Length = 403
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
+D + S +L +SG D+S L W ++ V + GQ+ E E R K
Sbjct: 5 SDAMSTKGSVVLAYSGSLDTSCTLLWLKEQGYDVIAYLANIGQKEDFE-EARKNALK 60
>gi|19111975|ref|NP_595183.1| argininosuccinate synthase (predicted) [Schizosaccharomyces pombe
972h-]
gi|6685242|sp|O94354|ASSY_SCHPO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|3947869|emb|CAA22280.1| argininosuccinate synthase (predicted) [Schizosaccharomyces
pombe]
Length = 410
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+ ++ +L +SGG D+S L+W ++ V + GQ + + + K+
Sbjct: 1 MPQEVKRCVLAYSGGLDTSCILAWLIEEGWEVICYMANVGQ--EEDWDAAREKALKVGAK 58
Query: 63 --LMPKWKDSLGEDHILPLAILGDISHS 88
+ ++ D ++P A I +
Sbjct: 59 KVYVEDLREEFINDTVIPAAQANAIYEN 86
>gi|262306053|gb|ACY45619.1| gln amidotransferase [Heterometrus spinifer]
Length = 196
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V + D G
Sbjct: 43 NNRVLMLVSGGVDSTVCAALLHKALKEDQVIAIHIDNG 80
>gi|257094644|ref|YP_003168285.1| Argininosuccinate synthase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047168|gb|ACV36356.1| Argininosuccinate synthase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 409
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+ A+L +SGG D+S L W D + V T + D GQ +++E ++ I
Sbjct: 1 MSDIKKAVLAYSGGLDTSVILKWLQDTYGCEVVTFTADLGQGDELEAARPKALQFGIAPE 60
Query: 63 --LMPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 NIYIEDLREEFVRDYVFPM 79
>gi|167624988|ref|YP_001675282.1| thiamine biosynthesis protein ThiI [Shewanella halifaxensis
HAW-EB4]
gi|189030649|sp|B0TQ31|THII_SHEHH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|167355010|gb|ABZ77623.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
halifaxensis HAW-EB4]
Length = 484
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVE 62
+ L L SGG DS + R R F+ G ++++ + +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEI----------GVKQ 224
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ GE H + + + + + +I + + + R + + A +
Sbjct: 225 VAYHLWQKYGESHKVKFISVPF---DPVVQEILERIDNGQMG--VILKR--MMMRAATRV 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++GI +V G S T+ + I+ E + PL+ + K +
Sbjct: 278 AQKMGIQALVTGEAMGQVSS------QTLTNLN-VIDRCTEQ--LILRPLIAMDKQDIIN 328
Query: 183 LAQDIGGQDLVNLILEES 200
L++ IG +D I E
Sbjct: 329 LSRQIGTEDFAKSIPEYC 346
>gi|134298155|ref|YP_001111651.1| argininosuccinate synthase [Desulfotomaculum reducens MI-1]
gi|172044248|sp|A4J173|ASSY_DESRM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|134050855|gb|ABO48826.1| argininosuccinate synthase [Desulfotomaculum reducens MI-1]
Length = 401
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK---VELECRLCVRKKIVELM 64
P +L +SGG D+S ++W + + V ++ D GQ + +E + KI +
Sbjct: 2 PKVVLAYSGGLDTSVIIAWLKENYGYEVIAVTADLGQGEELAPLEEKALQSGASKI--YI 59
Query: 65 PKWKDSLGEDHILPLAILGDI 85
+ ED+I P G I
Sbjct: 60 EDLRKEFVEDYIWPTLKAGAI 80
>gi|330502363|ref|YP_004379232.1| argininosuccinate synthase [Pseudomonas mendocina NK-01]
gi|328916649|gb|AEB57480.1| argininosuccinate synthase [Pseudomonas mendocina NK-01]
Length = 405
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQALGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|313848263|emb|CBY17264.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|328914942|gb|AEB55775.1| MesJ/Ycf62 family protein, putative [Chlamydophila psittaci 6BC]
Length = 297
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 33/176 (18%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
S LL SGG DS L R + DYG R E +++ +
Sbjct: 1 MKKSYLLALSGGSDSLFLLYLLKSRGVSFTAVHVDYGWR-----ESSYREAEELKLRCQE 55
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLV-FAAT 121
L +H+ ++ + ++ NL IFL A
Sbjct: 56 EGVPLIVNHVPSKDKTSKDPENAARRYRYELFYKICREENLA--------GIFLAHHAND 107
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
A + + ++ G + G + + + + PL+ + K
Sbjct: 108 QAETV-LKRVLEGAHLGNLKG--------------MTSEASYNGIPLLRPLLHIPK 148
>gi|298243232|ref|ZP_06967039.1| argininosuccinate synthase [Ktedonobacter racemifer DSM 44963]
gi|297556286|gb|EFH90150.1| argininosuccinate synthase [Ktedonobacter racemifer DSM 44963]
Length = 435
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 15 FSGGQDSSTC--LSWALDRFDRVETLSFDYGQ 44
FSGG DS+ C L+ A ++ +S D GQ
Sbjct: 43 FSGGLDSTLCVKLAEAKYHASKLYAISVDVGQ 74
>gi|291320347|ref|YP_003515609.1| tRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
[Mycoplasma agalactiae]
gi|290752680|emb|CBH40653.1| TRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
[Mycoplasma agalactiae]
Length = 374
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ +L SGG DSS C L + VE L
Sbjct: 1 MFNKKKVILGMSGGVDSSVCAYLLLKQGFEVEGL 34
>gi|78221430|ref|YP_383177.1| argininosuccinate synthase [Geobacter metallireducens GS-15]
gi|119361277|sp|Q39Z72|ASSY_GEOMG RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|78192685|gb|ABB30452.1| argininosuccinate synthase [Geobacter metallireducens GS-15]
Length = 406
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
M + K +L +SGG D+S L W + + V S D GQ
Sbjct: 1 MAKVHKDVKKIVLAYSGGLDTSIILKWLKNEYGCEVIAFSADLGQ 45
>gi|37679527|ref|NP_934136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio vulnificus YJ016]
gi|61217310|sp|Q7MLT4|MNMA_VIBVY RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|37198271|dbj|BAC94107.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Vibrio vulnificus YJ016]
Length = 374
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+D +K ++ SGG DSS + +VE L + + + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMK---NWEEDDDSEYCTAAED 55
Query: 61 VELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 56 LADAQAVCDKLGIHLHKINFA 76
>gi|27366203|ref|NP_761731.1| tRNA-specific 2-thiouridylase MnmA [Vibrio vulnificus CMCP6]
gi|30173408|sp|Q8CWJ6|MNMA_VIBVU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|27362403|gb|AAO11258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio vulnificus CMCP6]
Length = 374
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+D +K ++ SGG DSS + +VE L + + + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMK---NWEEDDDSEYCTAAED 55
Query: 61 VELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 56 LADAQAVCDKLGIHLHKINFA 76
>gi|329770388|ref|ZP_08261770.1| tRNA-specific 2-thiouridylase mnmA [Gemella sanguinis M325]
gi|328836511|gb|EGF86171.1| tRNA-specific 2-thiouridylase mnmA [Gemella sanguinis M325]
Length = 370
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS ++ V +
Sbjct: 1 MSNGKKVVVGMSGGVDSSVTAYLLKEQGYDVIGV 34
>gi|303247671|ref|ZP_07333941.1| N-acetyl sugar amidotransferase [Desulfovibrio fructosovorans JJ]
gi|302490943|gb|EFL50840.1| N-acetyl sugar amidotransferase [Desulfovibrio fructosovorans JJ]
Length = 389
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 33/84 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K+ ++ SGG DS+ L A+ R + FD G +++ + +++ +
Sbjct: 65 KSYDCVVGVSGGVDSTYTLFKAVSLGLRPLAVHFDNGWDSEIAVHNIENATRRLGVELYT 124
Query: 67 WKDSLGEDHILPLAILGDISHSSL 90
+ L ++ L + +
Sbjct: 125 HVVDWDDFRRLQISFLKASTSDAE 148
>gi|242398043|ref|YP_002993467.1| GMP synthase [glutamine-hydrolyzing] subunit B [Thermococcus
sibiricus MM 739]
gi|242264436|gb|ACS89118.1| GMP synthase [glutamine-hydrolyzing] subunit B [Thermococcus
sibiricus MM 739]
Length = 313
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYG 43
A++ SGG DSST A DR+ + + G
Sbjct: 25 EKKAIIALSGGVDSSTAAILAYKAIGDRLHAVFVNTG 61
>gi|146306426|ref|YP_001186891.1| argininosuccinate synthase [Pseudomonas mendocina ymp]
gi|166221009|sp|A4XS43|ASSY_PSEMY RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|145574627|gb|ABP84159.1| argininosuccinate synthase [Pseudomonas mendocina ymp]
Length = 405
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQALGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|296272288|ref|YP_003654919.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Arcobacter nitrofigilis DSM 7299]
gi|296096463|gb|ADG92413.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Arcobacter nitrofigilis DSM 7299]
Length = 376
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 23/136 (16%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQR-----NKVELECRLCVRKK 59
++ SGG DSS + V L YG + N++E E V +
Sbjct: 12 KKKVVVGMSGGVDSSVTALLLKQQGYDVIGLFMRNWEYGIKGSQCPNRIEFEDAKKVGEL 71
Query: 60 I-VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
I +E++ K + + + G + ++ + N +FL
Sbjct: 72 IGIEVLGKDFVEEYRTKVFDVFLEGLKKGLTPNPDILCNREIKF---------N-VFLN- 120
Query: 119 AATLAYRLGITNIVIG 134
A ++G I G
Sbjct: 121 ---EAKKMGADVIATG 133
>gi|269925434|ref|YP_003322057.1| argininosuccinate synthase [Thermobaculum terrenum ATCC BAA-798]
gi|269789094|gb|ACZ41235.1| argininosuccinate synthase [Thermobaculum terrenum ATCC BAA-798]
Length = 417
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 16/132 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K L +SGG DS+ CL +++ + + ++ D GQ + VE
Sbjct: 14 VPKYRKVALAYSGGLDSALCLVLLREKYGAEEIIPITVDVGQ------------GQDEVE 61
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
K + LG + +L + + ++ LTK + N P + R +I A
Sbjct: 62 QSFKKAEVLGVEPLL-IDAKSEFTNEWLTKAIRANSSYNGYPVSTSMTRQLI-AAKVAQK 119
Query: 123 AYRLGITNIVIG 134
A LG + G
Sbjct: 120 AVELGCDALAEG 131
>gi|146300143|ref|YP_001194734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Flavobacterium johnsoniae UW101]
gi|205816863|sp|A5FHA9|MNMA_FLAJO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|146154561|gb|ABQ05415.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Flavobacterium johnsoniae UW101]
Length = 395
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLQQQGYEVIGL 31
>gi|254294555|ref|YP_003060578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hirschia baltica ATCC 49814]
gi|254043086|gb|ACT59881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hirschia baltica ATCC 49814]
Length = 409
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
+ + SGG DS+ + V ++ Y ++ + C + I +
Sbjct: 37 RSETRVVAAMSGGVDSTVVAALLHHAGYDVVGVTLQLYDHGAALKKQGACCAGQDIHDAR 96
Query: 65 PKWKDSLGEDHILP 78
++L
Sbjct: 97 RACDALGIPHYVLD 110
>gi|225375405|ref|ZP_03752626.1| hypothetical protein ROSEINA2194_01030 [Roseburia inulinivorans DSM
16841]
gi|225212741|gb|EEG95095.1| hypothetical protein ROSEINA2194_01030 [Roseburia inulinivorans DSM
16841]
Length = 393
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 59/199 (29%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R ++ F + +K +
Sbjct: 175 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVTIDATYF-----HAPPYTSERAKQKVVDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ K+ + + I I + + + ++ + A
Sbjct: 230 KIVAKYSGPINLHVVNFTDIQLYIYEQCPHEELTIIMRRY-------------MMKLAEH 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A ++ G + + +++ + V+ PL+ K E
Sbjct: 277 FAKENKCLGLITGESIGQVAS---------QTMQSLAATNEVCTMPVYRPLIGFDKQEIV 327
Query: 182 KLAQDIGGQDLVNLILEES 200
+++ I + L E+
Sbjct: 328 TISEKIDAYETSILPYEDC 346
>gi|147678886|ref|YP_001213101.1| GMP synthase [Pelotomaculum thermopropionicum SI]
gi|146274983|dbj|BAF60732.1| hypothetical GMP synthase [Pelotomaculum thermopropionicum SI]
Length = 513
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 62/191 (32%), Gaps = 32/191 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL SGG DSS DR+ + ++G K E V+K E
Sbjct: 220 RALCALSGGVDSSVAAVLVHRAVGDRLTCVFVNHGLLRKGE---AEQVQKTFKEKFKMNL 276
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ L ++ + + I + + +F AA L
Sbjct: 277 IYVDARR----RFLSRLAGVTDPEMKRKIIGEEFIR---------VFEDQAAALGQV--- 320
Query: 129 TNIVIGVCETDYSGYPD------CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+V G + YPD I++ L + + PL WL K E +
Sbjct: 321 DFLVQG------TLYPDVVESGTATAAVIKSHHNVGCLPGDMRFGLVEPLRWLFKDEVRE 374
Query: 183 LAQDIGGQDLV 193
L +++G + V
Sbjct: 375 LGEEMGLPEEV 385
>gi|323141405|ref|ZP_08076296.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain
[Phascolarctobacterium sp. YIT 12067]
gi|322414154|gb|EFY04982.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain
[Phascolarctobacterium sp. YIT 12067]
Length = 517
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 10 SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYG--QRNKVELECRL 54
L SGG DSS C + A ++ + D+G ++N+ E C +
Sbjct: 220 KVLCALSGGVDSSVCAAMLAKAIGKQLTCVFVDHGLLRKNEREEVCAV 267
>gi|288958853|ref|YP_003449194.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Azospirillum sp. B510]
gi|288911161|dbj|BAI72650.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Azospirillum sp. B510]
Length = 391
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 44/145 (30%), Gaps = 20/145 (13%)
Query: 1 MNDI-IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
MN + + K P ++ SGG DSS + + V ++ Y ++ C
Sbjct: 1 MNSLGLSKRPQDTRVVVAMSGGVDSSVTAAVLREEGYDVVGITLQLYDHGLALQKPGACC 60
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVP 109
+ I + ++L + + A P N V
Sbjct: 61 AGQDIYDARQVADRIGIPHYVLD---YEGRFSQDVMDDFADSYLRGETPIPCVRCNQRVK 117
Query: 110 GRNIIFLVFAATLAYRLGITNIVIG 134
R+++ A LG + G
Sbjct: 118 FRDLL------NTARDLGADALATG 136
>gi|326336750|ref|ZP_08202918.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691220|gb|EGD33191.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 396
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 10/30 (33%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS V +
Sbjct: 2 KRVVVGLSGGVDSSVAAYLLQREGYEVIGI 31
>gi|257413240|ref|ZP_04742446.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseburia intestinalis L1-82]
gi|257204162|gb|EEV02447.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseburia intestinalis L1-82]
gi|291539633|emb|CBL12744.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseburia intestinalis XB6B4]
Length = 363
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
M + A ++ SGG DSS ++ V ++
Sbjct: 1 MEKRMA-AKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVT 38
>gi|282162868|ref|YP_003355253.1| argininosuccinate synthase [Methanocella paludicola SANAE]
gi|282155182|dbj|BAI60270.1| argininosuccinate synthase [Methanocella paludicola SANAE]
Length = 393
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE--LM 64
+L +SGG D+S C+ + + D+V T++ D GQ E+E K I +
Sbjct: 2 KKVVLAYSGGLDTSVCIPILKENYGFDKVITVTVDVGQ-PAGEIETASKKAKLIADKHYT 60
Query: 65 PKWKDSLGEDHILP 78
KD D+I P
Sbjct: 61 MDAKDEFVRDYIFP 74
>gi|226322606|ref|ZP_03798124.1| hypothetical protein COPCOM_00378 [Coprococcus comes ATCC 27758]
gi|225208943|gb|EEG91297.1| hypothetical protein COPCOM_00378 [Coprococcus comes ATCC 27758]
Length = 359
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 3 KKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVT 34
>gi|295402096|ref|ZP_06812056.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus thermoglucosidasius C56-YS93]
gi|294975878|gb|EFG51496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus thermoglucosidasius C56-YS93]
Length = 370
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS V +
Sbjct: 2 KKKRVVVGMSGGVDSSVAAYLLKQEGYDVIGV 33
>gi|312109803|ref|YP_003988119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. Y4.1MC1]
gi|311214904|gb|ADP73508.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. Y4.1MC1]
Length = 370
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS V +
Sbjct: 2 KKKRVVVGMSGGVDSSVAAYLLKQEGYDVIGV 33
>gi|239828143|ref|YP_002950767.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus sp. WCH70]
gi|239808436|gb|ACS25501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. WCH70]
Length = 370
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS V +
Sbjct: 2 KKKRVVVGMSGGVDSSVAAYLLKQEGYDVIGV 33
>gi|114776946|ref|ZP_01451989.1| argininosuccinate synthase [Mariprofundus ferrooxydans PV-1]
gi|114553032|gb|EAU55463.1| argininosuccinate synthase [Mariprofundus ferrooxydans PV-1]
Length = 407
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL-MPK 66
A+L +SGG D+S LSW + +D V T + D GQ ++VE + + +
Sbjct: 7 KKAVLAYSGGLDTSIILSWLQNTYDCEVVTFTADLGQGDEVEDARAKAKAGGVSSIYIED 66
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D++ P+ I ++
Sbjct: 67 LREEFVRDYVFPMFRANAIYEGEYLLGTSIA 97
>gi|56419544|ref|YP_146862.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus kaustophilus
HTA426]
gi|81347762|sp|Q5L186|MNMA1_GEOKA RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|56379386|dbj|BAD75294.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Geobacillus kaustophilus HTA426]
Length = 370
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS V +
Sbjct: 2 KKKRVVVGMSGGVDSSVAAYLLKQEGYDVIGV 33
>gi|304313061|ref|YP_003812659.1| Probable tRNA
5-methylaminomethyl-2-thiouridylate-methyltransferase
[gamma proteobacterium HdN1]
gi|301798794|emb|CBL47027.1| Probable tRNA
5-methylaminomethyl-2-thiouridylate-methyltransferase
[gamma proteobacterium HdN1]
Length = 387
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS L VE L
Sbjct: 1 MSHPKKVIVGMSGGVDSSVAAWLLLQEGYEVEGL 34
>gi|284162129|ref|YP_003400752.1| GMP synthase, large subunit [Archaeoglobus profundus DSM 5631]
gi|284012126|gb|ADB58079.1| GMP synthase, large subunit [Archaeoglobus profundus DSM 5631]
Length = 304
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 58/192 (30%), Gaps = 41/192 (21%)
Query: 10 SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSS C A DR+ + D G + E E + + + K
Sbjct: 23 KAIIALSGGVDSSVCAVLAYKAIGDRLIPVFVDTGLMREGEPERIKEIFGHMGLVFVDAK 82
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + + + I + +F+ +A
Sbjct: 83 EE----------FFKALKGVTDPEEKRKIIGE-------------LFVRIFERVAEEHKA 119
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAI-------ETAINLGMESHVTVHTPLMWLKKYETW 181
++ G + YPD I ++ V PL L K E
Sbjct: 120 DYLIQG------TIYPD----IIESMGGIKSHHNVGGFPTKYKFKGVIEPLRELYKDEVR 169
Query: 182 KLAQDIGGQDLV 193
++A+ +G +
Sbjct: 170 EVARYLGLPKEI 181
>gi|262306081|gb|ACY45633.1| gln amidotransferase [Neogonodactylus oerstedii]
Length = 197
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG-QRNKVELECRLCVRK 58
+ L+L SGG DS+ C + AL D+V + D G R L+ +RK
Sbjct: 43 SNKVLMLVSGGVDSTVCAALLHKALSE-DQVIAVHIDNGFMRKNESLQVEQSLRK 96
>gi|237751996|ref|ZP_04582476.1| tRNA methyltransferase [Helicobacter winghamensis ATCC BAA-430]
gi|229376563|gb|EEO26654.1| tRNA methyltransferase [Helicobacter winghamensis ATCC BAA-430]
Length = 325
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 21/128 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKIVELMPK 66
AL LFSGG DS + D V L + G +R+K E+ +R+++ ++ +
Sbjct: 2 KALALFSGGLDSLLAIKIIKDMGVDVLALHLNIGFGAKRDKSEI-----LRQRLDQIGVE 56
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K + N + N A +
Sbjct: 57 LKIVDIRKQFFDDVLFKPKFGYGKYFNPCIDCHAN-------------MFSHALGMLESE 103
Query: 127 GITNIVIG 134
G + ++ G
Sbjct: 104 GASFVISG 111
>gi|156551429|ref|XP_001604269.1| PREDICTED: similar to gmp synthase [Nasonia vitripennis]
Length = 710
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
LLL SGG DS+ C + D+V + + G
Sbjct: 240 NSKVLLLVSGGVDSTVCAALLHKALNKDQVIAVHINNG 277
>gi|150403081|ref|YP_001330375.1| hypothetical protein MmarC7_1158 [Methanococcus maripaludis C7]
gi|150034111|gb|ABR66224.1| conserved hypothetical protein [Methanococcus maripaludis C7]
Length = 195
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMP 65
A +LFSGG+DSS + ++ ++ ++G R+ E + K+ L
Sbjct: 2 KAHVLFSGGKDSSLSAIILHNLGYEIQLVTVNFGVLDSYRHAEETAKIIGYSHKVESLDK 61
Query: 66 KWKDS 70
+ +
Sbjct: 62 ELIEK 66
>gi|152979406|ref|YP_001345035.1| thiamine biosynthesis protein ThiI [Actinobacillus succinogenes
130Z]
gi|189030613|sp|A6VQ53|THII_ACTSZ RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|150841129|gb|ABR75100.1| thiamine biosynthesis/tRNA modification protein ThiI
[Actinobacillus succinogenes 130Z]
Length = 484
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 29/191 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLG-----------GAAHEIGVK 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ + G H + I+ ++ + KI + + V R + + A
Sbjct: 222 QMVYHLWNRYGSSHKVR---FIAINFEAVVGEILEKIDNGQMG--VVLKR--MMVRAAGK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R I IV G S + + + + V PL+ K +
Sbjct: 275 VAQRFAIEAIVTGEALGQVSS---------QTLTNLRLIDEAAGTLVLRPLITHDKEQII 325
Query: 182 KLAQDIGGQDL 192
+A+ IG +D+
Sbjct: 326 AMAKQIGTEDI 336
>gi|331269731|ref|YP_004396223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum BKT015925]
gi|329126281|gb|AEB76226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum BKT015925]
Length = 346
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 58/201 (28%), Gaps = 48/201 (23%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ SGG DSS ++ + ++ + E K
Sbjct: 1 MNKKVAIGLSGGVDSSVAAYLLKEKGYDLIGITM-------------KVSDVDVSEDAAK 47
Query: 67 WKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFA 119
+ L HIL L D + + N A + P N ++ + L
Sbjct: 48 VAEKLDIPYHILDL---RDEFKNRVIDNFAEEYLQGRTPNPCAMCNKYIKF--GVLLE-- 100
Query: 120 ATLAYRLGITNIVIGVCE--TDYSG-YP---------DCRHDTIRAIETAINLGMESHVT 167
A LG I G +++G Y D + + +
Sbjct: 101 --KAKELGADYIATGHYARVEEHNGRYLVLNAKDDKKDQTYMFYSLTQDVLK-------H 151
Query: 168 VHTPLMWLKKYETWKLAQDIG 188
+ P K + ++A+++G
Sbjct: 152 ILMPCGEYTKVQIREIARNLG 172
>gi|315920277|ref|ZP_07916517.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694152|gb|EFS30987.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 361
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MEERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAVRMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHI 76
+ + +K+++ ++ I
Sbjct: 59 YVADERIPFKETIVKNFI 76
>gi|262306015|gb|ACY45600.1| gln amidotransferase [Armadillidium vulgare]
Length = 197
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ L+L SGG DS+ C + D+V + D G K E++ +K+
Sbjct: 42 SSNKVLMLVSGGVDSTVCAALLRKALTEDQVIAVHIDNGFLRKKEVQQVEESLQKL 97
>gi|154323444|ref|XP_001561036.1| hypothetical protein BC1G_00121 [Botryotinia fuckeliana B05.10]
gi|150842350|gb|EDN17543.1| hypothetical protein BC1G_00121 [Botryotinia fuckeliana B05.10]
Length = 405
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
A + L +SGG D+S L+W +++ V D GQ + + E KI +
Sbjct: 1 MAKDKVCLAYSGGLDTSCILAWLIEKGYDVVCFMADVGQ--EEDFEAAKAKAMKIGAVA 57
>gi|254570633|ref|XP_002492426.1| Arginosuccinate synthetase [Pichia pastoris GS115]
gi|46981799|gb|AAT07966.1| arginino succinate synthase [Pichia pastoris]
gi|238032224|emb|CAY70217.1| Arginosuccinate synthetase [Pichia pastoris GS115]
gi|328353559|emb|CCA39957.1| argininosuccinate synthase [Pichia pastoris CBS 7435]
Length = 415
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W L++ V + GQ + + E KI
Sbjct: 1 MSKGK--VCLAYSGGLDTSIILAWLLEQGYEVVAFLANIGQ--EEDFEAAREKALKIGA 55
>gi|13508289|ref|NP_110239.1| thiamin biosynthesis protein [Mycoplasma pneumoniae M129]
gi|2501551|sp|P75228|THII_MYCPN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|1673963|gb|AAB95940.1| Thiamin biosynthesis protein [Mycoplasma pneumoniae M129]
gi|301633604|gb|ADK87158.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
pneumoniae FH]
Length = 387
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+AL L SGG DS S L R V+ ++F
Sbjct: 181 TALALLSGGIDSPVAASLVLQRGFNVDFITF 211
>gi|312136736|ref|YP_004004073.1| gmp synthase (glutamine-hydrolyzing) [Methanothermus fervidus DSM
2088]
gi|311224455|gb|ADP77311.1| GMP synthase (glutamine-hydrolyzing) [Methanothermus fervidus DSM
2088]
Length = 308
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 13/110 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE------------CRL 54
A++ SGG DSS A DR+ + ++G + E + +
Sbjct: 21 KSKAIIALSGGVDSSVTAFLAKKALGDRLIAVFVNHGLLREGEAKEIRKFFKDKLNFRYV 80
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
K+ ++ + KD + I+ + + ++ +Q P
Sbjct: 81 DASKRFLDALKGVKDPEKKRKIISKVFIEIFEEVAREEDAKYLLQGTIAP 130
>gi|300023996|ref|YP_003756607.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525817|gb|ADJ24286.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hyphomicrobium denitrificans ATCC 51888]
Length = 397
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 5/74 (6%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS + V ++ +D+G + C C + I +
Sbjct: 14 KKRVVVAMSGGVDSSVAAAIMKAAGHDVIGVTLQLYDHGSATGRKGSC--CAGQDIHDAR 71
Query: 65 PKWKDSLGEDHILP 78
++L
Sbjct: 72 RVADALGIPHYVLD 85
>gi|192358816|ref|YP_001983984.1| thiamine biosynthesis protein ThiI [Cellvibrio japonicus Ueda107]
gi|190684981|gb|ACE82659.1| thiazole biosynthesis protein ThiI [Cellvibrio japonicus Ueda107]
Length = 491
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 65/178 (36%), Gaps = 27/178 (15%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDS 70
L L SGG DS+ + R R F+ G R +++ + E+ +
Sbjct: 183 LSLISGGFDSTVSTYLCIKRGLRAHYCFFNLGGRAHEI----------GVKEVAYYLWNK 232
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
G H + + + + + K+ + + T R + L A +A L I
Sbjct: 233 YGASHRVKFVTVPF---EEVVREILEKVDNAYMGVTL--KR--MMLRAAEKVAESLEIPA 285
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+V G S + AI+ AI++ V PL + K + +++ IG
Sbjct: 286 LVTGESVAQVSS---QTLINLNAIDRAIDML------VLRPLATMDKGDIIDISRKIG 334
>gi|170758983|ref|YP_001788227.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A3 str. Loch Maree]
gi|205810606|sp|B1KZJ2|MNMA2_CLOBM RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|169405972|gb|ACA54383.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A3 str. Loch Maree]
Length = 353
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K AL SGG DSS +R V + D R++ E C + +
Sbjct: 1 MSKGIVALA-MSGGVDSSVSAYILKERGYEVIGIYMDLW-RDEREEYCNKSAAEDARRVA 58
Query: 65 PKWKDSLGEDHILPLA 80
K HI+ +
Sbjct: 59 EKLDIPF---HIINIG 71
>gi|123968948|ref|YP_001009806.1| hypothetical protein A9601_14151 [Prochlorococcus marinus str.
AS9601]
gi|123199058|gb|ABM70699.1| Hypothetical protein A9601_14151 [Prochlorococcus marinus str.
AS9601]
Length = 370
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYG------QRN 46
++ SGG DSST L A + R + D G QRN
Sbjct: 66 IVGVSGGLDSSTVLIKAKELGLRCLAVHMDNGWDEPLSQRN 106
>gi|78043170|ref|YP_361010.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Carboxydothermus hydrogenoformans Z-2901]
gi|123575599|sp|Q3AA24|MNMA_CARHZ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|77995285|gb|ABB14184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Carboxydothermus hydrogenoformans Z-2901]
Length = 365
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS + L++ V ++
Sbjct: 6 RKKVLVAMSGGVDSSVTAALLLEQGYEVVGVT 37
>gi|83591327|ref|YP_431336.1| hypothetical protein Moth_2511 [Moorella thermoacetica ATCC 39073]
gi|83574241|gb|ABC20793.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 271
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 40/186 (21%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMP 65
S L+ +SGG DSS L A +V ++ Y Q E+E + +++
Sbjct: 21 ESILVAYSGGVDSSLLLKVASTTPVKVLAVTAASSTYPQ---AEIEAATRLARELG---- 73
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ ++ + + + + +F LA
Sbjct: 74 ------VQHMVINTNEMDNPEFCANPPERCYHCKKE------------LFATL-QELARE 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
G+ IV G D R D + A G++S + L K + +LA+
Sbjct: 115 HGLKAIVDGANADD-------RSDFRPGSQAAREYGVKSPLQ----EAGLTKDDIRQLAR 163
Query: 186 DIGGQD 191
+G +
Sbjct: 164 HLGLPN 169
>gi|187933232|ref|YP_001885369.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum B str.
Eklund 17B]
gi|205813703|sp|B2THM7|MNMA_CLOBB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|187721385|gb|ACD22606.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum B str. Eklund 17B]
Length = 361
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMP 65
L+ SGG DSS ++ V + Q E+E R C VE
Sbjct: 5 KKKVLVGMSGGVDSSVAAYLLKEQGYEVIGATMQIWQ-EDKEVEEREGGCCSLSAVEDAR 63
Query: 66 KWKDSLGE 73
+ D L
Sbjct: 64 RVCDKLDI 71
>gi|172038551|ref|YP_001805052.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. ATCC 51142]
gi|171700005|gb|ACB52986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cyanothece sp. ATCC 51142]
Length = 367
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 32/138 (23%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS + + V L+ GQ C + +V+
Sbjct: 14 KKVVVGLSGGVDSSVAAASLHHQGYDVIGLTLWLMKGKGQ----------CCSEGMVDAA 63
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNII----FL 116
+ HI+ L + + N + ++ + T +P R + L
Sbjct: 64 FICEQLGVPHHIVDTRELFE----ANIINYLVSGYESGV--TPLPCSQCNR-AVKFGPML 116
Query: 117 VFAATLAYRLGITNIVIG 134
+A L I G
Sbjct: 117 AYAK---EELNCDRIATG 131
>gi|225388352|ref|ZP_03758076.1| hypothetical protein CLOSTASPAR_02087 [Clostridium asparagiforme
DSM 15981]
gi|225045595|gb|EEG55841.1| hypothetical protein CLOSTASPAR_02087 [Clostridium asparagiforme
DSM 15981]
Length = 361
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ + ++ SGG DSS + RV ++
Sbjct: 1 MSEEKKTVVVGMSGGVDSSVAAYLLKQQGYRVIGVT 36
>gi|167626771|ref|YP_001677271.1| argininosuccinate synthase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596772|gb|ABZ86770.1| Argininosuccinate synthase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 418
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 15/127 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
LLL+SGG D+S L W + + V L+ D GQ +E + + ++ +
Sbjct: 20 RCLLLYSGGLDTSVMLKWIQEEYGVEVVALTIDIGQVADNLEQIKQKAINLGAIDAVVYD 79
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ ++ S Q +T + GR +I A +A +
Sbjct: 80 AKDRFANEVI-----------SKAIKANADYQGGYALSTPL-GR-VIISEIAVEVAKKYD 126
Query: 128 ITNIVIG 134
+ G
Sbjct: 127 CQVVAHG 133
>gi|297584733|ref|YP_003700513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus selenitireducens MLS10]
gi|297143190|gb|ADH99947.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus selenitireducens MLS10]
Length = 371
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETL 38
MN+ + + +++ SGG DSS ++ V +
Sbjct: 1 MNNEKRPEDTRIVVGMSGGVDSSVTAHLLKEQGYEVIGI 39
>gi|15894062|ref|NP_347411.1| PP family ATPase [Clostridium acetobutylicum ATCC 824]
gi|15023660|gb|AAK78751.1|AE007592_12 ATP-utilizing enzyme of the PP-loop superfamily [Clostridium
acetobutylicum ATCC 824]
gi|325508189|gb|ADZ19825.1| ATP-utilizing enzyme of the PP-loop superfamily [Clostridium
acetobutylicum EA 2018]
Length = 271
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 45/199 (22%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K +L FSGG DS+ L A D V+ ++ +
Sbjct: 14 LKSLGKVVLAFSGGVDSTFLL-KASKEALGDNVKAVTI-------------------LSP 53
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAAT 121
+PKW+ E+ + L + +I + + ++ +D L T V
Sbjct: 54 YIPKWEIREAEELVKELGVEHEIIKAPIIDSIKFNPEDRCYLCKTAV-------FSMILD 106
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYE 179
A R G ++ G D Y R +RA+ ++V +PL+ L K E
Sbjct: 107 AAKRQGYDCVIDGTNFDDIKDY---RPG-LRAL---------KELSVKSPLLECKLTKAE 153
Query: 180 TWKLAQDIGGQDLVNLILE 198
++++G +
Sbjct: 154 IRTFSKELGLKTWDKPPYA 172
>gi|329909731|ref|ZP_08275115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oxalobacteraceae bacterium IMCC9480]
gi|327546403|gb|EGF31411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oxalobacteraceae bacterium IMCC9480]
Length = 369
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + ++ V L
Sbjct: 2 SKKKVVIGLSGGVDSSVSAALLKEQGYEVIGL 33
>gi|319779509|ref|YP_004130422.1| Argininosuccinate synthase [Taylorella equigenitalis MCE9]
gi|317109533|gb|ADU92279.1| Argininosuccinate synthase [Taylorella equigenitalis MCE9]
Length = 406
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +L +SGG D+S L W D + V T + D GQ ++E R K ++
Sbjct: 1 MSEYKKVVLAYSGGLDTSVILKWLQDTYNCEVITFTADIGQGEELE-PARAKALKFGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 EHIFIDDLKEEFVKD 74
>gi|265767771|ref|ZP_06095303.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
gi|263252443|gb|EEZ23971.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
Length = 362
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 26/136 (19%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKK 59
+ + L+ SGG DS+ ++ + ++ D Q + EL R+ +
Sbjct: 1 MKESKKRVLVGMSGGIDSTATCMMLQEQGYEIVGVTMRVWGDEPQDAR-ELAARMGIEHY 59
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LVF 118
+ + +K+++ ++ I + + PN V N +F
Sbjct: 60 VADERVPFKNTIVKNFI-------------------DEYRQGRTPNPCVMC-NPLFKFRM 99
Query: 119 AATLAYRLGITNIVIG 134
A +LG I G
Sbjct: 100 LIEWADKLGCDWIATG 115
>gi|15895501|ref|NP_348850.1| tRNA-specific 2-thiouridylase MnmA [Clostridium acetobutylicum
ATCC 824]
gi|24638326|sp|Q97GY2|MNMA_CLOAB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|15025232|gb|AAK80190.1|AE007723_8 TRNA 5-methylaminomethyl-2-thiouridylate)-methyltransferase,
PP-loop ATPase [Clostridium acetobutylicum ATCC 824]
gi|325509648|gb|ADZ21284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium acetobutylicum EA 2018]
Length = 355
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MNKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVT 33
>gi|113474569|ref|YP_720630.1| tRNA-specific 2-thiouridylase MnmA [Trichodesmium erythraeum
IMS101]
gi|123352667|sp|Q118B7|MNMA_TRIEI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|110165617|gb|ABG50157.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Trichodesmium erythraeum IMS101]
Length = 359
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 32/137 (23%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSST + + +VE L+ GQ C + +V+
Sbjct: 3 KIIVGLSGGVDSSTAAAILHHQGYQVEGLTLWLMKGKGQ----------CCSEGMVDAAY 52
Query: 66 KWKDSLGEDHILPLAILGD--------ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ HI+ L +S+ + + + F P L
Sbjct: 53 ICEQLDIPHHIVDTRNLFQANIVDYLVTGYSAGITPLPCSQCNKTVK--FGP-----MLA 105
Query: 118 FAATLAYRLGITNIVIG 134
+ +LGI I G
Sbjct: 106 YGR---EKLGIDKIATG 119
>gi|227874682|ref|ZP_03992843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mobiluncus mulieris ATCC 35243]
gi|227844725|gb|EEJ54873.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mobiluncus mulieris ATCC 35243]
Length = 394
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DS+ + L++ V
Sbjct: 1 MSKKVIIGLSGGVDSAVAAARLLEQGYDVHAF 32
>gi|289208445|ref|YP_003460511.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thioalkalivibrio sp. K90mix]
gi|288944076|gb|ADC71775.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thioalkalivibrio sp. K90mix]
Length = 373
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 46/134 (34%), Gaps = 13/134 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ ++ SGG DS+ S L+ RVE L + + + C + E+
Sbjct: 1 MSGPERVIVGLSGGVDSAVAASRLLEAGYRVEGLFMK---NWEDDDDAEYCAAEADFEMA 57
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ L L A + + ++ + + PN P R I F F
Sbjct: 58 REVAACLEIP--LHKANFAEDYRQRVFRHFLHEYEAGRTPN---PDILCNREIKFRSF-L 111
Query: 121 TLAYRLGITNIVIG 134
A +LG I G
Sbjct: 112 DHARQLGAQWIATG 125
>gi|167644970|ref|YP_001682633.1| tRNA-specific 2-thiouridylase MnmA [Caulobacter sp. K31]
gi|205811623|sp|B0SWD8|MNMA_CAUSK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|167347400|gb|ABZ70135.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caulobacter sp. K31]
Length = 409
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 1 MNDIIKKAPSALLL---------FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL 50
M+ +++A +A+ L SGG DS+ + V ++ Y +
Sbjct: 21 MDRAVEQARAAVGLPVGTRIVAAMSGGVDSTVTAALLAKAGYDVVGVTLQLYDHGAAITK 80
Query: 51 ECRLCVRKKIVELMPKWKDSLGEDHILP 78
+ C + I++ + ++L
Sbjct: 81 KGACCAGQDILDARMAAERIGIPHYVLD 108
>gi|302392703|ref|YP_003828523.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acetohalobium arabaticum DSM 5501]
gi|302204780|gb|ADL13458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acetohalobium arabaticum DSM 5501]
Length = 361
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + V ++
Sbjct: 8 RVVVAMSGGVDSSLAAAILKKEGYEVIGIT 37
>gi|254419496|ref|ZP_05033220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brevundimonas sp. BAL3]
gi|196185673|gb|EDX80649.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brevundimonas sp. BAL3]
Length = 400
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 33/154 (21%)
Query: 1 MNDIIKKAPSALLL---------FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL 50
M+ ++ A +A+ L SGG DS+ + V ++ Y ++
Sbjct: 18 MDAAVESARAAVGLPVGARVVAAMSGGVDSTVVAALLHKAGYDVVGVTLQLYDHGAALKK 77
Query: 51 ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP 109
+ C + I + + ++L S V + D+ L T VP
Sbjct: 78 KGACCAGQDIHDARLAAEMIGIPHYVLDY-------ESRFKDAVIDQFADSYLKGQTPVP 130
Query: 110 ---------GRNIIFLVFAATLAYRLGITNIVIG 134
R+++ +A LG + G
Sbjct: 131 CIRCNQTVKFRDLL------DVARDLGAEAMATG 158
>gi|170028584|ref|XP_001842175.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876297|gb|EDS39680.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1322
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 39/217 (17%)
Query: 1 MNDIIKKAPSALLLF-SGGQDSSTCLSWALDRF--DRVETLSFDYG-QRNKVELECRLCV 56
MN ++++L SGG DS+ C + + ++V + D G R +
Sbjct: 860 MNLGASATTTSVILLVSGGVDSTVCAALLRNALKPEQVIAVHIDNGFMRKNESAAVEKSL 919
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNI 113
R+ V+L+ + + + G + + + ++ + + + + FV N
Sbjct: 920 RELGVDLLVRDAFYKFTRGTTTIKVPGSLYNQDTPMLCQTISPEDKRKIIGDVFVKVSNE 979
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE-----------------T 156
+ L + + R D I +
Sbjct: 980 VLKDL------NLNAEEVFLAQGTL--------RPDLIESASSLVSTKADTIKTHHNDTE 1025
Query: 157 AINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
I E+ + PL K E +L ++G +
Sbjct: 1026 LIRKLREAGRVIE-PLQEFHKDEVRQLGYELGLPAHL 1061
>gi|86608667|ref|YP_477429.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123502696|sp|Q2JM78|MNMA_SYNJB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|86557209|gb|ABD02166.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 368
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
P + SGG DSST + ++ VE ++ + C + +V+
Sbjct: 17 RPRIVAALSGGVDSSTVAALLQEQGYAVEGVTL------WLMRGKGQCCTEGLVDAAAVC 70
Query: 68 KDSLGEDHILPLAILGD 84
+ H++ L
Sbjct: 71 EQLGIPHHVVDSRELFQ 87
>gi|301156306|emb|CBW15777.1| sulfurtransferase required for thiamine and 4-thiouridine
biosynthesis [Haemophilus parainfluenzae T3T1]
Length = 483
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMAYH 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + G + + K+ + + V R + + A+ +A
Sbjct: 227 IWNRYSSSHKVRFIAIPFEGVVG------EILEKVDNGQMG--VVLKR--MMVRSASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFDIQAIVTGEALGQVSS---------QTLTNLRLIDEAADALVLRPLITHDKEQIITM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|152989325|ref|YP_001347006.1| argininosuccinate synthase [Pseudomonas aeruginosa PA7]
gi|166221007|sp|A6V1S1|ASSY_PSEA7 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|150964483|gb|ABR86508.1| argininosuccinate synthase [Pseudomonas aeruginosa PA7]
Length = 405
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKARAMGVREI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|16125150|ref|NP_419714.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caulobacter crescentus CB15]
gi|14195261|sp|P58074|MNMA_CAUCR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|13422162|gb|AAK22882.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caulobacter crescentus CB15]
Length = 383
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 3/81 (3%)
Query: 1 MNDIIKKAPSA--LLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVR 57
M + A + SGG DS+ + V ++ Y + + C
Sbjct: 1 MRAAVGLPEGARIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAG 60
Query: 58 KKIVELMPKWKDSLGEDHILP 78
+ I++ + ++L
Sbjct: 61 QDILDARMAAERIGIPHYVLD 81
>gi|332638407|ref|ZP_08417270.1| argininosuccinate synthase [Weissella cibaria KACC 11862]
Length = 407
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 36/196 (18%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI---VEL 63
+L +SGG D+S + W ++ V + D GQ + +L+ ++ +
Sbjct: 1 MQEKLVLAYSGGLDTSVAIPWLKEKRYAVTAVVLDVGQ-HGKDLDFIKAKALQVGAEASI 59
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ D++ P+ + A+ + + +A
Sbjct: 60 LLDAKEEFATDYVAPVIQGNLLYEGEYPLVSALSRP--------------LIIKKLVEIA 105
Query: 124 YRLGITNIVIGV--CETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+++G T I G D E AI+ + ++ + P+ + W
Sbjct: 106 HQIGATTIAHGSTGHGNDQV-----------RFEAAIH-AFDPNLKIEAPIRDFQ----W 149
Query: 182 KLAQDIGGQDLVNLIL 197
++I D ++ +
Sbjct: 150 SREEEIAYADAHHVPI 165
>gi|188588033|ref|YP_001920516.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum E3 str.
Alaska E43]
gi|251778087|ref|ZP_04821007.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|205813690|sp|B2V3V9|MNMA_CLOBA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|188498314|gb|ACD51450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum E3 str. Alaska E43]
gi|243082402|gb|EES48292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 361
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMP 65
L+ SGG DSS ++ V + Q E+E R C VE
Sbjct: 5 KKKVLVGMSGGVDSSVAAYLLKEQGYEVIGATMQIWQ-EDKEVEEREGGCCSLSAVEDAR 63
Query: 66 KWKDSLGE 73
+ D L
Sbjct: 64 RVCDKLDI 71
>gi|20808849|ref|NP_624020.1| argininosuccinate synthase [Thermoanaerobacter tengcongensis MB4]
gi|24211498|sp|Q8R7C2|ASSY_THETN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|20517502|gb|AAM25624.1| Argininosuccinate synthase [Thermoanaerobacter tengcongensis MB4]
Length = 410
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+ K +L +SGG D+S + W + ++ + + D GQR + + +
Sbjct: 1 MLKGEKVVLAYSGGLDTSVIIPWLKENYECEIIAVCVDVGQREDLRYIKDKALASGASKV 60
Query: 63 LMPKWKDSLGEDHILPLAILGDI 85
+ K+ +D+I P G I
Sbjct: 61 YIEDVKEEFVKDYIFPTLKAGAI 83
>gi|325265024|ref|ZP_08131751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium sp. D5]
gi|324029714|gb|EGB91002.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium sp. D5]
Length = 356
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 14/83 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVE-----------LECRLC 55
++ SGG DSS ++ V ++ Q R E + R
Sbjct: 3 KVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDRAVQEENGGCCGLSAVEDARRV 62
Query: 56 VRKKIVELMPKWKDSLGEDHILP 78
+ + ++H++
Sbjct: 63 AAELEIPYYVMNFKQEFKEHVID 85
>gi|311895757|dbj|BAJ28165.1| putative glutamine-dependent NAD(+) synthetase [Kitasatospora setae
KM-6054]
Length = 581
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRF--DRVETLSF--DYGQRNKV----ELECRLCV 56
K ++L+ SGG DS+ + A+D + V +S Y ++ EL R +
Sbjct: 320 KNGMRSVLIGLSGGIDSALVAAIAVDAIGAENVYGVSMPSRYSSQHSRDDAAELARRTGL 379
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ V + P + LG + LA S T +A+ Q+ +
Sbjct: 380 HFRTVSIAPMFDAYLGATELTGLAEENLQSRLRGTLLMAISNQEGQI 426
>gi|294155486|ref|YP_003559870.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma crocodyli MP145]
gi|291599923|gb|ADE19419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma crocodyli MP145]
Length = 372
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KKKVVIGMSGGVDSSVAAYLLKEQGYEVIGL 33
>gi|221632485|ref|YP_002521706.1| glutamine-dependent NAD(+) synthetase [Thermomicrobium roseum DSM
5159]
gi|221157196|gb|ACM06323.1| glutamine-dependent NAD(+) synthetase [Thermomicrobium roseum DSM
5159]
Length = 586
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 8/102 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSF--DYGQRNKVELECRLCVRKKIVELM 64
+A++ SGG DSS A D + V LS Y R+ +E + R + +
Sbjct: 329 RTAVIGLSGGIDSSLTACIAADALGPENVTGLSMPSRYSSRHSIE-DAEELARNLGIRFL 387
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT 106
+ + H + +L + + +VA + + T
Sbjct: 388 IVPIEPV---HRVFREVLAPLGNQPEEPDVADENLQARIRGT 426
>gi|195396114|ref|XP_002056677.1| GJ11071 [Drosophila virilis]
gi|194143386|gb|EDW59789.1| GJ11071 [Drosophila virilis]
Length = 417
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMPKW 67
+L +SGG D+S L W L++ V + D GQ+ E + ++ E ++
Sbjct: 4 EKVILAYSGGLDTSCILKWLLEQRYEVICVLADVGQQEDFEAARQKALKIGAKEVIVADI 63
Query: 68 KDSLGEDHILPLAILGDI 85
K + E +I P +G I
Sbjct: 64 KRNFAEQYIWPAIQMGLI 81
>gi|77165411|ref|YP_343936.1| hypothetical protein Noc_1944 [Nitrosococcus oceani ATCC 19707]
gi|254433729|ref|ZP_05047237.1| hypothetical protein NOC27_660 [Nitrosococcus oceani AFC27]
gi|76883725|gb|ABA58406.1| hypothetical protein Noc_1944 [Nitrosococcus oceani ATCC 19707]
gi|207090062|gb|EDZ67333.1| hypothetical protein NOC27_660 [Nitrosococcus oceani AFC27]
Length = 581
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 23/124 (18%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
S G DS T L++ V +F GQ E+ + +++ +K
Sbjct: 243 LSAGLDSRTALAYLQRAGVEVSFYTF--GQPGSTEVIGAQSIAQRVGCSTRLFK------ 294
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+P A D + T +Q + +++ R ++ +VIG
Sbjct: 295 --IPDASWNDWETNIQTLGAIGPLQQSGWAHSW---RAML----------ANKADAVVIG 339
Query: 135 VCET 138
Sbjct: 340 YLGD 343
>gi|303243807|ref|ZP_07330147.1| GMP synthase, large subunit [Methanothermococcus okinawensis IH1]
gi|302485743|gb|EFL48667.1| GMP synthase, large subunit [Methanothermococcus okinawensis IH1]
Length = 310
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 63/194 (32%), Gaps = 40/194 (20%)
Query: 8 APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A++ SGG DSS DR+ + D G K E E KI +
Sbjct: 21 NKKAIIALSGGVDSSVAAVLTYRAIGDRLLAVFVDTGLMRKNEAEE----IYKIFKENMG 76
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + L L +S + + GR +F+ +A
Sbjct: 77 LNLKIIDAKDIFLKELKGVSDPEQKRKII--------------GR--LFIEVFEEVAKEN 120
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRA-------IETAINLGMESHVTVHTPLMWLKKYE 179
G +V G D I + A+ GM + V PL L K E
Sbjct: 121 GEEVLVQGTIA----------PDWIESEGAIKTHHNIALPSGMV--LEVVEPLRELYKDE 168
Query: 180 TWKLAQDIGGQDLV 193
LA+++G D V
Sbjct: 169 VRILAKELGLPDNV 182
>gi|260173564|ref|ZP_05759976.1| putative cell-cycle protein [Bacteroides sp. D2]
gi|315921832|ref|ZP_07918072.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. D2]
gi|313695707|gb|EFS32542.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. D2]
Length = 426
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 58/196 (29%), Gaps = 43/196 (21%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+ SGG DS L E ++ R K E + +++ E M
Sbjct: 20 DKILVALSGGADSVALLYILHTAGYHCEAAHCNFHLRGK-ESDRDELFVRQLCERMEIHL 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYRLG 127
H + + + K++++++ L + R
Sbjct: 79 ------HTIDFNT----TQYATEKHISIEMAARELRYQWFEKIR------------KECQ 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
+ + + D I I + G + T+ PL+ + +
Sbjct: 117 ADVVAVAHHQDDS----------IETILLNLIRGTGITGLLGIRPRNGTIVRPLLCINRE 166
Query: 179 ETWKLAQDIGGQDLVN 194
E + Q+IG + +
Sbjct: 167 EIIRYLQNIGQDYVTD 182
>gi|195344025|ref|XP_002038591.1| GM10539 [Drosophila sechellia]
gi|194133612|gb|EDW55128.1| GM10539 [Drosophila sechellia]
Length = 400
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELM 64
+ +L +SGG D+S L W LD+ V + D GQ+ E + KK++ +
Sbjct: 3 TETVILAYSGGLDTSCILKWLLDKQYEVICVLADVGQKEDFTAAEKKALKIGAKKVI--V 60
Query: 65 PKWKDSLGEDHILPLAILGDI 85
K S ED+I P +G +
Sbjct: 61 ADVKQSFVEDYIWPAVQMGLV 81
>gi|160886327|ref|ZP_02067330.1| hypothetical protein BACOVA_04336 [Bacteroides ovatus ATCC 8483]
gi|156108212|gb|EDO09957.1| hypothetical protein BACOVA_04336 [Bacteroides ovatus ATCC 8483]
Length = 426
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 58/196 (29%), Gaps = 43/196 (21%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+ SGG DS L E ++ R K E + +++ E M
Sbjct: 20 DKILVALSGGADSVALLYILHTAGYHCEAAHCNFHLRGK-ESDRDELFVRQLCERMEIHL 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYRLG 127
H + + + K++++++ L + R
Sbjct: 79 ------HTIDFNT----TQYATEKHISIEMAARELRYQWFEKIR------------KECQ 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
+ + + D I I + G + T+ PL+ + +
Sbjct: 117 ADVVAVAHHQDDS----------IETILLNLIRGTGITGLLGIRPRNGTIVRPLLCINRE 166
Query: 179 ETWKLAQDIGGQDLVN 194
E + Q+IG + +
Sbjct: 167 EIIRYLQNIGQDYVTD 182
>gi|56708497|ref|YP_170393.1| asparagine synthase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110670968|ref|YP_667525.1| asparagine synthase [Francisella tularensis subsp. tularensis
FSC198]
gi|134301500|ref|YP_001121468.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
subsp. tularensis WY96-3418]
gi|224457661|ref|ZP_03666134.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
subsp. tularensis MA00-2987]
gi|254371123|ref|ZP_04987125.1| asparagine synthase [Francisella tularensis subsp. tularensis
FSC033]
gi|254875345|ref|ZP_05248055.1| wbtH, asparagine synthase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|45434710|gb|AAS60272.1| glutamine amidotransferase [Francisella tularensis subsp.
tularensis]
gi|56604989|emb|CAG46089.1| asparagine synthase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110321301|emb|CAL09472.1| asparagine synthase [Francisella tularensis subsp. tularensis
FSC198]
gi|134049277|gb|ABO46348.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
subsp. tularensis WY96-3418]
gi|151569363|gb|EDN35017.1| asparagine synthase [Francisella tularensis subsp. tularensis
FSC033]
gi|254841344|gb|EET19780.1| wbtH, asparagine synthase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159707|gb|ADA79098.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
subsp. tularensis NE061598]
Length = 628
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 15 FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+T ++ D++ T S + Q+ E E V K I
Sbjct: 271 LSGGIDSTTVVALMQSMSKDKINTFSIGFNQKEYNEAEHARAVAKHI 317
>gi|330832713|ref|YP_004401538.1| thiamine biosynthesis protein [Streptococcus suis ST3]
gi|329306936|gb|AEB81352.1| thiamine biosynthesis protein [Streptococcus suis ST3]
Length = 405
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS AL R +E L F
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF 209
>gi|302023686|ref|ZP_07248897.1| thiamine biosynthesis protein ThiI [Streptococcus suis 05HAS68]
Length = 356
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS AL R +E L F
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF 209
>gi|262306101|gb|ACY45643.1| gln amidotransferase [Scutigera coleoptrata]
Length = 197
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V + D G
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALKDDQVIAVHIDNG 80
>gi|262375961|ref|ZP_06069192.1| argininosuccinate synthase [Acinetobacter lwoffii SH145]
gi|262309055|gb|EEY90187.1| argininosuccinate synthase [Acinetobacter lwoffii SH145]
Length = 446
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + + + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEAYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGMP 101
>gi|253755704|ref|YP_003028844.1| thiamine biosynthesis protein [Streptococcus suis BM407]
gi|251818168|emb|CAZ55966.1| putative thiamine biosynthesis protein [Streptococcus suis BM407]
Length = 405
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS AL R +E L F
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF 209
>gi|223934227|ref|ZP_03626161.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
suis 89/1591]
gi|223897108|gb|EEF63535.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
suis 89/1591]
Length = 405
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS AL R +E L F
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF 209
>gi|188585551|ref|YP_001917096.1| argininosuccinate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350238|gb|ACB84508.1| argininosuccinate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 404
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLC 55
+ K +L +SGG D+S + W +++D V + D GQ+ VE +
Sbjct: 1 MSKINKVVLAYSGGLDTSVAIKWIQEQYDCEVIAMIGDVGQKEDVEAAEQKA 52
>gi|162148152|ref|YP_001602613.1| tRNA-specific 2-thiouridylase MnmA [Gluconacetobacter
diazotrophicus PAl 5]
gi|205816818|sp|A9HMI3|MNMA_GLUDA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|161786729|emb|CAP56312.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 361
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 34/123 (27%), Gaps = 5/123 (4%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ SGG DSS + + V + Y R + C + I +
Sbjct: 5 VAMSGGVDSSVVAARLVAEGHEVVGATLQLYDSRESA-RKGACCAGRDIHDARRVADRLG 63
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+++ S+ + A P V + +A LG +
Sbjct: 64 IPHYVID---AETRFRQSVIETFADAYAGGETPVPCVACNQGVKFTDLLGIARDLGAEAM 120
Query: 132 VIG 134
G
Sbjct: 121 ATG 123
>gi|146318431|ref|YP_001198143.1| thiamine biosynthesis protein ThiI [Streptococcus suis 05ZYH33]
gi|146320623|ref|YP_001200334.1| thiamine biosynthesis protein ThiI [Streptococcus suis 98HAH33]
gi|253751569|ref|YP_003024710.1| thiamine biosynthesis protein [Streptococcus suis SC84]
gi|253753470|ref|YP_003026611.1| thiamine biosynthesis protein [Streptococcus suis P1/7]
gi|189030667|sp|A4W0P5|THII_STRS2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|189030669|sp|A4VUF4|THII_STRSY RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|145689237|gb|ABP89743.1| Thiamine biosynthesis ATP pyrophosphatase [Streptococcus suis
05ZYH33]
gi|145691429|gb|ABP91934.1| Thiamine biosynthesis ATP pyrophosphatase [Streptococcus suis
98HAH33]
gi|251815858|emb|CAZ51468.1| putative thiamine biosynthesis protein [Streptococcus suis SC84]
gi|251819716|emb|CAR45551.1| putative thiamine biosynthesis protein [Streptococcus suis P1/7]
gi|292558219|gb|ADE31220.1| Thiamine biosynthesis protein [Streptococcus suis GZ1]
gi|319758003|gb|ADV69945.1| thiamine biosynthesis protein ThiI [Streptococcus suis JS14]
Length = 405
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS AL R +E L F
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF 209
>gi|84501069|ref|ZP_00999304.1| GMP synthase [Oceanicola batsensis HTCC2597]
gi|84391136|gb|EAQ03554.1| GMP synthase [Oceanicola batsensis HTCC2597]
Length = 523
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 64/190 (33%), Gaps = 31/190 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DSS + + + + + D+G RL +++V +
Sbjct: 227 KVICALSGGVDSSVAAALLHEAIGENLTCVFVDHG-------LLRLNEAEEVVGMFRDHM 279
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-G 127
+ LG + S + I GR +F+ A ++ G
Sbjct: 280 NLSVIHAQEQELFLGALEGVSDPETKRKTI-----------GR--LFIDVFQKYADQIEG 326
Query: 128 ITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ G D +SG P TI++ L + + + PL L K E
Sbjct: 327 ARFLAQGTLYPDVIESVSFSGGP---SVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVR 383
Query: 182 KLAQDIGGQD 191
L +++G D
Sbjct: 384 TLGRELGLPD 393
>gi|307565061|ref|ZP_07627574.1| tRNA(Ile)-lysidine synthetase [Prevotella amnii CRIS 21A-A]
gi|307346230|gb|EFN91554.1| tRNA(Ile)-lysidine synthetase [Prevotella amnii CRIS 21A-A]
Length = 456
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 46/139 (33%), Gaps = 24/139 (17%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ K L+ SGG DS + L ++ + C +R +
Sbjct: 13 QLLNKEKCYLVALSGGADSVSLLLILHQLGYKINAVH------------CNFKLRGEESY 60
Query: 63 LMPKWKDSLGEDHILPLAILG-DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ L H +PL + D + + + +++++ L T+
Sbjct: 61 RDEQFCIDLCNRHDIPLKRIHFDTTEYASLRKISIEMAARELRYTYFEQ----------- 109
Query: 122 LAYRLGITNIVIGVCETDY 140
L + + +G + D
Sbjct: 110 LRKSINAEGVCVGHHQEDS 128
>gi|269977689|ref|ZP_06184653.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mobiluncus mulieris 28-1]
gi|269934117|gb|EEZ90687.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mobiluncus mulieris 28-1]
Length = 394
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DS+ + L++ V
Sbjct: 1 MSKKVIIGLSGGVDSAVAAARLLEQGYDVHAF 32
>gi|261749175|ref|YP_003256860.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Blattabacterium sp. (Periplaneta americana) str.
BPLAN]
gi|261497267|gb|ACX83717.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Blattabacterium sp. (Periplaneta americana) str.
BPLAN]
Length = 394
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + V L
Sbjct: 2 QKKRVVVGLSGGVDSSVAALLLKKQGYEVIGL 33
>gi|24211518|sp|Q8ZU97|ASSY_PYRAE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
Length = 397
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 16/129 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
A +L +SGG D++ + W ++F V T++ D GQ + ++E R +
Sbjct: 3 ASKIVLAYSGGLDTTVAVKWLSEKFGAEVYTVTVDVGQEDDFSKIEERAYKAGAVQHFYI 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
K E++I ++ + A+ V A R
Sbjct: 63 DAKREFAEEYIARAILMNGMYEGVYPLGTALARPLIAAKVVEV--------------ARR 108
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 109 LGADAVAHG 117
>gi|332525693|ref|ZP_08401842.1| tRNA-specific 2-thiouridylase MnmA [Rubrivivax benzoatilyticus
JA2]
gi|332109252|gb|EGJ10175.1| tRNA-specific 2-thiouridylase MnmA [Rubrivivax benzoatilyticus
JA2]
Length = 363
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ ++ SGG DS+ + V L
Sbjct: 1 MQGKRRVVVGLSGGVDSAVSAWLLKQQGYEVVGL 34
>gi|326930372|ref|XP_003211321.1| PREDICTED: argininosuccinate synthase-like [Meleagris gallopavo]
Length = 382
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + + +L +SGG D+S L W ++ V + GQ+ E RKK + L
Sbjct: 1 MAEPRDTVVLAYSGGLDTSCILVWLKEQGYTVIAFLANIGQK-----EDFDAARKKALAL 55
Query: 64 MPK 66
+
Sbjct: 56 GAE 58
>gi|291531960|emb|CBK97545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium siraeum 70/3]
Length = 358
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
A++ SGG DSS R ++
Sbjct: 1 MNNKAVIAMSGGVDSSVAAYLMKQRGFDCIGVT 33
>gi|54293769|ref|YP_126184.1| hypothetical protein lpl0825 [Legionella pneumophila str. Lens]
gi|61216435|sp|Q5WYB4|TILS_LEGPL RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|53753601|emb|CAH15059.1| hypothetical protein lpl0825 [Legionella pneumophila str. Lens]
Length = 431
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRNKVEL 50
+K+ ++ FSGG DS+ L ++++ + ++G QR+ +L
Sbjct: 14 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLYNQLLAVHINHGISGNSLNWQRHCEQL 70
>gi|306817970|ref|ZP_07451707.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mobiluncus mulieris ATCC 35239]
gi|304649238|gb|EFM46526.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mobiluncus mulieris ATCC 35239]
Length = 394
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DS+ + L++ V
Sbjct: 1 MSKKVIIGLSGGVDSAVAAARLLEQGYDVHAF 32
>gi|224537479|ref|ZP_03678018.1| hypothetical protein BACCELL_02358 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520917|gb|EEF90022.1| hypothetical protein BACCELL_02358 [Bacteroides cellulosilyticus
DSM 14838]
Length = 350
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 43/133 (32%), Gaps = 17/133 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K LL SGG DSS D V ++F + + ++
Sbjct: 1 MKSKERVLLGMSGGTDSSVAAMRLQDAGYEVTGVTFRF---------YEKDGATEYLDDA 51
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP---GRNIIFLVFAAT 121
LG +HI ++ S + + + + P VP N + A
Sbjct: 52 RALASRLGIEHI--TYDAREMFRSRIIRYFIDEYLAGHTP---VPCTLCNNELKWTLLAK 106
Query: 122 LAYRLGITNIVIG 134
+A GI I G
Sbjct: 107 IADEKGIYWISTG 119
>gi|218132832|ref|ZP_03461636.1| hypothetical protein BACPEC_00693 [Bacteroides pectinophilus ATCC
43243]
gi|217991705|gb|EEC57709.1| hypothetical protein BACPEC_00693 [Bacteroides pectinophilus ATCC
43243]
Length = 396
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 61/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A+LL SGG DS R +++ F + ++K+V+L
Sbjct: 179 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVKIDATYF-----HAPPYTSE-RAKQKVVDL 232
Query: 64 MPKWKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
G +++ + + + I + A
Sbjct: 233 AKLVARYSGPITLNVVDFTEIQLYIYDQCPHDELTIIMRRY------------MMKIAEE 280
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA R ++ G + TI+++ + + V P++ K E
Sbjct: 281 LANRSDCQGLITGESIGQVAS------QTIKSMYCTNEVCT---MPVFRPVIGFDKQEIV 331
Query: 182 KLAQDIGGQDLVNLILEES 200
L++ IG + E+
Sbjct: 332 DLSEKIGTYETSIQPFEDC 350
>gi|167751458|ref|ZP_02423585.1| hypothetical protein EUBSIR_02454 [Eubacterium siraeum DSM 15702]
gi|167655704|gb|EDR99833.1| hypothetical protein EUBSIR_02454 [Eubacterium siraeum DSM 15702]
Length = 358
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
A++ SGG DSS R ++
Sbjct: 1 MNNKAVIAMSGGVDSSVAAYLMKQRGFDCIGVT 33
>gi|167035317|ref|YP_001670548.1| argininosuccinate synthase [Pseudomonas putida GB-1]
gi|189046399|sp|B0KUE7|ASSY_PSEPG RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|166861805|gb|ABZ00213.1| Argininosuccinate synthase [Pseudomonas putida GB-1]
Length = 405
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|159044055|ref|YP_001532849.1| tRNA-specific 2-thiouridylase MnmA [Dinoroseobacter shibae DFL
12]
gi|205816871|sp|A8LK49|MNMA_DINSH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|157911815|gb|ABV93248.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dinoroseobacter shibae DFL 12]
Length = 384
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + V ++ Y + + C + I +
Sbjct: 22 SETRVVVAMSGGVDSSVVAAELACEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARR 81
Query: 66 KWKDSLGEDHILP 78
++ ++L
Sbjct: 82 VAEEMGFPHYVLD 94
>gi|133901714|ref|NP_001076631.1| hypothetical protein M106.4 [Caenorhabditis elegans]
gi|112982608|emb|CAL36508.1| C. elegans protein M106.4c, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 709
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG-QRNKVELECRLCVR 57
L++ SGG DS+ C + RV + D G R++ +
Sbjct: 237 KKVLVMVSGGVDSAVCAALLRRALGPNRVTAIHIDNGFMRHEESDAVEKSLA 288
>gi|71992717|ref|NP_001022257.1| hypothetical protein M106.4 [Caenorhabditis elegans]
gi|37620046|emb|CAE48508.1| C. elegans protein M106.4b, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 794
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG-QRNKVELECRLCVR 57
L++ SGG DS+ C + RV + D G R++ +
Sbjct: 322 KKVLVMVSGGVDSAVCAALLRRALGPNRVTAIHIDNGFMRHEESDAVEKSLA 373
>gi|71992710|ref|NP_001022256.1| hypothetical protein M106.4 [Caenorhabditis elegans]
gi|6016175|sp|Q09580|GUAA_CAEEL RecName: Full=Probable GMP synthase [glutamine-hydrolyzing];
AltName: Full=Glutamine amidotransferase
gi|3878715|emb|CAA87052.1| C. elegans protein M106.4a, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 792
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG-QRNKVELECRLCVR 57
L++ SGG DS+ C + RV + D G R++ +
Sbjct: 320 KKVLVMVSGGVDSAVCAALLRRALGPNRVTAIHIDNGFMRHEESDAVEKSLA 371
>gi|326803425|ref|YP_004321243.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Aerococcus urinae ACS-120-V-Col10a]
gi|326651703|gb|AEA01886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Aerococcus urinae ACS-120-V-Col10a]
Length = 374
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MND KK +L SGG DSS ++ V +
Sbjct: 1 MND--KKNKKVVLGMSGGVDSSVSALLLKEQGYDVIGI 36
>gi|326386236|ref|ZP_08207860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Novosphingobium nitrogenifigens DSM 19370]
gi|326209461|gb|EGD60254.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Novosphingobium nitrogenifigens DSM 19370]
Length = 401
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 22/136 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKW 67
++ SGG DSS + A V ++ Y + C + I +
Sbjct: 39 CRIVVAMSGGVDSSVVAALAARSGAEVIGVTLQLYDHGAATGRKGACCAGEDIRDARAVA 98
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP-GR-NI------IFLVF 118
++ S + V + D+ L T +P R N+ +
Sbjct: 99 DRLGFAHYVFDH-------ESDFREAVVERFADDYLSGRTPIPCIRCNMGPKFTDLM--- 148
Query: 119 AATLAYRLGITNIVIG 134
+A LG + G
Sbjct: 149 --AMARDLGADCLATG 162
>gi|325275197|ref|ZP_08141164.1| argininosuccinate synthase [Pseudomonas sp. TJI-51]
gi|324099684|gb|EGB97563.1| argininosuccinate synthase [Pseudomonas sp. TJI-51]
Length = 405
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|300865980|ref|ZP_07110716.1| Asparagine synthase family [Oscillatoria sp. PCC 6506]
gi|300336046|emb|CBN55874.1| Asparagine synthase family [Oscillatoria sp. PCC 6506]
Length = 557
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 32/103 (31%), Gaps = 16/103 (15%)
Query: 14 LFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
SGG DSS + A DR V T S +G E+E V
Sbjct: 229 YLSGGIDSSCVTAIAARLHDRPVHTFSIHFGAEYPSEIEFANIVAAHCG----------T 278
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
E HIL ++ T L VP N++
Sbjct: 279 EHHILEVSPQHIWQLLPETLEAMDDPVGEGL---TVP--NLLL 316
>gi|319790339|ref|YP_004151972.1| argininosuccinate synthase [Thermovibrio ammonificans HB-1]
gi|317114841|gb|ADU97331.1| argininosuccinate synthase [Thermovibrio ammonificans HB-1]
Length = 402
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
+L +SGG D+S + W DR V T + D GQ ++ E+ + + ++
Sbjct: 1 MGKRVVLAYSGGLDTSVIVRWLADRGFEVITYTADVGQGEELDEIPDKAKASGAVEAIVD 60
Query: 66 KWKDSLGEDHILPLAILGDI 85
K+ D+ +PL G +
Sbjct: 61 DIKEEFARDYCMPLMRAGAL 80
>gi|312881247|ref|ZP_07741045.1| tRNA-specific 2-thiouridylase MnmA [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309371139|gb|EFP98593.1| tRNA-specific 2-thiouridylase MnmA [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 369
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKK 59
M++ KK ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSENSKK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEDYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|296273321|ref|YP_003655952.1| PP-loop domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296097495|gb|ADG93445.1| PP-loop domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 250
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 42/149 (28%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-------TLSFDYGQRNKVELECRLCV 56
+IK+ L+ FSGG+DS+T L AL+ +V ++ YG +VE + C
Sbjct: 21 LIKEGDRVLVGFSGGKDSTT-LIHALNHIKKVTPFDFEFKAVTVTYGMGEQVEFLSKHCA 79
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGR 111
+ I E I+ I ++S + KN + +++ L +T
Sbjct: 80 KHGI------------EHEIIDTEIF-ELSKEKIRKNSSFCSFFSRMRRGYLYST----- 121
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDY 140
A G + +G D
Sbjct: 122 -----------AQEQGYNKLALGHHLDDA 139
>gi|168181589|ref|ZP_02616253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum Bf]
gi|237796359|ref|YP_002863911.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum Ba4
str. 657]
gi|182675018|gb|EDT86979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum Bf]
gi|229264171|gb|ACQ55204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum Ba4 str. 657]
Length = 353
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K AL SGG DSS +R V + D R++ E C + +
Sbjct: 1 MSKGTVALA-MSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVA 58
Query: 65 PKWKDSLGEDHILPLA 80
K H++ +
Sbjct: 59 EKLDIPF---HVINIG 71
>gi|153939777|ref|YP_001392187.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum F str. Langeland]
gi|205810589|sp|A7GHC7|MNMA2_CLOBL RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|152935673|gb|ABS41171.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum F str. Langeland]
gi|295320186|gb|ADG00564.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum F str. 230613]
Length = 353
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K AL SGG DSS +R V + D R++ E C + +
Sbjct: 1 MSKGTVALA-MSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVA 58
Query: 65 PKWKDSLGEDHILPL 79
K H++ +
Sbjct: 59 EKLDIPF---HVINI 70
>gi|52548840|gb|AAU82689.1| argininosuccinate synthase [uncultured archaeon GZfos19A5]
Length = 388
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP- 65
+L +SGG D+S C+ + +D V ++ + GQ + E + K
Sbjct: 2 KKVVLAYSGGLDTSVCIPLLKEHYGYDEVIAVTVNVGQPEEDIKEAKERGAKLSNSYREI 61
Query: 66 KWKDSLGEDHILPL 79
KD D+I PL
Sbjct: 62 DAKDEFVRDYIFPL 75
>gi|328473137|gb|EGF43985.1| tRNA-specific 2-thiouridylase MnmA [Vibrio parahaemolyticus
10329]
Length = 374
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|323497848|ref|ZP_08102859.1| tRNA-specific 2-thiouridylase MnmA [Vibrio sinaloensis DSM 21326]
gi|323317076|gb|EGA70076.1| tRNA-specific 2-thiouridylase MnmA [Vibrio sinaloensis DSM 21326]
Length = 369
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|307946670|ref|ZP_07662005.1| NAD(+) synthase (glutamine-hydrolyzing) [Roseibium sp. TrichSKD4]
gi|307770334|gb|EFO29560.1| NAD(+) synthase (glutamine-hydrolyzing) [Roseibium sp. TrichSKD4]
Length = 555
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 12 LLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMP 65
++L SGG DS+ C + A+D D+V + Y R E + C +
Sbjct: 290 VVLGLSGGIDSAICAAMAVDALGADKVHAIMLPY--RYTSEESIKDAAECAAALGIRYDT 347
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN 93
+ L+ L + S T+
Sbjct: 348 VPIEEPVLGFTNVLSDLFAGTKSDTTEE 375
>gi|269960819|ref|ZP_06175190.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio harveyi 1DA3]
gi|269834483|gb|EEZ88571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio harveyi 1DA3]
Length = 380
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|163801953|ref|ZP_02195849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. AND4]
gi|159174094|gb|EDP58902.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. AND4]
Length = 374
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|153835174|ref|ZP_01987841.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio harveyi HY01]
gi|148868331|gb|EDL67456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio harveyi HY01]
Length = 374
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|149191014|ref|ZP_01869275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio shilonii AK1]
gi|148835148|gb|EDL52124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio shilonii AK1]
Length = 369
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|114706635|ref|ZP_01439536.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fulvimarina pelagi HTCC2506]
gi|114538027|gb|EAU41150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fulvimarina pelagi HTCC2506]
Length = 394
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS + D V ++ + C + + + D
Sbjct: 18 RVIVAMSGGVDSSVTAAILKDEGYDVVGITLQLYDAGDTPAKAGACCAGQDIRDARRVCD 77
Query: 70 SLGEDH-ILP 78
LG H +L
Sbjct: 78 LLGIPHYVLD 87
>gi|91226036|ref|ZP_01260963.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio alginolyticus 12G01]
gi|91189477|gb|EAS75754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio alginolyticus 12G01]
Length = 374
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|153838264|ref|ZP_01990931.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus AQ3810]
gi|161511058|ref|NP_797509.2| tRNA-specific 2-thiouridylase MnmA [Vibrio parahaemolyticus RIMD
2210633]
gi|260364461|ref|ZP_05777086.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus K5030]
gi|260877061|ref|ZP_05889416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus AN-5034]
gi|260896850|ref|ZP_05905346.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus Peru-466]
gi|260902426|ref|ZP_05910821.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus AQ4037]
gi|32130287|sp|Q87QL9|MNMA_VIBPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|149748319|gb|EDM59178.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus AQ3810]
gi|308087006|gb|EFO36701.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus Peru-466]
gi|308093683|gb|EFO43378.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus AN-5034]
gi|308110639|gb|EFO48179.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus AQ4037]
gi|308114601|gb|EFO52141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus K5030]
Length = 374
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|26987824|ref|NP_743249.1| argininosuccinate synthase [Pseudomonas putida KT2440]
gi|104780418|ref|YP_606916.1| argininosuccinate synthase [Pseudomonas entomophila L48]
gi|148546372|ref|YP_001266474.1| argininosuccinate synthase [Pseudomonas putida F1]
gi|30172776|sp|P59604|ASSY_PSEPK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|166221008|sp|Q1IE03|ASSY_PSEE4 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|166221010|sp|A5VZI0|ASSY_PSEP1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|24982523|gb|AAN66713.1|AE016299_9 argininosuccinate synthase [Pseudomonas putida KT2440]
gi|95109405|emb|CAK14105.1| putative argininosuccinate synthase [Pseudomonas entomophila L48]
gi|148510430|gb|ABQ77290.1| argininosuccinate synthase [Pseudomonas putida F1]
gi|313497454|gb|ADR58820.1| ArgG [Pseudomonas putida BIRD-1]
Length = 405
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|288942041|ref|YP_003444281.1| argininosuccinate synthase [Allochromatium vinosum DSM 180]
gi|288897413|gb|ADC63249.1| argininosuccinate synthase [Allochromatium vinosum DSM 180]
Length = 406
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 22/132 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPK 66
+L +SGG D+S L W +++ V T + D GQ ++E + E+ +
Sbjct: 7 KKVVLAYSGGLDTSVILKWLQEQYGCEVVTFTADIGQGEELEPARTKAQAAGVKEIYIDD 66
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---FLVFAATLA 123
++ D + P+ I ++ R +I + AA
Sbjct: 67 LREEFVSDFVFPMFRANTIYEGEYLLGTSI-------------ARPLIAKRLIEIAA--- 110
Query: 124 YRLGITNIVIGV 135
G I G
Sbjct: 111 -ETGADAIAHGA 121
>gi|237736430|ref|ZP_04566911.1| argininosuccinate synthase [Fusobacterium mortiferum ATCC 9817]
gi|229421472|gb|EEO36519.1| argininosuccinate synthase [Fusobacterium mortiferum ATCC 9817]
Length = 399
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNK-VELECRLCVRKKIVEL 63
+L +SGG D+S + W + ++ V +S D GQ++ +E+E R
Sbjct: 1 MKEKVVLAYSGGLDTSVIVPWLKENYNDVEVIAVSVDVGQKDDFMEVEKRALAIGASKFY 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ KD L D I P+ G + ++
Sbjct: 61 VVDKKDELVNDFIFPMLKSGAKYENEYLLGTSIA 94
>gi|194899097|ref|XP_001979099.1| GG10357 [Drosophila erecta]
gi|190650802|gb|EDV48057.1| GG10357 [Drosophila erecta]
Length = 419
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELM 64
+ +L +SGG D+S L W LD+ V + D GQ+ E + KK++ +
Sbjct: 3 RETVILAYSGGLDTSCILKWLLDKHFEVVCVLADVGQKEDFTAAEKKALKIGAKKVI--L 60
Query: 65 PKWKDSLGEDHILPLAILGDI 85
K S ED+I P +G +
Sbjct: 61 ADVKQSFVEDYIWPAVQMGLV 81
>gi|170755772|ref|YP_001782543.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum B1 str. Okra]
gi|205810298|sp|B1ILH4|MNMA1_CLOBK RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|169120984|gb|ACA44820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum B1 str. Okra]
Length = 353
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K AL SGG DSS +R V + D R++ E C + +
Sbjct: 1 MSKGTVALA-MSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVA 58
Query: 65 PKWKDSLGEDHILPL 79
K H++ +
Sbjct: 59 EKLDIPF---HVINI 70
>gi|148555877|ref|YP_001263459.1| argininosuccinate synthase [Sphingomonas wittichii RW1]
gi|172048260|sp|A5VAK5|ASSY_SPHWW RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|148501067|gb|ABQ69321.1| argininosuccinate synthase [Sphingomonas wittichii RW1]
Length = 405
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+ +L FSGG D+S L W + V T + D GQ ELE K +
Sbjct: 1 MSDVKRVVLAFSGGLDTSVILKWLQQTYQCEVVTFTADLGQ--GEELEPARAKAKLMGVP 58
Query: 63 ----LMPKWKDSLGEDHILPL 79
+ ++ +D++ P+
Sbjct: 59 DEHIFIDDLREEFVKDYVFPM 79
>gi|91216303|ref|ZP_01253270.1| argininosuccinate synthase [Psychroflexus torquis ATCC 700755]
gi|91185441|gb|EAS71817.1| argininosuccinate synthase [Psychroflexus torquis ATCC 700755]
Length = 394
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ +SGG D+S C V +S + G E++ K+
Sbjct: 2 KKLVIAYSGGLDTSYCAVSLSKAGYEVHAVSVNTGGFTSEEIKKIEAKALKM 53
>gi|86132339|ref|ZP_01050934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dokdonia donghaensis MED134]
gi|85817258|gb|EAQ38441.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dokdonia donghaensis MED134]
Length = 397
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS ++ V L
Sbjct: 2 KTVVVGLSGGVDSSVTAYLLKEQGYNVIGL 31
>gi|325262735|ref|ZP_08129471.1| PP-loop family protein [Clostridium sp. D5]
gi|324031829|gb|EGB93108.1| PP-loop family protein [Clostridium sp. D5]
Length = 285
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 42/182 (23%)
Query: 13 LLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ FSGG DSS L A + V ++ +L V K+
Sbjct: 33 VAFSGGADSSLLLKLACECAKKQGKNVYAMTIQTELHTLEDLNIAEKVAKETGSFHEVLY 92
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
E+ + + + ++ + A + GI
Sbjct: 93 VDELEEAGIEMNPVNRCYLCKKLLFTKIREK-----------------------ALQRGI 129
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLKKYETWKLAQD 186
+ I+ G D + Y R I+AI + + +PL + K E +LA +
Sbjct: 130 SRILEGTNADDLTMY---RPG-IQAI---------RELRIGSPLAEAEMTKAEVRRLAAE 176
Query: 187 IG 188
G
Sbjct: 177 FG 178
>gi|269468097|gb|EEZ79807.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[uncultured SUP05 cluster bacterium]
Length = 367
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS L++ VE L
Sbjct: 3 SSTPNKNNKIIVGLSGGVDSSVAALLLLEQGYDVEAL 39
>gi|212704763|ref|ZP_03312891.1| hypothetical protein DESPIG_02827 [Desulfovibrio piger ATCC
29098]
gi|212671826|gb|EEB32309.1| hypothetical protein DESPIG_02827 [Desulfovibrio piger ATCC
29098]
Length = 382
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
M + ++ ++LFSGG DS ++ RV L
Sbjct: 16 MVNADQRPVDVVVLFSGGLDSILAAKVMEEQGLRVCCLH 54
>gi|187925180|ref|YP_001896822.1| argininosuccinate synthase [Burkholderia phytofirmans PsJN]
gi|229889864|sp|B2SY63|ASSY_BURPP RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|187716374|gb|ACD17598.1| Argininosuccinate synthase [Burkholderia phytofirmans PsJN]
Length = 408
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D +D V T + D GQ ++E R + ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-PARKKALQLGIKQ 59
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 60 DNIFIEDLREEFVRD 74
>gi|147919832|ref|YP_686419.1| hypothetical protein RCIX1925 [uncultured methanogenic archaeon
RC-I]
gi|110621815|emb|CAJ37093.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length = 377
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
KK ++ SGG+DS+ L A+ R + FD G + + + ++ +
Sbjct: 64 KKEYDCVVGVSGGRDSTYVLYNAIKLGLRPLAVHFDNGWNSDIAVSNIKRATTRLNVDLH 123
Query: 66 KWKDSLGEDHILPLAILGD 84
E L + L
Sbjct: 124 TVVADWEEFKDLQKSFLKA 142
>gi|308513324|ref|NP_953615.2| tRNA-specific 2-thiouridylase MnmA [Geobacter sulfurreducens PCA]
gi|81701559|sp|Q74A22|MNMA_GEOSL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|41152729|gb|AAR35942.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sulfurreducens PCA]
gi|298506604|gb|ADI85327.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase
[Geobacter sulfurreducens KN400]
Length = 365
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY 42
K ++ SGG DSS + + V +S DY
Sbjct: 4 KHRQRIVIAMSGGVDSSVAAALLKEEGHEVIGISMQVWDY 43
>gi|326804523|ref|YP_004327394.1| putative uncharacterised protein [Salmonella phage Vi01]
gi|301795173|emb|CBW37891.1| putative uncharacterised protein [Salmonella phage Vi01]
Length = 220
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 54/183 (29%), Gaps = 46/183 (25%)
Query: 12 LLLF-SGGQDSSTCLSWALDRFDRVETLSFDYGQ------RNKVELECRLCVRKKIVELM 64
+ LF SGG DS+ L W L + V T+ Y ++K E R + I +
Sbjct: 30 VTLFWSGGVDSTYMLVWLLSKGYSVHTV---YCHLENNNFKSKRENWARNKIYNWINKNA 86
Query: 65 PKWKDSLGEDH------ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
P +P + + + + +LP T++
Sbjct: 87 PLLMHRWTHHQEPISSIHVPDGGFRACLAQAPIWLLNTQFKGRSLPPTYI---------- 136
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDT---IRAIETAINLGMESHVTVHTPLMWL 175
LAY G I I G E + + PL+ L
Sbjct: 137 ---LAYVNGDDAIHW-------------IPAFNKVIEGYNMMTRDG-ERPIEILYPLISL 179
Query: 176 KKY 178
KK
Sbjct: 180 KKS 182
>gi|300871373|ref|YP_003786246.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
gi|300689074|gb|ADK31745.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
Length = 346
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+KKA A+LL SGG DS + V + F
Sbjct: 1 MKKA-KAILLLSGGLDSMLVGAILKRENIDVLAVRF 35
>gi|259046841|ref|ZP_05737242.1| thiamine biosynthesis protein ThiI [Granulicatella adiacens ATCC
49175]
gi|259036464|gb|EEW37719.1| thiamine biosynthesis protein ThiI [Granulicatella adiacens ATCC
49175]
Length = 385
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 60/205 (29%), Gaps = 53/205 (25%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS A+ R ++ + F P
Sbjct: 158 RVMLMLSGGIDSPVAGYLAMKRGMEIQCVHF---------------------ASPPYTSP 196
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-------GRNIIFLVF---- 118
E L A + S V + + VP R L
Sbjct: 197 QALEKTKLLAAKIARFGGSIQFLTVPFSRIQEEIKKS-VPEAYLMTIMR-RFMLRITDQL 254
Query: 119 ---AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
A LA G + +G + + +++ + + ++ + P+ +
Sbjct: 255 RENARALAIANGES---VGQVAS-------------QTLDSMVAINDVTNTPIIRPVATM 298
Query: 176 KKYETWKLAQDIGGQDLVNLILEES 200
K + K+A++I +L E+
Sbjct: 299 DKLDIIKVAEEIDTFELSIQPFEDC 323
>gi|94498089|ref|ZP_01304652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingomonas sp. SKA58]
gi|94422524|gb|EAT07562.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingomonas sp. SKA58]
Length = 368
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 36/130 (27%), Gaps = 4/130 (3%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
+ ++ SGG DSS + A V ++ Y V C + I +
Sbjct: 11 RDQRRIVVAMSGGVDSSVVAALAAKTGAEVIGVTLQLYDHGAAVGRTGSCCAGQDIRDAR 70
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
++ S+ + A + P V + +A
Sbjct: 71 AVADRIGIAHYVFD---YESRFRDSVIADFADEYMAGRTPIPCVKCNMGVKFTDLFQIAR 127
Query: 125 RLGITNIVIG 134
LG + G
Sbjct: 128 DLGADCLATG 137
>gi|89255998|ref|YP_513360.1| asparagine synthase [Francisella tularensis subsp. holarctica LVS]
gi|115314478|ref|YP_763201.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
subsp. holarctica OSU18]
gi|156502001|ref|YP_001428066.1| asparagine synthase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254367347|ref|ZP_04983373.1| asparagine synthase [Francisella tularensis subsp. holarctica 257]
gi|254368830|ref|ZP_04984843.1| asparagine synthase [Francisella tularensis subsp. holarctica
FSC022]
gi|290953232|ref|ZP_06557853.1| asparagine synthase [Francisella tularensis subsp. holarctica
URFT1]
gi|295313545|ref|ZP_06804135.1| asparagine synthase [Francisella tularensis subsp. holarctica
URFT1]
gi|89143829|emb|CAJ79040.1| asparagine synthase [Francisella tularensis subsp. holarctica LVS]
gi|115129377|gb|ABI82564.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
subsp. holarctica OSU18]
gi|134253163|gb|EBA52257.1| asparagine synthase [Francisella tularensis subsp. holarctica 257]
gi|156252604|gb|ABU61110.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|157121751|gb|EDO65921.1| asparagine synthase [Francisella tularensis subsp. holarctica
FSC022]
Length = 628
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 15 FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+T ++ D++ T S + Q+ E E V K I
Sbjct: 271 LSGGIDSTTVIALMQSMSKDKINTFSIGFNQKEYNEAEHARAVAKHI 317
>gi|332187411|ref|ZP_08389149.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingomonas sp. S17]
gi|332012572|gb|EGI54639.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingomonas sp. S17]
Length = 365
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+A ++ SGG DSS + A ++ Y V C + I +
Sbjct: 11 RAKRIVVAMSGGVDSSVVAALAHATGAETIGVTLQLYDHGEAVGRAGACCAGRDIRDARA 70
Query: 66 KWKDSLGEDHILP 78
++
Sbjct: 71 VCDRLGIAHYVFD 83
>gi|269967776|ref|ZP_06181823.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio alginolyticus 40B]
gi|269827596|gb|EEZ81883.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio alginolyticus 40B]
Length = 430
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 57 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 110
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 111 DLADAQAVCDKLGIHLHTINFA 132
>gi|262394626|ref|YP_003286480.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. Ex25]
gi|262338220|gb|ACY52015.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. Ex25]
Length = 374
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|170693516|ref|ZP_02884675.1| Argininosuccinate synthase [Burkholderia graminis C4D1M]
gi|170141671|gb|EDT09840.1| Argininosuccinate synthase [Burkholderia graminis C4D1M]
Length = 408
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D +D V T + D GQ ++E R + ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-PARKKALQLGIKQ 59
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 60 DNIFIEDLREEFVRD 74
>gi|160903135|ref|YP_001568716.1| carbamoyl-phosphate synthase, large subunit [Petrotoga mobilis SJ95]
gi|160360779|gb|ABX32393.1| carbamoyl-phosphate synthase, large subunit [Petrotoga mobilis SJ95]
Length = 1496
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ---RNKVELECRLCVRKKI 60
+K +L +SGG D+S + W +++ + + D GQ + +E + K+
Sbjct: 1081 MKTGEKVVLAYSGGLDTSVIIPWLKEKYNCEIIAVCIDVGQGEETHVIEKKALSSGASKV 1140
Query: 61 VELMPKWKDSLGEDHILPLAILGDI 85
+ + D+I P G I
Sbjct: 1141 --YVEDVVEEFVTDYIFPTLKAGAI 1163
>gi|89895170|ref|YP_518657.1| hypothetical protein DSY2424 [Desulfitobacterium hafniense Y51]
gi|122482441|sp|Q24US9|MNMA_DESHY RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|89334618|dbj|BAE84213.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 370
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + ++ SGG DSS + + V ++
Sbjct: 2 TLTEKKKVVVGMSGGVDSSMAAALLKEEGYEVIGIT 37
>gi|219669597|ref|YP_002460032.1| tRNA-specific 2-thiouridylase MnmA [Desulfitobacterium hafniense
DCB-2]
gi|219539857|gb|ACL21596.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfitobacterium hafniense DCB-2]
Length = 370
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + ++ SGG DSS + + V ++
Sbjct: 2 TLTEKKKVVVGMSGGVDSSMAAALLKEEGYEVIGIT 37
>gi|328955218|ref|YP_004372551.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coriobacterium glomerans PW2]
gi|328455542|gb|AEB06736.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coriobacterium glomerans PW2]
Length = 380
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 11/135 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVEL 63
+ + S L+ SGG DSS L+R + Y + +C V
Sbjct: 1 MTRKQSVLVAMSGGVDSSVAAHLLLERGYTCIGATMSLYDETTMGRDPEGICGCADDVAD 60
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFA 119
LG +H + D+ + + PN P R + F
Sbjct: 61 ARAVCARLGIEHRVF--DFKDLFERRVIDRFVEQYLSGRTPN---PCADCNRALKFGAL- 114
Query: 120 ATLAYRLGITNIVIG 134
A +G I G
Sbjct: 115 LDRALEIGCDFIATG 129
>gi|322807224|emb|CBZ04798.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum H04402 065]
Length = 353
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K AL SGG DSS +R V + D R++ E C + +
Sbjct: 1 MSKGTVALA-MSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVA 58
Query: 65 PKWKDSLGEDHILPL 79
K H++ +
Sbjct: 59 EKLDIPF---HVINI 70
>gi|291535108|emb|CBL08220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Roseburia intestinalis M50/1]
Length = 359
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
A ++ SGG DSS ++ V ++
Sbjct: 3 AKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVT 34
>gi|168179339|ref|ZP_02614003.1| tRNA -methyltransferase [Clostridium botulinum NCTC 2916]
gi|226950335|ref|YP_002805426.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A2 str.
Kyoto]
gi|182669769|gb|EDT81745.1| tRNA -methyltransferase [Clostridium botulinum NCTC 2916]
gi|226844215|gb|ACO86881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A2 str. Kyoto]
Length = 353
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K AL SGG DSS +R V + D R++ E C + +
Sbjct: 1 MSKGTVALA-MSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVA 58
Query: 65 PKWKDSLGEDHILPL 79
K H++ +
Sbjct: 59 EKLDIPF---HVINI 70
>gi|94987098|ref|YP_595031.1| argininosuccinate synthase [Lawsonia intracellularis PHE/MN1-00]
gi|119361284|sp|Q1MQL7|ASSY_LAWIP RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|94731347|emb|CAJ54710.1| Argininosuccinate synthase [Lawsonia intracellularis PHE/MN1-00]
Length = 397
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQR---NKVELEC 52
+ + +L +SGG D+S L W + + V ++ D GQ + +E +
Sbjct: 1 MSNRIKKVVLAYSGGLDTSVILKWLIATYNCEVIAVTADLGQNENFHDIEEKA 53
>gi|251772733|gb|EES53295.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptospirillum ferrodiazotrophum]
Length = 372
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+K+ S ++ SGG DS+ V +
Sbjct: 1 MKRNKSIVIGMSGGVDSAVSAWLLKKEGYDVTGV 34
>gi|237719106|ref|ZP_04549587.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229451485|gb|EEO57276.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 361
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MEERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAERMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHI 76
+ + +K+++ ++ I
Sbjct: 59 YVADERIPFKETIVKNFI 76
>gi|319403509|emb|CBI77088.1| Argininosuccinate synthase [Bartonella rochalimae ATCC BAA-1498]
Length = 407
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL- 63
K+ +L +SGG D+S L W V T + D GQ ++EL R + E+
Sbjct: 5 KEIKKVVLAYSGGLDTSIILKWLQSELGAEVVTFTADLGQGEELELARRKAEMLGVKEIY 64
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ + + ++
Sbjct: 65 IEDLREEFVRDFVFPMFRANAVYEGAYLLGTSIA 98
>gi|313201356|ref|YP_004040014.1| argininosuccinate synthase [Methylovorus sp. MP688]
gi|312440672|gb|ADQ84778.1| argininosuccinate synthase [Methylovorus sp. MP688]
Length = 407
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ ELE KK +
Sbjct: 1 MSDVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQ--GEELEPAREKAKKFG-V 57
Query: 64 MPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 58 KEIYIDDLREEFVRD 72
>gi|291535167|emb|CBL08279.1| thiazole biosynthesis/tRNA modification protein ThiI [Roseburia
intestinalis M50/1]
Length = 393
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 60/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R ++ F + +K +
Sbjct: 175 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVTIDATYF-----HAPPYTSERAKQKVVDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ K+ + + I I + + + ++ + A
Sbjct: 230 KIVAKYSGPINLHVVNFTDIQLYIYEQCPHEELTIIMRRY-------------MMKLAEH 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A ++ G + + +++ + V+ PL+ K E
Sbjct: 277 FAKENKCLGLITGESIGQVAS---------QTMQSLAATNEVCTMPVYRPLIGFDKQEIV 327
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ I + L E+
Sbjct: 328 EISEKIDAYETSILPFEDC 346
>gi|255536681|ref|YP_003097052.1| tRNA-specific 2-thiouridylase MnmA [Flavobacteriaceae bacterium
3519-10]
gi|255342877|gb|ACU08990.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Flavobacteriaceae bacterium 3519-10]
Length = 395
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 11/129 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS + V L V LE + + + +
Sbjct: 2 KIVVGLSGGVDSSVAAYLLQKQGHEVVALFMRNWNDASVTLEDECPWIEDSNDALMVAQK 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNI---IFLVFAATLAYR 125
++ ++ ++ + + + + PN V R + +F+ A +
Sbjct: 62 LGIPFQVIDMS---ELYKEKIVDYMFAEYEKGRTPNPDVLCNREVKFDVFMKTALS---- 114
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 115 LGAEKVATG 123
>gi|315920804|ref|ZP_07917044.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694679|gb|EFS31514.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 384
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
+++ LL SGG DSS L+ V ++F Y E LE + +++
Sbjct: 1 MEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERL 58
>gi|262037400|ref|ZP_06010864.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptotrichia goodfellowii F0264]
gi|261748562|gb|EEY35937.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptotrichia goodfellowii F0264]
Length = 364
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
K ++ SGG DSS + V ++
Sbjct: 5 KDNKKVIVGMSGGIDSSVAALLLKNEGYEVIGVT 38
>gi|257470341|ref|ZP_05634432.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium ulcerans ATCC 49185]
gi|317064551|ref|ZP_07929036.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium ulcerans ATCC 49185]
gi|313690227|gb|EFS27062.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium ulcerans ATCC 49185]
Length = 359
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
D K+ + + SGG DSST + V ++
Sbjct: 15 DENNKSTTIAVAMSGGVDSSTVAYLLKKQGYNVFGVT 51
>gi|158522149|ref|YP_001530019.1| hypothetical protein Dole_2138 [Desulfococcus oleovorans Hxd3]
gi|158510975|gb|ABW67942.1| hypothetical protein Dole_2138 [Desulfococcus oleovorans Hxd3]
Length = 207
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 61/233 (26%), Gaps = 46/233 (19%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + L ++SGG DS L L L + +E R K ++
Sbjct: 1 MVQEKKILCMYSGGLDSLGVLYRLLTEPEYADFGLHV--HHMHLKNVENRALAESKAIQA 58
Query: 64 MPKWKDSLGEDHIL------PLAILGDISHSSL----TKNVAMKIQDNNLPNTFVPGRNI 113
++ G + L + + + D+++ + V GR
Sbjct: 59 TFRYFREKGYRNFLYTESGHDYSFMRRYFTFDTYWYAFMAANIITADSSIMHVAV-GRTK 117
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
+ A + I + L + + P+
Sbjct: 118 SDMESAGSRMNANRGHEI----------------------FHATLPLELRFDRSYIYPVA 155
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
L K W + L + E S +C + C CP C
Sbjct: 156 HLTKQAVWNM--------LPADLRELSWSCRKPVISDKEP--RPCGKCPTCQE 198
>gi|258646059|ref|ZP_05733528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dialister invisus DSM 15470]
gi|260403430|gb|EEW96977.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dialister invisus DSM 15470]
Length = 350
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQ--RNKVELECRLCVRKK 59
+ + ++ SGG DS+ + V + FD GQ ++ L + K
Sbjct: 1 MTEKKKVVVAMSGGVDSTLTARLLQEAGYDVYGATMNQFD-GQDMTEAQKIADFLGIPHK 59
Query: 60 IVELMPKWKDSL 71
++++ ++D +
Sbjct: 60 VIDVRKMYQDIV 71
>gi|254416844|ref|ZP_05030593.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Microcoleus chthonoplastes PCC 7420]
gi|196176390|gb|EDX71405.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Microcoleus chthonoplastes PCC 7420]
Length = 359
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 28/136 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS + + V L+ GQ C + +V+
Sbjct: 7 KKVVVGLSGGVDSSVAAATLHHQGYEVVGLTLWLMKGKGQ----------CCSEGMVDAA 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN------VAMKIQDNNLPNTFVPGRNIIFLVF 118
+ HI+ + + + + N F P L +
Sbjct: 57 FICEQLGIPHHIVDSREVFQANIVDYLVSGYESGITPLPCSQCNKTVKFGP-----MLAY 111
Query: 119 AATLAYRLGITNIVIG 134
A LGI I G
Sbjct: 112 AR---ETLGIDKIATG 124
>gi|168988983|pdb|2NZ2|A Chain A, Crystal Structure Of Human Argininosuccinate Synthase In
Complex With Aspartate And Citrulline
Length = 404
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 9 PSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+++L +SGG D+S L W ++ V + GQ+ E
Sbjct: 1 KGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 45
>gi|159185866|ref|NP_356917.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Agrobacterium tumefaciens str. C58]
gi|25298384|pir||AC3012 hypothetical protein trmU [imported] - Agrobacterium tumefaciens
(strain C58, Dupont)
gi|159141000|gb|AAK89702.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Agrobacterium tumefaciens str. C58]
Length = 380
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 53/192 (27%), Gaps = 28/192 (14%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS V ++ Y V C + I + +
Sbjct: 1 MSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCETLGIP 60
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
++L ++ A P V + A LG +
Sbjct: 61 HYVLD---YEARFRETVINPFAEAYAMGETPIPCVACNQTVKFADLLATAQELGADALAT 117
Query: 134 GVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHT-----------PLMWLK 176
G Y R + + RA+ I+ + + PL L
Sbjct: 118 GH-------YIRSRPNPVSGQPGRRALYRPIDSDRDQSWFLFATTQEQIDYLRFPLGGLS 170
Query: 177 KYETWKLAQDIG 188
K ET LA+++G
Sbjct: 171 KAETRALAEEMG 182
>gi|254457847|ref|ZP_05071274.1| thiamine biosynthesis/tRNA modification protein ThiI
[Campylobacterales bacterium GD 1]
gi|207085240|gb|EDZ62525.1| thiamine biosynthesis/tRNA modification protein ThiI
[Campylobacterales bacterium GD 1]
Length = 487
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 25/177 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L L SGG DS+ + + R + + F+ G E+ + + +
Sbjct: 189 LSLMSGGFDSTVASYFTMKRGIKTHFIFFNLGGMAH-EIGVKQVALYLWSKFGSSHRVKF 247
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ L +I S+ + + ++ + L+ + +A L I +
Sbjct: 248 ISVPFDDV--LTEIFRSTAPTYMGVTLKR-------------LMLMASEKVADSLEIDAL 292
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+ G S + + + S+ + PL + K E +A DIG
Sbjct: 293 LTGESVAQVSS---------QTLRNLAIIDQASNKLILRPLSTMNKPEIMAIADDIG 340
>gi|331091340|ref|ZP_08340180.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330404501|gb|EGG84045.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 394
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 61/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +E F + +K +
Sbjct: 176 PVGTNGKAMLLLSGGIDSPVAGYMISKRGVGLEATYF-----HAPPYTSERAKQKVIDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ K+ + + + I I + + ++ + A
Sbjct: 231 KLVSKYSGPIKLNIVNFTDIQLYIYDKCPHDELTIIMRRY-------------MMKIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A G ++ G + + +++ + + V+ P++ K E
Sbjct: 278 FAKESGCLGLITGESIGQVAS---------QTMQSLMATNDVCTLPVYRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+A+ I + L E+
Sbjct: 329 DIAEKIDTYETSILPFEDC 347
>gi|314938903|ref|ZP_07846170.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133a04]
gi|314943088|ref|ZP_07849889.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133C]
gi|314948114|ref|ZP_07851515.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0082]
gi|314951620|ref|ZP_07854665.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133A]
gi|314993875|ref|ZP_07859209.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133B]
gi|314996716|ref|ZP_07861739.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133a01]
gi|313589154|gb|EFR67999.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133a01]
gi|313591685|gb|EFR70530.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133B]
gi|313596216|gb|EFR75061.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133A]
gi|313598190|gb|EFR77035.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133C]
gi|313641777|gb|EFS06357.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0133a04]
gi|313645450|gb|EFS10030.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium TX0082]
Length = 397
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +A+ R +E + F +K +L K
Sbjct: 173 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKLAP 226
Query: 70 SLGEDHILPLAI 81
+G H + +
Sbjct: 227 YVGTIHFIEVPF 238
>gi|300710946|ref|YP_003736760.1| thiamine biosynthesis protein ThiI [Halalkalicoccus jeotgali B3]
gi|299124629|gb|ADJ14968.1| thiamine biosynthesis protein ThiI [Halalkalicoccus jeotgali B3]
Length = 388
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 48/181 (26%), Gaps = 32/181 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPKWK 68
+ L SGG DS + R V L FD YG + V
Sbjct: 185 VALLSGGIDSPVAAWELMKRGAPVIPLYFDFEAYGGVDHVARAVESARTLAGYAPNHTRD 244
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + I + + L LA G
Sbjct: 245 LRIAPAGAAAARFVEGIGPTRMLSLRR------------------FMLRVGERLARETGA 286
Query: 129 TNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
IV G S + A+ + + + VH PL+ K E A++I
Sbjct: 287 VGIVTGEAIGQKSSQ---------TSANLAVTDAV-AELPVHRPLLTRDKQEIIARAREI 336
Query: 188 G 188
G
Sbjct: 337 G 337
>gi|293557229|ref|ZP_06675777.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1039]
gi|291600593|gb|EFF30897.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1039]
Length = 403
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +A+ R +E + F +K +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKLAP 232
Query: 70 SLGEDHILPLAI 81
+G H + +
Sbjct: 233 YVGTIHFIEVPF 244
>gi|257899237|ref|ZP_05678890.1| thiamine biosynthesis protein [Enterococcus faecium Com15]
gi|257837149|gb|EEV62223.1| thiamine biosynthesis protein [Enterococcus faecium Com15]
Length = 403
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +A+ R +E + F +K +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKLAP 232
Query: 70 SLGEDHILPLAI 81
+G H + +
Sbjct: 233 YVGTIHFIEVPF 244
>gi|257888390|ref|ZP_05668043.1| thiamine biosynthesis protein [Enterococcus faecium 1,141,733]
gi|257897236|ref|ZP_05676889.1| thiamine biosynthesis protein [Enterococcus faecium Com12]
gi|293378008|ref|ZP_06624186.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium PC4.1]
gi|293570384|ref|ZP_06681441.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E980]
gi|257824444|gb|EEV51376.1| thiamine biosynthesis protein [Enterococcus faecium 1,141,733]
gi|257833801|gb|EEV60222.1| thiamine biosynthesis protein [Enterococcus faecium Com12]
gi|291609562|gb|EFF38827.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E980]
gi|292643373|gb|EFF61505.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium PC4.1]
Length = 403
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +A+ R +E + F +K +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKLAP 232
Query: 70 SLGEDHILPLAI 81
+G H + +
Sbjct: 233 YVGTIHFIEVPF 244
>gi|257885018|ref|ZP_05664671.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,501]
gi|257820870|gb|EEV48004.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,501]
Length = 403
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +A+ R +E + F +K +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKLAP 232
Query: 70 SLGEDHILPLAI 81
+G H + +
Sbjct: 233 YVGTIHFIEVPF 244
>gi|227550357|ref|ZP_03980406.1| thiamine biosynthesis protein [Enterococcus faecium TX1330]
gi|227180496|gb|EEI61468.1| thiamine biosynthesis protein [Enterococcus faecium TX1330]
Length = 397
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +A+ R +E + F +K +L K
Sbjct: 173 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKLAP 226
Query: 70 SLGEDHILPLAI 81
+G H + +
Sbjct: 227 YVGTIHFIEVPF 238
>gi|212223802|ref|YP_002307038.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
gi|212008759|gb|ACJ16141.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
Length = 264
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+LFSGG+DSS L + V L+F
Sbjct: 20 EKRILVLFSGGKDSSLALYLLNEAGLNVSALTF 52
>gi|69246249|ref|ZP_00603862.1| Thiamine biosynthesis protein [Enterococcus faecium DO]
gi|257879523|ref|ZP_05659176.1| thiamine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257883458|ref|ZP_05663111.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257890244|ref|ZP_05669897.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|257894821|ref|ZP_05674474.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,408]
gi|258616814|ref|ZP_05714584.1| thiazole biosynthesis protein ThiI [Enterococcus faecium DO]
gi|260559760|ref|ZP_05831940.1| thiamine biosynthesis protein [Enterococcus faecium C68]
gi|261209051|ref|ZP_05923455.1| thiamine biosynthesis protein [Enterococcus faecium TC 6]
gi|289566555|ref|ZP_06446977.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium D344SRF]
gi|293559743|ref|ZP_06676264.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1162]
gi|294615717|ref|ZP_06695570.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1636]
gi|294617311|ref|ZP_06696951.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1679]
gi|294622526|ref|ZP_06701544.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium U0317]
gi|68195350|gb|EAN09799.1| Thiamine biosynthesis protein [Enterococcus faecium DO]
gi|257813751|gb|EEV42509.1| thiamine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257819116|gb|EEV46444.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257826604|gb|EEV53230.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|257831200|gb|EEV57807.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,408]
gi|260074428|gb|EEW62750.1| thiamine biosynthesis protein [Enterococcus faecium C68]
gi|260076963|gb|EEW64686.1| thiamine biosynthesis protein [Enterococcus faecium TC 6]
gi|289161654|gb|EFD09532.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium D344SRF]
gi|291591437|gb|EFF23093.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1636]
gi|291596420|gb|EFF27673.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1679]
gi|291597969|gb|EFF29083.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium U0317]
gi|291606291|gb|EFF35704.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1162]
Length = 403
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +A+ R +E + F +K +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKLAP 232
Query: 70 SLGEDHILPLAI 81
+G H + +
Sbjct: 233 YVGTIHFIEVPF 244
>gi|323496767|ref|ZP_08101812.1| NAD synthetase [Vibrio sinaloensis DSM 21326]
gi|323318192|gb|EGA71158.1| NAD synthetase [Vibrio sinaloensis DSM 21326]
Length = 275
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 65/203 (32%), Gaps = 35/203 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDR-------FDRVETLSFDYG-QRNKVEL 50
+ + AL+L SGG DS+TC A+D+ + + YG Q+++ E
Sbjct: 31 KLQEAGCKALVLGISGGVDSTTCGRLAQIAIDQLNEETTGGYQFIAVRLPYGEQKDEDEA 90
Query: 51 ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
+ L + + K + H L I + FV G
Sbjct: 91 QLALGFIQPSHSVSVNIKAGVDGIHAATNTALEGTGL----------IPQDAAKVDFVKG 140
Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
N+ A +A + V TD+S +
Sbjct: 141 -NVK--ARARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDLA 187
Query: 171 PLMWLKKYETWKLAQDIGGQDLV 193
PL L K + ++A +G +L+
Sbjct: 188 PLFGLSKRQVREVAATLGAPELL 210
>gi|319956881|ref|YP_004168144.1| argininosuccinate synthase [Nitratifractor salsuginis DSM 16511]
gi|319419285|gb|ADV46395.1| argininosuccinate synthase [Nitratifractor salsuginis DSM 16511]
Length = 443
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K+ A+L +SGG D+S L W D + V T + D GQ +VE R + ++
Sbjct: 4 KEIKKAVLAYSGGLDTSIILKWLQDEYGCEVVTFTADLGQGEEVE-PARQKALQLGIKPE 62
Query: 65 PKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 63 NIFIEDLREEFVRD 76
>gi|240145920|ref|ZP_04744521.1| thiamine biosynthesis/tRNA modification protein ThiI [Roseburia
intestinalis L1-82]
gi|257201985|gb|EEV00270.1| thiamine biosynthesis/tRNA modification protein ThiI [Roseburia
intestinalis L1-82]
gi|291539694|emb|CBL12805.1| thiazole biosynthesis/tRNA modification protein ThiI [Roseburia
intestinalis XB6B4]
Length = 393
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 60/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R ++ F + +K +
Sbjct: 175 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVTIDATYF-----HAPPYTSERAKQKVVDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ K+ + + I I + + + ++ + A
Sbjct: 230 KIVAKYSGPINLHVVNFTDIQLYIYEQCPHEELTIIMRRY-------------MMKLAEH 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A ++ G + + +++ + V+ PL+ K E
Sbjct: 277 FAKENKCLGLITGESIGQVAS---------QTMQSLAATNEVCTMPVYRPLIGFDKQEIV 327
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ I + L E+
Sbjct: 328 EISEKIDAYETSILPFEDC 346
>gi|205814656|sp|B1X0U7|MNMA_CYAA5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 355
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 32/138 (23%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS + + V L+ GQ C + +V+
Sbjct: 2 KKVVVGLSGGVDSSVAAASLHHQGYDVIGLTLWLMKGKGQ----------CCSEGMVDAA 51
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNII----FL 116
+ HI+ L + + N + ++ + T +P R + L
Sbjct: 52 FICEQLGVPHHIVDTRELFE----ANIINYLVSGYESGV--TPLPCSQCNR-AVKFGPML 104
Query: 117 VFAATLAYRLGITNIVIG 134
+A L I G
Sbjct: 105 AYAK---EELNCDRIATG 119
>gi|167756778|ref|ZP_02428905.1| hypothetical protein CLORAM_02327 [Clostridium ramosum DSM 1402]
gi|237734496|ref|ZP_04564977.1| tRNA-specific 2-thiouridylase mnmA [Mollicutes bacterium D7]
gi|167702953|gb|EDS17532.1| hypothetical protein CLORAM_02327 [Clostridium ramosum DSM 1402]
gi|229382316|gb|EEO32407.1| tRNA-specific 2-thiouridylase mnmA [Coprobacillus sp. D7]
Length = 377
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ +L SGG DS+ ++ V +
Sbjct: 1 MSKRVVLGLSGGVDSAVAAYLLKEQGYDVIGV 32
>gi|160883140|ref|ZP_02064143.1| hypothetical protein BACOVA_01109 [Bacteroides ovatus ATCC 8483]
gi|299148187|ref|ZP_07041249.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 3_1_23]
gi|156111365|gb|EDO13110.1| hypothetical protein BACOVA_01109 [Bacteroides ovatus ATCC 8483]
gi|298512948|gb|EFI36835.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 3_1_23]
Length = 361
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MEERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAERMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHI 76
+ + +K+++ ++ I
Sbjct: 59 YVADERIPFKETIVKNFI 76
>gi|68535922|ref|YP_250627.1| argininosuccinate synthase [Corynebacterium jeikeium K411]
gi|260577982|ref|ZP_05845906.1| argininosuccinate synthase [Corynebacterium jeikeium ATCC 43734]
gi|119361267|sp|Q4JVZ8|ASSY_CORJK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|68263521|emb|CAI37009.1| argG [Corynebacterium jeikeium K411]
gi|258603872|gb|EEW17125.1| argininosuccinate synthase [Corynebacterium jeikeium ATCC 43734]
Length = 398
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQ 44
+L +SGG D++ +SW A +R V +S D GQ
Sbjct: 1 MKDRVVLAYSGGLDTTVAISWIAKERNAEVVCVSIDLGQ 39
>gi|15669318|ref|NP_248123.1| GMP synthase subunit B [Methanocaldococcus jannaschii DSM 2661]
gi|13626885|sp|Q58531|GUAAB_METJA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|1592321|gb|AAB99133.1| GMP synthase (guaA) [Methanocaldococcus jannaschii DSM 2661]
Length = 310
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 66/195 (33%), Gaps = 40/195 (20%)
Query: 9 PSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++ SGG DSS D++ + D G K E E E+ +
Sbjct: 22 RKAIIALSGGVDSSVAAVLTHKAIGDKLTAVFVDTGLMRKGERE----------EVEKTF 71
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+D LG + I+ A D ++L + + + +F+ +A +
Sbjct: 72 RDKLGLNLIVVDA--KDRFLNALKGVTDPEEKRKIIGK--------LFIDVFEEIAEDIK 121
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAI-------ETAINLGMESHVTVHTPLMWLKKYET 180
+V G D I A+ GM + V PL L K E
Sbjct: 122 AEVLVQGTIA----------PDWIETQGKIKSHHNVALPHGMV--LEVVEPLRELYKDEV 169
Query: 181 WKLAQDIGGQDLVNL 195
LA+++G D +
Sbjct: 170 RLLAKELGLPDSIVY 184
>gi|262306035|gb|ACY45610.1| gln amidotransferase [Eurytemora affinis]
Length = 191
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELE 51
+LL SGG DSS C + R D++ L D G K E E
Sbjct: 43 NKKVILLISGGVDSSVCAALLKKALRPDQIVALHIDNGFMRKKESE 88
>gi|253999267|ref|YP_003051330.1| argininosuccinate synthase [Methylovorus sp. SIP3-4]
gi|253985946|gb|ACT50803.1| argininosuccinate synthase [Methylovorus sp. SIP3-4]
Length = 407
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ ELE KK +
Sbjct: 1 MSDVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQ--GEELEPAREKAKKFG-V 57
Query: 64 MPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 58 KEIYIDDLREEFVRD 72
>gi|327398348|ref|YP_004339217.1| tRNA-specific 2-thiouridylase mnmA [Hippea maritima DSM 10411]
gi|327180977|gb|AEA33158.1| tRNA-specific 2-thiouridylase mnmA [Hippea maritima DSM 10411]
Length = 338
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
+ SGG DS+T V ++ Y + E + +KI E +
Sbjct: 5 VALSGGVDSATAAFLLKKEGHEVVGITLKLY------DDESYIKQAEKIAEFLG 52
>gi|307720799|ref|YP_003891939.1| argininosuccinate synthase [Sulfurimonas autotrophica DSM 16294]
gi|306978892|gb|ADN08927.1| argininosuccinate synthase [Sulfurimonas autotrophica DSM 16294]
Length = 408
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+KK+ ++L +SGG D+S L W D + V T + D GQ ++E R + ++
Sbjct: 1 MKKSVKKVVLAYSGGLDTSVILKWLQDEYKCEVVTFTADLGQGEELE-PARTKALELGIK 59
Query: 63 LMPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 PENIFIDDLREEFVKD 75
>gi|259503176|ref|ZP_05746078.1| argininosuccinate synthase [Lactobacillus antri DSM 16041]
gi|259168833|gb|EEW53328.1| argininosuccinate synthase [Lactobacillus antri DSM 16041]
Length = 414
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
M I+ +L +SGG D+S ++W +++ V D G
Sbjct: 1 METIVMAKEKIVLAYSGGLDTSVAIAWLMNKGYDVIACCIDVG 43
>gi|224536736|ref|ZP_03677275.1| hypothetical protein BACCELL_01612 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521652|gb|EEF90757.1| hypothetical protein BACCELL_01612 [Bacteroides cellulosilyticus
DSM 14838]
Length = 350
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-------LECRLCV 56
+K A LL SGG DSS + V ++F Y E L RL +
Sbjct: 1 MKSAKRVLLGMSGGTDSSVAAMLLQEAGYEVTGVTFRFYDSEGFEESLDDARNLASRLNI 60
Query: 57 RKKIVELMPKWKDSL 71
I + +++ +
Sbjct: 61 PHIIYDARELFRERI 75
>gi|222099125|ref|YP_002533693.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga neapolitana DSM 4359]
gi|254811469|sp|B9KBD1|MNMA_THENN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|221571515|gb|ACM22327.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga neapolitana DSM 4359]
Length = 358
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DS+ L L V+
Sbjct: 5 VALSGGVDSAVALYLLLKEGHEVKAFH 31
>gi|163754832|ref|ZP_02161953.1| argininosuccinate synthetase [Kordia algicida OT-1]
gi|161324899|gb|EDP96227.1| argininosuccinate synthetase [Kordia algicida OT-1]
Length = 398
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+K +L +SGG D+S C + D V +S + G + E++ K+
Sbjct: 1 MKTPKKLVLAYSGGLDTSYCAVHLSKDLHFEVHAVSINTGGFTQKEIKKIEENAYKM 57
>gi|148642542|ref|YP_001273055.1| PP family ATPase [Methanobrevibacter smithii ATCC 35061]
gi|148551559|gb|ABQ86687.1| ATP-utilizing enzyme, PP-loop superfamily [Methanobrevibacter
smithii ATCC 35061]
Length = 336
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG------QRNKVELECRLCVRKKI 60
K + FSGG DS+ A + D ++ D ++ + +R +I
Sbjct: 15 KNRKVAIAFSGGADSTLLAYLASEVSDDPIAITIDNHIFPTGFIKHCKKTAKEFGIRHQI 74
Query: 61 VELMPKWKDSLGEDH 75
++L ++L +
Sbjct: 75 IDLNFYEHENLLANK 89
>gi|197119634|ref|YP_002140061.1| tRNA-specific 2-thiouridylase MnmA [Geobacter bemidjiensis Bem]
gi|197088994|gb|ACH40265.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase
[Geobacter bemidjiensis Bem]
Length = 355
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ K A+ SGG DSST + ++ V +
Sbjct: 1 MSGNFKGKKVAVA-MSGGVDSSTVAALLKEQGAEVIGI 37
>gi|74204229|dbj|BAE39875.1| unnamed protein product [Mus musculus]
Length = 692
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 10 SALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+L SGG DS+ C + AL++ + + D G K E + KK+
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQDI-AVHIDNGFMRKRESQSVEEALKKL 290
>gi|15606397|ref|NP_213777.1| argininosuccinate synthase [Aquifex aeolicus VF5]
gi|5915698|sp|O67213|ASSY_AQUAE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|2983600|gb|AAC07170.1| argininosuccinate synthase [Aquifex aeolicus VF5]
Length = 401
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 35/139 (25%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
K +L +SGG D+S + W ++ V T + D GQ ++ E+ + I ++
Sbjct: 2 KKKRVILAYSGGLDTSIIVRWLTEKGYEVITYTADVGQGEELSEIPEKARRAGAIEAIVE 61
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT---- 121
K++ E++ LP A+ + + P L A +
Sbjct: 62 DLKETFAENYCLP-------------TLRALALYEGKYP-----------LTAALSRPLI 97
Query: 122 ------LAYRLGITNIVIG 134
A + + G
Sbjct: 98 AERLVYYAEKFNADYVAHG 116
>gi|116618554|ref|YP_818925.1| argininosuccinate synthase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122271246|sp|Q03W70|ASSY_LEUMM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|116097401|gb|ABJ62552.1| argininosuccinate synthase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 408
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 32/195 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
+L +SGG D+S + W D+ V + D GQ K E++ + ++ K
Sbjct: 6 VLAYSGGLDTSVAIPWLKDKGYDVIAVVLDVGQHGKNLNEIQAKALKVGAKQSIVIDAKA 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ ++ P+ + A+ + + +A+
Sbjct: 66 EFADKYVAPVIKANMMYEGEYPMVSALSRP--------------LIIKKLVDIAHENDAV 111
Query: 130 NIVIGV--CETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYETWKLAQ 185
I G D E AI+ ++ + + P+ + E + AQ
Sbjct: 112 AIAHGSTGHGNDQV-----------RFEAAIH-ALDPDMKIEAPIRDFQWSREEEIQYAQ 159
Query: 186 DIGGQDLVNLILEES 200
+ ++L S
Sbjct: 160 EHDVPVPIDLDSPYS 174
>gi|320156716|ref|YP_004189095.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio vulnificus MO6-24/O]
gi|319932028|gb|ADV86892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio vulnificus MO6-24/O]
Length = 374
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNSEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHKINFA 76
>gi|298480213|ref|ZP_06998411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. D22]
gi|298273494|gb|EFI15057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. D22]
Length = 361
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MEERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAERMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHI 76
+ + +K+++ ++ I
Sbjct: 59 YVADERIPFKETIVKNFI 76
>gi|289522842|ref|ZP_06439696.1| ThiI family protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503866|gb|EFD25030.1| ThiI family protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 190
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ K+P ALLLFSGG DS V L+F
Sbjct: 5 QMKNKSPKALLLFSGGLDSLLAGELLRRNGVTVTCLAF 42
>gi|289524536|ref|ZP_06441390.1| ThiI family protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502224|gb|EFD23388.1| ThiI family protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 181
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ K+P ALLLFSGG DS V L+F
Sbjct: 5 QMKNKSPKALLLFSGGLDSLLAGELLRRNGVTVTCLAF 42
>gi|163749516|ref|ZP_02156764.1| thiamine biosynthesis protein ThiI [Shewanella benthica KT99]
gi|161330925|gb|EDQ01852.1| thiamine biosynthesis protein ThiI [Shewanella benthica KT99]
Length = 484
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVE 62
+ L L SGG DS + R R F+ G ++++ + +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEI----------GVKQ 224
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ GE H + + + + +I + + V R + + A +
Sbjct: 225 VAYHLWQKYGESHKVKFISVPF---DPVVTEILERIDNGQMG--VVLKR--MMMRAATKI 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++GI +V G S T+ + I+ E + PL+ + K +
Sbjct: 278 ANKMGIQALVTGEAMGQVSS------QTLTNLN-VIDRCTEQ--LILRPLIAMDKQDIIN 328
Query: 183 LAQDIGGQDLVNLILEES 200
+++ IG +D I E
Sbjct: 329 ISRVIGTEDFSKSIPEYC 346
>gi|39995264|ref|NP_951215.1| argininosuccinate synthase [Geobacter sulfurreducens PCA]
gi|47605391|sp|P61523|ASSY_GEOSL RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|39982026|gb|AAR33488.1| argininosuccinate synthase [Geobacter sulfurreducens PCA]
gi|298504269|gb|ADI82992.1| argininosuccinate synthase [Geobacter sulfurreducens KN400]
Length = 406
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
M K +L +SGG D+S L W + + V S D GQ
Sbjct: 1 MAKAHKDVKKIVLAYSGGLDTSIILKWLKNEYGCEVIAFSADLGQ 45
>gi|315497620|ref|YP_004086424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Asticcacaulis excentricus CB 48]
gi|315415632|gb|ADU12273.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Asticcacaulis excentricus CB 48]
Length = 402
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 28/143 (19%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIV 61
+ + + SGG DSS + V ++ +D+GQ ++ C + I
Sbjct: 31 LSQGARVVAAMSGGVDSSVAAALLHAAGYEVIGVTLQLYDHGQ--ALKKTGACCAGQDIH 88
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVP---------GR 111
+ + ++L S +V + D+ L T VP R
Sbjct: 89 DARVAAEKIGIAHYVLDY-------ESRFKDSVIEEFADSYLRGETPVPCIRCNQTVKFR 141
Query: 112 NIIFLVFAATLAYRLGITNIVIG 134
+++ +A LG + G
Sbjct: 142 DLL------DVARDLGAEAMATG 158
>gi|295086500|emb|CBK68023.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides xylanisolvens XB1A]
Length = 361
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MEERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAERMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHI 76
+ + +K+++ ++ I
Sbjct: 59 YVADERIPFKETIVKNFI 76
>gi|294139896|ref|YP_003555874.1| thiamine biosynthesis protein ThiI [Shewanella violacea DSS12]
gi|293326365|dbj|BAJ01096.1| thiamine biosynthesis protein ThiI [Shewanella violacea DSS12]
Length = 484
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R R F+ G + K++
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGG------DQHEIGVKQVA-- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +++ D + + + + L + + A +A
Sbjct: 227 YHLWQKYGESHKVKFISVPFDPVVTEILEKIDNGQMGVILKR--------MMMRAATKIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++GI +V G S T+ + I+ E + PL+ + K + L
Sbjct: 279 NKMGIQALVTGEAMGQVSS------QTLTNLN-VIDRCTEQ--LILRPLIAMDKQDIINL 329
Query: 184 AQDIGGQDLVNLILEES 200
++ IG +DL I E
Sbjct: 330 SRVIGTEDLSKSIPEYC 346
>gi|170288218|ref|YP_001738456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga sp. RQ2]
gi|205828981|sp|B1L8X5|MNMA_THESQ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|170175721|gb|ACB08773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga sp. RQ2]
Length = 358
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DS+ L L V+
Sbjct: 5 VALSGGVDSAVALYLLLKEGHEVKAFH 31
>gi|72391078|ref|XP_845833.1| GMP synthase [Trypanosoma brucei TREU927]
gi|62176460|gb|AAX70568.1| GMP synthase, putative [Trypanosoma brucei]
gi|70802369|gb|AAZ12274.1| GMP synthase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 658
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
+ + L L SGG DS+ C L +RV + D+G
Sbjct: 217 ERTTQGQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHG 259
>gi|329963139|ref|ZP_08300919.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides fluxus YIT 12057]
gi|328529180|gb|EGF56110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides fluxus YIT 12057]
Length = 359
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 26/136 (19%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF-DYGQR--NKVELECRLCVRKK 59
+ K L+ SGG DS+ TCL ++ + L+ +G + + EL + +
Sbjct: 1 MNKSEKRVLVGMSGGIDSTATCL-MLKEQGYEIVGLTMWVWGDKPVDACELAESMGIGHY 59
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LVF 118
I + ++ + +D I + + PN V N +F
Sbjct: 60 IADERDAFRRIIVQDFI-------------------DEYRQGRTPNPCVMC-NPMFKFRI 99
Query: 119 AATLAYRLGITNIVIG 134
A +LG I G
Sbjct: 100 LMEWADKLGCKYIATG 115
>gi|302341803|ref|YP_003806332.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Desulfarculus baarsii DSM 2075]
gi|301638416|gb|ADK83738.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
-methyltransferase [Desulfarculus baarsii DSM 2075]
Length = 329
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 44/136 (32%), Gaps = 23/136 (16%)
Query: 1 MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
MN I K P +AL L+SGG DS + ++F + R+
Sbjct: 1 MNHITAKHPATALGLYSGGLDSMLAALVLRRAGVAAQVVTF------QSPFFAAEAARRS 54
Query: 60 IVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ L +P LGED++ + S + V L
Sbjct: 55 ALALDLPHHVVELGEDYLAMVQHPPRGHGSQMNPCVDCH---------------AFMLAR 99
Query: 119 AATLAYRLGITNIVIG 134
A L LG+ + G
Sbjct: 100 AGRLMDELGLDFLFTG 115
>gi|293370352|ref|ZP_06616907.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides ovatus SD CMC 3f]
gi|292634573|gb|EFF53107.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides ovatus SD CMC 3f]
Length = 361
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MEERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAERMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHI 76
+ + +K+++ ++ I
Sbjct: 59 YVADERIPFKETIVKNFI 76
>gi|289449929|ref|YP_003475447.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184476|gb|ADC90901.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 391
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 57/184 (30%), Gaps = 29/184 (15%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKWKDSLGEDHI 76
DS R +E + F + +K + E++ + L +
Sbjct: 191 IDSPVAGYMMASRGMELEAIYF-----HTYPYTSDRAKQKVIDLAEILTDYCGRLKLHIV 245
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
I I ++ + + ++ I + A +A + ++ G
Sbjct: 246 DFTDIQLAIRDNAPQDMMTIVMRR-------------IMMRIAEQVAVKNQARCLITGES 292
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
+ + +E + ++ + PL+ K +T +++ IG D L
Sbjct: 293 LGQVAS---------QTLEALCTTDVVVNMPIFRPLIGTDKDDTVNISKRIGAFDTSILP 343
Query: 197 LEES 200
E+
Sbjct: 344 YEDC 347
>gi|261329284|emb|CBH12265.1| GMP synthase, putative [Trypanosoma brucei gambiense DAL972]
Length = 658
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
+ + L L SGG DS+ C L +RV + D+G
Sbjct: 217 ERTTQGQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHG 259
>gi|229585301|ref|YP_002843803.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus M.16.27]
gi|259518596|sp|C3MZC6|THII_SULIA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|228020351|gb|ACP55758.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
islandicus M.16.27]
Length = 373
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 31/185 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKV-ELECRLCVRKKIVELMPKW 67
++LFSGG DS + R L+F+ G ++ LE +RK K
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
G D ++ L+ + + + K + A L +
Sbjct: 232 FIVNGTDVLIKLSQIEKRNRVVMLKR--------------------VMYKVAERLCDKAN 271
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+ +I G + S + + + PL+ K E +LA+ I
Sbjct: 272 VKSITTGESLSQVSS---------QTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322
Query: 188 GGQDL 192
G +
Sbjct: 323 GTYEY 327
>gi|195498973|ref|XP_002096752.1| GE25842 [Drosophila yakuba]
gi|194182853|gb|EDW96464.1| GE25842 [Drosophila yakuba]
Length = 419
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W LD+ V + D GQ+ E + KK++
Sbjct: 2 SRETVILAYSGGLDTSCILKWLLDKQYEVVCVLADVGQKEDFTAAEKKALKIGAKKVI-- 59
Query: 64 MPKWKDSLGEDHILPLAILGDI 85
+ K S ED+I P +G +
Sbjct: 60 VADVKQSFVEDYIWPAVQMGLV 81
>gi|22797882|emb|CAD42690.1| putative asparagine synthetase [uncultured crenarchaeote]
Length = 563
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 20/144 (13%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + ++FSGG DS A V C K
Sbjct: 261 MRKRVSDFKKIGIVFSGGIDSVIVAYLAKQMAPEVI---------------CYTSGIKGS 305
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+++ + + D L + + + S + I+D+N+ V I + A
Sbjct: 306 SDILNSLEIAEKLDLKLEIEQMTESDVESTIPKIISIIEDDNMGQVEV----AIPIYGAV 361
Query: 121 TLAYRLGITNIVIGVCETD-YSGY 143
LA+ GI ++ G + + GY
Sbjct: 362 KLAHEQGIRVMLTGQGADELFGGY 385
>gi|15598721|ref|NP_252215.1| argininosuccinate synthase [Pseudomonas aeruginosa PAO1]
gi|107103037|ref|ZP_01366955.1| hypothetical protein PaerPA_01004106 [Pseudomonas aeruginosa
PACS2]
gi|116051524|ref|YP_789640.1| argininosuccinate synthase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218890248|ref|YP_002439112.1| argininosuccinate synthase [Pseudomonas aeruginosa LESB58]
gi|254236450|ref|ZP_04929773.1| argininosuccinate synthase [Pseudomonas aeruginosa C3719]
gi|254242185|ref|ZP_04935507.1| argininosuccinate synthase [Pseudomonas aeruginosa 2192]
gi|296387972|ref|ZP_06877447.1| argininosuccinate synthase [Pseudomonas aeruginosa PAb1]
gi|313108870|ref|ZP_07794853.1| argininosuccinate synthase [Pseudomonas aeruginosa 39016]
gi|24211531|sp|Q9HY84|ASSY_PSEAE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|122260664|sp|Q02QZ6|ASSY_PSEAB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|226729198|sp|B7UVV5|ASSY_PSEA8 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|9949674|gb|AAG06913.1|AE004773_2 argininosuccinate synthase [Pseudomonas aeruginosa PAO1]
gi|115586745|gb|ABJ12760.1| argininosuccinate synthase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168381|gb|EAZ53892.1| argininosuccinate synthase [Pseudomonas aeruginosa C3719]
gi|126195563|gb|EAZ59626.1| argininosuccinate synthase [Pseudomonas aeruginosa 2192]
gi|218770471|emb|CAW26236.1| argininosuccinate synthase [Pseudomonas aeruginosa LESB58]
gi|310881355|gb|EFQ39949.1| argininosuccinate synthase [Pseudomonas aeruginosa 39016]
Length = 405
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKARAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|309790953|ref|ZP_07685494.1| argininosuccinate synthase [Oscillochloris trichoides DG6]
gi|308226985|gb|EFO80672.1| argininosuccinate synthase [Oscillochloris trichoides DG6]
Length = 400
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELMPK 66
A+L +SGG D+S + W + + V D GQ ++E LE + ++
Sbjct: 7 KKAVLAYSGGLDTSVIVPWLRENYGCEVICFCADLGQAEELEGLEEKALASGASKLIVRD 66
Query: 67 WKDSLGEDHILPLAILGDI 85
++ D+ILP G I
Sbjct: 67 LREEFMRDYILPTLQAGAI 85
>gi|307353027|ref|YP_003894078.1| phosphoadenosine phosphosulfate reductase [Methanoplanus
petrolearius DSM 11571]
gi|307156260|gb|ADN35640.1| phosphoadenosine phosphosulfate reductase [Methanoplanus
petrolearius DSM 11571]
Length = 517
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDR 34
+K P+A + FSGG+DS+ L A
Sbjct: 247 MKDRPTANVSFSGGKDSTVVLHLARKAGIE 276
>gi|292670858|ref|ZP_06604284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Selenomonas noxia ATCC 43541]
gi|292647479|gb|EFF65451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Selenomonas noxia ATCC 43541]
Length = 365
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
M +KK ++ SGG DSS + +R V ++
Sbjct: 1 MERKMKK-ERVVVAMSGGVDSSLAAALLQERGYDVVGVTMR 40
>gi|262408193|ref|ZP_06084740.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
gi|294806750|ref|ZP_06765577.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides xylanisolvens SD CC 1b]
gi|262353745|gb|EEZ02838.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
gi|294446032|gb|EFG14672.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides xylanisolvens SD CC 1b]
Length = 361
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MEERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAERMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHI 76
+ + +K+++ ++ I
Sbjct: 59 YVADERIPFKETIVKNFI 76
>gi|227872028|ref|ZP_03990409.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oribacterium sinus F0268]
gi|227842120|gb|EEJ52369.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oribacterium sinus F0268]
Length = 362
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKW 67
AL+ SGG DSS + ++ ++ Y R C + VE +
Sbjct: 2 EKALIAMSGGVDSSVAAALMQEKGYDCIGITMKLYDSETGQACRSRTCCTLEDVEDARQV 61
Query: 68 KDSL 71
+L
Sbjct: 62 ASTL 65
>gi|254171778|ref|ZP_04878454.1| GMP synthase, C-terminal domain [Thermococcus sp. AM4]
gi|214033674|gb|EEB74500.1| GMP synthase, C-terminal domain [Thermococcus sp. AM4]
Length = 307
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 63/187 (33%), Gaps = 29/187 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSST A DR+ + + G K E E V K +
Sbjct: 21 KAIIALSGGVDSSTAAILAHKAIGDRLHAVFVNTGFMRKGEPE---FVVKTFRDEFGLNL 77
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ A+ G K + GR +F+ +A +
Sbjct: 78 HYVDASERFFKALKGVTDPEEKRKII---------------GR--VFIEVFEEIAKEINA 120
Query: 129 TNIVIGVCETDYSGYPDC--RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ G PD I++ L ++ + PL L K E +LA++
Sbjct: 121 DFLIQGTIA------PDWIESRGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVRELAKE 174
Query: 187 IGGQDLV 193
+G + +
Sbjct: 175 LGLPEKI 181
>gi|194334691|ref|YP_002016551.1| tRNA-specific 2-thiouridylase MnmA [Prosthecochloris aestuarii
DSM 271]
gi|194312509|gb|ACF46904.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prosthecochloris aestuarii DSM 271]
Length = 362
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
MN I + ++ SGG DS+ +++ V L
Sbjct: 1 MNATIS-PTTVIVGLSGGVDSAVAACLLIEQGYSVTGLHIR 40
>gi|156549959|ref|XP_001603273.1| PREDICTED: similar to Argininosuccinate synthetase 1 [Nasonia
vitripennis]
Length = 427
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV---RK 58
+ + ++ +L +SGG D+S L W +++ V + GQ E + K
Sbjct: 14 STMEEERKKVILAYSGGLDTSCILLWLIEKGYDVIAYVANIGQDEDFEAAREKALSIGAK 73
Query: 59 KIV 61
K++
Sbjct: 74 KVI 76
>gi|121997522|ref|YP_001002309.1| argininosuccinate synthase [Halorhodospira halophila SL1]
gi|166219970|sp|A1WUZ5|ASSY_HALHL RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|121588927|gb|ABM61507.1| argininosuccinate synthase [Halorhodospira halophila SL1]
Length = 403
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + + V T + D GQ ++E R I E+
Sbjct: 1 MSDVKKVVLAYSGGLDTSVILKWLEETYGCEVVTFTADLGQGEELEPARRKAEAFGIREI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|331645597|ref|ZP_08346701.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli M605]
gi|330910215|gb|EGH38725.1| thiamine biosynthesis protein thiI [Escherichia coli AA86]
gi|331045759|gb|EGI17885.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli M605]
Length = 482
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 56/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A IG +D
Sbjct: 328 ASQIGTEDFART 339
>gi|260889979|ref|ZP_05901242.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptotrichia hofstadii F0254]
gi|260860585|gb|EEX75085.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptotrichia hofstadii F0254]
Length = 371
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
MN + ++ SGG DSS + V ++
Sbjct: 7 MNKKL-DEKKVVVGMSGGIDSSVAALLLKQQGYEVIGVT 44
>gi|291300512|ref|YP_003511790.1| hypothetical protein Snas_3026 [Stackebrandtia nassauensis DSM
44728]
gi|290569732|gb|ADD42697.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
44728]
Length = 420
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 154 IETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYE 213
+ A+ ++ V P L K E + A D G + + L + TC +
Sbjct: 272 LANALLDSLDVDTRVVNPYAELTKGEVCERAVDAGWRRSL---LGRTITCVNPDKKSSGR 328
Query: 214 WGYGCNSCPACYLRQKGWMEFK---EKYQD 240
+G C C C +R + +Y+D
Sbjct: 329 FGN-CGYCRHCLVRHAALVRVGGDLTEYRD 357
>gi|315638034|ref|ZP_07893219.1| ThiI family protein [Campylobacter upsaliensis JV21]
gi|315481882|gb|EFU72501.1| ThiI family protein [Campylobacter upsaliensis JV21]
Length = 327
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKKIVEL 63
AL LFSGG DS + + V+ L+ + +G R+ E R E
Sbjct: 2 KALALFSGGLDSLLAMKLITQQGIAVKALNINIGFGSRSDKSEEMRRRAALVGAEF 57
>gi|315637305|ref|ZP_07892524.1| argininosuccinate synthase [Arcobacter butzleri JV22]
gi|315478469|gb|EFU69183.1| argininosuccinate synthase [Arcobacter butzleri JV22]
Length = 413
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
K +L +SGG D+S L W D + V T + D GQ +VE + + I
Sbjct: 4 KDIKKVVLAYSGGLDTSIILKWLQDEYNAEVITFTADLGQGEEVEPARQKAIACGIKPEN 63
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ K+ +D++ P+ I ++
Sbjct: 64 VFILDIKEEFVKDYVFPMFRANAIYEGEYLLGTSIA 99
>gi|298387127|ref|ZP_06996681.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 1_1_14]
gi|298260277|gb|EFI03147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 1_1_14]
Length = 369
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 19/79 (24%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG----------QRNKVEL--- 50
+++ LL SGG DSS L+ V ++F Y R+ E
Sbjct: 1 MEENKRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTEYLEDARHLAERLGI 60
Query: 51 -----ECRLCVRKKIVELM 64
+ R RK+I+E
Sbjct: 61 RHITYDAREIFRKQIIEYF 79
>gi|323527176|ref|YP_004229329.1| argininosuccinate synthase [Burkholderia sp. CCGE1001]
gi|323384178|gb|ADX56269.1| argininosuccinate synthase [Burkholderia sp. CCGE1001]
Length = 408
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D +D V T + D GQ ++E R + ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-PARKKALQLGIKQ 59
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 60 ENIFIEDLREEFVRD 74
>gi|157737522|ref|YP_001490205.1| argininosuccinate synthase [Arcobacter butzleri RM4018]
gi|172045650|sp|A8EUB2|ASSY_ARCB4 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|157699376|gb|ABV67536.1| argininosuccinate synthase [Arcobacter butzleri RM4018]
Length = 413
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
K +L +SGG D+S L W D + V T + D GQ +VE + + I
Sbjct: 4 KDIKKVVLAYSGGLDTSIILKWLQDEYNAEVITFTADLGQGEEVEPARQKAIACGIKPEN 63
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ K+ +D++ P+ I ++
Sbjct: 64 VFILDIKEEFVKDYVFPMFRANAIYEGEYLLGTSIA 99
>gi|145298399|ref|YP_001141240.1| tRNA-specific 2-thiouridylase MnmA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166234842|sp|A4SKS0|MNMA_AERS4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|142851171|gb|ABO89492.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 368
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 52/152 (34%), Gaps = 36/152 (23%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELECRLCVRKKI 60
++ SGG DSS + +VE L +Y +L V K+
Sbjct: 8 KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDTDEYCS-ASQDLADAKAVCDKL 66
Query: 61 ------VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
+ ++ D++ E H L G + + N +K +
Sbjct: 67 GMKLHTINFAAEYWDNVFE-HFLEEYKAGRTPNPDILCNKEIKFKA-------------- 111
Query: 115 FLVFAATLAYRLGITNIVIG--VCETDYSGYP 144
FL FA A LG T I G V D +G+P
Sbjct: 112 FLEFA---AEELGATYIATGHYVRRDDSTGHP 140
>gi|57506130|ref|ZP_00372052.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
gi|57015614|gb|EAL52406.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
Length = 327
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKKIVEL 63
AL LFSGG DS + + V+ L+ + +G R+ E R E
Sbjct: 2 KALALFSGGLDSLLAMKLITQQGIAVKALNINIGFGSRSDKSEEMRRRAALVGAEF 57
>gi|258563424|ref|XP_002582457.1| argininosuccinate synthase [Uncinocarpus reesii 1704]
gi|237907964|gb|EEP82365.1| argininosuccinate synthase [Uncinocarpus reesii 1704]
Length = 91
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ LL +SGG D+S L+W +++ V D GQ + E + KK+V
Sbjct: 1 MANKEKVLLAYSGGLDTSCILAWLIEQGHEVVCFLADVGQAEDFKEAEKKALAIGAKKLV 60
>gi|315230077|ref|YP_004070513.1| TilS-like tRNA(Ile)-lysidine synthetase [Thermococcus barophilus
MP]
gi|315183105|gb|ADT83290.1| TilS-like tRNA(Ile)-lysidine synthetase [Thermococcus barophilus
MP]
Length = 269
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
LL+FSGG+DSS L V ++F
Sbjct: 20 KKKILLMFSGGKDSSLALYIMKKAGLDVSAITF 52
>gi|15643286|ref|NP_228330.1| tRNA-specific 2-thiouridylase MnmA [Thermotoga maritima MSB8]
gi|8134745|sp|Q9WYZ0|MNMA_THEMA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|4981033|gb|AAD35605.1|AE001728_6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermotoga maritima MSB8]
Length = 358
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DS+ L L V+
Sbjct: 5 VALSGGVDSAVALYLLLKEGHEVKAFH 31
>gi|14591154|ref|NP_143230.1| GMP synthase subunit B [Pyrococcus horikoshii OT3]
gi|13626774|sp|O59072|GUAAB_PYRHO RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|119389212|pdb|2DPL|A Chain A, Crystal Structure Of The Gmp Synthase From Pyrococcus
Horikoshii Ot3
gi|119389213|pdb|2DPL|B Chain B, Crystal Structure Of The Gmp Synthase From Pyrococcus
Horikoshii Ot3
gi|188036150|pdb|2Z0C|A Chain A, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
Horikoshii Ot3
gi|188036151|pdb|2Z0C|B Chain B, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
Horikoshii Ot3
gi|254574796|pdb|3A4I|A Chain A, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
Horikoshii Ot3
gi|254574797|pdb|3A4I|B Chain B, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
Horikoshii Ot3
gi|3257770|dbj|BAA30453.1| 308aa long hypothetical GMP synthase [Pyrococcus horikoshii OT3]
Length = 308
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 65/187 (34%), Gaps = 29/187 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSST A DR+ + + G K E E V K +
Sbjct: 22 KAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPE---FVVKTFRDEFGMNL 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ A+ G K + GR +F+ +A ++G
Sbjct: 79 HYVDAQDRFFSALKGVTDPEEKRKII---------------GR--VFIEVFEEVAKKIGA 121
Query: 129 TNIVIGVCETDYSGYPDC--RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ G PD I++ L + ++ + PL L K E +LA+
Sbjct: 122 EYLIQGTIA------PDWIESQGKIKSHHNVGGLPEKLNLKLIEPLRDLYKDEVRELAKF 175
Query: 187 IGGQDLV 193
+G + +
Sbjct: 176 LGLPEKI 182
>gi|329955642|ref|ZP_08296550.1| tRNA(Ile)-lysidine synthetase [Bacteroides clarus YIT 12056]
gi|328526045|gb|EGF53069.1| tRNA(Ile)-lysidine synthetase [Bacteroides clarus YIT 12056]
Length = 423
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 55/197 (27%), Gaps = 43/197 (21%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A L+ SGG DS L E ++ R + VR+ +
Sbjct: 19 ADKILVALSGGADSVALLCLLQTLGYECEAAHCNFHLRGEESDRDETFVRQLCAKRQVPL 78
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYRL 126
HI+ L ++ +++++++ L + R +
Sbjct: 79 -------HIVHFDTL----RTAEERHISIEMAARELRYEWFEKIRT------------KS 115
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKK 177
I + + D + + + G + + PL+ L +
Sbjct: 116 NANVIAVAHHQDDS----------VETLLLNLIRGTGINGLRGIRPKNGHIVRPLLCLDR 165
Query: 178 YETWKLAQDIGGQDLVN 194
E IG + +
Sbjct: 166 NEIINYLNRIGQDYVTD 182
>gi|297185882|gb|ADI24231.1| argininosuccinate synthase [Glomus intraradices]
Length = 412
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
LL +SGG D+S L W +++ V + GQ E + K + K
Sbjct: 5 RVLLAYSGGLDTSCILVWLIEQGYEVIAYMANIGQ----EEDFEAAREKALKIGAKKVYI 60
Query: 70 SLGEDHILPLAILGDISHSSLTKNV 94
+ I I +++ +NV
Sbjct: 61 EDLRQIYVDELIFPAIQANAIYENV 85
>gi|262306071|gb|ACY45628.1| gln amidotransferase [Loxothylacus texanus]
Length = 197
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
LLL SGG DS+ C + DRV TL D G
Sbjct: 45 KVLLLVSGGVDSTVCAALLHKALGSDRVITLHIDNG 80
>gi|148244833|ref|YP_001219527.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Vesicomyosocius
okutanii HA]
gi|166235089|sp|A5CW80|MNMA_VESOH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|146326660|dbj|BAF61803.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Candidatus Vesicomyosocius okutanii HA]
Length = 362
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS L + +VE L
Sbjct: 2 KNLNKNTKIIVGLSGGVDSSVTALLLLKQGYQVEAL 37
>gi|330836678|ref|YP_004411319.1| argininosuccinate synthase [Spirochaeta coccoides DSM 17374]
gi|329748581|gb|AEC01937.1| argininosuccinate synthase [Spirochaeta coccoides DSM 17374]
Length = 413
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
+L +SGG D+S L W ++ V D GQ +E + +
Sbjct: 2 SKEKVILAYSGGLDTSVILKWLANKGYEVIAYVADVGQNEDYKAIEKKAFATGASKVYIE 61
Query: 66 KWKDSLGEDHILP 78
+ L D++ P
Sbjct: 62 DLRKELVTDYVFP 74
>gi|326403273|ref|YP_004283354.1| argininosuccinate synthase [Acidiphilium multivorum AIU301]
gi|325050134|dbj|BAJ80472.1| argininosuccinate synthase [Acidiphilium multivorum AIU301]
Length = 409
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 22/132 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
+L +SGG D+S L W +R V T + D GQ ++E R + E+
Sbjct: 7 KKVVLAYSGGLDTSVILRWLQTERGAEVVTFTADLGQGEELEPARRKAEMFGVKEIFVED 66
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---ATLA 123
+++ +D + P+ + ++ + A +A
Sbjct: 67 LRETFVKDFVFPMFRANALYEGQYLLGTSIARP-----------------LIAQRQIEIA 109
Query: 124 YRLGITNIVIGV 135
+G + G
Sbjct: 110 EAVGADAVAHGA 121
>gi|322498973|emb|CBZ34045.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 656
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
+ L L SGG DS+ C L +RV + D+G
Sbjct: 217 ERTSDGQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHG 259
>gi|298369001|ref|ZP_06980319.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria sp. oral taxon 014 str. F0314]
gi|298283004|gb|EFI24491.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria sp. oral taxon 014 str. F0314]
Length = 367
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN I + ++ SGG DSS + + RV + Q + + C K+
Sbjct: 1 MN-IENTPQNIIVGLSGGVDSSVTAALLKQQGHRVHGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D LG D + + + + PN V N F
Sbjct: 57 SFDAIAVADILGID--IDIVNFAAQYKDKVFAYFLKEYGAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L A G I G
Sbjct: 114 LD----YALEQGADTIATG 128
>gi|227532775|ref|ZP_03962824.1| argininosuccinate synthase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227189609|gb|EEI69676.1| argininosuccinate synthase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 406
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+L +SGG D+S + W D+ V + + GQ
Sbjct: 1 MTEKIVLAYSGGLDTSVAIPWLKDKGYEVIAVVLNVGQ 38
>gi|191639758|ref|YP_001988924.1| argininosuccinate synthase [Lactobacillus casei BL23]
gi|190714060|emb|CAQ68066.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
[Lactobacillus casei BL23]
gi|327383871|gb|AEA55347.1| Argininosuccinate synthase [Lactobacillus casei LC2W]
gi|327387052|gb|AEA58526.1| Argininosuccinate synthase [Lactobacillus casei BD-II]
Length = 406
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+L +SGG D+S + W D+ V + + GQ
Sbjct: 1 MTEKIVLAYSGGLDTSVAIPWLKDKGYEVIAVVLNVGQ 38
>gi|148259759|ref|YP_001233886.1| argininosuccinate synthase [Acidiphilium cryptum JF-5]
gi|172047764|sp|A5FWI5|ASSY_ACICJ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|146401440|gb|ABQ29967.1| argininosuccinate synthase [Acidiphilium cryptum JF-5]
Length = 409
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 22/132 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
+L +SGG D+S L W +R V T + D GQ ++E R + E+
Sbjct: 7 KKVVLAYSGGLDTSVILRWLQTERGAEVVTFTADLGQGEELEPARRKAEMFGVKEIFVED 66
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---ATLA 123
+++ +D + P+ + ++ + A +A
Sbjct: 67 LRETFVKDFVFPMFRANALYEGQYLLGTSIARP-----------------LIAQRQIEIA 109
Query: 124 YRLGITNIVIGV 135
+G + G
Sbjct: 110 EAVGADAVAHGA 121
>gi|116496233|ref|YP_807967.1| argininosuccinate synthase [Lactobacillus casei ATCC 334]
gi|239630684|ref|ZP_04673715.1| argininosuccinate synthase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301067835|ref|YP_003789858.1| argininosuccinate synthase [Lactobacillus casei str. Zhang]
gi|122262369|sp|Q033U7|ASSY_LACC3 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|116106383|gb|ABJ71525.1| argininosuccinate synthase [Lactobacillus casei ATCC 334]
gi|239526967|gb|EEQ65968.1| argininosuccinate synthase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300440242|gb|ADK20008.1| Argininosuccinate synthase [Lactobacillus casei str. Zhang]
Length = 406
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+L +SGG D+S + W D+ V + + GQ
Sbjct: 1 MTEKIVLAYSGGLDTSVAIPWLKDKGYEVIAVVLNVGQ 38
>gi|241668630|ref|ZP_04756208.1| hypothetical protein FphipA2_07676 [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254877163|ref|ZP_05249873.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843184|gb|EET21598.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 348
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKI 60
+ KK A+ L SGG DS L++ VE ++F G + + + + ++K
Sbjct: 1 MEKKQVKAVSLISGGLDSMLATKMMLEQGIHVEGINFFTGFCVEGHTHAIRKQDKEKQKR 60
Query: 61 VELMPKWKDSLGEDHILPL 79
+ + + HI+ +
Sbjct: 61 NNSLWVAEQLGIKLHIIDV 79
>gi|241767515|ref|ZP_04765194.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidovorax delafieldii 2AN]
gi|241361655|gb|EER58004.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidovorax delafieldii 2AN]
Length = 310
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M K+ ++ SGG DS+ + V +
Sbjct: 1 MTAPTKQ--RVVVGLSGGVDSAVTAYLLKQQGHEVVGI 36
>gi|239787342|emb|CAX83819.1| tRNA-specific 2-thiouridylase MnmA [uncultured bacterium]
Length = 366
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 4/101 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVEL 63
I K + SGG DSS + +V ++ Y ++ C + I +
Sbjct: 13 IPKGARVAVAMSGGVDSSVVAALMHKEGYQVVGITLQLYDHGEAIQKTKTCCAGQDIYDA 72
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
+ ++L I + + A P
Sbjct: 73 RRVSEKIGFHHYVLD---YESIFKEEVIDDFADSYLRGETP 110
>gi|167628090|ref|YP_001678590.1| hypothetical protein Fphi_1863 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167598091|gb|ABZ88089.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 421
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKI 60
+ KK A+ L SGG DS L++ VE ++F G + + + + ++K
Sbjct: 1 MEKKQVKAVSLISGGLDSMLATKMMLEQGIHVEGINFFTGFCVEGHTHAIRKQDKEKQKR 60
Query: 61 VELMPKWKDSLGEDHILPL 79
+ + + HI+ +
Sbjct: 61 NNSLWVAEQLGIKLHIIDV 79
>gi|33151616|ref|NP_872969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus ducreyi 35000HP]
gi|71153355|sp|Q7U342|MNMA_HAEDU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|33147837|gb|AAP95358.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus ducreyi 35000HP]
Length = 384
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 46/144 (31%), Gaps = 34/144 (23%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELECRLCV 56
K ++ SGG DSS + +VE L DY +L V
Sbjct: 22 NKNKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNWEEDDDTDYC-TAAADLADAQNV 80
Query: 57 RKKI------VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
++ + ++ D++ E H L G + + N +K +
Sbjct: 81 ADRLGIKLHKINFAAEYWDNVFE-HFLAEYQAGRTPNPDILCNKEIKFKA---------- 129
Query: 111 RNIIFLVFAATLAYRLGITNIVIG 134
FL +A A LG I G
Sbjct: 130 ----FLEYA---AEDLGADYIATG 146
>gi|325970705|ref|YP_004246896.1| tRNA-specific 2-thiouridylase mnmA [Spirochaeta sp. Buddy]
gi|324025943|gb|ADY12702.1| tRNA-specific 2-thiouridylase mnmA [Spirochaeta sp. Buddy]
Length = 356
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 10/103 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVR----KKIVE 62
L+ SGG DSS + V ++ + L C + I+
Sbjct: 2 KVLVGMSGGIDSSVAAYLLKQQGHEVMGVTMTIWNKRSHLTRPLNSTSCFAPDKTEDIIA 61
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+ + E +L L+ D+ + N + D PN
Sbjct: 62 IKKICEKIGIEHQVLELS---DLFEEIVLANFKTEYMDGRTPN 101
>gi|302325766|gb|ADL24967.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fibrobacter succinogenes subsp. succinogenes S85]
Length = 390
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 13/35 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + + SGG DS+ + V ++
Sbjct: 25 MSQKKRVAVGLSGGVDSALSAYLLKKQGYEVVGMT 59
>gi|221233878|ref|YP_002516314.1| tRNA-specific 2-thiouridylase MnmA [Caulobacter crescentus NA1000]
gi|220963050|gb|ACL94406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caulobacter crescentus NA1000]
Length = 410
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + V ++ Y + + C + I++ +
Sbjct: 39 RIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDARMAAE 98
Query: 69 DSLGEDHILP 78
++L
Sbjct: 99 RIGIPHYVLD 108
>gi|146086376|ref|XP_001465531.1| GMP synthase [Leishmania infantum JPCM5]
gi|321399442|emb|CBZ08655.1| putative GMP synthase [Leishmania infantum JPCM5]
Length = 656
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
+ L L SGG DS+ C L +RV + D+G
Sbjct: 217 ERTSDGQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHG 259
>gi|53712709|ref|YP_098701.1| putative cell-cycle protein [Bacteroides fragilis YCH46]
gi|61216469|sp|Q64WF9|TILS_BACFR RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|52215574|dbj|BAD48167.1| putative cell-cycle protein [Bacteroides fragilis YCH46]
Length = 435
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 41/184 (22%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DS L L E ++ R E + +++
Sbjct: 19 NDKVLVTLSGGADSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCH----- 72
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E +L D + + K++++++ L + TL +
Sbjct: 73 -----ESGVLLHIEHFDTTQYATKKHISIEMAARELRYEWFE-----------TLRKQRE 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
+ I + D + + + G + + PL+ L +
Sbjct: 117 ASVIATAHHKDDS----------VETVLLNLIRGTGINGLLGIRPRNGNIVRPLLCLSRE 166
Query: 179 ETWK 182
E
Sbjct: 167 EIIA 170
>gi|330998820|ref|ZP_08322547.1| tRNA(Ile)-lysidine synthetase [Parasutterella excrementihominis YIT
11859]
gi|329576034|gb|EGG57553.1| tRNA(Ile)-lysidine synthetase [Parasutterella excrementihominis YIT
11859]
Length = 478
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 64/213 (30%), Gaps = 56/213 (26%)
Query: 6 KKAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYG-QRNKVELECRLCVRKKI 60
+K + ++ FSGG DSS L + + + +G ++ E
Sbjct: 45 EKPINVIVAFSGGLDSSVLLYAVSQLKGKSYGEITAVHVHHGLSKHANEW---------- 94
Query: 61 VELMPKWKDSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
E + G +L + G + + + ++ +
Sbjct: 95 AEFCEERAKKCGVRFVLRKVTVPSGGAGFEAEARQLRYEVLEEE---------------- 138
Query: 119 AATLAYRLGITNIVIGVCETD-----------YSGYPDCRHDTIRAIETAINLGMESHVT 167
A + I+ D SG + A+ + + T
Sbjct: 139 ----ARKAAADAILTAHHLDDQLETFLIQWMRGSG-----PAGLAAMPPLLR---KDGCT 186
Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLVNLILEES 200
+ PL+ ++ E + A+ G + + + E++
Sbjct: 187 IMRPLLGFQRTELERFAEIRGIKWVEDESNEDT 219
>gi|306819900|ref|ZP_07453553.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
yurii subsp. margaretiae ATCC 43715]
gi|304552057|gb|EFM39995.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
yurii subsp. margaretiae ATCC 43715]
Length = 392
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 34/184 (18%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKWKDS 70
+L SGG DS R +E + F + +K +V + +
Sbjct: 183 VLISGGIDSPVATYLMARRGLFIEAVHF-----HSYPFTNERSKQKVIDLVTHLTSYCGR 237
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L I +I+ + + + + + A +A T+
Sbjct: 238 IRLHLVNLLDIQKEINEKCPGEYMTILSRR-------------FMMRIAQEIANDYECTS 284
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYETWKLAQDI 187
++ G + + + L ++ V V PL+ ++K + ++A+ I
Sbjct: 285 LITGESLGQ-----------VASQTSLGLLATDNVVNTMPVFRPLIAMEKTQIIEIAKKI 333
Query: 188 GGQD 191
G D
Sbjct: 334 GTYD 337
>gi|262306099|gb|ACY45642.1| gln amidotransferase [Prokoenenia wheeleri]
Length = 196
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYG 43
L+L SGG DS+ C + V + D G
Sbjct: 45 KVLMLLSGGVDSTVCAALLHKSLKEGQVIAVHIDNG 80
>gi|240102817|ref|YP_002959126.1| GMP synthase subunit B [Thermococcus gammatolerans EJ3]
gi|239910371|gb|ACS33262.1| GMP synthase [glutamine-hydrolyzing] pyrophosphatase subunit (C
terminal domain) (guaA_C) [Thermococcus gammatolerans
EJ3]
Length = 311
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 63/187 (33%), Gaps = 29/187 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSST A DR+ + + G K E E V K +
Sbjct: 25 KAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFMRKGEPE---FVVKTFRDEFGLNL 81
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ A+ G K + GR +F+ +A +
Sbjct: 82 HYVDASERFFKALKGVTDPEEKRKII---------------GR--VFIEVFEEIAKEINA 124
Query: 129 TNIVIGVCETDYSGYPDC--RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ G PD I++ L ++ + PL L K E +LA++
Sbjct: 125 DFLIQGTIA------PDWIESKGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVRELAKE 178
Query: 187 IGGQDLV 193
+G + +
Sbjct: 179 LGLPEKI 185
>gi|187777280|ref|ZP_02993753.1| hypothetical protein CLOSPO_00832 [Clostridium sporogenes ATCC
15579]
gi|187774208|gb|EDU38010.1| hypothetical protein CLOSPO_00832 [Clostridium sporogenes ATCC
15579]
Length = 333
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
M + AL + SGG DS+ D+ V + F
Sbjct: 1 MKRRVSLMTRALAMISGGLDSTLAAKLIKDQGIEVIGICFR 41
>gi|91215966|ref|ZP_01252935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Psychroflexus torquis ATCC 700755]
gi|91185943|gb|EAS72317.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Psychroflexus torquis ATCC 700755]
Length = 397
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 KRVVVGLSGGVDSSVAAYLCKEKGYEVIGL 31
>gi|302382556|ref|YP_003818379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brevundimonas subvibrioides ATCC 15264]
gi|302193184|gb|ADL00756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Brevundimonas subvibrioides ATCC 15264]
Length = 407
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + V ++ Y ++ + C + I + +
Sbjct: 41 RVVAAMSGGVDSTVVAALLHKAGYDVVGVTLQLYDHGAALKKKGACCAGQDIHDARLAAE 100
Query: 69 DSLGEDHILP 78
++L
Sbjct: 101 MLGIPHYVLD 110
>gi|294645485|ref|ZP_06723186.1| tRNA methyl transferase [Bacteroides ovatus SD CC 2a]
gi|292639186|gb|EFF57503.1| tRNA methyl transferase [Bacteroides ovatus SD CC 2a]
Length = 134
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL ++ + ++ D Q + EL R+ +
Sbjct: 1 MEERNKRVLVGMSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAERMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHI 76
+ + +K+++ ++ I
Sbjct: 59 YVADERIPFKETIVKNFI 76
>gi|260752516|ref|YP_003225409.1| argininosuccinate synthase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258551879|gb|ACV74825.1| argininosuccinate synthase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 408
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K +L +SGG D+S L W + + V T + D GQ ++E R ++
Sbjct: 1 MTEKVKRVVLAYSGGLDTSVILKWLQEHYGCEVVTFTADLGQGEELE-PARKKAEMMGIK 59
Query: 63 LMPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 PEHIFMDDLREEFVRD 75
>gi|90413208|ref|ZP_01221203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photobacterium profundum 3TCK]
gi|90325760|gb|EAS42218.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photobacterium profundum 3TCK]
Length = 371
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS L + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLLQQGYQVEGLFM----KNWEEDDNEEYCSAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|56551932|ref|YP_162771.1| argininosuccinate synthase [Zymomonas mobilis subsp. mobilis ZM4]
gi|61211393|sp|Q5NNQ0|ASSY_ZYMMO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|56543506|gb|AAV89660.1| Argininosuccinate synthase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 408
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K +L +SGG D+S L W + + V T + D GQ ++E R ++
Sbjct: 1 MTEKVKRVVLAYSGGLDTSVILKWLQEHYGCEVVTFTADLGQGEELE-PARKKAEMMGIK 59
Query: 63 LMPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 PEHIFMDDLREEFVRD 75
>gi|81615317|sp|Q6LT18|MNMA_PHOPR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|46912768|emb|CAG19558.1| putative (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photobacterium profundum SS9]
Length = 377
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS L + +VE L +N E + C +
Sbjct: 7 MSDNSQK--KVIVGMSGGVDSSVSAYLLLQQGYQVEGLFM----KNWEEDDNEEYCSAAE 60
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 61 DLADAQAVCDKLGIHLHTINFA 82
>gi|260062425|ref|YP_003195505.1| tRNA-specific 2-thiouridylase MnmA [Robiginitalea biformata
HTCC2501]
gi|88783988|gb|EAR15159.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Robiginitalea biformata HTCC2501]
Length = 399
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + V L
Sbjct: 1 MGTTRKVVVGLSGGVDSSVTALLLKQQGYEVIGL 34
>gi|294102033|ref|YP_003553891.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Aminobacterium colombiense DSM 12261]
gi|293617013|gb|ADE57167.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Aminobacterium colombiense DSM 12261]
Length = 352
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS+ + V + F
Sbjct: 1 MKKKVLVGMSGGLDSAVTSLLLKKQGYEVVGVFF 34
>gi|295690747|ref|YP_003594440.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caulobacter segnis ATCC 21756]
gi|295432650|gb|ADG11822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caulobacter segnis ATCC 21756]
Length = 409
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + V ++ Y + + C + I++ +
Sbjct: 39 RIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDARMAAE 98
Query: 69 DSLGEDHILP 78
++L
Sbjct: 99 RIGIPHYVLD 108
>gi|242309155|ref|ZP_04808310.1| tRNA methyltransferase [Helicobacter pullorum MIT 98-5489]
gi|239524196|gb|EEQ64062.1| tRNA methyltransferase [Helicobacter pullorum MIT 98-5489]
Length = 349
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
LLL SGG DSS C + V +
Sbjct: 2 KKVLLLMSGGVDSSYCAYLLQKQGYSVYGI 31
>gi|113208240|dbj|BAF03524.1| argininosuccinate synthetase [Porphyra yezoensis]
gi|115345228|dbj|BAF33293.1| argininosuccinate synthetase [Porphyra yezoensis]
Length = 438
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L +SGG D+S L W D+ V D GQ + E V+ + + +
Sbjct: 5 KVVLAYSGGLDTSVILKWLQDQGYEVICFIADVGQTDDFE---AARVKALSLGATKVYVE 61
Query: 70 SLGEDHILPLAI 81
+L ++ +
Sbjct: 62 NLRKEFVTDFIF 73
>gi|222100158|ref|YP_002534726.1| Argininosuccinate synthase [Thermotoga neapolitana DSM 4359]
gi|254807534|sp|B9K8S7|ASSY_THENN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|221572548|gb|ACM23360.1| Argininosuccinate synthase [Thermotoga neapolitana DSM 4359]
Length = 409
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+L +SGG D+S L W ++ V + GQ++ E ++
Sbjct: 1 MKEKVVLAYSGGLDTSVILKWLCEKGFEVIAYVANVGQKDDFEAIKEKALK 51
>gi|209809394|ref|YP_002264932.1| NAD synthetase [Aliivibrio salmonicida LFI1238]
gi|238059032|sp|B6ERM8|NADE_ALISL RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|208010956|emb|CAQ81361.1| NH(3)-dependent NAD(+) synthetase [Aliivibrio salmonicida LFI1238]
Length = 276
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 64/205 (31%), Gaps = 36/205 (17%)
Query: 2 NDIIKKAPSALLL-FSGGQDSSTC---LSWALDR--------FDRVETLSFDYG-QRNKV 48
+ + + +L+L SGG DS+TC A++ + + YG Q+++
Sbjct: 30 STLTQSGCKSLILGISGGVDSTTCGRLAQIAVNELNKESNSSDYQFIAVRLPYGIQKDED 89
Query: 49 ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
E + L K + KD + H L + ++ N V
Sbjct: 90 EAQLALEFIKPTHSISINIKDGVDGLHKANHLGLAHTGLLPTANDKIDFVKGN------V 143
Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
R A +A + V TD+S +
Sbjct: 144 KAR-------ARMIAQYEVAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACD 186
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + +A ++G + +
Sbjct: 187 LAPLFGLNKRQVRDVAAELGAPEQL 211
>gi|90577202|ref|ZP_01233013.1| galactosyl transferase [Vibrio angustum S14]
gi|90440288|gb|EAS65468.1| galactosyl transferase [Vibrio angustum S14]
Length = 562
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
A+ SGG DS ++ L R ++E ++F Y QR++ E+ + +
Sbjct: 238 AISTLSGGLDSRVIVTELLKRGIKLECMNFSY-QRSQDEVYAEVFAQ 283
>gi|331703443|ref|YP_004400130.1| tRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
[Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328801998|emb|CBW54152.1| tRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
[Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 384
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS L + VE L
Sbjct: 10 MKQKVVVGLSGGVDSSVACYLLLQQGYEVEGL 41
>gi|313665411|ref|YP_004047282.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma leachii PG50]
gi|312949863|gb|ADR24459.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma leachii PG50]
Length = 375
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS L + VE L
Sbjct: 1 MKQKVVVGLSGGVDSSVACYLLLQQGYEVEGL 32
>gi|300114360|ref|YP_003760935.1| hypothetical protein Nwat_1746 [Nitrosococcus watsonii C-113]
gi|299540297|gb|ADJ28614.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length = 581
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 23/124 (18%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
S G DS T L++ + +F GQ E+ + +++ +K
Sbjct: 243 LSAGLDSRTALAYLQRAGVEMSFYTF--GQPGSTEVIGAQSIAQRVGYSTHLFK------ 294
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+P A D + T +Q + +++ R ++ +VIG
Sbjct: 295 --IPDASWDDWEINIQTLGTIGPLQQSGWAHSW---RTML----------ANEADAVVIG 339
Query: 135 VCET 138
Sbjct: 340 YLGD 343
>gi|226479158|emb|CAX73074.1| putative GMP synthase [Schistosoma japonicum]
Length = 739
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG 43
A L+L SGG DS+ C + D ++ + D G
Sbjct: 212 ANKILILLSGGVDSTVCAALLSKTLDPSQIIAVHIDNG 249
>gi|256383871|gb|ACU78441.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma mycoides subsp. capri str. GM12]
gi|256384702|gb|ACU79271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma mycoides subsp. capri str. GM12]
gi|296455514|gb|ADH21749.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 375
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS L + VE L
Sbjct: 1 MKQKVVVGLSGGVDSSVACYLLLQQGYEVEGL 32
>gi|195055254|ref|XP_001994534.1| GH17302 [Drosophila grimshawi]
gi|193892297|gb|EDV91163.1| GH17302 [Drosophila grimshawi]
Length = 420
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMPKW 67
+L +SGG D+S L W L++ V + D GQ+ E + ++ E ++
Sbjct: 4 DKVILAYSGGLDTSCILKWLLEQRYEVICVLADVGQQENFEAARQKALKIGAKEVIVADI 63
Query: 68 KDSLGEDHILPLAILGDI 85
K + E +I P +G I
Sbjct: 64 KQNFVEQYIWPAIQMGLI 81
>gi|83319617|ref|YP_424495.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|123535669|sp|Q2SRW8|MNMA_MYCCT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|83283503|gb|ABC01435.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma capricolum subsp. capricolum ATCC 27343]
Length = 375
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS L + VE L
Sbjct: 1 MKQKVVVGLSGGVDSSVACYLLLQQGYEVEGL 32
>gi|222148504|ref|YP_002549461.1| NAD synthetase [Agrobacterium vitis S4]
gi|221735490|gb|ACM36453.1| NAD synthetase [Agrobacterium vitis S4]
Length = 559
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVEL---ECRLCVR 57
+ K +++L SGG DS+ C + A+D +RV T+ Y R E + C +
Sbjct: 287 VNKNGFKSVVLGLSGGIDSAICAAMAVDALGHERVRTIMLPY--RYTSEESFKDAADCAK 344
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
E + LA + + + S +T+
Sbjct: 345 ALGCHYDIVPISEPVEGFLASLADMFEGTESGITEE 380
>gi|161936317|ref|YP_129360.2| tRNA-specific 2-thiouridylase MnmA [Photobacterium profundum SS9]
Length = 371
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS L + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLLQQGYQVEGLFM----KNWEEDDNEEYCSAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|113474696|ref|YP_720757.1| argininosuccinate synthase [Trichodesmium erythraeum IMS101]
gi|119361343|sp|Q117P0|ASSY_TRIEI RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|110165744|gb|ABG50284.1| argininosuccinate synthase [Trichodesmium erythraeum IMS101]
Length = 400
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 33/197 (16%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +A +L +SGG D+S C+ + + + V TL+ D GQ +++E VRKK ++
Sbjct: 1 MSRATKVVLAYSGGVDTSVCIPYLKNEWGVKEVITLAADLGQGDELE-----GVRKKALD 55
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
E ++ + I + A + +N P R +I
Sbjct: 56 ------SGAVESLVIDVIE-PLIKEYAFPAIQANALYENRYPLATALARPLI-AKILVEA 107
Query: 123 AYRLGITNIVIGVCETDYSGYPDCR---HDTIRAIETAINLGMESHVTVHTPLMW--LKK 177
A + G I G C +D +R + AI + + + P + +
Sbjct: 108 AEKYGADAIAHG-----------CTGKGNDQVR-FDVAIA-ALNPQIKILAPAREWGMSR 154
Query: 178 YETWKLAQDIGGQDLVN 194
ET ++ G V
Sbjct: 155 EETIAYGEEYGIPAPVK 171
>gi|323692754|ref|ZP_08106982.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
symbiosum WAL-14673]
gi|323503196|gb|EGB19030.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
symbiosum WAL-14673]
Length = 392
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 62/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +E F + +K +
Sbjct: 176 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVTIEATYF-----HAPPYTSERAKQKVIDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ ++ + + I I + + + ++ + A
Sbjct: 231 KLVSRYSGPIKLHVVNFTDIQLYIYDKCPHEELTIIMRRY-------------MMKIAEE 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA + G ++ G + T+ ++ + + V P++ K E
Sbjct: 278 LAKKDGCLGLITGESIGQVAS------QTVHSLAVTNEVCT---LPVFRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++Q IG + E+
Sbjct: 329 DISQKIGTFETSIEPFEDC 347
>gi|296414926|ref|XP_002837146.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633000|emb|CAZ81337.1| unnamed protein product [Tuber melanosporum]
Length = 402
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 12/69 (17%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+ L +SGG D+S L+W +++ V D GQ + + E KI
Sbjct: 6 VCLAYSGGLDTSCILAWLIEKGYEVVCFMADIGQ--EEDFEAAKEKALKIGASSV----- 58
Query: 71 LGEDHILPL 79
H++ L
Sbjct: 59 ----HVVDL 63
>gi|283781959|ref|YP_003372714.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Pirellula staleyi DSM 6068]
gi|283440412|gb|ADB18854.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Pirellula staleyi DSM 6068]
Length = 373
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 39/143 (27%), Gaps = 22/143 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV------------- 56
+L SGG DSS + V + R+ E + V
Sbjct: 3 RIVLAMSGGVDSSVAAAILTRAGHEVIGVFM----RHGEEAQAACAVDAPGFQLPIFKER 58
Query: 57 --RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL---PNTFVPGR 111
K+ +D+ L + S + + I + + PN V
Sbjct: 59 SDHKQGCCSASDAEDARRVADRLDIPFYALNLQSEFRQIIDYFIDEYTVGRTPNPCVQCN 118
Query: 112 NIIFLVFAATLAYRLGITNIVIG 134
N + A +G + G
Sbjct: 119 NWLKFGKLFDYADSVGAEFVATG 141
>gi|83320221|gb|ABC02786.1| putative amidotransferase [Actinomadura melliaura]
Length = 602
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 13 LLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQ 44
++ SGG DSST + A+ + D V T S D+ Q
Sbjct: 261 VILSGGLDSSTLAALAMRQADAPVRTFSVDFRQ 293
>gi|157813148|gb|ABV81319.1| putative GMP synthetase [Speleonectes tulumensis]
Length = 197
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V + D G
Sbjct: 43 NNKVLMLVSGGVDSTVCAALLHKALKEDQVVAVHIDNG 80
>gi|153809107|ref|ZP_01961775.1| hypothetical protein BACCAC_03417 [Bacteroides caccae ATCC 43185]
gi|149128440|gb|EDM19659.1| hypothetical protein BACCAC_03417 [Bacteroides caccae ATCC 43185]
Length = 361
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRK 58
+ ++ L+ SGG DS+ TCL +R + ++ D Q + EL ++ +
Sbjct: 1 MKERNKRVLVGMSGGIDSTATCL-MLQERGYEIVGVTMRVWGDEPQDAR-ELAAQMGIEH 58
Query: 59 KIVELMPKWKDSLGEDHI 76
+ + +K+++ ++ I
Sbjct: 59 YVADERIPFKETIVKNFI 76
>gi|11499151|ref|NP_070385.1| hypothetical protein AF1556 [Archaeoglobus fulgidus DSM 4304]
gi|2649005|gb|AAB89691.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 274
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+N I++ L+ FSGG DSST + + V ++ + E+E + +++
Sbjct: 19 LNHFIQQFEKVLIAFSGGVDSSTLAAVCSNAGVEVLAVTVLSSVSPRREMEEAKRIAEEL 78
Query: 61 VELMPKWKDSLGED 74
K L ++
Sbjct: 79 GVRHEFLKIDLMDE 92
>gi|325860469|ref|ZP_08173580.1| hypothetical protein HMPREF9303_0833 [Prevotella denticola CRIS
18C-A]
gi|325481996|gb|EGC85018.1| hypothetical protein HMPREF9303_0833 [Prevotella denticola CRIS
18C-A]
Length = 430
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 80/253 (31%), Gaps = 56/253 (22%)
Query: 2 NDIIKKAPSAL-----LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
++++ K+ L + SGG DS + L + + +Y
Sbjct: 132 SNLMGKSKQTLAASDFCMLSGGLDSFIGATDLLTNGKKPIFVG-NYNG------------ 178
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
K + K + L + + S K +++ + R+++F
Sbjct: 179 GKGVSVYQNKVINLLSDHFGYDVNRFFQFYAS------PKKGKEDTTRS-----RSLMFF 227
Query: 117 VFAATLAYR-LGITNIVI---GVCETD--------YSGYPDCRHDTIRAIETAINLGMES 164
A LA + + + GV + S H ++ + +E
Sbjct: 228 SHAILLASGMVNPVTLYVPENGVISLNIPLTIHRSGSLSTRTTHPYFMSMLQQLLNNLEL 287
Query: 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTC-------YLGKRDKRYEWGYG 217
+T+ P + K E + D + + ++ + +C Y G+ + +
Sbjct: 288 PITIINPYQFKTKGEMVRDCLD---RTFLENNIQWTMSCSHPDLGRYSGETEPSH----- 339
Query: 218 CNSCPACYLRQKG 230
C C C +R+
Sbjct: 340 CGCCLPCTIRRAA 352
>gi|242280581|ref|YP_002992710.1| hypothetical protein Desal_3120 [Desulfovibrio salexigens DSM
2638]
gi|242123475|gb|ACS81171.1| conserved hypothetical protein [Desulfovibrio salexigens DSM
2638]
Length = 349
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ K AL LFSGG DS D+ +V L F
Sbjct: 1 MNKQYDALALFSGGLDSILACKVIQDQGLKVLGLHF 36
>gi|196249022|ref|ZP_03147721.1| ExsB family protein [Geobacillus sp. G11MC16]
gi|196211251|gb|EDY06011.1| ExsB family protein [Geobacillus sp. G11MC16]
Length = 274
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 12/75 (16%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
++K+ + L+ FSGG DS+ L+ A + D+V ++ + V
Sbjct: 14 HLLKEMGNVLVAFSGGVDSTFLLAMAKEALGDQVLAVT-----------AVSETFPAREV 62
Query: 62 ELMPKWKDSLGEDHI 76
+ K + +G HI
Sbjct: 63 QHATKLAEQIGVKHI 77
>gi|253568894|ref|ZP_04846304.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 1_1_6]
gi|251840913|gb|EES68994.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 1_1_6]
Length = 369
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 19/79 (24%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG----------QRNKVEL--- 50
+++ LL SGG DSS L+ V ++F Y R+ E
Sbjct: 1 MEENKRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTEYLEDARHLAERLGI 60
Query: 51 -----ECRLCVRKKIVELM 64
+ R RK+I+E
Sbjct: 61 RHITYDAREIFRKQIIEYF 79
>gi|225681916|gb|EEH20200.1| argininosuccinate synthase [Paracoccidioides brasiliensis Pb03]
Length = 266
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ L +SGG D+S L+W +++ V D GQ E R +
Sbjct: 1 MPAKEKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQAEDFEEAERKAL 52
>gi|121998009|ref|YP_001002796.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Halorhodospira halophila SL1]
gi|121589414|gb|ABM61994.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Halorhodospira halophila SL1]
Length = 354
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + P A+ L SGG DS D+ VE ++F
Sbjct: 1 MPEQPKAVALISGGLDSMLAARVVQDQGVHVEGINF 36
>gi|76802549|ref|YP_327557.1| NAD synthetase [Natronomonas pharaonis DSM 2160]
gi|76558414|emb|CAI50005.1| NAD(+) synthase (glutamine-hydrolyzing) 1 [Natronomonas pharaonis
DSM 2160]
Length = 275
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLS 39
A A+L SGG DS+T A+ DRV +S
Sbjct: 42 ADRAVLGLSGGIDSTTVAYLAVAALGPDRVHGIS 75
>gi|329117240|ref|ZP_08245957.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
parauberis NCFD 2020]
gi|326907645|gb|EGE54559.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
parauberis NCFD 2020]
Length = 404
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVEIEAVHF 209
>gi|283956079|ref|ZP_06373566.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
1336]
gi|283792399|gb|EFC31181.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
1336]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ +D +D++ P+ I ++
Sbjct: 61 ENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|222152884|ref|YP_002562061.1| thiamine biosynthesis protein ThiI [Streptococcus uberis 0140J]
gi|254784234|sp|B9DU51|THII_STRU0 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|222113697|emb|CAR41642.1| putative thiamine biosynthesis protein [Streptococcus uberis 0140J]
Length = 404
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVEIEAVHF 209
>gi|218462430|ref|ZP_03502521.1| argininosuccinate synthase protein [Rhizobium etli Kim 5]
Length = 337
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K +L +SGG D+S L W + + V T + D GQR ++E + +
Sbjct: 1 MARKIGKIVLAYSGGLDTSIILKWLQETYGCEVVTFTADLGQREELETARAKAKMLGVRD 60
Query: 63 L 63
+
Sbjct: 61 I 61
>gi|205355515|ref|ZP_03222286.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205346749|gb|EDZ33381.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ +D +D++ P+ I ++
Sbjct: 61 ENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|157414941|ref|YP_001482197.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
81116]
gi|172047098|sp|A8FL83|ASSY_CAMJ8 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|157385905|gb|ABV52220.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
81116]
gi|307747580|gb|ADN90850.1| Argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
M1]
gi|315931862|gb|EFV10817.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
327]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ +D +D++ P+ I ++
Sbjct: 61 ENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|157151681|ref|YP_001450114.1| thiamine biosynthesis protein ThiI [Streptococcus gordonii str.
Challis substr. CH1]
gi|189030661|sp|A8AWF4|THII_STRGC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|157076475|gb|ABV11158.1| thiamine biosynthesis protein ThiI [Streptococcus gordonii str.
Challis substr. CH1]
Length = 404
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 63/192 (32%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS AL R +E + F KK +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K + L T R + + G
Sbjct: 233 FGGNIQFIEVPF------TDIQEEIKAKAPEAYLMTLT----R-RFMMRITDRIREERGA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + TI +++ AIN + V P++ + K E ++A+ I
Sbjct: 282 QVIINGESLGQVAS------QTIESMQ-AINAVTNTP--VIRPVVTMDKLEIIEIAEKID 332
Query: 189 GQDLVNLILEES 200
+ E+
Sbjct: 333 TFQISIQPFEDC 344
>gi|153812693|ref|ZP_01965361.1| hypothetical protein RUMOBE_03100 [Ruminococcus obeum ATCC 29174]
gi|149831209|gb|EDM86298.1| hypothetical protein RUMOBE_03100 [Ruminococcus obeum ATCC 29174]
Length = 393
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 62/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
I A+LL SGG DS R ++E + F + +K +
Sbjct: 176 PIGTNGKAMLLLSGGIDSPVAGYMIAKRGVKIEAVYF-----HAPPYTSERAKQKVVDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ ++ + + I I + + + ++ + A
Sbjct: 231 KLVARYSGPIRLHVVNFTDIQLYIYDQCPHEELTIIMRRY-------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + ++ G + + +++ + V+ P++ K E
Sbjct: 278 FARKDKCLGLITGESIGQVAS---------QTLQSLAATDEVCELPVYRPVIGFDKEEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ I + E+
Sbjct: 329 QISRKINTFETSIQPFEDC 347
>gi|148926641|ref|ZP_01810322.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845160|gb|EDK22255.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ +D +D++ P+ I ++
Sbjct: 61 ENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|139438964|ref|ZP_01772424.1| Hypothetical protein COLAER_01430 [Collinsella aerofaciens ATCC
25986]
gi|133775675|gb|EBA39495.1| Hypothetical protein COLAER_01430 [Collinsella aerofaciens ATCC
25986]
Length = 366
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 36/131 (27%), Gaps = 11/131 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DSS + + V + I +
Sbjct: 3 NKRVLVAMSGGVDSSVTAYLLKSQGYECVGATMRLTCPAPDPTTGMSKVDRDIADAKAVA 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLA 123
+ H+L L D + N Q+ PN P R+I F A
Sbjct: 63 ERLGIPHHVLDLQQTFDRNVIERFVNA---YQEGLTPN---PCIICNRHIKFGALLDA-A 115
Query: 124 YRLGITNIVIG 134
+G I G
Sbjct: 116 LDMGCDYIATG 126
>gi|153952360|ref|YP_001398379.1| argininosuccinate synthase [Campylobacter jejuni subsp. doylei
269.97]
gi|166219958|sp|A7H4E9|ASSY_CAMJD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|152939806|gb|ABS44547.1| argininosuccinate synthase [Campylobacter jejuni subsp. doylei
269.97]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ +D +D++ P+ I ++
Sbjct: 61 ENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|85057877|ref|YP_456793.1| tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferase
[Aster yellows witches'-broom phytoplasma AYWB]
gi|123518066|sp|Q2NIM9|MNMA_AYWBP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|84789982|gb|ABC65714.1| tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferase
[Aster yellows witches'-broom phytoplasma AYWB]
Length = 378
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + VE +
Sbjct: 3 KVVVGLSGGVDSAVAAFLLKKQGYLVEAV 31
>gi|57236975|ref|YP_178776.1| argininosuccinate synthase [Campylobacter jejuni RM1221]
gi|61211373|sp|Q5HVA9|ASSY_CAMJR RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|57165779|gb|AAW34558.1| argininosuccinate synthase [Campylobacter jejuni RM1221]
gi|315058080|gb|ADT72409.1| Argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
S3]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ +D +D++ P+ I ++
Sbjct: 61 ENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|39938611|ref|NP_950377.1| tRNA-specific 2-thiouridylase MnmA [Onion yellows phytoplasma
OY-M]
gi|81565131|sp|Q6YR90|MNMA_ONYPE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|39721720|dbj|BAD04210.1| tRNA(5-methylaminomethyl-2-thiouridylate) [Onion yellows
phytoplasma OY-M]
Length = 378
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + VE +
Sbjct: 3 KVVVGLSGGVDSAVAAFLLKKQGYLVEAV 31
>gi|88597140|ref|ZP_01100376.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
84-25]
gi|88190829|gb|EAQ94802.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
84-25]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ +D +D++ P+ I ++
Sbjct: 61 ENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|86151608|ref|ZP_01069822.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
260.94]
gi|86153213|ref|ZP_01071417.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613552|ref|YP_001000365.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005311|ref|ZP_02271069.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
81-176]
gi|315124174|ref|YP_004066178.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|166219959|sp|A1VZ24|ASSY_CAMJJ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|85841237|gb|EAQ58485.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85842939|gb|EAQ60150.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249480|gb|EAQ72440.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
81-176]
gi|284925923|gb|ADC28275.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315017896|gb|ADT65989.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ +D +D++ P+ I ++
Sbjct: 61 ENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|68171265|ref|ZP_00544667.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia chaffeensis str. Sapulpa]
gi|88657652|ref|YP_507667.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia chaffeensis str. Arkansas]
gi|123492948|sp|Q2GFW6|MNMA_EHRCR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|67999312|gb|EAM85959.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia chaffeensis str. Sapulpa]
gi|88599109|gb|ABD44578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia chaffeensis str. Arkansas]
Length = 367
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 18/188 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRL---CVRKKIVE 62
A +A++ SGG DSS + +V ++ Y C K++
Sbjct: 17 SATTAVVAMSGGVDSSVAAALLHKLGYKVIGITLQLYNNTTGKGACCGSLDTQDAKQVAS 76
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+M +L + + ++ D + + + N V R+++
Sbjct: 77 IMGFPHYTLNYEKVFKEEVIDDFIDTYMQGKTPIPCIKCNQ---VVKFRDLLNAT----- 128
Query: 123 AYRLGITNIVIGV----CETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKK 177
L +V G E D Y DT + + + + PL K
Sbjct: 129 -KSLDADILVTGHYIRKIEQDDDIYVYSSKDTKKDQSYFLFATTIEQLKFLRFPLGNFHK 187
Query: 178 YETWKLAQ 185
KLA+
Sbjct: 188 DNIRKLAE 195
>gi|86149847|ref|ZP_01068076.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|218562310|ref|YP_002344089.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|30172970|sp|Q9PHK7|ASSY_CAMJE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|85839665|gb|EAQ56925.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|112360016|emb|CAL34806.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|315926782|gb|EFV06156.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929329|gb|EFV08537.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
305]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ +D +D++ P+ I ++
Sbjct: 61 ENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|313206777|ref|YP_004045954.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Riemerella anatipestifer DSM 15868]
gi|312446093|gb|ADQ82448.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Riemerella anatipestifer DSM 15868]
gi|315023849|gb|EFT36851.1| tRNA-specific 2-thiouridylase MnmA [Riemerella anatipestifer RA-YM]
gi|325335784|gb|ADZ12058.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Riemerella anatipestifer RA-GD]
Length = 395
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 11/129 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS + V L V LE + + + +
Sbjct: 2 KVVVGLSGGVDSSVAAYLLQQQGHEVIGLFMRNWNDASVTLEDECPWIEDSNDALLVAQK 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNI---IFLVFAATLAYR 125
++ ++ ++ + + + + PN V R + +F+ A +
Sbjct: 62 LGIPFQVIDMS---ELYKERIVDYMFEEYEKGRTPNPDVLCNREVKFDVFMKTALS---- 114
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 115 LGADKVATG 123
>gi|261415477|ref|YP_003249160.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|261371933|gb|ACX74678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fibrobacter succinogenes subsp. succinogenes S85]
Length = 366
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 13/35 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + + SGG DS+ + V ++
Sbjct: 1 MSQKKRVAVGLSGGVDSALSAYLLKKQGYEVVGMT 35
>gi|189465036|ref|ZP_03013821.1| hypothetical protein BACINT_01380 [Bacteroides intestinalis DSM
17393]
gi|189437310|gb|EDV06295.1| hypothetical protein BACINT_01380 [Bacteroides intestinalis DSM
17393]
Length = 350
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 8/75 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-------LECRLCV 56
+K LL SGG DSS + V ++F Y E L RL +
Sbjct: 1 MKSKKRVLLGMSGGTDSSVAAMLLQEAGYEVTGVTFRFYDSEGFEESLDDARTLASRLNI 60
Query: 57 RKKIVELMPKWKDSL 71
I + +++ +
Sbjct: 61 PHIIYDARELFRERI 75
>gi|283953972|ref|ZP_06371501.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
414]
gi|283794577|gb|EFC33317.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
414]
Length = 406
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
M + IKK +L +SGG D+S L W D + V T + D GQ ++E + +
Sbjct: 1 MENEIKK---VVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLG 57
Query: 60 IVE---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
I E + +D +D++ P+ I ++
Sbjct: 58 IKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|319779294|ref|YP_004130207.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Taylorella equigenitalis MCE9]
gi|317109318|gb|ADU92064.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Taylorella equigenitalis MCE9]
Length = 371
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
P ++ SGG DSS ++ V +
Sbjct: 3 KPKVVVGLSGGVDSSVSAYLLKEQGYDVLGV 33
>gi|197104258|ref|YP_002129635.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Phenylobacterium zucineum HLK1]
gi|196477678|gb|ACG77206.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Phenylobacterium zucineum HLK1]
Length = 371
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + V ++ Y V+ + C + I + +
Sbjct: 8 RIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAVQKKGACCAGQDIHDARTAAE 67
Query: 69 DSLGEDHILP 78
++L
Sbjct: 68 GIGIPHYVLD 77
>gi|95929128|ref|ZP_01311873.1| thiamine biosynthesis protein [Desulfuromonas acetoxidans DSM
684]
gi|95135029|gb|EAT16683.1| thiamine biosynthesis protein [Desulfuromonas acetoxidans DSM
684]
Length = 324
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL +FSGG DS + V L F
Sbjct: 3 KALGIFSGGLDSILAALLLRKQGVDVHCLCF 33
>gi|295109584|emb|CBL23537.1| thiazole biosynthesis/tRNA modification protein ThiI [Ruminococcus
obeum A2-162]
Length = 393
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 62/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
I A+LL SGG DS R ++E + F + +K +
Sbjct: 176 PIGTNGKAMLLLSGGIDSPVAGYMIAKRGVKIEAVYF-----HAPPYTSERAKQKVVDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ ++ + + I I + + + ++ + A
Sbjct: 231 KLVARYSGPIRLHVVNFTDIQLYIYDQCPHEELTIIMRRY-------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + ++ G + + +++ + V+ P++ K E
Sbjct: 278 FARKDKCLGLITGESIGQVAS---------QTLQSLAATDEVCELPVYRPVIGFDKEEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ I + E+
Sbjct: 329 QISRKINTFETSIQPFEDC 347
>gi|289192120|ref|YP_003458061.1| Queuosine synthesis-like protein [Methanocaldococcus sp.
FS406-22]
gi|288938570|gb|ADC69325.1| Queuosine synthesis-like protein [Methanocaldococcus sp.
FS406-22]
Length = 260
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
I K PSA++ FSGG DSST A V+ +S
Sbjct: 59 IDKKPSAVVAFSGGVDSSTSTIIAK-HIFNVKAVS 92
>gi|76155514|gb|AAX26805.2| SJCHGC05120 protein [Schistosoma japonicum]
Length = 200
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG 43
A L+L SGG DS+ C + D ++ + D G
Sbjct: 118 ANKILILLSGGVDSTVCAALLSKTLDPSQIIAVHIDNG 155
>gi|268679656|ref|YP_003304087.1| argininosuccinate synthase [Sulfurospirillum deleyianum DSM 6946]
gi|268617687|gb|ACZ12052.1| argininosuccinate synthase [Sulfurospirillum deleyianum DSM 6946]
Length = 409
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+KK ++L +SGG D+S L W D + V T + D GQ ++E + + I
Sbjct: 1 MKKNVKKVVLAYSGGLDTSIILKWLQDEYQCEVVTFTADIGQGEELEPARKKALSLGIKP 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ K+ D++ P+ I ++
Sbjct: 61 ENIFIEDLKEEFVRDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|261409619|ref|YP_003245860.1| argininosuccinate synthase [Paenibacillus sp. Y412MC10]
gi|261286082|gb|ACX68053.1| argininosuccinate synthase [Paenibacillus sp. Y412MC10]
Length = 410
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVELMP 65
+L +SGG D+S L W + +D + + D GQ+ +++ LE + +
Sbjct: 3 KQKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVYID 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+D D I P+ G + ++
Sbjct: 63 DLRDEFANDFIFPMFQAGAMYEGQYLLGTSIA 94
>gi|163787436|ref|ZP_02181883.1| argininosuccinate synthetase [Flavobacteriales bacterium ALC-1]
gi|159877324|gb|EDP71381.1| argininosuccinate synthetase [Flavobacteriales bacterium ALC-1]
Length = 394
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ +SGG D+S C + +S + G + E++ K+ K
Sbjct: 2 KKLVIAYSGGLDTSYCAVSLSKAGYDIHAVSVNTGGFTQEEIKTIESNAYKMGVSTYKNI 61
Query: 69 DSLGE--DHILPLAILGDISHS 88
D++ D ++ I G++ +
Sbjct: 62 DAIASYYDKVIKYLIFGNVLKN 83
>gi|329928698|ref|ZP_08282547.1| argininosuccinate synthase [Paenibacillus sp. HGF5]
gi|328937479|gb|EGG33897.1| argininosuccinate synthase [Paenibacillus sp. HGF5]
Length = 410
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVELMP 65
+L +SGG D+S L W + +D + + D GQ+ +++ LE + +
Sbjct: 3 KQKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVYID 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+D D I P+ G + ++
Sbjct: 63 DLRDEFANDFIFPMFQAGAMYEGQYLLGTSIA 94
>gi|315924503|ref|ZP_07920724.1| argininosuccinate synthase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622207|gb|EFV02167.1| argininosuccinate synthase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 410
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
+ + +L +SGG D++T + W + + V + D GQ
Sbjct: 1 MSENKKVILAYSGGLDTTTIVPWLKETYNYDVICVCVDVGQ 41
>gi|310644302|ref|YP_003949061.1| argininosuccinate synthase [Paenibacillus polymyxa SC2]
gi|309249253|gb|ADO58820.1| Argininosuccinate synthase [Paenibacillus polymyxa SC2]
Length = 411
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVELMP 65
+L +SGG D+S L W + +D + + D GQ+ +++ LE + +
Sbjct: 3 KEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVYID 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+D +D I P+ G + ++
Sbjct: 63 DLRDEFAKDFIYPMFQAGALYEGQYLLGTSIA 94
>gi|308751119|gb|ADO44602.1| argininosuccinate synthase [Hydrogenobacter thermophilus TK-6]
Length = 401
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVE 62
+ +L +SGG D+S + W ++ V T + D GQ + E + + IVE
Sbjct: 4 MSKRVILAYSGGLDTSVMVRWLTEKGYEVITYTADVGQGEELSHIPEKARQAGAVEAIVE 63
Query: 63 LMPKWKDS 70
+ +
Sbjct: 64 DLKEEFAR 71
>gi|308071071|ref|YP_003872676.1| argininosuccinate synthase (Citrulline--aspartate ligase)
[Paenibacillus polymyxa E681]
gi|305860350|gb|ADM72138.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
[Paenibacillus polymyxa E681]
Length = 411
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVELMP 65
+L +SGG D+S L W + +D + + D GQ+ +++ LE + +
Sbjct: 3 KEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVYID 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+D +D I P+ G + ++
Sbjct: 63 DLRDEFAKDFIYPMFQAGALYEGQYLLGTSIA 94
>gi|288817514|ref|YP_003431861.1| argininosuccinate synthase [Hydrogenobacter thermophilus TK-6]
gi|288786913|dbj|BAI68660.1| argininosuccinate synthase [Hydrogenobacter thermophilus TK-6]
Length = 398
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVE 62
+ +L +SGG D+S + W ++ V T + D GQ + E + + IVE
Sbjct: 1 MSKRVILAYSGGLDTSVMVRWLTEKGYEVITYTADVGQGEELSHIPEKARQAGAVEAIVE 60
Query: 63 LMPKWKDS 70
+ +
Sbjct: 61 DLKEEFAR 68
>gi|255320379|ref|ZP_05361563.1| argininosuccinate synthase [Acinetobacter radioresistens SK82]
gi|262379339|ref|ZP_06072495.1| argininosuccinate synthase [Acinetobacter radioresistens SH164]
gi|255302574|gb|EET81807.1| argininosuccinate synthase [Acinetobacter radioresistens SK82]
gi|262298796|gb|EEY86709.1| argininosuccinate synthase [Acinetobacter radioresistens SH164]
Length = 447
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + + + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAENYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGMP 101
>gi|254448672|ref|ZP_05062130.1| argininosuccinate synthase [gamma proteobacterium HTCC5015]
gi|198261680|gb|EDY85967.1| argininosuccinate synthase [gamma proteobacterium HTCC5015]
Length = 403
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S W D + V T + D GQ ++E I E+
Sbjct: 1 MSDVKKVVLAYSGGLDTSIIAKWLQDTYQCEVVTFTADLGQGEEIEPARAKAQAMGIQEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIEDLREEFVRDFVFPMFRANAIYEGEYLLGTSIA 95
>gi|89902516|ref|YP_524987.1| tRNA-specific 2-thiouridylase MnmA [Rhodoferax ferrireducens
T118]
gi|122478272|sp|Q21RZ7|MNMA_RHOFD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|89347253|gb|ABD71456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodoferax ferrireducens T118]
Length = 384
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN ++ SGG DS+ + V +
Sbjct: 1 MNK-RHSGQRVVVGLSGGVDSAVTAWLLKQQGYEVIGI 37
>gi|147669349|ref|YP_001214167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalococcoides sp. BAV1]
gi|146270297|gb|ABQ17289.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalococcoides sp. BAV1]
Length = 361
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 14/88 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-------YGQ-------RN 46
+ ++ + ++ SGG DSS L++ V +S YG
Sbjct: 2 VAEMSDSSELVMVAMSGGVDSSVTAMLLLEQGYNVAGVSLQLKSNNEPYGNGYNLKLINR 61
Query: 47 KVELECRLCVRKKIVELMPKWKDSLGED 74
E+ L + +V+L + + D
Sbjct: 62 AREVAAALNIPHYVVDLSDIFSQRVIAD 89
>gi|159905179|ref|YP_001548841.1| hypothetical protein MmarC6_0792 [Methanococcus maripaludis C6]
gi|159886672|gb|ABX01609.1| ExsB family protein [Methanococcus maripaludis C6]
Length = 195
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMP 65
+A +LFSGG+DSS + ++ ++ ++G R+ E + K+ +
Sbjct: 2 NAHVLFSGGKDSSLSAIILHNLGYEIQLVTVNFGVLDSYRHAEETAKIIGYPHKVESIDK 61
Query: 66 KWKDS 70
+ +
Sbjct: 62 ELIEK 66
>gi|148980425|ref|ZP_01816047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrionales bacterium SWAT-3]
gi|145961228|gb|EDK26541.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrionales bacterium SWAT-3]
Length = 378
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 1 MNDII--KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVR 57
M+DI ++ SGG DSS + +VE L +N E + C
Sbjct: 1 MSDISSGNSEKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNEEYCTA 56
Query: 58 KKIVELMPKWKDSLGED-HILPLA 80
+ + D LG H + A
Sbjct: 57 AEDLADAQAVCDKLGIHLHTINFA 80
>gi|134046845|ref|YP_001098330.1| ExsB family protein [Methanococcus maripaludis C5]
gi|132664470|gb|ABO36116.1| ExsB family protein [Methanococcus maripaludis C5]
Length = 261
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
++ K A++ FSGG DS T A + + ++
Sbjct: 57 SNQNLKKEKAVVAFSGGVDS-TASIIAGKKIFEICAVTVR 95
>gi|15643345|ref|NP_228389.1| hypothetical protein TM0579 [Thermotoga maritima MSB8]
gi|8928511|sp|Q9WZ48|TILS_THEMA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|4981097|gb|AAD35664.1|AE001733_1 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 414
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 27/140 (19%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKK 59
++++ L+ SGG DS T L ++ D +++ R R+
Sbjct: 1 MLEEGEHVLVAVSGGIDSMTLLYVLRKFSPLLKIKITAAHLD----HRIRESSRRD-REF 55
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + +W + + ++ D + + +A +++ + L T
Sbjct: 56 VERICRQWNIPVETSEVDVPSLWKDSGKT--LEEIAREVRYDFLKRT------------- 100
Query: 120 ATLAYRLGITNIVIGVCETD 139
A ++G + I + + D
Sbjct: 101 ---AKKVGASKIALAHHKND 117
>gi|86147101|ref|ZP_01065418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. MED222]
gi|218710012|ref|YP_002417633.1| tRNA-specific 2-thiouridylase MnmA [Vibrio splendidus LGP32]
gi|85835166|gb|EAQ53307.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. MED222]
gi|218323031|emb|CAV19208.1| Probable tRNA(5-methylaminomethyl-2-thiouridylate)-
methyltransferase [Vibrio splendidus LGP32]
Length = 378
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 1 MNDII--KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVR 57
M+DI ++ SGG DSS + +VE L +N E + C
Sbjct: 1 MSDISSGNSEKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNEEYCTA 56
Query: 58 KKIVELMPKWKDSLGED-HILPLA 80
+ + D LG H + A
Sbjct: 57 AEDLADAQAVCDKLGIHLHTINFA 80
>gi|84391736|ref|ZP_00991638.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio splendidus 12B01]
gi|84376449|gb|EAP93328.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio splendidus 12B01]
Length = 378
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 1 MNDII--KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVR 57
M+DI ++ SGG DSS + +VE L +N E + C
Sbjct: 1 MSDISSGNSEKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNEEYCTA 56
Query: 58 KKIVELMPKWKDSLGED-HILPLA 80
+ + D LG H + A
Sbjct: 57 AEDLADAQAVCDKLGIHLHTINFA 80
>gi|32473865|ref|NP_866859.1| ATP-utilizing enzyme [Rhodopirellula baltica SH 1]
gi|32444401|emb|CAD74400.1| conserved hypothetical protein-putative ATP-utilizing enzyme
[Rhodopirellula baltica SH 1]
Length = 316
Score = 40.2 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 47/164 (28%), Gaps = 37/164 (22%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ FSGG DSS + A V ++ V + ++ + + +
Sbjct: 32 VVAFSGGVDSSVVAAAAHRTGRDVVAVT-----------AQSPAVARWQLDWARRVAEQV 80
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
G H D S + L FL +A + G T I
Sbjct: 81 GITHQFVSTDESDRSSYRRNHSDRCFYCKQTLYE---------FLT---PIAEQRGAT-I 127
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
V G D D R + + V TPL L
Sbjct: 128 VSGTNADDLG---DHRP----------GITAGTQARVQTPLADL 158
>gi|331091036|ref|ZP_08339878.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405258|gb|EGG84794.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
2_1_46FAA]
Length = 360
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ SGG DSS ++ V ++
Sbjct: 2 EKKKVVVGMSGGVDSSVAAHLLKEQGYDVIGVT 34
>gi|261868090|ref|YP_003256012.1| thiamine biosynthesis protein ThiI [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413422|gb|ACX82793.1| thiamine biosynthesis/tRNA modification protein ThiI
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 485
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS L R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG------AAHEIGVKQMA-- 224
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W+ + +AI + + +NV V R + + A+ +A
Sbjct: 225 YHIWQRYGSSHKVRFVAINFEGVVGEILENVDNGQMG------VVLKR--MMVRAASKIA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + + V PL+ K + +
Sbjct: 277 QRFDIQAIVTGEALGQVSS---------QTLTNLRLIDEAAEGLVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A+ IG D+
Sbjct: 328 AKHIGTDDI 336
>gi|254169064|ref|ZP_04875902.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
gi|197622034|gb|EDY34611.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
Length = 221
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
A+ LFSGG+DS+ + A+ + +E L Y +R
Sbjct: 2 RAIALFSGGKDSTYSIYLAMQQGFEIEKLVTIYPKR 37
>gi|168218238|ref|ZP_02643863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens NCTC 8239]
gi|182379744|gb|EDT77223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens NCTC 8239]
Length = 359
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 3 KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVT 34
>gi|157124722|ref|XP_001654171.1| gmp synthase [Aedes aegypti]
gi|108882800|gb|EAT47025.1| gmp synthase [Aedes aegypti]
Length = 684
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 62/209 (29%), Gaps = 38/209 (18%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG-QRNKVELECRLCVRKKIVELM 64
LLL SGG DS+ C + ++V + D G R +R+ V+LM
Sbjct: 230 NSKVLLLVSGGVDSTVCAALLRTALKPEQVIAVHIDNGFMRKNESATVEKSLRELGVDLM 289
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
K + + G + + + + + + + + FV N I
Sbjct: 290 MKDALYQFTRGTTTIKVPGSLYNQDTPMLCQTTSPEDKRKIIGDVFVKVSNEIIKDL--- 346
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE-----------------TAINLGMES 164
L + + R D I + I E+
Sbjct: 347 ---NLNADEVFLAQGTL--------RPDLIESASTLVSTKADTIKTHHNDTELIRQLRET 395
Query: 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
+ PL K E +L ++G V
Sbjct: 396 GRVIE-PLQDFHKDEVRQLGYELGLPAHV 423
>gi|312137424|ref|YP_004004761.1| argininosuccinate synthase [Methanothermus fervidus DSM 2088]
gi|311225143|gb|ADP77999.1| argininosuccinate synthase [Methanothermus fervidus DSM 2088]
Length = 390
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 63/196 (32%), Gaps = 56/196 (28%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+L FSGG D++ C+ ++++ V T D GQ +K +++ + KK K
Sbjct: 3 KAVLAFSGGLDTTVCIKLLEEKYNMNVITACVDVGQ-DKEDIKQAETIAKK---YSYKHY 58
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT------- 121
+D + + I +++ + L A
Sbjct: 59 TIDAKDEFVEEYVYRAIKANAIYEGYP--------------------LSTALARPLIAKK 98
Query: 122 ---LAYRLGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL-- 172
+A + I G C E+ I + + P+
Sbjct: 99 VVEIAEKEKADVIAHG-----------CTGKGNDQF--RFESTIRAISD--CKIVAPIRD 143
Query: 173 MWLKKYETWKLAQDIG 188
+ L + E K A++ G
Sbjct: 144 LNLTREEEIKYAKEHG 159
>gi|283853918|ref|ZP_06371128.1| thiamine biosynthesis protein [Desulfovibrio sp. FW1012B]
gi|283570695|gb|EFC18745.1| thiamine biosynthesis protein [Desulfovibrio sp. FW1012B]
Length = 353
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
K+ AL LFSGG DS + V L F
Sbjct: 2 KSYHALALFSGGLDSILAAKTVAAQGLDVLCLHF 35
>gi|190345978|gb|EDK37960.2| hypothetical protein PGUG_02058 [Meyerozyma guilliermondii ATCC
6260]
Length = 471
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 13/72 (18%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-------TLSFDYGQRNKVELECRLCV 56
+K + SGG DS CL++ L ++ +V +++ D+G R+ E+E
Sbjct: 19 TVKAPRRLAIALSGGVDSM-CLAYLLSQYKQVYEPSLELHSITIDHGYRSDSEIE----- 72
Query: 57 RKKIVELMPKWK 68
+K+ +++ W
Sbjct: 73 AQKVAQVVQNWG 84
>gi|182625650|ref|ZP_02953419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens D str. JGS1721]
gi|177909052|gb|EDT71527.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens D str. JGS1721]
Length = 359
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 3 KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVT 34
>gi|146420868|ref|XP_001486387.1| hypothetical protein PGUG_02058 [Meyerozyma guilliermondii ATCC
6260]
Length = 471
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 13/72 (18%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-------TLSFDYGQRNKVELECRLCV 56
+K + SGG DS CL++ L ++ +V +++ D+G R+ E+E
Sbjct: 19 TVKAPRRLAIALSGGVDSM-CLAYLLSQYKQVYEPSLELHSITIDHGYRSDSEIE----- 72
Query: 57 RKKIVELMPKWK 68
+K+ +++ W
Sbjct: 73 AQKVAQVVQNWG 84
>gi|110802009|ref|YP_699068.1| tRNA-specific 2-thiouridylase MnmA [Clostridium perfringens
SM101]
gi|123047295|sp|Q0SS39|MNMA_CLOPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|110682510|gb|ABG85880.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens SM101]
Length = 359
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 3 KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVT 34
>gi|110801338|ref|YP_696468.1| tRNA-specific 2-thiouridylase MnmA [Clostridium perfringens ATCC
13124]
gi|168211408|ref|ZP_02637033.1| tRNA -methyltransferase [Clostridium perfringens B str. ATCC
3626]
gi|24638315|sp|Q8XJH3|MNMA_CLOPE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|123049729|sp|Q0TPH2|MNMA_CLOP1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|110675985|gb|ABG84972.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens ATCC 13124]
gi|170710614|gb|EDT22796.1| tRNA -methyltransferase [Clostridium perfringens B str. ATCC
3626]
Length = 359
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 3 KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVT 34
>gi|323494360|ref|ZP_08099472.1| NAD synthetase [Vibrio brasiliensis LMG 20546]
gi|323311523|gb|EGA64675.1| NAD synthetase [Vibrio brasiliensis LMG 20546]
Length = 275
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 35/200 (17%)
Query: 6 KKAPSALLL-FSGGQDSSTC---LSWALDR-------FDRVETLSFDYG-QRNKVELECR 53
+L+L SGG DS+TC A+D+ + + YG Q+++ E +
Sbjct: 34 NSGCKSLVLGISGGVDSTTCGRLAQLAVDQLNEESNGGYQFIAVRLPYGEQKDEDEAQLA 93
Query: 54 LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
L + + K + H + S + + + + + FV G N+
Sbjct: 94 LQFIQPTHSVSVNIKAGVDGLH----------AASHIALDGTGLLPEESAKIDFVKG-NV 142
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
A +A + V TD+S + PL
Sbjct: 143 K--ARARMIAQYEIAGYVGGLVIGTDHSA--ENITGFYTKF--------GDGACDMAPLF 190
Query: 174 WLKKYETWKLAQDIGGQDLV 193
L K + ++A +G +L+
Sbjct: 191 GLSKRQVREIAATLGAPELL 210
>gi|260596791|ref|YP_003209362.1| tRNA s(4)U8 sulfurtransferase [Cronobacter turicensis z3032]
gi|260215968|emb|CBA28599.1| Thiamine biosynthesis protein thiI [Cronobacter turicensis z3032]
Length = 482
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWSRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S V PL+ K
Sbjct: 275 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLVLRPLISYDKEHII 325
Query: 182 KLAQDIGGQDLVNL 195
+A+ IG +D
Sbjct: 326 DIARKIGTEDFART 339
>gi|156935028|ref|YP_001438944.1| thiamine biosynthesis protein ThiI [Cronobacter sakazakii ATCC
BAA-894]
gi|156533282|gb|ABU78108.1| hypothetical protein ESA_02879 [Cronobacter sakazakii ATCC BAA-894]
Length = 537
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DS + R RV F+ G +I
Sbjct: 228 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 276
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ G H + I+ + + K+ D + V R + + A+
Sbjct: 277 QVAHYLWSRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 329
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S V PL+ K
Sbjct: 330 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLVLRPLISYDKEHII 380
Query: 182 KLAQDIGGQDLVNL 195
+A+ IG +D
Sbjct: 381 DIARKIGTEDFART 394
>gi|42560982|ref|NP_975433.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|81400641|sp|Q6MTG1|MNMA_MYCMS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|42492479|emb|CAE77075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma mycoides subsp. mycoides SC str. PG1]
gi|301320545|gb|ADK69188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 375
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS L++ VE L
Sbjct: 1 MKQKVIVGLSGGVDSSVACYLLLEQGYEVEGL 32
>gi|169839707|ref|ZP_02872895.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[candidate division TM7 single-cell isolate TM7a]
Length = 42
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++K +L SGG DSS ++ V +
Sbjct: 1 MEKRKRVVLGMSGGVDSSVAAILLKEQGYDVIGV 34
>gi|168214260|ref|ZP_02639885.1| tRNA -methyltransferase [Clostridium perfringens CPE str. F4969]
gi|170714272|gb|EDT26454.1| tRNA -methyltransferase [Clostridium perfringens CPE str. F4969]
Length = 359
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 3 KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVT 34
>gi|149247160|ref|XP_001528005.1| argininosuccinate synthase [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447959|gb|EDK42347.1| argininosuccinate synthase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 422
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 12 LLLFS--GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
++L S GG D+S +W +++ V + GQ E + +
Sbjct: 11 IVLLSYSGGLDTSVIAAWLIEQDYEVIAFLANIGQEEDFEKAEKKALA 58
>gi|32266697|ref|NP_860729.1| hypothetical protein HH1198 [Helicobacter hepaticus ATCC 51449]
gi|32262748|gb|AAP77795.1| conserved hypothetical protein [Helicobacter hepaticus ATCC
51449]
Length = 348
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + D+ V L F+ G
Sbjct: 3 ALALFSGGCDSLISMKLLKDQGIDVIALHFNIG 35
>gi|45359153|ref|NP_988710.1| ExsB family protein [Methanococcus maripaludis S2]
gi|45048028|emb|CAF31146.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 261
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 37/133 (27%), Gaps = 22/133 (16%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ K A++ FSGG DS+T + A + + ++ + K
Sbjct: 57 TNQNLKKEKAVVAFSGGVDSTTSIIVA-NNIFEICAVTVR---------SKYIMDAKTEQ 106
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + + + + K + +
Sbjct: 107 SILELTNSLNISHEFIDVNLNPIFEDTKSGKYHPCGRCHSTVEAEI------------LN 154
Query: 122 LAYRLGITNIVIG 134
A + GI I+ G
Sbjct: 155 YAEKNGIKYIIYG 167
>gi|304439506|ref|ZP_07399414.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372014|gb|EFM25612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 355
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETL 38
+ ++L SGG DSS ++ V +
Sbjct: 1 MTDKKRTVVLGISGGVDSSVAAYLLKEQGYNVIGV 35
>gi|302877062|ref|YP_003845695.1| ExsB family protein [Clostridium cellulovorans 743B]
gi|307687753|ref|ZP_07630199.1| ExsB family protein [Clostridium cellulovorans 743B]
gi|302579919|gb|ADL53931.1| ExsB family protein [Clostridium cellulovorans 743B]
Length = 261
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 70/189 (37%), Gaps = 43/189 (22%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ +K ++ FSGG DS+ L A D D V+ ++ +
Sbjct: 12 EYLKSLGKVVIAFSGGVDSTFLLRVAKDALGDNVKAVTI-------------------LS 52
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAA 120
+P+W+ + ++ + L + +I + + + + +D L T V
Sbjct: 53 PYIPRWEIAEAKELVKELGVKHEIIEAPIIEAIKYNPEDRCYLCKTAV-------FSMIL 105
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKY 178
++A G +V G D S Y R +RA+ + V +PL+ K
Sbjct: 106 SVAKEQGYDCVVDGTNFDDISDY---RPG-LRAL---------KELDVKSPLLVCKFTKA 152
Query: 179 ETWKLAQDI 187
E ++++
Sbjct: 153 EIRACSKEL 161
>gi|168207849|ref|ZP_02633854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens E str. JGS1987]
gi|169343749|ref|ZP_02864748.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens C str. JGS1495]
gi|169298309|gb|EDS80399.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens C str. JGS1495]
gi|170660837|gb|EDT13520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens E str. JGS1987]
Length = 359
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 3 KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVT 34
>gi|189485341|ref|YP_001956282.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[uncultured Termite group 1 bacterium phylotype Rs-D17]
gi|205828982|sp|B1GZY9|MNMA_UNCTG RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|170287300|dbj|BAG13821.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[uncultured Termite group 1 bacterium phylotype Rs-D17]
Length = 360
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ L+ SGG DS+ + V +
Sbjct: 1 METEMKILIGLSGGVDSAVAAYLLKKQGYEVTGTT 35
>gi|157813136|gb|ABV81313.1| putative GMP synthetase [Limulus polyphemus]
Length = 196
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG-QRNKVELECRLCVRK 58
L+L SGG DS+ C + +RV + + G R L+ +R+
Sbjct: 44 KKVLMLVSGGVDSTVCAALVHRALGEERVIAIHVNNGFMRKNESLQVEHSLRQ 96
>gi|149926700|ref|ZP_01914960.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Limnobacter sp. MED105]
gi|149824629|gb|EDM83845.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Limnobacter sp. MED105]
Length = 358
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 72/229 (31%), Gaps = 48/229 (20%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELECRLCVR 57
A + ++ SGG DSS + V L +Y + L+
Sbjct: 1 MAKTVVIGMSGGVDSSVSAWLLKQQGYNVIGLFMKNWEDDDDSEYCSSRQDWLDAASVAD 60
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
V++ S +D + + L + S+ + ++ + F
Sbjct: 61 VVGVDIEAVNFASEYKDRVFSV-FLSEY--SAGRTPNPDILCNSEIK----------FKA 107
Query: 118 FAATLAYRLGITNIVIG--------------VCETDYSGYPDCRHDTIRAIETAINLGME 163
F AY LG I G + D+S D + + + A
Sbjct: 108 F-LDHAYSLGADYIATGHYARVRELNGEFQLLKAVDHSK--DQSY-FLHRLNQAQLSKT- 162
Query: 164 SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
PL ++K E K+A ++G + + C++G+R R
Sbjct: 163 -----LFPLGEIQKTEVRKIALELGLANATKKD--STGICFIGERPFRE 204
>gi|92114249|ref|YP_574177.1| argininosuccinate synthase [Chromohalobacter salexigens DSM 3043]
gi|119361263|sp|Q1QVN0|ASSY_CHRSD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|91797339|gb|ABE59478.1| argininosuccinate synthase [Chromohalobacter salexigens DSM 3043]
Length = 406
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W + +D V T + D GQ +VE + E+
Sbjct: 1 MSDVKKVVLAYSGGLDTSVIVKWLQETYDCEVVTFTADIGQGEEVEPARAKAQALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 YIEDLREEFVRDYVYPMFRANTIYEGEYLLGTSIA 95
>gi|329766102|ref|ZP_08257661.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137373|gb|EGG41650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Nitrosoarchaeum limnia SFB1]
Length = 350
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ++ + L SGG DS + ++ V ++ + +C +I E
Sbjct: 16 VTEEKKKVVALLSGGLDSQLAVRMMQEQGFEVSAVAIK---TPFCDFDCGRGCGFEIREK 72
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L ++ I + K+ I P V R ++F A
Sbjct: 73 ADDLNVNLKTVYLGDEYI-------EMLKHPKHGIGAGFNPC--VDCRTMMF-NAAKKHM 122
Query: 124 YRLGITNIVIG 134
+G I+ G
Sbjct: 123 EEIGAEFIISG 133
>gi|319940913|ref|ZP_08015251.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sutterella wadsworthensis 3_1_45B]
gi|319805629|gb|EFW02417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sutterella wadsworthensis 3_1_45B]
Length = 382
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + K ++ SGG DSS ++ V L
Sbjct: 14 TEQMSKG-KVVVGLSGGVDSSVSAWLLKEQGYEVIGL 49
>gi|303256929|ref|ZP_07342943.1| tRNA(Ile)-lysidine synthase [Burkholderiales bacterium 1_1_47]
gi|302860420|gb|EFL83497.1| tRNA(Ile)-lysidine synthase [Burkholderiales bacterium 1_1_47]
Length = 478
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Query: 6 KKAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYG-QRNKVELE--CRLCVRK 58
+K + ++ FSGG DSS L + + + +G ++ E C +K
Sbjct: 45 EKPINVIVAFSGGLDSSVLLYAVSQLKGKSYGEITAVHVHHGLSKHANEWAEFCEERAKK 104
>gi|257125311|ref|YP_003163425.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Leptotrichia buccalis C-1013-b]
gi|257049250|gb|ACV38434.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Leptotrichia buccalis C-1013-b]
Length = 364
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
MN + ++ SGG DSS + V ++
Sbjct: 1 MNKKLDD-KKVVVGMSGGIDSSVAALLLKQQGYEVIGVT 38
>gi|85712895|ref|ZP_01043936.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Idiomarina baltica OS145]
gi|85693275|gb|EAQ31232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Idiomarina baltica OS145]
Length = 376
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 44/152 (28%), Gaps = 38/152 (25%)
Query: 1 MNDIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
M + K ++ SGG DSS L + +VE L + + + C
Sbjct: 1 MTESKKNPSETKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMK---NWEEDDDDEYCAAA 57
Query: 59 KIVELMPKWKDSLGE----------------DHILPLAILGDISHSSLTKNVAMKIQDNN 102
+ + LG +H L G + + N +K +
Sbjct: 58 DDLADAEAVCEKLGIELHTVNFAAEYWDNVFEHFLDEYKAGRTPNPDIMCNKEIKFKA-- 115
Query: 103 LPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 116 ------------FLEFA---AEALGADYIATG 132
>gi|332995610|gb|AEF05665.1| hypothetical protein ambt_20870 [Alteromonas sp. SN2]
Length = 424
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 75/235 (31%), Gaps = 39/235 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L LFSGG DS + + T+S ++ +K + + +SL
Sbjct: 140 LTLFSGGMDSLIGAINLIKDGRKPVTIS--------QVVQGDQAKQKLFPQKIHSDIESL 191
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII----------FLVFAAT 121
H + G+ S ++++A + L + + RN F+
Sbjct: 192 VMSHKAKVPN-GETPASQRSRSIAF-LAYAALATSSLKNRNGSNTELVVSENGFISLNTP 249
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
L +G T + + I+ I + + + TP K E
Sbjct: 250 LTPMR------VGSLSTRTTH-----PTYLSGIQE-IFDSADIGLKIDTPYALKTKGEML 297
Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
+ Q L+ + +S +C C C C +R+ + ++ E
Sbjct: 298 S---ECKNQSLIKELAHQSTSC----GRFLLFKKTHCGRCVPCLVRRSAFHKWGE 345
>gi|296157213|ref|ZP_06840049.1| argininosuccinate synthase [Burkholderia sp. Ch1-1]
gi|295892549|gb|EFG72331.1| argininosuccinate synthase [Burkholderia sp. Ch1-1]
Length = 408
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D +D V T + D GQ ++E R + ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-PARKKALQLGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 60 ENIYIEDLREEFVRD 74
>gi|260494072|ref|ZP_05814203.1| tRNA methyl transferase [Fusobacterium sp. 3_1_33]
gi|260198218|gb|EEW95734.1| tRNA methyl transferase [Fusobacterium sp. 3_1_33]
Length = 362
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
D KK + SGG DSST + + ++
Sbjct: 18 DSSKKNIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|237744375|ref|ZP_04574856.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 7_1]
gi|229431604|gb|EEO41816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 7_1]
Length = 362
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
D KK + SGG DSST + + ++
Sbjct: 18 DSSKKNIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|222149440|ref|YP_002550397.1| argininosuccinate synthase [Agrobacterium vitis S4]
gi|221736423|gb|ACM37386.1| argininosuccinate synthase [Agrobacterium vitis S4]
Length = 409
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 22/137 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ ++ +L +SGG D+S L W + + + T + D GQ ++E + R I +
Sbjct: 1 MAREIKKLVLAYSGGLDTSVVLKWLQETYGCEIITFTADLGQGEELEPARQNAQRLGIED 60
Query: 63 L-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---FLVF 118
+ + ++ D + P+ + ++ R +I +
Sbjct: 61 IRIDDLREEFVRDFVFPMMRANALYEGQYLLGSSI-------------ARPLIAKHLISI 107
Query: 119 AATLAYRLGITNIVIGV 135
A +G I G
Sbjct: 108 ----AQDVGADAIAHGA 120
>gi|221640121|ref|YP_002526383.1| tRNA(Ile)-lysidine synthetase [Rhodobacter sphaeroides KD131]
gi|221160902|gb|ACM01882.1| tRNA(Ile)-lysidine synthetase [Rhodobacter sphaeroides KD131]
Length = 412
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL----CVRKKIVELMPKWKDS 70
SGG DS L A + ++ D+G R + E R C + + +W+
Sbjct: 23 VSGGGDSMALLHLAAETGIATRAVTVDHGLRPEAADEARAVARVCAGLGVPHDILRWEGW 82
Query: 71 LGEDHILP------LAILGDISHSSLTKNVAMKIQDNNLPNTF 107
G +++ L ++ D + ++ + VA+ +++ TF
Sbjct: 83 DGRGNLMDQARRARLRLIADWARAAGLEAVALGHTRDDVAETF 125
>gi|194744309|ref|XP_001954637.1| GF16645 [Drosophila ananassae]
gi|190627674|gb|EDV43198.1| GF16645 [Drosophila ananassae]
Length = 443
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMP 65
+ +L +SGG D+S L W LD+ V + D GQ+ E + KK++ +
Sbjct: 28 ETVILAYSGGLDTSCILKWLLDQKYEVICVLADVGQKEDFVAAEKKALKIGAKKVI--VS 85
Query: 66 KWKDSLGEDHILPLAILGDI 85
K S ED+I P +G +
Sbjct: 86 DVKRSFVEDYIWPAVQMGLV 105
>gi|283795899|ref|ZP_06345052.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium sp. M62/1]
gi|291076535|gb|EFE13899.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium sp. M62/1]
Length = 359
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
+ ++ SGG DSS + V ++ Q + E
Sbjct: 2 EKKKVVVGMSGGVDSSVAAWLLKKQGYDVIGVTMQIWQDEEPE 44
>gi|198282965|ref|YP_002219286.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666259|ref|YP_002425168.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|259495823|sp|B7J5X6|MNMA_ACIF2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|259495824|sp|B5ENY8|MNMA_ACIF5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|198247486|gb|ACH83079.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518472|gb|ACK79058.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 352
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 15/129 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL+ SGG DS+ + + ++ R++ C +K +E +
Sbjct: 4 KKALIALSGGVDSAVAALLMQGQGYELTGVTMRLWPRSR-------CCDEKDIEDAAEIC 56
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLA--YR 125
LG + + + + + Q PN P R FL F A LA +
Sbjct: 57 ARLGIPYTV--LDYREAFRRQVVDVFVAEYQAGRTPN---PCARCNQFLKFDALLAEGEK 111
Query: 126 LGITNIVIG 134
LG T + G
Sbjct: 112 LGATMLATG 120
>gi|78044681|ref|YP_359926.1| hypothetical protein CHY_1080 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996796|gb|ABB15695.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 332
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS + + V L F
Sbjct: 1 MNNRALALFSGGLDSILAIKVSQRAGADVTALHF 34
>gi|332705642|ref|ZP_08425718.1| 5-methylaminomethyl-2-thiouridylate tRNA methyltransferase [Lyngbya
majuscula 3L]
gi|332355434|gb|EGJ34898.1| 5-methylaminomethyl-2-thiouridylate tRNA methyltransferase [Lyngbya
majuscula 3L]
Length = 362
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 39/135 (28%), Gaps = 28/135 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + + V L+ GQ C + +V+
Sbjct: 3 KVVVGLSGGVDSSVAAATLYHKGYEVVGLTLWLMKGKGQ----------CCSEGMVDAAF 52
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN------VAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ HI+ + + + + N F P L +A
Sbjct: 53 ICEQLGIPHHIVDSRDVFQENIVDYLVSGYQSGITPLPCSQCNKAVKFGP-----MLSYA 107
Query: 120 ATLAYRLGITNIVIG 134
LGI I G
Sbjct: 108 H---QTLGIDKIATG 119
>gi|327473924|gb|EGF19337.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK408]
Length = 404
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS AL R +E + F KK +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K ++ L T R + + G
Sbjct: 233 FGGNIQFIEVPF------TEIQEEIKAKAPESYLMTLT----R-RFMMRITDRIREERGA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + TI +++ AIN + V P++ + K E ++A+ I
Sbjct: 282 QVIINGESLGQVAS------QTIESMQ-AINAVTNTP--VIRPVVTMDKLEIIEIAEKID 332
Query: 189 GQDLVNLILEES 200
+ E+
Sbjct: 333 TFQISIQPFEDC 344
>gi|295091002|emb|CBK77109.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium cf. saccharolyticum K10]
Length = 359
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
+ ++ SGG DSS + V ++ Q + E
Sbjct: 2 EKKKVVVGMSGGVDSSVAAWLLKKQGYDVIGVTMQIWQDEEPE 44
>gi|281490922|ref|YP_003352902.1| thiamine biosynthesis AtP pyrophosphatase [Lactococcus lactis
subsp. lactis KF147]
gi|281374680|gb|ADA64200.1| Thiamine biosynthesis ATP pyrophosphatase [Lactococcus lactis
subsp. lactis KF147]
Length = 406
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS AL R +E + F
Sbjct: 184 LMLSGGIDSPVAGYLALKRGVEIEAVHF 211
>gi|260779096|ref|ZP_05887988.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio coralliilyticus ATCC BAA-450]
gi|260605260|gb|EEX31555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio coralliilyticus ATCC BAA-450]
Length = 373
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKKIVELM 64
++ SGG DSS + +VE L +N E + C + +
Sbjct: 8 NSKKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAEDLADA 63
Query: 65 PKWKDSLGED-HILPLA 80
D LG H + A
Sbjct: 64 QAVCDKLGIHLHTINFA 80
>gi|256823496|ref|YP_003147459.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Kangiella koreensis DSM 16069]
gi|256797035|gb|ACV27691.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Kangiella koreensis DSM 16069]
Length = 362
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 24/140 (17%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY------GQRNKVELECRLCVRKK 59
+K A+ L SGG DS ++ VE ++F Y G + + + K+
Sbjct: 15 QKQRKAVALISGGLDSLLAAKVIQEQGIHVEGINF-YTGFCVEGHTHAI---RKKDKDKQ 70
Query: 60 IVELMPKWKDSLGED-HILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL- 116
+ LG HI+ ++ DI + A + IF+
Sbjct: 71 KRNNSLWVAEQLGIKLHIIDISEEYKDIVLNPKHGYGANLNPCLDCK---------IFMV 121
Query: 117 --VFAATLAYRLGITNIVIG 134
A A G I+ G
Sbjct: 122 NQAQAWAWAEENGFDFIITG 141
>gi|198282708|ref|YP_002219029.1| Argininosuccinate synthase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666840|ref|YP_002424900.1| argininosuccinate synthase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247229|gb|ACH82822.1| Argininosuccinate synthase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519053|gb|ACK79639.1| argininosuccinate synthase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 399
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE--- 62
+L +SGG D+S L W D++ V T + D GQ ELE +K+
Sbjct: 1 MVKKVVLAYSGGLDTSVILKWLQDQYQCDVVTFTADIGQ--GEELEPARAKAEKLGAREI 58
Query: 63 LMPKWKDSLGEDHILPL 79
+ + D++ P+
Sbjct: 59 FIDDLRQEFVRDYVFPM 75
>gi|125623264|ref|YP_001031747.1| thiamine biosynthesis protein thiI [Lactococcus lactis subsp.
cremoris MG1363]
gi|189030636|sp|A2RIA6|THII_LACLM RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|124492072|emb|CAL97000.1| thiamine biosynthesis protein thiI [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070014|gb|ADJ59414.1| thiamine biosynthesis protein ThiI [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 406
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS AL R +E + F
Sbjct: 184 LMLSGGIDSPVAGYLALKRGVEIEAVHF 211
>gi|121596352|ref|YP_988248.1| tRNA-specific 2-thiouridylase MnmA [Acidovorax sp. JS42]
gi|205811052|sp|A1WD47|MNMA_ACISJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|120608432|gb|ABM44172.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidovorax sp. JS42]
Length = 379
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DS+ + V +
Sbjct: 2 KKHRVVVGLSGGVDSAVTAHLLKQQGHEVVGI 33
>gi|89890355|ref|ZP_01201865.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Flavobacteria bacterium BBFL7]
gi|89517270|gb|EAS19927.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Flavobacteria bacterium BBFL7]
Length = 392
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KVVVGLSGGVDSSVAAYLLKEQGHEVIGL 31
>gi|27904738|ref|NP_777864.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|29428172|sp|P59460|MNMA_BUCBP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|27904135|gb|AAO26969.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Buchnera aphidicola str. Bp (Baizongia pistaciae)]
Length = 370
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS + VE L
Sbjct: 1 MYKLNKKVIVAMSGGVDSSVTAWILKKKGYHVEGL 35
>gi|15672361|ref|NP_266535.1| hypothetical protein L183112 [Lactococcus lactis subsp. lactis
Il1403]
gi|20140769|sp|Q9CII1|THII_LACLA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|12723251|gb|AAK04477.1|AE006275_1 hypothetical protein L183112 [Lactococcus lactis subsp. lactis
Il1403]
gi|326405955|gb|ADZ63026.1| thiamine biosynthesis AtP pyrophosphatase [Lactococcus lactis
subsp. lactis CV56]
Length = 406
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS AL R +E + F
Sbjct: 184 LMLSGGIDSPVAGYLALKRGVEIEAVHF 211
>gi|150388488|ref|YP_001318537.1| argininosuccinate synthase [Alkaliphilus metalliredigens QYMF]
gi|172052473|sp|A6TL10|ASSY_ALKMQ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|149948350|gb|ABR46878.1| Argininosuccinate synthase [Alkaliphilus metalliredigens QYMF]
Length = 414
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 40/140 (28%), Gaps = 30/140 (21%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
K +L +SGG D+S L W + + V + GQ E + +
Sbjct: 3 TKNKKKVVLAYSGGLDTSVILKWLEETYGYEVIAACVNVGQ---TEDFAAIKKKALATGA 59
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---- 119
+ + E+ I T +D+ L T FA
Sbjct: 60 SKAYIVDVTEEFITDYIF--------PTLKAGAVYEDDYLLGT----------SFARPLI 101
Query: 120 ----ATLAYRLGITNIVIGV 135
+A + G I G
Sbjct: 102 SKKLVEIAEKEGAVAIAHGA 121
>gi|326692751|ref|ZP_08229756.1| argininosuccinate synthase [Leuconostoc argentinum KCTC 3773]
Length = 409
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ +L +SGG D+S + W ++ V + + GQ + +++ K+
Sbjct: 1 MTETLVLAYSGGLDTSVAIPWLKEKGYDVIAVVLNVGQ-HGKDMDMIQAKALKVGASQSI 59
Query: 67 WKDSLGE 73
D+ E
Sbjct: 60 VIDAQAE 66
>gi|301022586|ref|ZP_07186458.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 69-1]
gi|300397467|gb|EFJ81005.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
coli MS 69-1]
Length = 482
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARHIGTEDFART 339
>gi|291458888|ref|ZP_06598278.1| argininosuccinate synthase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418142|gb|EFE91861.1| argininosuccinate synthase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 417
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 1 MNDIIKKAP----SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE-LECRL 54
M ++ K +L +SGG D++ + W + V + D GQ +++ L R
Sbjct: 1 MGKLMPKNKTQGEKVVLAYSGGLDTTAIIPWLKENFGYEVICVCVDVGQGEELDGLSERA 60
Query: 55 CVRKKIVELMPKWKDSLGEDHILP 78
+ + D E+++LP
Sbjct: 61 KLSGAAKLYIEDISDDFCENYVLP 84
>gi|226951268|ref|ZP_03821732.1| argininosuccinate synthase [Acinetobacter sp. ATCC 27244]
gi|294650785|ref|ZP_06728134.1| argininosuccinate synthase [Acinetobacter haemolyticus ATCC 19194]
gi|226838009|gb|EEH70392.1| argininosuccinate synthase [Acinetobacter sp. ATCC 27244]
gi|292823331|gb|EFF82185.1| argininosuccinate synthase [Acinetobacter haemolyticus ATCC 19194]
Length = 447
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGSEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|225407981|ref|ZP_03761170.1| hypothetical protein CLOSTASPAR_05202 [Clostridium asparagiforme
DSM 15981]
gi|225042484|gb|EEG52730.1| hypothetical protein CLOSTASPAR_05202 [Clostridium asparagiforme
DSM 15981]
Length = 291
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 63/180 (35%), Gaps = 42/180 (23%)
Query: 15 FSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
FSGG DSS L A+ +V ++FD +LE V ++
Sbjct: 42 FSGGVDSSLLLKAAVQAAEHTGRQVWAVTFDSRLHPSCDLEIAGRVAAELG--------- 92
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
G ++ + L +I++N + ++ R A GI
Sbjct: 93 -GVHRVITVDELEQ-----------EEIRNNPVDRCYLCKR--HLFSTLKAFARERGIKR 138
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLKKYETWKLAQDIG 188
I+ G E D Y R IRA+ + + +PL + + K + +LA G
Sbjct: 139 ILDGTNEDDLHVY---RPG-IRAL---------RELGITSPLADLHITKAQVKELAAWYG 185
>gi|85374397|ref|YP_458459.1| argininosuccinate synthase [Erythrobacter litoralis HTCC2594]
gi|122544222|sp|Q2N9H9|ASSY_ERYLH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|84787480|gb|ABC63662.1| argininosuccinate synthase [Erythrobacter litoralis HTCC2594]
Length = 404
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+ +L +SGG D+S W ++R V T + D GQ ++E I +
Sbjct: 1 MPDIKRVVLAYSGGLDTSVIAKWLEVERGLEVVTFTADLGQGEELEPARAKAQAMGIPDK 60
Query: 63 --LMPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 HIFIEDLREEFVRDYVFPM 79
>gi|325121410|gb|ADY80933.1| argininosuccinate synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 452
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 26 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 77
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 78 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 106
>gi|323483781|ref|ZP_08089161.1| hypothetical protein HMPREF9474_00910 [Clostridium symbiosum
WAL-14163]
gi|323402972|gb|EGA95290.1| hypothetical protein HMPREF9474_00910 [Clostridium symbiosum
WAL-14163]
Length = 392
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 62/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +E F + +K +
Sbjct: 176 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVTIEATYF-----HAPPYTSERAKQKVIDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ ++ + + I I + + + ++ + A
Sbjct: 231 KLVSRYSGPIKLHVVNFTDIQLYIYDKCPHEELTIIMRRY-------------MMKIAEE 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
LA + G ++ G + T+ ++ + + V P++ K E
Sbjct: 278 LAMKDGCLGLITGESIGQVAS------QTVHSLAVTNEVCT---LPVFRPVIGFDKQEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++Q IG + E+
Sbjct: 329 DISQKIGTFETSIEPFEDC 347
>gi|322507305|gb|ADX02759.1| argG [Acinetobacter baumannii 1656-2]
Length = 452
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 26 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 77
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 78 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 106
>gi|299771036|ref|YP_003733062.1| argininosuccinate synthase [Acinetobacter sp. DR1]
gi|298701124|gb|ADI91689.1| argininosuccinate synthase [Acinetobacter sp. DR1]
Length = 447
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|293608823|ref|ZP_06691126.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829396|gb|EFF87758.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 447
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|262372873|ref|ZP_06066152.1| argininosuccinate synthase [Acinetobacter junii SH205]
gi|262312898|gb|EEY93983.1| argininosuccinate synthase [Acinetobacter junii SH205]
Length = 447
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|262279763|ref|ZP_06057548.1| argininosuccinate synthase [Acinetobacter calcoaceticus RUH2202]
gi|262260114|gb|EEY78847.1| argininosuccinate synthase [Acinetobacter calcoaceticus RUH2202]
Length = 447
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|260550761|ref|ZP_05824969.1| argininosuccinate synthase [Acinetobacter sp. RUH2624]
gi|260406267|gb|EEW99751.1| argininosuccinate synthase [Acinetobacter sp. RUH2624]
Length = 447
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|239503318|ref|ZP_04662628.1| argininosuccinate synthase [Acinetobacter baumannii AB900]
gi|260557374|ref|ZP_05829589.1| argininosuccinate synthase [Acinetobacter baumannii ATCC 19606]
gi|260409000|gb|EEX02303.1| argininosuccinate synthase [Acinetobacter baumannii ATCC 19606]
Length = 447
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|184157425|ref|YP_001845764.1| argininosuccinate synthase [Acinetobacter baumannii ACICU]
gi|332854539|ref|ZP_08435417.1| argininosuccinate synthase [Acinetobacter baumannii 6013150]
gi|332870166|ref|ZP_08439078.1| argininosuccinate synthase [Acinetobacter baumannii 6013113]
gi|332875104|ref|ZP_08442940.1| argininosuccinate synthase [Acinetobacter baumannii 6014059]
gi|183209019|gb|ACC56417.1| Argininosuccinate synthase [Acinetobacter baumannii ACICU]
gi|323517324|gb|ADX91705.1| argininosuccinate synthase [Acinetobacter baumannii TCDC-AB0715]
gi|332727948|gb|EGJ59343.1| argininosuccinate synthase [Acinetobacter baumannii 6013150]
gi|332732433|gb|EGJ63689.1| argininosuccinate synthase [Acinetobacter baumannii 6013113]
gi|332736721|gb|EGJ67712.1| argininosuccinate synthase [Acinetobacter baumannii 6014059]
Length = 452
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 26 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 77
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 78 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 106
>gi|169338047|ref|ZP_02621467.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum C str. Eklund]
gi|169295231|gb|EDS77364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum C str. Eklund]
Length = 350
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+I + + SGG DSS ++ + ++
Sbjct: 1 MINMSKKVAVGLSGGVDSSVAAYLLKEKGYDLIGIT 36
>gi|169633088|ref|YP_001706824.1| argininosuccinate synthase [Acinetobacter baumannii SDF]
gi|169151880|emb|CAP00724.1| argininosuccinate synthetase [Acinetobacter baumannii]
Length = 447
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|169796658|ref|YP_001714451.1| argininosuccinate synthase [Acinetobacter baumannii AYE]
gi|213156114|ref|YP_002318534.1| argininosuccinate synthase [Acinetobacter baumannii AB0057]
gi|215484150|ref|YP_002326375.1| argininosuccinate synthase [Acinetobacter baumannii AB307-0294]
gi|301347760|ref|ZP_07228501.1| argininosuccinate synthase [Acinetobacter baumannii AB056]
gi|301512249|ref|ZP_07237486.1| argininosuccinate synthase [Acinetobacter baumannii AB058]
gi|301596671|ref|ZP_07241679.1| argininosuccinate synthase [Acinetobacter baumannii AB059]
gi|169149585|emb|CAM87474.1| argininosuccinate synthetase [Acinetobacter baumannii AYE]
gi|213055274|gb|ACJ40176.1| argininosuccinate synthase [Acinetobacter baumannii AB0057]
gi|213988022|gb|ACJ58321.1| argininosuccinate synthase [Acinetobacter baumannii AB307-0294]
Length = 447
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|50084343|ref|YP_045853.1| argininosuccinate synthase [Acinetobacter sp. ADP1]
gi|49530319|emb|CAG68031.1| argininosuccinate synthetase [Acinetobacter sp. ADP1]
Length = 446
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + ++ + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LIDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|206902001|ref|YP_002251471.1| hypothetical protein DICTH_1659 [Dictyoglomus thermophilum
H-6-12]
gi|206741104|gb|ACI20162.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12]
Length = 268
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ +K+ ++ +SGG DS+ L A D + V ++ KK +
Sbjct: 10 NFLKECQKVIVAYSGGVDSTFLLKIAKDTLGENVLAVTL-----------VSPIFPKKEI 58
Query: 62 ELMPKWKDSLGEDHIL 77
E ++ L HI+
Sbjct: 59 EEAKEFAKKLKVQHII 74
>gi|189460624|ref|ZP_03009409.1| hypothetical protein BACCOP_01265 [Bacteroides coprocola DSM 17136]
gi|189432583|gb|EDV01568.1| hypothetical protein BACCOP_01265 [Bacteroides coprocola DSM 17136]
Length = 374
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 11/134 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
++K L+ SGG DSS ++ V ++ D + + +I+
Sbjct: 1 MEKEKRILVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDIPSHFSTPEQEQ---PDEIL 57
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV-FAA 120
E + E H+ + + + + + + PN V N +F
Sbjct: 58 EAKALAERLGIEHHVADV---REEFRNVIVQYFIDEYMKGRTPNPCVMC-NPLFKERILC 113
Query: 121 TLAYRLGITNIVIG 134
A R G I G
Sbjct: 114 EWADRTGCAQIATG 127
>gi|158521761|ref|YP_001529631.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfococcus oleovorans Hxd3]
gi|205816872|sp|A9A0S9|MNMA_DESOH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|158510587|gb|ABW67554.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfococcus oleovorans Hxd3]
Length = 358
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 10/28 (35%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L SGG DS V + F
Sbjct: 21 VLVSGGIDSLVAAHLLKQSGADVTAIHF 48
>gi|328463085|gb|EGF34856.1| thiamine biosynthesis protein ThiI [Lactobacillus rhamnosus MTCC
5462]
Length = 110
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A L+ SGG DS +AL R +ET+ F
Sbjct: 5 RAALMLSGGIDSPVAGYYALKRGVDIETVHF 35
>gi|293372701|ref|ZP_06619083.1| tRNA(Ile)-lysidine synthetase [Bacteroides ovatus SD CMC 3f]
gi|292632510|gb|EFF51106.1| tRNA(Ile)-lysidine synthetase [Bacteroides ovatus SD CMC 3f]
Length = 426
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 58/196 (29%), Gaps = 43/196 (21%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+ SGG DS L E ++ R K E + +++ E M
Sbjct: 20 DKILIALSGGADSVALLYILHTAGYHCEAAHCNFHLRGK-ESDRDELFVRQLCERMEIHL 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYRLG 127
H + + + K++++++ L + R +
Sbjct: 79 ------HTIDFNT----TQYATEKHISIEMAARELRYQWFEKIR------------KKCQ 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
+ + + D I I + G + + PL+ + +
Sbjct: 117 ADVVAVAHHQDDS----------IETILLNLIRGTGITGLLGIRPRNGAIVRPLLCINRE 166
Query: 179 ETWKLAQDIGGQDLVN 194
E + Q+IG + +
Sbjct: 167 EIIRYLQNIGQDYVTD 182
>gi|262282604|ref|ZP_06060372.1| thiamine biosynthesis protein ThiI [Streptococcus sp. 2_1_36FAA]
gi|262261895|gb|EEY80593.1| thiamine biosynthesis protein ThiI [Streptococcus sp. 2_1_36FAA]
Length = 404
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 63/192 (32%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS AL R +E + F KK +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K + L T R + + G
Sbjct: 233 FGGNIQFIEVPF------TEIQEEIKAKAPEAYLMTLT----R-RFMMRITDRIREERGA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IV G + TI +++ AIN + V P++ + K E ++A+ I
Sbjct: 282 QVIVNGESLGQVAS------QTIESMQ-AINAVTNTP--VIRPVVTMDKLEIIEIAEKID 332
Query: 189 GQDLVNLILEES 200
+ E+
Sbjct: 333 TFQISIQPFEDC 344
>gi|225849954|ref|YP_002730188.1| tRNA(Ile)-lysidine synthase [Persephonella marina EX-H1]
gi|254789038|sp|C0QU23|TILS_PERMH RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|225646259|gb|ACO04445.1| tRNA(Ile)-lysidine synthase [Persephonella marina EX-H1]
Length = 452
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 46/211 (21%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-----RFDRVETLSFDYGQRNKVELECRLCVR 57
+I + L+ FSGG DS+ + + + ++ R + + + R C
Sbjct: 14 SLISEGDRILVAFSGGIDSTVLTYLLIKFRDHLKISDIYLAHLNHSLRKESDEDQRFC-- 71
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ K+ + + DI + + +++ + +F R ++
Sbjct: 72 ---EDFAKKYGLEIFTKKV-------DIKSLAEKEKKSIEQKAREERYSF--FRKVM--- 116
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--------VH 169
I + G +D + + G + +
Sbjct: 117 ------EERSINRLATGHHLSDL----------VETMIMWFIQGNRKGIKGFRPKERDII 160
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEES 200
PL + K + A++ G + +++ E+
Sbjct: 161 RPLYLINKDQIENYAREKGIEYRIDITNFET 191
>gi|225012689|ref|ZP_03703124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Flavobacteria bacterium MS024-2A]
gi|225003222|gb|EEG41197.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Flavobacteria bacterium MS024-2A]
Length = 394
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS V L
Sbjct: 5 RIIVGLSGGVDSSVAAYLLKKEGYEVIGL 33
>gi|153814505|ref|ZP_01967173.1| hypothetical protein RUMTOR_00719 [Ruminococcus torques ATCC
27756]
gi|317500546|ref|ZP_07958768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|331089354|ref|ZP_08338254.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847999|gb|EDK24917.1| hypothetical protein RUMTOR_00719 [Ruminococcus torques ATCC
27756]
gi|316898056|gb|EFV20105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|330405417|gb|EGG84952.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
3_1_46FAA]
Length = 356
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 2 KKVVVGMSGGVDSSVAAYLLKEQGYDVIGVT 32
>gi|91785024|ref|YP_560230.1| argininosuccinate synthase [Burkholderia xenovorans LB400]
gi|119361260|sp|Q13UR1|ASSY_BURXL RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|91688978|gb|ABE32178.1| argininosuccinate synthase [Burkholderia xenovorans LB400]
Length = 408
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D +D V T + D GQ ++E R + ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-PARKKALQLGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 60 ENIFIEDLREEFVRD 74
>gi|307824462|ref|ZP_07654687.1| tRNA methyl transferase-like protein [Methylobacter tundripaludum
SV96]
gi|307734446|gb|EFO05298.1| tRNA methyl transferase-like protein [Methylobacter tundripaludum
SV96]
Length = 348
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ K A+ L SGG DS +++ VE ++F
Sbjct: 1 MSKQRKAVALISGGLDSMLAAKTIMEQGVHVEGINF 36
>gi|262306077|gb|ACY45631.1| gln amidotransferase [Machiloides banksi]
Length = 198
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 8 APSALLLFSGGQDSSTC---LSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVE 62
LLL SGG DS+ C L AL D+V + D G ++++ + + + K +
Sbjct: 43 NSKVLLLVSGGVDSTVCGALLHKALPE-DQVIGVHIDNGFMRKHESQ-KVEQSLAKVGLR 100
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTK 92
L + + I + T+
Sbjct: 101 LRAVRAAHTFSNATTTIPIDKKEGGGARTR 130
>gi|291518754|emb|CBK73975.1| conserved hypothetical protein TIGR00268 [Butyrivibrio fibrisolvens
16/4]
Length = 269
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 44/210 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ IKK + FS G DS+ L A D ++ + K+
Sbjct: 12 EYIKKLDRVAVAFSSGVDSTFLLYAARQALGDDAIAIT-----------AISDLIPKREQ 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ ++ + G I+ A + S + I L + A
Sbjct: 61 DEASQFCNERGIKQIVYKANPFEEDGFSGNPSNRCYICKKYLYS--------HMKALALG 112
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
I +++ G D Y R ++ LG+ S + V + K E
Sbjct: 113 Y----DIQHVLEGSNLDDEGDY---RPG----MQAIAELGILSPLRV----IGFTKQEIR 157
Query: 182 KLAQDIGGQ---------DLVNLILEESHT 202
L+ G + EE+ T
Sbjct: 158 DLSAQFGLPTANKPSFACLASRIPYEETIT 187
>gi|257468245|ref|ZP_05632341.1| argininosuccinate synthase [Fusobacterium ulcerans ATCC 49185]
gi|317062526|ref|ZP_07927011.1| argininosuccinate synthase [Fusobacterium ulcerans ATCC 49185]
gi|313688202|gb|EFS25037.1| argininosuccinate synthase [Fusobacterium ulcerans ATCC 49185]
Length = 399
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 20/133 (15%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQR---NKVELECRLCVRKKIVE 62
+L +SGG D+S + W + +D V ++ D GQ+ VE + K
Sbjct: 1 MKEKVVLAYSGGLDTSVIIPWLKENYDFDVIAVAVDVGQKDDFAAVEKKALQIGASKF-- 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
K+ L D I+P+ L + T + I + V +
Sbjct: 59 YAADKKEELVNDFIIPM--LKSGAKYEGTYLLGTSIARPVIAKALVE------------I 104
Query: 123 AYRLGITNIVIGV 135
A + G + IV G
Sbjct: 105 AQQEGASYIVHGA 117
>gi|170290101|ref|YP_001736917.1| ExsB family protein [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174181|gb|ACB07234.1| ExsB family protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 260
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
I++K +++ SGG DSST + D+ ++ + + E+E V ++I
Sbjct: 8 IVEKGKDGVIIALSGGLDSSTLAALCKKLLGDKAIAVTVASELQPEEEIEGARRVAEEIG 67
Query: 62 ELMPKWKDSLGEDHI 76
+ SL ++ +
Sbjct: 68 IRHILIEVSLLKEEV 82
>gi|157736745|ref|YP_001489428.1| tRNA-specific 2-thiouridylase MnmA [Arcobacter butzleri RM4018]
gi|205810156|sp|A8ES35|MNMA1_ARCB4 RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|157698599|gb|ABV66759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arcobacter butzleri RM4018]
Length = 345
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 53/190 (27%), Gaps = 26/190 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DSS + VE + R E L + + + +
Sbjct: 2 SKKKVMVGMSGGIDSSVTAYMLQNEGYEVEGIYLKLHNRTDGYHEKNLGYIEDVAKFLNI 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLAYR 125
+ +IL LA + PN V R I F A +
Sbjct: 62 ------KYYILDLADKFSKEVYDYFVDS---YLTGTTPNPCVKCNRQIKFGAM-LDFAKQ 111
Query: 126 LGITNIVIGVCE-TDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMWLKK 177
G + + G TD A + + ++ + PL KK
Sbjct: 112 HGASYLATGHYAKTDG-------KFFYEADDKTKDQSYFLSQVDKDALKYMMFPLSTYKK 164
Query: 178 YETWKLAQDI 187
+ K +
Sbjct: 165 EDIVKFGAKL 174
>gi|145354797|ref|XP_001421662.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581900|gb|ABO99955.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 402
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 10 SALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
SA++L +SGG D+S L W D + V T + D GQ ++E + + E+
Sbjct: 3 SAVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAAQFGVKEIFVDD 62
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D++ P+ + + ++
Sbjct: 63 LREEFVRDYVFPMFRANALYEGTYLLGTSIA 93
>gi|308071028|ref|YP_003872633.1| asparagine synthase [Paenibacillus polymyxa E681]
gi|305860307|gb|ADM72095.1| Asparagine synthase (glutamine-hydrolyzing) [Paenibacillus polymyxa
E681]
Length = 512
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 50/186 (26%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRL--CVRKKIV---ELMPKW 67
SGG DS+ + A T+ F DY + E+ R + I+ +
Sbjct: 246 YLSGGLDSTIITALAKVEH--TWTVGFEDYNEFQWSEIAARRYNTIHHPILFEPDHFLSL 303
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
L PL++ ++ +T+ + +N + L G
Sbjct: 304 ARELITVKKEPLSVPNEVLLYHMTQQAS--------------AKNTVILS-------GEG 342
Query: 128 ITNIVIGVCE--------TDYSGYPDCRHDTIRAIETAINLGMESHVTVH----TPLMWL 175
+ G TD+ IRA G E + + P + L
Sbjct: 343 ADELFFGYDRIFRWASSTTDFD---------IRAFSELYTYGSEDDIEIVEDALAPFLKL 393
Query: 176 KKYETW 181
K +
Sbjct: 394 KSPQKI 399
>gi|262306091|gb|ACY45638.1| gln amidotransferase [Polyzonium germanicum]
Length = 197
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG-QRNKVELECRLCVRK 58
L++ SGG DS+ C + + D+V L D G R E + K
Sbjct: 45 KVLMMLSGGVDSTVCAALLNKALKADQVIALHIDNGFMRKGESEEVANNLAK 96
>gi|227431943|ref|ZP_03913963.1| argininosuccinate synthase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352228|gb|EEJ42434.1| argininosuccinate synthase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 408
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 32/195 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
+L +SGG D+S + W D+ V + D GQ K E++ + ++ K
Sbjct: 6 VLAYSGGLDTSVAIPWLKDKGYDVIAVVLDVGQHGKNLNEIQEKALKVGAKQSIVIDVKG 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ ++ P+ + A+ + + +A+
Sbjct: 66 EFADKYVAPVIKANMMYEGEYPMVSALSRP--------------LIIKKLVDIAHENDAV 111
Query: 130 NIVIGV--CETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYETWKLAQ 185
I G D E AI+ ++ + + P+ + E + AQ
Sbjct: 112 AIAHGSTGHGNDQV-----------RFEAAIH-ALDPDMKIEAPIRDFQWSREEEIQYAQ 159
Query: 186 DIGGQDLVNLILEES 200
+ ++L S
Sbjct: 160 EHDVPVPIDLDSPYS 174
>gi|205822290|sp|Q122U9|MNMA_POLSJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 401
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ K ++ SGG DS+ + V +
Sbjct: 1 MDKQHSK-QRIVVGLSGGVDSAVTAYLLKQQGHEVIGI 37
>gi|115376200|ref|ZP_01463442.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310821768|ref|YP_003954126.1| hypothetical protein STAUR_4519 [Stigmatella aurantiaca DW4/3-1]
gi|115366773|gb|EAU65766.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309394840|gb|ADO72299.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 293
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 72/255 (28%), Gaps = 64/255 (25%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCV 56
M I+ +AL+ FSGG DS+ L A++ V LS + E E R
Sbjct: 21 MRAAIRAHGTALVAFSGGVDSTFVLKVAVEELGERALAVTALSASVAP--EEEQEARELA 78
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+ + L + ++ +
Sbjct: 79 ARFGARHEVLTSNELANPQYAANPTNRCYFCKTELYDLCEARRQ---------------- 122
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MW 174
A A L G D+ D R A E V +PL
Sbjct: 123 --ALGYAVVLD------GFNADDFK---DHRPGHKAAQEH----------RVQSPLAQAG 161
Query: 175 LKKYETWKLAQDIGGQ---------DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
L K E + +G + S T R++ ++ +
Sbjct: 162 LTKEEIRAWSHHLGLPTWDKPQMACLASRIPYGTSVT-----RERLFQIARA----ES-E 211
Query: 226 LRQKGWMEFKEKYQD 240
LR+ G+ +F+ +Y +
Sbjct: 212 LRRMGFRQFRVRYHE 226
>gi|91790389|ref|YP_551341.1| tRNA-specific 2-thiouridylase MnmA [Polaromonas sp. JS666]
gi|91699614|gb|ABE46443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Polaromonas sp. JS666]
Length = 421
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ K ++ SGG DS+ + V +
Sbjct: 21 MDKQHSK-QRIVVGLSGGVDSAVTAYLLKQQGHEVIGI 57
>gi|304407668|ref|ZP_07389319.1| argininosuccinate synthase [Paenibacillus curdlanolyticus YK9]
gi|304343151|gb|EFM08994.1| argininosuccinate synthase [Paenibacillus curdlanolyticus YK9]
Length = 411
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVELMP 65
+L +SGG D+S L W + +D + + D GQ+ +++ LE + +
Sbjct: 3 KEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEAKALATGASKVYID 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ D I P+ G + ++
Sbjct: 63 DLTEEFASDFIYPMFQAGALYEGQYLLGTSIA 94
>gi|260769298|ref|ZP_05878231.1| NAD synthetase [Vibrio furnissii CIP 102972]
gi|260614636|gb|EEX39822.1| NAD synthetase [Vibrio furnissii CIP 102972]
Length = 276
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 66/204 (32%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC--LSW----ALDR-----FDRVETLSFDYG-QRNKVE 49
+ + AL+L SGG DS+TC L+ AL++ + + YG Q+++ E
Sbjct: 31 KLTESGCKALVLGISGGIDSTTCGRLAQLAVDALNQEHGTDQYKFVAVRLPYGAQKDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L ++ + N+
Sbjct: 91 AQQALAFIQPTFSVSVNIKAGVDGLHAASHDALAGTGL-IPSEAAKIDFVKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + ++A +G +L+
Sbjct: 188 APLFGLSKRQVRQVAAALGAPELL 211
>gi|256822321|ref|YP_003146284.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Kangiella koreensis DSM 16069]
gi|256795860|gb|ACV26516.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Kangiella koreensis DSM 16069]
Length = 367
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D + ++ SGG DSS + +VE L
Sbjct: 1 MTDKAPENTHVIVGMSGGVDSSVSAYLLKKQGYQVEGL 38
>gi|281422007|ref|ZP_06253006.1| conserved hypothetical protein [Prevotella copri DSM 18205]
gi|281403965|gb|EFB34645.1| conserved hypothetical protein [Prevotella copri DSM 18205]
Length = 473
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 85/248 (34%), Gaps = 53/248 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKVELECRLCVRKKIVELMPK 66
+ LFSGG DS + D TLS + + + +EL C +K I+ +
Sbjct: 147 VALFSGGLDS------LIGFIDETNTLSVN---KKILLVSHMELGKEHCDQKSILGYCRE 197
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + ++ K + ++ +TF R+++F +A+++
Sbjct: 198 NN--------IFQNKFEQVLLNAGLKPKSWNVKGTPSESTFR-SRSLLFFAAGIYVAHKM 248
Query: 127 -----------GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHT 170
G +I I + S C I+ I+ A+ L + + T +
Sbjct: 249 SPNTPLIVPENGTISINIPLDSGRRSA---CSTRTTHPTFIKRIQEALQL-VGINNTFYN 304
Query: 171 PLMWLKKYETWKLAQ-DIGGQDLVNLILEESHTCYL-GKRDKRYEWGY--------GCNS 220
P K + K D+ ++ + +S +C G + G C
Sbjct: 305 PYRLKSKADMMKDCDNDVNKSVILRQLYSKSCSCAKRGHNSHWDKPGDVIRNKKITHCGM 364
Query: 221 CPACYLRQ 228
C C R+
Sbjct: 365 CLPCLYRR 372
>gi|332704481|ref|ZP_08424569.1| PP-loop domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332554630|gb|EGJ51674.1| PP-loop domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 311
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 7/81 (8%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-------QRNKVELECRL 54
+ + L+ SGG+DS + D+ V L G R+ VE C
Sbjct: 41 HGMFGPQDKILVALSGGKDSLALMYELADQGYDVTGLHVYLGIGRSSEQARHLVESFCAK 100
Query: 55 CVRKKIVELMPKWKDSLGEDH 75
K ++ MP ++ E
Sbjct: 101 HGFKLMIADMPAEGLAIPEVK 121
>gi|323703499|ref|ZP_08115145.1| argininosuccinate synthase [Desulfotomaculum nigrificans DSM 574]
gi|323531490|gb|EGB21383.1| argininosuccinate synthase [Desulfotomaculum nigrificans DSM 574]
Length = 401
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
P +L +SGG D+S ++W + + V L+ D GQ + LE + +
Sbjct: 2 PKVVLAYSGGLDTSIIIAWLKENYGYDVIALTADLGQGEELAPLEEKAIKSGASKIYIED 61
Query: 67 WKDSLGEDHILPLAILGDI 85
+ ED+I P G I
Sbjct: 62 LRKEFVEDYIFPTLKAGAI 80
>gi|322491706|emb|CBZ26978.1| putative GMP synthase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 656
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L L SGG DS+ C L +RV + D+G
Sbjct: 223 QKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHG 259
>gi|303326374|ref|ZP_07356817.1| ThiI family protein [Desulfovibrio sp. 3_1_syn3]
gi|302864290|gb|EFL87221.1| ThiI family protein [Desulfovibrio sp. 3_1_syn3]
Length = 386
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ P ++LFSGG DS D+ +V L
Sbjct: 22 MTATPDVIVLFSGGLDSILAAKLLEDQGLKVRCLH 56
>gi|256082831|ref|XP_002577656.1| GMP synthetase [Schistosoma mansoni]
gi|238662982|emb|CAZ33894.1| GMP synthetase (glutamine-hydrolysing) [Schistosoma mansoni]
Length = 739
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG 43
L+L SGG DS+ C + D ++ + D G
Sbjct: 214 KILILLSGGVDSTVCAALLSKTLDPSQIIAVHIDNG 249
>gi|189461693|ref|ZP_03010478.1| hypothetical protein BACCOP_02357 [Bacteroides coprocola DSM
17136]
gi|189431580|gb|EDV00565.1| hypothetical protein BACCOP_02357 [Bacteroides coprocola DSM
17136]
Length = 353
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL---ECRLCVRKKI 60
+++ LL SGG DSS D V ++F Y + N E LC R I
Sbjct: 1 MQENNKVLLGMSGGTDSSVAALLLQDAGYEVTGVTFRFYEKDNNTEYLDDARELCERLHI 60
Query: 61 VELMPKWKDSLGEDHI 76
+ ++ E I
Sbjct: 61 SHITYDARNEFRERII 76
>gi|171464102|ref|YP_001798215.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193640|gb|ACB44601.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 370
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS ++ V L
Sbjct: 10 PSSRPKKVVIGMSGGVDSSVAAWMLKEQGFEVIGL 44
>gi|57234425|ref|YP_181511.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalococcoides ethenogenes 195]
gi|123618735|sp|Q3Z8D8|MNMA_DEHE1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|57224873|gb|AAW39930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalococcoides ethenogenes 195]
Length = 357
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 17/88 (19%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-------YGQ-------RN 46
MND + ++ SGG DSS L++ V +S YG
Sbjct: 1 MNDT---SELIMVAMSGGVDSSVAAMLLLEQGYDVAGVSLQLKSNNEPYGNGYNLKLINR 57
Query: 47 KVELECRLCVRKKIVELMPKWKDSLGED 74
E+ L + +V+L + + D
Sbjct: 58 AREVAAALGIPHYVVDLSDIFSQRVIAD 85
>gi|313158300|gb|EFR57702.1| putative argininosuccinate synthase [Alistipes sp. HGB5]
Length = 400
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 18/132 (13%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ +L FSGG D S + ++ V T + G +K EL + +
Sbjct: 2 EKKKVVLAFSGGLDTSFCVKYLSEEKGYDVYTAIANTGGFSKEELANIEKRAVALGAVRH 61
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + + + GDI + + + IF A
Sbjct: 62 ATLDIEQEYYEKSIKYMVFGDILRN---GTYPISVSSER-----------IFQAIAIIEY 107
Query: 123 AYRLGITNIVIG 134
A +G + G
Sbjct: 108 AKSIGADCVAHG 119
>gi|307730812|ref|YP_003908036.1| argininosuccinate synthase [Burkholderia sp. CCGE1003]
gi|307585347|gb|ADN58745.1| argininosuccinate synthase [Burkholderia sp. CCGE1003]
Length = 408
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D +D V T + D GQ ++E R + ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELE-PARKKALQLGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 60 ENIFIEDLREEFVRD 74
>gi|240104200|ref|YP_002960509.1| Asparagine synthetase related protein [Thermococcus gammatolerans
EJ3]
gi|239911754|gb|ACS34645.1| Asparagine synthetase related protein [Thermococcus gammatolerans
EJ3]
Length = 528
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 22/125 (17%)
Query: 9 PSALLLFSGGQDS---STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV--EL 63
S ++ SGG DS T L R V + YG+R+ E+ V KK+
Sbjct: 199 RSVVVPLSGGYDSRFIVTSL---KQRGVDVICYT--YGRRDSPEVSVAKEVSKKLGCEWH 253
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD----------NNLP--NTFVPGR 111
++ +++ ++ +L + + + +QD +P + VPG
Sbjct: 254 FVEYNNAIIDESVLRSREFEEFFKYAFNFVSTIHLQDFFAIKYLSENKAIPRDSVIVPGH 313
Query: 112 NIIFL 116
+ FL
Sbjct: 314 SGDFL 318
>gi|183219514|ref|YP_001837510.1| argininosuccinate synthase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909656|ref|YP_001961211.1| argininosuccinate synthase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|229889878|sp|B0S9J6|ASSY_LEPBA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|229889879|sp|B0SJR2|ASSY_LEPBP RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|167774332|gb|ABZ92633.1| Argininosuccinate synthase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777936|gb|ABZ96234.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 402
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK 47
K AP ++L +SGG D+S L+W D + V D GQ+ +
Sbjct: 4 KPAPKKIVLAYSGGLDTSVILAWLKDTYGCEVIAFCADVGQKEE 47
>gi|149376768|ref|ZP_01894525.1| Argininosuccinate synthase [Marinobacter algicola DG893]
gi|149358889|gb|EDM47356.1| Argininosuccinate synthase [Marinobacter algicola DG893]
Length = 403
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W D ++ V T + D GQ +VE + E+
Sbjct: 1 MSDIKKVVLAYSGGLDTSVIVRWLQDTYECEVVTFTADIGQGEEVEPARAKAKALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 YIEDLREEFVRDYVFPMFRANTIYEGEYLLGTSIA 95
>gi|94311890|ref|YP_585100.1| tRNA-specific 2-thiouridylase MnmA [Cupriavidus metallidurans
CH34]
gi|205816893|sp|Q1LJ45|MNMA_RALME RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|93355742|gb|ABF09831.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cupriavidus metallidurans CH34]
Length = 359
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 4 KRVVVGLSGGVDSSVTAWLLKQQGYEVIGL 33
>gi|332159562|ref|YP_004424841.1| GMP synthase subunit B [Pyrococcus sp. NA2]
gi|331035025|gb|AEC52837.1| GMP synthase subunit B [Pyrococcus sp. NA2]
Length = 308
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYG 43
A++ SGG DSST A DR+ + + G
Sbjct: 20 NSKAIIALSGGVDSSTAAVLAYKAIGDRLHAVFVNTG 56
>gi|327405404|ref|YP_004346242.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fluviicola taffensis DSM 16823]
gi|327320912|gb|AEA45404.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fluviicola taffensis DSM 16823]
Length = 392
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 10/30 (33%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS V L
Sbjct: 2 KRVVVGLSGGVDSSVTAHLLQQEGYEVIGL 31
>gi|83647669|ref|YP_436104.1| argininosuccinate synthase [Hahella chejuensis KCTC 2396]
gi|119361279|sp|Q2SCE5|ASSY_HAHCH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|83635712|gb|ABC31679.1| argininosuccinate synthase [Hahella chejuensis KCTC 2396]
Length = 404
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S + W + +D V T + D GQ +VE + + ++
Sbjct: 1 MSKVNKVVLAYSGGLDTSVIVKWLQENYDCEVVTFTADIGQGEEVEPARAKAEKLGVKQI 60
Query: 64 M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D + P+ I ++
Sbjct: 61 FIEDLREEFARDFVFPMFRANTIYEGEYLLGTSIA 95
>gi|304396663|ref|ZP_07378544.1| tRNA(Ile)-lysidine synthetase [Pantoea sp. aB]
gi|304356172|gb|EFM20538.1| tRNA(Ile)-lysidine synthetase [Pantoea sp. aB]
Length = 439
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 11/95 (11%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSW---ALDRFDRVE--TLSFDYGQRNKVELECRLCV 56
D + + +AL++ FSGG DS+ L + L + C
Sbjct: 7 DAMLQPDAALVVAFSGGLDSTVLLHQLRGWQQQHPESHLRALHV-----HHGLSPNADCW 61
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLT 91
+ + +W+ H+ I ++ T
Sbjct: 62 AAHCLSVCEQWQLPCEVLHVTVDGRENGIEAAART 96
>gi|297270049|ref|XP_001106949.2| PREDICTED: argininosuccinate synthase-like [Macaca mulatta]
Length = 533
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
D + S +L +SGG D+S L W ++ V
Sbjct: 75 DTMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIA 109
>gi|229543733|ref|ZP_04432793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus coagulans 36D1]
gi|229328153|gb|EEN93828.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus coagulans 36D1]
Length = 371
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETL 38
++KAP ++ SGG DSS + V +
Sbjct: 1 MQKAPKDTRVVVGMSGGVDSSVAAYLLKQQGYDVIGI 37
>gi|218128478|ref|ZP_03457282.1| hypothetical protein BACEGG_00048 [Bacteroides eggerthii DSM
20697]
gi|317475697|ref|ZP_07934957.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
gi|217989369|gb|EEC55682.1| hypothetical protein BACEGG_00048 [Bacteroides eggerthii DSM
20697]
gi|316908153|gb|EFV29847.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
Length = 362
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 3 DIIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLS 39
D+ K L+ SGG DS+ TCL ++ + L+
Sbjct: 5 DMNKAEKRVLVGMSGGIDSTATCL-MLREQGYEIVGLT 41
>gi|195580620|ref|XP_002080133.1| GD21646 [Drosophila simulans]
gi|194192142|gb|EDX05718.1| GD21646 [Drosophila simulans]
Length = 677
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
LLL SGG DSS C + ++ + D G +RKK E +
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPHQIIAVHVDNG-----------FMRKKESEKVE 276
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK 92
+ +G D I+ + ++ K
Sbjct: 277 RSLRDIGIDLIVRKEGYTFLKGTTQVK 303
>gi|195352054|ref|XP_002042530.1| GM23268 [Drosophila sechellia]
gi|194124399|gb|EDW46442.1| GM23268 [Drosophila sechellia]
Length = 677
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
LLL SGG DSS C + ++ + D G +RKK E +
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPDQIIAVHVDNG-----------FMRKKESEKVE 276
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK 92
+ +G D I+ + ++ K
Sbjct: 277 RSLRDIGIDLIVRKEGYTFLKGTTQVK 303
>gi|187778511|ref|ZP_02994984.1| hypothetical protein CLOSPO_02106 [Clostridium sporogenes ATCC
15579]
gi|187772136|gb|EDU35938.1| hypothetical protein CLOSPO_02106 [Clostridium sporogenes ATCC
15579]
Length = 353
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K AL SGG DSS +R V + D R++ E C + +
Sbjct: 1 MSKGTVALA-MSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSASEDARRVA 58
Query: 65 PKWKDSLGEDHILPL 79
K H++ +
Sbjct: 59 EKLNIPF---HVINI 70
>gi|209542792|ref|YP_002275021.1| tRNA-specific 2-thiouridylase MnmA [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530469|gb|ACI50406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 361
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 34/123 (27%), Gaps = 5/123 (4%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ SGG DSS + + V + Y R + C + I +
Sbjct: 5 VAMSGGVDSSVVAARLVAEGHEVVGATLQLYDSRESA-RKGACCAGRDIHDARRVADRLG 63
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+++ S+ + A P V + +A LG +
Sbjct: 64 IPHYVID---AETRFRQSVIETFADAYAGGETPVPCVACNQGVKFTDLLGMARDLGAEAM 120
Query: 132 VIG 134
G
Sbjct: 121 ATG 123
>gi|281365319|ref|NP_620114.3| burgundy [Drosophila melanogaster]
gi|21428562|gb|AAM49941.1| LD42771p [Drosophila melanogaster]
gi|272407126|gb|AAF53975.3| burgundy [Drosophila melanogaster]
Length = 683
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
LLL SGG DSS C + ++ + D G +RKK E +
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPHQIIAVHVDNG-----------FMRKKESEKVE 276
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK 92
+ +G D I+ + ++ K
Sbjct: 277 RSLRDIGIDLIVRKEGYTFLKGTTQVK 303
>gi|18461323|gb|AAL71891.1|AF015270_1 GMP synthetase [Drosophila melanogaster]
Length = 720
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
LLL SGG DSS C + ++ + D G +RKK E +
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPHQIIAVHVDNG-----------FMRKKESEKVE 276
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK 92
+ +G D I+ + ++ K
Sbjct: 277 RSLRDIGIDLIVRKEGYTFLKGTTQVK 303
>gi|260889735|ref|ZP_05900998.1| tRNA methyl transferase [Leptotrichia hofstadii F0254]
gi|260860341|gb|EEX74841.1| tRNA methyl transferase [Leptotrichia hofstadii F0254]
Length = 229
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 1 MN--DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN +I+++ +L SGG DSS ++ V +
Sbjct: 1 MNRENIVERRKKVVLGMSGGVDSSVAAILLKEQGYDVIGV 40
>gi|114799175|ref|YP_762162.1| argininosuccinate synthase [Hyphomonas neptunium ATCC 15444]
gi|119361281|sp|Q0BWI1|ASSY_HYPNA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|114739349|gb|ABI77474.1| argininosuccinate synthase [Hyphomonas neptunium ATCC 15444]
Length = 413
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
M++ +L +SGG D+S L W V T + D GQ ++E + +
Sbjct: 1 MSNAASAPKKVVLAYSGGLDTSIILKWLQVEFGCEVVTFTADLGQGEELEPARKKALAAG 60
Query: 60 I 60
+
Sbjct: 61 V 61
>gi|114777820|ref|ZP_01452751.1| hypothetical protein SPV1_00190 [Mariprofundus ferrooxydans PV-1]
gi|114551811|gb|EAU54351.1| hypothetical protein SPV1_00190 [Mariprofundus ferrooxydans PV-1]
Length = 392
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 6/79 (7%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I + ++LFSGG DS + R V + Y + + +++
Sbjct: 173 PIGSSGRGVVLFSGGIDSPVAAYSMMKRGMEVVLVHL-YNSTINRDFAKIRDLARQLSLY 231
Query: 64 MPKWKDSLGEDHILPLAIL 82
+ H++ L
Sbjct: 232 QGRLTL-----HMIDLEEF 245
>gi|297518659|ref|ZP_06937045.1| thiamine biosynthesis protein ThiI [Escherichia coli OP50]
Length = 482
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 56/192 (29%), Gaps = 25/192 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R V F+ G E+ R
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCCVHYCFFNLGG-AAHEIGVRQVAHY----- 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
W + +AI + + + + L + + A+ +A
Sbjct: 227 --LWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKR--------MMVRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + S + PL+ K L
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHIINL 327
Query: 184 AQDIGGQDLVNL 195
A+ IG +D
Sbjct: 328 ARQIGTEDFART 339
>gi|253680929|ref|ZP_04861732.1| argininosuccinate synthase [Clostridium botulinum D str. 1873]
gi|253562778|gb|EES92224.1| argininosuccinate synthase [Clostridium botulinum D str. 1873]
Length = 327
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DY--GQRNKVELECRLCVRKKIVELMPK 66
AL L SGG DS D+ V + F Y G N + ++ + ++++ +
Sbjct: 3 KALALISGGLDSILAAKLIKDQGIEVIGICFKSYFFGPENAKRMTKQIDIPLEVIDFSKE 62
Query: 67 WKD 69
D
Sbjct: 63 HFD 65
>gi|150015222|ref|YP_001307476.1| GMP synthase [Clostridium beijerinckii NCIMB 8052]
gi|259647752|sp|A6LQ90|GUAA_CLOB8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|149901687|gb|ABR32520.1| GMP synthase, large subunit [Clostridium beijerinckii NCIMB 8052]
Length = 510
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 63/193 (32%), Gaps = 34/193 (17%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L SGG DSS + + D+G K E + V KK ++ K
Sbjct: 216 KKVLCALSGGVDSSVAAMIVHKAIGHNLTCIFVDHGLLRKDEGDTVERVFKKEFDMNIKR 275
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + LG ++ S + I + F+ A ++G
Sbjct: 276 VN-------VADRFLGKLAGVSDPETKRKIIGEE-------------FIRVFEEEAKKVG 315
Query: 128 -ITNIVIGVCETDYSGYPDC------RHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
I +V G + YPD TI++ L + + PL L K E
Sbjct: 316 QIDYLVQG------TIYPDIVESGTKTSATIKSHHNVGGLPEDMQFELIEPLRELFKDEV 369
Query: 181 WKLAQDIGGQDLV 193
+ +++G +
Sbjct: 370 RAVGEELGIPHKL 382
>gi|325285735|ref|YP_004261525.1| Argininosuccinate synthase [Cellulophaga lytica DSM 7489]
gi|324321189|gb|ADY28654.1| Argininosuccinate synthase [Cellulophaga lytica DSM 7489]
Length = 394
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 12 LLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L +SGG D+S C + D+ V +S + G K E+ ++KK +EL S
Sbjct: 5 VLAYSGGLDTSYCAKYLSKDKGFEVHAVSVNTGGFTKQEIS---NIKKKAIELGASSYTS 61
Query: 71 LGE 73
+
Sbjct: 62 IDA 64
>gi|262306055|gb|ACY45620.1| gln amidotransferase [Idiogaryops pumilis]
Length = 196
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK- 66
L+L SGG DS+ C + R D+V + D G +RK +L+ K
Sbjct: 45 KVLMLLSGGVDSTVCTALLGSALRKDQVIAIHIDNG-----------FMRKNESKLVEKS 93
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD 100
+ +G+ H++ I+ S+ T V + +D
Sbjct: 94 LSEVVGQLHVIN----AAITFSTATTTVPIDRKD 123
>gi|261403487|ref|YP_003247711.1| GMP synthase, large subunit [Methanocaldococcus vulcanius M7]
gi|261370480|gb|ACX73229.1| GMP synthase, large subunit [Methanocaldococcus vulcanius M7]
Length = 310
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 68/191 (35%), Gaps = 32/191 (16%)
Query: 9 PSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+A++ SGG DSS D++ + D G K E E E+ +
Sbjct: 22 RNAIIALSGGVDSSVAAVLTHKAIGDKLTAVFVDTGLMRKGEKE----------EVEKTF 71
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
K+ L + I+ A ++ K+ K + +F+ +A ++
Sbjct: 72 KEKLEMNLIIVDAKDRFLNALKGVKDPEEKRKIIGK----------LFIDVFEEIAEKIK 121
Query: 128 ITNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+V G PD R + A+ GM + V PL L K E LA
Sbjct: 122 AEVLVQGTIA------PDWIETRGNIKSHHNVALPHGMV--LEVVEPLRELYKDEVRILA 173
Query: 185 QDIGGQDLVNL 195
+++G D +
Sbjct: 174 RELGLPDSIVY 184
>gi|226226536|ref|YP_002760642.1| tRNA-specific 2-thiouridylase MnmA [Gemmatimonas aurantiaca T-27]
gi|226089727|dbj|BAH38172.1| tRNA-specific 2-thiouridylase MnmA [Gemmatimonas aurantiaca T-27]
Length = 381
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 15/140 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + K L+ SGG DSS + ++ V ++ + ++ R C
Sbjct: 1 MAGLPPKGARVLVAMSGGVDSSVAAAILMEHGCDVVGVTMKLHG-DGADVPDRPCCSLDA 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNII 114
+ + LG H + L D + + + P NTF R+++
Sbjct: 60 TSDARRVCEKLGIPHYV--TNLVDHFSHDVLDDFVQEYARGRTPIPCVRCNTFTKFRDLL 117
Query: 115 FLVFAATLAYRLGITNIVIG 134
A + + G
Sbjct: 118 ------HKADAIDAPWLATG 131
>gi|222099463|ref|YP_002534031.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
gi|221571853|gb|ACM22665.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
Length = 327
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 18/140 (12%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ ++ L+ SGG+DS + V+ L G R + +K E
Sbjct: 65 KMFRRDSKILIAVSGGKDSVSLWHMLKKLGYEVDALFIRAG---------RSGMVQKAQE 115
Query: 63 LMPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ K + LG HI+ + S+ ++ ++ ++ R +
Sbjct: 116 IVEKNAELLGTKLHIVDATEYFE-GLSTQEISIMLRRPVCSICGVV---RRYLM----NK 167
Query: 122 LAYRLGITNIVIGVCETDYS 141
AY G +V G D +
Sbjct: 168 FAYENGYDVVVTGHNLNDEA 187
>gi|167044130|gb|ABZ08813.1| putative PP-loop family protein [uncultured marine crenarchaeote
HF4000_APKG5C13]
Length = 267
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
S L+ SGG DS+ A + ++ DY + ELE + +I
Sbjct: 15 KNSILVALSGGVDSALVAYSAYTKLGKSAIAVTADYKTLAQEELEYAKKISSEI 68
>gi|42526204|ref|NP_971302.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Treponema denticola ATCC 35405]
gi|81570437|sp|Q73PV6|MNMA_TREDE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|41816316|gb|AAS11183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Treponema denticola ATCC 35405]
Length = 366
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 12/99 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI---VELMPK 66
L+ SGG DS+ +D+ V ++ L + K+ +E K
Sbjct: 2 KVLVGLSGGVDSAVAAKLLIDQGYDVTGVTM-------QLLPKLSGIYKEQTDDIEDAKK 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
D LG HI+ + + + + + + PN
Sbjct: 55 VADKLGIKHIV--YDMRETFKTEIIDYFVEEYKQGRTPN 91
>gi|325958352|ref|YP_004289818.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methanobacterium sp. AL-21]
gi|325329784|gb|ADZ08846.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methanobacterium sp. AL-21]
Length = 363
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
++K A++ SGG DSS L A ++ D
Sbjct: 162 MEKDHKAIVALSGGVDSSFSLIVAKLLGFNPVAVTVD 198
>gi|301309867|ref|ZP_07215806.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 20_3]
gi|300831441|gb|EFK62072.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 20_3]
Length = 438
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 24/137 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ + L+ SGG DS L + L ++ R + E + + E
Sbjct: 14 LLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGE-ESDRDEAFACEFAES 72
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV-PGRNIIFLVFAATL 122
+ + D I + K++++++ L + R
Sbjct: 73 LEVPFHKIDFDTI----------SYAGEKHLSIEMAARELRYAWFEEMR----------- 111
Query: 123 AYRLGITNIVIGVCETD 139
RLG I + D
Sbjct: 112 -ERLGGQAIAVAHHRDD 127
>gi|262306063|gb|ACY45624.1| gln amidotransferase [Libinia emarginata]
Length = 194
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG-QRNKVELECRLCVRK 58
+ L+L SGG DS+ C + AL ++V + D G R L+ +R+
Sbjct: 39 SNKVLMLVSGGVDSTVCAALLHKALAE-EQVIAVHIDNGFMRKNESLQVEQSLRR 92
>gi|289805002|ref|ZP_06535631.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 270
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 29/183 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DSS + R RV F+ G +I
Sbjct: 115 PIGTQEDVLSLISGGFDSSVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 163
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 164 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 216
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A R G+ +V G S + + + S + PL+ K
Sbjct: 217 VAERYGVQALVTGEALGQVSS---------QTLTNLRLIDNVSDTLILRPLISYDKEHII 267
Query: 182 KLA 184
LA
Sbjct: 268 NLA 270
>gi|198274479|ref|ZP_03207011.1| hypothetical protein BACPLE_00627 [Bacteroides plebeius DSM
17135]
gi|198272681|gb|EDY96950.1| hypothetical protein BACPLE_00627 [Bacteroides plebeius DSM
17135]
Length = 349
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 11/74 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVEL 63
+K+ LL SGG DSS D V ++F Y + +E ++
Sbjct: 1 MKENNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKDGNIEY----------LDD 50
Query: 64 MPKWKDSLGEDHIL 77
+LG H++
Sbjct: 51 ARDLCRTLGIPHLI 64
>gi|157875044|ref|XP_001685929.1| thiamine biosynthesis-like protein [Leishmania major]
gi|68129002|emb|CAJ06434.1| thiamine biosynthesis-like protein [Leishmania major strain
Friedlin]
Length = 795
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 36/125 (28%), Gaps = 28/125 (22%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R V + F + + + ++I E
Sbjct: 219 PITPDQRVLALISGGIDSPVAAYRMMTRGCLVSGVHFL---NSTNDTASVVEKNRRICER 275
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNII----FLV 117
+ + ++ + I + VP R +I L
Sbjct: 276 LSSLQGRFNMHYVDISTLQSQIVAN-------------------VPNHNRTLIYKWFMLS 316
Query: 118 FAATL 122
AA+
Sbjct: 317 LAASF 321
>gi|52550452|gb|AAU84301.1| argininosuccinate synthase [uncultured archaeon GZfos9D1]
Length = 388
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQ-----RNKVELECRLCVRKKIV 61
+L +SGG D+S C+ + +D V ++ D GQ + E +LC + +
Sbjct: 2 KKVVLAYSGGLDTSVCIPLLKEHYGYDNVIAVTVDVGQPEDDIKEAKERGAKLCDSYREI 61
Query: 62 ELMPKW 67
+ ++
Sbjct: 62 DAKEEF 67
>gi|330891825|gb|EGH24486.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. mori str.
301020]
Length = 255
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMPKWK 68
L+L SGG DS+ + R F+ G R EL E + KK
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH-ELGVMEVAHFIWKKYGSSQRVLF 241
Query: 69 DSLGEDHIL 77
S+ + +L
Sbjct: 242 VSVPFEEVL 250
>gi|293364049|ref|ZP_06610785.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma alligatoris A21JP2]
gi|292552539|gb|EFF41313.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma alligatoris A21JP2]
Length = 372
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KKRVVIGMSGGVDSSVAAYLLKEQGYEVVGL 33
>gi|262305997|gb|ACY45591.1| gln amidotransferase [Acanthocyclops vernalis]
Length = 197
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L+L SGG DS+ C + DRV + D G
Sbjct: 45 KVLMLLSGGVDSTVCAALMNRALGVDRVLAIHIDNG 80
>gi|256811268|ref|YP_003128637.1| Queuosine synthesis-like protein [Methanocaldococcus fervens
AG86]
gi|256794468|gb|ACV25137.1| Queuosine synthesis-like protein [Methanocaldococcus fervens
AG86]
Length = 260
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
I K P A++ FSGG DSST A + V+ +S
Sbjct: 59 IDKKPDAVVAFSGGVDSSTSTIIAK-QIFNVKAVS 92
>gi|254457550|ref|ZP_05070978.1| thiamine biosynthesis protein:ExsB [Campylobacterales bacterium
GD 1]
gi|207086342|gb|EDZ63626.1| thiamine biosynthesis protein:ExsB [Campylobacterales bacterium
GD 1]
Length = 325
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A+ LFSGG DS+ + +D+ V ++ G
Sbjct: 2 KAIALFSGGLDSTLAMKLIIDQGIDVLAVNISTG 35
>gi|157693335|ref|YP_001487797.1| argininosuccinate synthase [Bacillus pumilus SAFR-032]
gi|194017201|ref|ZP_03055813.1| argininosuccinate synthase [Bacillus pumilus ATCC 7061]
gi|166989388|sp|A8FG70|ASSY_BACP2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|157682093|gb|ABV63237.1| argininosuccinate synthase [Bacillus pumilus SAFR-032]
gi|194011069|gb|EDW20639.1| argininosuccinate synthase [Bacillus pumilus ATCC 7061]
Length = 403
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W ++ V D G
Sbjct: 1 MSQNKKVVLAYSGGLDTSVAVKWLQEQGYEVVACCLDVG 39
>gi|55822387|ref|YP_140828.1| thiamine biosynthesis protein ThiI [Streptococcus thermophilus
CNRZ1066]
gi|55738372|gb|AAV62013.1| thiamine biosynthesis protein [Streptococcus thermophilus CNRZ1066]
Length = 407
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A +L+ SGG DS AL R +E + F KK +L
Sbjct: 175 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDL 228
Query: 64 MPKWKDSLGEDHILPLAI 81
K G H + +
Sbjct: 229 TRKLTKFGGNIHFIEVPF 246
>gi|332971469|gb|EGK10422.1| argininosuccinate synthase [Psychrobacter sp. 1501(2011)]
Length = 410
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 2/99 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M+ K +L +SGG D+S W D +D V T + D GQ +VE
Sbjct: 1 MSIEKDKINKIVLAYSGGLDTSIIAKWLQDTYDAEVITFTADIGQGEEVEPARAKAEAMG 60
Query: 60 IVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
I + + + D++ P+ I ++
Sbjct: 61 IKHIHIEDLRAEFARDYVFPMFRANAIYEGEYLLGTSIA 99
>gi|331270460|ref|YP_004396952.1| hypothetical protein CbC4_2290 [Clostridium botulinum BKT015925]
gi|329127010|gb|AEB76955.1| conserved hypothetical protein [Clostridium botulinum BKT015925]
Length = 327
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DY--GQRNKVELECRLCVRKKIVELMPK 66
AL L SGG DS D+ V + F Y G N + ++ + ++V+ +
Sbjct: 3 KALALISGGLDSILAAKLIKDQGIEVIGICFKSYFFGPDNAKRMTKQIDIPLEVVDFSKE 62
Query: 67 WKD 69
D
Sbjct: 63 HFD 65
>gi|315179841|gb|ADT86755.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio furnissii NCTC 11218]
Length = 372
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKKI 60
N ++ SGG DSS + +VE L +N E + C +
Sbjct: 4 NRNANSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNEEYCTAAED 59
Query: 61 VELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 60 LADAQAVCDKLGIHLHTINFA 80
>gi|301162414|emb|CBW21959.1| putative ATP-binding PP-loop protein [Bacteroides fragilis 638R]
Length = 435
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 41/184 (22%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DS L L E ++ R E + +++
Sbjct: 19 NDKVLVTLSGGTDSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCH----- 72
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E +L D + + K++++++ L + TL +
Sbjct: 73 -----ESGVLLHIEHFDTTQYAAKKHISIEMAARELRYEWFE-----------TLRRQRE 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
+ I + D + + + G + + PL+ L +
Sbjct: 117 ASVIATAHHKDDS----------VETVLLNLIRGTGINGLLGIRPRNGNIVRPLLCLSRE 166
Query: 179 ETWK 182
E
Sbjct: 167 EIIA 170
>gi|296315198|ref|ZP_06865139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria polysaccharea ATCC 43768]
gi|296837925|gb|EFH21863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria polysaccharea ATCC 43768]
Length = 367
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 40/139 (28%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTSDPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L A G I G
Sbjct: 114 LD----YAVVQGADTIATG 128
>gi|260768141|ref|ZP_05877075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio furnissii CIP 102972]
gi|260616171|gb|EEX41356.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio furnissii CIP 102972]
Length = 372
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKKI 60
N ++ SGG DSS + +VE L +N E + C +
Sbjct: 4 NRNANSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNEEYCTAAED 59
Query: 61 VELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 60 LADAQAVCDKLGIHLHTINFA 80
>gi|167042206|gb|ABZ06938.1| putative tRNA methyl transferase [uncultured marine crenarchaeote
HF4000_ANIW93I24]
Length = 268
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
S L+ SGG DS+ A + +++ DY + ELE + +I
Sbjct: 16 KNSVLVALSGGVDSALVAYSAYAKLGKSAISVTADYKTLAQEELEYAKKISLEI 69
>gi|332290675|ref|YP_004429284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Krokinobacter diaphorus 4H-3-7-5]
gi|332168761|gb|AEE18016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Krokinobacter diaphorus 4H-3-7-5]
Length = 397
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS ++ V L
Sbjct: 2 KTVVVGLSGGVDSSVTAHLLKEQGYNVIGL 31
>gi|71666942|ref|XP_820425.1| GMP synthase [Trypanosoma cruzi strain CL Brener]
gi|70885769|gb|EAN98574.1| GMP synthase, putative [Trypanosoma cruzi]
Length = 657
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
+ L L SGG DS+ C L +RV + D+G E E + ++
Sbjct: 220 QGQKVLCLASGGVDSTVCAVLLLKALGPERVVCVHIDHGFMRLRETEEVVAALRE 274
>gi|294055153|ref|YP_003548811.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Coraliomargarita akajimensis DSM 45221]
gi|293614486|gb|ADE54641.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Coraliomargarita akajimensis DSM 45221]
Length = 356
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN--KVELECRLCVRKKIVELMPK 66
L+ SGG DS+ ++ +S Y R E C ++ +E
Sbjct: 2 QKVLVALSGGVDSAVAALLLKEQGY---AVSGAY-IRTWMNEEAPLADCPAQQDIEDSRA 57
Query: 67 WKDSLGEDHIL 77
LG D+ +
Sbjct: 58 VAQHLGIDYEI 68
>gi|289192958|ref|YP_003458899.1| hypothetical protein MFS40622_1490 [Methanocaldococcus sp.
FS406-22]
gi|288939408|gb|ADC70163.1| conserved hypothetical protein [Methanocaldococcus sp. FS406-22]
Length = 197
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+LFSGG+DSS + ++ ++G
Sbjct: 5 VLFSGGKDSSLSAAILKKLGYSPHLITINFG 35
>gi|265762798|ref|ZP_06091366.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 2_1_16]
gi|263255406|gb|EEZ26752.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 2_1_16]
Length = 435
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 41/184 (22%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DS L L E ++ R E + +++
Sbjct: 19 NDKVLVTLSGGADSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCH----- 72
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E +L D + + K++++++ L + TL +
Sbjct: 73 -----ESGVLLHIEHFDTTQYAAKKHISIEMAARELRYEWFE-----------TLRRQRE 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
+ I + D + + + G + + PL+ L +
Sbjct: 117 ASVIATAHHKDDS----------VETVLLNLIRGTGINGLLGIRPRNGNIVRPLLCLSRE 166
Query: 179 ETWK 182
E
Sbjct: 167 EIIA 170
>gi|253563316|ref|ZP_04840773.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_2_5]
gi|251947092|gb|EES87374.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_2_5]
Length = 435
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 41/184 (22%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DS L L E ++ R E + +++
Sbjct: 19 NDKVLVTLSGGADSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCH----- 72
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E +L D + + K++++++ L + TL +
Sbjct: 73 -----ESGVLLHIEHFDTTQYAAKKHISIEMAARELRYEWFE-----------TLRRQRE 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
+ I + D + + + G + + PL+ L +
Sbjct: 117 ASVIATAHHKDDS----------VETVLLNLIRGTGINGLLGIRPRNGNIVRPLLCLSRE 166
Query: 179 ETWK 182
E
Sbjct: 167 EIIA 170
>gi|257051513|ref|YP_003129346.1| GMP synthase subunit B [Halorhabdus utahensis DSM 12940]
gi|256690276|gb|ACV10613.1| GMP synthase, large subunit [Halorhabdus utahensis DSM 12940]
Length = 305
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 36/184 (19%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSST + A D D++ + D G +RK E + +
Sbjct: 23 KAVIALSGGVDSSTAAALAYDAIGDQLTPVYVDTG-----------LMRKGETEQIRETF 71
Query: 69 DSLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D + I+ L ++ + + I + F+ T+A +
Sbjct: 72 DYMDSLRIVDATDRFLDELEGVTDPEEKRHAIGEQ-------------FIREFETVAREV 118
Query: 127 GITNIVIGVCETDYSGYPD--CRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKL 183
+V G + YPD TI++ L + P+ L K E ++
Sbjct: 119 DADYLVQG------TIYPDRIESEGTIKSHHNVGGLPDVVDFDGIVEPMRDLYKDEVREV 172
Query: 184 AQDI 187
A+++
Sbjct: 173 AREL 176
>gi|60680868|ref|YP_211012.1| putative ATP-binding PP-loop protein [Bacteroides fragilis NCTC
9343]
gi|60492302|emb|CAH07067.1| putative ATP-binding PP-loop protein [Bacteroides fragilis NCTC
9343]
Length = 435
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 41/184 (22%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DS L L E ++ R E + +++
Sbjct: 19 NDKVLVTLSGGADSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCH----- 72
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
E +L D + + K++++++ L + TL +
Sbjct: 73 -----ESGVLLHIEHFDTTQYAAKKHISIEMAARELRYEWFE-----------TLRRQRE 116
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
+ I + D + + + G + + PL+ L +
Sbjct: 117 ASVIATAHHKDDS----------VETVLLNLIRGTGINGLLGIRPRNGNIVRPLLCLSRE 166
Query: 179 ETWK 182
E
Sbjct: 167 EIIA 170
>gi|332529592|ref|ZP_08405548.1| tRNA-specific 2-thiouridylase MnmA [Hylemonella gracilis ATCC
19624]
gi|332040942|gb|EGI77312.1| tRNA-specific 2-thiouridylase MnmA [Hylemonella gracilis ATCC
19624]
Length = 386
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 13/36 (36%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
D + ++ SGG DS+ + V +
Sbjct: 2 DKSNRGQRVVVGLSGGVDSAVTAYLLKKQGHDVVGI 37
>gi|269792364|ref|YP_003317268.1| argininosuccinate synthase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099999|gb|ACZ18986.1| argininosuccinate synthase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 410
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 62/224 (27%), Gaps = 45/224 (20%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +L +SGG D+S + W ++ V T + D GQ ++ K I
Sbjct: 1 MTYKGKLVLAYSGGLDTSVAIPWLKEQGYEVITFTADVGQ----PIDLEGTKAKAIKSGA 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
K + + + + + +++ + + P + +A
Sbjct: 57 SKAYIADLREEFVEEFVWRSLKANAMYQGTYPLNSALSRP---------LIASHLVKVAE 107
Query: 125 RLGITNIVIGVCETDYSGYPDCR---------HDTIRAIETAINLGMESHVTVHTPLMWL 175
G I G C +A+ + V P+
Sbjct: 108 EEGAVAIAHG-----------CTGKGQDQVRIEVCAKALN--------PDIVVEAPVRDW 148
Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
+ ++I + + + + + + + C
Sbjct: 149 H----FSRDEEIEYAEKHGIPIPVTKSSPYSIDENLWGRSIECG 188
>gi|256383786|gb|ACU78356.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
mycoides subsp. capri str. GM12]
gi|256384616|gb|ACU79185.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
mycoides subsp. capri str. GM12]
gi|296455645|gb|ADH21880.1| thiamine biosynthesis/tRNA modification protein ThiI [synthetic
Mycoplasma mycoides JCVI-syn1.0]
Length = 395
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVEL 63
+ L L SGG DS L R +V+ + F L+ + KKI +
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHFMTPPHTSYQALDKVFNLAKKIAKY 231
>gi|254506120|ref|ZP_05118264.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus 16]
gi|219550938|gb|EED27919.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio parahaemolyticus 16]
Length = 374
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|209695634|ref|YP_002263563.1| tRNA-specific 2-thiouridylase MnmA [Aliivibrio salmonicida
LFI1238]
gi|208009586|emb|CAQ79882.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Aliivibrio salmonicida LFI1238]
Length = 374
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|197336343|ref|YP_002156606.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio fischeri MJ11]
gi|229487426|sp|B5FG83|MNMA_VIBFM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|197317833|gb|ACH67280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio fischeri MJ11]
Length = 374
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|157107049|ref|XP_001649600.1| argininosuccinate synthase [Aedes aegypti]
gi|122115039|sp|Q0IFL5|ASSY_AEDAE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|108879663|gb|EAT43888.1| argininosuccinate synthase [Aedes aegypti]
Length = 412
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ LL +SGG D+S L W L++ V D GQ E + R+K + +
Sbjct: 1 MSGKEKILLAYSGGLDTSCILKWLLEKGYEVICFMADVGQ-----EEDFVAAREKALRVG 55
Query: 65 PK 66
K
Sbjct: 56 AK 57
>gi|83312118|ref|YP_422382.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Magnetospirillum magneticum AMB-1]
gi|123541366|sp|Q2W2V2|MNMA_MAGMM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|82946959|dbj|BAE51823.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Magnetospirillum magneticum AMB-1]
Length = 373
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 43/138 (31%), Gaps = 17/138 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECR----LCVRKKIV 61
+ ++ SGG DSS + ++ V ++ Y C K +
Sbjct: 11 SSTRVVVAMSGGVDSSAVAALLKEQGYDVVGVTLQLYDLATSGIEPGACRPNTCCAGKDI 70
Query: 62 ELMPKWKDSLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFL 116
D+LG H +L + + + A + P VP R + F
Sbjct: 71 HDARAVADALGIPHYVLD---FEETFRRDVVERFAQTYLEARTP---VPCIECNRTVKFR 124
Query: 117 VFAATLAYRLGITNIVIG 134
+A LG + G
Sbjct: 125 DL-LGVAKDLGGDALATG 141
>gi|59712391|ref|YP_205167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio fischeri ES114]
gi|71658019|sp|Q5E3W7|MNMA_VIBF1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|59480492|gb|AAW86279.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio fischeri ES114]
Length = 374
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKK 59
M+D +K ++ SGG DSS + +VE L +N E + C +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDNEEYCTAAE 54
Query: 60 IVELMPKWKDSLGED-HILPLA 80
+ D LG H + A
Sbjct: 55 DLADAQAVCDKLGIHLHTINFA 76
>gi|325578410|ref|ZP_08148545.1| thiamine biosynthesis protein ThiI [Haemophilus parainfluenzae ATCC
33392]
gi|325160146|gb|EGC72275.1| thiamine biosynthesis protein ThiI [Haemophilus parainfluenzae ATCC
33392]
Length = 483
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 62/189 (32%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG------AAHEIGVKQMAYH 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + G + + K+ + + V R + + A+ +A
Sbjct: 227 IWSRYSSSHKVRFIAIPFEGVVG------EILEKVDNGQMG--VVLKR--MMVRGASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I IV G S + + + S V PL+ K + +
Sbjct: 277 QRFDIQAIVTGEALGQVSS---------QTLTNLRLIDEASDALVLRPLITHDKEQIIAM 327
Query: 184 AQDIGGQDL 192
A++IG D+
Sbjct: 328 AKEIGTDDI 336
>gi|322829891|gb|EFZ33128.1| GMP synthase, putative [Trypanosoma cruzi]
Length = 686
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
+ L L SGG DS+ C L +RV + D+G E E + ++
Sbjct: 249 QGQKVLCLASGGVDSTVCAVLLLKALGPERVVCVHIDHGFMRLRETEEVVAALRE 303
>gi|322494670|emb|CBZ29972.1| thiamine biosynthesis-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 795
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 36/125 (28%), Gaps = 28/125 (22%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R V + F + + + ++I E
Sbjct: 219 PITPDQRVLALISGGIDSPVAAYRMMTRGCLVNGVHFL---NSTNDTASVVEKNRRICER 275
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNII----FLV 117
+ + ++ + I + VP R +I L
Sbjct: 276 LSTVQGRFDMHYVDISTLQSQIVAN-------------------VPNHNRTLIYKWFMLS 316
Query: 118 FAATL 122
AA+
Sbjct: 317 LAASF 321
>gi|307107358|gb|EFN55601.1| hypothetical protein CHLNCDRAFT_52216 [Chlorella variabilis]
Length = 448
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+L +SGG D+S L W D +D V T + D GQ ++E + + E+
Sbjct: 43 KKVVLAYSGGLDTSVILKWLQDTYDCEVVTFTADLGQGEELEPARQKAEAAGVKEIY 99
>gi|257060381|ref|YP_003138269.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. PCC 8802]
gi|256590547|gb|ACV01434.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cyanothece sp. PCC 8802]
Length = 349
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + + V L+
Sbjct: 3 KVVVGLSGGVDSSVAAAVLHHQGYEVIGLT 32
>gi|46447434|ref|YP_008799.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase/
antisuppressor [Candidatus Protochlamydia amoebophila
UWE25]
gi|81626468|sp|Q6MA75|MNMA_PARUW RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|46401075|emb|CAF24524.1| probable tRNA
(5-methylaminomethyl-2-thiouridylate)-
methyltransferase/ Antisuppressor [Candidatus
Protochlamydia amoebophila UWE25]
Length = 376
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+K + ++ SGG DSS ++ V L
Sbjct: 1 MKNQKTVVVGMSGGVDSSVSALLMKEQGYNVIGL 34
>gi|331701129|ref|YP_004398088.1| argininosuccinate synthase [Lactobacillus buchneri NRRL B-30929]
gi|329128472|gb|AEB73025.1| Argininosuccinate synthase [Lactobacillus buchneri NRRL B-30929]
Length = 431
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S ++W D+ V + G
Sbjct: 1 MSENNKVILAYSGGLDTSVAIAWLKDKGYDVVACCINVG 39
>gi|296111878|ref|YP_003622260.1| argininosuccinate synthase [Leuconostoc kimchii IMSNU 11154]
gi|295833410|gb|ADG41291.1| argininosuccinate synthase [Leuconostoc kimchii IMSNU 11154]
Length = 408
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+L +SGG D+S + W D+ + + + GQ + ++E ++
Sbjct: 1 MTEKLVLAYSGGLDTSVAIPWLKDKGYDIIAVVLNVGQ-HGKDMEMIQAKALQVGASQSI 59
Query: 67 WKDSLGE 73
D+ E
Sbjct: 60 VIDAQAE 66
>gi|294894436|ref|XP_002774832.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239880503|gb|EER06648.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 468
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 18/110 (16%)
Query: 13 LLFSGGQDSSTCLSWALDRFDR-VETLS---------------FDYGQRNKVELECRLCV 56
+LFSGG DS+T + AL+ DR V+ L+ Y R E+ R V
Sbjct: 52 ILFSGGVDSTTLAALALEESDRQVDLLTASVDGEDSPDLRTALVSY--RRLAEVYGRARV 109
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT 106
R + + K L + L A S+ + K +A+ + ++ T
Sbjct: 110 RLILCGIDANDKGGLTRELRLIAARTRQESYFGMAKLIALHYRSSSPQQT 159
>gi|121606705|ref|YP_984034.1| tRNA-specific 2-thiouridylase MnmA [Polaromonas naphthalenivorans
CJ2]
gi|205816918|sp|A1VTY5|MNMA_POLNA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|120595674|gb|ABM39113.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Polaromonas naphthalenivorans CJ2]
Length = 394
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ K ++ SGG DS+ + V +
Sbjct: 1 MDKQHSK-QRIVVGLSGGVDSAVTAYLLKQQGHEVIGI 37
>gi|330718658|ref|ZP_08313258.1| argininosuccinate synthase [Leuconostoc fallax KCTC 3537]
Length = 417
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK 47
+L +SGG D+S + W ++ V + D GQ K
Sbjct: 9 MTEKLVLAYSGGLDTSVAIPWLKEKGYDVIAVVLDVGQHGK 49
>gi|302387623|ref|YP_003823445.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium saccharolyticum WM1]
gi|302198251|gb|ADL05822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium saccharolyticum WM1]
Length = 372
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + + KA ++ SGG DSS ++ V ++
Sbjct: 10 VRETMSKA-KVVVGMSGGVDSSVAAWLLKEQGYDVIGVT 47
>gi|255716424|ref|XP_002554493.1| KLTH0F06644p [Lachancea thermotolerans]
gi|238935876|emb|CAR24056.1| KLTH0F06644p [Lachancea thermotolerans]
Length = 418
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + L +SGG D+S L+W L+ V + GQ + + + I
Sbjct: 1 MSKGK--VCLAYSGGLDTSIILAWLLEEGYEVVAFMANVGQ--EEDFDAAEKKAMAIGA 55
>gi|298480486|ref|ZP_06998683.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. D22]
gi|298273307|gb|EFI14871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. D22]
Length = 379
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
+I++ LL SGG DSS L+ V ++F Y E LE + +++
Sbjct: 1 MIEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERL 59
>gi|262405518|ref|ZP_06082068.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
gi|294646343|ref|ZP_06723990.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides ovatus SD CC 2a]
gi|294806678|ref|ZP_06765509.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides xylanisolvens SD CC 1b]
gi|262356393|gb|EEZ05483.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
gi|292638298|gb|EFF56669.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides ovatus SD CC 2a]
gi|294446098|gb|EFG14734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides xylanisolvens SD CC 1b]
gi|295086173|emb|CBK67696.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides xylanisolvens XB1A]
Length = 379
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
+I++ LL SGG DSS L+ V ++F Y E LE + +++
Sbjct: 1 MIEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERL 59
>gi|218248292|ref|YP_002373663.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. PCC 8801]
gi|226704769|sp|B7K1G5|MNMA_CYAP8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|218168770|gb|ACK67507.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cyanothece sp. PCC 8801]
Length = 349
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + + V L+
Sbjct: 3 KVVVGLSGGVDSSVAAAVLHHQGYEVIGLT 32
>gi|118445022|ref|YP_879024.1| hypothetical protein NT01CX_0558 [Clostridium novyi NT]
gi|118135478|gb|ABK62522.1| conserved protein [Clostridium novyi NT]
Length = 327
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DY--GQRNKVELECRLCVRKKIVELMPK 66
AL L SGG DS D+ V + F Y G N + ++ + ++V+ +
Sbjct: 3 KALALISGGLDSILAAKLIKDQGIEVIGICFKSYFFGPENAKRMTKQIDIPLEVVDFSKE 62
Query: 67 WKD 69
D
Sbjct: 63 HFD 65
>gi|301167152|emb|CBW26731.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteriovorax marinus SJ]
Length = 382
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 58/204 (28%), Gaps = 46/204 (22%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ + ++ SGG DSS C + ++ V + + +
Sbjct: 13 NEETTVIVGMSGGVDSSVCAAVLKEQGYNVIGMFMK---------NWEEQDENGVCQSSK 63
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP------GRNI---IFL 116
++ D + L + NV D F P R I +FL
Sbjct: 64 EYADVISVCEKLDIPYYSVDFVKEYRDNVFQHFLDEYEAG-FTPNPDILCNREIKFKVFL 122
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------------LGMES 164
A LG + G Y C++ I + M+
Sbjct: 123 N----KALELGADYLATGH-------Y--CQNILIDGENHLVKGNDPGKDQTYFLYTMKK 169
Query: 165 HV--TVHTPLMWLKKYETWKLAQD 186
VH P+ L K E KLA+
Sbjct: 170 EKLEHVHFPIGHLPKTEVRKLAEK 193
>gi|299133122|ref|ZP_07026317.1| argininosuccinate synthase [Afipia sp. 1NLS2]
gi|298593259|gb|EFI53459.1| argininosuccinate synthase [Afipia sp. 1NLS2]
Length = 445
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
M+ I+K K + + FSGG D+S L W + RV + + GQ ++ + + +
Sbjct: 1 MSTILKNLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDA---IP 57
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLT 91
+K +E + + L + I +
Sbjct: 58 RKAMEFGAEKARLVDCRTQLVHEGIAAIQSGAFH 91
>gi|197294784|ref|YP_001799325.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Phytoplasma
australiense]
gi|226704773|sp|B1VAX7|MNMA_PHYAS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|171854111|emb|CAM12100.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Candidatus Phytoplasma australiense]
Length = 375
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ VE +
Sbjct: 2 KKVVVGLSGGVDSAVSALLLKKAGYEVEAV 31
>gi|14591232|ref|NP_143309.1| hypothetical protein PH1441 [Pyrococcus horikoshii OT3]
gi|3257865|dbj|BAA30548.1| 428aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 428
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K +A++ +SGG+DS+ L A FD V +
Sbjct: 230 KDKTAVVPWSGGKDSTATLILASKVFDEVTAV 261
>gi|291521316|emb|CBK79609.1| conserved hypothetical protein TIGR00268 [Coprococcus catus GD/7]
Length = 269
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 65/182 (35%), Gaps = 42/182 (23%)
Query: 13 LLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ FSGG DSS L A +V ++F+ K +L V K+ +
Sbjct: 21 VAFSGGVDSSVILRAACEAAAANGKKVYAVTFETKLHPKADLPQAQKVAKEAGAI----- 75
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
H++ + L + + + L ++ +N++ T A GI
Sbjct: 76 -----HHVIYVNEL------DNEEMLNNPVNRCYLCKKYL-FQNLL------TFAAEKGI 117
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL--KKYETWKLAQD 186
I+ G D Y R T + LG V +PL L K + ++A D
Sbjct: 118 DTIMEGNNADDLHIY---RPGT----QAVKELG------VLSPLAELGITKAQVREIAAD 164
Query: 187 IG 188
+G
Sbjct: 165 MG 166
>gi|260777128|ref|ZP_05886022.1| NAD synthetase [Vibrio coralliilyticus ATCC BAA-450]
gi|260606794|gb|EEX33068.1| NAD synthetase [Vibrio coralliilyticus ATCC BAA-450]
Length = 275
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 64/203 (31%), Gaps = 35/203 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDR-------FDRVETLSFDYG-QRNKVEL 50
+ + AL+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 31 KLQEARCKALVLGISGGVDSTTCGRLAQLAVNELNEETDGGYQFIAVRLPYGEQKDEDEA 90
Query: 51 ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
+ L + P S+ + + T+ + + + V
Sbjct: 91 QIALQF------IQPTHSVSVNIKAGVDGLHAASREALAHTELLPQQASKIDFVKGNVKA 144
Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
R A +A + V TD+S +
Sbjct: 145 R-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDLA 187
Query: 171 PLMWLKKYETWKLAQDIGGQDLV 193
PL L K + ++A +G +L+
Sbjct: 188 PLFGLSKRQVREVAATLGAPELL 210
>gi|302346698|ref|YP_003814996.1| tRNA(Ile)-lysidine synthetase [Prevotella melaninogenica ATCC
25845]
gi|302150433|gb|ADK96694.1| tRNA(Ile)-lysidine synthetase [Prevotella melaninogenica ATCC
25845]
Length = 456
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 24/130 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L + RVE + ++ R + L ++ + L
Sbjct: 22 LVALSGGADSVALLLCIKELGYRVEAVHCNFHLRGEESLRDE------------QFCEDL 69
Query: 72 GEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ +PL + + + + V++++ L + F LG
Sbjct: 70 CQRENIPLHKVHFDTQAYADLHKVSIEMAARELRYRY-------FFQLK----EALGADG 118
Query: 131 IVIGVCETDY 140
+ +G + D
Sbjct: 119 VCVGHHKEDS 128
>gi|157962804|ref|YP_001502838.1| thiamine biosynthesis protein ThiI [Shewanella pealeana ATCC
700345]
gi|189030651|sp|A8H6W6|THII_SHEPA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|157847804|gb|ABV88303.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
pealeana ATCC 700345]
Length = 484
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 27/198 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVE 62
+ L L SGG DS + R R F+ G ++++ + +
Sbjct: 175 PMATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEI----------GVKQ 224
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ GE H + + + + + +I + + + R + + A +
Sbjct: 225 VAYHLWQKYGESHKVKFISVPF---DPVVQEILERIDNGQMG--VILKR--MMMRAATRV 277
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A ++GI +V G S T+ + I+ E + PL+ + K +
Sbjct: 278 AQKMGIQALVTGEAMGQVSS------QTLTNLN-VIDRCTEQ--LILRPLIAMDKQDIIN 328
Query: 183 LAQDIGGQDLVNLILEES 200
+++ IG +D I E
Sbjct: 329 ISRQIGTEDFAKSIPEYC 346
>gi|307545333|ref|YP_003897812.1| argininosuccinate synthase [Halomonas elongata DSM 2581]
gi|307217357|emb|CBV42627.1| argininosuccinate synthase [Halomonas elongata DSM 2581]
Length = 406
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W + +D V T + D GQ +VE + E+
Sbjct: 1 MSDVKKVVLAYSGGLDTSVIVKWLQETYDCEVVTFTADIGQGEEVEPARAKAEALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 YIEDLREEFVRDYVYPMFRANTIYEGEYLLGTSIA 95
>gi|255019822|ref|ZP_05291898.1| Argininosuccinate synthase [Acidithiobacillus caldus ATCC 51756]
gi|254970751|gb|EET28237.1| Argininosuccinate synthase [Acidithiobacillus caldus ATCC 51756]
Length = 399
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 26/136 (19%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE--- 62
+L +SGG D+S L W D++ V T + D GQ ELE +++
Sbjct: 1 MVKRVVLAYSGGLDTSVILKWLQDQYQCEVVTFTADIGQ--GEELEPARRKAEQLGAREV 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---FLVFA 119
+ + D++ P+ + ++ R +I + A
Sbjct: 59 FIDDLRQEFVRDYVFPMFRANTVYEGEYLLGTSI-------------ARPLIAKRMVEIA 105
Query: 120 ATLAYRLGITNIVIGV 135
A +G + G
Sbjct: 106 A----EVGADAVAHGA 117
>gi|284036611|ref|YP_003386541.1| sulfate adenylyltransferase small subunit [Spirosoma linguale DSM
74]
gi|283815904|gb|ADB37742.1| sulfate adenylyltransferase, small subunit [Spirosoma linguale
DSM 74]
Length = 300
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCV 56
M ++ + LLFSGG+DS T + AL F + D G + L+ R +
Sbjct: 17 MREVAGQFERPALLFSGGKDSITLVHLALKAFRPGKFPFPLVHIDTGHNFQEALDYRDAM 76
Query: 57 RKKIVELM 64
++I E +
Sbjct: 77 AERIGEKL 84
>gi|197284773|ref|YP_002150645.1| tRNA-specific 2-thiouridylase MnmA [Proteus mirabilis HI4320]
gi|227357779|ref|ZP_03842128.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Proteus mirabilis ATCC 29906]
gi|229486421|sp|B4EVG2|MNMA_PROMH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|194682260|emb|CAR41993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Proteus mirabilis HI4320]
gi|227162108|gb|EEI47122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Proteus mirabilis ATCC 29906]
Length = 367
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 36/149 (24%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELE 51
M+D +K ++ SGG DSS ++ +V L +Y +L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKEQGYQVVGLFMKNWEEDDDTEYCS-ASADLA 57
Query: 52 CRLCVRKKI------VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
V K+ + ++ D++ E H L G + + N +K +
Sbjct: 58 DAQAVCDKLGIELHTINFAAEYWDNVFE-HFLSEYKAGRTPNPDILCNKEIKFKA----- 111
Query: 106 TFVPGRNIIFLVFAATLAYRLGITNIVIG 134
FL +A A LG I G
Sbjct: 112 ---------FLEYA---AEDLGADYIATG 128
>gi|168185903|ref|ZP_02620538.1| thiamin biosynthesis protein ThiI [Clostridium botulinum C str.
Eklund]
gi|169296022|gb|EDS78155.1| thiamin biosynthesis protein ThiI [Clostridium botulinum C str.
Eklund]
Length = 327
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DY--GQRNKVELECRLCVRKKIVELMPK 66
AL L SGG DS D+ V + F Y G N + ++ + ++V+ +
Sbjct: 3 KALALISGGLDSILAAKLIKDQGIEVIGICFKSYFFGPENAKRMTKQIDIPLEVVDFSRE 62
Query: 67 WKD 69
D
Sbjct: 63 HFD 65
>gi|153807264|ref|ZP_01959932.1| hypothetical protein BACCAC_01542 [Bacteroides caccae ATCC 43185]
gi|149130384|gb|EDM21594.1| hypothetical protein BACCAC_01542 [Bacteroides caccae ATCC 43185]
Length = 365
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 15/133 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKIV 61
+I++ LL SGG DSS L+ V ++F Y E LE + + +
Sbjct: 1 MIEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARSLAEHLG 60
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + + + + + V + +N L P A
Sbjct: 61 IRHITYDAREVFNKQIIEYFVQEYM--AGRTPVPCTLCNNYLK---WP--------LLAE 107
Query: 122 LAYRLGITNIVIG 134
LA +GI I G
Sbjct: 108 LADEMGIFYIATG 120
>gi|67924710|ref|ZP_00518116.1| Asparagine synthase (glutamine-hydrolyzing) [Crocosphaera watsonii
WH 8501]
gi|67853456|gb|EAM48809.1| Asparagine synthase (glutamine-hydrolyzing) [Crocosphaera watsonii
WH 8501]
Length = 542
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 11/69 (15%)
Query: 13 LLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ SGG DSS + A + V T S +G+ ELE V
Sbjct: 314 VYLSGGLDSSCVTALAKQFHQETVHTYSIHFGEDYPNELEFSSLVAAHCQ---------- 363
Query: 72 GEDHILPLA 80
+ HIL ++
Sbjct: 364 TKHHILAIS 372
>gi|329890336|ref|ZP_08268679.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Brevundimonas diminuta ATCC 11568]
gi|328845637|gb|EGF95201.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Brevundimonas diminuta ATCC 11568]
Length = 410
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + V ++ Y ++ + C + I +
Sbjct: 46 RVVAAMSGGVDSTVVAALLHKAGYDVVGVTLQLYDHGEALKKKGACCAGQDIHDARLAAD 105
Query: 69 DSLGEDHILP 78
++L
Sbjct: 106 LIGIPHYVLD 115
>gi|291562696|emb|CBL41512.1| argininosuccinate synthase [butyrate-producing bacterium SS3/4]
Length = 405
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 9/73 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L +SGG D++ + W + + V + D GQ EL+ K
Sbjct: 1 MKEKVILAYSGGLDTTVLIPWLKENYDYDVVCVCIDVGQ--GNELDGLEERAKYCGAF-- 56
Query: 66 KWKDSLGEDHILP 78
L +H++
Sbjct: 57 ----KLYIEHVVD 65
>gi|167746538|ref|ZP_02418665.1| hypothetical protein ANACAC_01248 [Anaerostipes caccae DSM 14662]
gi|317471357|ref|ZP_07930712.1| arginosuccinate synthase [Anaerostipes sp. 3_2_56FAA]
gi|167653498|gb|EDR97627.1| hypothetical protein ANACAC_01248 [Anaerostipes caccae DSM 14662]
gi|316901163|gb|EFV23122.1| arginosuccinate synthase [Anaerostipes sp. 3_2_56FAA]
Length = 405
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + + V D GQ N+++ LE R + +
Sbjct: 1 MKEKVVLAYSGGLDTTAIIPWLKENYDYEVICCCVDVGQGNELDGLEERAKLSGATRLYI 60
Query: 65 PKWKDSLGEDHILP 78
D +D+++P
Sbjct: 61 EDVVDEFVDDYVIP 74
>gi|89094683|ref|ZP_01167619.1| argininosuccinate synthase [Oceanospirillum sp. MED92]
gi|89081029|gb|EAR60265.1| argininosuccinate synthase [Oceanospirillum sp. MED92]
Length = 408
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +L +SGG D+S + W D + V T + D GQ +VE + E+
Sbjct: 1 MSEIKKVVLAYSGGLDTSVIVRWLQDEYNAEVVTFTADLGQGEEVEPARAKAEALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIEDLREEFVRDFVFPMFRANTIYEGEYLLGTSIA 95
>gi|262306061|gb|ACY45623.1| gln amidotransferase [Lepas anserifera]
Length = 197
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
LLL SGG DS+ C + ++V + D G
Sbjct: 43 TQKVLLLVSGGVDSTVCAALLHKALSPEQVVAVHIDNG 80
>gi|262306041|gb|ACY45613.1| gln amidotransferase [Ephemerella inconstans]
Length = 197
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYG 43
LLL SGG DS+ C + D+V + D G
Sbjct: 45 KVLLLVSGGVDSTVCAALLNKALPQDQVIAVHIDNG 80
>gi|255066218|ref|ZP_05318073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria sicca ATCC 29256]
gi|255049428|gb|EET44892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria sicca ATCC 29256]
Length = 367
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
DI ++ + ++ SGG DSS + +V +
Sbjct: 2 DITQQPSNIIVGLSGGVDSSVTAALLKQEGYQVRGV 37
>gi|237738505|ref|ZP_04568986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium mortiferum ATCC 9817]
gi|229420385|gb|EEO35432.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium mortiferum ATCC 9817]
Length = 357
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
D K + SGG DSST + + ++
Sbjct: 13 DEKNKNIKIAVAMSGGVDSSTVAYILKKQGYDLIGITMR 51
>gi|229489828|ref|ZP_04383685.1| tRNA(Ile)-lysidine synthetase [Rhodococcus erythropolis SK121]
gi|229323338|gb|EEN89102.1| tRNA(Ile)-lysidine synthetase [Rhodococcus erythropolis SK121]
Length = 325
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ A++ SGG DS + A+ D V+ L D ++++ + V + +
Sbjct: 24 EPRRRAVVALSGGADSLALTAAAVAETDSVDALIVD----HRLQ-DGSDAVARSAADQAL 78
Query: 66 KWKDSLGEDHILPLAILGDISHSSL-TKNVAMKIQDNNLPN 105
+ +A G + ++ + A++ +LP
Sbjct: 79 ALGCRTATVLTVDVAEGGSLEAAAREARYSALRDARTDLPV 119
>gi|149532439|ref|XP_001516069.1| PREDICTED: similar to Argininosuccinate synthase
(Citrulline--aspartate ligase), partial
[Ornithorhynchus anatinus]
Length = 123
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 8/55 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----GQRNKVELECRLC 55
+ + +L +SGG D+S L W ++ + Y GQR K E
Sbjct: 1 MSGKGTVVLAYSGGLDTSCILVWLKEQGYDIIA----YLREEGQRAKNPEEEEAA 51
>gi|332796753|ref|YP_004458253.1| GMP synthase domain-containing protein [Acidianus hospitalis W1]
gi|332694488|gb|AEE93955.1| GMP synthase domain protein [Acidianus hospitalis W1]
Length = 371
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 36/195 (18%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ L SGG DS+T ++ + D G +RK +
Sbjct: 20 REEKILAAISGGVDSTTAAVLMYKILGKQLLPIMIDTG-----------FLRKDEARKVK 68
Query: 66 KWKDSLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ I+ + + + S + K +D +F + +A
Sbjct: 69 DMLKDILPLQIVDKSEEFISALEGISDAEEKRKKFRD-------------LFYSTLSAIA 115
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAI-ETAINLGMES----HVTVHTPLMWLKKY 178
GI +V G D+ I+ + LG+++ V PL L K
Sbjct: 116 KEHGIRYLVQGTIAADWVE----TQGGIKTQHNVLVQLGIDTEKTWGFKVIEPLADLYKD 171
Query: 179 ETWKLAQDIGGQDLV 193
E LA+ +G +
Sbjct: 172 EVRALARYLGLPKEI 186
>gi|261252577|ref|ZP_05945150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio orientalis CIP 102891]
gi|260935968|gb|EEX91957.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio orientalis CIP 102891]
Length = 378
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKKIVELM 64
++ SGG DSS + +VE L +N E + C + +
Sbjct: 8 NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAEDLADA 63
Query: 65 PKWKDSLGED-HILPLA 80
D LG H + A
Sbjct: 64 QAVCDKLGIHLHTINFA 80
>gi|153813145|ref|ZP_01965813.1| hypothetical protein RUMOBE_03554 [Ruminococcus obeum ATCC 29174]
gi|149830800|gb|EDM85890.1| hypothetical protein RUMOBE_03554 [Ruminococcus obeum ATCC 29174]
Length = 375
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 4/43 (9%)
Query: 1 MNDIIK----KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
MN I A++ SGG DSS + +
Sbjct: 1 MNQQITGEIYMQKKAIIAMSGGVDSSVAAYLMVKEGYDCAGAT 43
>gi|159040606|ref|YP_001539858.1| thiamine biosynthesis/tRNA modification protein ThiI [Caldivirga
maquilingensis IC-167]
gi|157919441|gb|ABW00868.1| thiamine biosynthesis/tRNA modification protein ThiI [Caldivirga
maquilingensis IC-167]
Length = 416
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 25/179 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L L SGG DS R V+ L C L ++ L+ +
Sbjct: 181 KVLALVSGGFDSPVAYWLMSRRGALVDALF------------CSLAPPVDVIGLIRVIR- 227
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
L E+ + L I+ + N +++L N +F F LA + +
Sbjct: 228 YLYENWVFGYDPLIMIADCTQLVNAMRSSVNSHLM-------NTVFKKFLYRLAESIAVE 280
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+G+ + G + + + + +V + PL+ + K + KLA+ IG
Sbjct: 281 GGYMGIVTGESLG-----QVSSQTLSNLYSASAGINVPIFRPLIGMDKDDIIKLAKRIG 334
>gi|317492930|ref|ZP_07951354.1| thiamine biosynthesis/tRNA modification protein ThiI
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919052|gb|EFV40387.1| thiamine biosynthesis/tRNA modification protein ThiI
[Enterobacteriaceae bacterium 9_2_54FAA]
Length = 482
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + R RV F+ G K++
Sbjct: 173 PIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG------SAHEIGVKQVAHY 226
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ S + + + + K+ D + + R + + A+ +A
Sbjct: 227 LWNRFGSSHRVRFVAIDFAPVVG------EILEKVDDGQMG--VILKR--MMMRAASKVA 276
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R G+ +V G S + + + + + PL+ K +
Sbjct: 277 ERYGVQALVTGEALGQVSS---------QTLTNLRLIDGVTDTLILRPLISHDKEHIIDM 327
Query: 184 AQDIGGQDL 192
A++IG +D
Sbjct: 328 AREIGTEDF 336
>gi|311695258|gb|ADP98131.1| argininosuccinate synthase [marine bacterium HP15]
Length = 408
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + +L +SGG D+S + W D + V T + D GQ +VE +
Sbjct: 3 SKGMSDIKKVVLAYSGGLDTSVIVRWLQDTYNCEVVTFTADIGQGEEVEPARAKAEALGV 62
Query: 61 VEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
E+ + ++ D++ P+ I ++
Sbjct: 63 KEIYIEDLREEFVRDYVFPMFRANTIYEGEYLLGTSIA 100
>gi|226330495|ref|ZP_03806013.1| hypothetical protein PROPEN_04413 [Proteus penneri ATCC 35198]
gi|225201290|gb|EEG83644.1| hypothetical protein PROPEN_04413 [Proteus penneri ATCC 35198]
Length = 367
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 36/149 (24%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELE 51
M+D +K ++ SGG DSS ++ +V L +Y +L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKEQGYQVVGLFMKNWEEDDDTEYCS-ASTDLA 57
Query: 52 CRLCVRKKI------VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
V K+ + ++ D++ E H L G + + N +K +
Sbjct: 58 DAQAVCDKLGIELYTINFAAEYWDNVFE-HFLSEYKAGRTPNPDILCNKEIKFKA----- 111
Query: 106 TFVPGRNIIFLVFAATLAYRLGITNIVIG 134
FL +A A LG I G
Sbjct: 112 ---------FLEYA---AEDLGADYIATG 128
>gi|254415286|ref|ZP_05029047.1| Asparagine synthase family [Microcoleus chthonoplastes PCC 7420]
gi|196177761|gb|EDX72764.1| Asparagine synthase family [Microcoleus chthonoplastes PCC 7420]
Length = 591
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ SGG DSST + + +V+ S D+G EL V
Sbjct: 228 VFLSGGLDSSTIAALLVQAGVKVKAYSLDFGLAGVSELPYAEQVA 272
>gi|161833723|ref|YP_001597919.1| putative argininosuccinate synthase (argG)/acetyltransferase
activity of N-acetylglutamate synthase (argA)
[Candidatus Sulcia muelleri GWSS]
gi|152206213|gb|ABS30523.1| putative argininosuccinate synthase (argG)/acetyltransferase
activity of N-acetylglutamate synthase (argA)
[Candidatus Sulcia muelleri GWSS]
Length = 580
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+N+ + K LL +SGG D+S CL + + +V T+ + G N +LE I
Sbjct: 180 LNNYLNKGDKILLAYSGGLDTSYCLKYLTNEGYKVITIIINTGVFNNKDLESIEKRALNI 239
Query: 61 VELMP 65
+
Sbjct: 240 GAISH 244
>gi|332360948|gb|EGJ38753.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK355]
Length = 404
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 63/192 (32%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS AL R +E + F KK +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K + L T R + + G
Sbjct: 233 FGGNIQFIEVPF------TEIQEEIKAKAPEAYLMTLT----R-RFMMRITDRIREERGA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + TI +++ AIN + V P++ + K E ++A+ I
Sbjct: 282 QVIINGESLGQVAS------QTIESMQ-AINAVTNTP--VIRPVVTMDKLEIIEIAEKID 332
Query: 189 GQDLVNLILEES 200
+ E+
Sbjct: 333 TFQISIQPFEDC 344
>gi|323351681|ref|ZP_08087335.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis VMC66]
gi|322122167|gb|EFX93893.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis VMC66]
gi|325687993|gb|EGD30013.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK72]
Length = 404
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 63/192 (32%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS AL R +E + F KK +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K + L T R + + G
Sbjct: 233 FGGNIQFIEVPF------TEIQEEIKAKAPEAYLMTLT----R-RFMMRITDRIREERGA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + TI +++ AIN + V P++ + K E ++A+ I
Sbjct: 282 QVIINGESLGQVAS------QTIESMQ-AINAVTNTP--VIRPVVTMDKLEIIEIAEKID 332
Query: 189 GQDLVNLILEES 200
+ E+
Sbjct: 333 TFQISIQPFEDC 344
>gi|209528181|ref|ZP_03276652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arthrospira maxima CS-328]
gi|209491390|gb|EDZ91774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arthrospira maxima CS-328]
Length = 359
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 24/134 (17%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V L+ + C + +V+ +
Sbjct: 2 QKIVVGLSGGVDSSAAAAILHHQGYEVVGLTL------WLMRGKGQCCSEGMVDAAHICE 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNII----FLVFAA 120
+I+ L T + ++ T +P R + L +A+
Sbjct: 56 QLGIPHYIVDSRDLFQ------THIIDYLVEGYGAGITPLPCSQCNR-AVKFGPMLGYAS 108
Query: 121 TLAYRLGITNIVIG 134
T L I +I G
Sbjct: 109 T---ELNINHIATG 119
>gi|119898477|ref|YP_933690.1| argininosuccinate synthase [Azoarcus sp. BH72]
gi|166219945|sp|A1K7J8|ASSY_AZOSB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|119670890|emb|CAL94803.1| ArgG protein [Azoarcus sp. BH72]
Length = 409
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ ++E R K ++
Sbjct: 1 MSDVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELE-PARQKALKFGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 ENIFIDDLREEFVRD 74
>gi|51893527|ref|YP_076218.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Symbiobacterium thermophilum IAM 14863]
gi|81388362|sp|Q67LS2|MNMA_SYMTH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|51857216|dbj|BAD41374.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Symbiobacterium thermophilum IAM 14863]
Length = 390
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
A L+ SGG DSS + +++ V ++ +
Sbjct: 27 AKRVLMAMSGGVDSSVAAALLVEQGYEVIGVTMN 60
>gi|332559126|ref|ZP_08413448.1| tRNA(Ile)-lysidine synthetase [Rhodobacter sphaeroides WS8N]
gi|332276838|gb|EGJ22153.1| tRNA(Ile)-lysidine synthetase [Rhodobacter sphaeroides WS8N]
Length = 412
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL----CVRKKIVELMPKWKDS 70
SGG DS L A + ++ D+G R + E R C + + +W+
Sbjct: 23 VSGGGDSMALLHLAAEAGIATRAVTVDHGLRPEAADEARAVARVCAGLGVPHDILRWEGW 82
Query: 71 LGEDHILP------LAILGDISHSSLTKNVAMKIQDNNLPNTF 107
G +++ L ++ + + + VA+ +++ TF
Sbjct: 83 DGRGNLMDQARRARLRLIAGWARGAGLEAVALGHTRDDVAETF 125
>gi|326803752|ref|YP_004321570.1| thiamine biosynthesis/tRNA modification protein ThiI [Aerococcus
urinae ACS-120-V-Col10a]
gi|326651235|gb|AEA01418.1| thiamine biosynthesis/tRNA modification protein ThiI [Aerococcus
urinae ACS-120-V-Col10a]
Length = 407
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + +L+ SGG DS A+ R R + F
Sbjct: 174 PVGTSSRGILMLSGGIDSPVAGYLAMKRGVRPIAIHF 210
>gi|310827767|ref|YP_003960124.1| argininosuccinate synthase [Eubacterium limosum KIST612]
gi|308739501|gb|ADO37161.1| argininosuccinate synthase [Eubacterium limosum KIST612]
Length = 413
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRL 54
A +L +SGG D++T + W + + V + D GQ + E LE R
Sbjct: 2 SAKKVILAYSGGLDTTTIIPWLKETYDYEVICVCVDVGQGKETEGLEERA 51
>gi|255994117|ref|ZP_05427252.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
saphenum ATCC 49989]
gi|255993785|gb|EEU03874.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
saphenum ATCC 49989]
Length = 397
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 61/183 (33%), Gaps = 27/183 (14%)
Query: 19 QDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHIL 77
DS R + + F+ Y +K L+ + ++ ++ E + +
Sbjct: 201 IDSPVAGFLMARRGMSISAVHFNSYPYTSKRALDKVMRLKDQLAEYVGNF---------- 250
Query: 78 PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
+ + + ++ A + + L F + A +A + ++ G
Sbjct: 251 DVRTVNLLPAQMAIRSKAPENEGTILTRRF-------MIRIANIIAEEVHANALITGESL 303
Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197
+ + E+ +++ + PL+ K + +A+DIG D+
Sbjct: 304 GQVAS---------QTAESLAVTDAAANLPILRPLIAYDKRDIIGIAKDIGCYDISVEPF 354
Query: 198 EES 200
E+
Sbjct: 355 EDC 357
>gi|289582131|ref|YP_003480597.1| NAD+ synthetase [Natrialba magadii ATCC 43099]
gi|289531684|gb|ADD06035.1| NAD+ synthetase [Natrialba magadii ATCC 43099]
Length = 284
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 77/207 (37%), Gaps = 25/207 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
A A + SGG DS+T A++ D V ++ + E + + +++ E +
Sbjct: 44 ANGAEIALSGGIDSTTMAYLAVEALGADNVHAITL---PKAVNE-DTNMSDAERVAEELG 99
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
D + D I+ + +++ + + + + NT R + + +A R
Sbjct: 100 IEYDVIEIDPIMDEIL--ELADAENQNKSEDRWEGRYVGNTS--AR--VRMTITYLIANR 153
Query: 126 LGITNIVIGVCETDYSGY--------PDCRH--DTIRAI--ETAINLGMESHVTVHTPLM 173
+ G +GY DC + + + A +LG V TP
Sbjct: 154 ENRIVLGTGNRAELATGYVTKYGDGGVDCNPLGNLYKQQVRQVAAHLGASEDVVQKTPTG 213
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEES 200
+ YE+ + +G D ++ +L S
Sbjct: 214 GMVDYESDEEELGLG-YDTLDAVLALS 239
>gi|326201928|ref|ZP_08191798.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium papyrosolvens DSM 2782]
gi|325987723|gb|EGD48549.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium papyrosolvens DSM 2782]
Length = 359
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 18/136 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMP 65
+L SGG DSS + L + V ++ Q E + C V+
Sbjct: 3 PKKVMLGMSGGVDSSVAAAILLKQGYEVIGVTLQIWQDMDEERQKSEGGCCSLSAVDDAR 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFLVF 118
+ + LG + + DI + ++ + + PN P R++ L
Sbjct: 63 RVANKLGIPYYV--LNFKDIFNKTVIEYFKEEYFKGRTPN---PCIACNRHVKWQAMLDK 117
Query: 119 AATLAYRLGITNIVIG 134
A + +GI I G
Sbjct: 118 ALS----MGIDYIATG 129
>gi|237747034|ref|ZP_04577514.1| argininosuccinate synthase [Oxalobacter formigenes HOxBLS]
gi|229378385|gb|EEO28476.1| argininosuccinate synthase [Oxalobacter formigenes HOxBLS]
Length = 408
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ ++E R K ++
Sbjct: 1 MSDVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELE-PARQKALKFGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 ENIFIDDLREEFVRD 74
>gi|257386834|ref|YP_003176607.1| argininosuccinate synthase [Halomicrobium mukohataei DSM 12286]
gi|257169141|gb|ACV46900.1| argininosuccinate synthase [Halomicrobium mukohataei DSM 12286]
Length = 424
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQ 44
M AL FSGG D++ C+S + +D V ++ D GQ
Sbjct: 1 MTPETASGTVALA-FSGGLDTTVCVSLLKEEYGYDEVVGVTVDVGQ 45
>gi|261363616|ref|ZP_05976499.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria mucosa ATCC 25996]
gi|288568144|gb|EFC89704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria mucosa ATCC 25996]
Length = 367
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
DI ++ + ++ SGG DSS + + +V +
Sbjct: 2 DITQQPSNIIVGLSGGVDSSVTAALLKQQGYQVRGV 37
>gi|226324447|ref|ZP_03799965.1| hypothetical protein COPCOM_02228 [Coprococcus comes ATCC 27758]
gi|225206895|gb|EEG89249.1| hypothetical protein COPCOM_02228 [Coprococcus comes ATCC 27758]
Length = 406
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++T + W + F V D GQ +++ L+ R + +
Sbjct: 1 MKEKVVLAYSGGLDTTTLIPWLKETFDYEVICCCIDCGQGEELDGLDERAKLAGASKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +++I+P + ++ +M
Sbjct: 61 EDITDDFCDNYIMPCVQANAVYENAYLLGTSMA 93
>gi|170289791|ref|YP_001736607.1| argininosuccinate synthase [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170173871|gb|ACB06924.1| Argininosuccinate synthase [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 412
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 15/126 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWK 68
+L +SGG D++ + W ++ V T + + GQ ++ E+E R
Sbjct: 7 KVVLAYSGGLDTTVAIKWFEEQGIEVVTFTAELGQGAELDEIERRAYEAGSSKHYSLNLI 66
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D + ++ P + + + ++ + +A R G
Sbjct: 67 DEFADVYVAPAIMANALYEGEYPISSSLSRP--------------LIASKLVEIAEREGA 112
Query: 129 TNIVIG 134
+ G
Sbjct: 113 DAVAHG 118
>gi|291519251|emb|CBK74472.1| thiazole biosynthesis/tRNA modification protein ThiI [Butyrivibrio
fibrisolvens 16/4]
Length = 393
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 59/199 (29%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A A+LL SGG DS R + F + +K +
Sbjct: 176 PVGTAGKAMLLLSGGIDSPVAGYMISKRGVSLSATYF-----HAPPYTSEQAKQKVVDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+L+ K+ + + I I + + + ++ + A
Sbjct: 231 KLVAKYSGPIDLHIVNFTDIQLYIYQQCAHEELTIIMRRY-------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A +V G + + +++ + V+ PL+ K +
Sbjct: 278 FAKENDCLGLVTGESIGQVAS---------QTMQSLNCTNAVCSLPVYRPLIAFDKQDIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
+++ I + L E+
Sbjct: 329 DISEKIDTYETSILPYEDC 347
>gi|269929160|ref|YP_003321481.1| argininosuccinate synthase [Sphaerobacter thermophilus DSM 20745]
gi|269788517|gb|ACZ40659.1| argininosuccinate synthase [Sphaerobacter thermophilus DSM 20745]
Length = 409
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+L +SGG D+S L+W + + V + D GQ + E + +L
Sbjct: 8 KVVLAYSGGLDTSVILAWIKEHYGCEVIAFTADVGQGDSFEGLEAKALASGASKLY 63
>gi|52352404|gb|AAU43693.1| argininosuccinate synthase [uncultured archaeon GZfos26D8]
Length = 388
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRK 58
+L +SGG D+S C+ + +D V ++ D GQ E + K
Sbjct: 2 KKVVLAYSGGLDTSVCIPLLKEHYGYDEVIAVTVDVGQPGDDIKEAKERGAK 53
>gi|45358917|ref|NP_988474.1| thiamine biosynthesis protein [Methanococcus maripaludis S2]
gi|45047783|emb|CAF30910.1| Thiamine biosynthesis protein:THUMP domain [Methanococcus
maripaludis S2]
Length = 383
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 25/183 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++L S G DS R ++ L + + L +K+V+++ +
Sbjct: 183 KVIVLLSDGIDSPVSAYMMAKRGCKLLLL-------HMKTSDEGLEKTQKLVDVLSDFDP 235
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
++ L I + LT+ K L A A
Sbjct: 236 EAKFVYVDFNEELAKI-KAELTEINRDKYTCLYCKK--------YMLKLAEKHAKWHKCD 286
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G + T++ + I+ G++ + PL+ L K E +A+ IG
Sbjct: 287 AIVNGDNMGQVAS------QTLKNL-RVISEGIDYP--ILRPLIGLDKVEIMDIARKIGT 337
Query: 190 QDL 192
D+
Sbjct: 338 FDI 340
>gi|327401723|ref|YP_004342562.1| Argininosuccinate synthase [Archaeoglobus veneficus SNP6]
gi|327317231|gb|AEA47847.1| Argininosuccinate synthase [Archaeoglobus veneficus SNP6]
Length = 393
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+L +SGG D++ C+ +++ D V T++ D GQ + E++ KK +
Sbjct: 2 KVVLSYSGGLDTTVCIPLLKEKYGFDEVVTVTVDIGQPPE-EIKEAEKRGKKYAD 55
>gi|323494972|ref|ZP_08100063.1| tRNA-specific 2-thiouridylase MnmA [Vibrio brasiliensis LMG
20546]
gi|323310767|gb|EGA63940.1| tRNA-specific 2-thiouridylase MnmA [Vibrio brasiliensis LMG
20546]
Length = 378
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKKIVELM 64
++ SGG DSS + +VE L +N E + C + +
Sbjct: 8 NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFM----KNWEEDDNEEYCTAAEDLADA 63
Query: 65 PKWKDSLGED-HILPLA 80
D LG H + A
Sbjct: 64 QAVCDKLGIHLHTINFA 80
>gi|320101712|ref|YP_004177303.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Isosphaera pallida ATCC 43644]
gi|319748994|gb|ADV60754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Isosphaera pallida ATCC 43644]
Length = 401
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 59/194 (30%), Gaps = 26/194 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
P +L SGG DSS ++ V L R V + K
Sbjct: 3 RPRVVLAMSGGVDSSVAAGLLKNQGYDVVGLFM----RTGVHFDDPTRRAKTCCSQFDAL 58
Query: 68 KDSLGEDHILPLAILGDISHSSL---TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
D L + + ++ + PN V N I+L F AY
Sbjct: 59 DAQAVADR-LDIPFHALDFEADFGRIMEDFTEEYLRGRTPNPCV-MCN-IWLKFGKLWAY 115
Query: 125 --RLGITNIVIGV---CETDYSGYPDCRHDTIRAIETA-----INLGMESHV--TVHTPL 172
++G + G D SG R R ++ A + G+ + + P+
Sbjct: 116 GKKVGADFVATGHYARVVQDESG----RPRIARGVDRAKDQSYVLSGVRREILQRMLLPV 171
Query: 173 MWLKKYETWKLAQD 186
K E A+D
Sbjct: 172 GGFTKEEIRAKARD 185
>gi|196019212|ref|XP_002118942.1| hypothetical protein TRIADDRAFT_9863 [Trichoplax adhaerens]
gi|190577616|gb|EDV18572.1| hypothetical protein TRIADDRAFT_9863 [Trichoplax adhaerens]
Length = 136
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDS 70
++ SGG DSST + ++ V ++ Y + C + I +
Sbjct: 2 VVAMSGGVDSSTVAAMLHEQNYEVIGITLQLYDAGEMAAKKGACCAGQDIYDAKVAADKI 61
Query: 71 LGEDHILPLAIL 82
++L L
Sbjct: 62 GIPHYVLNYESL 73
>gi|169350211|ref|ZP_02867149.1| hypothetical protein CLOSPI_00955 [Clostridium spiroforme DSM 1552]
gi|169292994|gb|EDS75127.1| hypothetical protein CLOSPI_00955 [Clostridium spiroforme DSM 1552]
Length = 398
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 64/183 (34%), Gaps = 34/183 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPK 66
ALL+ SGG DS L R +E + F Y EL + +V+ +
Sbjct: 178 KALLMMSGGIDSPVAGYLTLKRGVDIECIHFAAPPY----TNELAREKVL--DLVDKLRH 231
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAATLAY 124
+ + HI+ L + ++ AM + + + V +N LA
Sbjct: 232 YTHGQIKVHIVNFTKLQLAVYDHCDESYAMTVMRRMMYRISEIVANKN-------HCLAL 284
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
G + IG + T+ +++ + + V P++ L K E +A
Sbjct: 285 VNGES---IGQVAS----------QTLDSMQVINEV---VKIPVLRPVLCLDKLEIIDIA 328
Query: 185 QDI 187
I
Sbjct: 329 NAI 331
>gi|167628257|ref|YP_001678756.1| hypothetical protein HM1_0126 [Heliobacterium modesticaldum Ice1]
gi|167590997|gb|ABZ82745.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 453
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 77/227 (33%), Gaps = 25/227 (11%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPKWK 68
+ LFSGG DS +L+ +S Y + + E+ L +
Sbjct: 152 VSLFSGGMDSLIFAINSLEEKKTPLFISHAGDGYTKNYQKEIINTLSNNYADISFSQLNL 211
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTF---VPGRNIIFLVFAATLAY 124
HI+ + + + S +++ + + LP VP N + +A
Sbjct: 212 WMSFNKHIVSQSCKENTTRSRSFLYISLALFALSGLPKVDILDVPE-NGL-------IAI 263
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ + ++ +G T + + + + ++ P K E +A
Sbjct: 264 NVPLDDLRVGSHSTRTTH-----PYYFKLWNEILGIVNLGK-SIRNPYWNKTKGE---MA 314
Query: 185 QDIGGQDLVNLILEESHTCYLGKR-DKRYEWGYGCNSCPACYLRQKG 230
+D ++L+ +L S +C + R C C C +R+
Sbjct: 315 RDCLNKELLLDLLPISMSCSAPTKYRYRGSTHMHCGHCVPCIIRRAA 361
>gi|126463079|ref|YP_001044193.1| tRNA(Ile)-lysidine synthetase [Rhodobacter sphaeroides ATCC 17029]
gi|126104743|gb|ABN77421.1| tRNA(Ile)-lysidine synthetase [Rhodobacter sphaeroides ATCC 17029]
Length = 412
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL----CVRKKIVELMPKWKDS 70
SGG DS L A + ++ D+G R + E R C + + +W+
Sbjct: 23 VSGGGDSMALLHLAAEAGIATRAVTVDHGLRPEAADEARAVARVCAGLGVPHDILRWEGW 82
Query: 71 LGEDHILP------LAILGDISHSSLTKNVAMKIQDNNLPNTF 107
G +++ L ++ + + + VA+ +++ TF
Sbjct: 83 DGRGNLMDQARRARLRLIAGWARGAGLEAVALGHTRDDVAETF 125
>gi|302380574|ref|ZP_07269039.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
magna ACS-171-V-Col3]
gi|302311517|gb|EFK93533.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
magna ACS-171-V-Col3]
Length = 391
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 60/184 (32%), Gaps = 29/184 (15%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKWKDSLGEDHI 76
DS R RV+ L F + + K++ E + + ++ +
Sbjct: 190 IDSPVAAFLMAKRGVRVDCLHF-----HSYPFTSQRGFEKVKQLAEEVSYYTGNINFYSV 244
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
L + I+ + + + + + + A +A I ++ G
Sbjct: 245 NLLPVYKAITKNCKERMMTIISRR-------------FMMRIAERIANENKIDALITGES 291
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
+ + I+ + + + + PL+ K E ++A++IG + L
Sbjct: 292 LGQVAS---------QTIQGVSVINEVTSLPILRPLIASDKTEIIEIAREIGTYETSILP 342
Query: 197 LEES 200
E+
Sbjct: 343 FEDC 346
>gi|295695739|ref|YP_003588977.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Bacillus tusciae DSM 2912]
gi|295411341|gb|ADG05833.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Bacillus tusciae DSM 2912]
Length = 363
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ ++ SGG DSS + +R V ++
Sbjct: 5 TVVVAMSGGVDSSVTAALLKERGYDVIGITMR 36
>gi|297588229|ref|ZP_06946872.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
magna ATCC 53516]
gi|297573602|gb|EFH92323.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
magna ATCC 53516]
Length = 391
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 60/184 (32%), Gaps = 29/184 (15%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKWKDSLGEDHI 76
DS R RV+ L F + + K++ E + + ++ +
Sbjct: 190 IDSPVAAFLMAKRGVRVDCLHF-----HSYPFTSQRGFEKVKQLAEEVSYYTGNINFYSV 244
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
L + I+ + + + + + + A +A I ++ G
Sbjct: 245 NLLPVYKAITKNCKERMMTIISRR-------------FMMRIAERIANENKIDALITGES 291
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
+ + I+ + + + + PL+ K E ++A++IG + L
Sbjct: 292 LGQVAS---------QTIQGVSVINEVTSLPILRPLIASDKTEIIEIAREIGTYETSILP 342
Query: 197 LEES 200
E+
Sbjct: 343 FEDC 346
>gi|169824256|ref|YP_001691867.1| thiamine biosynthesis protein [Finegoldia magna ATCC 29328]
gi|303233906|ref|ZP_07320555.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
magna BVS033A4]
gi|238687724|sp|B0RZV0|THII_FINM2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|167831061|dbj|BAG07977.1| thiamine biosynthesis protein [Finegoldia magna ATCC 29328]
gi|302494831|gb|EFL54588.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
magna BVS033A4]
Length = 391
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 60/184 (32%), Gaps = 29/184 (15%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKWKDSLGEDHI 76
DS R RV+ L F + + K++ E + + ++ +
Sbjct: 190 IDSPVAAFLMAKRGVRVDCLHF-----HSYPFTSQRGFEKVKQLAEEVSYYTGNINFYSV 244
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
L + I+ + + + + + + A +A I ++ G
Sbjct: 245 NLLPVYKAITKNCKERMMTIISRR-------------FMMRIAERIANENKIDALITGES 291
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
+ + I+ + + + + PL+ K E ++A++IG + L
Sbjct: 292 LGQVAS---------QTIQGVSVINEVTSLPILRPLIASDKTEIIEIAREIGTYETSILP 342
Query: 197 LEES 200
E+
Sbjct: 343 FEDC 346
>gi|166031729|ref|ZP_02234558.1| hypothetical protein DORFOR_01429 [Dorea formicigenerans ATCC
27755]
gi|166028182|gb|EDR46939.1| hypothetical protein DORFOR_01429 [Dorea formicigenerans ATCC
27755]
Length = 359
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ SGG DSS ++ V ++
Sbjct: 2 EKKKVVVGMSGGVDSSVAAWLLKEQGYDVIGVT 34
>gi|169832175|ref|YP_001718157.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Desulforudis audaxviator MP104C]
gi|205816638|sp|B1I677|MNMA_DESAP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|169639019|gb|ACA60525.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Desulforudis audaxviator MP104C]
Length = 343
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 15/73 (20%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DSST + RV TL+ ++ + LG
Sbjct: 6 VALSGGVDSSTTALLMKEAGHRVFTLTM--------------ATNDRVAAEAARVSAFLG 51
Query: 73 -EDHILPLAILGD 84
H+L ++ L +
Sbjct: 52 LPHHVLDISGLFE 64
>gi|282879854|ref|ZP_06288581.1| tRNA(Ile)-lysidine synthetase [Prevotella timonensis CRIS 5C-B1]
gi|281306248|gb|EFA98281.1| tRNA(Ile)-lysidine synthetase [Prevotella timonensis CRIS 5C-B1]
Length = 448
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 44/139 (31%), Gaps = 24/139 (17%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ K L+ SGG DS L R+E + C +R + +
Sbjct: 16 SLLNKEELYLVALSGGADSVCLLRCLQALGYRLEAVH------------CHFHLRAEEAD 63
Query: 63 LMPKWKDSLGEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ L +P + + + + V++++ +L +F R ++
Sbjct: 64 RDLSFCQDLCAKLQIPFHSTHFDTKTYAQSHGVSIEMAARDLRYSF--FRKMV------- 114
Query: 122 LAYRLGITNIVIGVCETDY 140
+ +G D
Sbjct: 115 --QARHAAAVCVGHHSEDS 131
>gi|262066104|ref|ZP_06025716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium periodonticum ATCC 33693]
gi|291380199|gb|EFE87717.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium periodonticum ATCC 33693]
Length = 362
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
D KK + SGG DSST + + ++
Sbjct: 18 DSNKKGIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|260576149|ref|ZP_05844142.1| argininosuccinate synthase [Rhodobacter sp. SW2]
gi|259021629|gb|EEW24932.1| argininosuccinate synthase [Rhodobacter sp. SW2]
Length = 409
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ++E V I
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVMTFTADLGQGEELEPARAKAVLLGI 57
>gi|138895516|ref|YP_001125969.1| hypothetical protein GTNG_1864 [Geobacillus thermodenitrificans
NG80-2]
gi|134267029|gb|ABO67224.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 274
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 12/75 (16%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
++K+ + L+ FSGG DS+ L+ A + D+V ++ + V
Sbjct: 14 HLLKEMGNVLVAFSGGVDSTFLLAMAKEALGDQVLAVT-----------AVSETFPVREV 62
Query: 62 ELMPKWKDSLGEDHI 76
+ K + +G HI
Sbjct: 63 QHATKLAEQIGVKHI 77
>gi|189425988|ref|YP_001953165.1| ExsB family protein [Geobacter lovleyi SZ]
gi|189422247|gb|ACD96645.1| ExsB family protein [Geobacter lovleyi SZ]
Length = 261
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + P A+ FSGG DS+ L A D DR ++ D + E + ++I
Sbjct: 11 LTRSTPLAVA-FSGGVDSTLLLKVAHDTLGDRCCAITIDAPYHFRQEQDDATRFARQI 67
>gi|167040842|ref|YP_001663827.1| ExsB family protein [Thermoanaerobacter sp. X514]
gi|300914879|ref|ZP_07132195.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307723887|ref|YP_003903638.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X513]
gi|166855082|gb|ABY93491.1| ExsB family protein [Thermoanaerobacter sp. X514]
gi|300889814|gb|EFK84960.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307580948|gb|ADN54347.1| PP-loop domain protein [Thermoanaerobacter sp. X513]
Length = 286
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 65/190 (34%), Gaps = 44/190 (23%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVE 62
K +AL+ FSGG DS+ A +D RV ++ K EL+ + + KKI
Sbjct: 26 KLDNALIAFSGGVDST---FLAKVSYDVLGNRVLAVTATSPMHPKSELKEAVELAKKIG- 81
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ + +I I +NL + F +
Sbjct: 82 ---------IPHLVVEFNDILEIEEFRKNPLNRCYICKSNLFSRF------------KAI 120
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYET 180
A G I+ G D S + R + + +PL+ +KK E
Sbjct: 121 AEEKGFKYILEGTNADDVSDF---RP----------GRRALKELGILSPLLECGIKKEEI 167
Query: 181 WKLAQDIGGQ 190
L++++G
Sbjct: 168 RILSKELGLP 177
>gi|310821277|ref|YP_003953635.1| tRNA-specific 2-thiouridylase mnma [Stigmatella aurantiaca
DW4/3-1]
gi|309394349|gb|ADO71808.1| tRNA-specific 2-thiouridylase MnmA [Stigmatella aurantiaca
DW4/3-1]
Length = 348
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 33/89 (37%), Gaps = 11/89 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNK-------VELECRLCVRKK 59
++ SGG DSS + ++ V ++ Y + + +++ V +K
Sbjct: 2 RVVVAMSGGVDSSAAAALLKEQGHEVIGITLRVWSYEGKAQCGSCCSPDDIDDARAVAQK 61
Query: 60 I-VELMPKWKDSLGEDHILPLAILGDISH 87
+ + + + +D ++ + +
Sbjct: 62 LDIPFYVANAEEIFKDRVINPFVQSYLGG 90
>gi|312195586|ref|YP_004015647.1| argininosuccinate synthase [Frankia sp. EuI1c]
gi|311226922|gb|ADP79777.1| argininosuccinate synthase [Frankia sp. EuI1c]
Length = 419
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
MN K S SGG DS T W +V + D GQ ++ E
Sbjct: 1 MNISELKGESVAFFASGGLDSCTVTHWMAAHDVKVICFTADLGQPDETE 49
>gi|27375633|ref|NP_767162.1| argininosuccinate synthase [Bradyrhizobium japonicum USDA 110]
gi|30172779|sp|P59607|ASSY_BRAJA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|27348770|dbj|BAC45787.1| argininosuccinate synthase [Bradyrhizobium japonicum USDA 110]
Length = 445
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
M I+K K + FSGG D+S L W + R + + GQ
Sbjct: 1 MTTILKSLPKGEKVGIAFSGGLDTSAALLWMKQKGARCYAYTANLGQ 47
>gi|262306059|gb|ACY45622.1| gln amidotransferase [Metajapyx subterraneus]
Length = 197
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
LLL SGG DS+ C + R D+ + D G
Sbjct: 45 KVLLLVSGGVDSTVCAALLHKALREDQFIAVHIDNG 80
>gi|262306039|gb|ACY45612.1| gln amidotransferase [Eremocosta gigasella]
Length = 196
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V D G
Sbjct: 43 NNKVLMLISGGVDSTVCAALLHKALKDDQVIAFHIDNG 80
>gi|145219199|ref|YP_001129908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prosthecochloris vibrioformis DSM 265]
gi|205816888|sp|A4SD47|MNMA_PROVI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|145205363|gb|ABP36406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium phaeovibrioides DSM 265]
Length = 357
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+K+ + L+ SGG DS+ +D RV L+
Sbjct: 1 MKQETTVLVGISGGVDSAVAACMLVDEGYRVIGLNI 36
>gi|325958908|ref|YP_004290374.1| universal metal-binding-domain/4Fe-4S-binding-domain containing
ABC transporter protein [Methanobacterium sp. AL-21]
gi|325330340|gb|ADZ09402.1| universal metal-binding-domain/4Fe-4S-binding-domain containing
ABC transporter protein [Methanobacterium sp. AL-21]
Length = 226
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
A +L+SGG+DS+ + A++ VE L
Sbjct: 2 KAAVLYSGGKDSTMAVYKAIEEGYNVEYL 30
>gi|262306107|gb|ACY45646.1| gln amidotransferase [Scolopendra polymorpha]
Length = 197
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L+L SGG DS+ C + ++V + D G
Sbjct: 43 THKVLMLVSGGVDSTVCAALLRKALPEEQVIAVHIDNG 80
>gi|242279257|ref|YP_002991386.1| argininosuccinate synthase [Desulfovibrio salexigens DSM 2638]
gi|242122151|gb|ACS79847.1| argininosuccinate synthase [Desulfovibrio salexigens DSM 2638]
Length = 411
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
+ K +L +SGG D+S L W + V TL+ D GQ
Sbjct: 1 MSKIEKVVLAYSGGLDTSIILKWIKQEYNCEVITLTADLGQ 41
>gi|229814981|ref|ZP_04445319.1| hypothetical protein COLINT_02024 [Collinsella intestinalis DSM
13280]
gi|229809468|gb|EEP45232.1| hypothetical protein COLINT_02024 [Collinsella intestinalis DSM
13280]
Length = 434
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
MN+ K +L +SGG D+S C+ W D V + + GQ + + R
Sbjct: 1 MNNQQSK-EKVVLAYSGGLDTSVCIKWLQHEMDLDVIAMLGNVGQEHDGLEKVAEKAR 57
>gi|159905464|ref|YP_001549126.1| ExsB family protein [Methanococcus maripaludis C6]
gi|159886957|gb|ABX01894.1| ExsB family protein [Methanococcus maripaludis C6]
Length = 261
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 26/130 (20%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKKIVELM 64
K A++ FSGG DS T + + ++ Y + E VR+
Sbjct: 62 KKEKAVVAFSGGVDS-TASIIVGKKIFEICAVTVRSKYIMDAETEENVSELVRR------ 114
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
L H L I + + + ++ T + A
Sbjct: 115 ------LNVSHEFIDVNLDPIFEDTKSGKYHPCGRCHSTVETEI-----------LNYAE 157
Query: 125 RLGITNIVIG 134
+ GI I+ G
Sbjct: 158 KNGINYIIYG 167
>gi|126656453|ref|ZP_01727714.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cyanothece sp. CCY0110]
gi|126622139|gb|EAZ92846.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cyanothece sp. CCY0110]
Length = 349
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 26/135 (19%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS + + V L+ GQ C + +V+
Sbjct: 2 KKVVVGLSGGVDSSVAAASLQHQGYTVIGLTLWLMKGKGQ----------CCSEGMVDAA 51
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ HI+ L + + N + ++ + T +P R +
Sbjct: 52 FICEQLGVPHHIVDTRELFE----ANIINYLVSGYESGV--TPLPCSQCNR-AVKFGPML 104
Query: 121 TLA-YRLGITNIVIG 134
A L I G
Sbjct: 105 AYAREELNCDRIATG 119
>gi|90407002|ref|ZP_01215192.1| thiamine biosynthesis protein ThiI [Psychromonas sp. CNPT3]
gi|90311873|gb|EAS39968.1| thiamine biosynthesis protein ThiI [Psychromonas sp. CNPT3]
Length = 484
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 66/199 (33%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
+ S L L SGG DS + R RV F+ G +I
Sbjct: 175 PLGTQESVLSLISGGFDSGVSSYQFIKRGSRVHYCFFNLG-----------GAAHEIGVK 223
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + + G H + I + + K+++ + V R + +
Sbjct: 224 QVAYRLWERFGSSHKVK---FISIPFEPVVAEILEKVENGQMG--VVLKR--MMMRAGTL 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A RL I ++V G S + + + + + + PL+ K +
Sbjct: 277 VAERLDIESLVTGEALGQVSS---------QTLRNLSVIDKVTDMLILRPLIVTDKQDII 327
Query: 182 KLAQDIGGQDLVNLILEES 200
A+ IG +L I E
Sbjct: 328 DCARVIGTAELSETIPEYC 346
>gi|328947275|ref|YP_004364612.1| tRNA-specific 2-thiouridylase mnmA [Treponema succinifaciens DSM
2489]
gi|328447599|gb|AEB13315.1| tRNA-specific 2-thiouridylase mnmA [Treponema succinifaciens DSM
2489]
Length = 406
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ KK ++ SGG DS+ ++ V ++
Sbjct: 12 ELPKKGDRVVVGLSGGVDSTMTAMLLKEKGCDVTCVT 48
>gi|325294272|ref|YP_004280786.1| GMP synthase (glutamine-hydrolyzing) [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064720|gb|ADY72727.1| GMP synthase (glutamine-hydrolyzing) [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 517
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 58/193 (30%), Gaps = 31/193 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ + SGG DSS + D++ + D G K E E V K E
Sbjct: 220 KNVICALSGGVDSSVVAALLHKAIGDQLYPIFVDTGLLRKGERES---VEKTFREKFQMK 276
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKI-------QDNNLPNTFVPGRNIIFLVFAA 120
+ L L L ++ + + +P N FL
Sbjct: 277 NFRTVDASSLFLERLKGVTDPEKKRKIIGHTFIEVFEKAAKEIP-------NAHFLAQGT 329
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
+ ++ G T I++ L + + PL L K E
Sbjct: 330 LYPDVIESVSV-KGPSAT------------IKSHHNVGGLPERLNFKLIEPLRELFKDEV 376
Query: 181 WKLAQDIGGQDLV 193
+L +++G + +
Sbjct: 377 RELGKELGLPEEI 389
>gi|253572641|ref|ZP_04850042.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 1_1_6]
gi|251837773|gb|EES65863.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 1_1_6]
Length = 426
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 57/192 (29%), Gaps = 41/192 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L + E ++ R E + + +L K+ L
Sbjct: 23 LVALSGGADSVALLRVLHTAGYQCEAAHCNFHLRG----EESNRDEQFVRQLCQKYGIRL 78
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
H + + + K +++++ L + + G I
Sbjct: 79 ---HTIDFNT----TQYATEKRISIEMAARELRYNWFE-----------KIKEECGAHVI 120
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKYETWK 182
+ + D + + + G + + PL+ + + E +
Sbjct: 121 AVAHHQDDS----------VETMLLNLIRGTGITGLLGIRPRNGAIVRPLLCINREEIIR 170
Query: 183 LAQDIGGQDLVN 194
Q IG + +
Sbjct: 171 YLQQIGQDFVTD 182
>gi|239908960|ref|YP_002955702.1| hypothetical protein DMR_43250 [Desulfovibrio magneticus RS-1]
gi|239798827|dbj|BAH77816.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 355
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
K+ AL LFSGG DS + V L F
Sbjct: 2 KSYHALALFSGGLDSILAAKTIAAQGLDVLCLHF 35
>gi|303290410|ref|XP_003064492.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454090|gb|EEH51397.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 203
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELE----CR 53
+DI+++ + SGG DS L + D V L ++G+R+ E E
Sbjct: 12 HDIVRRGDVVVACVSGGPDSVALLHLLRELSDEWNLAVHVLHCNHGKRSASEEEETFVVE 71
Query: 54 LCVRKKIVELMPKWKDSLGEDH 75
+C R + + + + G H
Sbjct: 72 MCERLGVDVHVRRPEAPWGSSH 93
>gi|182680532|ref|YP_001834678.1| tRNA(Ile)-lysidine synthetase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636415|gb|ACB97189.1| tRNA(Ile)-lysidine synthetase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 400
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 59/199 (29%), Gaps = 52/199 (26%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE------TLSFDYGQRNKVELECRLCVR 57
++ A LL SGG DS + A + V S D+G R E
Sbjct: 78 PLEHARKVLLAVSGGPDSVALMLLAAQWAEAVWKAPPLSVASVDHGLRPDSLAEA----- 132
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
E + +W LG H + L G+ + L + R + +
Sbjct: 133 ----EQVAEWAARLGLPHHI-LRWEGEKPKTRLQERAR-------------DARYGLLI- 173
Query: 118 FAATLAYRLGITNIVIGVCETD-----------YSGYPDCRHDTIRAIETAINLGMESHV 166
A +G +V D SG ++ +E+ G H
Sbjct: 174 ---AHAETIGADYLVTAHHADDQAETILFRLLRGSG-----PRGLKGMESLFQRGELLHA 225
Query: 167 TVHTPLMWLKKYETWKLAQ 185
PL+ + K E +
Sbjct: 226 R---PLLGMTKAELLAICD 241
>gi|170017521|ref|YP_001728440.1| argininosuccinate synthase [Leuconostoc citreum KM20]
gi|229889880|sp|B1MZP4|ASSY_LEUCK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|169804378|gb|ACA82996.1| Argininosuccinate synthase [Leuconostoc citreum KM20]
Length = 410
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK 47
+L +SGG D+S + W ++ V + + GQ K
Sbjct: 1 MTEKLVLAYSGGLDTSVAIPWLKEKGYDVIAVVLNVGQHGK 41
>gi|116327008|ref|YP_796728.1| argininosuccinate synthase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332326|ref|YP_802044.1| argininosuccinate synthase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122279947|sp|Q04P84|ASSY_LEPBJ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|122285144|sp|Q056F0|ASSY_LEPBL RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|116119752|gb|ABJ77795.1| Argininosuccinate synthase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116126015|gb|ABJ77286.1| Argininosuccinate synthase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 403
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK 47
K +L +SGG D+S L+W + + V + D GQ+ +
Sbjct: 5 KPVKKIVLAYSGGLDTSVILTWLKETYGCEVIAFTADVGQKEE 47
>gi|73662449|ref|YP_301230.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|123642746|sp|Q49Y59|MNMA_STAS1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|72494964|dbj|BAE18285.1| putative tRNA methyltransferase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 370
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDTRVVVGMSGGVDSSVTAHILKEQGYDVIGI 35
>gi|57640128|ref|YP_182606.1| GMP synthase subunit B [Thermococcus kodakarensis KOD1]
gi|62286909|sp|Q5JFM1|GUAAB_PYRKO RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|57158452|dbj|BAD84382.1| GMP synthase, PP-loop-ATPase component [Thermococcus kodakarensis
KOD1]
Length = 307
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 29/187 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSST A DR+ + + G K E E + + L +
Sbjct: 21 KAIIALSGGVDSSTAAVLAHRAIGDRLHAVFVNTGFMRKGEPEFVVKTFRDEFGLNLHYV 80
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D+ ++ + + I GR +F+ +A +
Sbjct: 81 DA-------SERFFRELKGVTDPEEKRKII-----------GR--VFIEVFEEVAKEINA 120
Query: 129 TNIVIGVCETDYSGYPDC--RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
++ G PD H I++ L ++ + PL L K E +LA++
Sbjct: 121 DFLIQGTIA------PDWIESHGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVRELAKE 174
Query: 187 IGGQDLV 193
+G + +
Sbjct: 175 LGLPEKI 181
>gi|45659143|ref|YP_003229.1| argininosuccinate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|47605392|sp|P61524|ASSY_LEPIC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|45602389|gb|AAS71866.1| argininosuccinate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 403
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK 47
K +L +SGG D+S L+W D + V + D GQ+ +
Sbjct: 3 QNKPVKKIVLAYSGGLDTSVILTWLKDTYGCEVIAFTADIGQKEE 47
>gi|24216865|ref|NP_714346.1| argininosuccinate synthase [Leptospira interrogans serovar Lai
str. 56601]
gi|30172845|sp|Q8EYP7|ASSY_LEPIN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|24198242|gb|AAN51364.1|AE011570_7 argininosuccinate synthase [Leptospira interrogans serovar Lai
str. 56601]
Length = 403
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK 47
K +L +SGG D+S L+W D + V + D GQ+ +
Sbjct: 3 QNKPVKKIVLAYSGGLDTSVILTWLKDTYGCEVIAFTADIGQKEE 47
>gi|325282766|ref|YP_004255307.1| Argininosuccinate synthase [Deinococcus proteolyticus MRP]
gi|324314575|gb|ADY25690.1| Argininosuccinate synthase [Deinococcus proteolyticus MRP]
Length = 420
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVE 62
+ + +L +SGG D+S + W +R V + D GQ +V+ +R +
Sbjct: 1 MTQREKIVLAYSGGLDTSIIIKWLQQERGYDVVAFTADLGQGAEVDEAREKAIRTGAVSA 60
Query: 63 LMPKWKDSLGEDHILPL 79
++ D++ P+
Sbjct: 61 YALDLREEFVRDYVFPM 77
>gi|312136844|ref|YP_004004181.1| asparagine synthase (glutamine-hydrolyzing) [Methanothermus
fervidus DSM 2088]
gi|311224563|gb|ADP77419.1| asparagine synthase (glutamine-hydrolyzing) [Methanothermus
fervidus DSM 2088]
Length = 471
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 21/144 (14%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + A L+FSGG DS T L+ LD++ V+ + G +L+ L K +
Sbjct: 219 VEKRTRDIDKAALVFSGGVDS-TLLAILLDKYIDVKLYTV--GVPGSQDLKFALKAAKDL 275
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
+ K + +L I + + +P L A+
Sbjct: 276 DMELKVLKIEKDVVKEMLPKVLTAI------EEYNIMKIGVAMP-----------LYIAS 318
Query: 121 TLAYRLGITNIVIGVCETD-YSGY 143
A G I G + ++GY
Sbjct: 319 AAASSDGYKVIFSGQGADELFAGY 342
>gi|291550046|emb|CBL26308.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruminococcus torques L2-14]
Length = 358
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 18/44 (40%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR 53
++ SGG DSS ++ V ++ Q + E++
Sbjct: 5 KVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEENEVQEE 48
>gi|260592846|ref|ZP_05858304.1| tRNA(Ile)-lysidine synthase [Prevotella veroralis F0319]
gi|260535216|gb|EEX17833.1| tRNA(Ile)-lysidine synthase [Prevotella veroralis F0319]
Length = 461
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 24/139 (17%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++K L+ SGG DS L + + C +R
Sbjct: 13 QLLKPKAHCLVALSGGADSVALLLTMRQLGYETDAVH------------CNFHLRGDESN 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ SL + +PL I + + + V++++ L + F
Sbjct: 61 RDEEYCQSLCKQLNIPLHIAHFDTLTYAEAHKVSIEMAARELRYRY-------FFQLK-- 111
Query: 122 LAYRLGITNIVIGVCETDY 140
LG I +G + D
Sbjct: 112 --EALGADAICVGHHQEDS 128
>gi|148377398|ref|YP_001256274.1| thiamine biosynthesis protein thiI [Mycoplasma agalactiae PG2]
gi|238686659|sp|A5IXS0|THII_MYCAP RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|148291444|emb|CAL58829.1| Thiamine biosynthesis protein thiI [Mycoplasma agalactiae PG2]
Length = 378
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 31/182 (17%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS + R +V LSF + KI +L+ G+
Sbjct: 171 LMSGGIDSPVAAFKLMKRGLKVSFLSF------ISPPQTDEKTIGKIKDLVSVLSKYQGK 224
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---FLVFAATLAYRLGITN 130
H+ +++ S T N + +I N++ F A+ A I
Sbjct: 225 SHLYLANYSKLMNYISFTSNESYRI-------------NLMRRSFYRIASKFAKGKNIMT 271
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+ G + + IE+ + S + + PL+ K ET +A+ I
Sbjct: 272 LSNGENLGQVAS---------QTIESLSTIASASDLLILRPLIANDKVETINIAKQIKTY 322
Query: 191 DL 192
D+
Sbjct: 323 DI 324
>gi|305666262|ref|YP_003862549.1| argininosuccinate synthase [Maribacter sp. HTCC2170]
gi|88708253|gb|EAR00490.1| argininosuccinate synthase [Maribacter sp. HTCC2170]
Length = 396
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 16/128 (12%)
Query: 10 SALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPK 66
+L +SGG D+S C + ++ V +S + G +K E+ +
Sbjct: 3 KVVLAYSGGLDTSYCAKYLSKEKGYEVHAVSVNTGGFSKEEISEINSKAIELGATTYTSI 62
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ D ++ I G++ + T +++ + V N A ++
Sbjct: 63 DAVQIFYDKVVKYLIFGNVLKN-NTYPLSVSAERIVQAIEIV---N---------HAKKM 109
Query: 127 GITNIVIG 134
G I G
Sbjct: 110 GADYIAHG 117
>gi|330898577|gb|EGH29996.1| argininosuccinate synthase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 267
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|297182186|gb|ADI18357.1| argininosuccinate synthase [uncultured actinobacterium
HF4000_04C13]
Length = 419
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPK 66
+L +SGG D+S L W + + V T + D GQ ++E + E+ +
Sbjct: 18 DKVVLAYSGGLDTSVILRWLEEEYGCEVVTFTADLGQGEELEPARAKAEAMGVSEIYIED 77
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D++ P+ + ++
Sbjct: 78 LREEFVRDYVFPMFRANALYEGEYLLGTSIA 108
>gi|315231792|ref|YP_004072228.1| GMP synthase (glutamine-hydrolyzing) [Thermococcus barophilus MP]
gi|315184820|gb|ADT85005.1| GMP synthase (glutamine-hydrolyzing) [Thermococcus barophilus MP]
Length = 307
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
A++ SGG DSST A D++ + + G
Sbjct: 21 KAIIALSGGVDSSTAAILAHKAIGDKLYAVFVNTG 55
>gi|332184534|gb|AEE26788.1| Asparagine synthetase (glutamine-hydrolyzing) [Francisella cf.
novicida 3523]
Length = 621
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 15 FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+T ++ D++ T S + Q+ E E V K I
Sbjct: 270 LSGGIDSTTIVALMQSMSKDKINTFSIGFNQKEYNEAEHARAVAKHI 316
>gi|294084987|ref|YP_003551747.1| argininosuccinate synthase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664562|gb|ADE39663.1| Argininosuccinate synthase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 411
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
M ++ K +L +SGG D+S L W D + V T + D GQ +E
Sbjct: 1 MTCLMSKQDIKKVVLAYSGGLDTSVILRWLQDHYNAEVVTFTADIGQGEDIEPARAKAEL 60
Query: 58 KKIVEL-MPKWKDSLGEDHILPL 79
I ++ + ++ D++ P+
Sbjct: 61 MGIKQIYIEDLREEFVRDYVFPM 83
>gi|193216506|ref|YP_001999748.1| thiamine biosynthesis protein ThiI [Mycoplasma arthritidis 158L3-1]
gi|238692471|sp|B3PLZ2|THII_MYCA5 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|193001829|gb|ACF07044.1| thiamine biosynthesis protein [Mycoplasma arthritidis 158L3-1]
Length = 381
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 68/190 (35%), Gaps = 27/190 (14%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS R R+ L+F E ++++++ K++ S
Sbjct: 173 LMSGGIDSPVAAYLLQKRGLRINFLNFITPPHTD---EKTTQKVDELIKVIAKYQGSAKL 229
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ I+ I S K + ++ + F A LA +L I +
Sbjct: 230 YQVNFTDIMNYIGLVSNQKYKIILMRRS-------------FYRIAQMLAKKLHIKALSN 276
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
G + T+ AI T + + PL+ K ET K+A+ IG +
Sbjct: 277 GENLAQVAS------QTLEAIHTVSAPIT---LPIFRPLLSFDKNETIKIAEKIGTMPIS 327
Query: 194 NLILEESHTC 203
IL+ TC
Sbjct: 328 --ILKACETC 335
>gi|195952861|ref|YP_002121151.1| argininosuccinate synthase [Hydrogenobaculum sp. Y04AAS1]
gi|195932473|gb|ACG57173.1| Argininosuccinate synthase [Hydrogenobaculum sp. Y04AAS1]
Length = 402
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
A +L +SGG D+S + W +R V T + D GQ+ ++ E+ + + ++
Sbjct: 1 MAKRVILAYSGGLDTSIIVRWLTERGFEVMTYTADVGQKEELSEIPEKARKAGAVEAIVE 60
Query: 66 KWKDSLGEDHILP 78
++ +D LP
Sbjct: 61 DIREEFVKDFCLP 73
>gi|71908644|ref|YP_286231.1| argininosuccinate synthase [Dechloromonas aromatica RCB]
gi|119361268|sp|Q47BM0|ASSY_DECAR RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|71848265|gb|AAZ47761.1| argininosuccinate synthase [Dechloromonas aromatica RCB]
Length = 468
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ ++E R K ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDVYKCEVVTFTADLGQGEELE-PARAKALKAGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ D + E+ +
Sbjct: 60 KNIYIDDVREEFVRD 74
>gi|46579504|ref|YP_010312.1| hypothetical protein DVU1091 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448918|gb|AAS95571.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233318|gb|ADP86172.1| Thiamine biosynthesis protein-like protein [Desulfovibrio
vulgaris RCH1]
Length = 368
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ L SGG DS + ++ RV+ L F
Sbjct: 8 AVALLSGGLDSILAVKLVEEQGLRVKCLHF 37
>gi|322517352|ref|ZP_08070227.1| thiamine biosynthesis protein ThiI [Streptococcus vestibularis ATCC
49124]
gi|322124049|gb|EFX95602.1| thiamine biosynthesis protein ThiI [Streptococcus vestibularis ATCC
49124]
Length = 407
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 175 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|322372325|ref|ZP_08046861.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sp. C150]
gi|321277367|gb|EFX54436.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sp. C150]
Length = 407
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 175 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|313899439|ref|ZP_07832949.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Clostridium sp. HGF2]
gi|312955727|gb|EFR37385.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Clostridium sp. HGF2]
Length = 430
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
K LL SGG DSS + L ++ + ++G K E E + V K
Sbjct: 134 KDRKVLLALSGGVDSSVVAALLLKAIGKQLYCVHVNHGLMRKGESESVIEVFK 186
>gi|312277817|gb|ADQ62474.1| Probable tRNA sulfurtransferase [Streptococcus thermophilus ND03]
Length = 407
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 175 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|312864260|ref|ZP_07724494.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
vestibularis F0396]
gi|311100261|gb|EFQ58470.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
vestibularis F0396]
Length = 407
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 175 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|312865200|ref|ZP_07725428.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
downei F0415]
gi|311099311|gb|EFQ57527.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
downei F0415]
Length = 408
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 177 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 213
>gi|307128612|ref|YP_003880642.1| putative argininosuccinate synthase/acetyltransferase activity of
N-acetylglutamate synthase [Candidatus Sulcia muelleri
CARI]
gi|306483074|gb|ADM89944.1| putative argininosuccinate synthase/acetyltransferase activity of
N-acetylglutamate synthase [Candidatus Sulcia muelleri
CARI]
Length = 578
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K LL +SGG D+S CL + ++ +V T+ + G N +LE I L
Sbjct: 186 KGDKILLAYSGGLDTSFCLKYLINEGYKVITIIINTGGFNNKDLESIEKKAINIGALYH 244
>gi|303229103|ref|ZP_07315905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella atypica ACS-134-V-Col7a]
gi|302516227|gb|EFL58167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella atypica ACS-134-V-Col7a]
Length = 353
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 68/201 (33%), Gaps = 52/201 (25%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF-------DYGQRNKVELECRLCVRKKIVELMP 65
+ SGG DSS + L + +V ++ Y E+ + KK+ + +
Sbjct: 7 VAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPY-----DEVPLAVTDAKKMCDFLG 61
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFLVF 118
E HI+ D+ + ++ + PN P +NI + L
Sbjct: 62 I------EHHIID---ARDVFYENVVDYFVKEYAYGRTPN---PCVFCNKNIKFDLMLNR 109
Query: 119 AATLAYRLGITNIVIGVCE-----TDYSGY-----PDCRHDTIRAIETAINLGMESHV-- 166
A LG T++V G D Y D D ++ + M +
Sbjct: 110 AL----ELGATHMVTGHYAQVNYNEDTGLYELHKGVDPTKD-----QSYVMYNMNQRILS 160
Query: 167 TVHTPLMWLKKYETWKLAQDI 187
+ PL K ET KLA +
Sbjct: 161 HIMFPLGGQCKTETRKLAAEY 181
>gi|228477921|ref|ZP_04062535.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
salivarius SK126]
gi|228250411|gb|EEK09651.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
salivarius SK126]
Length = 407
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 175 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|242310240|ref|ZP_04809395.1| argininosuccinate synthase [Helicobacter pullorum MIT 98-5489]
gi|239523537|gb|EEQ63403.1| argininosuccinate synthase [Helicobacter pullorum MIT 98-5489]
Length = 407
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK 58
M+ K ++L +SGG D+S L W D + V T + D GQ +VE R K
Sbjct: 1 MSQENAKNIKKVVLAYSGGLDTSVILKWLGDTYGCEVVTFTADIGQGEEVE-PAREKALK 59
Query: 59 KIVELMPKWKDSLGEDHILP 78
++ + + L E+ I
Sbjct: 60 LGIKPQNIFIEDLREEFIRD 79
>gi|218281120|ref|ZP_03487655.1| hypothetical protein EUBIFOR_00214 [Eubacterium biforme DSM 3989]
gi|218217634|gb|EEC91172.1| hypothetical protein EUBIFOR_00214 [Eubacterium biforme DSM 3989]
Length = 385
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 10/28 (35%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET 37
L+ SGG DS+ + V
Sbjct: 2 KVLVGLSGGVDSAVAAYLLKKQGYDVTC 29
>gi|156974113|ref|YP_001445020.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio harveyi ATCC BAA-1116]
gi|166235090|sp|A7MSW1|MNMA_VIBHB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|156525707|gb|ABU70793.1| hypothetical protein VIBHAR_01824 [Vibrio harveyi ATCC BAA-1116]
Length = 374
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLKQQGYQVEGL 36
>gi|120602947|ref|YP_967347.1| thiamine biosynthesis protein [Desulfovibrio vulgaris DP4]
gi|120563176|gb|ABM28920.1| thiamine biosynthesis protein [Desulfovibrio vulgaris DP4]
Length = 368
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ L SGG DS + ++ RV+ L F
Sbjct: 8 AVALLSGGLDSILAVKLVEEQGLRVKCLHF 37
>gi|55820500|ref|YP_138942.1| thiamine biosynthesis protein ThiI [Streptococcus thermophilus LMG
18311]
gi|55736485|gb|AAV60127.1| thiamine biosynthesis protein [Streptococcus thermophilus LMG
18311]
Length = 407
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 175 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|116627313|ref|YP_819932.1| thiamine biosynthesis protein ThiI [Streptococcus thermophilus
LMD-9]
gi|116100590|gb|ABJ65736.1| Thiamine biosynthesis ATP pyrophosphatase [Streptococcus
thermophilus LMD-9]
Length = 407
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 175 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|77464237|ref|YP_353741.1| cell cycle protein [Rhodobacter sphaeroides 2.4.1]
gi|77388655|gb|ABA79840.1| Probable cell cycle protein [Rhodobacter sphaeroides 2.4.1]
Length = 412
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL----CVRKKIVELMPKWKDS 70
SGG DS L A + ++ D+G R + E R C + + +W+
Sbjct: 23 VSGGGDSMALLHLAAEAGIATRAVTVDHGLRPEAADEARAVGRVCADLGVPHDILRWEGW 82
Query: 71 LGEDHILP------LAILGDISHSSLTKNVAMKIQDNNLPNTF 107
G +++ L ++ + + + VA+ +++ TF
Sbjct: 83 DGRGNLMDQARRARLRLIAGWARGAGLEAVALGHTRDDVAETF 125
>gi|224436863|ref|ZP_03657852.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter cinaedi CCUG
18818]
gi|313143341|ref|ZP_07805534.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter cinaedi CCUG 18818]
gi|313128372|gb|EFR45989.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter cinaedi CCUG 18818]
Length = 346
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 57/195 (29%), Gaps = 37/195 (18%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
LL SGG DSS C L + V L Y + + E K ++ +
Sbjct: 2 KKVALLMSGGVDSSYCAHLLLSQGYEVIGL---YLKLHDKE-----KKHKIYIKNCEQVA 53
Query: 69 DSLGE-DHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LVFAATLAYR 125
LG +L L + + K+ N N + A
Sbjct: 54 SQLGIRFEVLDLREEFKKNVYDAFVKSYKAGQTPNPCAVC-----NPLMKFGLGLQKADE 108
Query: 126 LGITNIVIGVCET--DYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PL 172
LG I G + +G I+ I A++ + ++ PL
Sbjct: 109 LGCDFIATGHYAQIKEING--------IKRIAKALDDTKDQSYFLYALPQSAIDRIIFPL 160
Query: 173 MWLKKYETWKLAQDI 187
K E K A +
Sbjct: 161 GTFTKEEVKKTALKL 175
>gi|149376491|ref|ZP_01894252.1| thiamine biosynthesis protein ThiI [Marinobacter algicola DG893]
gi|149359158|gb|EDM47621.1| thiamine biosynthesis protein ThiI [Marinobacter algicola DG893]
Length = 484
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 57/188 (30%), Gaps = 27/188 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ + L SGG DSS + R R L F G E+ R V
Sbjct: 179 ETVMTLVSGGYDSSVAAYLMMRRGLRSHFLFFSLGGPAH-EIGVRQVVHYLWDRYGASHG 237
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ ++ +I S ++ + ++ L A+ +A
Sbjct: 238 AKFIS--VPFEGVVAEIMRSVNQRHWGVVLKRQ-------------MLKAASDIAAANNA 282
Query: 129 TNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+V G S + + + S+ V PL+ + K +A+DI
Sbjct: 283 AGLVTGDAVAQVSS----------QTLSNLNVVDRASNEVVLRPLISMDKETIINIARDI 332
Query: 188 GGQDLVNL 195
G +
Sbjct: 333 GTEPFART 340
>gi|118475361|ref|YP_892864.1| thiamine biosynthesis protein:ExsB [Campylobacter fetus subsp.
fetus 82-40]
gi|118414587|gb|ABK83007.1| thiamine biosynthesis protein:ExsB [Campylobacter fetus subsp.
fetus 82-40]
Length = 329
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
L LFSGG DS + + V L+ D G
Sbjct: 1 MNKKCLALFSGGLDSMLAIKLISSQGIEVHALNIDIG 37
>gi|90417011|ref|ZP_01224940.1| argininosuccinate synthase [marine gamma proteobacterium
HTCC2207]
gi|90331358|gb|EAS46602.1| argininosuccinate synthase [marine gamma proteobacterium
HTCC2207]
Length = 405
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W + + V T + D GQ +VE + E+
Sbjct: 1 MSSVNKVVLAYSGGLDTSVIVKWLQEEYNCEVVTFTADIGQGEEVEPARAKAEALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIDDLREEYARDFVFPMFRANTIYEGEYLLGTSIA 95
>gi|120555499|ref|YP_959850.1| argininosuccinate synthase [Marinobacter aquaeolei VT8]
gi|166220988|sp|A1U3U4|ASSY_MARAV RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|120325348|gb|ABM19663.1| argininosuccinate synthase [Marinobacter aquaeolei VT8]
Length = 403
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W D + V T + D GQ +VE + E+
Sbjct: 1 MSDIKKVVLAYSGGLDTSVIVRWLQDTYNCEVVTFTADIGQGEEVEPARAKAEALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 YIEDLREEFVRDYVFPMFRANTIYEGEYLLGTSIA 95
>gi|124268750|ref|YP_001022754.1| tRNA-specific 2-thiouridylase MnmA [Methylibium petroleiphilum
PM1]
gi|166234857|sp|A2SLT0|MNMA_METPP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|124261525|gb|ABM96519.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylibium petroleiphilum PM1]
Length = 396
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DS+ + V L
Sbjct: 1 MSAKKERVVVGLSGGVDSAVSAWLLKQQGHEVVGL 35
>gi|307594357|ref|YP_003900674.1| argininosuccinate synthase [Vulcanisaeta distributa DSM 14429]
gi|307549558|gb|ADN49623.1| argininosuccinate synthase [Vulcanisaeta distributa DSM 14429]
Length = 410
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 16/134 (11%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK-VELECRLCVRKKI 60
+ +K L +SGG D++ + W ++F V T++ D GQ + ++E R I
Sbjct: 12 PVHRKPSKIALAYSGGLDTTVAIHWLREKFNAEVITVTVDVGQDDDFRDIEERAYKAGAI 71
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
K E + + + A+ V
Sbjct: 72 KHYTIDAKRDFAEGPVAMAIMANALYEDRYPLGTALARPLIAEKVVEV------------ 119
Query: 121 TLAYRLGITNIVIG 134
A R G I G
Sbjct: 120 --AKREGCDAIAHG 131
>gi|254788130|ref|YP_003075559.1| asparagine synthase family protein [Teredinibacter turnerae T7901]
gi|237683896|gb|ACR11160.1| asparagine synthase family protein [Teredinibacter turnerae T7901]
Length = 432
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 3 DIIKKAPSA----LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
D IK A +A + SGG DSST +A ++ D G E ++ +
Sbjct: 152 DCIKAAENAGYTVFVALSGGLDSSTMAHYAKRFCANPIAVTLDLGGSEDAEKAQKIAAQL 211
Query: 59 KIVE 62
I
Sbjct: 212 AIRH 215
>gi|171769481|sp|A7GYN4|ASSY_CAMC5 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
Length = 406
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+KK ++L +SGG D+S L W D + V T + D GQ ++E + + +
Sbjct: 1 MKKDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELEPARKKALALGVKP 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 ENIFIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|121535962|ref|ZP_01667756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermosinus carboxydivorans Nor1]
gi|121305454|gb|EAX46402.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermosinus carboxydivorans Nor1]
Length = 364
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVE 62
+ P ++ SGG DSS + + + V ++ + + E+ E R C V
Sbjct: 1 MGAKPRVVVAMSGGVDSSLTAALLVHQGYDVIGVTMQIWENDLPEIDPEHRGCCSLSAVN 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+ D LG + + ++ ++ + PN
Sbjct: 61 DARRVADKLGIPYYV--LNFREMFQETVVDYFIREYAAGKTPN 101
>gi|118576679|ref|YP_876422.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Cenarchaeum symbiosum A]
gi|118195200|gb|ABK78118.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Cenarchaeum symbiosum A]
Length = 336
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
M + K + L SGG DS + + V ++
Sbjct: 1 MAEP--KKKKVVALLSGGLDSQLAVKMMQKQGFEVSAVAI 38
>gi|157165398|ref|YP_001466810.1| argininosuccinate synthase [Campylobacter concisus 13826]
gi|166219956|sp|A7ZDF2|ASSY_CAMC1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|112801272|gb|EAT98616.1| argininosuccinate synthase [Campylobacter concisus 13826]
Length = 407
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+KK ++L +SGG D+S L W D + V T + D GQ ++E + + +
Sbjct: 1 MKKDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELEPARKKALALGVKP 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 ENIFIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIA 98
>gi|57238956|ref|YP_180092.1| tRNA-specific 2-thiouridylase MnmA [Ehrlichia ruminantium str.
Welgevonden]
gi|58578889|ref|YP_197101.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia ruminantium str. Welgevonden]
gi|81557340|sp|Q5HBV2|MNMA_EHRRW RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|57161035|emb|CAH57941.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia ruminantium str. Welgevonden]
gi|58417515|emb|CAI26719.1| Probable tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia ruminantium str. Welgevonden]
Length = 370
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 21/190 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC------VRKKI 60
+ +A++ SGG DSS + +V ++ Y N + C K++
Sbjct: 18 STTAVVAMSGGVDSSVAAALLHKLGYKVIGITLQLYNNNNNSNTKGACCGSLDTQDAKQV 77
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
M +L + + ++ D + + N + R+++
Sbjct: 78 ASSMGFPHYTLNYEKVFREEVIEDFIDTYTQGKTPIPCIKCNQ---VIKFRDLLNAT--- 131
Query: 121 TLAYRLGITNIVIGV----CETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWL 175
LG +V G E D Y DT + + + + PL
Sbjct: 132 ---KSLGADVLVTGHYIRKIEQDDDIYVYSSKDTKKDQSYFLFATTVEQLRLLRFPLGNF 188
Query: 176 KKYETWKLAQ 185
K + KLA+
Sbjct: 189 HKEDIRKLAK 198
>gi|297203498|ref|ZP_06920895.1| predicted protein [Streptomyces sviceus ATCC 29083]
gi|297148430|gb|EDY58507.2| predicted protein [Streptomyces sviceus ATCC 29083]
Length = 440
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 21/67 (31%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DS+T A + T + R + +++ + S G
Sbjct: 62 LSGGMDSTTLCFVAAAEGADLLTYHVEPLDRANEDARWARLAAERLTDARHLTVPSQGAS 121
Query: 75 HILPLAI 81
L +
Sbjct: 122 SWFDLPV 128
>gi|257125929|ref|YP_003164043.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Leptotrichia buccalis C-1013-b]
gi|257049868|gb|ACV39052.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Leptotrichia buccalis C-1013-b]
Length = 364
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+++ +L SGG DSS ++ V +
Sbjct: 1 MERRKKVVLGMSGGVDSSVAAILLKEQGYDVIGV 34
>gi|255620457|ref|XP_002540114.1| argininosuccinate synthase, putative [Ricinus communis]
gi|223499083|gb|EEF22268.1| argininosuccinate synthase, putative [Ricinus communis]
Length = 105
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ KK +L +SGG D+S L W + V T + + GQ ELE +++
Sbjct: 31 PMSKKLKKVVLAYSGGLDTSIILKWLQQTYGCEVVTFTANLGQ--GEELEPARRKAEQLG 88
Query: 62 ELMPKWKD 69
+ +D
Sbjct: 89 ATDIRIED 96
>gi|157363227|ref|YP_001469994.1| argininosuccinate synthase [Thermotoga lettingae TMO]
gi|187470633|sp|A8F446|ASSY_THELT RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|157313831|gb|ABV32930.1| Argininosuccinate synthase [Thermotoga lettingae TMO]
Length = 425
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRL 54
+L +SGG D+S L W ++ V + GQ+ +EC+
Sbjct: 2 KKVILAYSGGLDTSVILKWLSEKGFEVIAFVANLGQKEDFKAIECKA 48
>gi|78777588|ref|YP_393903.1| hypothetical protein Suden_1391 [Sulfurimonas denitrificans DSM
1251]
gi|78498128|gb|ABB44668.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
1251]
Length = 260
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 32/146 (21%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR------FDRVETLSFDYGQRNKVELECRLCV 56
++I++ L+ SGG+DS T + ++ ++ YG E C
Sbjct: 29 NLIEEGDKILVGLSGGKDSLTLIHALKEQQRRAPFKFEFIAVTISYGMGENYEKLKAHCK 88
Query: 57 RKKIV-ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
KI E+ + ED I + S + ++
Sbjct: 89 EHKIDYEVYDTNIYDIAEDKIRKNSSFCSFF--SRMRRGSL------------------- 127
Query: 116 LVFAATLAYRLGITNIVIGVCETDYS 141
+ A + G + +G D +
Sbjct: 128 ----YSAAQKYGCNKVALGHHMDDAA 149
>gi|313678265|ref|YP_004056005.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
bovis PG45]
gi|312950670|gb|ADR25265.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
bovis PG45]
Length = 378
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 64/182 (35%), Gaps = 31/182 (17%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DS + R RV +SF + KI L+ G+
Sbjct: 171 LMSGGIDSPVAAFELMKRGLRVHFISF------VSPPQTDEKTINKIKSLVSVLSKYQGK 224
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---FLVFAATLAYRLGITN 130
++ +++ S T N A KI N++ F A+ A + I
Sbjct: 225 SNLYLANYSKLMNYISFTSNEAYKI-------------NLMRRSFYRIASKFAKKQNIIV 271
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
+ G + + IE+ + S + + P++ K ET +A+ IG
Sbjct: 272 LSNGENLGQVAS---------QTIESLSTIANASDLLILRPILANDKIETINIAKHIGTY 322
Query: 191 DL 192
D+
Sbjct: 323 DI 324
>gi|89094503|ref|ZP_01167442.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanospirillum sp. MED92]
gi|89081239|gb|EAR60472.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanospirillum sp. MED92]
Length = 371
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 15/139 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKK 59
+++ + ++ SGG DSS + + +VE L +N E + C K+
Sbjct: 4 LSNTDNSSAKVIVGMSGGVDSSVSALLLMQQGYQVEGLFM----KNWDEDDGTEYCTAKE 59
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIF 115
+ D LG L A ++ ++ + + PN P R I F
Sbjct: 60 DLADAQAVCDKLGIH--LHTANFAAEYWDNVFEHFLEEYKAGRTPN---PDILCNREIKF 114
Query: 116 LVFAATLAYRLGITNIVIG 134
F A LG I G
Sbjct: 115 KAF-LEYAVELGADFIATG 132
>gi|322434612|ref|YP_004216824.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidobacterium sp. MP5ACTX9]
gi|321162339|gb|ADW68044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidobacterium sp. MP5ACTX9]
Length = 379
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQR 45
M+D+ + + + SGG DSS + ++ + L+ + QR
Sbjct: 1 MSDLSQIPETIAVAMSGGVDSSAVAALLHEQGYDLIGLTLQLWNQR 46
>gi|229551246|ref|ZP_04439971.1| argininosuccinate synthase [Lactobacillus rhamnosus LMS2-1]
gi|258540996|ref|YP_003175495.1| argininosuccinate synthase [Lactobacillus rhamnosus Lc 705]
gi|229315409|gb|EEN81382.1| argininosuccinate synthase [Lactobacillus rhamnosus LMS2-1]
gi|257152672|emb|CAR91644.1| Argininosuccinate synthase [Lactobacillus rhamnosus Lc 705]
Length = 406
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+L +SGG D+S + W +D+ V + + GQ
Sbjct: 1 MTEKIVLAYSGGLDTSVAIPWLMDKGYEVIAVVLNVGQ 38
>gi|199597668|ref|ZP_03211096.1| Argininosuccinate synthase [Lactobacillus rhamnosus HN001]
gi|258509812|ref|YP_003172563.1| argininosuccinate synthase [Lactobacillus rhamnosus GG]
gi|199591475|gb|EDY99553.1| Argininosuccinate synthase [Lactobacillus rhamnosus HN001]
gi|257149739|emb|CAR88712.1| Argininosuccinate synthase [Lactobacillus rhamnosus GG]
gi|259651075|dbj|BAI43237.1| argininosuccinate synthase [Lactobacillus rhamnosus GG]
Length = 406
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+L +SGG D+S + W +D+ V + + GQ
Sbjct: 1 MTEKIVLAYSGGLDTSVAIPWLMDKGYEVIAVVLNVGQ 38
>gi|114776817|ref|ZP_01451860.1| PP-loop [Mariprofundus ferrooxydans PV-1]
gi|114552903|gb|EAU55334.1| PP-loop [Mariprofundus ferrooxydans PV-1]
Length = 324
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 18/44 (40%)
Query: 16 SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
SGG DS+ L + RV+ D+G R E L K
Sbjct: 26 SGGADSTALLLMLQQQGYRVQAWHVDHGWRESSIKETELLAEKA 69
>gi|74057362|gb|AAZ97802.1| argininosuccinate synthase [Thiobacillus denitrificans ATCC 25259]
Length = 456
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W D + V T + D GQ ++E R + ++
Sbjct: 47 PMSDIKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELE-PARQKALQFGIK 105
Query: 63 LMPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 106 PEQIYIDDLREEFVRD 121
>gi|76801631|ref|YP_326639.1| GMP synthase subunit B [Natronomonas pharaonis DSM 2160]
gi|121695540|sp|Q3IS14|GUAAB_NATPD RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|76557496|emb|CAI49076.1| GMP synthase (glutamine-hydrolyzing), subunit B [Natronomonas
pharaonis DSM 2160]
Length = 305
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 32/182 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+A++ SGG DSST + A + D++ + D G +RK + +
Sbjct: 23 NAVIALSGGVDSSTAAALAYEAIGDQLTPVYVDTG-----------LMRKGETDQIRDTF 71
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D + I+ + S +T + F+ T+A +
Sbjct: 72 DYMDSLRIIDARDRFLDALSGITDPEEKRHAIGEQ-----------FIREFETVARDVDA 120
Query: 129 TNIVIGVCETDYSGYPD--CRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQ 185
+V G + YPD TI++ L + P+ L K E ++A+
Sbjct: 121 DYLVQG------TIYPDRIESEGTIKSHHNVGGLPEVVDFEGIVEPMRDLYKDEVREVAR 174
Query: 186 DI 187
++
Sbjct: 175 EL 176
>gi|325103567|ref|YP_004273221.1| asparagine synthase (glutamine-hydrolyzing) [Pedobacter saltans DSM
12145]
gi|324972415|gb|ADY51399.1| asparagine synthase (glutamine-hydrolyzing) [Pedobacter saltans DSM
12145]
Length = 606
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ SGG DSS + A + D+V+T S + +++ E + + V + +
Sbjct: 256 VFLSGGIDSSLVAAIAASKKDKVKTFSIKFQEKDFDESQYAIQVAEHL 303
>gi|262274515|ref|ZP_06052326.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Grimontia hollisae CIP 101886]
gi|262221078|gb|EEY72392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Grimontia hollisae CIP 101886]
Length = 370
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D + ++ SGG DSS + +VE L
Sbjct: 1 MSD--NSSKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 36
>gi|290580698|ref|YP_003485090.1| putative thiamine biosynthesis protein [Streptococcus mutans
NN2025]
gi|254997597|dbj|BAH88198.1| putative thiamine biosynthesis protein [Streptococcus mutans
NN2025]
Length = 405
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 173 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVNIEAVHF 209
>gi|254490475|ref|ZP_05103661.1| tRNA methyl transferase [Methylophaga thiooxidans DMS010]
gi|224464219|gb|EEF80482.1| tRNA methyl transferase [Methylophaga thiooxydans DMS010]
Length = 350
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + A+ L SGG DS + ++ VE ++F
Sbjct: 1 MARQHKAVALISGGLDSMLAVRVLQEQGIEVEGINF 36
>gi|218283935|ref|ZP_03489803.1| hypothetical protein EUBIFOR_02399 [Eubacterium biforme DSM 3989]
gi|218215514|gb|EEC89052.1| hypothetical protein EUBIFOR_02399 [Eubacterium biforme DSM 3989]
Length = 394
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 40/117 (34%), Gaps = 14/117 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DS L + + +Y +++ + + K E
Sbjct: 3 KCVVACSGGPDSMALLDQLNKQGKDIVVAHVNY--KHRDTADRDENIVKDYCEKYDIPVR 60
Query: 70 SLGEDHI----------LPLAILGDISHSSLTKNVAMKIQDNNLPNTFV--PGRNII 114
H + A +++ + K + + Q +++ T++ RN+I
Sbjct: 61 VCYPVHEKGNFQAWARDVRYAFFEEVADAFDAKILYVAHQMDDVIETYLFQKNRNMI 117
>gi|24379297|ref|NP_721252.1| thiamine biosynthesis protein ThiI [Streptococcus mutans UA159]
gi|44888488|sp|Q8DUR1|THII_STRMU RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|24377218|gb|AAN58558.1|AE014926_1 putative thiamine biosynthesis protein [Streptococcus mutans UA159]
Length = 405
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 173 PVGTAGKGMLMLSGGIDSPVAGYLALKRGVNIEAVHF 209
>gi|331266672|ref|YP_004326302.1| thiamine biosynthesis/tRNA modification protein ThiI (Thiamine
biosynthesis ATP pyrophosphatase) [Streptococcus oralis
Uo5]
gi|326683344|emb|CBZ00962.1| thiamine biosynthesis/tRNA modification protein ThiI (Thiamine
biosynthesis ATP pyrophosphatase) [Streptococcus oralis
Uo5]
Length = 404
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + +L+ SGG DS AL R +E + F
Sbjct: 173 PVGSSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|323698299|ref|ZP_08110211.1| argininosuccinate synthase [Desulfovibrio sp. ND132]
gi|323458231|gb|EGB14096.1| argininosuccinate synthase [Desulfovibrio desulfuricans ND132]
Length = 410
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVE 62
++K +L +SGG D+S L W + +D V ++ D GQ ++ +E + +
Sbjct: 1 MQKIDKVVLAYSGGLDTSIILKWLKNNYDCDVICMTADLGQGEEMHGIEAKALKTGAVKA 60
Query: 63 LMPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 YVEDLREEFVRDYVFPM 77
>gi|322376896|ref|ZP_08051389.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sp. M334]
gi|321282703|gb|EFX59710.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sp. M334]
Length = 404
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + +L+ SGG DS AL R +E + F
Sbjct: 173 PVGSSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|322374568|ref|ZP_08049082.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sp. C300]
gi|321280068|gb|EFX57107.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sp. C300]
Length = 404
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + +L+ SGG DS AL R +E + F
Sbjct: 173 PVGSSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|315612901|ref|ZP_07887812.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sanguinis ATCC 49296]
gi|315315011|gb|EFU63052.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sanguinis ATCC 49296]
Length = 404
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + +L+ SGG DS AL R +E + F
Sbjct: 173 PVGSSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|307709191|ref|ZP_07645650.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis SK564]
gi|307620137|gb|EFN99254.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis SK564]
Length = 404
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + +L+ SGG DS AL R +E + F
Sbjct: 173 PVGSSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|306829244|ref|ZP_07462434.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis ATCC 6249]
gi|304428330|gb|EFM31420.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis ATCC 6249]
Length = 404
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + +L+ SGG DS AL R +E + F
Sbjct: 173 PVGSSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|295099800|emb|CBK88889.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium cylindroides T2-87]
Length = 386
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET 37
L+ SGG DS+ ++ V
Sbjct: 2 KVLVGLSGGVDSAVAAYLLKEQGYDVTC 29
>gi|293365132|ref|ZP_06611849.1| thiamine biosynthesis protein ThiI [Streptococcus oralis ATCC
35037]
gi|307702163|ref|ZP_07639123.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
oralis ATCC 35037]
gi|291316582|gb|EFE57018.1| thiamine biosynthesis protein ThiI [Streptococcus oralis ATCC
35037]
gi|307624176|gb|EFO03153.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
oralis ATCC 35037]
Length = 404
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + +L+ SGG DS AL R +E + F
Sbjct: 173 PVGSSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|255283411|ref|ZP_05347966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bryantella formatexigens DSM 14469]
gi|255266059|gb|EET59264.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bryantella formatexigens DSM 14469]
Length = 357
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKKKVVVGMSGGVDSSVAAWLLKEQGYDVVGVT 33
>gi|213420831|ref|ZP_03353897.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 321
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 20/133 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
I L L SGG DSS + R RV F+ G +I
Sbjct: 173 PIGTQEDVLSLISGGFDSSVSSYMLMRRGCRVHYCFFNLG-----------GAAHEIGVR 221
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ + G H + I+ + + K+ D + V R + + A+
Sbjct: 222 QVAHYLWNRFGSSHRVR---FVAINFEPVVGEILEKVDDGQMG--VVLKR--MMVRAASK 274
Query: 122 LAYRLGITNIVIG 134
+A R G+ +V G
Sbjct: 275 VAERYGVQALVTG 287
>gi|77460738|ref|YP_350245.1| argininosuccinate synthase [Pseudomonas fluorescens Pf0-1]
gi|119361310|sp|Q3K7K0|ASSY_PSEPF RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|77384741|gb|ABA76254.1| argininosuccinate synthase [Pseudomonas fluorescens Pf0-1]
Length = 405
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|16124384|ref|NP_418948.1| argininosuccinate synthase [Caulobacter crescentus CB15]
gi|221233067|ref|YP_002515503.1| argininosuccinate synthase [Caulobacter crescentus NA1000]
gi|24211528|sp|Q9ABU1|ASSY_CAUCR RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|254807515|sp|B8GXL9|ASSY_CAUCN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|13421238|gb|AAK22116.1| argininosuccinate synthase [Caulobacter crescentus CB15]
gi|220962239|gb|ACL93595.1| argininosuccinate synthase [Caulobacter crescentus NA1000]
Length = 408
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE-- 62
K +L +SGG D+S L W + V T + D GQ ++E + +
Sbjct: 4 KSVKKVVLAYSGGLDTSIILKWLQTEYGAEVITFTADLGQGEEIEPARAKALAAGVKPEN 63
Query: 63 -LMPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 64 IFIEDVREEFVRDYVFPM 81
>gi|331703278|ref|YP_004399965.1| thiamin biosynthesis protein [Mycoplasma mycoides subsp. capri LC
str. 95010]
gi|328801833|emb|CBW53986.1| Thiamin biosynthesis protein [Mycoplasma mycoides subsp. capri LC
str. 95010]
Length = 395
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ L L SGG DS L R +V+ + F L + + + K+
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHFMTPPHTS---HQALDKVFNLAKKLAKY 231
Query: 68 KDSLGEDHILPLAIL 82
S + HI +L
Sbjct: 232 NLSNFKLHICDFNLL 246
>gi|325299223|ref|YP_004259140.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides salanitronis DSM
18170]
gi|324318776|gb|ADY36667.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides salanitronis DSM
18170]
Length = 379
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 20/85 (23%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQRNKVELECRL 54
+ K L+ SGG DSS ++ V ++ GQ E+
Sbjct: 1 MTKDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDIPSHFSTPGQEQPDEILEAQ 60
Query: 55 CVRKKIVELMPKWKDSLGEDHILPL 79
V ++ E H+ +
Sbjct: 61 AVAARLG----------IEHHVADV 75
>gi|307727123|ref|YP_003910336.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia sp.
CCGE1003]
gi|307587648|gb|ADN61045.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia sp.
CCGE1003]
Length = 635
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 53/150 (35%), Gaps = 36/150 (24%)
Query: 13 LLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ SGG DSS L A + + + ++ E+ K +
Sbjct: 261 VSLSGGLDSSAMLGLATELAGKPLHAFHLSF-------EGAEGYDERRYAEIAAKHNN-- 311
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-------- 123
E H+L S ++A +D L +T +P N A ++A
Sbjct: 312 AELHVL----------SIKPDDLADHFEDA-LWHTEIPFSN------AHSIAKYMLCKFI 354
Query: 124 YRLGITNIVIGVCETD-YSGYPDCRHDTIR 152
G+ +V G + ++GYP R D I+
Sbjct: 355 QSKGMRAVVTGEGADEVFAGYPHYRRDMIQ 384
>gi|256827941|ref|YP_003156669.1| asparagine synthase [Desulfomicrobium baculatum DSM 4028]
gi|256577117|gb|ACU88253.1| asparagine synthase (glutamine-hydrolyzing) [Desulfomicrobium
baculatum DSM 4028]
Length = 571
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
LL SGG DS+T + A+ R F G R++ + + + +
Sbjct: 255 LLLSGGLDSTTIAAHAVREMPLRSFAFGFA-GPRDERPFAREVAIAYGLDHVE------- 306
Query: 72 GEDHILPLAIL 82
D +L L +
Sbjct: 307 LADDVLDLPAM 317
>gi|225574858|ref|ZP_03783468.1| hypothetical protein RUMHYD_02936 [Blautia hydrogenotrophica DSM
10507]
gi|225037932|gb|EEG48178.1| hypothetical protein RUMHYD_02936 [Blautia hydrogenotrophica DSM
10507]
Length = 396
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 23/199 (11%), Positives = 59/199 (29%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ +LL SGG DS R +++ + F + +K +
Sbjct: 179 PVGTNGKGMLLLSGGIDSPVAGYMIAKRGVQIDAVYF-----HAPPYTSERAKQKVVDLA 233
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ ++ + + I I + + + ++ + A
Sbjct: 234 RLVARYSGPINLHVVNFTDIQLYIYDQCPHEELTIIMRRY-------------MMRIAEH 280
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A ++ G + + +++ + + V+ P++ K E
Sbjct: 281 FARERKCMGLITGESIGQVAS---------QTMQSLMATNEVCTLPVYRPVIGFDKQEIV 331
Query: 182 KLAQDIGGQDLVNLILEES 200
++A I + E+
Sbjct: 332 EIAHKIDTFETSIQPFEDC 350
>gi|254514885|ref|ZP_05126946.1| tRNA(Ile)-lysidine synthetase [gamma proteobacterium NOR5-3]
gi|219677128|gb|EED33493.1| tRNA(Ile)-lysidine synthetase [gamma proteobacterium NOR5-3]
Length = 413
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 13 LLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ +SGG DS+ L + A V L ++G + EL R C
Sbjct: 12 VAYSGGLDSTVLLHALATSFSGLVTALHANHGLHDDAELWARHCA 56
>gi|152993271|ref|YP_001358992.1| argininosuccinate synthase [Sulfurovum sp. NBC37-1]
gi|187470632|sp|A6QAX6|ASSY_SULNB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|151425132|dbj|BAF72635.1| argininosuccinate synthase [Sulfurovum sp. NBC37-1]
Length = 447
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
+K A+L +SGG D+S L W D ++ V T + D GQ +VE
Sbjct: 4 RKISKAVLAYSGGLDTSIILKWLQDEYECEVVTFTADLGQGEEVE 48
>gi|148380860|ref|YP_001255401.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. ATCC 3502]
gi|153934263|ref|YP_001385167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. ATCC 19397]
gi|153935159|ref|YP_001388636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. Hall]
gi|205810535|sp|A7FXG3|MNMA2_CLOB1 RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|205810559|sp|A5I5Y9|MNMA2_CLOBH RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|148290344|emb|CAL84469.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. ATCC 3502]
gi|152930307|gb|ABS35807.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. ATCC 19397]
gi|152931073|gb|ABS36572.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum A str. Hall]
Length = 353
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--------YGQRNKVELECRLCV 56
+ K AL SGG DSS +R V + D Y ++ E + R
Sbjct: 1 MSKGIVALA-MSGGVDSSVSAYILKERGYDVIGIYMDLWRDERKGYCNKSAAE-DARRVA 58
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISH 87
K + + +D+++ I +S
Sbjct: 59 EKLDIPFHVINIEKKFKDNVIDYFIDEYLSG 89
>gi|118497993|ref|YP_899043.1| glutamine amidotransferase/asparagine synthase [Francisella
tularensis subsp. novicida U112]
gi|194323218|ref|ZP_03057002.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
subsp. novicida FTE]
gi|118412464|gb|ABK81667.1| WbtH [Francisella novicida U112]
gi|118423899|gb|ABK90289.1| glutamine amidotransferase/asparagine synthase [Francisella
novicida U112]
gi|194322582|gb|EDX20062.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
subsp. novicida FTE]
Length = 630
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 15 FSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+T ++ + T S + Q+ E E V K I
Sbjct: 271 LSGGIDSTTVVALMQSMSKNKINTFSIGFNQKEYNEAEHARAVAKHI 317
>gi|330816541|ref|YP_004360246.1| argininosuccinate synthase [Burkholderia gladioli BSR3]
gi|327368934|gb|AEA60290.1| argininosuccinate synthase [Burkholderia gladioli BSR3]
Length = 404
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K LL +SGG D+ST L + +FD RV + GQ+ E R+ R I
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKQQFDCRVTAYCANLGQKEDWE---RMKKRAAIAGADE 58
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNV 94
L E I ++++ ++
Sbjct: 59 LVIADLRETFIRDYVFPALKANAAYERDY 87
>gi|239907289|ref|YP_002954030.1| argininosuccinate synthase [Desulfovibrio magneticus RS-1]
gi|239797155|dbj|BAH76144.1| argininosuccinate synthase [Desulfovibrio magneticus RS-1]
Length = 397
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T++ D GQ +++ LE +
Sbjct: 1 MSTIKKVVLAYSGGLDTSVILKWIKKTYNCEVITVTCDLGQEEELDGLEEKALTTGATKA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDI 85
+ ++ +D I P+ G I
Sbjct: 61 YIDDLREEFAKDFIFPMLRAGAI 83
>gi|157813142|gb|ABV81316.1| putative GMP synthetase [Nebalia hessleri]
Length = 200
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG-QRNKVELECRLCVRK 58
L+L SGG DS+ C + ++V + D G R L+ +RK
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALPEEQVLAVHIDNGFMRKNESLQVEQSLRK 96
>gi|149193858|ref|ZP_01870956.1| argininosuccinate synthase [Caminibacter mediatlanticus TB-2]
gi|149135811|gb|EDM24289.1| argininosuccinate synthase [Caminibacter mediatlanticus TB-2]
Length = 400
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L +SGG D+S L W D++ V T + D GQ +VE E R K V+ +
Sbjct: 2 KVVLAYSGGLDTSVILKWLQDKYNAEVVTFTADIGQGEEVE-EAREKALKLGVKPENIFI 60
Query: 69 DSLGEDHILP 78
+ L E+ +
Sbjct: 61 EDLREEFVRD 70
>gi|28210754|ref|NP_781698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium tetani E88]
gi|75542643|sp|Q896F5|MNMA1_CLOTE RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|28203192|gb|AAO35635.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium tetani E88]
Length = 362
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSF-----DYGQRNKVELECRLCVRKKIVELMPKWKD 69
SGG DSS ++ V ++ +Y +K ++E + K++ + +
Sbjct: 13 MSGGVDSSVTAYLLKEQGYDVIGMTMKVFPGNYHDGSKEKIEDIMKSAKEVCDFLEIPFV 72
Query: 70 SLG 72
+
Sbjct: 73 EVD 75
>gi|225175457|ref|ZP_03729452.1| asparagine synthase [Dethiobacter alkaliphilus AHT 1]
gi|225169209|gb|EEG78008.1| asparagine synthase [Dethiobacter alkaliphilus AHT 1]
Length = 483
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ SGG DSS L+ A + + + + +R+ +LE + ++
Sbjct: 206 VALSGGLDSSIILAVAREFDKDIAAFTATFAERHGEDLEYAKLLADQL 253
>gi|118602730|ref|YP_903945.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|166235080|sp|A1AX17|MNMA_RUTMC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|118567669|gb|ABL02474.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
Length = 363
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS L + +VE L
Sbjct: 2 KNLNKNTKIIVGLSGGVDSSVATLLLLKQGYQVEAL 37
>gi|332877855|ref|ZP_08445593.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684150|gb|EGJ57009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 378
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 47/147 (31%), Gaps = 35/147 (23%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF----------DYGQ------RNK 47
+ + L+ SGG DSS LD V ++ D GQ ++
Sbjct: 1 MEHERKKVLVGMSGGIDSSAVCLMLLDEGYEVVGVTMRVWDLPRQFADTGQEYPDFIQDA 60
Query: 48 VELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
L RL + + + +KD + + + + G + + N A K
Sbjct: 61 RALAARLGIAHYVADERTAFKD-IVVRNFVDEYLAGRTPNPCVMCNPAFK---------- 109
Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIG 134
R A A +LG I G
Sbjct: 110 --FR------VLAEWADKLGCDYIATG 128
>gi|329765269|ref|ZP_08256849.1| asparagine synthase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138175|gb|EGG42431.1| asparagine synthase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 304
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 26/133 (19%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DS+ +R + + K V + + ++
Sbjct: 16 LSGGLDSTIIAYLLKERKPNTVAI-----------------IAKDFVASDLTYCQRVSKE 58
Query: 75 HILPLAILGDISH---SSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
LP+ I + S++ + + + N++ RN I + A A T I
Sbjct: 59 FNLPVTINQVNTTDILSAVEETIKILKNFNDIEI-----RNNIVMYMALKWAKEQNNTGI 113
Query: 132 VIGVCETD-YSGY 143
+ G + ++GY
Sbjct: 114 ITGDGADELFAGY 126
>gi|321460868|gb|EFX71906.1| hypothetical protein DAPPUDRAFT_308688 [Daphnia pulex]
Length = 686
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 72/223 (32%), Gaps = 60/223 (26%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSW---ALDRFD---RVETLSFDYGQRNKVELECRLCVR 57
+ + L+L SGG DS+ C + AL + D RV+ + D G +R
Sbjct: 229 TVGRDKIVLMLVSGGVDSAVCAALLHKALQQGDDSSRVQAIHIDNG-----------FLR 277
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLT---------KNVAMKIQDNNLPNTFV 108
K E + LG + + A L S+ + V + + + +TFV
Sbjct: 278 KDESEQVVTSLQQLGLNLRVVKASLTFYDASTNVHGRQTLSLCRTVNPEEKRRIIGDTFV 337
Query: 109 PGRNIIFLVFAATLAYRLGI--TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--- 163
A A L + N+++G R D I + + +
Sbjct: 338 --------KVADRTANDLNLTWDNLLLGQGTL--------RPDLIESASHMASSRADAIK 381
Query: 164 -------------SHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
H V PL K E L +++G +
Sbjct: 382 THHNDSEMVRQLRHHGRVVEPLKDFHKDEVRALGRELGLPAEL 424
>gi|310780562|ref|YP_003968894.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ilyobacter polytropus DSM 2926]
gi|309749885|gb|ADO84546.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ilyobacter polytropus DSM 2926]
Length = 376
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLS 39
SGG DSST + V ++
Sbjct: 27 MSGGVDSSTVAYMLKKQGYNVIGIT 51
>gi|309378502|emb|CBX22855.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 383
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 17 MN-TTSNPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 72
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 73 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLKEYSAGRTPNPDVLC-NAEIKFKCF 129
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 130 LDYAVG----QGADTIATG 144
>gi|323340632|ref|ZP_08080884.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus ruminis ATCC 25644]
gi|323091755|gb|EFZ34375.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus ruminis ATCC 25644]
Length = 375
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS C + V +
Sbjct: 8 RVVVGMSGGVDSSVCAYLLKRQGYDVVGV 36
>gi|307265334|ref|ZP_07546891.1| ExsB family protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919618|gb|EFN49835.1| ExsB family protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 83
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
M + + + +AL+ FSGG DS+ A +D RV ++ K EL+ + +
Sbjct: 1 MQEYLSRLDNALIAFSGGVDST---FLAKVSYDVLGNRVLAVTATSPMHPKSELKEAVEL 57
Query: 57 RKKI 60
KKI
Sbjct: 58 AKKI 61
>gi|317052068|ref|YP_004113184.1| argininosuccinate synthase [Desulfurispirillum indicum S5]
gi|316947152|gb|ADU66628.1| argininosuccinate synthase [Desulfurispirillum indicum S5]
Length = 407
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELEC 52
+L +SGG D+S L W + +D V + D GQ + EL+
Sbjct: 9 KVVLAYSGGLDTSVILKWLIKEYDCEVIAFTADLGQ--EEELDS 50
>gi|262306013|gb|ACY45599.1| gln amidotransferase [Artemia salina]
Length = 200
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L+L SGG DS+ C + D++ + D G
Sbjct: 43 NMKVLVLLSGGVDSTVCAALLTRALGPDQLVPIHIDNG 80
>gi|229588695|ref|YP_002870814.1| argininosuccinate synthase [Pseudomonas fluorescens SBW25]
gi|259585366|sp|C3KBZ2|ASSY_PSEFS RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|229360561|emb|CAY47418.1| argininosuccinate synthase [Pseudomonas fluorescens SBW25]
Length = 405
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|70732178|ref|YP_261934.1| argininosuccinate synthase [Pseudomonas fluorescens Pf-5]
gi|119361308|sp|Q4K749|ASSY_PSEF5 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|68346477|gb|AAY94083.1| argininosuccinate synthase [Pseudomonas fluorescens Pf-5]
Length = 405
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|117924260|ref|YP_864877.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Magnetococcus sp. MC-1]
gi|205816907|sp|A0L678|MNMA_MAGSM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|117608016|gb|ABK43471.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Magnetococcus sp. MC-1]
Length = 358
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + + SGG DSS + +++ V L+
Sbjct: 1 MTQPQRVAVAMSGGVDSSATAALLVEQGYEVIGLT 35
>gi|332360317|gb|EGJ38129.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK49]
Length = 404
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 62/192 (32%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS AL R +E + F KK +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K + L T R + + G
Sbjct: 233 FGGNIKFIEVPF------TEIQEEIKAKAPEAYLMTLT----R-RFMMRITDRIREERGA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + TI +++ AIN + V P++ + K E +A+ I
Sbjct: 282 QVIINGESLGQVAS------QTIESMQ-AINAVTNTP--VIRPVVTMDKLEIIDIAEKID 332
Query: 189 GQDLVNLILEES 200
+ E+
Sbjct: 333 TFQISIQPFEDC 344
>gi|330811341|ref|YP_004355803.1| argininosuccinate synthase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379449|gb|AEA70799.1| Argininosuccinate synthase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 405
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|312959246|ref|ZP_07773764.1| Argininosuccinate synthase [Pseudomonas fluorescens WH6]
gi|311286506|gb|EFQ65069.1| Argininosuccinate synthase [Pseudomonas fluorescens WH6]
Length = 405
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|284162667|ref|YP_003401290.1| argininosuccinate synthase [Archaeoglobus profundus DSM 5631]
gi|284012664|gb|ADB58617.1| argininosuccinate synthase [Archaeoglobus profundus DSM 5631]
Length = 394
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQ-----RNKVELECRLCVRKKIVE 62
+L +SGG D++ + +++ D V T++ D GQ R E + + V+
Sbjct: 3 KVVLSYSGGLDTTVAIFLLKEKYGFDEVITVTVDIGQPEEDIRKAEERGKKYADKHYTVD 62
Query: 63 LMPKWKDSL 71
++ ++L
Sbjct: 63 AKKEFVEAL 71
>gi|253699615|ref|YP_003020804.1| tRNA-specific 2-thiouridylase MnmA [Geobacter sp. M21]
gi|251774465|gb|ACT17046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sp. M21]
Length = 355
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ K A+ SGG DSST + ++ V +
Sbjct: 1 MSANYKGRKVAVA-MSGGVDSSTVAALLKEQGAEVIGI 37
>gi|88603768|ref|YP_503946.1| GMP synthase subunit B [Methanospirillum hungatei JF-1]
gi|88189230|gb|ABD42227.1| GMP synthase (glutamine-hydrolyzing) [Methanospirillum hungatei
JF-1]
Length = 305
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 62/190 (32%), Gaps = 35/190 (18%)
Query: 9 PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ SGG DSS C A +R+ + D G R K+I E+
Sbjct: 22 EKVVIALSGGVDSSVCAELASRAIGERLIPIYVDTG-------LMRKGETKRISEIFGHL 74
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ L + S + + + + +F A G
Sbjct: 75 GLKVVNA---ADEFLDALEGESDPEKKRKIVGERFIR---------VFEREATA----TG 118
Query: 128 ITNIVIGVCETDYSGYPDC--RHDTIRAIETA--INLGMESHVTVHTPLMWLKKYETWKL 183
++ G + YPDC I++ + L M+ + PL L K E ++
Sbjct: 119 AQYLLQG------TIYPDCIESEGGIKSHHNVGGLPLTMQFQGVIE-PLRDLYKDEVREV 171
Query: 184 AQDIGGQDLV 193
A+ +G +
Sbjct: 172 AEALGLPREI 181
>gi|330973096|gb|EGH73162.1| argininosuccinate synthase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 405
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|309792325|ref|ZP_07686795.1| NAD synthetase [Oscillochloris trichoides DG6]
gi|308225640|gb|EFO79398.1| NAD synthetase [Oscillochloris trichoides DG6]
Length = 322
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 83/249 (33%), Gaps = 65/249 (26%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRF--DRVET------------------ 37
M II+ + A++ SGG DS+T L A+ F +RV
Sbjct: 23 MRQIIQQDFRRRGAVVGLSGGIDSATVLGLAVRAFGAERVLAVMMPEKASSPVSEAYALQ 82
Query: 38 LSFDYGQRNKVE--------LECRLCVRKKIVELMPKWKDSLGEDHIL---PLAILGDIS 86
L+ +G + E L C + + + P + ++ + ++ L G ++
Sbjct: 83 LAAKFGVQAIKEDLTAGLEGLGCYARQDEAVRSVFPDYDPAVDKIKLVLPGDLLERGSLN 142
Query: 87 HSSLTKNVAMKIQDNN-LPNT----FVPGRN------IIFLVFAATLAYRLGITNIVIGV 135
SL+ A ++ LP V N ++ L A + I
Sbjct: 143 VYSLSLTGADGVEQRRVLPVAAYLQIVAASNMKQRSRMLML---YYHAEQRNYAVIGTAN 199
Query: 136 CETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV-- 193
G+ ++ G + + P+ L K + ++LA +G +
Sbjct: 200 RNEHAQGF------FVK-------YG-DGGADIQ-PIQHLYKTQIYQLAHYLGVTQEIIA 244
Query: 194 NLILEESHT 202
+++T
Sbjct: 245 RTPTTDTYT 253
>gi|301605226|ref|XP_002932238.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Xenopus
(Silurana) tropicalis]
Length = 418
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 39/138 (28%), Gaps = 20/138 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL------SFDYGQRNKVELEC--RLCV 56
++ + SGG DSS R V + + D E +C V
Sbjct: 1 MQTVRRVVCAMSGGVDSSVAALLLRRRGYEVTGVFMNNWDAVDEHGVCSAERDCEDAYRV 60
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
KK+ + H + L + T N + + N FL
Sbjct: 61 CKKLDIPFHQVSYVKEYWHEVFSYFLNEYEKG-RTPNPDILCNKHIKFN--------HFL 111
Query: 117 VFAATLAYRLGITNIVIG 134
+A LG I G
Sbjct: 112 SYAI---DILGADAIATG 126
>gi|163751230|ref|ZP_02158458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella benthica KT99]
gi|161328944|gb|EDQ00018.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella benthica KT99]
Length = 376
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS L + RVE L
Sbjct: 6 PTANSSKKVIVGMSGGVDSSVSAYLLLKQGYRVEGL 41
>gi|57167686|ref|ZP_00366826.1| argininosuccinate synthase [Campylobacter coli RM2228]
gi|305433193|ref|ZP_07402349.1| argininosuccinate synthase [Campylobacter coli JV20]
gi|57020808|gb|EAL57472.1| argininosuccinate synthase [Campylobacter coli RM2228]
gi|304443894|gb|EFM36551.1| argininosuccinate synthase [Campylobacter coli JV20]
Length = 406
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K ++L +SGG D+S L W D + V T + D GQ ++E + + I E
Sbjct: 1 MKNEVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELEPARKKALSLGIKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ +D++ P+ I ++
Sbjct: 61 ENVFIKDLREEFVKDYVFPMFRANTIYEGEYLLGTSIA 98
>gi|330966672|gb|EGH66932.1| argininosuccinate synthase [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 405
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|260438131|ref|ZP_05791947.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Butyrivibrio crossotus DSM 2876]
gi|292809456|gb|EFF68661.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Butyrivibrio crossotus DSM 2876]
Length = 357
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKKKVVVGMSGGVDSSVAALILKEQGYDVIGVT 33
>gi|256370668|ref|YP_003108493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Sulcia muelleri SMDSEM]
gi|256009460|gb|ACU52820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Sulcia muelleri SMDSEM]
Length = 470
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY 42
++ SGG DSS + V + Y
Sbjct: 2 KRVIVGMSGGVDSSVAALLLKKQGYEVIGIYLKY 35
>gi|227542894|ref|ZP_03972943.1| hypothetical protein HMPREF0293_2213 [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181327|gb|EEI62299.1| hypothetical protein HMPREF0293_2213 [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 385
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
D ++L FSGG DS CL+ D+ E +S D+G R E KI+
Sbjct: 91 TDFSASNKVSVLNFSGGLDSLACLACL---GDQTELVSLDFGGRFARERRFFKNFDTKII 147
Query: 62 E 62
+
Sbjct: 148 K 148
>gi|224418823|ref|ZP_03656829.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
gi|253828188|ref|ZP_04871073.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
gi|313142341|ref|ZP_07804534.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
gi|253511594|gb|EES90253.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
gi|313131372|gb|EFR48989.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
Length = 405
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ K +L +SGG D+S L W D + V T + D GQ +VE R K +
Sbjct: 2 EKTKDIKKVVLAYSGGLDTSVILKWLGDTYGCEVVTFTADIGQGEEVE-PARAKALKLGI 60
Query: 62 ELMPKWKDSLGEDHILP 78
+ + D L E+ I
Sbjct: 61 KPQNIFIDDLREEFIRD 77
>gi|145300032|ref|YP_001142873.1| tRNA(Ile)-lysidine synthase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852804|gb|ABO91125.1| tRNA(Ile)-lysidine synthase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 456
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 12 LLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYG 43
L+ FSGG DS+ L+ A + + L +G
Sbjct: 23 LVAFSGGLDSTVLLALAAQFAREHGLALRALHVHHG 58
>gi|28871297|ref|NP_793916.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213970868|ref|ZP_03398991.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato T1]
gi|301384497|ref|ZP_07232915.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato
Max13]
gi|302059912|ref|ZP_07251453.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato K40]
gi|302130511|ref|ZP_07256501.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|31562913|sp|Q87XM3|ASSY_PSESM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|28854547|gb|AAO57611.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213924391|gb|EEB57963.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato T1]
gi|330877333|gb|EGH11482.1| argininosuccinate synthase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|331015673|gb|EGH95729.1| argininosuccinate synthase [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 405
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|312137387|ref|YP_004004724.1| pp-loop domain protein [Methanothermus fervidus DSM 2088]
gi|311225106|gb|ADP77962.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
Length = 297
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECR 53
+ +I+K L+ SGG+DS E L D G +++ ++
Sbjct: 41 HRLIEKDEKLLVAVSGGKDSLVLAYILNKLGYEFEGLHIDLGIEDYSEMCKKSSKKIFSE 100
Query: 54 LCVRKKIVELMPKWKDSLGEDH 75
+ + IV++ +GE
Sbjct: 101 IGLPLHIVKIKKLLGRGIGEVK 122
>gi|94498670|ref|ZP_01305222.1| hypothetical protein SKA58_16027 [Sphingomonas sp. SKA58]
gi|94421900|gb|EAT06949.1| hypothetical protein SKA58_16027 [Sphingomonas sp. SKA58]
Length = 449
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 70/240 (29%), Gaps = 47/240 (19%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ LFSGG DS +++ + +S + E + L +K S
Sbjct: 151 VSLFSGGLDSLIGAIDSVNAGETPLLVS------HAGEGLVSKSQEQCFDGLKAAYKSSA 204
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT---------- 121
+ + ++ + +++ GR+ +F
Sbjct: 205 FDRLRVWMSFDSGLVEDVESEDTTR-------------GRSFLFFSLGVAAGTALGRDFV 251
Query: 122 --------LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
+A + + + +G T + +P A + + V P
Sbjct: 252 LKVPENGLIALNVPLDRLRLGALST-RTTHP-----FYMARWNDLLHALGIAGKVENPYW 305
Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYLRQKGWM 232
K E D L+ + +S +C + + + G C C C +R+
Sbjct: 306 NKTKGEMVA---DCANPALLKQLSPQSLSCSSPTKGRWKKKPQGHCGYCLPCLIRRASLR 362
>gi|329847414|ref|ZP_08262442.1| argininosuccinate synthase [Asticcacaulis biprosthecum C19]
gi|328842477|gb|EGF92046.1| argininosuccinate synthase [Asticcacaulis biprosthecum C19]
Length = 411
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRK 58
M+ ++K ++L +SGG D+S L W + V T + D GQ ++E R
Sbjct: 1 MSAPVEKPVKKVVLAYSGGLDTSIILKWLQTEYQAEVVTFTADLGQGEELEPARRKAELL 60
Query: 59 KIVE---LMPKWKDSLGEDHILPL 79
I + ++ D++ P+
Sbjct: 61 GIKPENIFIEDLREEFVRDYVFPM 84
>gi|254458943|ref|ZP_05072366.1| argininosuccinate synthase [Campylobacterales bacterium GD 1]
gi|207084214|gb|EDZ61503.1| argininosuccinate synthase [Campylobacterales bacterium GD 1]
Length = 412
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 25/139 (17%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+KK ++L +SGG D+S L W D + V T + D GQ +VE + + I
Sbjct: 1 MKKEVKKVVLAYSGGLDTSIILKWLQDEYNAEVITFTADLGQGEEVEPARQKALDNGIKP 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ ++ +D++ P+ I ++ + A
Sbjct: 61 ENIFILDVQEEFVKDYVFPMFRANAIYEGEYLLGTSIARP-----------------LIA 103
Query: 120 ---ATLAYRLGITNIVIGV 135
+AY++G + G
Sbjct: 104 KKQIEIAYKMGADAVSHGA 122
>gi|66047119|ref|YP_236960.1| argininosuccinate synthase [Pseudomonas syringae pv. syringae
B728a]
gi|75500941|sp|Q4ZPK0|ASSY_PSEU2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|63257826|gb|AAY38922.1| Argininosuccinate synthase [Pseudomonas syringae pv. syringae
B728a]
gi|330949997|gb|EGH50257.1| argininosuccinate synthase [Pseudomonas syringae Cit 7]
Length = 405
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|317486830|ref|ZP_07945646.1| thiamine biosynthesis protein [Bilophila wadsworthia 3_1_6]
gi|316921993|gb|EFV43263.1| thiamine biosynthesis protein [Bilophila wadsworthia 3_1_6]
Length = 357
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ P A LFSGG DS +++ V L F
Sbjct: 1 MNTSTPHAFALFSGGLDSILAARLIMEQGLVVRCLHF 37
>gi|323127048|gb|ADX24345.1| thiamine biosynthesis protein ThiI [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 404
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEAVHF 209
>gi|322411530|gb|EFY02438.1| thiamine biosynthesis protein ThiI [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 404
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEAVHF 209
>gi|284052528|ref|ZP_06382738.1| tRNA-specific 2-thiouridylase MnmA [Arthrospira platensis str.
Paraca]
gi|291571991|dbj|BAI94263.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Arthrospira platensis NIES-39]
Length = 359
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 24/134 (17%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + + V L+ + C + +V+ +
Sbjct: 2 QKIVVGLSGGVDSSAAAAILHHQGYEVVGLTL------WLMRGKGQCCSEGMVDAAHICE 55
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNII----FLVFAA 120
+I+ L T + ++ T +P R + L +A+
Sbjct: 56 QLGIPHYIVDSRDLFQ------THIIDYLVEGYGAGITPLPCSQCNR-AVKFGPMLGYAS 108
Query: 121 TLAYRLGITNIVIG 134
T L I I G
Sbjct: 109 T---ELNINRIATG 119
>gi|251782195|ref|YP_002996497.1| thiamine biosynthesis protein ThiI [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242390824|dbj|BAH81283.1| thiamine biosynthesis protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 404
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEAVHF 209
>gi|300774572|ref|ZP_07084435.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chryseobacterium gleum ATCC 35910]
gi|300506387|gb|EFK37522.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chryseobacterium gleum ATCC 35910]
Length = 395
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 11/129 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS + V L V LE + + + +
Sbjct: 2 KIVVGLSGGVDSSVTAYLLQQQGHEVVALFMRNWNDASVTLEDECPWIEDSNDALMVAQK 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNI---IFLVFAATLAYR 125
++ ++ ++ + + + + PN V R + +F+ A +
Sbjct: 62 LGIPFQVIDMS---ELYKERIVDYMFAEYEKGRTPNPDVLCNREVKFDVFMKTAMS---- 114
Query: 126 LGITNIVIG 134
LG + G
Sbjct: 115 LGADKVATG 123
>gi|149189394|ref|ZP_01867679.1| hypothetical protein VSAK1_26050 [Vibrio shilonii AK1]
gi|148836752|gb|EDL53704.1| hypothetical protein VSAK1_26050 [Vibrio shilonii AK1]
Length = 372
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 77/259 (29%), Gaps = 62/259 (23%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMP 65
A+ L SGG DS L+ + Y Q + ++E L
Sbjct: 47 KAVSLLSGGLDSFIGAIDLLNSDIDTLFVG-HYAKDGTQHYQNQVEQALK-----GHYPD 100
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+K + I ++ + ++N R+ +FL AA LA
Sbjct: 101 YFKGYVKGCLIFDKSVFKGGNQEIDSENSQRS-------------RSFMFLSMAAYLASS 147
Query: 126 LG--ITNIV----------------IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
+G IV IG T + + + + + ++
Sbjct: 148 MGELCKLIVPENGFIALNVPLDPLRIGANSTKTVH-----PNFMSKMGEIFDF-LGLNIG 201
Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS------- 220
+ P + K E + + L+ E+ +C + + + G+ N
Sbjct: 202 LINPYRHMTKGEMMANCK---NKSLLTKHAHETLSCASQSKMRWDQGGFKANRLGGSGGN 258
Query: 221 -----CPACYLRQKGWMEF 234
C C +R+ + +
Sbjct: 259 GNCGYCYPCLIRKASFQKA 277
>gi|327399703|ref|YP_004340572.1| NH(3)-dependent NAD(+) synthetase [Hippea maritima DSM 10411]
gi|327182332|gb|AEA34513.1| NH(3)-dependent NAD(+) synthetase [Hippea maritima DSM 10411]
Length = 278
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 8/85 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRK------KIV 61
A+L SGG DS+ A + + V + Y +K +E L V K KI
Sbjct: 35 KAVLGLSGGIDSAVVAYLAKEALGKENVYAILMPYKLSSKESVEDALKVVKDTGINYKIF 94
Query: 62 ELMPKWKDSLGEDHILPLAILGDIS 86
E+ + + + G+I
Sbjct: 95 EITKPADAYIDQFDDIDKLRKGNIF 119
>gi|319892675|ref|YP_004149550.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Staphylococcus pseudintermedius HKU10-03]
gi|317162371|gb|ADV05914.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Staphylococcus pseudintermedius HKU10-03]
gi|323464287|gb|ADX76440.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus pseudintermedius ED99]
Length = 370
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS ++ V +
Sbjct: 1 MTNQNTRVVVGMSGGVDSSVTAHLLKEQGYDVIGI 35
>gi|310817148|ref|YP_003965112.1| argininosuccinate synthase [Ketogulonicigenium vulgare Y25]
gi|308755883|gb|ADO43812.1| argininosuccinate synthase [Ketogulonicigenium vulgare Y25]
Length = 412
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
M+ +L +SGG D+S L W + V T + D GQ ++E + +
Sbjct: 1 MSAQKPAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARQKALLLG 60
Query: 60 IVELMPKWKDSLGEDHILPL 79
I E HI+ L
Sbjct: 61 IKEENI---------HIVDL 71
>gi|71736983|ref|YP_276023.1| argininosuccinate synthase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|237798776|ref|ZP_04587237.1| argininosuccinate synthase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|257486626|ref|ZP_05640667.1| argininosuccinate synthase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289650465|ref|ZP_06481808.1| argininosuccinate synthase [Pseudomonas syringae pv. aesculi str.
2250]
gi|289676757|ref|ZP_06497647.1| argininosuccinate synthase [Pseudomonas syringae pv. syringae
FF5]
gi|302184718|ref|ZP_07261391.1| argininosuccinate synthase [Pseudomonas syringae pv. syringae
642]
gi|119361306|sp|Q48F14|ASSY_PSE14 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|71557536|gb|AAZ36747.1| argininosuccinate synthase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320327086|gb|EFW83100.1| argininosuccinate synthase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330879062|gb|EGH13211.1| argininosuccinate synthase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330937556|gb|EGH41497.1| argininosuccinate synthase [Pseudomonas syringae pv. pisi str.
1704B]
gi|330981563|gb|EGH79666.1| argininosuccinate synthase [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330989531|gb|EGH87634.1| argininosuccinate synthase [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331010108|gb|EGH90164.1| argininosuccinate synthase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331021629|gb|EGI01686.1| argininosuccinate synthase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 405
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|322804399|emb|CBZ01949.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium botulinum H04402 065]
Length = 326
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
AL + SGG DS+ D+ V + F
Sbjct: 3 RALAMISGGLDSTLAAKLIKDQGIEVIGICFR 34
>gi|292492798|ref|YP_003528237.1| argininosuccinate synthase [Nitrosococcus halophilus Nc4]
gi|291581393|gb|ADE15850.1| argininosuccinate synthase [Nitrosococcus halophilus Nc4]
Length = 405
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + + V T + D GQ +V + E+
Sbjct: 1 MSTIKKVVLAYSGGLDTSVILKWLRETYGCEVVTFTADIGQGEEVAPARAKAEALGVKEI 60
Query: 64 M-PKWKDSLGEDHILPL 79
+ + D++ P+
Sbjct: 61 YVEELCEEFARDYVFPM 77
>gi|289624958|ref|ZP_06457912.1| argininosuccinate synthase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|330867248|gb|EGH01957.1| argininosuccinate synthase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 405
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|170760015|ref|YP_001785458.1| hypothetical protein CLK_3304 [Clostridium botulinum A3 str. Loch
Maree]
gi|169407004|gb|ACA55415.1| conserved hypothetical protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 326
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
AL + SGG DS+ D+ V + F
Sbjct: 3 RALAMISGGLDSTLAAKLIKDQGIEVIGICFR 34
>gi|170757780|ref|YP_001779756.1| hypothetical protein CLD_0657 [Clostridium botulinum B1 str.
Okra]
gi|169122992|gb|ACA46828.1| conserved hypothetical protein [Clostridium botulinum B1 str.
Okra]
Length = 326
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
AL + SGG DS+ D+ V + F
Sbjct: 3 RALAMISGGLDSTLAAKLIKDQGIEVIGICFR 34
>gi|168182262|ref|ZP_02616926.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237793447|ref|YP_002860999.1| hypothetical protein CLJ_B0167 [Clostridium botulinum Ba4 str.
657]
gi|182674625|gb|EDT86586.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229262133|gb|ACQ53166.1| conserved hypothetical protein [Clostridium botulinum Ba4 str.
657]
Length = 326
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
AL + SGG DS+ D+ V + F
Sbjct: 3 RALAMISGGLDSTLAAKLIKDQGIEVIGICFR 34
>gi|168177461|ref|ZP_02612125.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226947352|ref|YP_002802443.1| hypothetical protein CLM_0172 [Clostridium botulinum A2 str.
Kyoto]
gi|182671002|gb|EDT82976.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226844468|gb|ACO87134.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 326
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
AL + SGG DS+ D+ V + F
Sbjct: 3 RALAMISGGLDSTLAAKLIKDQGIEVIGICFR 34
>gi|163751634|ref|ZP_02158854.1| argininosuccinate synthase [Shewanella benthica KT99]
gi|161328460|gb|EDP99615.1| argininosuccinate synthase [Shewanella benthica KT99]
Length = 407
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELEC--RL 54
M++ IKK +L +SGG D+S + W + +D E ++F D GQ ELE
Sbjct: 1 MSNQIKKTDVKKVVLAYSGGLDTSAIIPWLKETYDNCEIIAFCADVGQ-GDAELEGLHAK 59
Query: 55 CVRKKIVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ E + K+ L D+I P G I + +M
Sbjct: 60 AIASGASECYIVDLKEELVADYIYPTIATGAIYEGTYLLGTSMA 103
>gi|153938098|ref|YP_001389492.1| hypothetical protein CLI_0184 [Clostridium botulinum F str.
Langeland]
gi|152933994|gb|ABS39492.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
gi|295317593|gb|ADF97970.1| conserved hypothetical protein [Clostridium botulinum F str.
230613]
Length = 326
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
AL + SGG DS+ D+ V + F
Sbjct: 3 RALAMISGGLDSTLAAKLIKDQGIEVIGICFR 34
>gi|148378135|ref|YP_001252676.1| hypothetical protein CBO0129 [Clostridium botulinum A str. ATCC
3502]
gi|153930964|ref|YP_001382536.1| hypothetical protein CLB_0165 [Clostridium botulinum A str. ATCC
19397]
gi|153937112|ref|YP_001386088.1| hypothetical protein CLC_0177 [Clostridium botulinum A str. Hall]
gi|148287619|emb|CAL81684.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
gi|152927008|gb|ABS32508.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152933026|gb|ABS38525.1| conserved hypothetical protein [Clostridium botulinum A str.
Hall]
Length = 326
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
AL + SGG DS+ D+ V + F
Sbjct: 3 RALAMISGGLDSTLAAKLIKDQGIEVIGICFR 34
>gi|147920252|ref|YP_685981.1| argininosuccinate synthase [uncultured methanogenic archaeon
RC-I]
gi|110621377|emb|CAJ36655.1| argininosuccinate synthase [uncultured methanogenic archaeon
RC-I]
Length = 395
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE-- 62
+L +SGG D+S C+ + + D+V T++ D GQ E+E K I +
Sbjct: 1 MVKKVVLAYSGGLDTSVCIPLLKENYGFDKVITVTVDVGQ-PPGEIETATKKAKLISDKH 59
Query: 63 LMPKWKDSLGEDHILPL 79
KD D+I P+
Sbjct: 60 YTIDAKDEFVRDYIFPM 76
>gi|206901476|ref|YP_002251205.1| tRNA methyl transferase [Dictyoglomus thermophilum H-6-12]
gi|206740579|gb|ACI19637.1| tRNA methyl transferase [Dictyoglomus thermophilum H-6-12]
Length = 327
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
K A+ L SGG DS L + V ++F
Sbjct: 2 KKVRAISLISGGLDSILATWLILQQGIEVIGVTF 35
>gi|320325630|gb|EFW81692.1| argininosuccinate synthase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 405
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|309775351|ref|ZP_07670356.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erysipelotrichaceae bacterium 3_1_53]
gi|308916868|gb|EFP62603.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erysipelotrichaceae bacterium 3_1_53]
Length = 386
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
+ LL SGG DS+ ++ V
Sbjct: 1 MSQKVLLGLSGGVDSAVAAYLLKEQGYDVTC 31
>gi|298488737|ref|ZP_07006766.1| Argininosuccinate synthase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298156810|gb|EFH97901.1| Argininosuccinate synthase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 405
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|291277103|ref|YP_003516875.1| putative tRNA methyltransferase [Helicobacter mustelae 12198]
gi|290964297|emb|CBG40147.1| putative tRNA methyltransferase [Helicobacter mustelae 12198]
Length = 346
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
LFSGG DS + D+ V L F+ G
Sbjct: 3 LFSGGLDSLISMKLLKDQNIEVIALHFNIG 32
>gi|240047229|ref|YP_002960617.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma conjunctivae
HRC/581]
gi|239984801|emb|CAT04780.1| tRNA-specific 2-thiouridylase mnmA [Mycoplasma conjunctivae]
Length = 370
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V +
Sbjct: 3 RIVVGLSGGVDSSVTAYLLKQQGHEVIAV 31
>gi|269123587|ref|YP_003306164.1| thiamine biosynthesis/tRNA modification protein ThiI
[Streptobacillus moniliformis DSM 12112]
gi|268314913|gb|ACZ01287.1| thiamine biosynthesis/tRNA modification protein ThiI
[Streptobacillus moniliformis DSM 12112]
Length = 394
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 26/200 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A + L L SGG DS R +++ +++ + + K I EL
Sbjct: 177 PLGSAGNGLSLISGGIDSPVASFLMSKRGLKLDFVTY-----HSFPFTSEKALVK-IEEL 230
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + G+ S + L A+ + N T + R + + + LA
Sbjct: 231 VKILSEYNGKSK--------FYSMNILPIQQAINEKTNKEYATILTRR--VMMRLSEMLA 280
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ + +V G + T+ + + V PL+ + K E +
Sbjct: 281 KKNNLRALVTGESLGQVAS------QTLEGLNCTA--ASVKDLVVFRPLISIDKLEIIEK 332
Query: 184 AQDIGGQDLVNLILEESHTC 203
A +IG + ++ +C
Sbjct: 333 ANEIGTYEKSIEPHDD--SC 350
>gi|254455732|ref|ZP_05069161.1| argininosuccinate synthase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082734|gb|EDZ60160.1| argininosuccinate synthase [Candidatus Pelagibacter sp. HTCC7211]
Length = 393
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K +L +SGG D+S L W + +D V + D GQ RKKI++
Sbjct: 1 MKSKKKIVLAYSGGLDTSIILKWLQENYDAEVICYTADVGQ---------EINRKKIIKN 51
Query: 64 MPKWKDSLGEDHILPLAILGDI 85
K+ L + D
Sbjct: 52 AKKFGVKNIIIKDLKDIFVKDY 73
>gi|154503928|ref|ZP_02040988.1| hypothetical protein RUMGNA_01754 [Ruminococcus gnavus ATCC
29149]
gi|153795527|gb|EDN77947.1| hypothetical protein RUMGNA_01754 [Ruminococcus gnavus ATCC
29149]
Length = 356
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL 54
++ SGG DSS ++ V ++ Q + E +
Sbjct: 3 KVVVGMSGGVDSSVAAYLLKEQGYDVIGVTM---QIWQDEEQAAQ 44
>gi|20808825|ref|NP_623996.1| ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478816|ref|ZP_05092183.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
gi|20517476|gb|AAM25600.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Thermoanaerobacter tengcongensis MB4]
gi|214035271|gb|EEB75978.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
Length = 300
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
N + KK L++ SGG+DS + V + + G
Sbjct: 41 NKMFKKDDKVLVVVSGGKDSMALWDVLVKEGYNVVAMYINLG 82
>gi|222823759|ref|YP_002575333.1| argininosuccinate synthetase [Campylobacter lari RM2100]
gi|254807514|sp|B9KG97|ASSY_CAMLR RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|222538981|gb|ACM64082.1| argininosuccinate synthetase [Campylobacter lari RM2100]
Length = 406
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+KK ++L +SGG D+S L W D + V T + D GQ ++E + + + E
Sbjct: 1 MKKDIKKVVLAYSGGLDTSIILKWLQDEYKSEVVTFTADIGQGEELEPARKKALSLGVKE 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ KD +D++ + I ++
Sbjct: 61 ENIFIKDLKDEFVKDYVFAMFRANAIYEGEYLLGTSIA 98
>gi|329894882|ref|ZP_08270681.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[gamma proteobacterium IMCC3088]
gi|328922611|gb|EGG29946.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[gamma proteobacterium IMCC3088]
Length = 361
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS +++ VE L
Sbjct: 1 MNPKQKVIVGLSGGVDSSVAALCLIEQGFDVEAL 34
>gi|295695622|ref|YP_003588860.1| NAD+ synthetase [Bacillus tusciae DSM 2912]
gi|295411224|gb|ADG05716.1| NAD+ synthetase [Bacillus tusciae DSM 2912]
Length = 281
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKK 59
++ K S ++L SGG DS+ A FDR + + Y K L ++
Sbjct: 30 EVSKAGFSKVVLGLSGGIDSAVVAYLAARAFDRGQILAVLMPY----KTSSPASLDDARR 85
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
+VE + + + ++ GD S+L + M +
Sbjct: 86 VVEQLDLPSEIVDITPMVDAFFAGDPEASALRRGNRMARE 125
>gi|160890666|ref|ZP_02071669.1| hypothetical protein BACUNI_03111 [Bacteroides uniformis ATCC
8492]
gi|270295763|ref|ZP_06201963.1| tRNA methyl transferase [Bacteroides sp. D20]
gi|317479803|ref|ZP_07938923.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
gi|156859665|gb|EDO53096.1| hypothetical protein BACUNI_03111 [Bacteroides uniformis ATCC
8492]
gi|270273167|gb|EFA19029.1| tRNA methyl transferase [Bacteroides sp. D20]
gi|316904009|gb|EFV25843.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
Length = 364
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLS 39
+ K L+ SGG DS+ TCL ++ + L+
Sbjct: 1 MNKPGKRVLVGMSGGIDSTATCL-MLREQGYEIIGLT 36
>gi|94495596|ref|ZP_01302176.1| argininosuccinate synthase [Sphingomonas sp. SKA58]
gi|94424984|gb|EAT10005.1| argininosuccinate synthase [Sphingomonas sp. SKA58]
Length = 405
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR---KK 59
+ +K +L FSGG D+S L W + V T + D GQ ++E K+
Sbjct: 1 MTEKINRIVLAFSGGLDTSVILKWLQQTYGCEVVTFTADLGQGEELEPARAKAQLMGVKQ 60
Query: 60 IVELMPKWKDSLGEDHILPL 79
+ ++ +D++ P+
Sbjct: 61 EHIFIDDLREEFVKDYVFPM 80
>gi|330957746|gb|EGH58006.1| argininosuccinate synthase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 405
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|330889568|gb|EGH22229.1| argininosuccinate synthase [Pseudomonas syringae pv. mori str.
301020]
Length = 405
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 1 MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|198283303|ref|YP_002219624.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665676|ref|YP_002425891.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247824|gb|ACH83417.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517889|gb|ACK78475.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 464
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 8/71 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCVRKKIVELM 64
+ +SGG DS+ L L + L D+G R E L V ++ L
Sbjct: 31 VAYSGGGDSTALLVALLSLGYEIHALHVDHGWHPDSAQWARFCQEQAKALGVPFTLLHLA 90
Query: 65 PKWKDSLGEDH 75
ED
Sbjct: 91 ADTPGEGPEDQ 101
>gi|194290687|ref|YP_002006594.1| tRNA-specific 2-thiouridylase mnma [Cupriavidus taiwanensis LMG
19424]
gi|229486340|sp|B3R6Q0|MNMA_CUPTR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|193224522|emb|CAQ70533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cupriavidus taiwanensis LMG 19424]
Length = 361
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
A ++ SGG DSS + V L
Sbjct: 5 AKRVVVGMSGGVDSSVTAWLLKQQGYEVIGL 35
>gi|74316869|ref|YP_314609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thiobacillus denitrificans ATCC 25259]
gi|123612137|sp|Q3SKH7|MNMA_THIDA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|74056364|gb|AAZ96804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thiobacillus denitrificans ATCC 25259]
Length = 358
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 6/32 (18%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DS+ + V +
Sbjct: 1 MSTRVVVGLSGGVDSAVAAYLLKQQGYDVLGV 32
>gi|330813344|ref|YP_004357583.1| argininosuccinate synthase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486439|gb|AEA80844.1| argininosuccinate synthase [Candidatus Pelagibacter sp. IMCC9063]
Length = 395
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ---RNKVELECRLCVRKKI 60
+KK +L +SGG D+S L W ++++ V + D GQ R K+ + KKI
Sbjct: 1 MKKINKIVLAYSGGLDTSVILRWLQEKYECEVICYTADLGQDIDRKKIIQNAKRLGVKKI 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDI 85
+ + ++ +D++ P+ +
Sbjct: 61 I--IEDLQEIFVKDYVFPMIRANAL 83
>gi|325067603|ref|ZP_08126276.1| asparagine synthase (glutamine-hydrolyzing) [Actinomyces oris K20]
Length = 555
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 11/91 (12%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI------- 60
P ++ SGG DS ++W ++F YG+ E+E V + +
Sbjct: 182 TPRLVVPLSGGLDSRLLVAWLTLHDALDRAVAFTYGRPGAREVEISRKVAQAVGLEWHAV 241
Query: 61 ----VELMPKWKDSLGEDHILPLAILGDISH 87
L W+ D + LG + H
Sbjct: 242 DYDPATLREAWQTQEAADFLTDGYALGALPH 272
>gi|323490019|ref|ZP_08095240.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Planococcus donghaensis MPA1U2]
gi|323396315|gb|EGA89140.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Planococcus donghaensis MPA1U2]
Length = 371
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ KAP ++ SGG DSS ++ V +
Sbjct: 1 MTKAPQDTRVVVGMSGGVDSSVAAYLLKEQGYDVIGI 37
>gi|320528367|ref|ZP_08029529.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Solobacterium moorei F0204]
gi|320131281|gb|EFW23849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Solobacterium moorei F0204]
Length = 382
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVET 37
L+ SGG DS+ + V
Sbjct: 2 KKVLVGLSGGVDSAVAAYLLQQQGYDVTC 30
>gi|260892132|ref|YP_003238229.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ammonifex degensii KC4]
gi|260864273|gb|ACX51379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ammonifex degensii KC4]
Length = 344
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+T L V ++ + G++ E+ +L + + +L ++
Sbjct: 6 VALSGGVDSATAAFLLLQAGYEVFGVTMLVTGEEGEK-AAEVAAKLKIPHFVFDLRQEFA 64
Query: 69 DSLGEDHI 76
+ + +
Sbjct: 65 QEVIKPFV 72
>gi|226941091|ref|YP_002796165.1| argininosuccinate synthase [Laribacter hongkongensis HLHK9]
gi|254807526|sp|C1D9Q4|ASSY_LARHH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|226716018|gb|ACO75156.1| AssY [Laribacter hongkongensis HLHK9]
Length = 408
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + +L +SGG D+S L W D + V T + D GQ +VE + + I
Sbjct: 1 MHEVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEVEPARKKALALGI 57
>gi|270308092|ref|YP_003330150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalococcoides sp. VS]
gi|270153984|gb|ACZ61822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalococcoides sp. VS]
Length = 357
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 14/76 (18%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFD-------YGQ-------RNKVELECRLCVRK 58
+ SGG DSS L++ V +S YG E+ L +
Sbjct: 10 VAMSGGVDSSVAAMLLLEQGYDVAGVSLQLKSNNEPYGNGYNLKLINRAREVAAALGIPH 69
Query: 59 KIVELMPKWKDSLGED 74
+V+L + + D
Sbjct: 70 YVVDLSDIFSQRVIAD 85
>gi|119476176|ref|ZP_01616528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[marine gamma proteobacterium HTCC2143]
gi|119450803|gb|EAW32037.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[marine gamma proteobacterium HTCC2143]
Length = 372
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 47/139 (33%), Gaps = 12/139 (8%)
Query: 1 MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCV 56
MN+I P ++ SGG DSS + +VE L +N E + C
Sbjct: 1 MNNIAATKPSDQKVIVGMSGGVDSSVSALLLQQQGYQVEGLFM----KNWDEDDGSEYCT 56
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIF 115
K + D L L A ++ ++ + + PN V R I F
Sbjct: 57 AKDDLADAQAVCDQLKI--TLHTANFAAEYWDNVFEHFLAEYKAGRTPNPDVLCNREIKF 114
Query: 116 LVFAATLAYRLGITNIVIG 134
F A LG I G
Sbjct: 115 KAF-LDYALVLGADYIATG 132
>gi|86609210|ref|YP_477972.1| argininosuccinate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119361334|sp|Q2JKS2|ASSY_SYNJB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|86557752|gb|ABD02709.1| argininosuccinate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 400
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 35/142 (24%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +A +L +SGG D+S C+ + + + V L+ D GQ ++E +R
Sbjct: 1 MGRAKKVVLAYSGGVDTSVCIPYLKHEWGVESVVALAVDLGQGAELEAIQAKALRAG--- 57
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
E ++ A+ I+ + A + + P L A
Sbjct: 58 ---------AEQSLVREAVQALITDYAFPAIQANALYEQRYP-----------LSTALAR 97
Query: 122 ---------LAYRLGITNIVIG 134
+A +G + G
Sbjct: 98 PLIAKLLVEVAEEVGADAVAHG 119
>gi|294793679|ref|ZP_06758816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella sp. 3_1_44]
gi|294455249|gb|EFG23621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella sp. 3_1_44]
Length = 363
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 35/136 (25%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF-------DYGQRNKVELECRLCVRKKIVELMP 65
+ SGG DSS + L + +V ++ Y E+ + KK+ + +
Sbjct: 17 VAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPY-----DEVPLAVTDAKKMCDFLG 71
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFLVF 118
E H++ D+ + ++ + PN P +NI + L
Sbjct: 72 I------EHHVID---ARDVFYENVVDYFVKEYAYGRTPN---PCVFCNKNIKFDLMLNR 119
Query: 119 AATLAYRLGITNIVIG 134
A LG T++V G
Sbjct: 120 AL----ELGATHMVTG 131
>gi|291280006|ref|YP_003496841.1| argininosuccinate synthase [Deferribacter desulfuricans SSM1]
gi|290754708|dbj|BAI81085.1| argininosuccinate synthase [Deferribacter desulfuricans SSM1]
Length = 403
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 22/58 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+L +SGG D+S L W + V D GQR+ +E + E
Sbjct: 2 SREKVVLAYSGGLDTSVILKWLDLQGYDVVAYVADLGQRDDLEALEEKAYKSGAKEFY 59
>gi|256375504|ref|YP_003099164.1| asparagine synthase (glutamine-hydrolyzing) [Actinosynnema mirum
DSM 43827]
gi|255919807|gb|ACU35318.1| asparagine synthase (glutamine-hydrolyzing) [Actinosynnema mirum
DSM 43827]
Length = 642
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 18/46 (39%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+ + A + T + + ++ E++ I
Sbjct: 275 LSGGIDSTVVAALAKQHNPDLITFTTGFERQGYSEIDVAAESAAAI 320
>gi|322801639|gb|EFZ22280.1| hypothetical protein SINV_80105 [Solenopsis invicta]
Length = 411
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
+ + ++L +SGG D+S L W ++ +V + GQ+
Sbjct: 1 MSDSKRKVILAYSGGLDTSCILLWLKEKGYQVIAYVANIGQK 42
>gi|313893420|ref|ZP_07826992.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442061|gb|EFR60481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella sp. oral taxon 158 str. F0412]
Length = 353
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 35/136 (25%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF-------DYGQRNKVELECRLCVRKKIVELMP 65
+ SGG DSS + L + +V ++ Y E+ + KK+ + +
Sbjct: 7 VAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPY-----DEVPLAVTDAKKMCDFLG 61
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFLVF 118
E H++ D+ + ++ + PN P +NI + L
Sbjct: 62 I------EHHVID---ARDVFYENVVDYFVKEYAYGRTPN---PCVFCNKNIKFDLMLNR 109
Query: 119 AATLAYRLGITNIVIG 134
A LG T++V G
Sbjct: 110 AL----ELGATHMVTG 121
>gi|308270746|emb|CBX27356.1| hypothetical protein N47_H21780 [uncultured Desulfobacterium sp.]
Length = 275
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 57/178 (32%), Gaps = 40/178 (22%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K+ ++L + FSGG DSS L+ A +V ++ E E KK
Sbjct: 19 KSYNSLAIAFSGGVDSSFLLALAHQVLGKKVIAITAVSPVHPARETEFAKSFAKK----- 73
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ I+ + ++ T+N + N P L A
Sbjct: 74 -----RNIKHKIIKSDEMDIAEFTANTRNRCYICKKNLFPR---------LLECAV---- 115
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYET 180
+ GI ++ G D + R + A S + + PL+ K +
Sbjct: 116 KSGIKDLAHGANMDDLDDF---RPGFMAA----------SELKIAAPLIDAGFSKQQI 160
>gi|262306029|gb|ACY45607.1| gln amidotransferase [Dinothrombium pandorae]
Length = 196
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L+L SGG DS+ C + D+V D G
Sbjct: 43 NNKVLMLVSGGVDSTVCAALLHKALKPDQVIAFHIDNG 80
>gi|269214555|ref|ZP_05986816.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria lactamica ATCC 23970]
gi|269209446|gb|EEZ75901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria lactamica ATCC 23970]
Length = 367
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTSDPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 114 LDYAVG----QGADTIATG 128
>gi|148655490|ref|YP_001275695.1| ExsB family protein [Roseiflexus sp. RS-1]
gi|148567600|gb|ABQ89745.1| ExsB family protein [Roseiflexus sp. RS-1]
Length = 285
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 64/197 (32%), Gaps = 45/197 (22%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFD---YGQRNKVELECRLCV 56
+ I++ SAL+ FSGG DS+ L A D DR + D Y R ++E C L
Sbjct: 19 LQAILRTIGSALIAFSGGVDSTLLLKVAHDTLGDRAIAATADSETYP-REELEQACALAA 77
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+G HI+ S + T
Sbjct: 78 -------------LIGCRHIVVRTD----ELSDERYARNHPDRCYYCKRT--------LF 112
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-- 174
LA LG+ I+ G D D R L V +PL+
Sbjct: 113 THLQPLAAELGVAAILYGAMADDIG---DHRP----------GLRAAVEFAVRSPLIEAG 159
Query: 175 LKKYETWKLAQDIGGQD 191
L K E +LA+ +G +
Sbjct: 160 LGKREIRELARRLGLPN 176
>gi|91793184|ref|YP_562835.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella denitrificans OS217]
gi|91715186|gb|ABE55112.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella denitrificans OS217]
Length = 377
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
I ++ SGG DSS + + VE L
Sbjct: 10 KPIHNGKKVIVGMSGGVDSSVSAYLLMQQGYEVEGL 45
>gi|45357721|ref|NP_987278.1| hypothetical protein MMP0158 [Methanococcus maripaludis S2]
gi|45047281|emb|CAF29714.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 199
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKI 60
A +LFSGG+DSS + ++ ++ ++G R+ E + K+
Sbjct: 6 KAHVLFSGGKDSSLSAIILHNLGYDIQLVTVNFGVLDSYRHAEETAKIIGYPHKV 60
>gi|294791818|ref|ZP_06756966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella sp. 6_1_27]
gi|294457048|gb|EFG25410.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella sp. 6_1_27]
Length = 363
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 35/136 (25%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF-------DYGQRNKVELECRLCVRKKIVELMP 65
+ SGG DSS + L + +V ++ Y E+ + KK+ + +
Sbjct: 17 VAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPY-----DEVPLAVTDAKKMCDFLG 71
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFLVF 118
E H++ D+ + ++ + PN P +NI + L
Sbjct: 72 I------EHHVID---ARDVFYENVVDYFVKEYAYGRTPN---PCVFCNKNIKFDLMLNR 119
Query: 119 AATLAYRLGITNIVIG 134
A LG T++V G
Sbjct: 120 AL----ELGATHMVTG 131
>gi|83746745|ref|ZP_00943793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia solanacearum UW551]
gi|207744291|ref|YP_002260683.1| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase
protein [Ralstonia solanacearum IPO1609]
gi|83726514|gb|EAP73644.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia solanacearum UW551]
gi|206595696|emb|CAQ62623.1| probable trna
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
protein [Ralstonia solanacearum IPO1609]
Length = 370
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 4 KRVVVGLSGGVDSSVTAWLLKQQGYEVVGL 33
>gi|332366587|gb|EGJ44331.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1059]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|332361365|gb|EGJ39169.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1056]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|332524005|ref|ZP_08400257.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
porcinus str. Jelinkova 176]
gi|332315269|gb|EGJ28254.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
porcinus str. Jelinkova 176]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|330954721|gb|EGH54981.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae Cit 7]
Length = 225
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK 47
L+L SGG DS+ + R F+ G R
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAH 218
>gi|327469449|gb|EGF14918.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK330]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|325696671|gb|EGD38560.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK160]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|325694399|gb|EGD36310.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK150]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|325689808|gb|EGD31812.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK115]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|324993019|gb|EGC24939.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK405]
gi|324995672|gb|EGC27584.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK678]
gi|327461287|gb|EGF07618.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1]
gi|327489146|gb|EGF20939.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1058]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|324990777|gb|EGC22712.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK353]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|322385589|ref|ZP_08059233.1| thiamine biosynthesis protein ThiI [Streptococcus cristatus ATCC
51100]
gi|321270327|gb|EFX53243.1| thiamine biosynthesis protein ThiI [Streptococcus cristatus ATCC
51100]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|322392197|ref|ZP_08065658.1| thiamine biosynthesis protein ThiI [Streptococcus peroris ATCC
700780]
gi|321144732|gb|EFX40132.1| thiamine biosynthesis protein ThiI [Streptococcus peroris ATCC
700780]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|322389756|ref|ZP_08063303.1| thiamine biosynthesis protein ThiI [Streptococcus parasanguinis
ATCC 903]
gi|321143595|gb|EFX39026.1| thiamine biosynthesis protein ThiI [Streptococcus parasanguinis
ATCC 903]
Length = 406
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|322388138|ref|ZP_08061742.1| thiamine biosynthesis protein ThiI [Streptococcus infantis ATCC
700779]
gi|321140810|gb|EFX36311.1| thiamine biosynthesis protein ThiI [Streptococcus infantis ATCC
700779]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|319939302|ref|ZP_08013663.1| thiamine biosynthesis ATP pyrophosphatase [Streptococcus anginosus
1_2_62CV]
gi|319811556|gb|EFW07840.1| thiamine biosynthesis ATP pyrophosphatase [Streptococcus anginosus
1_2_62CV]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|319947191|ref|ZP_08021425.1| thiamine biosynthesis protein ThiI [Streptococcus australis ATCC
700641]
gi|319747239|gb|EFV99498.1| thiamine biosynthesis protein ThiI [Streptococcus australis ATCC
700641]
Length = 406
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|319745308|gb|EFV97625.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae ATCC
13813]
Length = 414
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 189 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 219
>gi|315221354|ref|ZP_07863275.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
anginosus F0211]
gi|315189473|gb|EFU23167.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
anginosus F0211]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|313890599|ref|ZP_07824227.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pseudoporcinus SPIN 20026]
gi|313121116|gb|EFR44227.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pseudoporcinus SPIN 20026]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|312867479|ref|ZP_07727688.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
parasanguinis F0405]
gi|311097180|gb|EFQ55415.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
parasanguinis F0405]
Length = 406
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|309800145|ref|ZP_07694333.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
infantis SK1302]
gi|308116232|gb|EFO53720.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
infantis SK1302]
Length = 309
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 84 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 114
>gi|307704657|ref|ZP_07641557.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis SK597]
gi|307621766|gb|EFO00803.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis SK597]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|307706813|ref|ZP_07643618.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis SK321]
gi|307617898|gb|EFN97060.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis SK321]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|307701989|ref|ZP_07638997.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis NCTC 12261]
gi|307616634|gb|EFN95823.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
mitis NCTC 12261]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|303269386|ref|ZP_07355157.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS458]
gi|302641104|gb|EFL71480.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS458]
Length = 393
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|296876305|ref|ZP_06900357.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
parasanguinis ATCC 15912]
gi|296432595|gb|EFH18390.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
parasanguinis ATCC 15912]
Length = 406
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 211
>gi|289168192|ref|YP_003446461.1| thiamine biosynthesis protein [Streptococcus mitis B6]
gi|288907759|emb|CBJ22596.1| thiamine biosynthesis protein [Streptococcus mitis B6]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|288800193|ref|ZP_06405652.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella sp.
oral taxon 299 str. F0039]
gi|288333441|gb|EFC71920.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella sp.
oral taxon 299 str. F0039]
Length = 444
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 42/139 (30%), Gaps = 22/139 (15%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+++ K L+ SGG DS L VE ++ R + E + K +
Sbjct: 14 ELMSKNQLYLVALSGGADSVALLLVLKRLGYNVEAAHCNFHLRGE-ESDRDEDFCKDLCR 72
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ D ++ +++++ NL + L
Sbjct: 73 ELDIKLHLAHFDT----------QTNASLHGISIEMAARNLRYNYFE-----------AL 111
Query: 123 AYRLGITNIVIGVCETDYS 141
+ + + + + D +
Sbjct: 112 LKDINASAVCVAHHKDDSA 130
>gi|270293013|ref|ZP_06199224.1| thiazole biosynthesis protein ThiI [Streptococcus sp. M143]
gi|270278992|gb|EFA24838.1| thiazole biosynthesis protein ThiI [Streptococcus sp. M143]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|251789549|ref|YP_003004270.1| tRNA-specific 2-thiouridylase MnmA [Dickeya zeae Ech1591]
gi|247538170|gb|ACT06791.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dickeya zeae Ech1591]
Length = 372
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ ++ SGG DSS + +VE L
Sbjct: 1 MSMSDNSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGL 38
>gi|225858680|ref|YP_002740190.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae 70585]
gi|254784232|sp|C1C6L4|THII_STRP7 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|225721635|gb|ACO17489.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae 70585]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|207721599|ref|YP_002252038.1| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase
protein [Ralstonia solanacearum MolK2]
gi|206586760|emb|CAQ17345.1| probable trna
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
protein [Ralstonia solanacearum MolK2]
Length = 370
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 4 KRVVVGLSGGVDSSVTAWLLKQQGYEVVGL 33
>gi|169349710|ref|ZP_02866648.1| hypothetical protein CLOSPI_00448 [Clostridium spiroforme DSM
1552]
gi|169293785|gb|EDS75918.1| hypothetical protein CLOSPI_00448 [Clostridium spiroforme DSM
1552]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK---VELECRLCVRKKIVE 62
+L +SGG D++ + W + + V D GQ+++ +E + C K+
Sbjct: 1 MKEKVILAYSGGLDTTAIIPWLKENYDYEVICCCIDVGQKDELDGLEERAKKCGATKL-- 58
Query: 63 LMPKWKDSLGEDHILP 78
+ + +D+I+P
Sbjct: 59 YIKNVVEEYVDDYIIP 74
>gi|169832816|ref|YP_001694334.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
Hungary19A-6]
gi|238688286|sp|B1IB49|THII_STRPI RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|168995318|gb|ACA35930.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae Hungary19A-6]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|148643144|ref|YP_001273657.1| argininosuccinate synthase [Methanobrevibacter smithii ATCC 35061]
gi|261350059|ref|ZP_05975476.1| argininosuccinate synthase [Methanobrevibacter smithii DSM 2374]
gi|148552161|gb|ABQ87289.1| argininosuccinate synthase, ArgG [Methanobrevibacter smithii ATCC
35061]
gi|288860845|gb|EFC93143.1| argininosuccinate synthase [Methanobrevibacter smithii DSM 2374]
Length = 391
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 66/207 (31%), Gaps = 55/207 (26%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L FSGG D+S C+ +++D V T D GQ E+ + K+I
Sbjct: 2 DKVVLAFSGGLDTSVCVKLLEEKYDVEVITACVDVGQ-GDEEIAKAEKMAKEIGGY---- 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT------ 121
+ + + + ++ + + + + P L A
Sbjct: 57 -----KHYTIDAKE--EFANEYIARGIKANAEYEGYP-----------LSTALARPLIAQ 98
Query: 122 ----LAYRLGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL- 172
+A + G T I G C E I L M S + + P+
Sbjct: 99 KIIDIAKKEGATAIAHG-----------CTGKGNDQF--RFEAVI-LAM-SDLDIIAPIR 143
Query: 173 -MWLKKYETWKLAQDIGGQDLVNLILE 198
+ L + E A + G + + I
Sbjct: 144 ELNLTRTEEQAYAAEKGIKLNSDKIYS 170
>gi|148984615|ref|ZP_01817883.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP3-BS71]
gi|147923006|gb|EDK74121.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP3-BS71]
gi|301799872|emb|CBW32447.1| putative thiamine biosynthesis protein [Streptococcus pneumoniae
OXC141]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|149002419|ref|ZP_01827353.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP14-BS69]
gi|237650536|ref|ZP_04524788.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae CCRI
1974]
gi|237822619|ref|ZP_04598464.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae CCRI
1974M2]
gi|147759356|gb|EDK66348.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP14-BS69]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|148993695|ref|ZP_01823142.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP9-BS68]
gi|148997036|ref|ZP_01824690.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP11-BS70]
gi|149007172|ref|ZP_01830836.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP18-BS74]
gi|149026363|ref|ZP_01836518.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP23-BS72]
gi|168490316|ref|ZP_02714515.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP195]
gi|168490974|ref|ZP_02715117.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae CDC0288-04]
gi|168493036|ref|ZP_02717179.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae CDC3059-06]
gi|168575542|ref|ZP_02721478.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae MLV-016]
gi|221231659|ref|YP_002510811.1| thiamine biosynthesis protein [Streptococcus pneumoniae ATCC
700669]
gi|225854389|ref|YP_002735901.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae JJA]
gi|225856546|ref|YP_002738057.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae P1031]
gi|307067483|ref|YP_003876449.1| thiamine biosynthesis ATP pyrophosphatase [Streptococcus pneumoniae
AP200]
gi|254784233|sp|B8ZNS6|THII_STRPJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|254784235|sp|C1CDN0|THII_STRZJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|254784239|sp|C1CJW9|THII_STRZP RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|147756736|gb|EDK63776.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP11-BS70]
gi|147761210|gb|EDK68177.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP18-BS74]
gi|147927775|gb|EDK78798.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP9-BS68]
gi|147929325|gb|EDK80324.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP23-BS72]
gi|183571358|gb|EDT91886.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP195]
gi|183574697|gb|EDT95225.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae CDC0288-04]
gi|183576929|gb|EDT97457.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae CDC3059-06]
gi|183578625|gb|EDT99153.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae MLV-016]
gi|220674119|emb|CAR68638.1| putative thiamine biosynthesis protein [Streptococcus pneumoniae
ATCC 700669]
gi|225723698|gb|ACO19551.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae JJA]
gi|225725088|gb|ACO20940.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae P1031]
gi|306409020|gb|ADM84447.1| Thiamine biosynthesis ATP pyrophosphatase [Streptococcus pneumoniae
AP200]
gi|332073212|gb|EGI83691.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae GA17570]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|149010486|ref|ZP_01831857.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP19-BS75]
gi|307127568|ref|YP_003879599.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae 670-6B]
gi|147764967|gb|EDK71896.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae SP19-BS75]
gi|306484630|gb|ADM91499.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae 670-6B]
gi|332077295|gb|EGI87757.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae GA17545]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|125717889|ref|YP_001035022.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK36]
gi|189030668|sp|A3CMR7|THII_STRSV RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|125497806|gb|ABN44472.1| Thiamine biosynthesis protein, putative [Streptococcus sanguinis
SK36]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|110802414|ref|YP_699728.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens SM101]
gi|110682915|gb|ABG86285.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens SM101]
Length = 469
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 15/105 (14%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
N +IK L+ SGG DS L + + V + + + E L
Sbjct: 12 NSMIKSGDKVLVALSGGPDSVCLLHILSELKELLHIEVYAAHVN----HCLRGESALKDE 67
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
+ EL + DI+ S +N++ ++
Sbjct: 68 AYVEELCKNLNIKCFVKRV-------DINKISEEQNISTEMAGRE 105
>gi|76787749|ref|YP_330013.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae A909]
gi|123601586|sp|Q3K0E0|THII_STRA1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|76562806|gb|ABA45390.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae A909]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|25011484|ref|NP_735879.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
NEM316]
gi|44888494|sp|Q8E4F9|THII_STRA3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|24413022|emb|CAD47101.1| Unknown [Streptococcus agalactiae NEM316]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|22537519|ref|NP_688370.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
2603V/R]
gi|44888491|sp|Q8DYV1|THII_STRA5 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|22534400|gb|AAN00243.1|AE014255_1 thiamine biosynthesis protein ThiI [Streptococcus agalactiae
2603V/R]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|15902828|ref|NP_358378.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae R6]
gi|116516659|ref|YP_816262.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae D39]
gi|32171826|sp|Q8DQ92|THII_STRR6 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|122278852|sp|Q04L36|THII_STRP2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|15458381|gb|AAK99588.1| Thiamin biosynthesis protein [Streptococcus pneumoniae R6]
gi|116077235|gb|ABJ54955.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae D39]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|77408236|ref|ZP_00784980.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae COH1]
gi|77173177|gb|EAO76302.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae COH1]
Length = 384
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 159 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 189
>gi|77412106|ref|ZP_00788431.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
CJB111]
gi|77161862|gb|EAO72848.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
CJB111]
Length = 384
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 159 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 189
>gi|77406385|ref|ZP_00783446.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae H36B]
gi|77175009|gb|EAO77817.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae H36B]
Length = 384
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 159 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 189
>gi|76797722|ref|ZP_00779990.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
18RS21]
gi|77414613|ref|ZP_00790753.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae 515]
gi|76586946|gb|EAO63436.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
18RS21]
gi|77159326|gb|EAO70497.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae 515]
Length = 384
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 159 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 189
>gi|15900764|ref|NP_345368.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae TIGR4]
gi|111657952|ref|ZP_01408660.1| hypothetical protein SpneT_02000871 [Streptococcus pneumoniae
TIGR4]
gi|148988307|ref|ZP_01819754.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP6-BS73]
gi|168484767|ref|ZP_02709712.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae CDC1873-00]
gi|168485831|ref|ZP_02710339.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae CDC1087-00]
gi|182683800|ref|YP_001835547.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
CGSP14]
gi|194398118|ref|YP_002037517.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae G54]
gi|225861227|ref|YP_002742736.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
Taiwan19F-14]
gi|298231041|ref|ZP_06964722.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255717|ref|ZP_06979303.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298503113|ref|YP_003725053.1| thiamine-phosphate kinase [Streptococcus pneumoniae TCH8431/19A]
gi|303255279|ref|ZP_07341350.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS455]
gi|303260406|ref|ZP_07346375.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP-BS293]
gi|303262763|ref|ZP_07348701.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP14-BS292]
gi|303265052|ref|ZP_07350966.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS397]
gi|303267118|ref|ZP_07352987.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS457]
gi|20140719|sp|Q97RE1|THII_STRPN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|226729113|sp|B5E3Y2|THII_STRP4 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|238691150|sp|B2IP11|THII_STRPS RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|254784240|sp|C1CS14|THII_STRZT RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|14972354|gb|AAK75008.1| thiazole biosynthesis protein ThiI [Streptococcus pneumoniae TIGR4]
gi|147925988|gb|EDK77062.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP6-BS73]
gi|172042057|gb|EDT50103.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae CDC1873-00]
gi|182629134|gb|ACB90082.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
CGSP14]
gi|183571054|gb|EDT91582.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae CDC1087-00]
gi|194357785|gb|ACF56233.1| Probable thiamine biosynthesis protein thiI [Streptococcus
pneumoniae G54]
gi|225728072|gb|ACO23923.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae Taiwan19F-14]
gi|298238708|gb|ADI69839.1| thiamine-phosphate kinase [Streptococcus pneumoniae TCH8431/19A]
gi|301794014|emb|CBW36412.1| putative thiamine biosynthesis protein [Streptococcus pneumoniae
INV104]
gi|301801707|emb|CBW34413.1| putative thiamine biosynthesis protein [Streptococcus pneumoniae
INV200]
gi|302597748|gb|EFL64823.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS455]
gi|302636085|gb|EFL66582.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP14-BS292]
gi|302638441|gb|EFL68907.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
SP-BS293]
gi|302643326|gb|EFL73604.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS457]
gi|302645412|gb|EFL75645.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS397]
gi|327390234|gb|EGE88577.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae GA04375]
gi|332076165|gb|EGI86631.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae GA41301]
gi|332201344|gb|EGJ15414.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae GA47368]
gi|332202740|gb|EGJ16809.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae GA41317]
gi|332204884|gb|EGJ18949.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pneumoniae GA47901]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|320546992|ref|ZP_08041293.1| thiamine biosynthesis protein ThiI [Streptococcus equinus ATCC
9812]
gi|320448394|gb|EFW89136.1| thiamine biosynthesis protein ThiI [Streptococcus equinus ATCC
9812]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 173 PVGTAGRGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|306831631|ref|ZP_07464789.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|325978535|ref|YP_004288251.1| putative thiamine biosynthesis protein thiI [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|304426416|gb|EFM29530.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|325178463|emb|CBZ48507.1| putative thiamine biosynthesis protein thiI [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 173 PVGTAGRGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|306833773|ref|ZP_07466899.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
bovis ATCC 700338]
gi|304424110|gb|EFM27250.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
bovis ATCC 700338]
Length = 362
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 173 PVGTAGRGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|288905545|ref|YP_003430767.1| thiamine biosynthesis protein ThiI [Streptococcus gallolyticus
UCN34]
gi|288732271|emb|CBI13838.1| Putative thiamine biosynthesis protein ThiI [Streptococcus
gallolyticus UCN34]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 173 PVGTAGRGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|205822016|sp|Q12N64|MNMA_SHEDO RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 372
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
I ++ SGG DSS + + VE L
Sbjct: 5 KPIHNGKKVIVGMSGGVDSSVSAYLLMQQGYEVEGL 40
>gi|253700862|ref|YP_003022051.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sp. M21]
gi|251775712|gb|ACT18293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter sp. M21]
Length = 359
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
M+D K L+ SGG DSS + ++ V +S
Sbjct: 1 MSDKSLK-KRILVAMSGGVDSSVTAALLKEQGHDVIGVS 38
>gi|171779874|ref|ZP_02920778.1| hypothetical protein STRINF_01661 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281222|gb|EDT46657.1| hypothetical protein STRINF_01661 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 404
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS AL R +E + F
Sbjct: 173 PVGTAGRGMLMLSGGIDSPVAGYLALKRGVDIEAVHF 209
>gi|147676532|ref|YP_001210747.1| ATPase [Pelotomaculum thermopropionicum SI]
gi|146272629|dbj|BAF58378.1| predicted ATPase [Pelotomaculum thermopropionicum SI]
Length = 473
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 39/142 (27%), Gaps = 26/142 (18%)
Query: 2 NDIIKKAPSALLLFSGGQDSST---CLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
+ ++++ L+ SGG DS L + + + + +
Sbjct: 14 HRMVERGCKVLVAVSGGPDSVALLHALYLLKEELEISLHVAHLN----HMFRGAESEAEA 69
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ ++ ++ + A S+ ++ R F
Sbjct: 70 LFVADMARRYGLPATVEARDVPAYQKQSGLSAQAAAREVR------------FR---FFS 114
Query: 118 FAATLAYRLGITNIVIGVCETD 139
AA A G + + + D
Sbjct: 115 EAAGKA---GASRVALAHHADD 133
>gi|56752503|ref|YP_173204.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus elongatus PCC
6301]
gi|81300318|ref|YP_400526.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus elongatus PCC
7942]
gi|81561195|sp|Q5MZ36|MNMA_SYNP6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|123556790|sp|Q31N30|MNMA_SYNE7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|56687462|dbj|BAD80684.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Synechococcus elongatus PCC 6301]
gi|81169199|gb|ABB57539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Synechococcus elongatus PCC 7942]
Length = 357
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + + VE L+
Sbjct: 2 ERVVVGLSGGVDSSVAAALLHRQGYAVEGLT 32
>gi|14521010|ref|NP_126485.1| GMP synthase subunit B [Pyrococcus abyssi GE5]
gi|13626967|sp|Q9V0I7|GUAAB_PYRAB RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|5458227|emb|CAB49716.1| guaA-C GMP synthase [glutamine-hydrolyzing] pyrophosphatase
subunit (EC 6.3.5.2) [Pyrococcus abyssi GE5]
Length = 308
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 10 SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYG 43
A++ SGG DSST A D++ + + G
Sbjct: 22 KAIIALSGGVDSSTAAVLAYKAIGDKLHAVFVNTG 56
>gi|307591533|ref|YP_003900332.1| asparagine synthase [Cyanothece sp. PCC 7822]
gi|306986387|gb|ADN18266.1| asparagine synthase [Cyanothece sp. PCC 7822]
Length = 566
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 18/121 (14%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ + + S + SGG DSS + A V T S +G + ELE V +
Sbjct: 229 EYLPQNESVGVYLSGGLDSSCVTALAARLHSASVHTYSIFFGADSPHELEFSSQVAQFCR 288
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
E HIL + + T ++ I D P T VP N + A
Sbjct: 289 ----------TEHHILEITPQQMWNQLPETMAHLDDPIGD---PLT-VP--NYLMAQLAG 332
Query: 121 T 121
Sbjct: 333 G 333
>gi|237809068|ref|YP_002893508.1| tRNA-specific 2-thiouridylase MnmA [Tolumonas auensis DSM 9187]
gi|259495840|sp|C4L952|MNMA_TOLAT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|237501329|gb|ACQ93922.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Tolumonas auensis DSM 9187]
Length = 369
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 74/229 (32%), Gaps = 45/229 (19%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELMPKWK 68
++ SGG DSS + +VE L +N E + C +
Sbjct: 8 KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDSDEYCSAATDLADAQAVC 63
Query: 69 DSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---------FLVF 118
D LG H + + + +A + + PN P I+ FL F
Sbjct: 64 DKLGIKLHTVN--FAAEYWDNVFELFLA-EYKAGRTPN---PD--ILCNKEIKFKAFLEF 115
Query: 119 AATLAYRLGITNIVIG--VCETDYSGYP------DCRHD---TIRAIETAINLGMESHVT 167
A A LG I G V D +G+P D D + L E
Sbjct: 116 A---AEDLGADYIATGHYVRRDDSTGHPRLLRGLDNNKDQSYFL------YTLSSEQIAQ 166
Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY 216
P+ L+K + +A+ +G + C++G+R G
Sbjct: 167 SLFPVGDLEKPQVRAIAEQLGLATAKKKD--STGICFIGERKFTEFLGR 213
>gi|313665175|ref|YP_004047046.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
leachii PG50]
gi|312949656|gb|ADR24252.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
leachii PG50]
Length = 395
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ L L SGG DS L R +V+ + F
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHF 207
>gi|299535696|ref|ZP_07049017.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lysinibacillus fusiformis ZC1]
gi|298728896|gb|EFI69450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lysinibacillus fusiformis ZC1]
Length = 374
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V +
Sbjct: 11 RVVVGMSGGVDSSVAAYLLKQQGYEVIGI 39
>gi|239637572|ref|ZP_04678544.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus warneri L37603]
gi|239596790|gb|EEQ79315.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus warneri L37603]
Length = 372
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS ++ V +
Sbjct: 1 MTNQDTRVVVGMSGGVDSSVTAYLLKEQGYDVIGI 35
>gi|239626056|ref|ZP_04669087.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridiales bacterium 1_7_47_FAA]
gi|239520286|gb|EEQ60152.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridiales bacterium 1_7_47FAA]
Length = 358
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ SGG DSS + V ++
Sbjct: 1 MSKKVVVGMSGGVDSSVAAWLLKQQGYDVIGVT 33
>gi|254168734|ref|ZP_04875576.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
gi|289596819|ref|YP_003483515.1| PP-loop domain protein [Aciduliprofundum boonei T469]
gi|197622360|gb|EDY34933.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
gi|289534606|gb|ADD08953.1| PP-loop domain protein [Aciduliprofundum boonei T469]
Length = 308
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 25/141 (17%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFD-----RVETLSFDYGQRNKVELECRLCVRKKI 60
KK L+ SGG+DS + F + ++ D E R+
Sbjct: 45 KKGDKILIAVSGGKDSMLTMYQMHKIFGKWRDLELVAVTVD---------EGIGDFRRNC 95
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVF 118
++ + LG +H + + +T + ++ P T+ V R +
Sbjct: 96 AKVANIYARELGIEH--EVITFKEYLG--ITTDDVARVDKELKPCTYCGV-FRRKVL--- 147
Query: 119 AATLAYRLGITNIVIGVCETD 139
A +G +++G+ D
Sbjct: 148 -NMYAKEIGANYLILGLNLDD 167
>gi|169829330|ref|YP_001699488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lysinibacillus sphaericus C3-41]
gi|205816875|sp|B1HUL3|MNMA_LYSSC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|168993818|gb|ACA41358.1| Probable tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lysinibacillus sphaericus C3-41]
Length = 374
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V +
Sbjct: 11 RVVVGMSGGVDSSVAAYLLKQQGYEVIGI 39
>gi|83319792|ref|YP_424226.1| thiamine biosynthesis protein ThiI [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|83283678|gb|ABC01610.1| thiamine biosynthesis protein ThiI [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 395
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ L L SGG DS L R +V+ + F
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHF 207
>gi|42560828|ref|NP_975279.1| thiamin biosynthesis protein [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|42492324|emb|CAE76921.1| Thiamin biosynthesis protein [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|301321417|gb|ADK70060.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
mycoides subsp. mycoides SC str. Gladysdale]
Length = 395
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ L L SGG DS L R +V+ + F
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHF 207
>gi|317154426|ref|YP_004122474.1| hypothetical protein Daes_2732 [Desulfovibrio aespoeensis Aspo-2]
gi|316944677|gb|ADU63728.1| hypothetical protein Daes_2732 [Desulfovibrio aespoeensis Aspo-2]
Length = 354
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + AL L SGG DS + +D+ V L F
Sbjct: 1 MNRKYDALALLSGGLDSILAMRTVMDQGLAVLGLHF 36
>gi|217076484|ref|YP_002334200.1| thiamine biosynthesis protein ThiI [Thermosipho africanus TCF52B]
gi|217036337|gb|ACJ74859.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermosipho
africanus TCF52B]
Length = 389
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 26/200 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +LL SGG DS + + R +ETLSF E ++ +
Sbjct: 169 PVGSSGKGILLLSGGIDSPVAGWYMMKRGILIETLSFLSPPFTS---EKSKNKILELSNI 225
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K+ + I+P + ++ ++ IQ + + A LA
Sbjct: 226 LSKYVPDTLKTWIVPFTPVQQYIKTNAPDKYSLIIQRRS------------MMRIANKLA 273
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
++ I+ G + + +E + S++ V PL+ +K + +
Sbjct: 274 KKIKAKAIITGENVGQVAS---------QTLENLHTIESASNLPVLRPLIGFEKIDIVEK 324
Query: 184 AQDIGGQDLVNLILEESHTC 203
A++IG ++ + +C
Sbjct: 325 AKEIGSYEISIQPYLD--SC 342
>gi|322381177|ref|ZP_08055180.1| tRNAile lysidine synthetase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154753|gb|EFX47024.1| tRNAile lysidine synthetase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 479
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 26/142 (18%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVR 57
++ + + ++ SGG DS L ++ +V + ++ E
Sbjct: 14 QNLFQGGDTVVVAVSGGPDSIALLHMLYRLSDEQGWKVIAAHVN----HQFRKEESAEEA 69
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
K ++ I A + + S + + + FL
Sbjct: 70 KYVMSFASGLGIPCEVGVIDVPAYIRETSLNPQVAAREKRYE---------------FL- 113
Query: 118 FAATLAYRLGITNIVIGVCETD 139
+A I + D
Sbjct: 114 --HKIANVYNADKIALAHHADD 133
>gi|313680731|ref|YP_004058470.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanithermus profundus DSM 14977]
gi|313153446|gb|ADR37297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Oceanithermus profundus DSM 14977]
Length = 369
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRV 35
K P L+ SGG DSS + +++ V
Sbjct: 2 KKPRVLVAMSGGVDSSVAAALLVEQGYDV 30
>gi|302344576|ref|YP_003809105.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Desulfarculus baarsii DSM 2075]
gi|301641189|gb|ADK86511.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Desulfarculus baarsii DSM 2075]
Length = 340
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 10/72 (13%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DS+ V L+ L R+ + E +
Sbjct: 6 VALSGGVDSTVAALMLRRAGHEVIGLT----------LALGAGPRRALTEAAEAARALGL 55
Query: 73 EDHILPLAILGD 84
++ +A +
Sbjct: 56 THQVIDVAAAFE 67
>gi|293977825|ref|YP_003543255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Sulcia muelleri DMIN]
gi|292667756|gb|ADE35391.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Sulcia muelleri DMIN]
Length = 380
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY 42
++ SGG DSS + V + Y
Sbjct: 4 KRVIVGMSGGVDSSVAALLLKKQGYDVIGIFMKY 37
>gi|302874196|ref|YP_003842829.1| argininosuccinate synthase [Clostridium cellulovorans 743B]
gi|307689543|ref|ZP_07631989.1| argininosuccinate synthase [Clostridium cellulovorans 743B]
gi|302577053|gb|ADL51065.1| argininosuccinate synthase [Clostridium cellulovorans 743B]
Length = 405
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-M 64
K +L +SGG D+S ++W + + + +S D GQ + E+ ++ +L +
Sbjct: 5 KIKKVVLAYSGGLDTSVIITWLKENYNCEIVAVSGDVGQGDDYEVLKEKAIKTGASKLYI 64
Query: 65 PKWKDSLGEDHILPLAILGDISHS 88
K+ E++I P G + +
Sbjct: 65 ADLKEEFVEEYIFPTLKAGAVYEN 88
>gi|222445379|ref|ZP_03607894.1| hypothetical protein METSMIALI_01007 [Methanobrevibacter smithii
DSM 2375]
gi|222434944|gb|EEE42109.1| hypothetical protein METSMIALI_01007 [Methanobrevibacter smithii
DSM 2375]
Length = 391
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 34/137 (24%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L FSGG D+S C+ +++D V T D GQ E+ + K+I
Sbjct: 2 DKVVLAFSGGLDTSVCVKLLEEKYDVEVITACVDVGQ-GDEEIAKAEKMAKEIGGY---- 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT------ 121
+ + + + ++ + + + + P L A
Sbjct: 57 -----KHYTIDAKE--EFANEYIARGIKANAEYEGYP-----------LSTALARPLIAQ 98
Query: 122 ----LAYRLGITNIVIG 134
+A + G T I G
Sbjct: 99 KIIDIAKKEGATAIAHG 115
>gi|167465338|ref|ZP_02330427.1| tRNA(Ile)-lysidine synthetase [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 424
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 26/142 (18%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVR 57
++ + + ++ SGG DS L ++ +V + ++ E
Sbjct: 14 QNLFQGGDTVVVAVSGGPDSIALLHMLYRLSDEQGWKVIAAHVN----HQFRKEESAEEA 69
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
K ++ I A + + S + + + FL
Sbjct: 70 KYVMSFASGLGIPCEVGVIDVPAYIRETSLNPQVAAREKRYE---------------FL- 113
Query: 118 FAATLAYRLGITNIVIGVCETD 139
+A I + D
Sbjct: 114 --HKIANVYNADKIALAHHADD 133
>gi|156976457|ref|YP_001447363.1| NAD synthetase [Vibrio harveyi ATCC BAA-1116]
gi|189030738|sp|A7N654|NADE_VIBHB RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|156528051|gb|ABU73136.1| hypothetical protein VIBHAR_05230 [Vibrio harveyi ATCC BAA-1116]
Length = 276
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 61/204 (29%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWAL-----------DRFDRVETLSFDYG-QRNKVE 49
+ +L+L SGG DS+TC A D + + YG Q+++ E
Sbjct: 31 KLQDSGCKSLVLGISGGVDSTTCGRLAQLAVDQLNEESDDNGYQFIAVRLPYGEQKDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L T + + N+
Sbjct: 91 AQLALDFIQPTHSVSVNIKAGVDGLHAASHVALEGTGLL-PTDAAKVDLVKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDM 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + ++A +G +L+
Sbjct: 188 APLFGLSKRQVREVAATLGAPELL 211
>gi|71082999|ref|YP_265718.1| argininosuccinate synthase (citrulline--aspartate ligase)
[Candidatus Pelagibacter ubique HTCC1062]
gi|119361303|sp|Q4FNX4|ASSY_PELUB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|71062112|gb|AAZ21115.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
[Candidatus Pelagibacter ubique HTCC1062]
Length = 395
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+K +L +SGG D+S L W + +D V + D GQ +++ + + K++
Sbjct: 1 MKSKKKIVLAYSGGLDTSIILKWLQENYDAEVICYTADVGQ--EIDRKKIIKNAKRLGVK 58
Query: 63 --LMPKWKDSLGEDHILPLAILGDI 85
++ KD+ +D++ P+ I
Sbjct: 59 NIIIEDLKDTFVKDYVFPMIRGHAI 83
>gi|319900441|ref|YP_004160169.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides helcogenes P 36-108]
gi|319415472|gb|ADV42583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides helcogenes P 36-108]
Length = 353
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----GQRNKVELECRLCVRKKI 60
+K LL SGG DSS + V ++F + G +E L R I
Sbjct: 1 MKSKEHVLLGMSGGTDSSVAAMRLQEAGYEVTGVTFRFYEADGGTEYLEDARALAARLGI 60
Query: 61 VELMPKWKDSLGEDHI 76
+ +++ E I
Sbjct: 61 GHITYDAREAFRERVI 76
>gi|308491228|ref|XP_003107805.1| hypothetical protein CRE_12780 [Caenorhabditis remanei]
gi|308249752|gb|EFO93704.1| hypothetical protein CRE_12780 [Caenorhabditis remanei]
Length = 378
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
K P ++ SGG DS+ R V +
Sbjct: 2 KIPRVVIGMSGGVDSAVSAFLLKRRGFDVIGVH 34
>gi|307213343|gb|EFN88795.1| Argininosuccinate synthase [Harpegnathos saltator]
Length = 412
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W ++ +V + GQ +L+ KI +
Sbjct: 1 MSDSKKKVILAYSGGLDTSCILFWLREKGFQVVAYVANIGQ--NEDLDAVRKKALKIGAV 58
>gi|284164051|ref|YP_003402330.1| GMP synthase, large subunit [Haloterrigena turkmenica DSM 5511]
gi|284013706|gb|ADB59657.1| GMP synthase, large subunit [Haloterrigena turkmenica DSM 5511]
Length = 305
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 23/114 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETL-----------------SFDYGQRNKVEL 50
+A++ SGG DSS + A + DR+ + +FDY +E
Sbjct: 22 ENAVIALSGGVDSSVAAALAYEAIGDRLTPVYVDTGLMRKGETDQIRETFDY-----MES 76
Query: 51 ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
+ + + +E + D + I+ + + + + +Q P
Sbjct: 77 LRIVDAKDRFLEALAGVTDPEEKREIIGEQFIREFEREAKDADADYLVQGTIYP 130
>gi|284035340|ref|YP_003385270.1| Argininosuccinate synthase [Spirosoma linguale DSM 74]
gi|283814633|gb|ADB36471.1| Argininosuccinate synthase [Spirosoma linguale DSM 74]
Length = 400
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 39/130 (30%), Gaps = 14/130 (10%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ +L FSGG D S + DR V ++ D G + EL+ +
Sbjct: 1 MSQKVVLAFSGGLDTSFCVKYLSEDRGMDVYSVLVDTGGFSDAELKAIEERAYSLGVKSH 60
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
+ + L L + + + IF AA A
Sbjct: 61 VTISKTDDYYQQCLKFL-VFGNVLKNNTYPLSVSAER-----------IFQAIAAAEYAR 108
Query: 125 RLGITNIVIG 134
+G + I G
Sbjct: 109 EIGASAIAHG 118
>gi|120553850|ref|YP_958201.1| tRNA(Ile)-lysidine synthetase [Marinobacter aquaeolei VT8]
gi|120323699|gb|ABM18014.1| tRNA(Ile)-lysidine synthetase [Marinobacter aquaeolei VT8]
Length = 445
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DSS L + RV L + ++++ + ++L L
Sbjct: 32 VALSGGLDSSLLLHVVAAAYPRVRALHIN----HQLQ-SNHDQTERACIDLCAGLGVELQ 86
Query: 73 EDHILPLAILGDISHSSLTKNVAM 96
+ G + S+ +
Sbjct: 87 VRRVNVATGAGSLEESARAARYEV 110
>gi|146304773|ref|YP_001192089.1| putative ATP binding protein [Metallosphaera sedula DSM 5348]
gi|145703023|gb|ABP96165.1| putative ATP binding protein [Metallosphaera sedula DSM 5348]
Length = 222
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETL 38
LFSGG+DS+ L WA+ + VE L
Sbjct: 6 LFSGGKDSTFALHWAVLKGFEVECL 30
>gi|17538240|ref|NP_502120.1| hypothetical protein B0035.16 [Caenorhabditis elegans]
gi|20141962|sp|Q17440|MTU1_CAEEL RecName: Full=Probable mitochondrial tRNA-specific
2-thiouridylase 1
gi|13548315|emb|CAA97418.2| C. elegans protein B0035.16, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 375
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
P ++ SGG DS+ R V L
Sbjct: 2 PRVVIGMSGGVDSAVSAFLLKKRGFDVIGLH 32
>gi|28377631|ref|NP_784523.1| argininosuccinate synthase [Lactobacillus plantarum WCFS1]
gi|254555810|ref|YP_003062227.1| argininosuccinate synthase [Lactobacillus plantarum JDM1]
gi|300767600|ref|ZP_07077510.1| argininosuccinate synthase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308179791|ref|YP_003923919.1| argininosuccinate synthase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|30172775|sp|P59603|ASSY_LACPL RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|28270464|emb|CAD63366.1| argininosuccinate synthase [Lactobacillus plantarum WCFS1]
gi|254044737|gb|ACT61530.1| argininosuccinate synthase [Lactobacillus plantarum JDM1]
gi|300494585|gb|EFK29743.1| argininosuccinate synthase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045282|gb|ADN97825.1| argininosuccinate synthase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 411
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++K+ +L +SGG D+S +SW D+ V D G
Sbjct: 1 MVKQNDKIILAYSGGLDTSVAISWLKDKGYDVVACGIDVG 40
>gi|11499833|ref|NP_071077.1| argininosuccinate synthase [Archaeoglobus fulgidus DSM 4304]
gi|5915699|sp|O28032|ASSY_ARCFU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|2648273|gb|AAB89005.1| argininosuccinate synthetase (argG) [Archaeoglobus fulgidus DSM
4304]
Length = 390
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQ 44
+L +SGG D++ C+ +++ D V T++ D GQ
Sbjct: 2 KVVLSYSGGLDTTVCIPLLKEKYGFDEVITVTVDIGQ 38
>gi|85708990|ref|ZP_01040056.1| argininosuccinate synthase [Erythrobacter sp. NAP1]
gi|85690524|gb|EAQ30527.1| argininosuccinate synthase [Erythrobacter sp. NAP1]
Length = 407
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S W ++R V T + D GQ ++E R R +
Sbjct: 1 MSDIKRVVLAYSGGLDTSVIAKWLSVERGLEVVTFTADLGQGEEIE-PAREKARAMGIPD 59
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 60 EHIFIEDLREEFVRD 74
>gi|295105730|emb|CBL03273.1| argininosuccinate synthase [Gordonibacter pamelaeae 7-10-1-b]
Length = 443
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRK 58
+ + A+L +SGG D+S C+ W + + V + D GQ ++ + + K
Sbjct: 1 MADQKEKAVLAYSGGLDTSCCIKWLQENKGVDVIAVVGDVGQEHEGLEKIKQKALK 56
>gi|90579124|ref|ZP_01234934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio angustum S14]
gi|90439957|gb|EAS65138.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio angustum S14]
Length = 371
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS L + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLLQQGYQVEGL 36
>gi|71030526|ref|XP_764905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Theileria parva strain Muguga]
gi|68351861|gb|EAN32622.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative [Theileria parva]
Length = 693
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 13/38 (34%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + +L SGG DSS L R V
Sbjct: 289 MFQSPRSKKRVAVLVSGGVDSSLALWLMKSRAFDVHAF 326
>gi|330446458|ref|ZP_08310110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490649|dbj|GAA04607.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 371
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS L + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLLQQGYQVEGL 36
>gi|323452846|gb|EGB08719.1| hypothetical protein AURANDRAFT_26092 [Aureococcus
anophagefferens]
Length = 465
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSST-CLSWALDRFDRVETLSFDYGQ 44
+ P +L +SGG D+ST A ++ V D GQ
Sbjct: 36 EPDPSKPKIVLAYSGGLDTSTQLAYLAHEKGYEVCAYIADLGQ 78
>gi|303232130|ref|ZP_07318833.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella atypica ACS-049-V-Sch6]
gi|302513236|gb|EFL55275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella atypica ACS-049-V-Sch6]
Length = 353
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 35/136 (25%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF-------DYGQRNKVELECRLCVRKKIVELMP 65
+ SGG DSS + L + +V ++ Y E+ + KK+ + +
Sbjct: 7 VAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPY-----DEVPLAVTDAKKMCDFLG 61
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFLVF 118
E H++ D+ + ++ + PN P +NI + L
Sbjct: 62 I------EHHVID---ARDVFYENVVDYFVKEYAYGRTPN---PCVFCNKNIKFDLMLNR 109
Query: 119 AATLAYRLGITNIVIG 134
A LG T++V G
Sbjct: 110 AL----ELGATHMVTG 121
>gi|89073381|ref|ZP_01159905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photobacterium sp. SKA34]
gi|89050868|gb|EAR56342.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photobacterium sp. SKA34]
Length = 371
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS L + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLLQQGYQVEGL 36
>gi|330016186|ref|ZP_08308416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella sp. MS 92-3]
gi|328529471|gb|EGF56376.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella sp. MS 92-3]
Length = 388
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS L + +VE L
Sbjct: 20 SMSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGL 55
>gi|256027773|ref|ZP_05441607.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium sp. D11]
gi|289765727|ref|ZP_06525105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D11]
gi|289717282|gb|EFD81294.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. D11]
Length = 362
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
D K+ + SGG DSST + + ++
Sbjct: 18 DSSKRNIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|269797937|ref|YP_003311837.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Veillonella parvula DSM 2008]
gi|282850166|ref|ZP_06259545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella parvula ATCC 17745]
gi|269094566|gb|ACZ24557.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Veillonella parvula DSM 2008]
gi|282579659|gb|EFB85063.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Veillonella parvula ATCC 17745]
Length = 353
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 35/136 (25%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF-------DYGQRNKVELECRLCVRKKIVELMP 65
+ SGG DSS + L + +V ++ Y E+ + KK+ + +
Sbjct: 7 VAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPY-----DEVPLAVTDAKKMCDFLG 61
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFLVF 118
E H++ D+ + ++ + PN P +NI + L
Sbjct: 62 I------EHHVID---ARDVFYENVVDYFVKEYAYGRTPN---PCVFCNKNIKFDLMLNR 109
Query: 119 AATLAYRLGITNIVIG 134
A LG T++V G
Sbjct: 110 AL----ELGATHMVTG 121
>gi|192358790|ref|YP_001983095.1| argininosuccinate synthase [Cellvibrio japonicus Ueda107]
gi|190684955|gb|ACE82633.1| argininosuccinate synthase [Cellvibrio japonicus Ueda107]
Length = 405
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W + + V T + D GQ +VE + ++
Sbjct: 1 MSSIKKVVLAYSGGLDTSVIVKWLQENYQCEVVTFTADIGQGEEVEPARAKAQALGVKQI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIDDLREEFVRDFVFPMFRANTIYEGEYLLGTSIA 95
>gi|218778268|ref|YP_002429586.1| argininosuccinate synthase [Desulfatibacillum alkenivorans AK-01]
gi|226729176|sp|B8FH30|ASSY_DESAA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|218759652|gb|ACL02118.1| Argininosuccinate synthetase [Desulfatibacillum alkenivorans
AK-01]
Length = 400
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIV 61
+ K +L +SGG D+S L W ++ + V S D GQ ++E + +
Sbjct: 1 MGKDIKKVVLAYSGGLDTSVILKWLVETYQCEVVAFSADIGQGEELEPVRGKAEASGACA 60
Query: 62 ELMPKWKDSLGEDHILP 78
+ ++ +D++ P
Sbjct: 61 VYIDDLREEFVKDYVFP 77
>gi|149276507|ref|ZP_01882651.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pedobacter sp. BAL39]
gi|149233027|gb|EDM38402.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pedobacter sp. BAL39]
Length = 353
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
SGG DSS ++ V L+ DY E C I + +
Sbjct: 1 MSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYATSGSSSKETGCCSLDSINDARTLAVNYG 60
Query: 72 GEDHILPLAI 81
+IL +
Sbjct: 61 FPHYILDIRD 70
>gi|47210539|emb|CAF90658.1| unnamed protein product [Tetraodon nigroviridis]
Length = 720
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 11 ALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG 43
A +L SGG DS+ C + AL++ ++V + D G
Sbjct: 241 AEVLLSGGVDSTVCTALLNKALNQ-EQVIAVHIDNG 275
>gi|262043152|ref|ZP_06016290.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|259039540|gb|EEW40673.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
Length = 388
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS L + +VE L
Sbjct: 20 SMSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGL 55
>gi|332529830|ref|ZP_08405784.1| argininosuccinate synthase [Hylemonella gracilis ATCC 19624]
gi|332040851|gb|EGI77223.1| argininosuccinate synthase [Hylemonella gracilis ATCC 19624]
Length = 445
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + + KK + K +
Sbjct: 18 FSGGLDTSAALLWMKKKGAEPYAYTANLGQPDESDYDA---IPKKALGYGAKLARLIDCR 74
Query: 75 HILPLAILGDISHSSLTKNV 94
L + + ++ +
Sbjct: 75 RQLAHEGIAALQSNAFHIST 94
>gi|329765762|ref|ZP_08257331.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137828|gb|EGG42095.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 265
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 39/189 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
D + ++ SGG DS+ A + + ++ DY +K ELE K+I
Sbjct: 9 DWFENKNKVMIALSGGVDSALVAYAAFQKLGNSAIAVTADYKTLSKEELETA----KQIC 64
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + + D + + + S + +++ D+ + +
Sbjct: 65 SEIGIKQILVDYDELQNEEFVK--NSSDRCFHCRLELGDHLI-----------------S 105
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYE 179
LA + + IV G D Y R I A+ + +PL+ K E
Sbjct: 106 LAKQHDVEVIVDGTNLDDLGEY---RPG-IEAL---------KKNGISSPLVETRFTKNE 152
Query: 180 TWKLAQDIG 188
A+ +G
Sbjct: 153 IRSTAKSVG 161
>gi|326796754|ref|YP_004314574.1| tRNA sulfurtransferase [Marinomonas mediterranea MMB-1]
gi|326547518|gb|ADZ92738.1| tRNA sulfurtransferase [Marinomonas mediterranea MMB-1]
Length = 483
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 27/190 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I S L L SGG DS+ + R + F+ G + K++
Sbjct: 173 PIGSQDSVLSLISGGFDSTVSSYLTMSRGLKTHFCFFNLGG------DAHEIGVKQVSHF 226
Query: 64 MPKWKDSLGEDHILPLAILGDISH-SSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ S + + ++ + N M + + L A+ +
Sbjct: 227 LWDKYGSNINVKFVTVPFENVVAEILTKVDNSEMGVILKRM-----------MLRAASEV 275
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
L +V G S + + + + V PL+ + K +
Sbjct: 276 MEGLNAKALVTGESVAQVSS---------QTLINLQVIDQVTDNLVIRPLVTMNKQDIID 326
Query: 183 LAQDIGGQDL 192
A +IG +
Sbjct: 327 KAIEIGTEPF 336
>gi|313203848|ref|YP_004042505.1| tRNA (5-methylaminomethyL-2-thiouridylate)-methyltransferase
[Paludibacter propionicigenes WB4]
gi|312443164|gb|ADQ79520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paludibacter propionicigenes WB4]
Length = 346
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
LL SGG DSS L++ V ++F
Sbjct: 1 MKQRILLGMSGGTDSSVAAILLLEQGYEVIGITFR 35
>gi|310658245|ref|YP_003935966.1| trnaile lysidine synthetase [Clostridium sticklandii DSM 519]
gi|308825023|emb|CBH21061.1| tRNAile lysidine synthetase [Clostridium sticklandii]
Length = 464
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 63/215 (29%), Gaps = 52/215 (24%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR---FDR--VETLSFDYGQRNKVELECRLCVR 57
++I+ L+ SGG DS CL AL + + + + +K+ R
Sbjct: 14 NLIENKDKILVALSGGPDS-VCLLHALKKLETYYNIKIYAAHLN----HKI----RGIEA 64
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF-----VPGRN 112
+K K D L + I + K M +++ + V R
Sbjct: 65 QKDALYAAKLCDELDVP-----FFVKAIDVPAYAKEKKMTLEEAARKLRYDMLFEVKNR- 118
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHV- 166
+G I + D + +T IR GM+
Sbjct: 119 -------------IGAKKIAVAHNLDDQA-------ETVIMRLIRGTGITGLKGMDYKRG 158
Query: 167 -TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEES 200
V PLM + K + ++ E+
Sbjct: 159 DGVIRPLMDISKANIVSYCDENKLNPRIDYTNLET 193
>gi|296108939|ref|YP_003615888.1| PP-loop domain protein [Methanocaldococcus infernus ME]
gi|295433753|gb|ADG12924.1| PP-loop domain protein [Methanocaldococcus infernus ME]
Length = 290
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ K L+ SGG+DS +E + G N E+ K+ E
Sbjct: 43 KMLSKDEKILVPISGGKDSHAAAYILKKLGYDIELFHINLGISNFSEISLE-----KVKE 97
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L L HI+ L +I+ ++ K + ++ +
Sbjct: 98 LSNFINAKL---HIVNL---KEITGKTIEDVKGKKCSICGITKRYLMNK----------F 141
Query: 123 AYRLGITNIVIGVCETD 139
Y G IV G D
Sbjct: 142 GYEHGFDTIVTGHNMDD 158
>gi|163841428|ref|YP_001625833.1| asparagine synthetase (glutamine-hydrolyzing) [Renibacterium
salmoninarum ATCC 33209]
gi|162954904|gb|ABY24419.1| asparagine synthetase (glutamine-hydrolyzing) [Renibacterium
salmoninarum ATCC 33209]
Length = 333
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 48/148 (32%), Gaps = 29/148 (19%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS + A F + T + DY Q + E + L
Sbjct: 121 LSGGLDSSLVSAVAAKHFP-LSTFTIDYIDQAH--EFTGDELRVDHDTPFAAETAAFLAT 177
Query: 74 DHILPLAILGDISHSSL------TKNVAMKIQDNNLPNTFVPGR-----NIIFLVFAATL 122
+H + + + +++ + + D N + F+ R N +FL
Sbjct: 178 NHDVLMMDPEQLMDGEYRRAVVRSRDSPIGVGDMNT-SLFLLFRHIAQQNKVFLS----- 231
Query: 123 AYRLGITNIVIG---VCET---DYSGYP 144
G I G T ++S +P
Sbjct: 232 --GEGADEIFAGYPWFNSTAAQEFSRFP 257
>gi|152990183|ref|YP_001355905.1| tRNA-specific 2-thiouridylase MnmA [Nitratiruptor sp. SB155-2]
gi|205816887|sp|A6Q239|MNMA_NITSB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|151422044|dbj|BAF69548.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Nitratiruptor sp. SB155-2]
Length = 339
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 7/72 (9%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ ++ SGG DSS + R V + + R +K I +
Sbjct: 1 MSKKIVVAMSGGVDSSYTANLLQSRGYEVIGVYMKFHPR-------EEYHQKNIANIQKV 53
Query: 67 WKDSLGEDHILP 78
K E H+L
Sbjct: 54 AKHLGIEYHVLD 65
>gi|152969695|ref|YP_001334804.1| tRNA-specific 2-thiouridylase MnmA [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150954544|gb|ABR76574.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 388
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS L + +VE L
Sbjct: 20 SMSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGL 55
>gi|55379313|ref|YP_137163.1| argininosuccinate synthase [Haloarcula marismortui ATCC 43049]
gi|68566235|sp|Q5UZ46|ASSY_HALMA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|55232038|gb|AAV47457.1| argininosuccinate synthase [Haloarcula marismortui ATCC 43049]
Length = 420
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 15 FSGGQDSSTCLSWALDR--FDRVETLSFDYGQ 44
FSGG D++ C+S + +D V ++ D GQ
Sbjct: 12 FSGGLDTTVCVSLLKEEYGYDEVIGVTVDVGQ 43
>gi|67922387|ref|ZP_00515898.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Crocosphaera watsonii WH 8501]
gi|67855731|gb|EAM50979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Crocosphaera watsonii WH 8501]
Length = 349
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 37/135 (27%), Gaps = 28/135 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + + V L+ GQ C + +V+
Sbjct: 3 KVVVGLSGGVDSSVAAASLQHQGYDVIGLTLWLMKGKGQ----------CCSEGMVDAAF 52
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN------VAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ HI+ L + + + N F P L +A
Sbjct: 53 ICEQLGIAHHIVDTRDLFTENIIDYLVSGYESGVTPLPCSQCNRAVKFGP-----MLAYA 107
Query: 120 ATLAYRLGITNIVIG 134
L I G
Sbjct: 108 QA---ELNCDRIATG 119
>gi|288936092|ref|YP_003440151.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella variicola At-22]
gi|290510856|ref|ZP_06550226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella sp. 1_1_55]
gi|288890801|gb|ADC59119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella variicola At-22]
gi|289777572|gb|EFD85570.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella sp. 1_1_55]
Length = 388
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS L + +VE L
Sbjct: 20 SMSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGL 55
>gi|256752431|ref|ZP_05493290.1| NAD+ synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748700|gb|EEU61745.1| NAD+ synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 333
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE---LECRLCVRKKIVELMP 65
A++ SGG DS+ + A++ + L+ R E + R+ +E
Sbjct: 78 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKSDARILADNLGIEFRV 137
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
+ + + ++ ++ +N+ +I+ N L TF+ R
Sbjct: 138 IPIEPVFKSYLSVFNGDNNVIGDLAEENIQARIRGNYL--TFISNR 181
>gi|197334782|ref|YP_002156773.1| tRNA(Ile)-lysidine synthase [Vibrio fischeri MJ11]
gi|197316272|gb|ACH65719.1| tRNA(Ile)-lysidine synthase [Vibrio fischeri MJ11]
Length = 456
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Query: 7 KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYG-QRNKV--ELECR 53
K P ++ SGG DS L +A ++ + ++G ++ E+ C
Sbjct: 30 KKPHLIVALSGGVDSMVLLRLAGMYAKEKQLECMAVHVNHGLSKHASDWEVSCA 83
>gi|154249688|ref|YP_001410513.1| PP-loop domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153624|gb|ABS60856.1| PP-loop domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 323
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 41/142 (28%), Gaps = 20/142 (14%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K L+ S G+DSS L VE L G R+ V K + E
Sbjct: 42 KMFQKEDKVLVAVSSGKDSSAVLYALKKLGYNVEGLFLKMG-RHT---NAAERVVKSLQE 97
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAAT 121
+ + + S + V + + + R
Sbjct: 98 SIGVPINIYDTTQ-----HFHGLGTSEIASIVRRPVCSICGIVRRYWMNR---------- 142
Query: 122 LAYRLGITNIVIGVCETDYSGY 143
A G + +V G D + +
Sbjct: 143 FAVENGFSVLVTGHNLDDEATF 164
>gi|331002457|ref|ZP_08325975.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410273|gb|EGG89707.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae oral taxon
107 str. F0167]
Length = 363
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ SGG DSS + V ++
Sbjct: 2 EKKKVVVGMSGGVDSSVAAYLLKEAGYDVTGVT 34
>gi|163857039|ref|YP_001631337.1| tRNA-specific 2-thiouridylase MnmA [Bordetella petrii DSM 12804]
gi|205811276|sp|A9IQK6|MNMA_BORPD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|163260767|emb|CAP43069.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bordetella petrii]
Length = 376
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS + V L
Sbjct: 12 KGRRVVVGMSGGVDSSVTAWLLKQQGYEVIGL 43
>gi|160881034|ref|YP_001560002.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium phytofermentans ISDg]
gi|205813731|sp|A9KPI9|MNMA_CLOPH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|160429700|gb|ABX43263.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium phytofermentans ISDg]
Length = 357
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + V ++
Sbjct: 2 KKVVVGMSGGVDSSVAAYLLKEAGYDVIGVT 32
>gi|118474439|ref|YP_892017.1| argininosuccinate synthase [Campylobacter fetus subsp. fetus
82-40]
gi|171473002|sp|A0RP84|ASSY_CAMFF RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|118413665|gb|ABK82085.1| argininosuccinate synthase [Campylobacter fetus subsp. fetus
82-40]
Length = 407
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE-- 62
K +L +SGG D+S L W D + V T + D GQ +VE + + I
Sbjct: 4 KDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEEVEPARKKAISLGIKPEN 63
Query: 63 -LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ +D + P+ I ++
Sbjct: 64 IFIEDLREEFVKDFVFPMFRANAIYEGEYLLGTSIA 99
>gi|85714484|ref|ZP_01045472.1| argininosuccinate synthase [Nitrobacter sp. Nb-311A]
gi|85698931|gb|EAQ36800.1| argininosuccinate synthase [Nitrobacter sp. Nb-311A]
Length = 409
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 48/139 (34%), Gaps = 24/139 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ KK +L +SGG D+S L W +D V T + D GQ ++E + I +
Sbjct: 1 MSKKVKKVVLAYSGGLDTSIILKWLQTTYDAEVVTFTADLGQGEELEPARKKAQLLGIKD 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ ++ D++ P+ + ++ + A
Sbjct: 61 ANIFIEDLREEFVRDYVFPMFRANAVYEGQYLLGTSIARP-----------------LIA 103
Query: 120 ---ATLAYRLGITNIVIGV 135
+A ++G + G
Sbjct: 104 KKQIEIAEKVGADAVAHGA 122
>gi|325847124|ref|ZP_08169950.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481096|gb|EGC84141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 369
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + KK ++ SGG DSS + V +
Sbjct: 1 MENKDKKDIKVIVGVSGGVDSSVAALLLKEEGYDVSGI 38
>gi|296451277|ref|ZP_06893017.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile NAP08]
gi|296880371|ref|ZP_06904334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile NAP07]
gi|296259883|gb|EFH06738.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile NAP08]
gi|296428612|gb|EFH14496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile NAP07]
Length = 361
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ SGG DSS + V ++
Sbjct: 1 MFMNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVT 35
>gi|193215981|ref|YP_001997180.1| argininosuccinate synthase [Chloroherpeton thalassium ATCC 35110]
gi|193089458|gb|ACF14733.1| Argininosuccinate synthase [Chloroherpeton thalassium ATCC 35110]
Length = 424
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
M+DI KK AL SGG D+S + W +++D + ++ + GQ+ ++E
Sbjct: 1 MSDI-KKEKIALAY-SGGLDTSVMIKWLAEKYDAEIVAVTGNLGQQKEIE 48
>gi|126698878|ref|YP_001087775.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile 630]
gi|123174593|sp|Q18BE2|MNMA_CLOD6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|115250315|emb|CAJ68137.1| transfer RNA-specific 2-thiouridylase MnmA [Clostridium
difficile]
Length = 361
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ SGG DSS + V ++
Sbjct: 1 MFMNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVT 35
>gi|323486209|ref|ZP_08091537.1| hypothetical protein HMPREF9474_03288 [Clostridium symbiosum
WAL-14163]
gi|323400427|gb|EGA92797.1| hypothetical protein HMPREF9474_03288 [Clostridium symbiosum
WAL-14163]
Length = 275
Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 61/182 (33%), Gaps = 47/182 (25%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCV 56
M D K P + FSGG DSS L A D + V ++F+ + C L
Sbjct: 16 MMDEYGKGPVCIA-FSGGVDSSLLLKIACDNGRKYKTPVYAVTFN----TMLHPACDLDT 70
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII-- 114
KK+ LG +H++ + M+ +N P R +
Sbjct: 71 AKKVAR-------ELGAEHVVI-----------QVDELEMEGMRDNPPE-----RCYLCK 107
Query: 115 --FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET-------AINLGMESH 165
A GIT I+ G E D Y R IRA++ A+ +
Sbjct: 108 KHLFTALLDFAREKGITCILDGTNEDDTHVY---RPG-IRALKELGIISPLALCHITKRQ 163
Query: 166 VT 167
V
Sbjct: 164 VK 165
>gi|268323620|emb|CBH37208.1| conserved hypothetical protein [uncultured archaeon]
Length = 323
Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 26/129 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS----FDYGQRNKVELECRLCVRKKIVELMP 65
AL L SGG DS LD+ V L F + + V K+ +P
Sbjct: 2 KALALLSGGLDSILATKLVLDQGLEVVALQLILPF-----TAEKTDYAGAVAKRF--EIP 54
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
G +++ + S + + ++ L A +A
Sbjct: 55 IIHVEAGAEYLEIIRNPKYGYGSGMNPCIDCH--------SY-------MLREAKRIAEE 99
Query: 126 LGITNIVIG 134
+G I G
Sbjct: 100 IGAEFIFTG 108
>gi|110596963|ref|ZP_01385253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium ferrooxidans DSM 13031]
gi|110341650|gb|EAT60110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium ferrooxidans DSM 13031]
Length = 361
Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ + ++ SGG DS+T V L+
Sbjct: 1 MGEQKKVVVGISGGVDSATTACLLKKAGYAVTGLNIR 37
>gi|329964462|ref|ZP_08301516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides fluxus YIT 12057]
gi|328524862|gb|EGF51914.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides fluxus YIT 12057]
Length = 357
Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 17/133 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+K LL SGG DSS D V ++F + ++
Sbjct: 8 MKSKERVLLGMSGGTDSSVAAMRLQDAGYEVTGVTFRF---------YEKDGATNYLDDA 58
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP---GRNIIFLVFAAT 121
LG +H+ ++ S + + + + P VP N + A
Sbjct: 59 RSLASRLGIEHV--TYDAREMFRSRIIRYFIDEYLAGHTP---VPCTLCNNELKWALLAK 113
Query: 122 LAYRLGITNIVIG 134
+A GI + G
Sbjct: 114 IADEKGIYWVSTG 126
>gi|315649809|ref|ZP_07902892.1| argininosuccinate synthase [Paenibacillus vortex V453]
gi|315274783|gb|EFU38164.1| argininosuccinate synthase [Paenibacillus vortex V453]
Length = 410
Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVELMP 65
+L +SGG D+S L W + +D + + D GQ+ +++ LE + +
Sbjct: 3 KQKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVYID 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+D D I P+ G + ++
Sbjct: 63 DLRDEFANDFIYPMFQAGAMYEGQYLLGTSIA 94
>gi|262306049|gb|ACY45617.1| gln amidotransferase [Hanseniella sp. 'Han2']
Length = 197
Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
L+L SGG DS+ C + + D+V L + G
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALKEDQVIVLHINNG 80
>gi|329724654|gb|EGG61160.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis VCU144]
Length = 372
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGI 35
>gi|328947848|ref|YP_004365185.1| argininosuccinate synthase [Treponema succinifaciens DSM 2489]
gi|328448172|gb|AEB13888.1| Argininosuccinate synthase [Treponema succinifaciens DSM 2489]
Length = 454
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
K +L +SGG D++ + W + + V + D GQ
Sbjct: 34 SKKDKVVLAYSGGLDTTVIIPWLKENYDYDVIAVCIDVGQ 73
>gi|242242895|ref|ZP_04797340.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis W23144]
gi|242233670|gb|EES35982.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis W23144]
Length = 372
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGI 35
>gi|228475220|ref|ZP_04059946.1| tRNA-methyltransferase [Staphylococcus hominis SK119]
gi|228270831|gb|EEK12233.1| tRNA-methyltransferase [Staphylococcus hominis SK119]
Length = 370
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGI 35
>gi|189502542|ref|YP_001958259.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Amoebophilus
asiaticus 5a2]
gi|229470222|sp|B3ETH8|MNMA_AMOA5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|189497983|gb|ACE06530.1| hypothetical protein Aasi_1200 [Candidatus Amoebophilus asiaticus
5a2]
Length = 376
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 4/92 (4%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVEL 63
K L+ SGG DSS ++ + L+ DY + E C I +
Sbjct: 2 KKGRVLVAMSGGIDSSITALLLHEQGYEIVGLTMKTWDYVSSGGRKKETGCCSLDSINDA 61
Query: 64 MPKWKDSLGEDHILPLA-ILGDISHSSLTKNV 94
IL + GD S+ T
Sbjct: 62 RNVAVSLGFPHIILDIREEFGDYVISNFTSEY 93
>gi|209883451|ref|YP_002287308.1| argininosuccinate synthase [Oligotropha carboxidovorans OM5]
gi|226729196|sp|B6JAT0|ASSY_OLICO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|209871647|gb|ACI91443.1| argininosuccinate synthase [Oligotropha carboxidovorans OM5]
Length = 445
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
M+ I+K K + + FSGG D+S L W + RV + + GQ ++ + + +
Sbjct: 1 MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDE---IP 57
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLT 91
+K +E + + L + I +
Sbjct: 58 RKALEFGAEKARLVDCRTQLVHEGIAAIQSGAFH 91
>gi|169350791|ref|ZP_02867729.1| hypothetical protein CLOSPI_01564 [Clostridium spiroforme DSM
1552]
gi|169292499|gb|EDS74632.1| hypothetical protein CLOSPI_01564 [Clostridium spiroforme DSM
1552]
Length = 44
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 6/38 (15%), Positives = 16/38 (42%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+++ + + +L SGG DS+ + + +
Sbjct: 6 SEVTRMSKRVVLGLSGGVDSAVAAYLLKKQGSQAAATT 43
>gi|218782480|ref|YP_002433798.1| hypothetical protein Dalk_4652 [Desulfatibacillum alkenivorans
AK-01]
gi|218763864|gb|ACL06330.1| protein of unknown function DUF814 [Desulfatibacillum alkenivorans
AK-01]
Length = 331
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 39/134 (29%), Gaps = 21/134 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M + KK SAL L SGG DS ++ V +SF + RK
Sbjct: 1 MGEPAKKL-SALGLSSGGLDSILSALVLKEQGIEVSWISF------ETPFFSADNARKA- 52
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
L +IL + ++ + D + + A
Sbjct: 53 ---SADTGIPLITRYILDDYLEMLLNPPAGYGKNMNPCMDCH----------ALMFRLAH 99
Query: 121 TLAYRLGITNIVIG 134
+ +G + G
Sbjct: 100 QVMQEIGADFLFSG 113
>gi|15829094|ref|NP_326454.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma pulmonis UAB CTIP]
gi|25090788|sp|Q98PU6|NADE_MYCPU RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|14090038|emb|CAC13796.1| NH(3)-DEPENDENT NAD(+) SYNTHETASE [Mycoplasma pulmonis]
Length = 257
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 61/194 (31%), Gaps = 38/194 (19%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ + +++ SGG DS+ A F N + + + K+
Sbjct: 28 KVQQANKKGVIVGISGGIDSALVACLAKKAFPE-----------NSLGITMPIGNSMKLD 76
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L + I+ + + + T +V K+ N+ R L A+
Sbjct: 77 FDDIAKLQKLTKLEIINIDLTLSYDALAKTLDVKNKLAKANIKP-----R----LRMASL 127
Query: 122 LAYRLGITNIVIGVCETD--YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
A +V+G D Y GY + G + V + P+ +L K E
Sbjct: 128 YAMAQEKDYLVLGTDNLDEWYLGY------FTK-------YG-DGGVDLL-PISYLTKSE 172
Query: 180 TWKLAQDIGGQDLV 193
LAQ +
Sbjct: 173 VISLAQIYKVDKGI 186
>gi|329944263|ref|ZP_08292522.1| conserved domain protein [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328530993|gb|EGF57849.1| conserved domain protein [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 571
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+P +L SGG DS ++W ++F YG+ E+E V + +
Sbjct: 195 SPRLVLPLSGGLDSRLLVAWLTLHGTLDRAVAFTYGRPGTREVEVSRKVAEAV 247
>gi|327401838|ref|YP_004342677.1| GMP synthase subunit B [Archaeoglobus veneficus SNP6]
gi|327317346|gb|AEA47962.1| GMP synthase (glutamine-hydrolyzing) subunit B [Archaeoglobus
veneficus SNP6]
Length = 303
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 61/195 (31%), Gaps = 41/195 (21%)
Query: 7 KAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A++ SGG DSS C A DR+ + D G + E E + + +
Sbjct: 19 KDGKAIIALSGGVDSSVCTVLAYKAIGDRLIPVFVDTGLMREGEPERVKEIFGHMNLVFV 78
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
KD + + + + + +F+ +A
Sbjct: 79 DAKDE----------FFEALKGVTDPEEKRKIVGE-------------LFVRVFERVAEE 115
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKY 178
++ G + YPD I ++ + +H PL L K
Sbjct: 116 YKAEYLIQG------TIYPD----IIESMGGIKSHHNVGGFPLHYKFKDVIEPLRELYKD 165
Query: 179 ETWKLAQDIGGQDLV 193
E ++A+ +G +
Sbjct: 166 EVREVARYLGLPKEI 180
>gi|253576850|ref|ZP_04854175.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843717|gb|EES71740.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 485
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 37/134 (27%), Gaps = 28/134 (20%)
Query: 12 LLLFSGGQDSSTCLSWALD------RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ SGG DS+ L + ++ + + + + + EL
Sbjct: 30 VVAVSGGVDSTVLLHIMKEIAGDKALGLQLICAHL----HHGLRGDEADRDAEFVRELAE 85
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + A + + S + + + +A R
Sbjct: 86 RLGIPFELGYADVRAYMKETGQSLELAAREKRYE------------------YLHQVAER 127
Query: 126 LGITNIVIGVCETD 139
G ++I + D
Sbjct: 128 YGASSIALAHHADD 141
>gi|268680794|ref|YP_003305225.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Sulfurospirillum deleyianum DSM 6946]
gi|268618825|gb|ACZ13190.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Sulfurospirillum deleyianum DSM 6946]
Length = 339
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 56/178 (31%), Gaps = 29/178 (16%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LL SGG DSS C + V + Y + + + + + + + K LG
Sbjct: 5 LLMSGGIDSSYCAYLLKEEGHEVVGI---YLKLHDDDKKHGVNIAN-----IEKVSQHLG 56
Query: 73 ED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNIIF-LVFAATLAYRLGI 128
HI+ + + + PN P N FA A G
Sbjct: 57 IKTHIID---AKALFKEQIYDYFVRSYEQGLTPN---PCAFCNPKMKFGFAFEKALEFGC 110
Query: 129 TNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYET 180
I G V E D D ++ G++ V + PL +KK E
Sbjct: 111 EKIATGHYARVKEGHIQEAKDKSKD-----QSYFLFGLKREVIEKIIFPLGEMKKEEI 163
>gi|220904367|ref|YP_002479679.1| argininosuccinate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868666|gb|ACL49001.1| Argininosuccinate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 401
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
++ +L +SGG D+S L W ++ + V ++ D GQ
Sbjct: 1 MQDIKKVVLAYSGGLDTSVILKWLIETYKCEVIAVTADLGQ 41
>gi|212225045|ref|YP_002308281.1| GMP synthase subunit B [Thermococcus onnurineus NA1]
gi|212010002|gb|ACJ17384.1| GMP synthase [Thermococcus onnurineus NA1]
Length = 307
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
A++ SGG DSST A D++ + + G
Sbjct: 21 KAIIALSGGVDSSTAAVLAHRAIGDKLHAVFVNTG 55
>gi|197116725|ref|YP_002137152.1| hypothetical protein Gbem_0325 [Geobacter bemidjiensis Bem]
gi|197086085|gb|ACH37356.1| hypothetical protein Gbem_0325 [Geobacter bemidjiensis Bem]
Length = 243
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 70/202 (34%), Gaps = 34/202 (16%)
Query: 3 DIIKKAPSA--LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
DII+ A A +L+FSGG+DS+ + V ++ LE V ++
Sbjct: 17 DIIQSADEANVVLMFSGGRDSTLAAARLNSIGVPVTLVTI-----TSKHLEGIGRVHLRL 71
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVF 118
EL H I + LP + +V V
Sbjct: 72 AELARTLPPGTDWLH---------IEQPDQLQTDTSFYDQTCLPCHHAYV--------VV 114
Query: 119 AATLAYRLGITNIVIGVCETDY-SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
+ +A ++ + + G T Y S +P+ I ++T + + + P+ L
Sbjct: 115 SVAIAKKINASKMAFG--YTHYQSDWPEQTPLAIARLKTTLAR---HGIELLLPVYDLPS 169
Query: 178 YETWKLAQDIGGQDLVNLILEE 199
E +++G L LE+
Sbjct: 170 REVA--IEELGAYGLSTSSLEQ 189
>gi|195475939|ref|XP_002090240.1| GE12995 [Drosophila yakuba]
gi|194176341|gb|EDW89952.1| GE12995 [Drosophila yakuba]
Length = 683
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ LLL SGG DSS C + ++ + D G +RK E +
Sbjct: 228 SNKVLLLVSGGVDSSVCAALLRRALYPNQIIAVHVDNG-----------FMRKNESEKVE 276
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK 92
+ +G D I+ ++ ++ K
Sbjct: 277 RSLRDIGIDLIVRKEGYTFLTGTTQVK 303
>gi|116250590|ref|YP_766428.1| lipopolysaccharide synthesis protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115255238|emb|CAK06313.1| putative lipopolysaccharide synthesis protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 386
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 25/145 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A++ SGG DS+ A R+ + D G ++ + + +K+ +
Sbjct: 66 KPYDAMVGLSGGIDSAFLAHLAARKHGLRLLAVHVDGGWNSEPAVHNIEILVRKLDLDLH 125
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E L +A + S L +++ F A +
Sbjct: 126 TYVIEWQEMRDLQIAFMKA---SVLNQDIPQDHA---------------FFSTLYRTAAK 167
Query: 126 LGITNIVIGVCETDYS------GYP 144
GI + + GV S GYP
Sbjct: 168 FGIRHFLSGVNFASESVIPRGFGYP 192
>gi|32261063|emb|CAE00214.1| WbpG protein [Rhizobium leguminosarum bv. viciae 3841]
Length = 386
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 25/145 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A++ SGG DS+ A R+ + D G ++ + + +K+ +
Sbjct: 66 KPYDAMVGLSGGIDSAFLAHLAARKHGLRLLAVHVDGGWNSEPAVHNIEILVRKLDLDLH 125
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E L +A + S L +++ F A +
Sbjct: 126 TYVIEWQEMRDLQIAFMKA---SVLNQDIPQDHA---------------FFSTLYRTAAK 167
Query: 126 LGITNIVIGVCETDYS------GYP 144
GI + + GV S GYP
Sbjct: 168 FGIRHFLSGVNFASESVIPRGFGYP 192
>gi|47223564|emb|CAF99173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W ++ V T + GQ + E L +K +E
Sbjct: 4 TVVLAYSGGLDTSCILVWLKEQGYDVITFLANVGQDEDFKAAKEKAETLGAKKVFIE 60
>gi|33597091|ref|NP_884734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bordetella parapertussis 12822]
gi|81423061|sp|Q7U375|MNMA_BORPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|33566542|emb|CAE37798.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bordetella parapertussis]
Length = 371
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 13/38 (34%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + ++ SGG DSS + V L
Sbjct: 1 MPSNPTRKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGL 38
>gi|33593833|ref|NP_881477.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bordetella pertussis Tohama I]
gi|33600935|ref|NP_888495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bordetella bronchiseptica RB50]
gi|81423057|sp|Q7U359|MNMA_BORPE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|81423064|sp|Q7U387|MNMA_BORBR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|33563906|emb|CAE43165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bordetella pertussis Tohama I]
gi|33568535|emb|CAE32447.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bordetella bronchiseptica RB50]
gi|332383252|gb|AEE68099.1| tRNA-specific 2-thiouridylase MnmA [Bordetella pertussis CS]
Length = 371
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 13/38 (34%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + ++ SGG DSS + V L
Sbjct: 1 MPSNPTRKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGL 38
>gi|83859053|ref|ZP_00952574.1| argininosuccinate synthase [Oceanicaulis alexandrii HTCC2633]
gi|83852500|gb|EAP90353.1| argininosuccinate synthase [Oceanicaulis alexandrii HTCC2633]
Length = 413
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M+ IKK +L +SGG D+S L W D + V T + D GQ ++E R +
Sbjct: 6 MSQNIKKI---VLAYSGGLDTSVILKWLQDAYQAEVVTFTADLGQGEELEPARRKAEKAG 62
Query: 60 IVELM 64
I ++
Sbjct: 63 IKDIY 67
>gi|332284783|ref|YP_004416694.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pusillimonas sp. T7-7]
gi|330428736|gb|AEC20070.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pusillimonas sp. T7-7]
Length = 379
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + ++ SGG DSS ++ V L
Sbjct: 9 MTKVSATKGRVVIGMSGGVDSSVAAWLLKEQGYDVLGL 46
>gi|328946180|gb|EGG40325.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1087]
Length = 404
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 63/192 (32%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS AL R +E + F KK +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVAIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K + L T R + + G
Sbjct: 233 FGGNIQFIEVPF------TEIQEEIKAKAPEAYLMTLT----R-RFMMRITDRIREERGA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + TI +++ AIN + V P++ + K E ++A+ I
Sbjct: 282 QVIINGESLGQVAS------QTIESMQ-AINAVTNTP--VIRPVVTMDKLEIIEIAEKID 332
Query: 189 GQDLVNLILEES 200
+ E+
Sbjct: 333 TFQISIQPFEDC 344
>gi|327401200|ref|YP_004342039.1| hypothetical protein Arcve_1319 [Archaeoglobus veneficus SNP6]
gi|327316708|gb|AEA47324.1| Conserved hypothetical protein CHP00268 [Archaeoglobus veneficus
SNP6]
Length = 257
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 51/194 (26%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG DS+T + ++ + + +E + + +G +
Sbjct: 20 FSGGVDSATLAALCRKWGIEAIAVTV-----------KTDLMAARDLENAKRVAEEIGIE 68
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-----NIIFLVFAATLAYRLGIT 129
H++ V + + D L NT P R I +A G
Sbjct: 69 HVI----------------VEVAVPDAVLENT--PQRCYYCKKTIIKAI-KDVAESRGF- 108
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
++ G D + R ++A+E E ++ + K E ++A+ +G
Sbjct: 109 RVIDGTNADDLKDF---RPG-LKALEE------EGVISPWA-MAGFTKKEIRRVAKSLG- 156
Query: 190 QDLVNLILEESHTC 203
+++ S++C
Sbjct: 157 ---LSVHNRPSNSC 167
>gi|291548151|emb|CBL21259.1| thiazole biosynthesis/tRNA modification protein ThiI [Ruminococcus
sp. SR1/5]
Length = 393
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 63/199 (31%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
I A+LL SGG DS R +++ + F + +K +
Sbjct: 176 PIGTNGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYF-----HAPPYTSERAKQKVVDLA 230
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ K+ + + I I + + ++ + A
Sbjct: 231 RLVAKYSGPIRLHVVNFTDIQLYIYDQCPHDELTIIMRRY-------------MMRIAEH 277
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
A + ++ G + T++++ + + + V+ P++ K E
Sbjct: 278 FAKKDRCLGLITGESIGQVAS------QTLQSLASTNEVCT---LPVYRPVIGFDKEEIV 328
Query: 182 KLAQDIGGQDLVNLILEES 200
++++ I + E+
Sbjct: 329 RISRKIDTFETSIQPFEDC 347
>gi|260772624|ref|ZP_05881540.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio metschnikovii CIP 69.14]
gi|260611763|gb|EEX36966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio metschnikovii CIP 69.14]
Length = 372
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
N ++ SGG DSS + +VE L
Sbjct: 4 NRSANSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGL 40
>gi|218885978|ref|YP_002435299.1| thiamine biosynthesis protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756932|gb|ACL07831.1| thiamine biosynthesis protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 368
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ +K A+ L SGG DS + ++ V+ L F
Sbjct: 1 MERKRYDAVALLSGGLDSILAVKVIEEQGLAVKCLHF 37
>gi|158530271|gb|ABW71832.1| putative amidotransferase [Streptomyces refuineus subsp.
thermotolerans]
Length = 620
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 14 LFSGGQDSS--TCLSW---ALDRFDRVETLSFDY-GQRNKVELECRLCVRKK-IVELMPK 66
L SGG DSS T L+ A R+ + S D+ GQ VE +R+ +
Sbjct: 265 LLSGGLDSSALTALAQRGLASRGGGRIRSFSVDFVGQ---VENFAPEPLREAPDAPFAAE 321
Query: 67 WKDSLGEDHILPLAILGDIS----HSSLTKNVAMKIQDNNL-PNTFVPGR 111
+G DH + L D++ S++ + + + +L P+ ++ R
Sbjct: 322 LVRHVGTDHRVILLDNADLASPRVRSTVMRAWDLPYGEGDLGPSLYLLFR 371
>gi|148653456|ref|YP_001280549.1| argininosuccinate synthase [Psychrobacter sp. PRwf-1]
gi|172048538|sp|A5WG08|ASSY_PSYWF RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|148572540|gb|ABQ94599.1| argininosuccinate synthase [Psychrobacter sp. PRwf-1]
Length = 411
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 3/100 (3%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRK 58
M+ K + ++L +SGG D+S W D +D V T + D GQ +VE
Sbjct: 1 MSIENKDNINKIVLAYSGGLDTSIIAKWLQDTYDAEVITFTADIGQGEEVEPARAKAEAM 60
Query: 59 KIVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
I + + + D++ P+ I ++
Sbjct: 61 GIKHIHIEDLRAEFARDYVFPMFRANAIYEGEYLLGTSIA 100
>gi|315652097|ref|ZP_07905095.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium saburreum DSM 3986]
gi|315485589|gb|EFU75973.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium saburreum DSM 3986]
Length = 363
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ SGG DSS + V ++
Sbjct: 2 EKKKVVVGMSGGVDSSVAAYLLKEAGYDVTGVT 34
>gi|296192066|ref|XP_002743906.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1
[Callithrix jacchus]
Length = 421
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ A + SGG DS+ R +V +
Sbjct: 1 MQAARHVVCALSGGVDSAVAALLLKRRGYQVTGV 34
>gi|261338173|ref|ZP_05966057.1| tRNA(Ile)-lysidine synthase [Bifidobacterium gallicum DSM 20093]
gi|270276810|gb|EFA22664.1| tRNA(Ile)-lysidine synthase [Bifidobacterium gallicum DSM 20093]
Length = 287
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 26/192 (13%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYG-QRNKVELECRLCV 56
+ + K AP L+ SGG+DS + A R + D+ Q+ E+ R
Sbjct: 38 HQVNKDAPLILVACSGGRDSLALAAAARTVCTSWGLRCGAVIVDHSMQQGSAEVAAR--A 95
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
K+ +L + + E +L + + + + + T V GR
Sbjct: 96 AKQCADLG--LEPVIVERIVLDPQTMRQRGSEAAARQMRYET------ITRVAGRTG--- 144
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
A LA+ + + G + + + V + PL+ L
Sbjct: 145 AEAVLLAHTRNDQAETVLINLLTSGG--------LDGMAGMPERTQIADVALLRPLLDLT 196
Query: 177 KYETWKLAQDIG 188
+ +T ++ + +G
Sbjct: 197 RADTTQICESLG 208
>gi|237753451|ref|ZP_04583931.1| argininosuccinate synthase [Helicobacter winghamensis ATCC
BAA-430]
gi|229375718|gb|EEO25809.1| argininosuccinate synthase [Helicobacter winghamensis ATCC
BAA-430]
Length = 403
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++K ++L +SGG D+S L W D + V T + D GQ +VE R +K ++
Sbjct: 1 MQKNFKKVVLAYSGGLDTSVILKWLGDTYGCEVVTFTADIGQGEEVE-PARAKAQKLGIK 59
Query: 63 LMPKWKDSLGEDHILP 78
+ + L E+ I
Sbjct: 60 PENIFIEDLREEFIRD 75
>gi|159477301|ref|XP_001696749.1| argininosuccinate synthase [Chlamydomonas reinhardtii]
gi|158275078|gb|EDP00857.1| argininosuccinate synthase [Chlamydomonas reinhardtii]
Length = 441
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+ + +L +SGG D+S L W D + V T + D GQ ELE +K+
Sbjct: 37 MGQVKKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQ--GEELEPARAKAEKMGVK 94
Query: 63 --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ + + ++
Sbjct: 95 QIFIDDLREEFVRDYVFPMFRANALYEGTYLLGTSIA 131
>gi|119575282|gb|EAW54887.1| hCG40893, isoform CRA_b [Homo sapiens]
Length = 213
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
+ S +L +SG D+S L W ++ V + GQ+ E E R K
Sbjct: 1 MSTKGSVVLAYSGSLDTSCTLLWLKEQGYDVIAYLANIGQKEDFE-EARKNALK 53
>gi|73748589|ref|YP_307828.1| tRNA-specific 2-thiouridylase MnmA [Dehalococcoides sp. CBDB1]
gi|289432615|ref|YP_003462488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalococcoides sp. GT]
gi|123619640|sp|Q3ZXD7|MNMA_DEHSC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205814533|sp|A5FR85|MNMA_DEHSB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|73660305|emb|CAI82912.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalococcoides sp. CBDB1]
gi|288946335|gb|ADC74032.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dehalococcoides sp. GT]
Length = 357
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 14/85 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-------YGQ-------RNKVE 49
+ + ++ SGG DSS L++ V +S YG E
Sbjct: 1 MSDSSELVMVAMSGGVDSSVTAMLLLEQGYNVAGVSLQLKSNNEPYGNGYNLKLINRARE 60
Query: 50 LECRLCVRKKIVELMPKWKDSLGED 74
+ L + +V+L + + D
Sbjct: 61 VAAALNIPHYVVDLSDIFSQRVIAD 85
>gi|33861847|ref|NP_893408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|81572901|sp|Q7TTQ1|MNMA_PROMP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|33640215|emb|CAE19750.1| tRNA methyl transferase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 390
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
N+ KK ++ SGG DSS + ++ +VE L+
Sbjct: 17 NNKSKKQQKIIVGLSGGVDSSLSAALLIEDGWKVEGLT 54
>gi|15615749|ref|NP_244053.1| argininosuccinate synthase [Bacillus halodurans C-125]
gi|20137501|sp|Q9K820|ASSY_BACHD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|10175810|dbj|BAB06906.1| argininosuccinate synthase (citrulline-asparate ligase) [Bacillus
halodurans C-125]
Length = 409
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMP 65
+L +SGG D+S + W D+ V + D G+ +E ++ +E
Sbjct: 2 SKKKVVLAYSGGLDTSVAIKWLSDKGYDVIAVGLDVGEGKDLEFVKEKALKVGAIESYTI 61
Query: 66 KWKDSLGEDHILP 78
K E+ +LP
Sbjct: 62 DAKKEFAEEFVLP 74
>gi|314936263|ref|ZP_07843610.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus hominis subsp. hominis C80]
gi|313654882|gb|EFS18627.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus hominis subsp. hominis C80]
Length = 370
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGI 35
>gi|303245634|ref|ZP_07331917.1| Thiamine biosynthesis protein-like protein [Desulfovibrio
fructosovorans JJ]
gi|302492897|gb|EFL52762.1| Thiamine biosynthesis protein-like protein [Desulfovibrio
fructosovorans JJ]
Length = 353
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
K+ AL LFSGG DS + + + V L F
Sbjct: 2 KSYHALALFSGGLDSILAVKTVMAQGLDVLCLHF 35
>gi|167534664|ref|XP_001749007.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772431|gb|EDQ86082.1| predicted protein [Monosiga brevicollis MX1]
Length = 783
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
+ +L +SGG D+S L W +++ V D GQ E
Sbjct: 376 TVVLAYSGGLDTSCILCWFIEQGYEVIAYMADIGQAEDFEAARAKA 421
>gi|27468222|ref|NP_764859.1| (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis ATCC 12228]
gi|57867112|ref|YP_188761.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus epidermidis
RP62A]
gi|282875953|ref|ZP_06284820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis SK135]
gi|293366421|ref|ZP_06613099.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis M23864:W2(grey)]
gi|30173406|sp|Q8CSA5|MNMA_STAES RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|71153357|sp|Q5HNS9|MNMA_STAEQ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|27315768|gb|AAO04903.1|AE016748_137 (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis ATCC 12228]
gi|57637770|gb|AAW54558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis RP62A]
gi|281294978|gb|EFA87505.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis SK135]
gi|291319455|gb|EFE59823.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis M23864:W2(grey)]
gi|329735247|gb|EGG71539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis VCU045]
gi|329737370|gb|EGG73624.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis VCU028]
Length = 372
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGI 35
>gi|29336963|sp|Q9K4Z3|ASSY_MORPR RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|8671265|emb|CAB95017.1| argininosuccinate synthetase [Moritella profunda]
Length = 404
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELE--CRLCVRK 58
+ + ++ +SGG D+S L W + +D E ++F D GQ ELE +
Sbjct: 2 KMTQTVKKVVVAYSGGLDTSVILPWLQENYDNCEIVAFVADVGQ-GAEELEGIEAKALAS 60
Query: 59 KIVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
E + KD L E++I P G + + +M
Sbjct: 61 GASECYVVDLKDELVENYIYPTLKTGAVYEGTYLLGTSMA 100
>gi|116619734|ref|YP_821890.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Solibacter
usitatus Ellin6076]
gi|122255775|sp|Q02BG1|MNMA_SOLUE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|116222896|gb|ABJ81605.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Solibacter usitatus Ellin6076]
Length = 371
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVEL 63
+ + P A+ SGG DSS + + V ++ + QR EL + L
Sbjct: 1 MPEQPIAVA-MSGGVDSSVVAAMLVREGRTVVGMTMQLWNQRRLPELAVEGATTGRCCSL 59
Query: 64 MPKWKDSLGEDHI 76
+ + +
Sbjct: 60 DDVYDARRVAEQV 72
>gi|313673848|ref|YP_004051959.1| hypothetical protein Calni_1892 [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940604|gb|ADR19796.1| hypothetical protein Calni_1892 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 233
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 14/68 (20%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLS------FDYGQRNKVELEC 52
M + + SA++ SGG DSS L A ++ ++ F Y E+
Sbjct: 1 MKEYFSRFKSAVVALSGGADSSFTLYLASKYIESKQIVAVTATNSHVFRY------EINQ 54
Query: 53 RLCVRKKI 60
+ +++
Sbjct: 55 ARSIAERL 62
>gi|262368656|ref|ZP_06061985.1| argininosuccinate synthetase [Acinetobacter johnsonii SH046]
gi|262316334|gb|EEY97372.1| argininosuccinate synthetase [Acinetobacter johnsonii SH046]
Length = 447
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + + + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEAYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LVDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|261349498|ref|ZP_05974915.1| PP-loop family protein [Methanobrevibacter smithii DSM 2374]
gi|288861862|gb|EFC94160.1| PP-loop family protein [Methanobrevibacter smithii DSM 2374]
Length = 336
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG------QRNKVELECRL 54
+ + IK A+ FSGG DS+ A D+ ++ D ++ +
Sbjct: 10 VENTIKNRKIAIA-FSGGADSTLLAYLASKVSDKPIAITIDNHIFPTGFIKHCKKTAKEF 68
Query: 55 CVRKKIVELMPKWKDSLGEDH 75
++ K+++L ++L +
Sbjct: 69 GIKHKVIDLNFYEHENLLSNK 89
>gi|205822469|sp|A6T7K3|MNMA_KLEP7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 368
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS L + +VE L
Sbjct: 1 MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGL 35
>gi|149377768|ref|ZP_01895501.1| NAD synthase [Marinobacter algicola DG893]
gi|149357940|gb|EDM46429.1| NAD synthase [Marinobacter algicola DG893]
Length = 550
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDRF--DRVETLS--FDYGQRNKVELECRLCVRK 58
+ K +++L SGG DS+ L+ A D DRV + F Y +E V
Sbjct: 286 VNKNGFKSVVLGLSGGIDSAVTLAIAADALGADRVRAVMMPFRYTSGMSIEDAEAEAVAL 345
Query: 59 KI 60
+
Sbjct: 346 GV 347
>gi|159046012|ref|YP_001534806.1| argininosuccinate synthase [Dinoroseobacter shibae DFL 12]
gi|189046388|sp|A8LPE0|ASSY_DINSH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|157913772|gb|ABV95205.1| argininosuccinate synthase [Dinoroseobacter shibae DFL 12]
Length = 406
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W +D V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYDCEVVTFTADLGQ--GEELEPARAKAEMMGAS 58
Query: 64 MPKWKD 69
+D
Sbjct: 59 AIYIED 64
>gi|91762579|ref|ZP_01264544.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
[Candidatus Pelagibacter ubique HTCC1002]
gi|91718381|gb|EAS85031.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
[Candidatus Pelagibacter ubique HTCC1002]
Length = 395
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K +L +SGG D+S L W + +D V + D GQ E++ RKKI++
Sbjct: 1 MKSKKKIVLAYSGGLDTSIILKWLQENYDAEVICYTADVGQ----EID-----RKKIIKN 51
Query: 64 MPKWKDSLGEDHILPLAILGDI 85
+ L + D
Sbjct: 52 AKRLGVKNIIIENLKDTFVKDY 73
>gi|94984899|ref|YP_604263.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Deinococcus geothermalis DSM 11300]
gi|205816613|sp|Q1J090|MNMA_DEIGD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|94555180|gb|ABF45094.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Deinococcus geothermalis DSM 11300]
Length = 381
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE 36
M+ K + L SGG DSS + D +V
Sbjct: 1 MSGQDKASQRVLCAMSGGVDSSVTAALLKDAGYQVI 36
>gi|317051783|ref|YP_004112899.1| hypothetical protein Selin_1613 [Desulfurispirillum indicum S5]
gi|316946867|gb|ADU66343.1| hypothetical protein Selin_1613 [Desulfurispirillum indicum S5]
Length = 335
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
K P L +SGG DS+ ++ V + F
Sbjct: 2 KKPKVLAAYSGGLDSTLAARVMVELGFEVLAIQF 35
>gi|304312856|ref|YP_003812454.1| Argininosuccinate synthase [gamma proteobacterium HdN1]
gi|301798589|emb|CBL46819.1| Argininosuccinate synthase [gamma proteobacterium HdN1]
Length = 404
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + + V T + D GQ ++E + I E+
Sbjct: 1 MSDIKKVVLAYSGGLDTSIILKWLQENYQCEVVTFTADLGQGEELEPARQKAAGLGIKEI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ D + P+
Sbjct: 61 YIEDLREEFARDFVFPM 77
>gi|291004319|ref|ZP_06562292.1| asparagine synthase [Saccharopolyspora erythraea NRRL 2338]
Length = 642
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 1 MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
M D + K A + SGG DS+ + A + + T + + ++ E++
Sbjct: 257 MRDSVAKHMRADVTVGAFLSGGIDSTAIAALAKEHNPNLITFTTGFERQGYSEVDVAAES 316
Query: 57 RKKI 60
I
Sbjct: 317 AAAI 320
>gi|256092379|ref|XP_002581921.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt ransferase
[Schistosoma mansoni]
gi|238668268|emb|CAZ38161.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt
ransferase,putative [Schistosoma mansoni]
Length = 313
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG 43
D + A++ SGG DSS +V ++ YG
Sbjct: 13 DKVPHQTKAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYG 54
>gi|206576946|ref|YP_002239233.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella pneumoniae 342]
gi|229486343|sp|B5XSN3|MNMA_KLEP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|206566004|gb|ACI07780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella pneumoniae 342]
Length = 368
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS L + +VE L
Sbjct: 1 MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGL 35
>gi|205829099|sp|Q5GTC8|MNMA_WOLTR RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 371
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG 43
D + A++ SGG DSS +V ++ YG
Sbjct: 13 DKVPHQTKAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYG 54
>gi|134098260|ref|YP_001103921.1| asparagine synthase (glutamine-hydrolyzing) [Saccharopolyspora
erythraea NRRL 2338]
gi|133910883|emb|CAM00996.1| asparagine synthase (glutamine-hydrolyzing) [Saccharopolyspora
erythraea NRRL 2338]
Length = 621
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 1 MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
M D + K A + SGG DS+ + A + + T + + ++ E++
Sbjct: 236 MRDSVAKHMRADVTVGAFLSGGIDSTAIAALAKEHNPNLITFTTGFERQGYSEVDVAAES 295
Query: 57 RKKI 60
I
Sbjct: 296 AAAI 299
>gi|58584415|ref|YP_197988.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Wolbachia endosymbiont strain TRS of Brugia malayi]
gi|58418731|gb|AAW70746.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contain the PP-loop ATPase domain
[Wolbachia endosymbiont strain TRS of Brugia malayi]
Length = 385
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG 43
D + A++ SGG DSS +V ++ YG
Sbjct: 27 DKVPHQTKAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYG 68
>gi|11497869|ref|NP_069091.1| GMP synthase subunit B [Archaeoglobus fulgidus DSM 4304]
gi|13626770|sp|O29986|GUAAB_ARCFU RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|2650384|gb|AAB90977.1| GMP synthase (guaA-1) [Archaeoglobus fulgidus DSM 4304]
Length = 303
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 58/191 (30%), Gaps = 33/191 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A++ SGG DSS C A DR+ + D G R +KI E+
Sbjct: 19 KDGKAIIALSGGVDSSVCTVLAHKALGDRLIPVFVDTG-------LMREGEPEKIKEIFG 71
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + + I + +F+ +A
Sbjct: 72 NMGLVFIDAK---EEFFKALKGVTDPEEKRKVIGE-------------LFVRIFERVAEE 115
Query: 126 LGITNIVIGVCETDYSGYPDC--RHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWK 182
++ G + YPD I++ V PL L K E +
Sbjct: 116 HNAEYLIQG------TIYPDIIESQGGIKSHHNVGGFPTSYKFKDVIEPLRELYKDEVRE 169
Query: 183 LAQDIGGQDLV 193
+A+ +G +
Sbjct: 170 VARYLGLPKEI 180
>gi|329115339|ref|ZP_08244093.1| Argininosuccinate synthase [Acetobacter pomorum DM001]
gi|326695318|gb|EGE47005.1| Argininosuccinate synthase [Acetobacter pomorum DM001]
Length = 413
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 22/135 (16%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W + V T + D GQ ++E + + E+
Sbjct: 8 KDVKKVVLAYSGGLDTSVILRWLQKTYGCEVVTFTADLGQGEELEPARKKAEMFGVKEIF 67
Query: 65 -PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---A 120
+++ +D + P+ + ++ + A
Sbjct: 68 VEDLRETFVKDFVFPMFRANTLYEGQYLLGTSIARP-----------------LIAQRQI 110
Query: 121 TLAYRLGITNIVIGV 135
+A +G + G
Sbjct: 111 EIAEAVGADAVAHGA 125
>gi|289550612|ref|YP_003471516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus lugdunensis HKU09-01]
gi|315658107|ref|ZP_07910979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus lugdunensis M23590]
gi|289180144|gb|ADC87389.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus lugdunensis HKU09-01]
gi|315496436|gb|EFU84759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus lugdunensis M23590]
Length = 370
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGI 35
>gi|297544017|ref|YP_003676319.1| PP-loop domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841792|gb|ADH60308.1| PP-loop domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 300
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
N + +K L++ SGG+DS + V + + G
Sbjct: 41 NRMFEKGEKVLVVVSGGKDSMALWDILVKEGYNVVAMYINLG 82
>gi|189463744|ref|ZP_03012529.1| hypothetical protein BACINT_00077 [Bacteroides intestinalis DSM
17393]
gi|189438694|gb|EDV07679.1| hypothetical protein BACINT_00077 [Bacteroides intestinalis DSM
17393]
Length = 359
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 4 IIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLS 39
+ + L+ SGG DS+ TCL ++ + L+
Sbjct: 1 MNRPEKRVLVGMSGGIDSTATCL-MLKEQGYEIVGLT 36
>gi|149175320|ref|ZP_01853942.1| GMP synthase [Planctomyces maris DSM 8797]
gi|148845929|gb|EDL60270.1| GMP synthase [Planctomyces maris DSM 8797]
Length = 532
Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 56/197 (28%), Gaps = 35/197 (17%)
Query: 9 PSALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ SGG DSS + ++ + D G K E V + E
Sbjct: 235 KQVICGLSGGVDSSVVAALLYRAIGSQLSCIFVDNGLLRKGE---ADEVEHRFGEHFK-- 289
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVA---------MKIQDNNLPNTFVPGRNIIFLVF 118
+ H++ L + +T +++ + N FL
Sbjct: 290 ----TDLHVVDARDLFLSELAGVTDPQEKRKIIGRLFIEVFQKEAAS----IENAKFLAQ 341
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
I G PD TI++ L + + PL L K
Sbjct: 342 GTLY-----PDVIESGAN-------PDGPAATIKSHHNVGGLPEKLGFELIEPLRELFKD 389
Query: 179 ETWKLAQDIGGQDLVNL 195
E ++ ++G D +
Sbjct: 390 EVRQMGHELGLPDELIY 406
>gi|289741327|gb|ADD19411.1| GMP synthase [Glossina morsitans morsitans]
Length = 683
Score = 39.1 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
LLL SGG DS+ C + ++ + D G +RK E +
Sbjct: 228 KNKVLLLVSGGVDSTVCAALLRHALHPSQIIAVHVDNG-----------FMRKDESEKVE 276
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTK 92
K +G D I+ + + ++ K
Sbjct: 277 KSLRDIGIDLIVRKEVYTFLKGTTQIK 303
>gi|271966570|ref|YP_003340766.1| asparagine synthase [Streptosporangium roseum DSM 43021]
gi|270509745|gb|ACZ88023.1| Asparagine synthase (glutamine-hydrolyzing) [Streptosporangium
roseum DSM 43021]
Length = 597
Score = 39.1 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
+ + A A L SGG DSST + A R +R+ T S DY Q + +
Sbjct: 243 VGEQTASAGRAGSLMSGGLDSSTLAALLAGRREERLATFSVDY-QGYEENFRPHIVRPAP 301
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSS 89
+ + LG DH + GD++
Sbjct: 302 DSPYVREMTAHLGSDHTDVVLTTGDLTAPD 331
>gi|167039805|ref|YP_001662790.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X514]
gi|300915540|ref|ZP_07132850.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307724869|ref|YP_003904620.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X513]
gi|166854045|gb|ABY92454.1| PP-loop domain protein [Thermoanaerobacter sp. X514]
gi|300888404|gb|EFK83556.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307581930|gb|ADN55329.1| PP-loop domain protein [Thermoanaerobacter sp. X513]
Length = 300
Score = 39.1 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
N + KK L++ SGG+DS + V + + G
Sbjct: 41 NKMFKKDDRVLVVVSGGKDSMALWDVLVKEGYNVVAMYINLG 82
>gi|110005181|emb|CAK99508.1| probable trna
5-methylaminomethyl-2-thiouridylate-methyltransferase
protein [Spiroplasma citri]
Length = 377
Score = 39.1 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS L VE L
Sbjct: 2 KKVVVGLSGGVDSSVSLYLLQQAGYDVEGL 31
>gi|94311104|ref|YP_584314.1| hypothetical protein Rmet_2166 [Cupriavidus metallidurans CH34]
gi|93354956|gb|ABF09045.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 419
Score = 39.1 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 34/240 (14%), Positives = 69/240 (28%), Gaps = 52/240 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLS-FDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+ L SGG DS A+ + R +S Y E + + +W
Sbjct: 140 VALLSGGLDSLIGGIDAVAKMRRPIFVSQLAY---EDSERQRQYAAALGGAAWHQQWSHR 196
Query: 71 LG---------EDHILPLAILGDISHS--SLTKNVAMKIQDNNLPNT---FVPGRNIIFL 116
+ + L ++ S + T + + +N + +PGR + L
Sbjct: 197 IDPAAPREPSTRARSMGFYALAVLATSLLTTTGPAEILVPENGFISVNPPLLPGR-MASL 255
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
T ++ ++ + + + P +
Sbjct: 256 STRTTH-------------------------PLFMKQLQGLLK-AVGIPANLSMPYRFKT 289
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
K E D Q L+ +S +C R C C C +R+ ++ + +
Sbjct: 290 KGEMMMECLD---QKLLAHFASDSTSC----GRYRTYNRTHCGRCVPCMVRRAAFLRWGQ 342
>gi|291562415|emb|CBL41231.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[butyrate-producing bacterium SS3/4]
Length = 358
Score = 39.1 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKKKVVVGMSGGVDSSVAACLLKEQGYDVIGVT 33
>gi|240127089|ref|ZP_04739750.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae SK-93-1035]
gi|268685447|ref|ZP_06152309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae SK-93-1035]
gi|268625731|gb|EEZ58131.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae SK-93-1035]
Length = 383
Score = 39.1 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 17 MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWENDDNDEYCSIKQD 72
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 73 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 129
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 130 LDYAVG----QGADTIATG 144
>gi|194097878|ref|YP_002000923.1| tRNA-specific 2-thiouridylase MnmA [Neisseria gonorrhoeae
NCCP11945]
gi|239998356|ref|ZP_04718280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae 35/02]
gi|240016919|ref|ZP_04723459.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae FA6140]
gi|240079741|ref|ZP_04724284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae FA19]
gi|240116431|ref|ZP_04730493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID18]
gi|240122374|ref|ZP_04735330.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID332]
gi|240125108|ref|ZP_04737994.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae SK-92-679]
gi|254494442|ref|ZP_05107613.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae 1291]
gi|260441652|ref|ZP_05795468.1| tRNA-specific 2-thiouridylase MnmA [Neisseria gonorrhoeae DGI2]
gi|268594219|ref|ZP_06128386.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae 35/02]
gi|268595888|ref|ZP_06130055.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae FA19]
gi|268602098|ref|ZP_06136265.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID18]
gi|268680964|ref|ZP_06147826.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID332]
gi|268683706|ref|ZP_06150568.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae SK-92-679]
gi|291045029|ref|ZP_06570737.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae DGI2]
gi|193933168|gb|ACF28992.1| Probable tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae NCCP11945]
gi|226513482|gb|EEH62827.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae 1291]
gi|268547608|gb|EEZ43026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae 35/02]
gi|268549676|gb|EEZ44695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae FA19]
gi|268586229|gb|EEZ50905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID18]
gi|268621248|gb|EEZ53648.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID332]
gi|268623990|gb|EEZ56390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae SK-92-679]
gi|291011032|gb|EFE03029.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae DGI2]
gi|317163647|gb|ADV07188.1| tRNA-specific 2-thiouridylase MnmA [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 383
Score = 39.1 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 17 MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWENDDNDEYCSIKQD 72
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 73 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 129
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 130 LDYAVG----QGADTIATG 144
>gi|332982459|ref|YP_004463900.1| argininosuccinate synthase [Mahella australiensis 50-1 BON]
gi|332700137|gb|AEE97078.1| argininosuccinate synthase [Mahella australiensis 50-1 BON]
Length = 403
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 22/134 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-M 64
+L +SGG D+S + W + + V ++ D GQ ++E ++ ++ +
Sbjct: 2 SKEKVVLAYSGGLDTSIIIPWLKENYDYEVIAVAVDVGQGEELEPLREKAIKTGASKIYI 61
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---AT 121
K ED I P G I +M + A
Sbjct: 62 EDLKKEFVEDFIFPTLKAGAIYEGKYLLGTSMARP-----------------LIAKRLVE 104
Query: 122 LAYRLGITNIVIGV 135
+A G I G
Sbjct: 105 IAEAEGAQAIAHGA 118
>gi|332184397|gb|AEE26651.1| NAD synthetase / Glutamine amidotransferase chain of NAD synthetase
[Francisella cf. novicida 3523]
Length = 249
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 45/185 (24%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ SGG DS+ S A+ L L + + I + + +
Sbjct: 33 VIGISGGIDSAVAASLAVKTGLPTTALI----------LPSKNNQHQDIQDALELVEKLN 82
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-------LVFAATLAY 124
E HI+ + + +S + + R ++ L AY
Sbjct: 83 IEHHIVTIQPAYENFLASTQEFINTDN-----------NRQLVIKGNAQARLRMMYLYAY 131
Query: 125 RLGITNIVIGV-CETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
IVIG + Y GY + + A ++ PL+ LKK + ++
Sbjct: 132 AQQYNRIVIGTDNACEWYMGY------FTKFGDGAADI---------FPLINLKKSQVFE 176
Query: 183 LAQDI 187
L + +
Sbjct: 177 LGKYL 181
>gi|152992636|ref|YP_001358357.1| tRNA-specific 2-thiouridylase MnmA [Sulfurovum sp. NBC37-1]
gi|205828996|sp|A6Q941|MNMA_SULNB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|151424497|dbj|BAF72000.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Sulfurovum sp. NBC37-1]
Length = 340
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
L+ SGG DS+ VE +
Sbjct: 5 KVLVGLSGGVDSTVTAVLLQKEGYEVEGV 33
>gi|152979876|ref|YP_001352537.1| argininosuccinate synthase [Janthinobacterium sp. Marseille]
gi|226729193|sp|A6SW90|ASSY_JANMA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|151279953|gb|ABR88363.1| argininosuccinate synthase [Janthinobacterium sp. Marseille]
Length = 447
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 1 MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
M++I++ + FSGG D+S L W + + + GQ ++ +
Sbjct: 1 MSNILQSVPVNQKVGIAFSGGLDTSAALHWMRQKGAIPYAYTANLGQPDETDYNAIPEKA 60
Query: 58 KKIVELMPKWKD 69
K + + D
Sbjct: 61 KAYGAELARLID 72
>gi|134094110|ref|YP_001099185.1| argininosuccinate synthase [Herminiimonas arsenicoxydans]
gi|226729187|sp|A4G3H1|ASSY_HERAR RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|133738013|emb|CAL61058.1| argininosuccinate synthetase (Citrulline--aspartate ligase)
[Herminiimonas arsenicoxydans]
Length = 445
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 1 MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
M++I++ + FSGG D+S L W + + + GQ ++ +
Sbjct: 1 MSNILQSVPVNQKVGIAFSGGLDTSAALHWMRQKGAIPYAYTANLGQPDETDYNAIPEKA 60
Query: 58 KKIVELMPKWKD 69
K + + D
Sbjct: 61 KAYGAELARLID 72
>gi|32266455|ref|NP_860487.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter hepaticus ATCC
51449]
gi|81657428|sp|Q7U320|MNMA_HELHP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|32262506|gb|AAP77553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter hepaticus ATCC 51449]
Length = 345
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 41/193 (21%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LL SGG DSS C + V + Y + + K ++ + +
Sbjct: 5 LLMSGGVDSSYCAHLLSSQGYEVIGI---YLKLHDK---------NKKHDIYIANCEQVA 52
Query: 73 EDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
+ + L + S+ ++ PN P N + A LG
Sbjct: 53 AHLHIDFQVLDLREEFKKSVYDTFVSSYKEGKTPN---PCAICNPLMKFGLGLQKALELG 109
Query: 128 ITNIVIGVCET--DYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----------PLMW 174
I G + +G I+ I A++ + ++ PL
Sbjct: 110 CDYIATGHYAQIKEVNG--------IKRIAKAVDESKDQSYFLYALPQEAIDRIIFPLGA 161
Query: 175 LKKYETWKLAQDI 187
L K + K A ++
Sbjct: 162 LLKEDIKKTALEL 174
>gi|325832043|ref|ZP_08165140.1| TIGR00268 family protein [Eggerthella sp. HGA1]
gi|325486364|gb|EGC88816.1| TIGR00268 family protein [Eggerthella sp. HGA1]
Length = 210
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 63/184 (34%), Gaps = 38/184 (20%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ P + FSGG DSS L+ AL V+ YG R + + K++ +
Sbjct: 21 RTPRLAVAFSGGCDSSFLLAAALRAGCDVKA----YGVRTAFQPAFEIDDAKRLAAELGA 76
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + G+I + + K TF IF A +A
Sbjct: 77 DFELVDA----DVLAQGEICANGPDRCYRCK--------TF------IFSTILARMAED- 117
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKLA 184
G + G TD P R + LG V +PL + K + +
Sbjct: 118 GFEVLADGTNVTDD---PANRPGF----QALAELG------VVSPLRRAGMTKDDVRAAS 164
Query: 185 QDIG 188
+++G
Sbjct: 165 RELG 168
>gi|284045062|ref|YP_003395402.1| argininosuccinate synthase [Conexibacter woesei DSM 14684]
gi|283949283|gb|ADB52027.1| argininosuccinate synthase [Conexibacter woesei DSM 14684]
Length = 431
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
LLL+SGG D+S L W D + V L+ + GQ
Sbjct: 30 RRVLLLYSGGLDTSVMLKWIQDEYRAEVVCLTVNLGQ 66
>gi|240117158|ref|ZP_04731220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID1]
gi|268602848|ref|ZP_06137015.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID1]
gi|268586979|gb|EEZ51655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID1]
Length = 383
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 17 MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWENDDNDEYCSIKQD 72
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 73 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 129
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 130 LDYAVG----QGADTIATG 144
>gi|229493357|ref|ZP_04387146.1| NAD+ synthetase [Rhodococcus erythropolis SK121]
gi|229319673|gb|EEN85505.1| NAD+ synthetase [Rhodococcus erythropolis SK121]
Length = 274
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 61/201 (30%), Gaps = 57/201 (28%)
Query: 16 SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH 75
SGGQDS+ + A QR EL + + +P + D
Sbjct: 48 SGGQDSTLAGALA---------------QRAVTELREEGHEAEFVAVRLPYGAQADESDA 92
Query: 76 ILPLAILG---------DISHSSLTKNVAMKIQDNNLPNTFVPG------RNIIFLVFAA 120
+ L + + + + + + L + FV G R
Sbjct: 93 QIALGFIKPDRSLTVNVKPGADATAREASEALGNGELRD-FVRGNIKARER------MVI 145
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + +VIG TD++ AI + V + TPL L K +
Sbjct: 146 QYAIAGQLGYLVIG---TDHAA---------EAITGFFTKFGDGGVDI-TPLTGLSKRQG 192
Query: 181 WKLAQDIGGQDLVNLILEESH 201
L Q++G E +
Sbjct: 193 AALLQELGAP-------ESTW 206
>gi|254169437|ref|ZP_04876262.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
gi|289596768|ref|YP_003483464.1| ATP binding protein [Aciduliprofundum boonei T469]
gi|197621607|gb|EDY34197.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
gi|289534555|gb|ADD08902.1| ATP binding protein [Aciduliprofundum boonei T469]
Length = 221
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY 42
A+ LFSGG+DS+ + A+ + +E L Y
Sbjct: 2 RAIALFSGGKDSTYSIYLAMQQGFEIEKLVTIY 34
>gi|326390081|ref|ZP_08211643.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325993946|gb|EGD52376.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 300
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
N + KK L++ SGG+DS V + + G
Sbjct: 41 NKMFKKDDRVLVVVSGGKDSMALWDVLAKEGYNVVAMYINLG 82
>gi|313676372|ref|YP_004054368.1| asparagine synthase (glutamine-hydrolyzing) [Marivirga tractuosa
DSM 4126]
gi|312943070|gb|ADR22260.1| asparagine synthase (glutamine-hydrolyzing) [Marivirga tractuosa
DSM 4126]
Length = 631
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS + A + + + T S Y G E E V K I + SL +
Sbjct: 264 LSGGVDSSIISAIAAKKVESLHTFSIGYKGHSFFDETEYANAVAKHIGSKHQVFSLSLDD 323
>gi|307264980|ref|ZP_07546541.1| PP-loop domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919965|gb|EFN50178.1| PP-loop domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 300
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
N + KK L++ SGG+DS V + + G
Sbjct: 41 NKMFKKDDRVLVVVSGGKDSMALWDVLAKEGYNVVAMYINLG 82
>gi|330821883|ref|YP_004350745.1| asparagine synthase [Burkholderia gladioli BSR3]
gi|327373878|gb|AEA65233.1| asparagine synthase [Burkholderia gladioli BSR3]
Length = 635
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 40/144 (27%)
Query: 13 LLFSGGQDSSTCLSWALD-RFDRVETLSFD------YGQRNKVELECRLCVRKKIVELMP 65
+ SGG DSS L A ++ Y +R E+ R
Sbjct: 261 VSLSGGLDSSAMLGIATTLTGKPLQAFHLSFEGADGYDERRYAEIAARHNGA-------- 312
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA----AT 121
E H+L S++++ + L +T VP N A
Sbjct: 313 -------ELHVL-----------SVSQDDLADHFEETLRHTEVPFSNAH--SIAKYMLCK 352
Query: 122 LAYRLGITNIVIGVCETD-YSGYP 144
R G+ ++ G + ++GYP
Sbjct: 353 FIQRNGMRAVLTGEGADEVFAGYP 376
>gi|308271347|emb|CBX27955.1| Argininosuccinate synthase [uncultured Desulfobacterium sp.]
Length = 403
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K +L +SGG D+S L W ++ + V T S D GQ + EL+ KK
Sbjct: 1 MSDKIKKIVLAYSGGLDTSVILKWLIETYQCEVITFSADLGQ--EEELDYIDEKAKKTGA 58
Query: 63 ---LMPKWKDSLGEDHILP 78
+ K+ +D++ P
Sbjct: 59 AKVYIDDLKEVFAKDYVFP 77
>gi|251793304|ref|YP_003008032.1| tRNA-specific 2-thiouridylase MnmA [Aggregatibacter aphrophilus
NJ8700]
gi|247534699|gb|ACS97945.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Aggregatibacter aphrophilus NJ8700]
Length = 384
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 45/142 (31%), Gaps = 34/142 (23%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELECRLCVRK 58
+ SGG DSS + +VE L DY +LE V
Sbjct: 24 TKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNWEEDDDTDYC-TAAADLEDAQAVCD 82
Query: 59 KI------VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
K+ + ++ D++ E H L G + + N +K +
Sbjct: 83 KLGIKLHKINFAAEYWDNVFE-HFLNEYKAGRTPNPDILCNKEIKFKA------------ 129
Query: 113 IIFLVFAATLAYRLGITNIVIG 134
FL +A A LG I G
Sbjct: 130 --FLEYA---AEDLGANYIATG 146
>gi|222099726|ref|YP_002534294.1| GMP synthase [Thermotoga neapolitana DSM 4359]
gi|221572116|gb|ACM22928.1| GMP synthase [Thermotoga neapolitana DSM 4359]
Length = 503
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 15/107 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG--QRNKVELECR----------- 53
A+L SGG DSS + + D+G ++N+ E R
Sbjct: 207 NKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKEHFDMNLV 266
Query: 54 -LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
+ RK+ +E + D + I+ + + +V +Q
Sbjct: 267 VVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKHDVEFLVQ 313
>gi|148270235|ref|YP_001244695.1| GMP synthase [Thermotoga petrophila RKU-1]
gi|226739760|sp|A5ILP6|GUAA_THEP1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|147735779|gb|ABQ47119.1| GMP synthase (glutamine-hydrolyzing) [Thermotoga petrophila RKU-1]
Length = 501
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 15/107 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG--QRNKVELECR----------- 53
A+L SGG DSS + + D+G ++N+ E R
Sbjct: 205 NKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKEHFDMNLV 264
Query: 54 -LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
+ RK+ +E + D + I+ + + +V +Q
Sbjct: 265 VVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKHDVEFLVQ 311
>gi|218768524|ref|YP_002343036.1| tRNA-specific 2-thiouridylase MnmA [Neisseria meningitidis Z2491]
gi|11277501|pir||H81798 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC
2.1.1.61) NMA1744 [imported] - Neisseria meningitidis
(strain Z2491 serogroup A)
gi|121052532|emb|CAM08872.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis Z2491]
Length = 383
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 17 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 72
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 73 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 129
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 130 LDYAVG----QGADTIATG 144
>gi|15644564|ref|NP_229617.1| GMP synthase [Thermotoga maritima MSB8]
gi|170288796|ref|YP_001739034.1| GMP synthase, large subunit [Thermotoga sp. RQ2]
gi|281412430|ref|YP_003346509.1| GMP synthase, large subunit [Thermotoga naphthophila RKU-10]
gi|13627216|sp|Q9X2E0|GUAA_THEMA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|226739761|sp|B1LAK3|GUAA_THESQ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|4982402|gb|AAD36883.1|AE001819_6 GMP synthase [Thermotoga maritima MSB8]
gi|170176299|gb|ACB09351.1| GMP synthase, large subunit [Thermotoga sp. RQ2]
gi|281373533|gb|ADA67095.1| GMP synthase, large subunit [Thermotoga naphthophila RKU-10]
Length = 501
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 15/107 (14%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG--QRNKVELECR----------- 53
A+L SGG DSS + + D+G ++N+ E R
Sbjct: 205 NKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKEHFDMNLV 264
Query: 54 -LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
+ RK+ +E + D + I+ + + +V +Q
Sbjct: 265 VVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKHDVEFLVQ 311
>gi|15897585|ref|NP_342190.1| hypothetical protein SSO0678 [Sulfolobus solfataricus P2]
gi|284174908|ref|ZP_06388877.1| hypothetical protein Ssol98_09671 [Sulfolobus solfataricus 98/2]
gi|6015798|emb|CAB57625.1| hypothetical protein [Sulfolobus solfataricus P2]
gi|13813846|gb|AAK40980.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602350|gb|ACX91953.1| ATP binding protein [Sulfolobus solfataricus 98/2]
Length = 222
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+L+SGG+DS+ L WA+ + V L
Sbjct: 5 VLYSGGKDSTYALHWAVFKGFEVVCL 30
>gi|14195277|sp|Q9JTJ9|MNMA_NEIMA RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 367
Score = 39.1 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 114 LDYAVG----QGADTIATG 128
>gi|303247112|ref|ZP_07333387.1| argininosuccinate synthase [Desulfovibrio fructosovorans JJ]
gi|302491538|gb|EFL51423.1| argininosuccinate synthase [Desulfovibrio fructosovorans JJ]
Length = 397
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVE 62
+ +L +SGG D+S L W +D V T++ D GQ +++ LE +
Sbjct: 1 MSAIKKVVLAYSGGLDTSVILKWIKKTYDCEVITVTCDLGQEEELDGLEEKALRTGASKA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDI 85
+ ++ +D I P+ G +
Sbjct: 61 YIDDLREEFAKDFIFPMLRAGAV 83
>gi|299134181|ref|ZP_07027374.1| tRNA(Ile)-lysidine synthetase [Afipia sp. 1NLS2]
gi|298590928|gb|EFI51130.1| tRNA(Ile)-lysidine synthetase [Afipia sp. 1NLS2]
Length = 347
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 16/78 (20%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWA------LDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
K AL+L SGG DS L A L + ++ D+G R E R R
Sbjct: 24 KRIPALVLAVSGGPDSVALLWLAARWRKSLKNGPDLLAVTVDHGLRAAAAHEARNVKR-- 81
Query: 60 IVELMPKWKDSLGEDHIL 77
SLG H +
Sbjct: 82 -------LASSLGITHRI 92
>gi|255020986|ref|ZP_05293041.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus caldus ATCC
51756]
gi|254969591|gb|EET27098.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus caldus ATCC
51756]
Length = 465
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+L FSGG+DS T L WAL D+G + C +P
Sbjct: 22 TRPVILAFSGGRDS-TALFWALHAIGQDFVAAHVDHGWHPRSAEWAARCAEVAASAGVPF 80
Query: 67 WKDSLGED 74
LG+D
Sbjct: 81 VLRQLGKD 88
>gi|225873266|ref|YP_002754725.1| (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidobacterium capsulatum ATCC 51196]
gi|259495822|sp|C1F792|MNMA_ACIC5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|225792803|gb|ACO32893.1| (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidobacterium capsulatum ATCC 51196]
Length = 374
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQR 45
+ + + SGG DSST + + + L+ + QR
Sbjct: 1 MSFNNTVAVAMSGGVDSSTVAAMLREEGYDLIGLTLQLWNQR 42
>gi|218884310|ref|YP_002428692.1| putative ATP binding protein [Desulfurococcus kamchatkensis
1221n]
gi|218765926|gb|ACL11325.1| putative ATP binding protein [Desulfurococcus kamchatkensis
1221n]
Length = 230
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
A +L+SGG+DS+ L A++ +V LS
Sbjct: 2 KATVLYSGGKDSTYALHKAVEAGHQVAVLS 31
>gi|108798144|ref|YP_638341.1| GMP synthase [Mycobacterium sp. MCS]
gi|119867240|ref|YP_937192.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Mycobacterium sp. KMS]
gi|126433803|ref|YP_001069494.1| GMP synthase [Mycobacterium sp. JLS]
gi|108768563|gb|ABG07285.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. MCS]
gi|119693329|gb|ABL90402.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. KMS]
gi|126233603|gb|ABN97003.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. JLS]
Length = 519
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 20/113 (17%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE---------CRL 54
A+ SGG DS+ + DR+ + D+ G+R +V+ + +
Sbjct: 219 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRSGERAQVQRDFVAATGANLVTV 278
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
V + ++ + + G+ I+ G S+ V + D+ P F
Sbjct: 279 DVADRFLQELSGVTNPEGKRKII-----GREFISAFDDAVVDIVGDSGAPVEF 326
>gi|59801573|ref|YP_208285.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae FA 1090]
gi|293399659|ref|ZP_06643811.1| tRNA methyl transferase [Neisseria gonorrhoeae F62]
gi|59718468|gb|AAW89873.1| putative tRNA methyltransferase [Neisseria gonorrhoeae FA 1090]
gi|291609910|gb|EFF39033.1| tRNA methyl transferase [Neisseria gonorrhoeae F62]
Length = 383
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 17 MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWENDDNDEYCSIKQD 72
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 73 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 129
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 130 LDYAVG----QGADTIATG 144
>gi|16330399|ref|NP_441127.1| tRNA-specific 2-thiouridylase MnmA [Synechocystis sp. PCC 6803]
gi|3122978|sp|P73755|MNMA_SYNY3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|1652889|dbj|BAA17807.1| sll0844 [Synechocystis sp. PCC 6803]
Length = 358
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + + V ++
Sbjct: 1 MTQKVVVGLSGGVDSSVAAALLHRQGYAVVGVT 33
>gi|325123074|gb|ADY82597.1| conserved hypothetical protein [Acinetobacter calcoaceticus
PHEA-2]
Length = 228
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 1 MNDIIKKA---PSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELEC 52
M + K +++ FSGG+DSS L A+ + + + + GQR + + L+
Sbjct: 1 MQEQWKTNANHKRSIVSFSGGKDSSLALYHAMQTGEVIGLIVMLEEQGQRSRSHAMPLDI 60
Query: 53 RLCVRKKI 60
K I
Sbjct: 61 IQAQAKAI 68
>gi|307545317|ref|YP_003897796.1| thiamine biosynthesis protein ThiI [Halomonas elongata DSM 2581]
gi|307217341|emb|CBV42611.1| thiamine biosynthesis protein ThiI [Halomonas elongata DSM 2581]
Length = 492
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 58/185 (31%), Gaps = 27/185 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R + + F+ G +++
Sbjct: 176 PMGIQGQVLSLISGGFDSPVAAWRMMRRGVKSHFVFFNLGG------PAHEAGVREVTHH 229
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + H + + G I + I D + V R + + A+ +A
Sbjct: 230 LWQRYSASHNVHFISVPFEGVIG------EILKTIPDGLMG--VVLKR--MMVRAASRIA 279
Query: 124 YRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
R GI +V G S + + + S + + PL+ K
Sbjct: 280 ERAGIPALVTGDAIAQVSS----------QTLSNLALIDDASPMPILRPLLTEDKQAIID 329
Query: 183 LAQDI 187
A+ I
Sbjct: 330 QARQI 334
>gi|293609848|ref|ZP_06692150.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828300|gb|EFF86663.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 228
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 1 MNDIIKKA---PSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELEC 52
M + K +++ FSGG+DSS L A+ + + + + GQR + + L+
Sbjct: 1 MQEQWKTNANHKRSIVSFSGGKDSSLALYHAMQTGEVIGLIVMLEEQGQRSRSHAMPLDI 60
Query: 53 RLCVRKKI 60
K I
Sbjct: 61 IQAQAKAI 68
>gi|262402513|ref|ZP_06079074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. RC586]
gi|262351295|gb|EEZ00428.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. RC586]
Length = 371
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 3 VEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 40
>gi|311740584|ref|ZP_07714411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium pseudogenitalium ATCC 33035]
gi|311304104|gb|EFQ80180.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium pseudogenitalium ATCC 33035]
Length = 365
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ L+ SGG DSS + A++ V +
Sbjct: 1 MGSTMRVLVAMSGGVDSSVAAARAVEAGHEVIGVH 35
>gi|154174151|ref|YP_001409218.1| thiamine biosynthesis protein:ExsB [Campylobacter curvus 525.92]
gi|112803489|gb|EAU00833.1| thiamine biosynthesis protein:ExsB [Campylobacter curvus 525.92]
Length = 329
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + D+ V L D G
Sbjct: 2 KALALFSGGLDSMLAMKIISDQGIEVVALYMDTG 35
>gi|39995758|ref|NP_951709.1| NAD synthetase [Geobacter sulfurreducens PCA]
gi|39982522|gb|AAR33982.1| NAD+ synthetase [Geobacter sulfurreducens PCA]
gi|298504768|gb|ADI83491.1| NAD+ synthetase [Geobacter sulfurreducens KN400]
Length = 273
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 6/72 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ A + D V + Y R + + E +
Sbjct: 29 RKAVLGLSGGIDSALVAFLAAEALGPDNVHAIIMPY--RTSNPESEAH--ARLVAEQLGI 84
Query: 67 WKDSLGEDHILP 78
+ + ++
Sbjct: 85 NHEVIEITPMVD 96
>gi|85711187|ref|ZP_01042247.1| thiamine biosynthesis protein ThiI [Idiomarina baltica OS145]
gi|85695100|gb|EAQ33038.1| thiamine biosynthesis protein ThiI [Idiomarina baltica OS145]
Length = 485
Score = 39.1 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 58/197 (29%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I + + L SGG DSS + R R F+ G + K+I
Sbjct: 175 PIPTQETVVSLMSGGFDSSVASFDFIRRGARTHFCFFNLGG------DAHEVAVKQICHY 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + + +++ + + + V R L A +A
Sbjct: 229 LWDRYSKSHPIKFISVDFAP------IVEDILTHVDNGAMG--VVLKRQ--MLRAATRVA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
L +V G S + + + + V PL+ K
Sbjct: 279 GFLKAQALVTGEAIGQVSS---------QTLANLQVIDKATDTLVLRPLITADKQTIVDQ 329
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + L I E
Sbjct: 330 AKRIGTEALAKTIPEYC 346
>gi|331006070|ref|ZP_08329406.1| Argininosuccinate synthase [gamma proteobacterium IMCC1989]
gi|330420107|gb|EGG94437.1| Argininosuccinate synthase [gamma proteobacterium IMCC1989]
Length = 406
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W + + V T + D GQ +VE + E+
Sbjct: 1 MSSINKVVLAYSGGLDTSVIVKWLQETYQCEVVTFTADLGQGEEVEPARAKAEALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ I ++
Sbjct: 61 YIDDLREEFVRDYVFPMFRANAIYEGEYLLGTSIA 95
>gi|329731094|gb|EGG67466.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus 21193]
Length = 431
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|330815569|ref|YP_004359274.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia gladioli BSR3]
gi|327367962|gb|AEA59318.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia gladioli BSR3]
Length = 390
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS ++ V L
Sbjct: 2 KKQRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|302332222|gb|ADL22415.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 431
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|284023518|ref|ZP_06377916.1| hypothetical protein Saura13_02954 [Staphylococcus aureus subsp.
aureus 132]
Length = 431
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|316931625|ref|YP_004106607.1| argininosuccinate synthase [Rhodopseudomonas palustris DX-1]
gi|315599339|gb|ADU41874.1| argininosuccinate synthase [Rhodopseudomonas palustris DX-1]
Length = 445
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
M I+K K + + FSGG D+S L W + +V + + GQ ++ + + +
Sbjct: 1 MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANLGQPDEADYDA---IP 57
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLT 91
+K +E + + L + I +
Sbjct: 58 RKAMEFGAEKARLVDCRTQLVHEGIAAIQAGAFH 91
>gi|283469801|emb|CAQ49012.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Staphylococcus
aureus subsp. aureus ST398]
Length = 431
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|262052536|ref|ZP_06024733.1| hypothetical protein SA930_1957 [Staphylococcus aureus 930918-3]
gi|282925584|ref|ZP_06333237.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus A9765]
gi|259159583|gb|EEW44630.1| hypothetical protein SA930_1957 [Staphylococcus aureus 930918-3]
gi|282592488|gb|EFB97500.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus A9765]
Length = 431
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|255324545|ref|ZP_05365662.1| tRNA-methyltransferase [Corynebacterium tuberculostearicum SK141]
gi|255298451|gb|EET77751.1| tRNA-methyltransferase [Corynebacterium tuberculostearicum SK141]
Length = 365
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ L+ SGG DSS + A++ V +
Sbjct: 1 MGSTMRVLVAMSGGVDSSVAAARAVEAGHEVIGVH 35
>gi|253730977|ref|ZP_04865142.1| cell cycle control ATP-binding protein MesJ [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253725289|gb|EES94018.1| cell cycle control ATP-binding protein MesJ [Staphylococcus
aureus subsp. aureus USA300_TCH959]
Length = 431
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|289208652|ref|YP_003460718.1| tRNA(Ile)-lysidine synthetase [Thioalkalivibrio sp. K90mix]
gi|288944283|gb|ADC71982.1| tRNA(Ile)-lysidine synthetase [Thioalkalivibrio sp. K90mix]
Length = 418
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 13 LLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ FSGG+DSS L + A R +E ++G R E + CVR + + L
Sbjct: 27 VAFSGGRDSSVLLHALAQLRPQGLEAWHVNHGLRPDAEAQAAFCVR-----VAEALEVPL 81
Query: 72 GEDHILPLAILGD 84
+++ L +
Sbjct: 82 TVRNVIVLDDASE 94
>gi|149908394|ref|ZP_01897057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Moritella sp. PE36]
gi|149808557|gb|EDM68492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Moritella sp. PE36]
Length = 379
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 10 TKALNSTKKVIVGMSGGVDSSVSAYLLQQQGYQVEGL 46
>gi|121607299|ref|YP_995106.1| tRNA-specific 2-thiouridylase MnmA [Verminephrobacter eiseniae
EF01-2]
gi|166991125|sp|A1WEN1|MNMA_VEREI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|121551939|gb|ABM56088.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Verminephrobacter eiseniae EF01-2]
Length = 370
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 11/35 (31%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + V +
Sbjct: 2 TASPKQRVVVGLSGGVDSAVTAYLLRQQGHEVVGI 36
>gi|57651385|ref|YP_185441.1| hypothetical protein SACOL0553 [Staphylococcus aureus subsp.
aureus COL]
gi|87161906|ref|YP_493196.1| hypothetical protein SAUSA300_0487 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194269|ref|YP_499061.1| hypothetical protein SAOUHSC_00484 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151220683|ref|YP_001331505.1| hypothetical protein NWMN_0471 [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161508749|ref|YP_001574408.1| hypothetical protein USA300HOU_0503 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221142299|ref|ZP_03566792.1| hypothetical protein SauraJ_11802 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|258452810|ref|ZP_05700805.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A5948]
gi|262049994|ref|ZP_06022853.1| hypothetical protein SAD30_0222 [Staphylococcus aureus D30]
gi|294850369|ref|ZP_06791102.1| cell cycle protein MesJ [Staphylococcus aureus A9754]
gi|304380527|ref|ZP_07363203.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|61216391|sp|Q5HIG6|TILS_STAAC RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|57285571|gb|AAW37665.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus COL]
gi|87127880|gb|ABD22394.1| MesJ/Ycf62 family protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201827|gb|ABD29637.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150373483|dbj|BAF66743.1| isoleusyl-tRNA-2-lysl-cytidine synthase [Staphylococcus aureus
subsp. aureus str. Newman]
gi|160367558|gb|ABX28529.1| cell cycle control ATP-binding protein MesJ [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|257859496|gb|EEV82349.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A5948]
gi|259161929|gb|EEW46512.1| hypothetical protein SAD30_0222 [Staphylococcus aureus D30]
gi|269940080|emb|CBI48456.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
TW20]
gi|294822793|gb|EFG39229.1| cell cycle protein MesJ [Staphylococcus aureus A9754]
gi|302750400|gb|ADL64577.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340931|gb|EFM06855.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|315196192|gb|EFU26548.1| cell cycle control ATP-binding protein MesJ [Staphylococcus
aureus subsp. aureus CGS01]
gi|320139404|gb|EFW31282.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144181|gb|EFW35949.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329313228|gb|AEB87641.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
T0131]
gi|329729763|gb|EGG66160.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus 21189]
Length = 431
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|39933469|ref|NP_945745.1| argininosuccinate synthase [Rhodopseudomonas palustris CGA009]
gi|192288828|ref|YP_001989433.1| argininosuccinate synthase [Rhodopseudomonas palustris TIE-1]
gi|81698422|sp|Q6NCS7|ASSY_RHOPA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|226729200|sp|B3Q9D3|ASSY_RHOPT RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|39647315|emb|CAE25836.1| argininosuccinate synthase [Rhodopseudomonas palustris CGA009]
gi|192282577|gb|ACE98957.1| Argininosuccinate synthase [Rhodopseudomonas palustris TIE-1]
Length = 445
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
M I+K K + + FSGG D+S L W + +V + + GQ ++ + + +
Sbjct: 1 MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANLGQPDEADYDA---IP 57
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLT 91
+K +E + + L + I +
Sbjct: 58 RKAMEFGAEKARLVDCRTQLVHEGIAAIQAGAFH 91
>gi|117928464|ref|YP_873015.1| argininosuccinate synthase [Acidothermus cellulolyticus 11B]
gi|166219941|sp|A0LUB9|ASSY_ACIC1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|117648927|gb|ABK53029.1| argininosuccinate synthase [Acidothermus cellulolyticus 11B]
Length = 401
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+L +SGG D+S C+ W ++ V ++ D GQ +E+ + + VE
Sbjct: 1 MTERVVLAYSGGLDTSVCIGWITEQTGAEVIAVAVDVGQGEDMEVIRKRALACGAVE 57
>gi|15923499|ref|NP_371033.1| hypothetical protein SAV0509 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926186|ref|NP_373719.1| hypothetical protein SA0467 [Staphylococcus aureus subsp. aureus
N315]
gi|148266968|ref|YP_001245911.1| hypothetical protein SaurJH9_0531 [Staphylococcus aureus subsp.
aureus JH9]
gi|150393014|ref|YP_001315689.1| hypothetical protein SaurJH1_0544 [Staphylococcus aureus subsp.
aureus JH1]
gi|156978837|ref|YP_001441096.1| hypothetical protein SAHV_0506 [Staphylococcus aureus subsp.
aureus Mu3]
gi|253315222|ref|ZP_04838435.1| hypothetical protein SauraC_03485 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255005302|ref|ZP_05143903.2| hypothetical protein SauraM_02505 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794250|ref|ZP_05643229.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9781]
gi|258407233|ref|ZP_05680378.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9763]
gi|258420800|ref|ZP_05683736.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9719]
gi|258429626|ref|ZP_05688300.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9299]
gi|258446104|ref|ZP_05694265.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A6300]
gi|258448012|ref|ZP_05696142.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A6224]
gi|258453842|ref|ZP_05701815.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A5937]
gi|269202129|ref|YP_003281398.1| hypothetical protein SAAV_0456 [Staphylococcus aureus subsp.
aureus ED98]
gi|282895117|ref|ZP_06303337.1| cell cycle protein MesJ [Staphylococcus aureus A8117]
gi|295407399|ref|ZP_06817196.1| cell cycle protein MesJ [Staphylococcus aureus A8819]
gi|296276162|ref|ZP_06858669.1| hypothetical protein SauraMR_07424 [Staphylococcus aureus subsp.
aureus MR1]
gi|297246479|ref|ZP_06930319.1| cell cycle protein MesJ [Staphylococcus aureus A8796]
gi|61216721|sp|Q99W94|TILS_STAAM RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|61217307|sp|Q7A7A6|TILS_STAAN RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|13700399|dbj|BAB41697.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus N315]
gi|14246277|dbj|BAB56671.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|147740037|gb|ABQ48335.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus JH9]
gi|149945466|gb|ABR51402.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus JH1]
gi|156720972|dbj|BAF77389.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu3]
gi|257788222|gb|EEV26562.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9781]
gi|257841191|gb|EEV65640.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9763]
gi|257843192|gb|EEV67605.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9719]
gi|257849685|gb|EEV73652.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9299]
gi|257855081|gb|EEV78023.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A6300]
gi|257858702|gb|EEV81575.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A6224]
gi|257864013|gb|EEV86768.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A5937]
gi|262074419|gb|ACY10392.1| hypothetical protein SAAV_0456 [Staphylococcus aureus subsp.
aureus ED98]
gi|282762535|gb|EFC02675.1| cell cycle protein MesJ [Staphylococcus aureus A8117]
gi|285816208|gb|ADC36695.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus 04-02981]
gi|294967756|gb|EFG43788.1| cell cycle protein MesJ [Staphylococcus aureus A8819]
gi|297176666|gb|EFH35928.1| cell cycle protein MesJ [Staphylococcus aureus A8796]
gi|312829004|emb|CBX33846.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315128637|gb|EFT84640.1| hypothetical protein CGSSa03_01650 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329725061|gb|EGG61556.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus 21172]
Length = 431
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|330827143|ref|YP_004390446.1| tRNA-specific 2-thiouridylase mnmA [Alicycliphilus denitrificans
K601]
gi|329312515|gb|AEB86930.1| tRNA-specific 2-thiouridylase mnmA [Alicycliphilus denitrificans
K601]
Length = 373
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 11/35 (31%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + V +
Sbjct: 2 TASTKQRVVVGLSGGVDSAVTAHLLKQQGHEVVGI 36
>gi|330001721|ref|ZP_08304094.1| tRNA(Ile)-lysidine synthetase [Klebsiella sp. MS 92-3]
gi|328537568|gb|EGF63790.1| tRNA(Ile)-lysidine synthetase [Klebsiella sp. MS 92-3]
Length = 349
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 10/70 (14%)
Query: 12 LLLFSGGQDSSTCLSW--ALDRFD---RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ FSGG DS+ L L D + + + + + V ++ +
Sbjct: 20 LVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHV----HHGLSVHADDWVAH-CRQICQQ 74
Query: 67 WKDSLGEDHI 76
W+ LG H+
Sbjct: 75 WQVPLGVHHV 84
>gi|328544366|ref|YP_004304475.1| NAD synthase family [polymorphum gilvum SL003B-26A1]
gi|326414108|gb|ADZ71171.1| NAD synthase family [Polymorphum gilvum SL003B-26A1]
Length = 562
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVE--TLSFDYGQRNKVELECRLCVRKKIVEL 63
P +L SGG DS+ C + A+D +RV + + Y R + ++ C RK +
Sbjct: 295 PGVILGLSGGIDSAVCAAMAVDALGPERVHGVMMPYRYTSRASI-VDAEACARKLAIRY 352
>gi|325266287|ref|ZP_08132966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Kingella denitrificans ATCC 33394]
gi|324982249|gb|EGC17882.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Kingella denitrificans ATCC 33394]
Length = 389
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 39/135 (28%), Gaps = 15/135 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + ++ SGG DSS + V + Q + + C K+
Sbjct: 27 MYKNQNIVVGLSGGVDSSVTAALLKRGGANVRGVFM---QNWEDDDSDEYCSIKQDSLDA 83
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IFLVFA 119
D +G D + + + + Q PN V N FL
Sbjct: 84 MAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYQAGRTPNPDVLC-NAEIKFKCFLD-- 138
Query: 120 ATLAYRLGITNIVIG 134
A G I G
Sbjct: 139 --YAVAEGAEAIATG 151
>gi|288560731|ref|YP_003424217.1| hypothetical protein mru_1475 [Methanobrevibacter ruminantium M1]
gi|288543441|gb|ADC47325.1| hypothetical protein mru_1475 [Methanobrevibacter ruminantium M1]
Length = 386
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ P A++ SGG DSS L A ++ D
Sbjct: 149 EKPVAIVALSGGTDSSFSLILAKKLGFNPIAVTVD 183
>gi|255528397|ref|ZP_05395198.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296186775|ref|ZP_06855177.1| hypothetical protein CLCAR_2240 [Clostridium carboxidivorans P7]
gi|255507916|gb|EET84355.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296048812|gb|EFG88244.1| hypothetical protein CLCAR_2240 [Clostridium carboxidivorans P7]
Length = 267
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 65/199 (32%), Gaps = 45/199 (22%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K +L FSGG DS+ L A D V+ ++ +
Sbjct: 14 LKSLGKVVLAFSGGVDSTFLL-KASKEALGDNVKAVTI-------------------LSP 53
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-NLPNTFVPGRNIIFLVFAAT 121
+PKW+ ++ + L + +I + + ++ +D L T V
Sbjct: 54 YIPKWEIEEAKELVKELGVKHEIIEAPIIDSIRYNPEDRCYLCKTAV-------FSMILN 106
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYE 179
A G ++ G D Y R +RA+ + + +PL+ L K E
Sbjct: 107 AAKEQGYDCVIDGTNFDDIGDY---RPG-LRAL---------KELEIKSPLLECKLTKAE 153
Query: 180 TWKLAQDIGGQDLVNLILE 198
++++
Sbjct: 154 IRAFSKELKLNTWDKPPYA 172
>gi|238026255|ref|YP_002910486.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia glumae BGR1]
gi|237875449|gb|ACR27782.1| TRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia glumae BGR1]
Length = 393
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS ++ V L
Sbjct: 2 KKQRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|315230892|ref|YP_004071328.1| hypothetical protein TERMP_01129 [Thermococcus barophilus MP]
gi|315183920|gb|ADT84105.1| hypothetical protein TERMP_01129 [Thermococcus barophilus MP]
Length = 225
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 14 LFSGGQDSSTCLSWALDRFDRV-ETLSF 40
LFSGG+DS+ L WA+ + V +S
Sbjct: 6 LFSGGKDSTYALYWAMQQGFDVKYLVSI 33
>gi|116192899|ref|XP_001222262.1| hypothetical protein CHGG_06167 [Chaetomium globosum CBS 148.51]
gi|88182080|gb|EAQ89548.1| hypothetical protein CHGG_06167 [Chaetomium globosum CBS 148.51]
Length = 407
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
A + L +SGG D+S L+W +++ V D GQ + + +KI
Sbjct: 1 MAAKRVCLAYSGGLDTSVILAWLIEQGYTVVAFLADVGQ--NEDYDAVKAKAEKIGA 55
>gi|315181833|gb|ADT88746.1| NH(3)-dependent NAD(+) synthetase [Vibrio furnissii NCTC 11218]
Length = 276
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 66/204 (32%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC--LSW----ALDR-----FDRVETLSFDYG-QRNKVE 49
+ + AL+L SGG DS+TC L+ AL++ + + YG Q+++ E
Sbjct: 31 KLTESGCKALVLGISGGIDSTTCGRLAQLAVDALNQEHGTDQYKFVAVRLPYGAQKDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L ++ + N+
Sbjct: 91 AQQALTFIQPTFSVSVNIKAGVDGLHAASHEALAGTGL-IPSEAAKIDFVKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + ++A +G +L+
Sbjct: 188 APLFGLSKRQVRQVAAALGAPELL 211
>gi|160896253|ref|YP_001561835.1| tRNA-specific 2-thiouridylase MnmA [Delftia acidovorans SPH-1]
gi|205816627|sp|A9BS40|MNMA_DELAS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|160361837|gb|ABX33450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Delftia acidovorans SPH-1]
Length = 372
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 6/31 (19%), Positives = 11/31 (35%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + V +
Sbjct: 3 KHRVVVGLSGGVDSAVTAHLLKQQGHEVVGI 33
>gi|331002094|ref|ZP_08325613.1| hypothetical protein HMPREF0491_00475 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411188|gb|EGG90604.1| hypothetical protein HMPREF0491_00475 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 428
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 67/241 (27%), Gaps = 56/241 (23%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ +FSGG DS L+ D YG K E K+
Sbjct: 143 ICMFSGGMDSFIGAIDLLESTDNKTLFVSHYGG------------GKGTKEFQDILKEKF 190
Query: 72 GEDHILPLAILGDISH--SSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA------ 123
+ + L ++ ++ R+ +F A +A
Sbjct: 191 IKKYKLESRDFHQYYAKVTAGVEDTTRT-------------RSFMFFSHALAVASCLKKS 237
Query: 124 ----------YRLGITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
L I + IG T + + + ++L + V + P
Sbjct: 238 LHLIIPENGFISLNIPSTFSRIGTSSTRTTH-----PHYMTLFQELLDL-IGIKVKLDNP 291
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGK--RDKRYEWGYGCNSCPACYLRQK 229
+ K E D + V LE + +C R ++ C C C +RQ
Sbjct: 292 YQFKTKGEML---LDCKNKLFVKENLENTMSCSHPDNGRMQKEIEARHCGYCLPCVIRQA 348
Query: 230 G 230
Sbjct: 349 A 349
>gi|293402102|ref|ZP_06646241.1| GMP synthase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304494|gb|EFE45744.1| GMP synthase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 437
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K LL SGG DSS + + ++ + ++G K E E + V K ++
Sbjct: 141 KDKKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKGESESVVEVFKNQLDANL 200
Query: 66 KWKDS 70
+ D+
Sbjct: 201 IYADA 205
>gi|283807136|pdb|3K32|A Chain A, The Crystal Structure Of Predicted Subunit Of Trna
Methyltransferase From Methanocaldococcus Jannaschii
Dsm
gi|283807137|pdb|3K32|B Chain B, The Crystal Structure Of Predicted Subunit Of Trna
Methyltransferase From Methanocaldococcus Jannaschii
Dsm
gi|283807138|pdb|3K32|C Chain C, The Crystal Structure Of Predicted Subunit Of Trna
Methyltransferase From Methanocaldococcus Jannaschii
Dsm
gi|283807139|pdb|3K32|D Chain D, The Crystal Structure Of Predicted Subunit Of Trna
Methyltransferase From Methanocaldococcus Jannaschii
Dsm
gi|283807140|pdb|3K32|E Chain E, The Crystal Structure Of Predicted Subunit Of Trna
Methyltransferase From Methanocaldococcus Jannaschii
Dsm
gi|283807141|pdb|3K32|F Chain F, The Crystal Structure Of Predicted Subunit Of Trna
Methyltransferase From Methanocaldococcus Jannaschii
Dsm
Length = 203
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+LFSGG+DSS ++ ++G
Sbjct: 11 VLFSGGKDSSLSAVILKKLGYNPHLITINFG 41
>gi|260597502|ref|YP_003210073.1| tRNA-specific 2-thiouridylase MnmA [Cronobacter turicensis z3032]
gi|260216679|emb|CBA30030.1| tRNA-specific 2-thiouridylase mnmA [Cronobacter turicensis z3032]
Length = 369
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 45/147 (30%), Gaps = 32/147 (21%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELE 51
M+D +K ++ SGG DSS + +VE L DY +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEDYCTAASDLAD 58
Query: 52 CRLCVRKKIVEL----MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
+ K +EL +H L G + + N +K +
Sbjct: 59 AQAVCDKLGIELHTVNFAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKA------- 111
Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 112 -------FLEFA---AEDLGADYIATG 128
>gi|258621706|ref|ZP_05716737.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio mimicus VM573]
gi|258626348|ref|ZP_05721195.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio mimicus VM603]
gi|262171838|ref|ZP_06039516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio mimicus MB-451]
gi|258581400|gb|EEW06302.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio mimicus VM603]
gi|258585937|gb|EEW10655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio mimicus VM573]
gi|261892914|gb|EEY38900.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio mimicus MB-451]
Length = 371
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 3 VEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 40
>gi|254672922|emb|CBA07279.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis alpha275]
Length = 367
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 114 LDYAVG----QGADTIATG 128
>gi|15668871|ref|NP_247674.1| hypothetical protein MJ_0690 [Methanocaldococcus jannaschii DSM
2661]
gi|2833535|sp|Q58102|Y690_METJA RecName: Full=Uncharacterized protein MJ0690
gi|1591405|gb|AAB98685.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 200
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+LFSGG+DSS ++ ++G
Sbjct: 8 VLFSGGKDSSLSAVILKKLGYNPHLITINFG 38
>gi|325571590|ref|ZP_08147090.1| thiamine biosynthesis protein ThiI [Enterococcus casseliflavus ATCC
12755]
gi|325156066|gb|EGC68262.1| thiamine biosynthesis protein ThiI [Enterococcus casseliflavus ATCC
12755]
Length = 402
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS +A+ R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF 209
>gi|307293760|ref|ZP_07573604.1| argininosuccinate synthase [Sphingobium chlorophenolicum L-1]
gi|306879911|gb|EFN11128.1| argininosuccinate synthase [Sphingobium chlorophenolicum L-1]
Length = 405
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K +L FSGG D+S L W + V T + D GQ ++E R R V+
Sbjct: 1 MSDKINRIVLAFSGGLDTSVILKWLQQTYQCEVVTFTADLGQGEELE-PARAKARLMGVK 59
Query: 63 LMPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 EEHIFIDDLREEFVKD 75
>gi|257865149|ref|ZP_05644802.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257871473|ref|ZP_05651126.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC10]
gi|257874765|ref|ZP_05654418.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC20]
gi|257799083|gb|EEV28135.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257805637|gb|EEV34459.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC10]
gi|257808931|gb|EEV37751.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC20]
Length = 402
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS +A+ R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF 209
>gi|171085|gb|AAA34437.1| argininosuccinate synthetase (ARG1; E.C. 6.8.4.5) [Saccharomyces
cerevisiae]
Length = 420
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K + L +SGG D+S L+W LD+ V + GQ + + + + KI
Sbjct: 1 MSKGK--VCLAYSGGLDTSVILAWLLDQATEVVAFMANVGQ--EEDFDAAKVLALKIGA- 55
Query: 64 MPKWKDSLGEDHILPLAI 81
L ED + +
Sbjct: 56 CKFVCGGLSEDFVKDILF 73
>gi|315927619|gb|EFV06950.1| thiamine biosynthesis protein:ExsB [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|315641426|ref|ZP_07896499.1| thiamine biosynthesis protein ThiI [Enterococcus italicus DSM
15952]
gi|315482813|gb|EFU73336.1| thiamine biosynthesis protein ThiI [Enterococcus italicus DSM
15952]
Length = 402
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A +L+ SGG DS +A+ R +E + F
Sbjct: 173 PVGTAGRGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF 209
>gi|305432442|ref|ZP_07401604.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter coli JV20]
gi|304444481|gb|EFM37132.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter coli JV20]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|302837546|ref|XP_002950332.1| argininosuccinate synthase [Volvox carteri f. nagariensis]
gi|300264337|gb|EFJ48533.1| argininosuccinate synthase [Volvox carteri f. nagariensis]
Length = 440
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE--- 62
K +L +SGG D+S L W D + V T + D GQ ELE +K+
Sbjct: 38 KVKKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQ--GEELEPARAKAEKMGVKQI 95
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D++ P+ + + ++
Sbjct: 96 FIDDLREEFVRDYVFPMFRANALYEGTYLLGTSIA 130
>gi|319764949|ref|YP_004128886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alicycliphilus denitrificans BC]
gi|317119510|gb|ADV01999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alicycliphilus denitrificans BC]
Length = 373
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 11/35 (31%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + V +
Sbjct: 2 TASTKQRVVVGLSGGVDSAVTAHLLKQQGHEVVGI 36
>gi|294013099|ref|YP_003546559.1| argininosuccinate synthase [Sphingobium japonicum UT26S]
gi|292676429|dbj|BAI97947.1| argininosuccinate synthase [Sphingobium japonicum UT26S]
Length = 405
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K +L FSGG D+S L W + V T + D GQ ++E R R V+
Sbjct: 1 MSDKINRIVLAFSGGLDTSVILKWLQQTYQCEVVTFTADLGQGEELE-PARAKARLMGVK 59
Query: 63 LMPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 EEHIFIDDLREEFVKD 75
>gi|283957019|ref|ZP_06374491.1| hypothetical protein C1336_000330082 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791520|gb|EFC30317.1| hypothetical protein C1336_000330082 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|262277849|ref|ZP_06055642.1| argininosuccinate synthase [alpha proteobacterium HIMB114]
gi|262224952|gb|EEY75411.1| argininosuccinate synthase [alpha proteobacterium HIMB114]
Length = 395
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+KK +L +SGG D+S L W D++ V + D GQ ++ + KK+
Sbjct: 1 MKKIKKIVLAYSGGLDTSVILKWLQDKYNAEVICYTSDLGQ--EINRKAIYTNAKKLGVK 58
Query: 63 --LMPKWKDSLGEDHILPL 79
++ K+ +D++ P+
Sbjct: 59 KIIIEDLKEKFVKDYVFPM 77
>gi|261210711|ref|ZP_05925003.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. RC341]
gi|260840196|gb|EEX66776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio sp. RC341]
Length = 371
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 3 VEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 40
>gi|255010205|ref|ZP_05282331.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bacteroides fragilis 3_1_12]
Length = 353
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE--LECRLCVRKKIVELMPKWKDSL 71
SGG DSS L+ V ++F Y + E + R + +E + +
Sbjct: 1 MSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNDSTEYLEDARALATRLGIEHITYDAREI 60
Query: 72 GEDHILP 78
I+
Sbjct: 61 FRKKIVD 67
>gi|205355646|ref|ZP_03222416.1| hypothetical protein Cj8421_1687 [Campylobacter jejuni subsp.
jejuni CG8421]
gi|205346423|gb|EDZ33056.1| hypothetical protein Cj8421_1687 [Campylobacter jejuni subsp.
jejuni CG8421]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|157415853|ref|YP_001483109.1| hypothetical protein C8J_1535 [Campylobacter jejuni subsp. jejuni
81116]
gi|157386817|gb|ABV53132.1| hypothetical protein C8J_1535 [Campylobacter jejuni subsp. jejuni
81116]
gi|307748489|gb|ADN91759.1| Putative uncharacterized protein [Campylobacter jejuni subsp.
jejuni M1]
gi|315931678|gb|EFV10639.1| thiamine biosynthesis protein:ExsB [Campylobacter jejuni subsp.
jejuni 327]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|148925774|ref|ZP_01809462.1| hypothetical protein Cj8486_1677 [Campylobacter jejuni subsp.
jejuni CG8486]
gi|145845784|gb|EDK22875.1| hypothetical protein Cj8486_1677 [Campylobacter jejuni subsp.
jejuni CG8486]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|189425287|ref|YP_001952464.1| NAD synthetase [Geobacter lovleyi SZ]
gi|238692115|sp|B3E4K8|NADE_GEOLS RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|189421546|gb|ACD95944.1| NAD+ synthetase [Geobacter lovleyi SZ]
Length = 273
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
A A+L SGG DS+ A + + V + Y R + + E
Sbjct: 28 AKKAVLGLSGGIDSALVCHLAAEALGPENVHAICMPY--RTSNPESEAH--ARLVAEASG 83
Query: 66 KWKDSLGEDHILP 78
+G ++
Sbjct: 84 VQFSVVGITPMVD 96
>gi|57238644|ref|YP_179775.1| hypothetical protein CJE1805 [Campylobacter jejuni RM1221]
gi|57167448|gb|AAW36227.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
gi|315059083|gb|ADT73412.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter jejuni subsp. jejuni S3]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|21672533|ref|NP_660600.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Buchnera aphidicola str. Sg (Schizaphis graminum)]
gi|25009493|sp|Q8K9Q8|MNMA_BUCAP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|21623156|gb|AAM67811.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Buchnera aphidicola str. Sg (Schizaphis graminum)]
Length = 367
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+IKK ++ SGG DSS + + +VE L
Sbjct: 1 MIKKNKKVIIAMSGGVDSSVSAWFLKNENYQVEGL 35
>gi|86152221|ref|ZP_01070432.1| conserved hypothetical protein [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86152888|ref|ZP_01071093.1| trna methyltransferase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613255|ref|YP_001001276.1| hypothetical protein CJJ81176_1624 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167006171|ref|ZP_02271929.1| hypothetical protein Cjejjejuni_08595 [Campylobacter jejuni
subsp. jejuni 81-176]
gi|315125038|ref|YP_004067042.1| hypothetical protein ICDCCJ07001_1546 [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|85840710|gb|EAQ57961.1| conserved hypothetical protein [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85843773|gb|EAQ60983.1| trna methyltransferase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249979|gb|EAQ72938.1| conserved hypothetical protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|315018760|gb|ADT66853.1| conserved hypothetical protein [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|57168817|ref|ZP_00367948.1| conserved hypothetical protein [Campylobacter coli RM2228]
gi|57019864|gb|EAL56547.1| conserved hypothetical protein [Campylobacter coli RM2228]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|86149399|ref|ZP_01067630.1| conserved hypothetical protein [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88596449|ref|ZP_01099686.1| conserved hypothetical protein [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218563222|ref|YP_002345002.1| putative ATP-binding protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85840181|gb|EAQ57439.1| conserved hypothetical protein [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88191290|gb|EAQ95262.1| conserved hypothetical protein [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360929|emb|CAL35730.1| putative ATP-binding protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284926827|gb|ADC29179.1| putative ATP-binding protein [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315928868|gb|EFV08130.1| thiamine biosynthesis protein:ExsB [Campylobacter jejuni subsp.
jejuni 305]
Length = 327
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35
>gi|313238558|emb|CBY13608.1| unnamed protein product [Oikopleura dioica]
Length = 1010
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
K + +L +SGG D+S L + + + RV D GQ E
Sbjct: 609 KMPETVVLAYSGGLDTSCILVYLVKQGYRVVACIADVGQDEDFE 652
>gi|312888854|ref|ZP_07748417.1| tRNA(Ile)-lysidine synthetase [Mucilaginibacter paludis DSM 18603]
gi|311298729|gb|EFQ75835.1| tRNA(Ile)-lysidine synthetase [Mucilaginibacter paludis DSM 18603]
Length = 445
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 45/141 (31%), Gaps = 26/141 (18%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
N + + L+ SGG+DS F++G + C +R
Sbjct: 14 NQLFTQNDRLLVAVSGGRDSVVLAHLLKQAG-------FNFGIAH-----CNFQLRIDEA 61
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFA 119
+ + L + +P + + + + ++ ++ +L T+ RN
Sbjct: 62 QAEQAFTSQLADALTVPFHTISFDTQTYARQNGISTQMAARDLRYTWFEQIRN------- 114
Query: 120 ATLAYRLGITNIVIGVCETDY 140
G + I + + D
Sbjct: 115 -----EHGYSYIAVAHHQNDS 130
>gi|309363500|emb|CAP26308.2| hypothetical protein CBG_06062 [Caenorhabditis briggsae AF16]
Length = 393
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK 47
K P ++ SGG DS+ + V L R +
Sbjct: 2 KVPRVVIGMSGGVDSAVSAFLLKQKGFDVVGLHMVTHSRQR 42
>gi|307719725|ref|YP_003875257.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Spirochaeta thermophila DSM 6192]
gi|306533450|gb|ADN02984.1| probable tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Spirochaeta thermophila DSM 6192]
Length = 352
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 39/123 (31%), Gaps = 10/123 (8%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG-E 73
SGG DSS L V L+F R E + + LG E
Sbjct: 3 MSGGVDSSVTAHLLLSAGIEVVGLTFI---RVNTPAEVDHEGFSEEARAAREVASHLGIE 59
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLA-YRLGITNI 131
H+L L D+ S + + + + PN V R + F A L I
Sbjct: 60 HHVLNL---HDLYTSRVLRRAWEEYRSGRTPNPCVLCNRTLKF-GHLVRYAREVLRADGI 115
Query: 132 VIG 134
G
Sbjct: 116 ATG 118
>gi|294675765|ref|YP_003576380.1| argininosuccinate synthase [Rhodobacter capsulatus SB 1003]
gi|294474585|gb|ADE83973.1| argininosuccinate synthase [Rhodobacter capsulatus SB 1003]
Length = 409
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + V T + D GQ ELE EL
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVITFTADLGQ--GEELEPARAKA----EL 54
Query: 64 MPKWKDSLGEDHILPL 79
M K+++ HI+ +
Sbjct: 55 MGIKKENI---HIVDV 67
>gi|291545182|emb|CBL18291.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruminococcus sp. 18P13]
Length = 359
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 66/194 (34%), Gaps = 20/194 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRN--KVELECRLCVRKKIVELMP 65
++ SGG DSS V ++ +G + + R C + VE
Sbjct: 2 KKVMIGMSGGVDSSVAALRLQQEGYDVTGVTLKLFGDEDIIQAPDATRTCCALRDVEDAR 61
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAAT 121
LG +H++ D S + + PN P R+I F
Sbjct: 62 SVAYRLGFEHLV--FNFKDAFRSHVMQPFCDSYLRGETPN---PCIDCNRHIKFDAM-LR 115
Query: 122 LAYRLGITNIVIG---VCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHT--PLMW 174
A LG I G V D + Y CR +T + + H HT PL
Sbjct: 116 RAEALGYDYIATGHYAVRRQDPATGRYLLCRPKDRSKDQTYVLYNLTQHQLAHTLFPLGD 175
Query: 175 LKKYETWKLAQDIG 188
L+K + ++A+ G
Sbjct: 176 LEKAQVRQMAEAAG 189
>gi|288925153|ref|ZP_06419088.1| argininosuccinate synthase [Prevotella buccae D17]
gi|288337918|gb|EFC76269.1| argininosuccinate synthase [Prevotella buccae D17]
Length = 402
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 58/202 (28%), Gaps = 41/202 (20%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K ++ FSGG D+S + V + G + +L+ K+
Sbjct: 4 NKKKKVVVAFSGGLDTSYTVMKLSQDGWEVYAACANTGGFSAEQLKTNEENAYKLGAKAY 63
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L I G++ ++ + + IF A
Sbjct: 64 VTLDVTQEYYEKSLKYMIFGNVLRNNC---YPISVSSER-----------IFQAIAIARY 109
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A +G I G + G + T L+ E
Sbjct: 110 AKEIGADAIAHG----------------------STGAGNDQIRFDMTFLVMAPGVEIIT 147
Query: 183 LAQD--IGGQDLVNLILEESHT 202
L +D + ++ V+ + E +
Sbjct: 148 LTRDKALSRKEEVDYLNEHGFS 169
>gi|237741464|ref|ZP_04571945.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|260495406|ref|ZP_05815532.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|294785923|ref|ZP_06751211.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
gi|229429112|gb|EEO39324.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|260196943|gb|EEW94464.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|294487637|gb|EFG34999.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
Length = 350
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 21/130 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ SGG DSS L + + + L+F + E E KK+ ++ L
Sbjct: 69 VVPLSGGVDSSVTLIRIVKK-YNLVPLAF--HNDHGFEDEVATDNVKKLCKI-------L 118
Query: 72 GEDHIL---PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
D I+ + + + H + + +++ L + FV G I A +A I
Sbjct: 119 DVDLIIKQQDINFMKKLFHYTHS------MKNRTLSSCFVCG--GIIYANALEIANAFNI 170
Query: 129 TNIVIGVCET 138
++ G +
Sbjct: 171 PMVINGYSKG 180
>gi|124026994|ref|YP_001012314.1| ATPase [Hyperthermus butylicus DSM 5456]
gi|123977688|gb|ABM79969.1| predicted ATPase of the PP-loop superfamily [Hyperthermus butylicus
DSM 5456]
Length = 341
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 44/146 (30%), Gaps = 25/146 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
++K L+ SGG+DS+ L+ A V + G K
Sbjct: 59 ALRKGVKILVAISGGKDSAVTLAALSDLAKKYGIEVYAIHLRLG---------FGEFSAK 109
Query: 60 IVELMPKWKDSLGEDHILPL--AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ E + + LG I+ +GD H K L + FL
Sbjct: 110 VEERVRSLCNMLGIPCIVVDVAEAVGDPVHILARKARRPACSVCGLVKRY-------FLN 162
Query: 118 FAATLAYRLGITNIVIGVCETDYSGY 143
A LG + +G D Y
Sbjct: 163 ---ASAIELGADYVALGHNADDIIAY 185
>gi|91776467|ref|YP_546223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacillus flagellatus KT]
gi|123254088|sp|Q1GZF5|MNMA_METFK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|91710454|gb|ABE50382.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylobacillus flagellatus KT]
Length = 360
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 1 MKKKVIVGMSGGVDSSVAALLLKEQGYEVVGL 32
>gi|301774935|ref|XP_002922890.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Ailuropoda melanoleuca]
Length = 477
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+++ + A ++ SGG DS+ R +V +
Sbjct: 56 SEVGQAARHVVVALSGGVDSAVAALLLRRRGYQVTGV 92
>gi|292670953|ref|ZP_06604379.1| argininosuccinate synthase [Selenomonas noxia ATCC 43541]
gi|292647574|gb|EFF65546.1| argininosuccinate synthase [Selenomonas noxia ATCC 43541]
Length = 404
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 17/135 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV 61
+ K+ +L +SGG D+S + W + +D V + D GQ ++E
Sbjct: 1 MAKQIKKVVLAYSGGLDTSVIIPWLKEHYDGCEVIAVCADIGQGEELE-----------P 49
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ HI+ L + T + L T R +I A
Sbjct: 50 VHDKALASGASKVHIVDLTKEFLEEYVWPTLKAGAVYEGKYLLGTSF-ARPVI--AKALV 106
Query: 122 -LAYRLGITNIVIGV 135
+A R G I G
Sbjct: 107 EIAKREGADAIAHGA 121
>gi|291514578|emb|CBK63788.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alistipes shahii WAL 8301]
Length = 399
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 16/145 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS-FDYGQRN-KVELECRLCVRKKIVELMPKW 67
++ SGG DSS ++ V L ++ +E +C + EL+ +
Sbjct: 3 RVVIGLSGGVDSSVAAWLLKEQGHEVVGLFMINWHDTTGTLEGDCPWHDDRVFAELVARK 62
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNI---IFLVFAATLA 123
D E H++ L+ + + + + + PN V R I +FL A
Sbjct: 63 LD--IELHVVDLS---ADYRTRVVDYMFAEYERGRTPNPDVLCNREIKFDVFLREAL--- 114
Query: 124 YRLGITNIVIG-VCETDYSGYPDCR 147
+LG + G C PD R
Sbjct: 115 -KLGADYVATGHYCRKAEETLPDGR 138
>gi|289191566|ref|YP_003457507.1| GMP synthase, large subunit [Methanocaldococcus sp. FS406-22]
gi|288938016|gb|ADC68771.1| GMP synthase, large subunit [Methanocaldococcus sp. FS406-22]
Length = 310
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 7 KAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K A++ SGG DSS + + + D G K E E E+
Sbjct: 20 KDRRAIIALSGGVDSSVAAVLTHKAIGNNLTAVFVDTGLMRKGERE----------EVER 69
Query: 66 KWKDSLGEDHILPLA---ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++D LG + I+ A L + + + I +F+ +
Sbjct: 70 TFRDKLGLNLIVVDAKDRFLEALKGVTDPEEKRKIIGK-------------LFIDVFEEV 116
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAI-------ETAINLGMESHVTVHTPLMWL 175
A + +V G D I A+ GM + V PL L
Sbjct: 117 AEEIKAEVLVQGTIA----------PDWIETQGKIKSHHNVALPHGMV--LEVVEPLREL 164
Query: 176 KKYETWKLAQDIGGQDLVNL 195
K E LA+++G D +
Sbjct: 165 YKDEVRLLAKELGLPDSIVY 184
>gi|257076391|ref|ZP_05570752.1| argininosuccinate synthase [Ferroplasma acidarmanus fer1]
Length = 413
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 16/127 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LLL+SGG D+S W V TL+ + G N ++ + +
Sbjct: 19 DKVLLLYSGGLDTSVMAKWIQKEMKKEVVTLTLNIGNSN--------------LQKIKEK 64
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG + L + + S + K + P + R + A A G
Sbjct: 65 ALGLGVSDAIVLDVKNEFSEKYIAKEIYADGMYEGYPLSTAIAR-PLMAEKAVLYAEEYG 123
Query: 128 ITNIVIG 134
I G
Sbjct: 124 CNTIAHG 130
>gi|253735244|ref|ZP_04869409.1| cell cycle control ATP-binding protein MesJ [Staphylococcus
aureus subsp. aureus TCH130]
gi|253726804|gb|EES95533.1| cell cycle control ATP-binding protein MesJ [Staphylococcus
aureus subsp. aureus TCH130]
Length = 431
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L D + ++ L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDNYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|229029968|ref|ZP_04186035.1| Asparagine synthetase [Bacillus cereus AH1271]
gi|228731352|gb|EEL82267.1| Asparagine synthetase [Bacillus cereus AH1271]
Length = 633
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSIGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|228939384|ref|ZP_04101974.1| Asparagine synthetase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228972263|ref|ZP_04132876.1| Asparagine synthetase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228978877|ref|ZP_04139244.1| Asparagine synthetase [Bacillus thuringiensis Bt407]
gi|229172946|ref|ZP_04300498.1| Asparagine synthetase [Bacillus cereus MM3]
gi|228610466|gb|EEK67736.1| Asparagine synthetase [Bacillus cereus MM3]
gi|228780834|gb|EEM29045.1| Asparagine synthetase [Bacillus thuringiensis Bt407]
gi|228787447|gb|EEM35413.1| Asparagine synthetase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228820279|gb|EEM66314.1| Asparagine synthetase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326939955|gb|AEA15851.1| asparagine synthetase (glutamine-hydrolyzing) [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 633
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSIGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|256821769|ref|YP_003145732.1| argininosuccinate synthase [Kangiella koreensis DSM 16069]
gi|256795308|gb|ACV25964.1| argininosuccinate synthase [Kangiella koreensis DSM 16069]
Length = 403
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QR---NKVELECRLCVRKK 59
+L FSGG D+S C+ + +++ V TL + G R +++E K+
Sbjct: 2 SQKKVVLAFSGGLDTSFCVPYLMEKGYEVHTLFVNTGGVSREKCHQIEKRALGLGAKQ 59
>gi|218961454|ref|YP_001741229.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Cloacamonas acidaminovorans]
gi|167730111|emb|CAO81023.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Cloacamonas acidaminovorans]
Length = 382
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRL-------CV 56
++K S + SGG DS+ + RV ++ Y +E++ L
Sbjct: 1 MQKKTSVAVGISGGIDSAMTAYLLQESGYRVIGITMQTYD--ENIEMDKTLKSGCFGPAQ 58
Query: 57 RKKIVELMPKWKDSLGEDHILPL 79
+ I+ W+ E +I+PL
Sbjct: 59 EENILSASLLWRKLGIEHYIIPL 81
>gi|145594640|ref|YP_001158937.1| asparagine synthase (glutamine-hydrolyzing) [Salinispora tropica
CNB-440]
gi|145303977|gb|ABP54559.1| asparagine synthase (glutamine-hydrolyzing) [Salinispora tropica
CNB-440]
Length = 536
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 12/83 (14%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFD--------YGQRNKVELECRLCVRKKIVELM 64
++ SGG DSS L A + ++ Y +R L L V ++VEL
Sbjct: 232 VVLSGGLDSSLALLHARELHPDCVAVTVGVPESPDLLYARR----LAKDLGVPHEVVELQ 287
Query: 65 PKWKDSLGEDHILPLAILGDISH 87
P+ + ++ L +
Sbjct: 288 PRDIRLAQIREAIRISELTEYGD 310
>gi|229505277|ref|ZP_04394787.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae BX 330286]
gi|229511053|ref|ZP_04400532.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae B33]
gi|229518173|ref|ZP_04407617.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae RC9]
gi|229608296|ref|YP_002878944.1| tRNA-specific 2-thiouridylase MnmA [Vibrio cholerae MJ-1236]
gi|254848257|ref|ZP_05237607.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae MO10]
gi|255745540|ref|ZP_05419488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholera CIRS 101]
gi|262158386|ref|ZP_06029502.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae INDRE 91/1]
gi|262170249|ref|ZP_06037936.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae RC27]
gi|229344888|gb|EEO09862.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae RC9]
gi|229351018|gb|EEO15959.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae B33]
gi|229357500|gb|EEO22417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae BX 330286]
gi|229370951|gb|ACQ61374.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae MJ-1236]
gi|254843962|gb|EET22376.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae MO10]
gi|255736615|gb|EET92012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholera CIRS 101]
gi|262021264|gb|EEY39978.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae RC27]
gi|262029827|gb|EEY48475.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae INDRE 91/1]
Length = 371
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 3 VEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 40
>gi|83590486|ref|YP_430495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Moorella thermoacetica ATCC 39073]
gi|123524262|sp|Q2RHY7|MNMA_MOOTA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|83573400|gb|ABC19952.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Moorella thermoacetica ATCC 39073]
Length = 357
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 40/127 (31%), Gaps = 11/127 (8%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ SGG DSST + + V ++ + + C K V+ + + L
Sbjct: 2 VAMSGGVDSSTAAALLKEAGYEVIGVTLALWPEDTPPPPGETGCCSLKAVDDARRVANIL 61
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAYRLG 127
+ + D+ + + PN P R I F A LG
Sbjct: 62 DIPYYV--LNFRDLFEREVIDYFIASYLEGETPN---PCIACNRRIKFGAL-LAKARALG 115
Query: 128 ITNIVIG 134
I I G
Sbjct: 116 IDYIATG 122
>gi|61657937|ref|NP_001013413.1| argininosuccinate synthase [Gallus gallus]
gi|82197765|sp|Q5ZJ23|ASSY_CHICK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|53133882|emb|CAG32270.1| hypothetical protein RCJMB04_21j5 [Gallus gallus]
Length = 416
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+ + + +L +SGG D+S L W ++ V + GQ
Sbjct: 1 MAEPRDTVVLAYSGGLDTSCILVWLKEQGYTVIAFLANIGQ 41
>gi|15641141|ref|NP_230773.1| tRNA-specific 2-thiouridylase MnmA [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121587442|ref|ZP_01677211.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae 2740-80]
gi|121726243|ref|ZP_01679533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae V52]
gi|147673628|ref|YP_001216596.1| tRNA-specific 2-thiouridylase MnmA [Vibrio cholerae O395]
gi|153816924|ref|ZP_01969591.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae NCTC 8457]
gi|153822021|ref|ZP_01974688.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae B33]
gi|227081301|ref|YP_002809852.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae M66-2]
gi|14195282|sp|Q9KSX8|MNMA_VIBCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205828983|sp|A5F2F2|MNMA_VIBC3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|9655600|gb|AAF94287.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121548362|gb|EAX58426.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae 2740-80]
gi|121631189|gb|EAX63562.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae V52]
gi|126512511|gb|EAZ75105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae NCTC 8457]
gi|126520486|gb|EAZ77709.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae B33]
gi|146315511|gb|ABQ20050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae O395]
gi|227009189|gb|ACP05401.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae M66-2]
gi|227012943|gb|ACP09153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae O395]
Length = 372
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 4 VEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 41
>gi|332666122|ref|YP_004448910.1| Argininosuccinate synthase [Haliscomenobacter hydrossis DSM 1100]
gi|332334936|gb|AEE52037.1| Argininosuccinate synthase [Haliscomenobacter hydrossis DSM 1100]
Length = 397
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 18/132 (13%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L +SGG D S L D+ V L+ D G + +L+ ++
Sbjct: 2 SNHKVVLAYSGGLDTSFCILHLTKDKGLEVHALTVDTGGFSAEQLKTMEERALQLGAKSF 61
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
+ ++L + D + + G++ + + + + F
Sbjct: 62 RVANALHDYYDQCIRYMVFGNVLRN---NTYPLSVSAERM-----------FQAIETAKY 107
Query: 123 AYRLGITNIVIG 134
A +G + G
Sbjct: 108 AQEIGAGAVAHG 119
>gi|325142740|gb|EGC65116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis 961-5945]
gi|325198666|gb|ADY94122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis G2136]
gi|325201768|gb|ADY97222.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis M01-240149]
gi|325208488|gb|ADZ03940.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis NZ-05/33]
Length = 367
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 114 LDYAVG----QGADTIATG 128
>gi|295660644|ref|XP_002790878.1| argininosuccinate synthase [Paracoccidioides brasiliensis Pb01]
gi|226281130|gb|EEH36696.1| argininosuccinate synthase [Paracoccidioides brasiliensis Pb01]
Length = 413
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ L +SGG D+S L+W +++ V D GQ + E + L +K+V
Sbjct: 1 MPAKEKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQAEDFKEAERKALLIGAQKLV 60
>gi|164688541|ref|ZP_02212569.1| hypothetical protein CLOBAR_02186 [Clostridium bartlettii DSM
16795]
gi|164602954|gb|EDQ96419.1| hypothetical protein CLOBAR_02186 [Clostridium bartlettii DSM
16795]
Length = 362
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 1 MKKKVMIGMSGGVDSSVAAYLLKEQGYDVIGVT 33
>gi|254291552|ref|ZP_04962342.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae AM-19226]
gi|150422504|gb|EDN14461.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae AM-19226]
Length = 372
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 4 VEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 41
>gi|153826012|ref|ZP_01978679.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae MZO-2]
gi|149740232|gb|EDM54379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae MZO-2]
Length = 372
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 4 VEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 41
>gi|153214224|ref|ZP_01949259.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae 1587]
gi|153802718|ref|ZP_01957304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae MZO-3]
gi|153828671|ref|ZP_01981338.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae 623-39]
gi|254225518|ref|ZP_04919128.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae V51]
gi|297578730|ref|ZP_06940658.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae RC385]
gi|124115473|gb|EAY34293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae 1587]
gi|124121758|gb|EAY40501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae MZO-3]
gi|125621988|gb|EAZ50312.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae V51]
gi|148875824|gb|EDL73959.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae 623-39]
gi|297536324|gb|EFH75157.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae RC385]
Length = 372
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 4 VEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 41
>gi|229515510|ref|ZP_04404969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae TMA 21]
gi|229520442|ref|ZP_04409867.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae TM 11079-80]
gi|229525739|ref|ZP_04415144.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae bv. albensis VL426]
gi|229529783|ref|ZP_04419173.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae 12129(1)]
gi|229333557|gb|EEN99043.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae 12129(1)]
gi|229339320|gb|EEO04337.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae bv. albensis VL426]
gi|229342540|gb|EEO07533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae TM 11079-80]
gi|229347279|gb|EEO12239.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Vibrio cholerae TMA 21]
gi|327483833|gb|AEA78240.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Vibrio cholerae LMA3894-4]
Length = 371
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 3 VEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 40
>gi|15899931|ref|NP_344536.1| GMP synthase PP-ATPase subunit [Sulfolobus solfataricus P2]
gi|284173893|ref|ZP_06387862.1| GMP synthase PP-ATPase subunit [Sulfolobus solfataricus 98/2]
gi|44887908|sp|Q97TZ8|GUAAB_SULSO RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|13816676|gb|AAK43326.1| GMP synthase, PP-ATPase domain (guaA) [Sulfolobus solfataricus P2]
gi|261601607|gb|ACX91210.1| GMP synthase (glutamine-hydrolyzing) [Sulfolobus solfataricus 98/2]
Length = 367
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 31/192 (16%)
Query: 8 APSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L SGG DS+T A + D+V + D G +RK E +
Sbjct: 21 NEKVLAAVSGGVDSTTAAVLAYNLLGDKVIPVLVDTG-----------FLRKNEAEKIKD 69
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ ++ + I+ IS + MK + R +F ++L +
Sbjct: 70 YLSNILPNLIIVDKKETFISEIEGIDDAEMKRKR---------FR-ELFYSTISSLMKKF 119
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAI-ETAINLGMES----HVTVHTPLMWLKKYETW 181
++ G D+ I+ + +G+++ T+ PL L K E
Sbjct: 120 NARYLMQGTIAADWVE----TQGGIKTQHNVLVQIGIDTEKEWGFTLIEPLADLYKNEVR 175
Query: 182 KLAQDIGGQDLV 193
+LA+ + +
Sbjct: 176 ELARYLKLPKEI 187
>gi|189346767|ref|YP_001943296.1| argininosuccinate synthase [Chlorobium limicola DSM 245]
gi|229889858|sp|B3ECP2|ASSY_CHLL2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|189340914|gb|ACD90317.1| Argininosuccinate synthase [Chlorobium limicola DSM 245]
Length = 400
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
+ K AL SGG D+S + W D++D + ++ + GQ+ ++E
Sbjct: 1 MSKEKIALAY-SGGLDTSVMIKWLKDKYDAEIVAVTGNLGQQKEIE 45
>gi|333031348|ref|ZP_08459409.1| tRNA(Ile)-lysidine synthase [Bacteroides coprosuis DSM 18011]
gi|332741945|gb|EGJ72427.1| tRNA(Ile)-lysidine synthase [Bacteroides coprosuis DSM 18011]
Length = 431
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 39/137 (28%), Gaps = 22/137 (16%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ KA ++ SGG DS L D ++ R E +V+
Sbjct: 14 NLFTKADKIIVGLSGGADSVALLILLKDLGYSCIAAHCNFHLRG----EEADRDEDFVVQ 69
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L K L H D + +++++ L + R L
Sbjct: 70 LCKKLDIKLRSTH-------FDTYKYAADHKLSIEMAARELRYNWFE-R----------L 111
Query: 123 AYRLGITNIVIGVCETD 139
T + I D
Sbjct: 112 CKEENATKVAIAHHRDD 128
>gi|296273224|ref|YP_003655855.1| PP-loop domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296097398|gb|ADG93348.1| PP-loop domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 378
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
A L FSGG DS+ L A + + +
Sbjct: 45 KAYLSFSGGLDSTVLLHIARLDYPDIVAV 73
>gi|296116217|ref|ZP_06834835.1| argininosuccinate synthase [Gluconacetobacter hansenii ATCC 23769]
gi|295977323|gb|EFG84083.1| argininosuccinate synthase [Gluconacetobacter hansenii ATCC 23769]
Length = 409
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 22/135 (16%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + + E+
Sbjct: 4 KDVKKVVLAYSGGLDTSVILRWLQTAYGCEVVTFTADLGQGEELEPARKKAEMFGVKEIF 63
Query: 65 -PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---A 120
+++ +D + P+ + ++ + A
Sbjct: 64 VEDLRETFVKDFVFPMFRANALYEGQYLLGTSIARP-----------------LIAQRQI 106
Query: 121 TLAYRLGITNIVIGV 135
+A ++G + G
Sbjct: 107 EIAEQVGADAVAHGA 121
>gi|262306023|gb|ACY45604.1| gln amidotransferase [Carcinoscorpius rotundicauda]
Length = 196
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG-QRNKVELECRLCVRK 58
L+L SGG DS+ C + +R+ + + G R L+ +R+
Sbjct: 44 KKVLMLVSGGVDSTVCAALVHRALGEERLIAIHVNNGFMRKNESLQVEHSLRQ 96
>gi|203288638|ref|YP_002223545.1| GMP synthase (glutamine-hydrolysing)(glutamine [Borrelia duttonii
Ly]
gi|201084345|gb|ACH93933.1| GMP synthase (glutamine-hydrolysing)(glutamine [Borrelia duttonii
Ly]
Length = 513
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 65/192 (33%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L SGG DS C L D + + D G R +I+E K+
Sbjct: 217 KVILGLSGGIDSLVCALLINKAIKDNLICVFVDTG-------FLRKNEANEILEFNKKY- 268
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L HI + ++L + + + TFV IF A I
Sbjct: 269 -NLNIKHI----DSSLLFLTNLRDVDDPEEKRKIIGKTFVE----IFEKVAL---EEDDI 316
Query: 129 TNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +D D C I++ L + ++ + PL L K E +L
Sbjct: 317 KYLAQGTIYSD-VIESDVKNNVCSSKNIKSHHNVGGLPDKINLNLLEPLRNLFKDEVIQL 375
Query: 184 AQDIGGQDLVNL 195
+G ++ V
Sbjct: 376 GVQLGLEEEVLY 387
>gi|156934382|ref|YP_001438298.1| tRNA-specific 2-thiouridylase MnmA [Cronobacter sakazakii ATCC
BAA-894]
gi|166234851|sp|A7MFV2|MNMA_ENTS8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|156532636|gb|ABU77462.1| hypothetical protein ESA_02213 [Cronobacter sakazakii ATCC BAA-894]
Length = 369
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 45/147 (30%), Gaps = 32/147 (21%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELE 51
M+D +K ++ SGG DSS + +VE L DY +
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEDYCTAASDLAD 58
Query: 52 CRLCVRKKIVEL----MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
+ K +EL +H L G + + N +K +
Sbjct: 59 AQAVCDKLGIELHTVNFAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKA------- 111
Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 112 -------FLEFA---AEDLGADYIATG 128
>gi|150003570|ref|YP_001298314.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides vulgatus ATCC
8482]
gi|205810521|sp|A6KZ28|MNMA2_BACV8 RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|149931994|gb|ABR38692.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides vulgatus ATCC 8482]
Length = 351
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
+ LL SGG DSS D V ++F Y + N E LE + +++
Sbjct: 4 TESNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKENDTEYLEDARALCERL 61
>gi|153855260|ref|ZP_01996426.1| hypothetical protein DORLON_02440 [Dorea longicatena DSM 13814]
gi|149752259|gb|EDM62190.1| hypothetical protein DORLON_02440 [Dorea longicatena DSM 13814]
Length = 86
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR 53
+ ++ SGG DSS ++ V ++ Q + E E
Sbjct: 2 EKKKVVVGMSGGVDSSVAAWLLKNQGYDVIGVTM---QIWQDEEEAA 45
>gi|118576754|ref|YP_876497.1| ATP-utilizing enzyme of the PP-loop superfamily [Cenarchaeum
symbiosum A]
gi|118195275|gb|ABK78193.1| ATP-utilizing enzyme of the PP-loop superfamily [Cenarchaeum
symbiosum A]
Length = 264
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 60/196 (30%), Gaps = 41/196 (20%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DS+ A D ++ DY + EL V +I
Sbjct: 16 RVMVALSGGVDSALVAYAAHRALGDGAIAVTADYKTLAQDELADAKRVCSEI-------- 67
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
G H+L + + + L GR A LA G+
Sbjct: 68 ---GMQHMLITYDELENADFVRNDSRRCFYCKTELA-----GR-------MAGLAAEHGV 112
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-KYETWKLAQDI 187
IV G D S Y R I A+ + +PL + E + +
Sbjct: 113 KVIVDGTNLDDLSEY---RPG-IAAM---------RDGGILSPLADAGFRKEDVRREARL 159
Query: 188 GGQDLVNLILEESHTC 203
G + + S++C
Sbjct: 160 AGISVHDKP---SNSC 172
>gi|89054712|ref|YP_510163.1| GMP synthase [Jannaschia sp. CCS1]
gi|88864261|gb|ABD55138.1| GMP synthase (glutamine-hydrolyzing) [Jannaschia sp. CCS1]
Length = 535
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 66/190 (34%), Gaps = 31/190 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DSS + + D++ + D+G RL ++VE+
Sbjct: 239 KVICALSGGVDSSVTAALLHEAIGDQLTCVFVDHG-------LLRLNEGAEVVEMFRDHM 291
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-G 127
+ LG++ S + I GR +F+ A ++ G
Sbjct: 292 NLHVIHAEEQDLFLGELDGVSDPETKRKII-----------GR--LFIDVFQKYAGQIEG 338
Query: 128 ITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ G D +SG P TI++ L + +T+ PL L K E
Sbjct: 339 ADFLAQGTLYPDVIESVSFSGGP---SVTIKSHHNVGGLPEKMGLTLVEPLRELFKDEVR 395
Query: 182 KLAQDIGGQD 191
L +++G
Sbjct: 396 ALGRELGLPA 405
>gi|71658016|sp|Q5F7G4|MNMA_NEIG1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 367
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWENDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 114 LDYAVG----QGADTIATG 128
>gi|320160878|ref|YP_004174102.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaerolinea thermophila UNI-1]
gi|319994731|dbj|BAJ63502.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaerolinea thermophila UNI-1]
Length = 361
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +++ RV +
Sbjct: 4 RDETVVVAMSGGVDSSVAAALLVEQGYRVIGM 35
>gi|313668065|ref|YP_004048349.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt ransferase
[Neisseria lactamica ST-640]
gi|313005527|emb|CBN86963.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt ransferase
[Neisseria lactamica 020-06]
Length = 383
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 17 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 72
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 73 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLKEYSAGRTPNPDVLC-NAEIKFKCF 129
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 130 LDYAVG----QGADTIATG 144
>gi|270261459|ref|ZP_06189732.1| tRNA-specific 2-thiouridylase mnmA [Serratia odorifera 4Rx13]
gi|270044943|gb|EFA18034.1| tRNA-specific 2-thiouridylase mnmA [Serratia odorifera 4Rx13]
Length = 367
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVTAYLLQQQGYQVAGL 36
>gi|254805310|ref|YP_003083531.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis alpha14]
gi|254668852|emb|CBA06922.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis alpha14]
gi|319410773|emb|CBY91158.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis WUE 2594]
gi|325140698|gb|EGC63213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis CU385]
Length = 367
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 114 LDYAVG----QGADTIATG 128
>gi|210630940|ref|ZP_03296685.1| hypothetical protein COLSTE_00570 [Collinsella stercoris DSM
13279]
gi|210160255|gb|EEA91226.1| hypothetical protein COLSTE_00570 [Collinsella stercoris DSM
13279]
Length = 327
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
ALL SGG DSS + + ++ + ++G
Sbjct: 37 KKALLALSGGVDSSVVAALLIKAIGKQLICVHVNHG 72
>gi|161899032|ref|YP_315607.2| argininosuccinate synthase [Thiobacillus denitrificans ATCC
25259]
gi|119361341|sp|Q3SHT1|ASSY_THIDA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
Length = 409
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ ++E R + ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELE-PARQKALQFGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 EQIYIDDLREEFVRD 74
>gi|157370264|ref|YP_001478253.1| tRNA-specific 2-thiouridylase MnmA [Serratia proteamaculans 568]
gi|166991124|sp|A8GDD5|MNMA_SERP5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|157322028|gb|ABV41125.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Serratia proteamaculans 568]
Length = 367
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVTAYLLQQQGYQVAGL 36
>gi|194333893|ref|YP_002015753.1| argininosuccinate synthase [Prosthecochloris aestuarii DSM 271]
gi|229889893|sp|B4S7R9|ASSY_PROA2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|194311711|gb|ACF46106.1| Argininosuccinate synthase [Prosthecochloris aestuarii DSM 271]
Length = 401
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
+ K AL SGG D+S + W D++D + ++ + GQ +VE +
Sbjct: 1 MSKEKIALAY-SGGLDTSVMIKWLKDKYDAEIVAVTGNLGQEKEVENLEEKAIA 53
>gi|304387037|ref|ZP_07369292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis ATCC 13091]
gi|304338909|gb|EFM05008.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis ATCC 13091]
Length = 367
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 114 LDYAVG----QGADTIATG 128
>gi|294777621|ref|ZP_06743072.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides vulgatus PC510]
gi|294448689|gb|EFG17238.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides vulgatus PC510]
Length = 351
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
+ LL SGG DSS D V ++F Y + N E LE + +++
Sbjct: 4 TESNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKENDTEYLEDARALCERL 61
>gi|293396528|ref|ZP_06640804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Serratia odorifera DSM 4582]
gi|291420792|gb|EFE94045.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Serratia odorifera DSM 4582]
Length = 370
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVTAYLLQQQGYQVAGL 36
>gi|262306095|gb|ACY45640.1| gln amidotransferase [Polyxenus fasciculatus]
Length = 196
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 8 APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYG 43
L+L SGG DS+ C + AL D+V + D G
Sbjct: 43 KSKVLMLVSGGVDSAVCAALLHKALSE-DQVIAVHIDNG 80
>gi|261251445|ref|ZP_05944019.1| NAD synthetase [Vibrio orientalis CIP 102891]
gi|260938318|gb|EEX94306.1| NAD synthetase [Vibrio orientalis CIP 102891]
Length = 275
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 35/203 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWAL----------DRFDRVETLSFDYG-QRNKVEL 50
+ + +L+L SGG DS+TC A + + + YG Q+++ E
Sbjct: 31 KLQESGCKSLILGISGGVDSTTCGRLAQLAVNQLNEESNAGYQFIAVRLPYGDQKDEDEA 90
Query: 51 ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
+ L + + K + H + S + + ++ FV G
Sbjct: 91 QLALQFIQPTHSVSVNIKAGVDGLH----------AASHIALEGTGLLPEDKAKVDFVKG 140
Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
N+ A +A + V TD+S +
Sbjct: 141 -NVK--ARARMVAQYEIAGYVGGLVIGTDHSA--ENITGFYTKF--------GDGACDMA 187
Query: 171 PLMWLKKYETWKLAQDIGGQDLV 193
PL L K + +LA +G + +
Sbjct: 188 PLFGLSKRQVRELAATLGAPEQL 210
>gi|260579165|ref|ZP_05847056.1| GMP synthase [Corynebacterium jeikeium ATCC 43734]
gi|258602711|gb|EEW15997.1| GMP synthase [Corynebacterium jeikeium ATCC 43734]
Length = 513
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 26/201 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
+ + I A+ SGG DS+ + DR+ + D+G E R V K
Sbjct: 202 VREQIGDEGRAICALSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGE---REQVEKD 258
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
V ++ E A L ++ + + I + + R A
Sbjct: 259 FVAATGAKLVTVDERE----AFLQKLAGVTEPEAKRKAIGAGFIRSFE---R-----AVA 306
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPD-------CRHDTIRAIETAINLGMESHVTVHTPL 172
LA +++ V T YPD I++ L + + PL
Sbjct: 307 GVLADAPEGSSVDFLVQGT---LYPDVVESGGGTGTANIKSHHNVGGLPDDVEFKLVEPL 363
Query: 173 MWLKKYETWKLAQDIGGQDLV 193
L K E + +++G + +
Sbjct: 364 RLLFKDEVRAVGRELGLPEEI 384
>gi|229828318|ref|ZP_04454387.1| hypothetical protein GCWU000342_00376 [Shuttleworthia satelles
DSM 14600]
gi|229792912|gb|EEP29026.1| hypothetical protein GCWU000342_00376 [Shuttleworthia satelles
DSM 14600]
Length = 410
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK---VELECRLCVRKKIVEL 63
+L +SGG D++ + W + + V D GQ + +E R C K+
Sbjct: 3 KDKVVLAYSGGLDTTAIIPWLKENYGYEVICCCVDCGQGEELDGLEERARYCGASKL--Y 60
Query: 64 MPKWKDSLGEDHILP 78
+ DS ED+I+P
Sbjct: 61 IEDITDSFAEDYIIP 75
>gi|226289087|gb|EEH44599.1| argininosuccinate synthase [Paracoccidioides brasiliensis Pb18]
Length = 413
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIV 61
+ L +SGG D+S L+W +++ V D GQ + E + L +K+V
Sbjct: 1 MPAKEKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQAEDFKEAERKALLIGAQKLV 60
>gi|114569244|ref|YP_755924.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Maricaulis maris MCS10]
gi|122316614|sp|Q0ARV1|MNMA_MARMM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|114339706|gb|ABI64986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Maricaulis maris MCS10]
Length = 405
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + V ++ Y + + C + I + +
Sbjct: 37 RVVVAMSGGVDSSVTAALLHHLGYDVVGVTLQLYDHGAAMAKKGACCAGQDIYDAKRVAE 96
Query: 69 DSLGEDHILP 78
++L
Sbjct: 97 ACGFRHYVLD 106
>gi|256819639|ref|YP_003140918.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga ochracea
DSM 7271]
gi|315225100|ref|ZP_07866917.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga ochracea
F0287]
gi|256581222|gb|ACU92357.1| sulfate adenylyltransferase, small subunit [Capnocytophaga
ochracea DSM 7271]
gi|314944783|gb|EFS96815.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga ochracea
F0287]
Length = 299
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCV 56
M ++ + LLFSGG+DS T + A+ F ++ + D G LE R +
Sbjct: 17 MREVAAQFERPALLFSGGKDSITLVHLAMKAFAPMKIPFPLVHIDTGHNFPEALEYRDAL 76
Query: 57 RKKIVELM 64
K+I +
Sbjct: 77 AKRIGAEL 84
>gi|226305831|ref|YP_002765791.1| NH(3)-dependent NAD(+) synthetase [Rhodococcus erythropolis PR4]
gi|259511197|sp|C0ZXG7|NADE_RHOE4 RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|226184948|dbj|BAH33052.1| NH(3)-dependent NAD(+) synthetase [Rhodococcus erythropolis PR4]
Length = 274
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 61/201 (30%), Gaps = 57/201 (28%)
Query: 16 SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH 75
SGGQDS+ + A QR EL + + +P + D
Sbjct: 48 SGGQDSTLAGALA---------------QRAVTELREEGHEAEFVAVRLPYGAQADESDA 92
Query: 76 ILPLAILG---------DISHSSLTKNVAMKIQDNNLPNTFVPG------RNIIFLVFAA 120
+ L + + + + + + L + FV G R
Sbjct: 93 QIALGFIKPDRSITVNVKPGADATAREASEALGNGELRD-FVRGNIKARER------MVI 145
Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
A + +VIG TD++ AI + V + TPL L K +
Sbjct: 146 QYAIAGQLGYLVIG---TDHAA---------EAITGFFTKFGDGGVDI-TPLTGLSKRQG 192
Query: 181 WKLAQDIGGQDLVNLILEESH 201
L Q++G E +
Sbjct: 193 AALLQELGAP-------ESTW 206
>gi|226312727|ref|YP_002772621.1| tRNA U34-sulfurtransferase [Brevibacillus brevis NBRC 100599]
gi|226095675|dbj|BAH44117.1| tRNA U34-sulfurtransferase [Brevibacillus brevis NBRC 100599]
Length = 370
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 5 IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+K+ ++ SGG DSS + V +
Sbjct: 1 MKRPEDTRVVVGMSGGVDSSVTAYLLKQQGYDVIGI 36
>gi|268536380|ref|XP_002633325.1| Hypothetical protein CBG06062 [Caenorhabditis briggsae]
Length = 377
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
K P ++ SGG DS+ + V L
Sbjct: 2 KVPRVVIGMSGGVDSAVSAFLLKQKGFDVVGLH 34
>gi|317056376|ref|YP_004104843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruminococcus albus 7]
gi|315448645|gb|ADU22209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruminococcus albus 7]
Length = 360
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 62/203 (30%), Gaps = 41/203 (20%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L SGG DSST + LD V + + + + C VE
Sbjct: 4 KKVLAAMSGGVDSSTAVKLLLDAGYEVAGATMHLYNNEDIGIREKSCCSLNDVEDARLVA 63
Query: 69 DSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----------GRNIIFLV 117
LG D H+ D + + N PN P GR FL
Sbjct: 64 LKLGIDFHVFN---FSDEFKTCVMDNFVDTYLAGGTPN---PCIECNKHLKFGR---FLD 114
Query: 118 FAATLAYRLGITNIVIGV----CETDYSGYP------DCRHDTIRAIETAINLGMESHVT 167
A LG I G D SG D D ++ + GM
Sbjct: 115 ----RARMLGFDYIATGHYVTSHYDDASGRWLLKRSADSSKD-----QSYVLYGMTQDQL 165
Query: 168 VHT--PLMWLKKYETWKLAQDIG 188
HT P+ + K E +A++ G
Sbjct: 166 AHTIFPVGEMSKPEIRAIAEENG 188
>gi|254881202|ref|ZP_05253912.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 4_3_47FAA]
gi|319640212|ref|ZP_07994938.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 3_1_40A]
gi|254833995|gb|EET14304.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 4_3_47FAA]
gi|317388199|gb|EFV69052.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 3_1_40A]
Length = 351
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
+ LL SGG DSS D V ++F Y + N E LE + +++
Sbjct: 4 TESNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKENDTEYLEDARALCERL 61
>gi|160871950|ref|ZP_02062082.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsiella grylli]
gi|159120749|gb|EDP46087.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rickettsiella grylli]
Length = 361
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS ++ +VE L
Sbjct: 2 KKKRVMVGLSGGVDSSVAALLLKEQGYQVEGL 33
>gi|289577952|ref|YP_003476579.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
gi|289527665|gb|ADD02017.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
Length = 273
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 52/200 (26%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
+ + + K +AL+ FSGG DS+ A +D R ++ K EL+ + +
Sbjct: 8 LQEYLSKLDNALIAFSGGVDST---FLAKVSYDVLGNRALAVTVTSPIHAKSELKEAVEL 64
Query: 57 RKKIVELMPKWKDSLGEDHIL----PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
KKI G H++ + + + + L + K
Sbjct: 65 AKKI-----------GIPHLVVEFNDILEIEEFRKNPLNRCYICKF-------------- 99
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
+A G I+ G D S + R + + +PL
Sbjct: 100 -NLFSRFKAIAEEKGFKYILEGTNADDVSDF---RP----------GRRALKELGILSPL 145
Query: 173 MW--LKKYETWKLAQDIGGQ 190
+ +KK E L++++G
Sbjct: 146 LECGIKKEEIRILSKEMGLP 165
>gi|239787512|emb|CAX83982.1| Argininosuccinate synthase [uncultured bacterium]
Length = 402
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ +L +SGG D+S L W D + V T + D GQ ++E + I +
Sbjct: 1 MMGDVKKVVLAYSGGLDTSIILRWLQDTYGCEVITFTADIGQGEELEPARKKAEAMGIKQ 60
Query: 63 LM-PKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 IFIEDLREEFVRDYVFPM 78
>gi|296139255|ref|YP_003646498.1| asparagine synthase (glutamine-hydrolyzing) [Tsukamurella
paurometabola DSM 20162]
gi|296027389|gb|ADG78159.1| asparagine synthase (glutamine-hydrolyzing) [Tsukamurella
paurometabola DSM 20162]
Length = 654
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 1 MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ D +K A + SGG DS+ + A+ + T++ + + E++
Sbjct: 261 LRDSVKMHMRADVTVGSFLSGGIDSTAVAALAIQHNPDLITITTGFERDGYSEIDVAAES 320
Query: 57 RKKIVE 62
+ I
Sbjct: 321 AEAIGA 326
>gi|212712841|ref|ZP_03320969.1| hypothetical protein PROVALCAL_03938 [Providencia alcalifaciens DSM
30120]
gi|212684533|gb|EEB44061.1| hypothetical protein PROVALCAL_03938 [Providencia alcalifaciens DSM
30120]
Length = 385
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 26/147 (17%)
Query: 1 MNDIIKKAPSA----LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
M+D K+ ++ ++ SGG DSS + +V L + + + C
Sbjct: 13 MSDNSTKSDNSQIKVIVGMSGGVDSSVSAYLLQQQGYQVIGLFMK---NWEEDDDEEYCS 69
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII-- 114
+ D LG + L I+ ++ + + P +I+
Sbjct: 70 AATDLADAQAVCDKLGIE-------LRTINFAAEYWDNVFEHFLEEYKAGRTPNPDILCN 122
Query: 115 -------FLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 123 KEIKFKAFLEFA---AEDLGADYIATG 146
>gi|219120979|ref|XP_002185721.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582570|gb|ACI65191.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 418
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+ P LL +SGG D+S L W ++ V + GQ ++ + +
Sbjct: 1 MTDAKPKLLLAYSGGLDTSVILKWLSEKGFDVIAFCANVGQ-HEEDFSAVKAKAESCGAT 59
Query: 63 --LMPKWKDSLGEDHILPLAILGDI 85
++ + +D++L I
Sbjct: 60 KCVISDLRKEFVDDYVLEAIKCNAI 84
>gi|153005212|ref|YP_001379537.1| tRNA-specific 2-thiouridylase MnmA [Anaeromyxobacter sp. Fw109-5]
gi|205811178|sp|A7HCV7|MNMA_ANADF RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|152028785|gb|ABS26553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaeromyxobacter sp. Fw109-5]
Length = 349
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY 42
L+ SGG DSST + + V +S DY
Sbjct: 2 RVLVALSGGVDSSTAAALLVAEGHDVIGVSMRVADY 37
>gi|86140336|ref|ZP_01058895.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Leeuwenhoekiella blandensis MED217]
gi|85832278|gb|EAQ50727.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Leeuwenhoekiella blandensis MED217]
Length = 399
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + V L
Sbjct: 2 KTVVVGLSGGVDSSVSAYLLKEAGYNVIGL 31
>gi|114563431|ref|YP_750944.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella frigidimarina NCIMB 400]
gi|122299537|sp|Q081F9|MNMA_SHEFN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|114334724|gb|ABI72106.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella frigidimarina NCIMB 400]
Length = 372
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + VE L
Sbjct: 5 NPTSNGKKVIVGMSGGVDSSVSAYLLMQQGFEVEGL 40
>gi|297180756|gb|ADI16963.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [uncultured Sphingobacteriales bacterium
HF0010_19H17]
Length = 441
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 19/57 (33%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
K L+ SGG DS L VE ++ R + V++ L
Sbjct: 16 KDDKILVALSGGLDSVALLYLMHMSGFYVEAAHCNFNLRGEESDGDAQFVKELCAAL 72
>gi|240014473|ref|ZP_04721386.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae DGI18]
gi|240120995|ref|ZP_04733957.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae PID24-1]
gi|268599754|ref|ZP_06133921.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae MS11]
gi|268583885|gb|EEZ48561.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae MS11]
Length = 383
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 40/139 (28%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 17 MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWENDDNDEYCSIKQD 72
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 73 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 129
Query: 116 LVFAATLAYRLGITNIVIG 134
L A G I G
Sbjct: 130 LD----YAVEQGADTIATG 144
>gi|255659674|ref|ZP_05405083.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mitsuokella multacida DSM 20544]
gi|260848239|gb|EEX68246.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mitsuokella multacida DSM 20544]
Length = 366
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
++ SGG DSS + ++ ++
Sbjct: 3 KKKVVVAMSGGVDSSLTAALLKEQGYEAIGVTMR 36
>gi|149911763|ref|ZP_01900368.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
[Moritella sp. PE36]
gi|149805151|gb|EDM65172.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
[Moritella sp. PE36]
Length = 404
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELE 51
+ + ++ +SGG D+S L W + +D E ++F D GQ ELE
Sbjct: 2 KMTQTVKKIVVAYSGGLDTSVILPWLQENYDNCEIIAFVADVGQ-GAEELE 51
>gi|167648718|ref|YP_001686381.1| argininosuccinate synthase [Caulobacter sp. K31]
gi|189046384|sp|B0T3Z9|ASSY_CAUSK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|167351148|gb|ABZ73883.1| Argininosuccinate synthase [Caulobacter sp. K31]
Length = 407
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE 62
K +L +SGG D+S L W + V T + D GQ ++E + +
Sbjct: 2 ANKPVKKVVLAYSGGLDTSIILKWLQTEYGAEVVTFTADLGQGEEIEPARAKALAAGVKP 61
Query: 63 ---LMPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 62 ENIFIEDVREEFVRDYVFPM 81
>gi|56460418|ref|YP_155699.1| tRNA-specific 2-thiouridylase MnmA [Idiomarina loihiensis L2TR]
gi|73920125|sp|Q5QYZ7|MNMA_IDILO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|56179428|gb|AAV82150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Idiomarina loihiensis L2TR]
Length = 371
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 24/141 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVE 62
+ + ++ SGG DSS + + +VE L +N E + C +
Sbjct: 1 MSNASKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFM----KNWEEDDTDEYCAASDDLA 56
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII-------- 114
K ++LG + L I+ ++ + + P +I+
Sbjct: 57 DAEKVCETLGIE-------LHTINFAAEYWDNVFEYFLEEYKAGRTPNPDIMCNKEIKFK 109
Query: 115 -FLVFAATLAYRLGITNIVIG 134
FL FA A L I G
Sbjct: 110 AFLEFA---AEALDADYIATG 127
>gi|312216218|emb|CBX96169.1| similar to argininosuccinate synthase [Leptosphaeria maculans]
Length = 415
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+ L +SGG D+ST L W ++ V + GQ
Sbjct: 6 VCLAYSGGLDTSTILKWLIEEGYEVVCFLANVGQ 39
>gi|303244362|ref|ZP_07330698.1| Queuosine synthesis-like protein [Methanothermococcus okinawensis
IH1]
gi|302485257|gb|EFL48185.1| Queuosine synthesis-like protein [Methanothermococcus okinawensis
IH1]
Length = 256
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 26/130 (20%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K P AL+ FSGG DS A FD + ++ + R +K I EL K
Sbjct: 57 KKPKALVAFSGGVDSVASSIIAKKIFD-ITAIT------AYSPIIMRPDNKKNISELAKK 109
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFA-ATLAY 124
+ + + + ++Q + L + P GR + A + A
Sbjct: 110 LN---IKHEFVDIDLN--------------EVQKDTLNGKYHPCGRCHKIIEKAVLSYAK 152
Query: 125 RLGITNIVIG 134
I I+ G
Sbjct: 153 ENDIKYIIYG 162
>gi|289615705|emb|CBI57446.1| unnamed protein product [Sordaria macrospora]
Length = 417
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ++ + L +SGG D+ST L W +++ V + GQ + + E+
Sbjct: 1 MSESKGRVCLAYSGGLDTSTILCWLIEQGYTVVCFLANVGQEENWDEVRAKAKKLGAEEM 60
Query: 64 MPKWKDSLGEDHIL 77
+ D I+
Sbjct: 61 VILDLQQEFVDQIV 74
>gi|218132958|ref|ZP_03461762.1| hypothetical protein BACPEC_00819 [Bacteroides pectinophilus ATCC
43243]
gi|217991831|gb|EEC57835.1| hypothetical protein BACPEC_00819 [Bacteroides pectinophilus ATCC
43243]
Length = 411
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
M DII K +L +SGG D++ + W + F V + D GQ + EL K
Sbjct: 1 MEDIIMK-EKVILAYSGGLDTTAIIPWLKENFDYEVICVCADCGQ--EEELNGLDERAKS 57
Query: 60 IVE---LMPKWKDSLGEDHILP 78
+ D+ ED+I+P
Sbjct: 58 CGASKLYIEDLTDTFAEDYIVP 79
>gi|195867812|ref|ZP_03079812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195660509|gb|EDX53766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
Length = 350
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + V L
Sbjct: 3 VNTKKRVVIGLSGGVDSSVSALLLKQQGYEVIGL 36
>gi|189201423|ref|XP_001937048.1| argininosuccinate synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330922655|ref|XP_003299921.1| hypothetical protein PTT_11028 [Pyrenophora teres f. teres 0-1]
gi|187984147|gb|EDU49635.1| argininosuccinate synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311326191|gb|EFQ91983.1| hypothetical protein PTT_11028 [Pyrenophora teres f. teres 0-1]
Length = 415
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+ L +SGG D+ST L W ++ V + GQ
Sbjct: 6 VCLAYSGGLDTSTILKWLIEEGYEVVCFLANVGQ 39
>gi|171920850|ref|ZP_02932016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 13 str. ATCC 33698]
gi|185178984|ref|ZP_02964738.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|188024081|ref|ZP_02996823.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188518246|ref|ZP_03003776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 11 str. ATCC 33695]
gi|188524394|ref|ZP_03004420.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 12 str. ATCC 33696]
gi|198273769|ref|ZP_03206303.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 4 str. ATCC 27816]
gi|209554475|ref|YP_002284838.1| tRNA-specific 2-thiouridylase MnmA [Ureaplasma urealyticum
serovar 10 str. ATCC 33699]
gi|225550854|ref|ZP_03771803.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 2 str. ATCC 27814]
gi|225551575|ref|ZP_03772521.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 8 str. ATCC 27618]
gi|229487425|sp|B5ZBP8|MNMA_UREU1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|171903054|gb|EDT49343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 13 str. ATCC 33698]
gi|184209268|gb|EDU06311.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|188019125|gb|EDU57165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188998055|gb|EDU67152.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 11 str. ATCC 33695]
gi|195660126|gb|EDX53506.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 12 str. ATCC 33696]
gi|198249524|gb|EDY74306.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 4 str. ATCC 27816]
gi|209541976|gb|ACI60205.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 10 str. ATCC 33699]
gi|225379390|gb|EEH01755.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 8 str. ATCC 27618]
gi|225380008|gb|EEH02370.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ureaplasma urealyticum serovar 2 str. ATCC 27814]
Length = 380
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + V L
Sbjct: 3 VNTKKRVVIGLSGGVDSSVSALLLKQQGYEVIGL 36
>gi|169619928|ref|XP_001803376.1| hypothetical protein SNOG_13164 [Phaeosphaeria nodorum SN15]
gi|111058371|gb|EAT79491.1| hypothetical protein SNOG_13164 [Phaeosphaeria nodorum SN15]
Length = 415
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+ L +SGG D+ST L W ++ V + GQ
Sbjct: 6 VCLAYSGGLDTSTILKWLIEEGYEVVCFLANVGQ 39
>gi|307151112|ref|YP_003886496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cyanothece sp. PCC 7822]
gi|306981340|gb|ADN13221.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cyanothece sp. PCC 7822]
Length = 353
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSST + + V L+
Sbjct: 5 VVGLSGGVDSSTAAATLHHQGYEVVGLT 32
>gi|294140592|ref|YP_003556570.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Shewanella violacea DSS12]
gi|293327061|dbj|BAJ01792.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Shewanella violacea DSS12]
Length = 376
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS L + +VE L
Sbjct: 11 NKKVIVGMSGGVDSSVSAYLLLKQGYQVEGL 41
>gi|225010099|ref|ZP_03700571.1| Argininosuccinate synthase [Flavobacteria bacterium MS024-3C]
gi|225005578|gb|EEG43528.1| Argininosuccinate synthase [Flavobacteria bacterium MS024-3C]
Length = 395
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 46/142 (32%), Gaps = 42/142 (29%)
Query: 9 PSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ-----RNKVELECRLCVRKKIVE 62
+L +SGG D+S C + + V ++ + G +++E + +
Sbjct: 2 KKLVLAYSGGLDTSYCAKYLSAEMGFEVHAVTVNTGGFDPVDLHEMEEKA---IALGAHA 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA-- 120
+ ++ I G+I + NT+ P L +A
Sbjct: 59 FKAIDGVEIFYQKVVKYLIFGNILKN----------------NTY-P------LSVSAER 95
Query: 121 --------TLAYRLGITNIVIG 134
+ A +G ++I G
Sbjct: 96 IVQALELISYAKEVGASHIAHG 117
>gi|108756833|ref|YP_631693.1| tRNA-specific 2-thiouridylase MnmA [Myxococcus xanthus DK 1622]
gi|123374481|sp|Q1D6N0|MNMA_MYXXD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|108460713|gb|ABF85898.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Myxococcus xanthus DK 1622]
Length = 348
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + ++ V ++
Sbjct: 2 RVVVAMSGGVDSSAAAALLKEQGHEVIGIT 31
>gi|71066186|ref|YP_264913.1| argininosuccinate synthase [Psychrobacter arcticus 273-4]
gi|119361311|sp|Q4FR79|ASSY_PSYA2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|71039171|gb|AAZ19479.1| argininosuccinate synthase [Psychrobacter arcticus 273-4]
Length = 412
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRK 58
M + K + ++L +SGG D+S W + +D V T + D GQ +VE
Sbjct: 1 MAQLDPKTINKIVLAYSGGLDTSIIARWLQETYDAEVITFTADIGQGEEVEPARAKAEAM 60
Query: 59 KIVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
I + + ++ D++ P+ I ++
Sbjct: 61 GIKHIHIEDLREEFARDYVFPMFRANAIYEGEYLLGTSIA 100
>gi|298386289|ref|ZP_06995845.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 1_1_14]
gi|298260666|gb|EFI03534.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 1_1_14]
Length = 426
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 58/201 (28%), Gaps = 41/201 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ L+ SGG DS L + E ++ R E + + +
Sbjct: 14 HLFSPNDKLLIALSGGADSVALLRVLHTAGYQCEAAHCNFHLRG----EESNRDEQFVRQ 69
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L K+ L H + + + K +++++ L + +
Sbjct: 70 LCQKYGIRL---HTIDFNT----TQYATEKRISIEMAARELRYNWFE-----------KI 111
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLM 173
G I + + D + + + G + + PL+
Sbjct: 112 KEECGAHVIAVAHHQDDS----------VETMLLNLIRGTGITGLLGIRPRNGAIVRPLL 161
Query: 174 WLKKYETWKLAQDIGGQDLVN 194
+ + E + Q IG + +
Sbjct: 162 CINREEIIRYLQQIGQNFVTD 182
>gi|302544557|ref|ZP_07296899.1| GMP synthase (Glutamine amidotransferase) [Streptomyces
hygroscopicus ATCC 53653]
gi|302462175|gb|EFL25268.1| GMP synthase (Glutamine amidotransferase) [Streptomyces
himastatinicus ATCC 53653]
Length = 528
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE-------CRLCVRKK 59
A+ SGG DS+ + D++ + D+G K E E V+ K
Sbjct: 223 TKRAICGLSGGVDSAVAAALVQKAIGDQLTCVYVDHGLMRKGESEQVEKDFVAATGVQLK 282
Query: 60 IVELMPKWKDSLG 72
+VE ++ D+L
Sbjct: 283 VVEAEQRFLDALA 295
>gi|256370679|ref|YP_003108504.1| putative bifunctional argininosuccinate synthase/acetyltransferase
[Candidatus Sulcia muelleri SMDSEM]
gi|256009471|gb|ACU52831.1| putative bifunctional argininosuccinate synthase
(ArgG)/acetyltransferase activity of N-acetylglutamate
synthase (ArgA) [Candidatus Sulcia muelleri SMDSEM]
Length = 578
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
LL +SGG D+S CL + ++ +V T+ + G ELE KI +
Sbjct: 187 EKILLAYSGGLDTSYCLKYLTNKGYKVITIIINTGGFKNKELELIEKRALKIGAIYH 243
>gi|228993360|ref|ZP_04153276.1| Argininosuccinate synthase [Bacillus pseudomycoides DSM 12442]
gi|228766428|gb|EEM15071.1| Argininosuccinate synthase [Bacillus pseudomycoides DSM 12442]
Length = 403
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+K ++L +SGG D+S + W ++ + L D G
Sbjct: 1 MKMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 40
>gi|228999413|ref|ZP_04158992.1| Argininosuccinate synthase [Bacillus mycoides Rock3-17]
gi|229006968|ref|ZP_04164597.1| Argininosuccinate synthase [Bacillus mycoides Rock1-4]
gi|228754286|gb|EEM03702.1| Argininosuccinate synthase [Bacillus mycoides Rock1-4]
gi|228760358|gb|EEM09325.1| Argininosuccinate synthase [Bacillus mycoides Rock3-17]
Length = 403
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+K ++L +SGG D+S + W ++ + L D G
Sbjct: 1 MKMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 40
>gi|167562689|ref|ZP_02355605.1| argininosuccinate synthase [Burkholderia oklahomensis EO147]
Length = 404
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K LL +SGG D+ST L + FD RV + GQ+ E R EL+
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELI 60
>gi|113869080|ref|YP_727569.1| tRNA-specific 2-thiouridylase MnmA [Ralstonia eutropha H16]
gi|123133633|sp|Q0K720|MNMA_RALEH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|113527856|emb|CAJ94201.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia eutropha H16]
Length = 361
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 6 KRVVVGMSGGVDSSVTAWLLKQQGYEVIGL 35
>gi|311279962|ref|YP_003942193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacter cloacae SCF1]
gi|308749157|gb|ADO48909.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacter cloacae SCF1]
Length = 369
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYKVEGL 36
>gi|291522307|emb|CBK80600.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coprococcus catus GD/7]
Length = 368
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ ++ SGG DSS + V ++
Sbjct: 3 SKKVVVGMSGGVDSSVAAWLLKQQGYDVIGVT 34
>gi|253998326|ref|YP_003050389.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylovorus sp. SIP3-4]
gi|313200400|ref|YP_004039058.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylovorus sp. MP688]
gi|253985005|gb|ACT49862.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylovorus sp. SIP3-4]
gi|312439716|gb|ADQ83822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylovorus sp. MP688]
Length = 361
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKKRVVVGLSGGVDSSVTALLLKEQGYDVVGL 33
>gi|254472503|ref|ZP_05085903.1| argininosuccinate synthase [Pseudovibrio sp. JE062]
gi|211958786|gb|EEA93986.1| argininosuccinate synthase [Pseudovibrio sp. JE062]
Length = 414
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+L +SGG D+S L W + V T + D GQ ++E R I E+
Sbjct: 7 KKVVLAYSGGLDTSIILKWLQAEYGCEVVTFTADLGQGEELEPARRKAELLGIREIY 63
>gi|167569872|ref|ZP_02362746.1| argininosuccinate synthase [Burkholderia oklahomensis C6786]
Length = 404
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K LL +SGG D+ST L + FD RV + GQ+ E R EL+
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELI 60
>gi|170721856|ref|YP_001749544.1| asparagine synthase [Pseudomonas putida W619]
gi|169759859|gb|ACA73175.1| asparagine synthase (glutamine-hydrolyzing) [Pseudomonas putida
W619]
Length = 611
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 14 LFSGGQDSSTCLSWAL-----DRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELMPKW 67
L SGG DS+ + A ++ RV + S D+ GQ + + + R + L
Sbjct: 263 LLSGGLDSTILTAMAQQRLTAEQGGRVNSFSVDFIGQAEQFQSDTFRPERDEPYALAA-- 320
Query: 68 KDSLGEDHILPLAILGDI 85
+ +G H L G++
Sbjct: 321 AEHIGSHHQTILIDNGEL 338
>gi|119361314|sp|Q2RMV0|ASSY_RHORT RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
Length = 404
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 5 IKKA--PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV 61
+KK +L +SGG D+S L W D +D V T + D GQ ++E + I
Sbjct: 1 MKKGDVKKVVLAYSGGLDTSIILRWLQDEYDCEVVTFTADIGQGEELEPARQKAEMMGIK 60
Query: 62 EL-MPKWKDSLGEDHILPL 79
E+ + ++ D++ P+
Sbjct: 61 EIYIEDLREEFVRDYVFPM 79
>gi|54302590|ref|YP_132583.1| NAD synthetase [Photobacterium profundum SS9]
gi|81697171|sp|Q6LIU7|NADE_PHOPR RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|46916014|emb|CAG22783.1| putative NAD synthase [Photobacterium profundum SS9]
Length = 278
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 65/199 (32%), Gaps = 38/199 (19%)
Query: 9 PSALLL-FSGGQDSSTC--LSWALDRF---------DRVETLSFDYG-QRNKVELECRLC 55
+++L SGG DS+TC L+ + + YG Q ++ E + L
Sbjct: 37 CKSIVLGISGGVDSTTCGRLAQLAVNGLNDESNSSTYQFVAVRLPYGEQHDEHEAQMALS 96
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
K + KD + H L L + K+ + N+ R
Sbjct: 97 FIKPSHSVSVNIKDGVDGIHASTLFALKGTGLT-PEKDAKIDFVKGNVK-----AR---- 146
Query: 116 LVFAATLAYRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A +A + I +V G V TD+S + PL
Sbjct: 147 ---ARMIA-QYEIAGLVGGLVLGTDHSA--ENITGFYTKF--------GDGACDLAPLFG 192
Query: 175 LKKYETWKLAQDIGGQDLV 193
L K + +A +G D++
Sbjct: 193 LNKRQVRLIASKLGAPDVL 211
>gi|29347003|ref|NP_810506.1| putative cell-cycle protein [Bacteroides thetaiotaomicron VPI-5482]
gi|61216643|sp|Q8A7D1|TILS_BACTN RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|29338901|gb|AAO76700.1| putative cell-cycle protein [Bacteroides thetaiotaomicron VPI-5482]
Length = 426
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 57/192 (29%), Gaps = 41/192 (21%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L + E ++ R E + + +L K+ L
Sbjct: 23 LVALSGGADSVALLRVLHTAGYQCEAAHCNFHLRG----EESNRDERFVRQLCQKYGIRL 78
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
HI + + K +++++ L + + G I
Sbjct: 79 ---HITDFNT----TQYATEKRISIEMAARELRYNWFE-----------KIKEECGAHVI 120
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKYETWK 182
+ + D + + + G + + PL+ + + E +
Sbjct: 121 AVAHHQDDS----------VETMLFNLIRGTGITGLLGIRPRNGAIVRPLLCINREEIIR 170
Query: 183 LAQDIGGQDLVN 194
Q IG + +
Sbjct: 171 YLQQIGQDFVTD 182
>gi|322833617|ref|YP_004213644.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rahnella sp. Y9602]
gi|321168818|gb|ADW74517.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rahnella sp. Y9602]
Length = 369
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVEGL 36
>gi|315607410|ref|ZP_07882408.1| argininosuccinate synthase [Prevotella buccae ATCC 33574]
gi|315250910|gb|EFU30901.1| argininosuccinate synthase [Prevotella buccae ATCC 33574]
Length = 413
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 58/202 (28%), Gaps = 41/202 (20%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K ++ FSGG D+S + V + G + +L+ K+
Sbjct: 15 NKKKKVVVAFSGGLDTSYTVMKLSQDGWEVYAACANTGGFSAEQLKTNEENAYKLGAKAY 74
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L I G++ ++ + + IF A
Sbjct: 75 VTLDVTQEYYEKSLKYMIFGNVLRNNC---YPISVSSER-----------IFQAIAIARY 120
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A +G I G + G + T L+ E
Sbjct: 121 AKEIGADAIAHG----------------------STGAGNDQIRFDMTFLVMAPGVEIIT 158
Query: 183 LAQD--IGGQDLVNLILEESHT 202
L +D + ++ V+ + E +
Sbjct: 159 LTRDKALSRKEEVDYLNEHGFS 180
>gi|240113689|ref|ZP_04728179.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria gonorrhoeae MS11]
Length = 367
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 40/139 (28%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWENDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L A G I G
Sbjct: 114 LD----YAVEQGADTIATG 128
>gi|256390704|ref|YP_003112268.1| GMP synthase [Catenulispora acidiphila DSM 44928]
gi|256356930|gb|ACU70427.1| GMP synthase, large subunit [Catenulispora acidiphila DSM 44928]
Length = 523
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 62/206 (30%), Gaps = 49/206 (23%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE-------CRLCVRKK 59
A+ SGG DS+ + +++ + D+G K E E V+ K
Sbjct: 218 TKRAICGLSGGVDSAVAAAIVQKAVGEQLTCVFVDHGLLRKGEAEQVEKDFVAATGVQLK 277
Query: 60 IVELMPKWKDSLG------EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
+V+ ++ +L E + + + + V P R
Sbjct: 278 VVDAEQRFLSALAGVSDPEEKRKIIGREFIRVFEQAEREIVEQSADAGE------PVR-- 329
Query: 114 IFLVFAATLAYRL------GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
FLV + G NI G PD +
Sbjct: 330 -FLVQGTLYPDVVESGGGTGAANIKSHHNVG---GLPD-----------------DLQFE 368
Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLV 193
+ PL L K E ++ +++G + +
Sbjct: 369 LIEPLRKLFKDEVRQVGRELGLPEAI 394
>gi|145352290|ref|XP_001420484.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580718|gb|ABO98777.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 394
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K +L SGG DSS L+
Sbjct: 5 KPLRVAVLLSGGVDSSVALALLRAAGHECVAF 36
>gi|126653986|ref|ZP_01725821.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bacillus sp. B14905]
gi|126589503|gb|EAZ83646.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bacillus sp. B14905]
Length = 137
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V +
Sbjct: 11 RVVVGMSGGVDSSVAAYLLKQQGYEVIGI 39
>gi|145589976|ref|YP_001156573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|205816900|sp|A4SZU5|MNMA_POLSQ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|145048382|gb|ABP35009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 370
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS ++ V L
Sbjct: 13 QTKKVVIGMSGGVDSSVAAWMLKEQGFEVIGL 44
>gi|325684233|gb|EGD26408.1| argininosuccinate synthase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 371
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVE-LECRLCVR 57
MN K +L +SGG D+S + W + + + +S + GQ +++E LE +
Sbjct: 1 MNIDKSKIKKIVLAYSGGLDTSVIIPWLKENYNNPEIIAVSANVGQGDELEGLEEKAKNS 60
Query: 58 KKIVELMPKWKDSLGEDHILP 78
++ ++ D++LP
Sbjct: 61 GAAKLVVANLEEEYVNDYLLP 81
>gi|300811174|ref|ZP_07091685.1| argininosuccinate synthase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|313123551|ref|YP_004033810.1| argininosuccinate synthase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|300497839|gb|EFK32850.1| argininosuccinate synthase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|312280114|gb|ADQ60833.1| Argininosuccinate synthase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 408
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVE-LECRLCVR 57
MN K +L +SGG D+S + W + + + +S + GQ +++E LE +
Sbjct: 1 MNIDKSKIKKIVLAYSGGLDTSVIIPWLKENYNNPEIIAVSANVGQGDELEGLEEKAKNS 60
Query: 58 KKIVELMPKWKDSLGEDHILP 78
++ ++ D++LP
Sbjct: 61 GAAKLVVANLEEEYVNDYLLP 81
>gi|295096181|emb|CBK85271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 370
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYKVEGL 36
>gi|261251794|ref|ZP_05944368.1| argininosuccinate synthase [Vibrio orientalis CIP 102891]
gi|260938667|gb|EEX94655.1| argininosuccinate synthase [Vibrio orientalis CIP 102891]
Length = 404
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 46/151 (30%), Gaps = 25/151 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I K L LFSGG DS+ L +V ++ D G+ E + +
Sbjct: 13 ISKSVDHVLTLFSGGLDSTYLLDLLKTSKVKVTAVAIDLGEGVDEENLTLITDHYGVDLR 72
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K E ++ + + ++ I + A LA
Sbjct: 73 IIDAKPEFVEHSLVSAIQAQALYLGDYPVSSSLSRP--------------IIVQKAVALA 118
Query: 124 YRLGITNIVIGVCET-----------DYSGY 143
LG I+ ++ + SGY
Sbjct: 119 EMLGCGAIIHTANQSQNSLRRLNGAIEASGY 149
>gi|198453521|ref|XP_001359229.2| GA12079 [Drosophila pseudoobscura pseudoobscura]
gi|198132392|gb|EAL28374.2| GA12079 [Drosophila pseudoobscura pseudoobscura]
Length = 419
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELMP 65
+ +L +SGG D+S L W LD+ V + D GQ+ E + K++ +
Sbjct: 4 ETVILAYSGGLDTSCILKWLLDQQYNVICVLADVGQKEDFAAAEKKALNIGANKVIVVDA 63
Query: 66 KWKDSLGEDHILPLAILGDI 85
K S ED+I P +G I
Sbjct: 64 K--QSFVEDYIWPAIQMGLI 81
>gi|194759139|ref|XP_001961807.1| GF15152 [Drosophila ananassae]
gi|190615504|gb|EDV31028.1| GF15152 [Drosophila ananassae]
Length = 680
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
+ LLL SGG DSS C + ++ + D G K E E ++I
Sbjct: 228 SNKVLLLVSGGVDSSVCAALLRRALYPNQIIAVHVDNGFMRKDESEKVERSLREI 282
>gi|154482543|ref|ZP_02024991.1| hypothetical protein EUBVEN_00210 [Eubacterium ventriosum ATCC
27560]
gi|149736568|gb|EDM52454.1| hypothetical protein EUBVEN_00210 [Eubacterium ventriosum ATCC
27560]
Length = 416
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRK 58
M D +L +SGG D++ + W + + V D GQ N+++ LE R
Sbjct: 1 MEDFKMAKEKVILAYSGGLDTTAIIPWLKENYDYDVVCCCVDCGQGNELDGLEERAKYSG 60
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ D +D+I+P G + + +M
Sbjct: 61 AAKLYIEDITDEFCDDYIIPCVQAGAVYENKYLLGTSMA 99
>gi|83595080|ref|YP_428832.1| argininosuccinate synthase [Rhodospirillum rubrum ATCC 11170]
gi|83577994|gb|ABC24545.1| argininosuccinate synthase [Rhodospirillum rubrum ATCC 11170]
Length = 419
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 5 IKKA--PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV 61
+KK +L +SGG D+S L W D +D V T + D GQ ++E + I
Sbjct: 16 MKKGDVKKVVLAYSGGLDTSIILRWLQDEYDCEVVTFTADIGQGEELEPARQKAEMMGIK 75
Query: 62 EL-MPKWKDSLGEDHILPL 79
E+ + ++ D++ P+
Sbjct: 76 EIYIEDLREEFVRDYVFPM 94
>gi|296102847|ref|YP_003612993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295057306|gb|ADF62044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 370
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYKVEGL 36
>gi|254786815|ref|YP_003074244.1| tRNA(Ile)-lysidine synthase domain containing protein
[Teredinibacter turnerae T7901]
gi|237683861|gb|ACR11125.1| tRNA(Ile)-lysidine synthase domain containing protein
[Teredinibacter turnerae T7901]
Length = 436
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYG--------QRNKVELECRL 54
++ A + FSGG DS+ L A + ++ + ++ QR+ + L
Sbjct: 13 QLRDAKGVWIAFSGGLDSTVLLHQAAQLGLEHLQAVHVNHQLSPNAQAWQRHCEDTANSL 72
Query: 55 CVRKKIVELMPKWKDSLGED 74
V + + ED
Sbjct: 73 GVPLTVRTVSVDDFGGGVED 92
>gi|242810560|ref|XP_002485605.1| argininosuccinate synthase [Talaromyces stipitatus ATCC 10500]
gi|218716230|gb|EED15652.1| argininosuccinate synthase [Talaromyces stipitatus ATCC 10500]
Length = 416
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
A + L +SGG D+S L W +++ V D GQ + +K +
Sbjct: 1 MAKPKVCLAYSGGLDTSVILKWLIEQGYDVVAFMADVGQN----EDFAAAEKKALAIGAV 56
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN 93
K+ + + I +++ ++
Sbjct: 57 KFVVEDLKREFVEELCFRAIQCNAIFED 84
>gi|195998796|ref|XP_002109266.1| hypothetical protein TRIADDRAFT_21771 [Trichoplax adhaerens]
gi|190587390|gb|EDV27432.1| hypothetical protein TRIADDRAFT_21771 [Trichoplax adhaerens]
Length = 399
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
+ ++L +SGG D+S L W ++ V D GQ +E
Sbjct: 1 MSDEKETVVLAYSGGLDTSCILVWLQEQGFNVIAYMADVGQEEDME 46
>gi|218439179|ref|YP_002377508.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. PCC 7424]
gi|226704768|sp|B7KHE5|MNMA_CYAP7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|218171907|gb|ACK70640.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cyanothece sp. PCC 7424]
Length = 349
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSST + + V L+
Sbjct: 3 RVVVGLSGGVDSSTAAASLHHQGYDVVGLT 32
>gi|124485195|ref|YP_001029811.1| hypothetical protein Mlab_0368 [Methanocorpusculum labreanum Z]
gi|124362736|gb|ABN06544.1| ExsB family protein [Methanocorpusculum labreanum Z]
Length = 251
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+++I+++ AL+ SGG DS T L+ + V +
Sbjct: 3 LSEILREHSPALVALSGGTDSMTLLAAFVKEGGPVSAATIR 43
>gi|56416599|ref|YP_153673.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaplasma marginale str. St. Maries]
gi|222474965|ref|YP_002563380.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
[Anaplasma marginale str. Florida]
gi|269958985|ref|YP_003328774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaplasma centrale str. Israel]
gi|81359210|sp|Q5PBB1|MNMA_ANAMM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|56387831|gb|AAV86418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaplasma marginale str. St. Maries]
gi|222419101|gb|ACM49124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
[Anaplasma marginale str. Florida]
gi|269848816|gb|ACZ49460.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaplasma centrale str. Israel]
Length = 387
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 15/131 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ ++ SGG DSS + +R +V + + C I +
Sbjct: 30 TVVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVAST 89
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATLA 123
++L ++ + + + P N V R+++ A
Sbjct: 90 LGFPHYVLD---YEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDML------KAA 140
Query: 124 YRLGITNIVIG 134
+G + G
Sbjct: 141 RAIGGDVVATG 151
>gi|146278683|ref|YP_001168842.1| argininosuccinate synthase [Rhodobacter sphaeroides ATCC 17025]
gi|166221013|sp|A4WVX3|ASSY_RHOS5 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|145556924|gb|ABP71537.1| argininosuccinate synthase [Rhodobacter sphaeroides ATCC 17025]
Length = 408
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ++E V I
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPAREKAVMLGI 57
>gi|119775197|ref|YP_927937.1| tRNA-specific 2-thiouridylase MnmA [Shewanella amazonensis SB2B]
gi|205816912|sp|A1S7B1|MNMA_SHEAM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|119767697|gb|ABM00268.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella amazonensis SB2B]
Length = 377
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 14 NSSKKVIVGMSGGVDSSVSAYLLKQQGYQVEGL 46
>gi|77464790|ref|YP_354294.1| argininosuccinate synthase [Rhodobacter sphaeroides 2.4.1]
gi|126463633|ref|YP_001044747.1| argininosuccinate synthase [Rhodobacter sphaeroides ATCC 17029]
gi|221640709|ref|YP_002526971.1| argininosuccinate synthase [Rhodobacter sphaeroides KD131]
gi|332559686|ref|ZP_08414008.1| argininosuccinate synthase [Rhodobacter sphaeroides WS8N]
gi|119361315|sp|Q3IYJ1|ASSY_RHOS4 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|166221012|sp|A3PNQ9|ASSY_RHOS1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|254807530|sp|B9KPT5|ASSY_RHOSK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|77389208|gb|ABA80393.1| argininosuccinate synthase [Rhodobacter sphaeroides 2.4.1]
gi|126105297|gb|ABN77975.1| argininosuccinate synthase [Rhodobacter sphaeroides ATCC 17029]
gi|221161490|gb|ACM02470.1| Argininosuccinate synthase [Rhodobacter sphaeroides KD131]
gi|332277398|gb|EGJ22713.1| argininosuccinate synthase [Rhodobacter sphaeroides WS8N]
Length = 408
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ++E V I
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPAREKAVMLGI 57
>gi|172058087|ref|YP_001814547.1| tRNA-specific 2-thiouridylase MnmA [Exiguobacterium sibiricum
255-15]
gi|205816866|sp|B1YJE9|MNMA_EXIS2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|171990608|gb|ACB61530.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Exiguobacterium sibiricum 255-15]
Length = 374
Score = 38.7 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 1 MNDIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN K + ++ SGG DSS + V +
Sbjct: 1 MNTRAKAPEETTVVVGMSGGVDSSVTAYLLKQQGYNVIGI 40
>gi|300715630|ref|YP_003740433.1| conserded uncharacterized protein YcfA [Erwinia billingiae Eb661]
gi|299061466|emb|CAX58580.1| conserded uncharacterized protein YcfA [Erwinia billingiae Eb661]
Length = 241
Score = 38.7 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 59/152 (38%), Gaps = 36/152 (23%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
+ L++F+GG+DS+ + + + V S + G + R + ++ EL ++
Sbjct: 13 KTQLVMFTGGRDSTLAACYLMLQGIPVHLWSGNSGCSLH------RGILSHRVDELKNRF 66
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-NIIFLVFAATLAYRL 126
D + + + + S +++A++ ++++ R N++ L
Sbjct: 67 GDLVVDHTVADI--------SGAFRSIAIEHLEDDILK----YRKNLVLL---------- 104
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
+ I D+ CR + I I I
Sbjct: 105 -GEKLAIHAHLVDF-----CRRNDINTINDGI 130
>gi|294783011|ref|ZP_06748335.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 1_1_41FAA]
gi|294479889|gb|EFG27666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 1_1_41FAA]
Length = 362
Score = 38.7 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
D KK + SGG DSST + + ++
Sbjct: 18 DSDKKGIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|282879019|ref|ZP_06287781.1| tRNA(Ile)-lysidine synthetase [Prevotella buccalis ATCC 35310]
gi|281298854|gb|EFA91261.1| tRNA(Ile)-lysidine synthetase [Prevotella buccalis ATCC 35310]
Length = 441
Score = 38.7 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 24/130 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L +E + C +R + + + L
Sbjct: 25 LVALSGGADSVCLLRCLKALGYHLEAIH------------CNFRLRGEESDRDELFCQEL 72
Query: 72 GEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ +PL + + S + +V++++ L + +N L +G
Sbjct: 73 CQKLEIPLHLAHFDTRSYAQLHHVSIEMAARELR--YAHFKN---------LCKAMGAGG 121
Query: 131 IVIGVCETDY 140
+ +G + D
Sbjct: 122 VCVGHHQDDS 131
>gi|237739900|ref|ZP_04570381.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 2_1_31]
gi|229423508|gb|EEO38555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 2_1_31]
Length = 362
Score = 38.7 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
D KK + SGG DSST + + ++
Sbjct: 18 DSDKKGIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|227484962|ref|ZP_03915278.1| thiamine biosynthesis protein [Anaerococcus lactolyticus ATCC
51172]
gi|227237117|gb|EEI87132.1| thiamine biosynthesis protein [Anaerococcus lactolyticus ATCC
51172]
Length = 405
Score = 38.7 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 58/186 (31%), Gaps = 29/186 (15%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI--VELMPKWKDSLGEDHI 76
DS R +++ L F + + ++K I E+M + + +
Sbjct: 205 IDSPVAGFMVAKRGMKIDCLHF-----HSYPFTSKRALQKAIDLAEIMSAYTGKMRVYSV 259
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
I I+ + + + + + A ++ G ++ G
Sbjct: 260 NLANIYKAINQNCERRETTILSRR-------------FMMRIANKISEANGYQALITGES 306
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
+ + IE+ + S + + PL+ + K + ++ IG D
Sbjct: 307 LGQVAS---------QTIESVAVINDSSDLPILRPLIAMDKKDIIDISLKIGSYDKSIEP 357
Query: 197 LEESHT 202
++ +
Sbjct: 358 YDDCCS 363
>gi|261339434|ref|ZP_05967292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacter cancerogenus ATCC 35316]
gi|288318240|gb|EFC57178.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacter cancerogenus ATCC 35316]
Length = 370
Score = 38.7 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYKVEGL 36
>gi|330892534|gb|EGH25195.1| argininosuccinate synthase [Pseudomonas syringae pv. mori str.
301020]
Length = 402
Score = 38.7 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+L +SGG D+S L W D + V T + D GQ +VE + E+
Sbjct: 3 KVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEIY 58
>gi|307131188|ref|YP_003883204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dickeya dadantii 3937]
gi|306528717|gb|ADM98647.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dickeya dadantii 3937]
Length = 370
Score = 38.7 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + RVE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYRVEGL 36
>gi|256828062|ref|YP_003156790.1| argininosuccinate synthase [Desulfomicrobium baculatum DSM 4028]
gi|256577238|gb|ACU88374.1| argininosuccinate synthase [Desulfomicrobium baculatum DSM 4028]
Length = 403
Score = 38.7 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+ K +L +SGG D+S L W ++ V T++ D GQ
Sbjct: 1 MSKIEKVVLAYSGGLDTSAILKWIKKTYECEVITMTADLGQ 41
>gi|194878400|ref|XP_001974055.1| GG21516 [Drosophila erecta]
gi|190657242|gb|EDV54455.1| GG21516 [Drosophila erecta]
Length = 677
Score = 38.7 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
LLL SGG DSS C + ++ + D G K E E + I
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPNQIIAVHVDNGFMRKNESEKVERSLRDI 282
>gi|18311454|ref|NP_563388.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens str. 13]
gi|61216685|sp|Q8XHL1|TILS_CLOPE RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|18146138|dbj|BAB82178.1| probable cell-cycle protein [Clostridium perfringens str. 13]
Length = 469
Score = 38.7 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 15/105 (14%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
N +IK L+ SGG DS L + + V + + + E L
Sbjct: 12 NSMIKSGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
+ EL + DI+ S +N++ ++
Sbjct: 68 AYVEELCKNLNIKCFVKRV-------DINKISEEQNISTEMAGRE 105
>gi|308446824|ref|XP_003087270.1| hypothetical protein CRE_21709 [Caenorhabditis remanei]
gi|308258149|gb|EFP02102.1| hypothetical protein CRE_21709 [Caenorhabditis remanei]
Length = 199
Score = 38.7 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + + + + +
Sbjct: 21 FSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPRKAENYGAVKAR-------- 72
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A I +P
Sbjct: 73 -LVDCRLQLALEGIAAIQCGAFHISTGGVP 101
>gi|157375020|ref|YP_001473620.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella sediminis HAW-EB3]
gi|189040509|sp|A8FUG9|MNMA_SHESH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|157317394|gb|ABV36492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella sediminis HAW-EB3]
Length = 372
Score = 38.7 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS L + +VE L
Sbjct: 11 NKKVIVGMSGGVDSSVSAYLLLKQGYQVEGL 41
>gi|93006688|ref|YP_581125.1| argininosuccinate synthase [Psychrobacter cryohalolentis K5]
gi|119361312|sp|Q1Q9L2|ASSY_PSYCK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|92394366|gb|ABE75641.1| argininosuccinate synthase [Psychrobacter cryohalolentis K5]
Length = 412
Score = 38.7 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRK 58
M + K + ++L +SGG D+S W + +D V T + D GQ +VE
Sbjct: 1 MAQLDPKTINKIVLAYSGGLDTSIIARWLQETYDAEVITFTADIGQGEEVEPARAKAEAM 60
Query: 59 KIVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
I + + ++ D++ P+ I ++
Sbjct: 61 GIKHIHIEDLREEFARDYVFPMFRANAIYEGEYLLGTSIA 100
>gi|281202538|gb|EFA76740.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Polysphondylium pallidum PN500]
Length = 465
Score = 38.7 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+I K P + SGG DS+ + +V+ +
Sbjct: 65 SLINKKPEICVGLSGGVDSAVTAYLLKKQGFKVQCV 100
>gi|257437854|ref|ZP_05613609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Faecalibacterium prausnitzii A2-165]
gi|257199514|gb|EEU97798.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Faecalibacterium prausnitzii A2-165]
Length = 371
Score = 38.7 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 16/46 (34%), Gaps = 5/46 (10%)
Query: 1 MNDIIK-----KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
M D + K P AL+ SGG DSS ++
Sbjct: 1 MRDDMTEAQNTKRPGALIAMSGGVDSSVAAWLMQQAGYDCTGITMR 46
>gi|327273596|ref|XP_003221566.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Anolis carolinensis]
Length = 417
Score = 38.7 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ A + SGG DS+ R V +
Sbjct: 1 MLGARRVVCALSGGVDSAVAAVLLRRRGYDVTGV 34
>gi|171914844|ref|ZP_02930314.1| argininosuccinate synthase [Verrucomicrobium spinosum DSM 4136]
Length = 433
Score = 38.7 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
+L +SGG D+S LSW D +D V + GQ EL+ KK
Sbjct: 1 MKKKIVLAYSGGLDTSVLLSWIKDTYDAEVIAFCANIGQ--DDELKGLNAKAKK 52
>gi|32266720|ref|NP_860752.1| argininosuccinate synthase [Helicobacter hepaticus ATCC 51449]
gi|44887709|sp|Q7VGU9|ASSY_HELHP RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|32262771|gb|AAP77818.1| argininosuccinate synthase [Helicobacter hepaticus ATCC 51449]
Length = 404
Score = 38.7 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 24/138 (17%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE- 62
+ +L +SGG D+S L W D + V T + D GQ +VE ++ I
Sbjct: 1 MAAIKKVVLAYSGGLDTSVILKWLGDNYHCEVVTFTADIGQGEEVEPAREKALKLGIKSE 60
Query: 63 --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA- 119
+ ++ +D + P+ I ++ + A
Sbjct: 61 NIFIEDLREEFIKDFVFPMFRANTIYEGEYLLGTSIARP-----------------LIAK 103
Query: 120 --ATLAYRLGITNIVIGV 135
+A +G I G
Sbjct: 104 RLVEIAKSVGADAIAHGA 121
>gi|33862127|ref|NP_893688.1| hypothetical protein PMM1571 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33634345|emb|CAE20030.1| conserved hypothetical protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 274
Score = 38.7 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 38/187 (20%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +++ + +SGG DS+ S A ++ + ++ + K ++E
Sbjct: 24 KNLNSVCVAYSGGVDSTLVASLAFEQLGSKAIAIT-----------GVSPALAKTLLEEA 72
Query: 65 PKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+G H+ + + L S+S KN + +T FL
Sbjct: 73 KTQARWIGIQHLEIETSELDQSSYSKNPKNRCFACKKELHKHT-------TFLS------ 119
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+L + GV D Y R I+A + A L + K + +
Sbjct: 120 KKLNYKIVCDGVNLDDLDDY---RPG-IKAAKEAGVLSPLALFK-------FTKKDIRDI 168
Query: 184 AQDIGGQ 190
++ +G
Sbjct: 169 SRALGFP 175
>gi|304413559|ref|ZP_07395032.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Candidatus Regiella insecticola
LSR1]
gi|304284402|gb|EFL92795.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Candidatus Regiella insecticola
LSR1]
Length = 367
Score = 38.7 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDHSQK--KIIVGMSGGVDSSVAAYLLKQQGYQVAGL 36
>gi|296119260|ref|ZP_06837828.1| GMP synthase [Corynebacterium ammoniagenes DSM 20306]
gi|295967652|gb|EFG80909.1| GMP synthase [Corynebacterium ammoniagenes DSM 20306]
Length = 512
Score = 38.7 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 10/117 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELECRL 54
+ + I A+ SGG DS+ + DR+ + D+ G+R +VE +
Sbjct: 201 VREQIGPEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVEKDFVA 260
Query: 55 CVRKKIVELMPKWKDSLGEDHILP----LAILGDISHSSLTKNVAMKIQDNNLPNTF 107
K++ ++ +G S + VA ++++ +T
Sbjct: 261 STGAKLITAHEADAFLAKLSGVIDPEAKRKAIGAEFIRSFERAVAQALEESPEGSTV 317
>gi|301114519|ref|XP_002999029.1| argininosuccinate synthase [Phytophthora infestans T30-4]
gi|262111123|gb|EEY69175.1| argininosuccinate synthase [Phytophthora infestans T30-4]
Length = 459
Score = 38.7 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV---- 56
M+ + +L +SGG D+S L W ++ V + GQ + + R
Sbjct: 39 MSVKAQAGDKVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQHGEDYEKVRAKAMSLG 98
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHS 88
KK+ + ++ + +I I S
Sbjct: 99 AKKV--YIEDLREEFVKHYIFEAVKSNAIYES 128
>gi|221633062|ref|YP_002522287.1| tRNA methyl transferase [Thermomicrobium roseum DSM 5159]
gi|221155991|gb|ACM05118.1| tRNA methyl transferase [Thermomicrobium roseum DSM 5159]
Length = 370
Score = 38.7 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 13/40 (32%), Gaps = 1/40 (2%)
Query: 1 MNDI-IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
M+ + A L+ SGG DS+ +
Sbjct: 1 MSGVGTTMAERVLVALSGGVDSAVTAYLLKQAGWEPVGIH 40
>gi|24374174|ref|NP_718217.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella oneidensis MR-1]
gi|30173411|sp|Q8CX40|MNMA_SHEON RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|24348681|gb|AAN55661.1|AE015704_12 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella oneidensis MR-1]
Length = 372
Score = 38.7 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|15837601|ref|NP_298289.1| argininosuccinate synthase [Xylella fastidiosa 9a5c]
gi|24211536|sp|Q9PEM9|ASSY_XYLFA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|9105933|gb|AAF83809.1|AE003937_13 argininosuccinate synthase [Xylella fastidiosa 9a5c]
Length = 401
Score = 38.7 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L FSGG D+S C+ + ++ V T+ D G N+ E R + K+ EL
Sbjct: 2 SKKNIVLAFSGGLDTSFCIPYLKEQGYAVHTVFADTGGVNEEE---RDFIEKRAAEL 55
>gi|117920194|ref|YP_869386.1| tRNA-specific 2-thiouridylase MnmA [Shewanella sp. ANA-3]
gi|166235083|sp|A0KW11|MNMA_SHESA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|117612526|gb|ABK47980.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella sp. ANA-3]
Length = 372
Score = 38.7 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|114047179|ref|YP_737729.1| tRNA-specific 2-thiouridylase MnmA [Shewanella sp. MR-7]
gi|122944742|sp|Q0HW33|MNMA_SHESR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|113888621|gb|ABI42672.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella sp. MR-7]
Length = 372
Score = 38.7 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|288559923|ref|YP_003423409.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
gi|288542633|gb|ADC46517.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
Length = 359
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 11/90 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ I+K L FS G DS+ A + V +++D +
Sbjct: 10 VKQILKDYKKIALAFSAGADSTLLAYLAKESDCDVLAITYD-----------NQIFPEGF 58
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSL 90
+E + D LG H + I +
Sbjct: 59 LEFAKRRADELGIKHEIIENSFLMIYDVAH 88
>gi|270291444|ref|ZP_06197666.1| tRNA methyl transferase [Pediococcus acidilactici 7_4]
gi|304385157|ref|ZP_07367503.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pediococcus acidilactici DSM 20284]
gi|270280290|gb|EFA26126.1| tRNA methyl transferase [Pediococcus acidilactici 7_4]
gi|304329351|gb|EFL96571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pediococcus acidilactici DSM 20284]
Length = 377
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS + V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVVAYLLKKQGYDVVGV 36
>gi|270012865|gb|EFA09313.1| hypothetical protein TcasGA2_TC030725 [Tribolium castaneum]
Length = 687
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
LLL SGG DS+ + R D++ + D G
Sbjct: 230 NNKVLLLVSGGVDSTVAAALLHKALRPDQIIAIHIDNG 267
>gi|218232235|ref|YP_002369206.1| tRNA-specific 2-thiouridylase MnmA [Bacillus cereus B4264]
gi|218160192|gb|ACK60184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus B4264]
Length = 372
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + + ++ SGG DSS ++ V +
Sbjct: 1 MMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 38
>gi|195155452|ref|XP_002018618.1| GL25858 [Drosophila persimilis]
gi|198476816|ref|XP_001357491.2| GA21637 [Drosophila pseudoobscura pseudoobscura]
gi|194114771|gb|EDW36814.1| GL25858 [Drosophila persimilis]
gi|198137863|gb|EAL34561.2| GA21637 [Drosophila pseudoobscura pseudoobscura]
Length = 666
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
+ LLL SGG DSS C + ++ + D G K E E ++I
Sbjct: 228 SNKVLLLVSGGVDSSVCAALLRRALYPNQIIAVHVDNGFMRKNESEKVERSLREI 282
>gi|189240082|ref|XP_001812886.1| PREDICTED: similar to gmp synthase [Tribolium castaneum]
Length = 748
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
LLL SGG DS+ + R D++ + D G
Sbjct: 291 NNKVLLLVSGGVDSTVAAALLHKALRPDQIIAIHIDNG 328
>gi|166367576|ref|YP_001659849.1| tRNA-specific 2-thiouridylase MnmA [Microcystis aeruginosa
NIES-843]
gi|205816884|sp|B0JVR4|MNMA_MICAN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|166089949|dbj|BAG04657.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Microcystis aeruginosa NIES-843]
Length = 352
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + + V L+
Sbjct: 3 KVVVGLSGGVDSSVAAAALHAQGYDVIGLT 32
>gi|170727050|ref|YP_001761076.1| tRNA-specific 2-thiouridylase MnmA [Shewanella woodyi ATCC 51908]
gi|205816913|sp|B1KID0|MNMA_SHEWM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|169812397|gb|ACA86981.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella woodyi ATCC 51908]
Length = 377
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS L + +VE L
Sbjct: 16 NKKVIVGMSGGVDSSVSAYLLLKQGYQVEGL 46
>gi|86570245|gb|ABD04802.1| argininosuccinate synthase [Rhodopseudomonas palustris HaA2]
Length = 462
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
M+ I+K K + + FSGG D+S L W + RV + + GQ
Sbjct: 18 MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQ 64
>gi|73542506|ref|YP_297026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia eutropha JMP134]
gi|123624143|sp|Q46XF1|MNMA_RALEJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|72119919|gb|AAZ62182.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia eutropha JMP134]
Length = 362
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 4 KRVVVGMSGGVDSSVTAWLLKQQGYEVIGL 33
>gi|330994686|ref|ZP_08318609.1| Argininosuccinate synthase [Gluconacetobacter sp. SXCC-1]
gi|329758327|gb|EGG74848.1| Argininosuccinate synthase [Gluconacetobacter sp. SXCC-1]
Length = 409
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 22/135 (16%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ +L +SGG D+S L W + V T + D GQ ++E R + E+
Sbjct: 4 RDVKKVVLAYSGGLDTSVILRWLQTTYNCEVVTFTADLGQGEELEPARRKAEMFGVKEIF 63
Query: 65 -PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---A 120
+++ +D + P+ + ++ + A
Sbjct: 64 VEDLRETFVKDFVFPMFRANALYEGQYLLGTSIARP-----------------LIAQRQI 106
Query: 121 TLAYRLGITNIVIGV 135
+A ++G + G
Sbjct: 107 EIAEQVGADAVAHGA 121
>gi|255002942|ref|ZP_05277906.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
[Anaplasma marginale str. Puerto Rico]
gi|255004068|ref|ZP_05278869.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
[Anaplasma marginale str. Virginia]
Length = 379
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 15/131 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ ++ SGG DSS + +R +V + + C I +
Sbjct: 22 TVVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVAST 81
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATLA 123
++L ++ + + + P N V R+++ A
Sbjct: 82 LGFPHYVLD---YEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDML------KAA 132
Query: 124 YRLGITNIVIG 134
+G + G
Sbjct: 133 RAIGGDVVATG 143
>gi|224476719|ref|YP_002634325.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus carnosus
subsp. carnosus TM300]
gi|254811461|sp|B9DNH6|MNMA_STACT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|222421326|emb|CAL28140.1| putative (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 370
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS ++ V +
Sbjct: 1 MSNQDTRVVVGMSGGVDSSVTAYLLKEQGYDVIGI 35
>gi|212536961|ref|XP_002148636.1| argininosuccinate synthase [Penicillium marneffei ATCC 18224]
gi|210068378|gb|EEA22469.1| argininosuccinate synthase [Penicillium marneffei ATCC 18224]
Length = 416
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
A + L +SGG D+S L W +++ V D GQ + +K +
Sbjct: 1 MAKPKVCLAYSGGLDTSVILKWLIEQGYDVVAFMADVGQ----AEDFAAAEKKALAIGAV 56
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN 93
K+ + + I +++ ++
Sbjct: 57 KFVVEDLKQEFVEELCFRAIQCNAIFED 84
>gi|156937500|ref|YP_001435296.1| PP-loop domain-containing protein [Ignicoccus hospitalis KIN4/I]
gi|156566484|gb|ABU81889.1| PP-loop domain protein [Ignicoccus hospitalis KIN4/I]
Length = 383
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 39/137 (28%), Gaps = 29/137 (21%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD----YGQRNKVELECRLCVRKKI-VE 62
LL SGG+DS L V + D Y +E E V +++ V
Sbjct: 46 PKRVLLGLSGGKDSVALLYLLKKVGTEVVAATVDTVPNY---TSLEAELAKRVAEELGVT 102
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ L L L S +K ++ L
Sbjct: 103 HYTVYAKELYGFTALSYKKLRRAPCSICSKLRRHALE---------------------LL 141
Query: 123 AYRLGITNIVIGVCETD 139
A RLGI I G D
Sbjct: 142 ARRLGIEYIATGHNMDD 158
>gi|84685759|ref|ZP_01013655.1| argininosuccinate synthase [Maritimibacter alkaliphilus HTCC2654]
gi|84665852|gb|EAQ12326.1| argininosuccinate synthase [Rhodobacterales bacterium HTCC2654]
Length = 408
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ++E + I
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPAREKAIMLGI 57
>gi|113969944|ref|YP_733737.1| tRNA-specific 2-thiouridylase MnmA [Shewanella sp. MR-4]
gi|123029751|sp|Q0HJT7|MNMA_SHESM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|113884628|gb|ABI38680.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella sp. MR-4]
Length = 372
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|167037943|ref|YP_001665521.1| ExsB family protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256751779|ref|ZP_05492652.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|320116360|ref|YP_004186519.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166856777|gb|ABY95185.1| ExsB family protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256749307|gb|EEU62338.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|319929451|gb|ADV80136.1| PP-loop domain protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 286
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 65/190 (34%), Gaps = 44/190 (23%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVE 62
K +AL+ FSGG DS+ A +D RV ++ K EL+ + + KKI
Sbjct: 26 KLDNALIAFSGGVDST---FLAKVSYDVLGNRVLAVTATSPMHPKSELKEAVELAKKIG- 81
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
++ + +I I +NL + F +
Sbjct: 82 ---------IPHLVVEFNDILEIEEFRKNPLNRCYICKSNLFSRF------------KAI 120
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYET 180
A G I+ G D S + R + + +PL+ +KK E
Sbjct: 121 AEEKGFKYILEGTNADDVSDF---RP----------GRRALKELGILSPLLECGIKKEEI 167
Query: 181 WKLAQDIGGQ 190
L++++G
Sbjct: 168 RILSKEMGLP 177
>gi|332289173|ref|YP_004420025.1| tRNA-specific 2-thiouridylase MnmA [Gallibacterium anatis UMN179]
gi|330432069|gb|AEC17128.1| tRNA-specific 2-thiouridylase MnmA [Gallibacterium anatis UMN179]
Length = 384
Score = 38.7 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 22 NQQKKVIVGMSGGVDSSVSAYILQQQGYQVEGL 54
>gi|312886176|ref|ZP_07745792.1| Argininosuccinate synthase [Mucilaginibacter paludis DSM 18603]
gi|311301331|gb|EFQ78384.1| Argininosuccinate synthase [Mucilaginibacter paludis DSM 18603]
Length = 395
Score = 38.7 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 18/132 (13%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L +SGG D S C+ D V ++ + G ++ EL+ ++
Sbjct: 1 MKKKVVLAYSGGLDTSFCCIYLTRDLDMEVHSVIVNTGGFSEEELQAVEKRAYEM----- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT---L 122
+ H++ + + +++N P + R + A
Sbjct: 56 ----GVTSHHVVDET-INFYNTCIRYLVYGNVLKNNTYPLSVSAER----VSQATAIANY 106
Query: 123 AYRLGITNIVIG 134
A + + G
Sbjct: 107 AKEINAEYVAHG 118
>gi|295102218|emb|CBK99763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Faecalibacterium prausnitzii L2-6]
Length = 370
Score = 38.7 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 41/138 (29%), Gaps = 11/138 (7%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKI 60
+ P AL+ SGG DSS ++ + V E C ++
Sbjct: 4 TQNTSRRPGALIAMSGGVDSSVAAWLMQRDGFDCTGVTMRLTRNEAVNTEGLHTCCSERD 63
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFL 116
+E + ++ + + + + PN P R + F
Sbjct: 64 IEDAAEVAYAMDIPY--EVLDFTADFQERIIDKFIRVYEAGGTPN---PCIDCNRYMKFD 118
Query: 117 VFAATLAYRLGITNIVIG 134
A G+ ++V G
Sbjct: 119 HL-LRWAEAHGLDHVVTG 135
>gi|149197877|ref|ZP_01874926.1| hypothetical protein LNTAR_05301 [Lentisphaera araneosa HTCC2155]
gi|149139098|gb|EDM27502.1| hypothetical protein LNTAR_05301 [Lentisphaera araneosa HTCC2155]
Length = 417
Score = 38.7 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN----KVELECRLCVRKKIVE 62
K L+LFSGG DS L + L F++ R + E CR +E
Sbjct: 8 KGEKRLVLFSGGADSMALLHLMQSLGELDIVLHFNHNLRGDDSKQDEQFCRNYCEDNGLE 67
Query: 63 LMPKWKDSLGEDH 75
L+ D E H
Sbjct: 68 LIVVNLDLDKERH 80
>gi|153000990|ref|YP_001366671.1| tRNA-specific 2-thiouridylase MnmA [Shewanella baltica OS185]
gi|151365608|gb|ABS08608.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella baltica OS185]
Length = 392
Score = 38.7 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 25 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 60
>gi|160875703|ref|YP_001555019.1| tRNA-specific 2-thiouridylase MnmA [Shewanella baltica OS195]
gi|160861225|gb|ABX49759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella baltica OS195]
gi|315267892|gb|ADT94745.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella baltica OS678]
Length = 392
Score = 38.7 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 25 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 60
>gi|126174691|ref|YP_001050840.1| tRNA-specific 2-thiouridylase MnmA [Shewanella baltica OS155]
gi|125997896|gb|ABN61971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella baltica OS155]
Length = 392
Score = 38.7 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 25 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 60
>gi|237746906|ref|ZP_04577386.1| tRNA-specific 2-thiouridylase mnmA [Oxalobacter formigenes
HOxBLS]
gi|229378257|gb|EEO28348.1| tRNA-specific 2-thiouridylase mnmA [Oxalobacter formigenes
HOxBLS]
Length = 369
Score = 38.7 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SRKKVVIGMSGGVDSSVSAWLLKEQGYEVIGL 33
>gi|229032046|ref|ZP_04188029.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH1271]
gi|228729291|gb|EEL80285.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH1271]
Length = 376
Score = 38.7 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|229175070|ref|ZP_04302588.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus MM3]
gi|228608438|gb|EEK65742.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus MM3]
Length = 376
Score = 38.7 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|313124956|ref|YP_004035220.1| argininosuccinate synthase [Halogeometricum borinquense DSM
11551]
gi|312291321|gb|ADQ65781.1| argininosuccinate synthase [Halogeometricum borinquense DSM
11551]
Length = 411
Score = 38.7 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 10 SALLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMP 65
+++ L FSGG D++ C+S + +D V ++ D GQ ++ E + +
Sbjct: 2 TSVALAFSGGLDTTVCVSLLQEEYGYDEVVGVTVDVGQPESEFEEAKETADAHGLDIHVV 61
Query: 66 KWKDSLGE 73
KD E
Sbjct: 62 DAKDEFAE 69
>gi|183599450|ref|ZP_02960943.1| hypothetical protein PROSTU_02929 [Providencia stuartii ATCC 25827]
gi|188021697|gb|EDU59737.1| hypothetical protein PROSTU_02929 [Providencia stuartii ATCC 25827]
Length = 367
Score = 38.7 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 44/150 (29%), Gaps = 38/150 (25%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+D +K ++ SGG DSS + +V L + + + C
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVVGLFMK---NWEEDDDEEYCSAATD 55
Query: 61 VELMPKWKDSLGE----------------DHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
+ D LG +H L G + + N +K +
Sbjct: 56 LADAQSVCDKLGIELHTINFAAEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKA---- 111
Query: 105 NTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 112 ----------FLEFA---AEDLGADYIATG 128
>gi|159028008|emb|CAO87968.1| trmU [Microcystis aeruginosa PCC 7806]
Length = 352
Score = 38.7 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + + V L+
Sbjct: 3 KVVVGLSGGVDSSVAAAALHAQGYDVIGLT 32
>gi|332981931|ref|YP_004463372.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mahella australiensis 50-1 BON]
gi|332699609|gb|AEE96550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mahella australiensis 50-1 BON]
Length = 360
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + V ++
Sbjct: 3 KNRVVVGMSGGVDSSVTAYLLKQQGYDVIGVT 34
>gi|325299477|ref|YP_004259394.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides salanitronis DSM
18170]
gi|324319030|gb|ADY36921.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides salanitronis DSM
18170]
Length = 356
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----GQRNKVELECRLCVRKKIV 61
+K LL SGG DSS D V ++F + G ++ LC R I
Sbjct: 4 EKDKRVLLGMSGGTDSSVAAILLQDAGYEVTGVTFRFYEKEGDTAYLDDARELCSRLHIP 63
Query: 62 ELMPKWKDSLGEDHI 76
++ ++ + I
Sbjct: 64 HIVYDVREVFRKHII 78
>gi|323705926|ref|ZP_08117497.1| NAD+ synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534724|gb|EGB24504.1| NAD+ synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 545
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 13/139 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE---LECRLCVRKKIVELMP 65
A++ SGG DS+ + A+ R L R E + R + +E
Sbjct: 290 KKAVVGLSGGIDSAVTCALAVKALGRENVLGVSMPSRYSSEGSKDDARDLAQNLNIEYRV 349
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ + + +I G+I +N+ +I+ N L F+ R ++
Sbjct: 350 IPIEDVFKSYISIFNKDGNIVGDLAEENLQARIRGNYL--MFISNREGHMVLT------T 401
Query: 126 LGITNIVIGVC--ETDYSG 142
+ I +G C D SG
Sbjct: 402 GNKSEIAVGYCTLYGDMSG 420
>gi|301053781|ref|YP_003791992.1| asparagine synthase [Bacillus anthracis CI]
gi|300375950|gb|ADK04854.1| asparagine synthase [Bacillus cereus biovar anthracis str. CI]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|289522462|ref|ZP_06439316.1| argininosuccinate synthase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504298|gb|EFD25462.1| argininosuccinate synthase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 419
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+L +SGG D+S + W +D+ V T + D GQ
Sbjct: 5 KVVLAYSGGLDTSVAIKWLMDQGYDVVTFTADVGQ 39
>gi|254760114|ref|ZP_05212138.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. Australia 94]
Length = 545
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 175 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 233
>gi|254737278|ref|ZP_05194982.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. Western North America USA6153]
Length = 630
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|228908013|ref|ZP_04071862.1| Asparagine synthetase [Bacillus thuringiensis IBL 200]
gi|228851610|gb|EEM96415.1| Asparagine synthetase [Bacillus thuringiensis IBL 200]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|228965223|ref|ZP_04126317.1| Asparagine synthetase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794457|gb|EEM41969.1| Asparagine synthetase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|228985341|ref|ZP_04145501.1| Asparagine synthetase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228774397|gb|EEM22803.1| Asparagine synthetase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|229096748|ref|ZP_04227718.1| Asparagine synthetase [Bacillus cereus Rock3-29]
gi|229102849|ref|ZP_04233543.1| Asparagine synthetase [Bacillus cereus Rock3-28]
gi|229115728|ref|ZP_04245131.1| Asparagine synthetase [Bacillus cereus Rock1-3]
gi|228667713|gb|EEL23152.1| Asparagine synthetase [Bacillus cereus Rock1-3]
gi|228680522|gb|EEL34705.1| Asparagine synthetase [Bacillus cereus Rock3-28]
gi|228686590|gb|EEL40498.1| Asparagine synthetase [Bacillus cereus Rock3-29]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|229161228|ref|ZP_04289215.1| Asparagine synthetase [Bacillus cereus R309803]
gi|228622324|gb|EEK79163.1| Asparagine synthetase [Bacillus cereus R309803]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|222095848|ref|YP_002529905.1| asparagine synthase [Bacillus cereus Q1]
gi|221239906|gb|ACM12616.1| asparagine synthase [Bacillus cereus Q1]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|190565648|ref|ZP_03018568.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
Tsiankovskii-I]
gi|190563675|gb|EDV17640.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
Tsiankovskii-I]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|196046932|ref|ZP_03114153.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
03BB108]
gi|196022307|gb|EDX60993.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
03BB108]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|196039995|ref|ZP_03107298.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
NVH0597-99]
gi|196029254|gb|EDX67858.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
NVH0597-99]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|218897219|ref|YP_002445630.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
G9842]
gi|228900842|ref|ZP_04065057.1| Asparagine synthetase [Bacillus thuringiensis IBL 4222]
gi|218541280|gb|ACK93674.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
G9842]
gi|228858768|gb|EEN03213.1| Asparagine synthetase [Bacillus thuringiensis IBL 4222]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|167946028|ref|ZP_02533102.1| argininosuccinate synthase [Endoriftia persephone
'Hot96_1+Hot96_2']
gi|110589130|gb|ABG77074.1| argininosuccinate synthase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 166
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPK 66
+L +SGG D+S + W D + V T + D GQ +VE I E+ +
Sbjct: 7 KKVVLAYSGGLDTSIIVKWLQDEYQCEVVTFTADIGQGEEVEPARAKAEAAGIKEIYIED 66
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D + P+ I ++
Sbjct: 67 LREEFVRDFVFPMFRANAIYEGEYLLGTSIA 97
>gi|84489405|ref|YP_447637.1| hypothetical protein Msp_0596 [Methanosphaera stadtmanae DSM
3091]
gi|84372724|gb|ABC56994.1| predicted subunit of tRNA methyltransferase [Methanosphaera
stadtmanae DSM 3091]
Length = 196
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A +L+SGG+DSS VE ++ ++G
Sbjct: 2 KAAVLYSGGKDSSLMAVILDRLGYDVELITINFG 35
>gi|42781344|ref|NP_978591.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus ATCC
10987]
gi|42737266|gb|AAS41199.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus ATCC
10987]
Length = 605
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 235 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 293
>gi|75763674|ref|ZP_00743357.1| Asparagine synthetase (glutamine-hydrolyzing) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74488841|gb|EAO52374.1| Asparagine synthetase (glutamine-hydrolyzing) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 595
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 228 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 286
>gi|30262264|ref|NP_844641.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. Ames]
gi|47527548|ref|YP_018897.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. 'Ames Ancestor']
gi|47565607|ref|ZP_00236647.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus cereus G9241]
gi|49185106|ref|YP_028358.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. Sterne]
gi|49477576|ref|YP_036364.1| asparagine synthase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52143206|ref|YP_083625.1| asparagine synthase [Bacillus cereus E33L]
gi|65319555|ref|ZP_00392514.1| COG0367: Asparagine synthase (glutamine-hydrolyzing) [Bacillus
anthracis str. A2012]
gi|118477681|ref|YP_894832.1| asparagine synthase [Bacillus thuringiensis str. Al Hakam]
gi|165870479|ref|ZP_02215133.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0488]
gi|167632925|ref|ZP_02391251.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0442]
gi|170687008|ref|ZP_02878227.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0465]
gi|170706674|ref|ZP_02897133.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0389]
gi|177649230|ref|ZP_02932232.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0174]
gi|196033797|ref|ZP_03101208.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus W]
gi|206971613|ref|ZP_03232563.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
AH1134]
gi|217959762|ref|YP_002338314.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
AH187]
gi|218231565|ref|YP_002366950.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
B4264]
gi|218903392|ref|YP_002451226.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
AH820]
gi|225864230|ref|YP_002749608.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
03BB102]
gi|227814934|ref|YP_002814943.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. CDC 684]
gi|228914852|ref|ZP_04078459.1| Asparagine synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228920963|ref|ZP_04084300.1| Asparagine synthetase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228927318|ref|ZP_04090378.1| Asparagine synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228933557|ref|ZP_04096407.1| Asparagine synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228945871|ref|ZP_04108214.1| Asparagine synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228952591|ref|ZP_04114667.1| Asparagine synthetase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228958519|ref|ZP_04120239.1| Asparagine synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229043995|ref|ZP_04191685.1| Asparagine synthetase [Bacillus cereus AH676]
gi|229069779|ref|ZP_04203062.1| Asparagine synthetase [Bacillus cereus F65185]
gi|229079420|ref|ZP_04211961.1| Asparagine synthetase [Bacillus cereus Rock4-2]
gi|229091243|ref|ZP_04222462.1| Asparagine synthetase [Bacillus cereus Rock3-42]
gi|229109692|ref|ZP_04239278.1| Asparagine synthetase [Bacillus cereus Rock1-15]
gi|229121805|ref|ZP_04251025.1| Asparagine synthetase [Bacillus cereus 95/8201]
gi|229127649|ref|ZP_04256638.1| Asparagine synthetase [Bacillus cereus BDRD-Cer4]
gi|229138955|ref|ZP_04267533.1| Asparagine synthetase [Bacillus cereus BDRD-ST26]
gi|229144845|ref|ZP_04273242.1| Asparagine synthetase [Bacillus cereus BDRD-ST24]
gi|229150475|ref|ZP_04278691.1| Asparagine synthetase [Bacillus cereus m1550]
gi|229155836|ref|ZP_04283938.1| Asparagine synthetase [Bacillus cereus ATCC 4342]
gi|229178619|ref|ZP_04305983.1| Asparagine synthetase [Bacillus cereus 172560W]
gi|229184479|ref|ZP_04311683.1| Asparagine synthetase [Bacillus cereus BGSC 6E1]
gi|229190335|ref|ZP_04317336.1| Asparagine synthetase [Bacillus cereus ATCC 10876]
gi|229196476|ref|ZP_04323220.1| Asparagine synthetase [Bacillus cereus m1293]
gi|229604667|ref|YP_002866604.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0248]
gi|254684832|ref|ZP_05148692.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. CNEVA-9066]
gi|254722240|ref|ZP_05184028.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A1055]
gi|254743535|ref|ZP_05201220.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. Kruger B]
gi|254751594|ref|ZP_05203631.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. Vollum]
gi|296502816|ref|YP_003664516.1| asparagine synthetase [Bacillus thuringiensis BMB171]
gi|30256895|gb|AAP26127.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. Ames]
gi|47502696|gb|AAT31372.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. 'Ames Ancestor']
gi|47557243|gb|EAL15571.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus cereus G9241]
gi|49179033|gb|AAT54409.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. Sterne]
gi|49329132|gb|AAT59778.1| asparagine synthase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51976675|gb|AAU18225.1| asparagine synthase [Bacillus cereus E33L]
gi|118416906|gb|ABK85325.1| asparagine synthase [Bacillus thuringiensis str. Al Hakam]
gi|164713634|gb|EDR19157.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0488]
gi|167531737|gb|EDR94402.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0442]
gi|170128405|gb|EDS97273.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0389]
gi|170669059|gb|EDT19803.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0465]
gi|172084304|gb|EDT69362.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0174]
gi|195993477|gb|EDX57434.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus W]
gi|206733598|gb|EDZ50770.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
AH1134]
gi|217063627|gb|ACJ77877.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
AH187]
gi|218159522|gb|ACK59514.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
B4264]
gi|218538771|gb|ACK91169.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
AH820]
gi|225787390|gb|ACO27607.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
03BB102]
gi|227006390|gb|ACP16133.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. CDC 684]
gi|228586832|gb|EEK44906.1| Asparagine synthetase [Bacillus cereus m1293]
gi|228593119|gb|EEK50937.1| Asparagine synthetase [Bacillus cereus ATCC 10876]
gi|228598979|gb|EEK56595.1| Asparagine synthetase [Bacillus cereus BGSC 6E1]
gi|228604777|gb|EEK62234.1| Asparagine synthetase [Bacillus cereus 172560W]
gi|228627634|gb|EEK84359.1| Asparagine synthetase [Bacillus cereus ATCC 4342]
gi|228632968|gb|EEK89581.1| Asparagine synthetase [Bacillus cereus m1550]
gi|228638567|gb|EEK95000.1| Asparagine synthetase [Bacillus cereus BDRD-ST24]
gi|228644495|gb|EEL00749.1| Asparagine synthetase [Bacillus cereus BDRD-ST26]
gi|228655726|gb|EEL11575.1| Asparagine synthetase [Bacillus cereus BDRD-Cer4]
gi|228661594|gb|EEL17214.1| Asparagine synthetase [Bacillus cereus 95/8201]
gi|228673733|gb|EEL28991.1| Asparagine synthetase [Bacillus cereus Rock1-15]
gi|228692097|gb|EEL45837.1| Asparagine synthetase [Bacillus cereus Rock3-42]
gi|228703877|gb|EEL56322.1| Asparagine synthetase [Bacillus cereus Rock4-2]
gi|228713314|gb|EEL65206.1| Asparagine synthetase [Bacillus cereus F65185]
gi|228725340|gb|EEL76607.1| Asparagine synthetase [Bacillus cereus AH676]
gi|228801146|gb|EEM48043.1| Asparagine synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228807057|gb|EEM53600.1| Asparagine synthetase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228813745|gb|EEM60023.1| Asparagine synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228826017|gb|EEM71800.1| Asparagine synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228832330|gb|EEM77907.1| Asparagine synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228838657|gb|EEM83961.1| Asparagine synthetase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228844799|gb|EEM89843.1| Asparagine synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229269075|gb|ACQ50712.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
str. A0248]
gi|296323868|gb|ADH06796.1| asparagine synthetase [Bacillus thuringiensis BMB171]
gi|324326286|gb|ADY21546.1| asparagine synthase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 633
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|325473540|gb|EGC76733.1| tRNA-specific 2-thiouridylase mnmA [Treponema denticola F0402]
Length = 383
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 12/99 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI---VELMPK 66
L+ SGG DS+ +D+ V ++ L + K+ +E K
Sbjct: 19 KVLVGLSGGVDSAVAAKLLIDQGYDVTGVTM-------QLLPKLSGIYKEQTDDIEDAKK 71
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
LG HI+ + + + + + + PN
Sbjct: 72 VAAKLGIKHIV--YDMRETFKAEIIDYFVEEYKQGRTPN 108
>gi|311693416|gb|ADP96289.1| NAD+ synthetase [marine bacterium HP15]
Length = 538
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRK 58
+ K +++L SGG DS+ L+ A+D DRV + F Y +E V
Sbjct: 272 VNKNGFKSVVLGLSGGIDSAVTLAVAVDALGKDRVRAVMMPFRYTSSMSLEDAEAEAVAL 331
Query: 59 KI 60
+
Sbjct: 332 GV 333
>gi|300173029|ref|YP_003772195.1| argininosuccinate synthase [Leuconostoc gasicomitatum LMG 18811]
gi|299887408|emb|CBL91376.1| argininosuccinate synthase [Leuconostoc gasicomitatum LMG 18811]
Length = 408
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+L +SGG D+S + W + + + + GQ + +++ ++
Sbjct: 1 MTEKLVLAYSGGLDTSVAIPWLKGKGYEIIAVVLNVGQ-HGKDMDMIQAKALQVGASQSI 59
Query: 67 WKDSLGE 73
D+ E
Sbjct: 60 VIDAQAE 66
>gi|297544225|ref|YP_003676527.1| PP-loop domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842000|gb|ADH60516.1| PP-loop domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 273
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 52/200 (26%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
+ + + K +AL+ FSGG DS+ A +D R ++ K EL+ + +
Sbjct: 8 LQEYLSKLDNALIAFSGGVDST---FLAKVSYDVLGNRALAVTVTSPIHAKSELKEAVEL 64
Query: 57 RKKIVELMPKWKDSLGEDHIL----PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
KKI G H++ + + + + L + K
Sbjct: 65 AKKI-----------GIPHLVVEFNDILEIEEFRKNPLNRCYICKF-------------- 99
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
+A G I+ G D S + R + + +PL
Sbjct: 100 -NLFSGFKAIAEEKGFKYILEGTNADDVSDF---RP----------GRRALKELGILSPL 145
Query: 173 MW--LKKYETWKLAQDIGGQ 190
+ +KK E L++++G
Sbjct: 146 LECGIKKEEIRILSKEMGLP 165
>gi|229163345|ref|ZP_04291297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus R309803]
gi|228620126|gb|EEK77000.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus R309803]
Length = 372
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + + ++ SGG DSS ++ V +
Sbjct: 1 MMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 38
>gi|150399906|ref|YP_001323673.1| hypothetical protein Mevan_1163 [Methanococcus vannielii SB]
gi|150012609|gb|ABR55061.1| ExsB family protein [Methanococcus vannielii SB]
Length = 200
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A +LFSGG+DSS + ++ ++ ++G
Sbjct: 5 KAHVLFSGGKDSSLSAIILHNLGYEIQLITVNFG 38
>gi|72162988|ref|YP_290645.1| GMP synthase [Thermobifida fusca YX]
gi|91206835|sp|Q47LQ0|GUAA_THEFY RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|71916720|gb|AAZ56622.1| GMP synthase (glutamine-hydrolyzing) [Thermobifida fusca YX]
Length = 528
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 60/202 (29%), Gaps = 41/202 (20%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ A+ SGG DS+ + DR+ + D+G + E V K V
Sbjct: 223 SKRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRQGE---AEQVEKDFVAATGA 279
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ A+ G + K + + F+ +
Sbjct: 280 SLKVVDAQERFLTALAGVTDPETKRKIIGRE-----------------FIRV-----FEQ 317
Query: 127 GITNIVIGVCETDYS--------GYPD-------CRHDTIRAIETAINLGMESHVTVHTP 171
IV E D + YPD I++ L + T+ P
Sbjct: 318 AAREIVAEAGEGDEAVEFLVQGTLYPDVVESGGGNGTANIKSHHNVGGLPDDLQFTLVEP 377
Query: 172 LMWLKKYETWKLAQDIGGQDLV 193
L L K E ++ +++G +
Sbjct: 378 LRELFKDEVRRVGEELGLPAEM 399
>gi|30020338|ref|NP_831969.1| asparagine synthetase [glutamine-hydrolyzing] [Bacillus cereus ATCC
14579]
gi|29895889|gb|AAP09170.1| Asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus ATCC
14579]
Length = 633
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS S A + + T S + QR E++ +K+ S E
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGYSEVDVAKETAEKLGVKNHNVFISAKE 321
>gi|120598593|ref|YP_963167.1| tRNA-specific 2-thiouridylase MnmA [Shewanella sp. W3-18-1]
gi|166235084|sp|A1RIW8|MNMA_SHESW RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|120558686|gb|ABM24613.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella sp. W3-18-1]
Length = 372
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|295399328|ref|ZP_06809310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus thermoglucosidasius C56-YS93]
gi|294978794|gb|EFG54390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus thermoglucosidasius C56-YS93]
Length = 371
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN K ++ SGG DSS + V +
Sbjct: 1 MNKPPKDT-RVVVGMSGGVDSSVAALLLKQQGYDVIGI 37
>gi|312110111|ref|YP_003988427.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. Y4.1MC1]
gi|311215212|gb|ADP73816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. Y4.1MC1]
Length = 371
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN K ++ SGG DSS + V +
Sbjct: 1 MNKPPKDT-RVVVGMSGGVDSSVAALLLKQQGYDVIGI 37
>gi|134103131|ref|YP_001108792.1| GMP synthase [Saccharopolyspora erythraea NRRL 2338]
gi|291003926|ref|ZP_06561899.1| GMP synthase [Saccharopolyspora erythraea NRRL 2338]
gi|133915754|emb|CAM05867.1| GMP synthase glutamine amidotransferase [Saccharopolyspora
erythraea NRRL 2338]
Length = 528
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 35/198 (17%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-----QRNKVELECRLCVRKKIVE 62
A+ SGG DS+ + D++ + D+G +R +VE + ++V
Sbjct: 224 KRAICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRAGERAQVERDFVAATGVRLVT 283
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ + + + I + +D A
Sbjct: 284 IDARDRFLAALAGVTDPEEKRKIIGREFIRVFEQAARDLQ----------------AEAG 327
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWL 175
A I +V G + YPD I++ L + + PL L
Sbjct: 328 AEGEQIDFLVQG------TLYPDVVESGGGSGAANIKSHHNVGGLPEDLQFDLVEPLRAL 381
Query: 176 KKYETWKLAQDIGGQDLV 193
K E ++ ++G + +
Sbjct: 382 FKDEVRRVGLELGLPETI 399
>gi|118602200|ref|YP_903415.1| argininosuccinate synthase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166989396|sp|A1AVI7|ASSY_RUTMC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|118567139|gb|ABL01944.1| argininosuccinate synthase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 403
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
MN I K +L +SGG D+S + W D + V T + D GQ +VEL
Sbjct: 1 MNKINIK--KVVLAYSGGLDTSIIVKWLQDTYRCEVVTFTADIGQGEEVELARTKAKAAG 58
Query: 60 IVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ E + ++ D + P+ I ++
Sbjct: 59 VKEVYIENLREEFVRDFVFPMFRANAIYEGEYLLGTSIA 97
>gi|27379100|ref|NP_770629.1| GMP synthase [Bradyrhizobium japonicum USDA 110]
gi|44887956|sp|Q89N53|GUAA_BRAJA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|27352250|dbj|BAC49254.1| GMP synthase [Bradyrhizobium japonicum USDA 110]
Length = 551
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 31/191 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + D++ + D+G RL +++V+L
Sbjct: 255 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHG-------LMRLNEAEQVVDLFRHHY 307
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-G 127
+ LG++ + + I GR +F+ A ++ G
Sbjct: 308 NIPLVHVDASKQFLGELEGVTDPETKRKTI-----------GR--LFIEVFEAEAKKIGG 354
Query: 128 ITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ G D ++G P TI++ L ++ + PL L K E
Sbjct: 355 ADFLAQGTLYPDVIESVSFTGGP---SVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVR 411
Query: 182 KLAQDIGGQDL 192
KL +++G ++
Sbjct: 412 KLGRELGLPEI 422
>gi|295696590|ref|YP_003589828.1| protein of unknown function DUF224 cysteine-rich region domain
protein [Bacillus tusciae DSM 2912]
gi|295412192|gb|ADG06684.1| protein of unknown function DUF224 cysteine-rich region domain
protein [Bacillus tusciae DSM 2912]
Length = 602
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 31/135 (22%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFD---YGQRNKVELECRLCVRKKIVELM 64
++ FSGG DS+ L AL+ DRV ++ D Y +R + E
Sbjct: 484 RVVIAFSGGVDSTFLLKAALEALGPDRVLAVTADSETYPERERWE--------------A 529
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ LG H+L A +I + L + +P LA
Sbjct: 530 VELARELGSPHLLIQARELEIPGYAENPADRCYFCKQELFSHLIP------------LAK 577
Query: 125 RLGITNIVIGVCETD 139
+ G +++ G D
Sbjct: 578 QKGYDHVIFGAIADD 592
>gi|294010267|ref|YP_003543727.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Sphingobium japonicum UT26S]
gi|292673597|dbj|BAI95115.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Sphingobium japonicum UT26S]
Length = 373
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 35/128 (27%), Gaps = 4/128 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
A ++ SGG DSS + A ++ Y V C + I +
Sbjct: 18 ARRIVVAMSGGVDSSVVAALAARTGAETIGVTLQLYDHGAAVGRTGSCCAGQDIRDARAV 77
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ S+ + A + P V + +A L
Sbjct: 78 ADRIGIAHYVFD---YESRFRDSVIADFADEYMAGRTPIPCVKCNMGVKFTDLFQIARDL 134
Query: 127 GITNIVIG 134
G + G
Sbjct: 135 GADCLATG 142
>gi|291276778|ref|YP_003516550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter mustelae 12198]
gi|290963972|emb|CBG39811.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Helicobacter mustelae 12198]
Length = 342
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 38/127 (29%), Gaps = 20/127 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKWKDS 70
LL SGG DSS + V+ Y + + E + L K+ + +
Sbjct: 5 LLMSGGVDSSYSAYLLKKQGYEVKGF---YLKLHDKEEKHQVFLKNCHKVAQNLQIDFQV 61
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR--NIIF-LVFAATLAYRLG 127
+ + + + Q PN P N + A +A + G
Sbjct: 62 IEAKEEFRQKVYNEFVN---------AYQRGETPN---PCALCNPLMKFGLALDIALQQG 109
Query: 128 ITNIVIG 134
I G
Sbjct: 110 CERIATG 116
>gi|254994811|ref|ZP_05277001.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
[Anaplasma marginale str. Mississippi]
Length = 379
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 15/131 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ ++ SGG DSS + +R +V + + C I +
Sbjct: 22 TVVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVAST 81
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATLA 123
++L ++ + + + P N V R+++ A
Sbjct: 82 LGFPHYVLD---YEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDML------KAA 132
Query: 124 YRLGITNIVIG 134
+G + G
Sbjct: 133 RAIGGDVVATG 143
>gi|229892363|gb|ACQ89825.1| MIP06849p [Drosophila melanogaster]
Length = 283
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG 43
LLL SGG DSS C + ++ + D G
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPHQIIAVHVDNG 265
>gi|212634687|ref|YP_002311212.1| tRNA-specific 2-thiouridylase MnmA [Shewanella piezotolerans WP3]
gi|226704776|sp|B8CLH4|MNMA_SHEPW RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|212556171|gb|ACJ28625.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella piezotolerans WP3]
Length = 371
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
D ++ SGG DSS + + +VE L
Sbjct: 5 DPTHLGKKVIVGMSGGVDSSVSAYLLMKQGYQVEGL 40
>gi|319426629|gb|ADV54703.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella putrefaciens 200]
Length = 372
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|94676746|ref|YP_588863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|166991122|sp|Q1LT51|MNMA_BAUCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|94219896|gb|ABF14055.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 368
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 48/141 (34%), Gaps = 21/141 (14%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN I KK ++ SGG DSS L + VE L + + E V K +
Sbjct: 1 MNIINKK---VIVGMSGGVDSSVSALLLLQQGYTVEGLFMK--NWEEDDHEQYCTVAKDL 55
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI--- 113
+ H + + + +A + Q PN P +NI
Sbjct: 56 ADAQAVCNQLGIILHKVN--FAAEYWDNVFEYFLA-EYQVGRTPN---PDILCNKNIKFK 109
Query: 114 IFLVFAATLAYRLGITNIVIG 134
+FL FA LG I G
Sbjct: 110 VFLDFAT---QNLGADYIATG 127
>gi|146293329|ref|YP_001183753.1| tRNA-specific 2-thiouridylase MnmA [Shewanella putrefaciens
CN-32]
gi|166235082|sp|A4Y7M1|MNMA_SHEPC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|145565019|gb|ABP75954.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella putrefaciens CN-32]
Length = 372
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|296332078|ref|ZP_06874542.1| argininosuccinate synthase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675527|ref|YP_003867199.1| argininosuccinate synthase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296150849|gb|EFG91734.1| argininosuccinate synthase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305413771|gb|ADM38890.1| argininosuccinate synthase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 403
Score = 38.3 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W ++ V D G
Sbjct: 1 MSEQKKVVLAYSGGLDTSVAIKWLQEQGYNVIACCLDVG 39
>gi|255655293|ref|ZP_05400702.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile QCD-23m63]
Length = 359
Score = 38.3 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + V ++
Sbjct: 1 MNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVT 33
>gi|254974826|ref|ZP_05271298.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile QCD-66c26]
gi|255092214|ref|ZP_05321692.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile CIP 107932]
gi|255100299|ref|ZP_05329276.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile QCD-63q42]
gi|255306238|ref|ZP_05350410.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile ATCC 43255]
gi|255313953|ref|ZP_05355536.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile QCD-76w55]
gi|255516633|ref|ZP_05384309.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile QCD-97b34]
gi|255649732|ref|ZP_05396634.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile QCD-37x79]
gi|260682888|ref|YP_003214173.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile CD196]
gi|260686486|ref|YP_003217619.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile R20291]
gi|260209051|emb|CBA62172.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile CD196]
gi|260212502|emb|CBE03431.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium difficile R20291]
Length = 359
Score = 38.3 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + V ++
Sbjct: 1 MNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVT 33
>gi|162138526|ref|YP_483713.2| argininosuccinate synthase [Rhodopseudomonas palustris HaA2]
Length = 445
Score = 38.3 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
M+ I+K K + + FSGG D+S L W + RV + + GQ
Sbjct: 1 MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQ 47
>gi|51246817|ref|YP_066701.1| hypothetical protein DP2965 [Desulfotalea psychrophila LSv54]
gi|50877854|emb|CAG37694.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 360
Score = 38.3 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
K+ AL LFSGG DS +++ + + F
Sbjct: 2 KSIKALSLFSGGLDSILAARLIMEQGIELIAVQF 35
>gi|329957022|ref|ZP_08297590.1| GMP synthase domain protein [Bacteroides clarus YIT 12056]
gi|328523779|gb|EGF50871.1| GMP synthase domain protein [Bacteroides clarus YIT 12056]
Length = 435
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
LL SGG DSS + L D + + ++G K E E + + K
Sbjct: 141 RKVLLALSGGVDSSVVAALLLKAIGDNLVCVHVNHGLMRKGESEAVIEIFK 191
>gi|320540371|ref|ZP_08040021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Serratia symbiotica str. Tucson]
gi|320029302|gb|EFW11331.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Serratia symbiotica str. Tucson]
Length = 366
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGISGGVDSSVTAYLLQQQGYQVAGL 36
>gi|303244156|ref|ZP_07330494.1| tRNA methyl transferase-like protein [Methanothermococcus
okinawensis IH1]
gi|302485541|gb|EFL48467.1| tRNA methyl transferase-like protein [Methanothermococcus
okinawensis IH1]
Length = 198
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 8/70 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFD--------YGQRNKVELECRLCVRKKIVELM 64
+LFSGG+DSS E ++ + Y Q L V E++
Sbjct: 6 VLFSGGKDSSLSAILLKKLGYEPELITVNFGILDSYRYAQETAKILALPHNVEYLDQEIL 65
Query: 65 PKWKDSLGED 74
K D + +D
Sbjct: 66 EKSVDIILKD 75
>gi|300723601|ref|YP_003712906.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Xenorhabdus nematophila ATCC 19061]
gi|297630123|emb|CBJ90760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Xenorhabdus nematophila ATCC 19061]
Length = 367
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 83/240 (34%), Gaps = 51/240 (21%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKK 59
M+D +K ++ SGG DSS + +V L +N E + C
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGLFM----KNWEEDDGEEYCSAAD 54
Query: 60 IVELMPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---- 114
+ D LG + H + + + +A + + PN P +I+
Sbjct: 55 DLADAQAVCDKLGIELHTIN--FAAEYWDNVFEHFLA-EYKAGRTPN---P--DILCNKE 106
Query: 115 -----FLVFAATLAYRLGITNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
FL FA A LG I G V D G I + ++ +
Sbjct: 107 IKFKAFLEFA---AEDLGADYIATGHYVRRRDADG--------ISQLLRGLDGNKDQSYF 155
Query: 168 VHT-----------PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY 216
++T P+ L+K E ++A++IG + C++G+R R G
Sbjct: 156 LYTLSHQQIAKSLFPVGELEKPEVRRIAEEIGLITAKKKD--STGICFIGERKFRDFLGR 213
>gi|291279546|ref|YP_003496381.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Deferribacter desulfuricans SSM1]
gi|290754248|dbj|BAI80625.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Deferribacter desulfuricans SSM1]
Length = 346
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS L V ++
Sbjct: 1 MKDKIIVAMSGGVDSSVAAYKMLKEGFDVVGVT 33
>gi|229135219|ref|ZP_04264018.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BDRD-ST196]
gi|228648261|gb|EEL04297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BDRD-ST196]
Length = 376
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|229013614|ref|ZP_04170745.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus mycoides DSM 2048]
gi|229062091|ref|ZP_04199416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH603]
gi|229169139|ref|ZP_04296854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH621]
gi|228614367|gb|EEK71477.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH621]
gi|228717243|gb|EEL68918.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH603]
gi|228747673|gb|EEL97545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus mycoides DSM 2048]
Length = 376
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|161527848|ref|YP_001581674.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
gi|160339149|gb|ABX12236.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
Length = 265
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ A + D ++ DY ++ EL+ + +I
Sbjct: 14 KNKVMIALSGGVDSALVAYAAYQKLGDFAIAVTADYKTLSEEELQTAKQICSEI 67
>gi|16079997|ref|NP_390823.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221310889|ref|ZP_03592736.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221315214|ref|ZP_03597019.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221320132|ref|ZP_03601426.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221324414|ref|ZP_03605708.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321312481|ref|YP_004204768.1| argininosuccinate synthase [Bacillus subtilis BSn5]
gi|5915700|sp|O34347|ASSY_BACSU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|2293242|gb|AAC00320.1| arginine succinate synthase [Bacillus subtilis]
gi|2635410|emb|CAB14905.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
str. 168]
gi|291485373|dbj|BAI86448.1| argininosuccinate synthase [Bacillus subtilis subsp. natto
BEST195]
gi|320018755|gb|ADV93741.1| argininosuccinate synthase [Bacillus subtilis BSn5]
Length = 403
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W ++ V D G
Sbjct: 1 MSEQKKVVLAYSGGLDTSVAIKWLQEQGYNVIACCLDVG 39
>gi|148265774|ref|YP_001232480.1| NAD synthetase [Geobacter uraniireducens Rf4]
gi|189030449|sp|A5G7Y9|NADE_GEOUR RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|146399274|gb|ABQ27907.1| NH(3)-dependent NAD(+) synthetase [Geobacter uraniireducens Rf4]
Length = 273
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDY------GQRNKVELECRLCVRKKI 60
A+L SGG DS+ A + + V + Y + + + RL + ++
Sbjct: 29 QKAVLGLSGGIDSALVAYLAAEALGPENVYACTMPYRTSNPESEAHARLVAERLGINYRV 88
Query: 61 VELMP 65
+E+ P
Sbjct: 89 IEITP 93
>gi|167824128|ref|ZP_02455599.1| argininosuccinate synthase [Burkholderia pseudomallei 9]
gi|167910874|ref|ZP_02497965.1| argininosuccinate synthase [Burkholderia pseudomallei 112]
gi|226197489|ref|ZP_03793066.1| argininosuccinate synthase [Burkholderia pseudomallei Pakistan 9]
gi|254297620|ref|ZP_04965073.1| argininosuccinate synthase [Burkholderia pseudomallei 406e]
gi|157807086|gb|EDO84256.1| argininosuccinate synthase [Burkholderia pseudomallei 406e]
gi|225930868|gb|EEH26878.1| argininosuccinate synthase [Burkholderia pseudomallei Pakistan 9]
Length = 404
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K LL +SGG D+ST L + FD RV + GQ+ E R EL+
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELV 60
>gi|260642609|ref|ZP_05416575.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides finegoldii DSM 17565]
gi|260621349|gb|EEX44220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides finegoldii DSM 17565]
Length = 365
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 38/192 (19%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVE 62
+I++ LL SGG DSS L+ V ++F Y + E +E
Sbjct: 1 MIEENRRVLLGMSGGTDSSVAAMRLLEGGYEVTGITFRFYELNDSTEY----------LE 50
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP---GRNIIFLVFA 119
+ LG HI D+ + + + + P VP N +
Sbjct: 51 DARSLAERLGIRHI--TYDARDVFRKQIIEYFVQEYMEGRTP---VPCTLCNNCLKWPLL 105
Query: 120 ATLAYRLGITNIVIGV----CETDYSGY------PDCRHDTIRAIETAINLGMESHV--T 167
A +A +GI I G E + + Y PD G++ +
Sbjct: 106 AKVADEMGIFYIATGHYVQKVELEGTYYITHAADPDKDQSFF-------LWGLKQDILRR 158
Query: 168 VHTPLMWLKKYE 179
+ P+ + K E
Sbjct: 159 ILLPMGNITKVE 170
>gi|203288361|ref|YP_002223411.1| GMP synthase (glutamine-hydrolysing) (glutamine amidotransferase)
[Borrelia recurrentis A1]
gi|201085581|gb|ACH95154.1| GMP synthase (glutamine-hydrolysing) (glutamine amidotransferase)
[Borrelia recurrentis A1]
Length = 513
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 64/192 (33%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L SGG DS C L D + + D G R I+E K+
Sbjct: 217 KVILGLSGGIDSLVCALLINKAIKDNLICVFVDTG-------FLRKNEANGILEFNKKY- 268
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+L HI + ++L + + + TFV IF A I
Sbjct: 269 -NLNIKHI----DSSLLFLTNLRDVDDPEEKRKIIGKTFVE----IFEKVAL---EEDDI 316
Query: 129 TNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ G +D D C I++ L + ++ + PL L K E +L
Sbjct: 317 KYLAQGTIYSD-VIESDVKNNVCSSTNIKSHHNVGGLPDKINLNLLEPLRNLFKDEVIQL 375
Query: 184 AQDIGGQDLVNL 195
+G ++ V
Sbjct: 376 GVQLGLEEEVLY 387
>gi|167845666|ref|ZP_02471174.1| argininosuccinate synthase [Burkholderia pseudomallei B7210]
Length = 404
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K LL +SGG D+ST L + FD RV + GQ+ E R EL+
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELV 60
>gi|167719548|ref|ZP_02402784.1| argininosuccinate synthase [Burkholderia pseudomallei DM98]
Length = 404
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K LL +SGG D+ST L + FD RV + GQ+ E R EL+
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELV 60
>gi|222054594|ref|YP_002536956.1| NAD+ synthetase [Geobacter sp. FRC-32]
gi|221563883|gb|ACM19855.1| NAD+ synthetase [Geobacter sp. FRC-32]
Length = 274
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 23/72 (31%), Gaps = 6/72 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ A + + V + Y R + I E +
Sbjct: 30 RRAVLGLSGGIDSALVAYLAAEALGAENVYACTMPY--RTSNPESEAH--ARLIAEDLGI 85
Query: 67 WKDSLGEDHILP 78
+ ++
Sbjct: 86 NYQVIEITPMID 97
>gi|90020884|ref|YP_526711.1| GntR family transcriptional regulator [Saccharophagus degradans
2-40]
gi|89950484|gb|ABD80499.1| transcriptional regulator, GntR family [Saccharophagus degradans
2-40]
Length = 429
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ FSGG DS+ L + + ++G
Sbjct: 23 VAFSGGLDSTVLLHALSVLGVKCHAVHVNHG 53
>gi|90022068|ref|YP_527895.1| argininosuccinate synthase [Saccharophagus degradans 2-40]
gi|119361319|sp|Q21HZ6|ASSY_SACD2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|89951668|gb|ABD81683.1| argininosuccinate synthase [Saccharophagus degradans 2-40]
Length = 409
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+L +SGG D+S + W + + V T + D GQ +VE +
Sbjct: 2 STNSSIKKVVLAYSGGLDTSVIVKWLQETYNCEVVTFTADIGQGEEVEPARAKAEALGVK 61
Query: 62 EL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
E+ + ++ D++ P+ I ++
Sbjct: 62 EIYIDDLREEFVRDYVFPMFRANTIYEGEYLLGTSIA 98
>gi|56420500|ref|YP_147818.1| hypothetical protein GK1965 [Geobacillus kaustophilus HTA426]
gi|297529858|ref|YP_003671133.1| asparagine synthase [Geobacillus sp. C56-T3]
gi|56380342|dbj|BAD76250.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|297253110|gb|ADI26556.1| asparagine synthase [Geobacillus sp. C56-T3]
Length = 274
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 12/75 (16%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
I+K + L+ FSGG DS+ L+ A + D+V ++ + V
Sbjct: 14 HILKGMGNVLVAFSGGVDSTFLLAMAKEVLGDQVLAVT-----------AVSETFPTREV 62
Query: 62 ELMPKWKDSLGEDHI 76
+ K + +G HI
Sbjct: 63 QHATKLAEQIGVKHI 77
>gi|167738526|ref|ZP_02411300.1| argininosuccinate synthase [Burkholderia pseudomallei 14]
gi|217421838|ref|ZP_03453342.1| argininosuccinate synthase [Burkholderia pseudomallei 576]
gi|254188831|ref|ZP_04895342.1| argininosuccinate synthase [Burkholderia pseudomallei Pasteur
52237]
gi|157936510|gb|EDO92180.1| argininosuccinate synthase [Burkholderia pseudomallei Pasteur
52237]
gi|217395580|gb|EEC35598.1| argininosuccinate synthase [Burkholderia pseudomallei 576]
Length = 404
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K LL +SGG D+ST L + FD RV + GQ+ E R EL+
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELV 60
>gi|117927016|ref|YP_867633.1| argininosuccinate synthase [Magnetococcus sp. MC-1]
gi|166989393|sp|A0LE34|ASSY_MAGSM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|117610772|gb|ABK46227.1| argininosuccinate synthase [Magnetococcus sp. MC-1]
Length = 407
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S L W D + V D GQ ELE +K + +
Sbjct: 6 DKVVLAYSGGLDTSIILKWLQDEYQCEVVAFCADLGQ--AEELEPARAKAEKFG-VKEIY 62
Query: 68 KDSLGEDHILP 78
D L E+ +
Sbjct: 63 IDDLKEEFVRD 73
>gi|327314588|ref|YP_004330025.1| tRNA(Ile)-lysidine synthetase [Prevotella denticola F0289]
gi|326945281|gb|AEA21166.1| tRNA(Ile)-lysidine synthetase [Prevotella denticola F0289]
Length = 456
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 24/130 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L + R+E + ++ R + + ++ L
Sbjct: 22 LVALSGGADSVCLLLCLKELGYRIEAVHCNFHLRGEE------------SQRDEQYCQEL 69
Query: 72 GEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+PL + + + V++++ +L + F L
Sbjct: 70 CVRENIPLHKAHFDTKTYAAQHKVSIEMAARSLRYRY-------FFQLK----ETLAADA 118
Query: 131 IVIGVCETDY 140
+ G + D
Sbjct: 119 VCTGHHKEDS 128
>gi|325856881|ref|ZP_08172379.1| tRNA(Ile)-lysidine synthetase [Prevotella denticola CRIS 18C-A]
gi|325483254|gb|EGC86231.1| tRNA(Ile)-lysidine synthetase [Prevotella denticola CRIS 18C-A]
Length = 456
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 24/130 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L + R+E + ++ R + + ++ L
Sbjct: 22 LVALSGGADSVCLLLCLKELGYRIEAVHCNFHLRGEE------------SQRDEQYCQEL 69
Query: 72 GEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+PL + + + V++++ +L + F L
Sbjct: 70 CVRENIPLHKAHFDTKTYAAQHKVSIEMAARSLRYRY-------FFQLK----ETLAADA 118
Query: 131 IVIGVCETDY 140
+ G + D
Sbjct: 119 VCTGHHKEDS 128
>gi|242398524|ref|YP_002993948.1| predicted ATPase, PP-loop superfamily [Thermococcus sibiricus MM
739]
gi|242264917|gb|ACS89599.1| predicted ATPase, PP-loop superfamily [Thermococcus sibiricus MM
739]
Length = 203
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKD 69
L+SGG+DSS V+ ++ ++G + E L ++ L K +
Sbjct: 6 LYSGGKDSSLAAYILKRLGYEVKLVTVNFGVLDSWKYARETAQSLGFEHEVRFLDRKILE 65
Query: 70 SLGEDHILPLAILGDI 85
E I I
Sbjct: 66 KATEMCIKDNHPNNAI 81
>gi|90421559|ref|YP_529929.1| argininosuccinate synthase [Rhodopseudomonas palustris BisB18]
gi|122477786|sp|Q21DC6|ASSY_RHOPB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|90103573|gb|ABD85610.1| argininosuccinate synthase [Rhodopseudomonas palustris BisB18]
Length = 445
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
M+ I+K K + + FSGG D+S L W + RV + + GQ
Sbjct: 1 MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQ 47
>gi|327459726|gb|EGF06066.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1057]
Length = 404
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS AL R +E + F KK +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVDIEVVHF------ASPPYTSPGALKKAQDLTRKLTK 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K + L T R + + + G
Sbjct: 233 FGGNIQFIEVPF------TEIQEEIKAKAPEAYLMTLT----R-RFMMRITDQIREKRGA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + TI +++ AIN + V P++ + K E ++A+ I
Sbjct: 282 QVIINGESLGQVAS------QTIESMQ-AINAVTNTP--VIRPVVTMDKLEIIEIAEKID 332
Query: 189 GQDLVNLILEES 200
+ E+
Sbjct: 333 TFQISIQPFEDC 344
>gi|304409068|ref|ZP_07390689.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella baltica OS183]
gi|307303071|ref|ZP_07582826.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella baltica BA175]
gi|304352889|gb|EFM17286.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella baltica OS183]
gi|306913431|gb|EFN43853.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella baltica BA175]
Length = 372
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|300214168|gb|ADJ78584.1| Argininosuccinate synthase(Citrulline--aspartate ligase)
[Lactobacillus salivarius CECT 5713]
Length = 403
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMP 65
+ +L +SGG D+S ++W ++ V D G+ +E ++ VE ++
Sbjct: 2 EKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVGEGKDLEAIKEKGLKVGAVESIVI 61
Query: 66 KWKDSLGEDHILP 78
K E+++LP
Sbjct: 62 DAKHEFAEEYVLP 74
>gi|289450302|ref|YP_003475437.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289184849|gb|ADC91274.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 1019
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFD 41
MN + +K +L+ GG+DS+ L++ R L+ +
Sbjct: 152 MNKLEEKNVREVLVPVGGGKDSAVSLAFLKAAGYRCHALAIN 193
>gi|229017568|ref|ZP_04174463.1| Asparagine synthetase [Bacillus cereus AH1273]
gi|229023785|ref|ZP_04180270.1| Asparagine synthetase [Bacillus cereus AH1272]
gi|228737470|gb|EEL87980.1| Asparagine synthetase [Bacillus cereus AH1272]
gi|228743711|gb|EEL93816.1| Asparagine synthetase [Bacillus cereus AH1273]
Length = 633
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DSS S A + + T S + QR E++ +K+
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSIGFEQRGFSEVDVAKETAEKL 308
>gi|222112576|ref|YP_002554840.1| tRNA-specific 2-thiouridylase mnma [Acidovorax ebreus TPSY]
gi|254811451|sp|B9MIA2|MNMA_DIAST RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|221732020|gb|ACM34840.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidovorax ebreus TPSY]
Length = 370
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 6/31 (19%), Positives = 11/31 (35%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + V +
Sbjct: 3 KHRVVVGLSGGVDSAVTAHLLKQQGHEVVGI 33
>gi|205821998|sp|A9L4G9|MNMA_SHEB9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 372
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|205821993|sp|A6WP69|MNMA_SHEB8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 372
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|217973050|ref|YP_002357801.1| tRNA-specific 2-thiouridylase MnmA [Shewanella baltica OS223]
gi|205821978|sp|A3D5F8|MNMA_SHEB5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|254811460|sp|B8E945|MNMA_SHEB2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|217498185|gb|ACK46378.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella baltica OS223]
Length = 372
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|257075676|ref|ZP_05570037.1| putative ATPase [Ferroplasma acidarmanus fer1]
Length = 209
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A+ LFSGG+DS A+++ + YG
Sbjct: 2 KAVALFSGGKDSFLSAMMAVEQGYEII-----YG 30
>gi|73969262|ref|XP_538325.2| PREDICTED: similar to tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
1 isoform a [Canis familiaris]
Length = 425
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ A + SGG DS+ R +V +
Sbjct: 1 MQAARHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|163940043|ref|YP_001644927.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus
weihenstephanensis KBAB4]
gi|229011526|ref|ZP_04168712.1| Asparagine synthetase [Bacillus mycoides DSM 2048]
gi|229059923|ref|ZP_04197297.1| Asparagine synthetase [Bacillus cereus AH603]
gi|229133082|ref|ZP_04261920.1| Asparagine synthetase [Bacillus cereus BDRD-ST196]
gi|229167090|ref|ZP_04294833.1| Asparagine synthetase [Bacillus cereus AH621]
gi|163862240|gb|ABY43299.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus
weihenstephanensis KBAB4]
gi|228616324|gb|EEK73406.1| Asparagine synthetase [Bacillus cereus AH621]
gi|228650380|gb|EEL06377.1| Asparagine synthetase [Bacillus cereus BDRD-ST196]
gi|228719336|gb|EEL70940.1| Asparagine synthetase [Bacillus cereus AH603]
gi|228749681|gb|EEL99520.1| Asparagine synthetase [Bacillus mycoides DSM 2048]
Length = 633
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DSS S A + + T S + QR E++ +K+
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSIGFEQRGFSEVDVAKETAEKL 308
>gi|119386404|ref|YP_917459.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Paracoccus denitrificans PD1222]
gi|119376999|gb|ABL71763.1| GMP synthase (glutamine-hydrolyzing) [Paracoccus denitrificans
PD1222]
Length = 519
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 29/192 (15%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ + SGG DSS + D++ + D+G RL +++V +
Sbjct: 221 SKRVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHG-------LLRLNEAEEVVTMFRD 273
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ A ++ S+L +++ + F+ +F +A+
Sbjct: 274 NYNIPLIH-----ADESELFLSALEGVSDPEVKRKTIGKLFID----VFQKYAS---EIE 321
Query: 127 GITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
G + G D +SG P TI++ L + + + PL L K E
Sbjct: 322 GAEFLAQGTLYPDVIESVSFSGGP---SVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEV 378
Query: 181 WKLAQDIGGQDL 192
L +++G +
Sbjct: 379 RALGRELGLPEK 390
>gi|53719335|ref|YP_108321.1| putative argininosuccinate synthase [Burkholderia pseudomallei
K96243]
gi|76811104|ref|YP_333547.1| argininosuccinate synthase [Burkholderia pseudomallei 1710b]
gi|126440368|ref|YP_001059031.1| argininosuccinate synthase [Burkholderia pseudomallei 668]
gi|126451449|ref|YP_001066281.1| argininosuccinate synthase [Burkholderia pseudomallei 1106a]
gi|167815748|ref|ZP_02447428.1| argininosuccinate synthase [Burkholderia pseudomallei 91]
gi|167902629|ref|ZP_02489834.1| argininosuccinate synthase [Burkholderia pseudomallei NCTC 13177]
gi|242315613|ref|ZP_04814629.1| argininosuccinate synthase [Burkholderia pseudomallei 1106b]
gi|254179769|ref|ZP_04886368.1| argininosuccinate synthase [Burkholderia pseudomallei 1655]
gi|254198046|ref|ZP_04904468.1| argininosuccinate synthase [Burkholderia pseudomallei S13]
gi|254261265|ref|ZP_04952319.1| argininosuccinate synthase [Burkholderia pseudomallei 1710a]
gi|68566240|sp|Q63U95|ASSY_BURPS RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|52209749|emb|CAH35720.1| putative argininosuccinate synthase [Burkholderia pseudomallei
K96243]
gi|76580557|gb|ABA50032.1| argininosuccinate synthase [Burkholderia pseudomallei 1710b]
gi|126219861|gb|ABN83367.1| argininosuccinate synthase [Burkholderia pseudomallei 668]
gi|126225091|gb|ABN88631.1| argininosuccinate synthase [Burkholderia pseudomallei 1106a]
gi|169654787|gb|EDS87480.1| argininosuccinate synthase [Burkholderia pseudomallei S13]
gi|184210309|gb|EDU07352.1| argininosuccinate synthase [Burkholderia pseudomallei 1655]
gi|242138852|gb|EES25254.1| argininosuccinate synthase [Burkholderia pseudomallei 1106b]
gi|254219954|gb|EET09338.1| argininosuccinate synthase [Burkholderia pseudomallei 1710a]
Length = 404
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K LL +SGG D+ST L + FD RV + GQ+ E R EL+
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELV 60
>gi|320167761|gb|EFW44660.1| asparagine synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 552
Score = 38.3 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 16/79 (20%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVE----------------TLSFDYGQRNKVELECRLCV 56
+L SGG DSS + A +++ SF G +N +LE V
Sbjct: 230 VLLSGGLDSSLVAAIASRHLEQLANNPPANDESHVNWWPRLHSFAIGLKNAPDLEAARVV 289
Query: 57 RKKIVELMPKWKDSLGEDH 75
K + + ++ ++ + H
Sbjct: 290 AKHLNTVHHEFHFTIQDGH 308
>gi|242239492|ref|YP_002987673.1| tRNA-specific 2-thiouridylase MnmA [Dickeya dadantii Ech703]
gi|242131549|gb|ACS85851.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dickeya dadantii Ech703]
Length = 370
Score = 38.3 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVEGL 36
>gi|254514300|ref|ZP_05126361.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
proteobacterium NOR5-3]
gi|219676543|gb|EED32908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
proteobacterium NOR5-3]
Length = 368
Score = 38.3 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 44/135 (32%), Gaps = 15/135 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVEL 63
+ ++ SGG DSS L++ VE L +N E + C K
Sbjct: 1 MAAPQKVIVGMSGGVDSSVAALMLLEQGYHVEGLFM----KNWDEDDGTEYCTAKADFAD 56
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFA 119
D L L A ++ ++ + Q PN P R I F F
Sbjct: 57 AQAVADKLQI--TLHSANFAAEYWDNVFEHFLAEYQSGRTPN---PDILCNREIKFRAF- 110
Query: 120 ATLAYRLGITNIVIG 134
A LG +I G
Sbjct: 111 LDYALELGADSIATG 125
>gi|167894235|ref|ZP_02481637.1| argininosuccinate synthase [Burkholderia pseudomallei 7894]
gi|167918897|ref|ZP_02505988.1| argininosuccinate synthase [Burkholderia pseudomallei BCC215]
gi|237812294|ref|YP_002896745.1| argininosuccinate synthase [Burkholderia pseudomallei MSHR346]
gi|237504054|gb|ACQ96372.1| argininosuccinate synthase [Burkholderia pseudomallei MSHR346]
Length = 404
Score = 38.3 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K LL +SGG D+ST L + FD RV + GQ+ E R EL+
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELV 60
>gi|254669809|emb|CBA04142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis alpha153]
Length = 367
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTANTTNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L +A G I G
Sbjct: 114 LDYAVG----QGADTIATG 128
>gi|296109621|ref|YP_003616570.1| GMP synthase, large subunit [Methanocaldococcus infernus ME]
gi|295434435|gb|ADG13606.1| GMP synthase, large subunit [Methanocaldococcus infernus ME]
Length = 310
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 32/191 (16%)
Query: 9 PSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
A++ SGG DSS D++ + D G K E E E+ +
Sbjct: 22 RKAIIALSGGVDSSVAAVLTHKAIGDKLVAVFVDTGLMRKGERE----------EVERVF 71
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+D LG + I+ A + K+ K + +F+ +A ++
Sbjct: 72 RDQLGLNLIVVDAKERFLEALKGVKDPEEKRKIIGK----------LFIDIFEEIAEKVK 121
Query: 128 ITNIVIGVCETDYSGYPDC--RHDTIRA-IETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+V G PD I++ A+ GM + V PL L K E ++A
Sbjct: 122 AEVLVQGTIA------PDWIETEGKIKSHHNVALPHGMV--LEVVEPLRELYKDEVREVA 173
Query: 185 QDIGGQDLVNL 195
+ +G + +
Sbjct: 174 KALGLPESIVY 184
>gi|227488144|ref|ZP_03918460.1| argininosuccinate synthase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541542|ref|ZP_03971591.1| argininosuccinate synthase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092006|gb|EEI27318.1| argininosuccinate synthase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182698|gb|EEI63670.1| argininosuccinate synthase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 401
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ 44
+L +SGG D+S + A V ++ D GQ
Sbjct: 1 MTTRVVLAYSGGLDTSVAIPYLAKQTGGEVVAVTIDLGQ 39
>gi|134277601|ref|ZP_01764316.1| argininosuccinate synthase [Burkholderia pseudomallei 305]
gi|134251251|gb|EBA51330.1| argininosuccinate synthase [Burkholderia pseudomallei 305]
Length = 404
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K LL +SGG D+ST L + FD RV + GQ+ E R EL+
Sbjct: 2 KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELV 60
>gi|86605422|ref|YP_474185.1| argininosuccinate synthase [Synechococcus sp. JA-3-3Ab]
gi|119361333|sp|Q2JWE1|ASSY_SYNJA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|86553964|gb|ABC98922.1| argininosuccinate synthase [Synechococcus sp. JA-3-3Ab]
Length = 403
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +A +L +SGG D+S C+ + + + V TL+ D GQ ++E +R
Sbjct: 1 MGRAKKVVLAYSGGVDTSVCIPYLKHEWGVESVVTLAVDLGQGAELEAIQAKALRAG--- 57
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
E ++ A+ I+ + A + + P + R +I +
Sbjct: 58 ---------AEQSLVREAVQTLIADYAFPAIQANALYEQRYPLSTALARPLI-AQLLVEV 107
Query: 123 AYRLGITNIVIG 134
A +G + G
Sbjct: 108 AEEVGADAVAHG 119
>gi|317968799|ref|ZP_07970189.1| PP family ATPase [Synechococcus sp. CB0205]
Length = 285
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLS 39
P+A++ +SGG DS+ + A ++ DR ++
Sbjct: 30 PAAIVAYSGGVDSALVAAIAAEQLGDRALAVT 61
>gi|253583644|ref|ZP_04860842.1| argininosuccinate synthase [Fusobacterium varium ATCC 27725]
gi|251834216|gb|EES62779.1| argininosuccinate synthase [Fusobacterium varium ATCC 27725]
Length = 399
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQR---NKVELECRLCVRKKIVE 62
+L +SGG D+S + W + + V ++ D GQ+ VE + K
Sbjct: 1 MKEKVVLAYSGGLDTSVIIPWLKENYNFDVIAVAVDVGQKDDFAAVEKKALQIGASKF-- 58
Query: 63 LMPKWKDSLGEDHILPL 79
K+ L D I+P+
Sbjct: 59 YAADKKEELVNDFIIPM 75
>gi|169334697|ref|ZP_02861890.1| hypothetical protein ANASTE_01100 [Anaerofustis stercorihominis
DSM 17244]
gi|169257435|gb|EDS71401.1| hypothetical protein ANASTE_01100 [Anaerofustis stercorihominis
DSM 17244]
Length = 405
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L +SGG D+ST + W + +D V + D GQ + E + + K+ +E
Sbjct: 1 MKDKIVLAYSGGLDTSTIVPWLKNNYDCEVHAVCVDVGQVDDNE---KPDLEKRAIEYGA 57
Query: 66 KWKDSLGEDHILPLAILGDISHS 88
D + L + + S
Sbjct: 58 DSIDIIDATEELVNDYIFPMLKS 80
>gi|114771028|ref|ZP_01448468.1| GMP synthase [alpha proteobacterium HTCC2255]
gi|114548310|gb|EAU51196.1| GMP synthase [alpha proteobacterium HTCC2255]
Length = 519
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 30/186 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+ SGG DSS + D++ + D+G R+ +++V + +
Sbjct: 226 ICGLSGGVDSSVAAVLLHEAIGDQLTCVFVDHG-------LLRMGEAEEVVTMFRDHYNM 278
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
LG + S + I +F+ A +G
Sbjct: 279 KLIHADEQELFLGQLDGQSDPETKRKIIGK-------------LFIDVFDKYAKPIGAKF 325
Query: 131 IVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
+ G D +SG P TI++ L + + + PL L K E +L
Sbjct: 326 LAQGTLYPDVIESVSFSGGP---SVTIKSHHNVGGLPEKMDMALVEPLRELFKDEVRELG 382
Query: 185 QDIGGQ 190
+++G
Sbjct: 383 KELGLP 388
>gi|21227453|ref|NP_633375.1| hypothetical protein MM_1351 [Methanosarcina mazei Go1]
gi|20905823|gb|AAM31047.1| conserved protein [Methanosarcina mazei Go1]
Length = 578
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 43/133 (32%), Gaps = 26/133 (19%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
+ ++ + ++ SGG DS ++ V +S YG++ E E V +
Sbjct: 197 VKSTSQQGKTLVVPLSGGLDSRIIVAMLKRLGANDVICVS--YGRKGCRESEISKNVAEA 254
Query: 60 I----------------------VELMPKWKDSLGE-DHILPLAILGDISHSSLTKNVAM 96
+ +L W +L H+ + ++ ++
Sbjct: 255 LGYEWIFVESTAKKWRENYNSKEADLFRIWAANLTSLPHMQDFPTVKELKLQGKIPENSV 314
Query: 97 KIQDNNLPNTFVP 109
+ + T++P
Sbjct: 315 FVPGHTGYGTYIP 327
>gi|313679661|ref|YP_004057400.1| argininosuccinate synthase [Oceanithermus profundus DSM 14977]
gi|313152376|gb|ADR36227.1| argininosuccinate synthase [Oceanithermus profundus DSM 14977]
Length = 396
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
+L +SGG D+S L W ++ + V + D GQ ++VE +
Sbjct: 2 KVVLAYSGGLDTSIILKWLIEEYGAEVIAFTADIGQGDEVEEAREKALA 50
>gi|306825506|ref|ZP_07458846.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sp. oral taxon 071 str. 73H25AP]
gi|304432444|gb|EFM35420.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
sp. oral taxon 071 str. 73H25AP]
Length = 404
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS +L R +E + F
Sbjct: 179 KGVLMLSGGIDSPVAGYLSLKRGVDIEAVHF 209
>gi|301299185|ref|ZP_07205473.1| argininosuccinate synthase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300853213|gb|EFK80809.1| argininosuccinate synthase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 403
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMP 65
+ +L +SGG D+S ++W ++ V D G+ +E ++ VE ++
Sbjct: 2 EKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVGEGKDLEAIKEKGLKVGAVESIVI 61
Query: 66 KWKDSLGEDHILP 78
K E+++LP
Sbjct: 62 DAKHEFAEEYVLP 74
>gi|227891841|ref|ZP_04009646.1| argininosuccinate synthase [Lactobacillus salivarius ATCC 11741]
gi|227866304|gb|EEJ73725.1| argininosuccinate synthase [Lactobacillus salivarius ATCC 11741]
Length = 409
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMP 65
+ +L +SGG D+S ++W ++ V D G+ +E ++ VE ++
Sbjct: 8 EKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVGEGKDLEAIKEKGLKVGAVESIVI 67
Query: 66 KWKDSLGEDHILP 78
K E+++LP
Sbjct: 68 DAKHEFAEEYVLP 80
>gi|225868671|ref|YP_002744619.1| thiamine biosynthesis protein [Streptococcus equi subsp.
zooepidemicus]
gi|259518591|sp|C0MGK8|THII_STRS7 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|225701947|emb|CAW99481.1| putative thiamine biosynthesis protein [Streptococcus equi subsp.
zooepidemicus]
Length = 404
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 60/192 (31%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +L R +E + F +K +L +
Sbjct: 179 KGMLMLSGGIDSPVAGYLSLKRGVEIEAVHF------ASPPYTSPGALRKAKDLTQRLTR 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K + L T R L + +
Sbjct: 233 FGGNIQFIEVPF------TEIQEEIKHKAPEAYLMTLT----R-RFMLRITDAIREKRKA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + + +E+ + + + P++ + K E +AQ I
Sbjct: 282 LVIINGESLGQVAS---------QTLESMQAINAVTSTPIIRPVVAMDKLEIIDIAQQID 332
Query: 189 GQDLVNLILEES 200
D+ E+
Sbjct: 333 TFDISIQPFEDC 344
>gi|225870374|ref|YP_002746321.1| thiamine biosynthesis protein [Streptococcus equi subsp. equi 4047]
gi|254784231|sp|C0M8U4|THII_STRE4 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|225699778|emb|CAW93573.1| putative thiamine biosynthesis protein [Streptococcus equi subsp.
equi 4047]
Length = 404
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 60/192 (31%), Gaps = 27/192 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +L R +E + F +K +L +
Sbjct: 179 KGMLMLSGGIDSPVAGYLSLKRGVEIEAVHF------ASPPYTSPGALRKAKDLTQRLTR 232
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGI 128
G + + + + + + K + L T R L + +
Sbjct: 233 FGGNIQFIEVPF------TEIQEEIKHKAPEAYLMTLT----R-RFMLRITDAIREKRKA 281
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
I+ G + + +E+ + + + P++ + K E +AQ I
Sbjct: 282 LVIINGESLGQVAS---------QTLESMQAINAVTSTPIIRPVVAMDKLEIIDIAQQID 332
Query: 189 GQDLVNLILEES 200
D+ E+
Sbjct: 333 TFDISIQPFEDC 344
>gi|261403929|ref|YP_003240170.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. Y412MC10]
gi|261280392|gb|ACX62363.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. Y412MC10]
Length = 476
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 56/196 (28%), Gaps = 41/196 (20%)
Query: 12 LLLFSGGQDSSTCLSWALDRFD-----RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DS L + R+ +G R + + E + + EL
Sbjct: 30 VVAVSGGPDSVALLHVLHEISQHRTPLRLICAHVHHGFRKESDQEAEM-----VRELAES 84
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
L I A + + + + FL A +
Sbjct: 85 LGLPLETAFIDIPAYMEESGKGGQEAAREKRYE---------------FL---LQTARKH 126
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL--------GMESHVTVHTPLMWLKKY 178
++ + D + +R + + E V + P + + K
Sbjct: 127 NARSVALAHHADDQA-----ETVFMRLLRGSGLSGLGGIKFKRTEKKVELIRPFLRMYKA 181
Query: 179 ETWKLAQDIGGQDLVN 194
+ +L + G Q V+
Sbjct: 182 DIVELCRVCGFQYAVD 197
>gi|161529233|ref|YP_001583059.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrosopumilus maritimus SCM1]
gi|160340534|gb|ABX13621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrosopumilus maritimus SCM1]
Length = 337
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
K+ + L SGG DS + ++ V ++
Sbjct: 5 KEKKKVVALLSGGLDSQLAVRMMQEQGFDVSAVAI 39
>gi|145342431|ref|XP_001416186.1| Asparagine synthase (glutamine-hydrolyzing) related protein
[Ostreococcus lucimarinus CCE9901]
gi|144576411|gb|ABO94479.1| Asparagine synthase (glutamine-hydrolyzing) related protein
[Ostreococcus lucimarinus CCE9901]
Length = 548
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR 31
K L+LFSGG DS+T S A
Sbjct: 268 PPHDKMAQVLVLFSGGLDSTTIASLAHRH 296
>gi|123966685|ref|YP_001011766.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
MIT 9515]
gi|205816903|sp|A2BXZ8|MNMA_PROM5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|123201051|gb|ABM72659.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prochlorococcus marinus str. MIT 9515]
Length = 390
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
N+ KK ++ SGG DSS + ++ +VE L+
Sbjct: 17 NNKSKKQKHIVVGLSGGVDSSLSAALLMEDGWKVEGLT 54
>gi|158319585|ref|YP_001512092.1| GMP synthase, large subunit [Alkaliphilus oremlandii OhILAs]
gi|158139784|gb|ABW18096.1| GMP synthase, large subunit [Alkaliphilus oremlandii OhILAs]
Length = 319
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
A+ SGG DS+ D++ + D+G
Sbjct: 24 NKKAICALSGGVDSTVSAVLVHKAIGDQLTCIFVDHG 60
>gi|299065725|emb|CBJ36899.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia solanacearum CMR15]
Length = 370
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 4 KRVVVGMSGGVDSSVTAWLLKQQGYEVIGL 33
>gi|271500468|ref|YP_003333493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dickeya dadantii Ech586]
gi|270344023|gb|ACZ76788.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dickeya dadantii Ech586]
Length = 370
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVEGL 36
>gi|237653339|ref|YP_002889653.1| argininosuccinate synthase [Thauera sp. MZ1T]
gi|237624586|gb|ACR01276.1| argininosuccinate synthase [Thauera sp. MZ1T]
Length = 409
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W D + V T + D GQ ++E ++ I
Sbjct: 1 MSDVNKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEPARAKALQFGI 57
>gi|298492972|ref|YP_003723149.1| argininosuccinate synthase ['Nostoc azollae' 0708]
gi|298234890|gb|ADI66026.1| argininosuccinate synthase ['Nostoc azollae' 0708]
Length = 399
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +A +L +SGG D+S C+ + + + V TL+ D GQ +++EL ++ E
Sbjct: 1 MGRAKKVVLAYSGGVDTSVCIPYLKKEWGVEEVITLAADLGQGDELELVREKALKSGASE 60
Query: 63 LM 64
+
Sbjct: 61 SL 62
>gi|205374227|ref|ZP_03227026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus coahuilensis m4-4]
Length = 371
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN K ++ SGG DSS ++ V +
Sbjct: 1 MNKAPKDT-RVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|194467785|ref|ZP_03073771.1| Argininosuccinate synthase [Lactobacillus reuteri 100-23]
gi|194452638|gb|EDX41536.1| Argininosuccinate synthase [Lactobacillus reuteri 100-23]
Length = 410
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+L +SGG D+S ++W ++ V D G
Sbjct: 2 SKEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG 38
>gi|118588086|ref|ZP_01545496.1| NAD synthetase [Stappia aggregata IAM 12614]
gi|118439708|gb|EAV46339.1| NAD synthetase [Stappia aggregata IAM 12614]
Length = 555
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 12 LLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVEL---ECRLCVRKKIVELMP 65
++L SGG DS+ C + A+D D+V + Y R E + C + +
Sbjct: 290 VVLGLSGGIDSAICAAMAVDALGADKVHAIMLPY--RYTSEESITDAAACAKALGIRYDT 347
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN 93
E L+ L + T+
Sbjct: 348 VPISEPVEGFRSALSNLFAGTKEDTTEE 375
>gi|110639453|ref|YP_679662.1| argininosuccinate synthetase [Cytophaga hutchinsonii ATCC 33406]
gi|110282134|gb|ABG60320.1| argininosuccinate synthetase [Cytophaga hutchinsonii ATCC 33406]
Length = 398
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 24/172 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L FSGG D++ C + + + T + G +K EL + KK EL
Sbjct: 1 MKKKVVLAFSGGLDTTYCAKYLSEDLGYELHTAIVNTGGFSKEEL---ADIEKKAYEL-- 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
+ L + + +++N P + R +F A A
Sbjct: 56 ----GVTSHTTLDIIE-KYYAECVKYMVYGNILRNNTYPLSVSAER--VFQAMAIAEHAK 108
Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
++G T + + +G +D +R + + M + + TP+ +K
Sbjct: 109 KVGATAV---AHGSTGAG-----NDQVR-FDVVFMI-MNPGIEIITPIRDMK 150
>gi|294496272|ref|YP_003542765.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanohalophilus mahii DSM 5219]
gi|292667271|gb|ADE37120.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanohalophilus mahii DSM 5219]
Length = 391
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 57/189 (30%), Gaps = 39/189 (20%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++L SGG DS + R +V + + E R+K ++ + D
Sbjct: 183 VVLLSGGIDSPVAAWLLMRRGVKVIPVFCN------NEPFSDEATRQKAIKCVKVLNDWS 236
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
+ + + ++ N ++K T A + + + I
Sbjct: 237 AGTPMKMYEVPNGKNLQAIRDNCSLKNTCILCKRT--------MYRIAFEVMEKEKASGI 288
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMES--------HVTVHTPLMWLKKYETWKL 183
+ G ++ + + ++ PL+ K E +
Sbjct: 289 ITG-----------------SSLGQVASQTTYNLHAEIYGLGFPIYHPLISFDKTEIIDM 331
Query: 184 AQDIGGQDL 192
A+ IG ++
Sbjct: 332 ARKIGTFEI 340
>gi|284053008|ref|ZP_06383218.1| argininosuccinate synthase [Arthrospira platensis str. Paraca]
gi|291570755|dbj|BAI93027.1| argininosuccinate synthase [Arthrospira platensis NIES-39]
Length = 400
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 15/132 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +A A+L +SGG D+S C+ + + F V T++ D GQ ++
Sbjct: 1 MGRAEKAVLAYSGGVDTSVCIPYLKNEFGVAEVITVAVDLGQ------------GDELGP 48
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ K DS + ++ + + A + +N P R +I +
Sbjct: 49 VKQKALDSGASESLVIDVQQRFVQEFAFPAIQANALYENRYPLATALARPLI-AQILVEV 107
Query: 123 AYRLGITNIVIG 134
A + G I G
Sbjct: 108 AEKYGADAIAHG 119
>gi|167772092|ref|ZP_02444145.1| hypothetical protein ANACOL_03466 [Anaerotruncus colihominis DSM
17241]
gi|167665890|gb|EDS10020.1| hypothetical protein ANACOL_03466 [Anaerotruncus colihominis DSM
17241]
Length = 349
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ L+ SGG DSS + V +F
Sbjct: 1 MERTVLVAMSGGVDSSVAALLLKRQGYEVAGATF 34
>gi|300710433|ref|YP_003736247.1| asparagine synthase [Halalkalicoccus jeotgali B3]
gi|299124116|gb|ADJ14455.1| asparagine synthase [Halalkalicoccus jeotgali B3]
Length = 536
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS +F YGQ + E+E V I
Sbjct: 194 LSGGVDSRLIALHLKRAGYNNI-FTFTYGQPGESEVETARQVADDI 238
>gi|262306047|gb|ACY45616.1| gln amidotransferase [Eurypauropus spinosus]
Length = 197
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
L+L SGG DS+ C++ + V L D G
Sbjct: 43 RNKVLMLVSGGVDSTVCVALLHKALGAENVIALHIDNG 80
>gi|257094501|ref|YP_003168142.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047025|gb|ACV36213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 366
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K + ++ SGG DSS ++ V L
Sbjct: 1 MNKGKTVVVGLSGGVDSSVAALLLKEQGWHVVGL 34
>gi|148543962|ref|YP_001271332.1| argininosuccinate synthase [Lactobacillus reuteri DSM 20016]
gi|184153357|ref|YP_001841698.1| argininosuccinate synthase [Lactobacillus reuteri JCM 1112]
gi|166989392|sp|A5VJH1|ASSY_LACRD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|229889877|sp|B2G6Y6|ASSY_LACRJ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|148530996|gb|ABQ82995.1| argininosuccinate synthase [Lactobacillus reuteri DSM 20016]
gi|183224701|dbj|BAG25218.1| argininosuccinate synthase [Lactobacillus reuteri JCM 1112]
Length = 410
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+L +SGG D+S ++W ++ V D G
Sbjct: 2 SKEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG 38
>gi|325845310|ref|ZP_08168613.1| asparagine synthase (glutamine-hydrolyzing) [Turicibacter sp. HGF1]
gi|325488671|gb|EGC91077.1| asparagine synthase (glutamine-hydrolyzing) [Turicibacter sp. HGF1]
Length = 602
Score = 38.3 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDY 42
SGG DSS + A + + T S DY
Sbjct: 258 LSGGLDSSIITAIAANEMKNLHTFSIDY 285
>gi|293376142|ref|ZP_06622388.1| asparagine synthase (glutamine-hydrolyzing) [Turicibacter sanguinis
PC909]
gi|292645215|gb|EFF63279.1| asparagine synthase (glutamine-hydrolyzing) [Turicibacter sanguinis
PC909]
Length = 602
Score = 38.3 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDY 42
SGG DSS + A + + T S DY
Sbjct: 258 LSGGLDSSIITAIAANEMKNLHTFSIDY 285
>gi|157813150|gb|ABV81320.1| putative GMP synthetase [Thulinius stephaniae]
Length = 199
Score = 38.3 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
K +LL SGG DS+ C + D++ L D G
Sbjct: 42 KDKKVVLLASGGVDSTVCAALLXKVLPADQLFVLHIDNG 80
>gi|121606012|ref|YP_983341.1| LPS biosynthesis protein WbpG [Polaromonas naphthalenivorans CJ2]
gi|120594981|gb|ABM38420.1| LPS biosynthesis protein WbpG [Polaromonas naphthalenivorans CJ2]
Length = 380
Score = 38.3 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 47/138 (34%), Gaps = 18/138 (13%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K +L SGG DSS +R R + D G EL +E + K
Sbjct: 66 KPYDCILGLSGGVDSSYLALKVHERGLRPLVVHVDAG--WNSELAVAN------IEKIVK 117
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ D H++ + D+ + + + N VP +I F A +
Sbjct: 118 FCDFDLHTHVVDWEEMRDL---------QLAFLRSGIANQDVPQDHIFFASI-YHYATKH 167
Query: 127 GITNIVIGVCETDYSGYP 144
GI ++ G YP
Sbjct: 168 GIKYVLSGGNLATEGIYP 185
>gi|222099059|ref|YP_002533627.1| tRNA(Ile)-lysidine synthase [Thermotoga neapolitana DSM 4359]
gi|221571449|gb|ACM22261.1| tRNA(Ile)-lysidine synthase [Thermotoga neapolitana DSM 4359]
Length = 419
Score = 38.3 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 27/142 (19%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
N +I + L+ SGG DS T L V D+ R E + R
Sbjct: 4 NRLIGEGDIVLVAVSGGIDSMTLLYILKKLSPLLKIEVLGAHLDHRIRESSERD-----R 58
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
K + ++ +W + + A+ + ++
Sbjct: 59 KFVEDICRQWNVPVETAVVDVPALWKGSGKTLEEVAREVRY------------------S 100
Query: 118 FAATLAYRLGITNIVIGVCETD 139
F +A +LG T I + + D
Sbjct: 101 FLEKVAKKLGATKIALAHHKND 122
>gi|110597546|ref|ZP_01385832.1| argininosuccinate synthase [Chlorobium ferrooxidans DSM 13031]
gi|110340865|gb|EAT59339.1| argininosuccinate synthase [Chlorobium ferrooxidans DSM 13031]
Length = 400
Score = 38.3 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
+ K A+ SGG D+S + W D++D + ++ + GQ ++E
Sbjct: 1 MSKEKIAIAY-SGGLDTSVMIKWLKDKYDAEIVAVTGNLGQTKEIE 45
>gi|110638005|ref|YP_678212.1| tRNA-specific 2-thiouridylase MnmA [Cytophaga hutchinsonii ATCC
33406]
gi|110280686|gb|ABG58872.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cytophaga hutchinsonii ATCC 33406]
Length = 358
Score = 38.3 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
SGG DSS ++ V ++ DY + E C I +
Sbjct: 1 MSGGIDSSVAAVMLHEQGYEVIGMTMKTWDYANLGGSKKETGCCSLDSINDARNIAVSLG 60
Query: 72 GEDHILPL 79
+I+ +
Sbjct: 61 FPHYIVDI 68
>gi|302799236|ref|XP_002981377.1| hypothetical protein SELMODRAFT_233685 [Selaginella moellendorffii]
gi|300150917|gb|EFJ17565.1| hypothetical protein SELMODRAFT_233685 [Selaginella moellendorffii]
Length = 533
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 63/197 (31%), Gaps = 33/197 (16%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+ SGG DS+ + DR+ + D G E E + K+ + L
Sbjct: 227 NEHAICALSGGVDSTVAATLVHKALGDRLHCVFVDNGLLRYKEQERVMETFKRELHLPVV 286
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D+ L + + + I + +F FA L L
Sbjct: 287 CVDAST-------DFLSRLRGVTDPEQKRKIIGAQFIS---------VFDKFACHLEEEL 330
Query: 127 GITNIVIGVCETDYSGYPD----CRH--------DTIRAIETAINLGMESHVTVHTPLMW 174
G T + + YPD C TI++ L + + PL W
Sbjct: 331 GKTATFL----VQGTLYPDVIESCPPPGSGKGHSHTIKSHHNVGGLPAVMKLKLLEPLKW 386
Query: 175 LKKYETWKLAQDIGGQD 191
L K E KL + +G +
Sbjct: 387 LFKDEVRKLGKLLGVPE 403
>gi|266620688|ref|ZP_06113623.1| GMP synthase protein [Clostridium hathewayi DSM 13479]
gi|288867681|gb|EFC99979.1| GMP synthase protein [Clostridium hathewayi DSM 13479]
Length = 435
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + V K ++ +
Sbjct: 141 KKVLLALSGGVDSSVVAALLIKAIGKQLTCVHVNHGLMRKGESESVIDVFKHQLDANLVY 200
Query: 68 KDS 70
D+
Sbjct: 201 VDA 203
>gi|315497058|ref|YP_004085862.1| argininosuccinate synthase [Asticcacaulis excentricus CB 48]
gi|315415070|gb|ADU11711.1| argininosuccinate synthase [Asticcacaulis excentricus CB 48]
Length = 411
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK 58
M +K ++L +SGG D+S L W + V T + D GQ ELE +
Sbjct: 1 MTSPTEKPVKKVVLAYSGGLDTSIILKWLQTEYNAEVVTFTADLGQ--GEELEPARKKAE 58
Query: 59 KI 60
+
Sbjct: 59 LL 60
>gi|225874646|ref|YP_002756105.1| argininosuccinate synthase [Acidobacterium capsulatum ATCC 51196]
gi|254807501|sp|C1F510|ASSY_ACIC5 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|225793473|gb|ACO33563.1| argininosuccinate synthase [Acidobacterium capsulatum ATCC 51196]
Length = 445
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ ++ + E + +K +E + +
Sbjct: 18 FSGGLDTSAALHWMKQKGALPYAYTANLGQPDETDYEA---IPRKALEYGAEIARLIDCR 74
Query: 75 HILPLAILGDISHSSLTKNVA 95
L + + + A
Sbjct: 75 EPLVREGIAALQSGAFHITTA 95
>gi|223040620|ref|ZP_03610890.1| argininosuccinate synthase [Campylobacter rectus RM3267]
gi|222878078|gb|EEF13189.1| argininosuccinate synthase [Campylobacter rectus RM3267]
Length = 407
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+KK ++L +SGG D+S L W D + V T + D GQ ++E R+K +E
Sbjct: 1 MKKDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELE-----PARQKALE 55
Query: 63 LMPKWKDSLGED 74
L K ++ ED
Sbjct: 56 LGIKPENIFIED 67
>gi|29349296|ref|NP_812799.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341204|gb|AAO78993.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
methyltransferase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 351
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 28/126 (22%)
Query: 15 FSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELMPKWKD 69
SGG DS+ TCL ++ + ++ D Q + EL R+ + + + +K+
Sbjct: 1 MSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAARMGIEHYVADERIPFKE 58
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LVFAATLAYRLGI 128
++ ++ I + + PN V N +F A A +L
Sbjct: 59 TIVKNFI-------------------DEYKQGRTPNPCVMC-NPLFKFRVLAEWADKLDC 98
Query: 129 TNIVIG 134
I G
Sbjct: 99 AYIATG 104
>gi|52081436|ref|YP_080227.1| argininosuccinate synthase [Bacillus licheniformis ATCC 14580]
gi|52786811|ref|YP_092640.1| argininosuccinate synthase [Bacillus licheniformis ATCC 14580]
gi|319647344|ref|ZP_08001566.1| argininosuccinate synthase [Bacillus sp. BT1B_CT2]
gi|59799163|sp|Q65G67|ASSY_BACLD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|52004647|gb|AAU24589.1| argininosuccinate synthase [Bacillus licheniformis ATCC 14580]
gi|52349313|gb|AAU41947.1| ArgG [Bacillus licheniformis ATCC 14580]
gi|317390691|gb|EFV71496.1| argininosuccinate synthase [Bacillus sp. BT1B_CT2]
Length = 403
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W ++ V D G
Sbjct: 1 MTQKKKVVLAYSGGLDTSVAIKWLQEQGYDVVACCLDVG 39
>gi|30172869|sp|Q8GDU2|ASSY_HELMO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|27262410|gb|AAN87486.1| Argininosuccinate synthase [Heliobacillus mobilis]
Length = 408
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE 49
M + + +L +SGG D+S + W + + V ++ D GQ ++E
Sbjct: 1 MKGALGMSKKVVLAYSGGLDTSIIIPWLKENYGYEVIAMAADLGQGEELE 50
>gi|251799699|ref|YP_003014430.1| argininosuccinate synthase [Paenibacillus sp. JDR-2]
gi|247547325|gb|ACT04344.1| argininosuccinate synthase [Paenibacillus sp. JDR-2]
Length = 411
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVELMP 65
+L +SGG D+S L W + +D + + D GQ+ +++ LE + +
Sbjct: 3 KEKIVLAYSGGLDTSIILKWLKETYDAEIIAFTADIGQKEELDGLEAKALATGASKVYID 62
Query: 66 KWKDSLGEDHILPL 79
+ D I P+
Sbjct: 63 DLRAEFASDFIFPM 76
>gi|157273520|gb|ABV27419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Chloracidobacterium thermophilum]
Length = 392
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQR 45
+ SGG DSST + ++ V S + QR
Sbjct: 1 MTERIAVAMSGGVDSSTAAALLKEQGYDVVGFSMQLWNQR 40
>gi|78485259|ref|YP_391184.1| argininosuccinate synthase [Thiomicrospira crunogena XCL-2]
gi|119361340|sp|Q31H63|ASSY_THICR RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|78363545|gb|ABB41510.1| argininosuccinate synthase [Thiomicrospira crunogena XCL-2]
Length = 402
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +L +SGG D+S W + + V T + D GQ +V I E+
Sbjct: 1 MSQIKKVVLAYSGGLDTSIIAKWLQEEYQCEVVTFTADIGQGEEVAPARAKAEAMGIKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I ++
Sbjct: 61 YIEDLREEFARDFVFPMMRANAIYEGEYRLGTSIA 95
>gi|77165573|ref|YP_344098.1| argininosuccinate synthase [Nitrosococcus oceani ATCC 19707]
gi|254433702|ref|ZP_05047210.1| argininosuccinate synthase [Nitrosococcus oceani AFC27]
gi|119361298|sp|Q3J9C8|ASSY_NITOC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|76883887|gb|ABA58568.1| argininosuccinate synthase [Nitrosococcus oceani ATCC 19707]
gi|207090035|gb|EDZ67306.1| argininosuccinate synthase [Nitrosococcus oceani AFC27]
Length = 405
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + +D V T + D GQ +V + E+
Sbjct: 1 MSTIKKVVLAYSGGLDTSVILKWLQETYDCEVVTFTADIGQGEEVAPARAKAETLGVKEI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 YIEDLREEFCRDYVFPM 77
>gi|47204754|emb|CAF92957.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W ++ V T + GQ + E L +K +E
Sbjct: 4 TVVLAYSGGLDTSCILVWLKEQGYDVITFLANVGQDEDFKAAKEKAETLGAKKVFIE 60
>gi|17547442|ref|NP_520844.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia solanacearum GMI1000]
gi|24638316|sp|Q8XVV4|MNMA_RALSO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|17429745|emb|CAD16430.1| probable trna
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
protein [Ralstonia solanacearum GMI1000]
Length = 370
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 4 KRVVVGMSGGVDSSVTAWLLKQQGYEVIGL 33
>gi|317477931|ref|ZP_07937114.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
gi|316905845|gb|EFV27616.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
Length = 363
Score = 38.3 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+K LL SGG DSS + V ++F
Sbjct: 14 MKSDKRVLLGMSGGTDSSVAAMRLQEAGYEVTGVTFR 50
>gi|300113670|ref|YP_003760245.1| argininosuccinate synthase [Nitrosococcus watsonii C-113]
gi|299539607|gb|ADJ27924.1| argininosuccinate synthase [Nitrosococcus watsonii C-113]
Length = 405
Score = 38.3 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + + V T + D GQ +V + E+
Sbjct: 1 MSAIKKVVLAYSGGLDTSVILKWLQETYGCEVVTFTADIGQGEEVAPARAKAEALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 YIEDLREEFCRDYVFPM 77
>gi|134298633|ref|YP_001112129.1| tRNA-specific 2-thiouridylase MnmA [Desulfotomaculum reducens
MI-1]
gi|172044262|sp|A4J2K1|MNMA_DESRM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|134051333|gb|ABO49304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfotomaculum reducens MI-1]
Length = 367
Score = 38.3 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ L+ SGG DSS + + + ++
Sbjct: 1 MAIQKRVLVAMSGGVDSSVTAALLQQQGYDIVGVT 35
>gi|329121915|ref|ZP_08250529.1| GMP synthase [Dialister micraerophilus DSM 19965]
gi|327467712|gb|EGF13208.1| GMP synthase [Dialister micraerophilus DSM 19965]
Length = 512
Score = 38.3 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 59/193 (30%), Gaps = 32/193 (16%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ SGG DSS +++ + D+G RL K++VE K
Sbjct: 216 KNKVICALSGGVDSSVAAVLVHRAIGEQLTCVFVDHG-------FMRLGEAKQVVETF-K 267
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K ++ HI ++ KI NTF +
Sbjct: 268 NKFNMKLVHIDASKHFMELLEGVTEPEKKRKIIGAEFINTF-----------------QR 310
Query: 127 GITNIVIGVCETDYSGYPD------CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
I + YPD TI++ L + + PL L K E
Sbjct: 311 EADKIKDVKFLVQGTLYPDVVESGTATAATIKSHHNVGGLPKDMKFKLIEPLRELFKDEV 370
Query: 181 WKLAQDIGGQDLV 193
+L + +G + +
Sbjct: 371 RELGRQLGMPEEI 383
>gi|313892419|ref|ZP_07826010.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Dialister microaerophilus UPII 345-E]
gi|313119180|gb|EFR42381.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Dialister microaerophilus UPII 345-E]
Length = 512
Score = 38.3 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 59/193 (30%), Gaps = 32/193 (16%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ SGG DSS +++ + D+G RL K++VE K
Sbjct: 216 KNKVICALSGGVDSSVAAVLVHRAIGEQLTCVFVDHG-------FMRLGEAKQVVETF-K 267
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
K ++ HI ++ KI NTF +
Sbjct: 268 NKFNMKLVHIDASKHFMELLEGVTEPEKKRKIIGAEFINTF-----------------QR 310
Query: 127 GITNIVIGVCETDYSGYPD------CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
I + YPD TI++ L + + PL L K E
Sbjct: 311 EADKIKDVKFLVQGTLYPDVVESGTATAATIKSHHNVGGLPKDMKFKLIEPLRELFKDEV 370
Query: 181 WKLAQDIGGQDLV 193
+L + +G + +
Sbjct: 371 RELGRQLGMPEEI 383
>gi|289548315|ref|YP_003473303.1| argininosuccinate synthase [Thermocrinis albus DSM 14484]
gi|289181932|gb|ADC89176.1| argininosuccinate synthase [Thermocrinis albus DSM 14484]
Length = 398
Score = 38.3 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+L +SGG D+S + W +R V T + D GQ
Sbjct: 1 MPKRVILAYSGGLDTSVIVRWLTERGYEVITYTADVGQ 38
>gi|254499186|ref|ZP_05111866.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
[Legionella drancourtii LLAP12]
gi|254351576|gb|EET10431.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
[Legionella drancourtii LLAP12]
Length = 361
Score = 38.3 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ VE L
Sbjct: 1 MKAKIIVGMSGGVDSSVAAWLLKEQGYEVEGL 32
>gi|225573524|ref|ZP_03782279.1| hypothetical protein RUMHYD_01717 [Blautia hydrogenotrophica DSM
10507]
gi|225039121|gb|EEG49367.1| hypothetical protein RUMHYD_01717 [Blautia hydrogenotrophica DSM
10507]
Length = 362
Score = 38.3 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS V ++
Sbjct: 3 RKRVVIGMSGGVDSSVAAYLLKKAGYEVLGVT 34
>gi|126724597|ref|ZP_01740440.1| argininosuccinate synthase [Rhodobacterales bacterium HTCC2150]
gi|126705761|gb|EBA04851.1| argininosuccinate synthase [Rhodobacterales bacterium HTCC2150]
Length = 405
Score = 38.3 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + V T + D GQ ++E E+
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKAEMMGASEI 60
Query: 64 M 64
Sbjct: 61 F 61
>gi|293977833|ref|YP_003543263.1| argininosuccinate synthase [Candidatus Sulcia muelleri DMIN]
gi|292667764|gb|ADE35399.1| Argininosuccinate synthase [Candidatus Sulcia muelleri DMIN]
Length = 579
Score = 38.3 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + K LL +SGG D+S CL + + +V T+ + G N +LE I
Sbjct: 181 NNLNKGDKILLAYSGGLDTSYCLKYLTNEGYKVITIIINTGVFNNKDLESIEKRALNIGA 240
Query: 63 LMP 65
+
Sbjct: 241 ISH 243
>gi|261876168|ref|YP_697160.2| tRNA(Ile)-lysidine synthetase [Clostridium perfringens ATCC 13124]
gi|281185487|sp|Q0TMI0|TILS_CLOP1 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|255529904|gb|ABG82412.2| tRNA(Ile)-lysidine synthetase [Clostridium perfringens ATCC 13124]
Length = 469
Score = 38.3 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 15/105 (14%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
N +IK L+ SGG DS L + + V + + + E L
Sbjct: 12 NSMIKNGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
+ EL + DI+ S +N++ ++
Sbjct: 68 AYVEELCKNLNIKCFVKRV-------DINKISEEQNISTEMAGRE 105
>gi|239813406|ref|YP_002942316.1| tRNA-specific 2-thiouridylase MnmA [Variovorax paradoxus S110]
gi|239799983|gb|ACS17050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Variovorax paradoxus S110]
Length = 369
Score = 38.3 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 6/31 (19%), Positives = 11/31 (35%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + V +
Sbjct: 3 KQRIVVGLSGGVDSAVTAHLLKQQGHEVVGI 33
>gi|182626023|ref|ZP_02953786.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens D str.
JGS1721]
gi|177908730|gb|EDT71241.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens D str.
JGS1721]
Length = 469
Score = 38.3 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 15/105 (14%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
N +IK L+ SGG DS L + + V + + + E L
Sbjct: 12 NSMIKNGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
+ EL + DI+ S +N++ ++
Sbjct: 68 AYVEELCKNLNIKCFVKRV-------DINKISEEQNISTEMAGRE 105
>gi|168218232|ref|ZP_02643857.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens NCTC 8239]
gi|182379755|gb|EDT77234.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens NCTC 8239]
Length = 469
Score = 38.3 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 15/105 (14%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
N +IK L+ SGG DS L + + V + + + E L
Sbjct: 12 NSMIKNGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
+ EL + DI+ S +N++ ++
Sbjct: 68 AYVEELCKNLNIKCFVKRV-------DINKISEEQNISTEMAGRE 105
>gi|168206867|ref|ZP_02632872.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens E str.
JGS1987]
gi|168211206|ref|ZP_02636831.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens B str. ATCC
3626]
gi|170661729|gb|EDT14412.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens E str.
JGS1987]
gi|170710765|gb|EDT22947.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens B str. ATCC
3626]
Length = 469
Score = 38.3 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 15/105 (14%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
N +IK L+ SGG DS L + + V + + + E L
Sbjct: 12 NSMIKNGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
+ EL + DI+ S +N++ ++
Sbjct: 68 AYVEELCKNLNIKCFVKRV-------DINKISEEQNISTEMAGRE 105
>gi|59713785|ref|YP_206560.1| NAD synthetase [Vibrio fischeri ES114]
gi|75352777|sp|Q5DZX4|NADE_VIBF1 RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|59482033|gb|AAW87672.1| NAD synthetase, NH3/glutamine-dependent [Vibrio fischeri ES114]
Length = 276
Score = 38.3 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 63/204 (30%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWA-----------LDRFDRVETLSFDYG-QRNKVE 49
+++ +L+L SGG DS+TC A + + YG Q+++ E
Sbjct: 31 KLLEAHCKSLILGISGGVDSTTCGRLAQLAVNELNLETQSSDYQFIAVRLPYGIQQDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K+ + H L D T + + N+
Sbjct: 91 AQLALQFIQPTHSISINIKNGVDGLHSANHIALKDTGLL-PTDSAKIDFVKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMIAQYEVAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + ++A +G + +
Sbjct: 188 APLFGLNKRQVREVAAQLGAPEQL 211
>gi|323702190|ref|ZP_08113857.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfotomaculum nigrificans DSM 574]
gi|323532877|gb|EGB22749.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfotomaculum nigrificans DSM 574]
Length = 366
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + SGG DSS + + V ++
Sbjct: 1 MTTKGKVIAAMSGGVDSSVTAALLQQQGYEVVGVT 35
>gi|305664132|ref|YP_003860420.1| argininosuccinate synthase [Ignisphaera aggregans DSM 17230]
gi|304378701|gb|ADM28540.1| argininosuccinate synthase [Ignisphaera aggregans DSM 17230]
Length = 395
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L +SGG D+ST L ++ V T++ D GQ + EL ++ +
Sbjct: 2 RVVLAYSGGLDTSTILVLLRKKYNAEVITVTVDVGQ--EDELRDVEKRAYELGAIKHYTI 59
Query: 69 DSLGE 73
D+ E
Sbjct: 60 DAKKE 64
>gi|300310029|ref|YP_003774121.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Herbaspirillum seropedicae SmR1]
gi|300072814|gb|ADJ62213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
protein [Herbaspirillum seropedicae SmR1]
Length = 368
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKKRVVIGMSGGVDSSVSAWLLKEQGYEVIGL 33
>gi|239979142|ref|ZP_04701666.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces albus J1074]
gi|291451019|ref|ZP_06590409.1| NAD(+) synthase [Streptomyces albus J1074]
gi|291353968|gb|EFE80870.1| NAD(+) synthase [Streptomyces albus J1074]
Length = 585
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSF--DYGQRNKV----ELECRLCVRKKI 60
S L+ SGG DS+ + A+D + V +S Y + EL R + +
Sbjct: 327 RSVLIGLSGGIDSALTAALAVDAIGAEHVYGVSMPSKYSSEHSKDDAAELARRTGLHYRT 386
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
V + P + +GE + LA S T +A+ Q+ +
Sbjct: 387 VSIAPMFDAYMGELGLTGLAEENLQSRLRGTTLMAISNQEGQI 429
>gi|224437009|ref|ZP_03657990.1| argininosuccinate synthase [Helicobacter cinaedi CCUG 18818]
gi|313143482|ref|ZP_07805675.1| argininosuccinate synthase [Helicobacter cinaedi CCUG 18818]
gi|313128513|gb|EFR46130.1| argininosuccinate synthase [Helicobacter cinaedi CCUG 18818]
Length = 401
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 24/134 (17%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
+L +SGG D+S L W D + V T + D GQ +VE ++ I +
Sbjct: 4 KKVVLAYSGGLDTSVILKWLGDNYNCEVVTFTADIGQGEEVEPARAKALKLGIKSENIFI 63
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---AT 121
++ +D + P+ I ++ + A
Sbjct: 64 EDLREEFIKDFVFPMFRANTIYEGEYLLGTSIARP-----------------LIAKRLVE 106
Query: 122 LAYRLGITNIVIGV 135
+A +G + G
Sbjct: 107 IAKAVGADAVAHGA 120
>gi|197337839|ref|YP_002158160.1| NAD+ synthetase [Vibrio fischeri MJ11]
gi|238689988|sp|B5ETZ2|NADE_VIBFM RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|197315091|gb|ACH64540.1| NAD+ synthetase [Vibrio fischeri MJ11]
Length = 276
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 63/204 (30%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWA-----------LDRFDRVETLSFDYG-QRNKVE 49
+++ +L+L SGG DS+TC A + + YG Q+++ E
Sbjct: 31 KLLEAHCKSLILGISGGVDSTTCGRLAQLAVNELNLETQSSDYQFIAVRLPYGIQQDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + KD + H L D T + + N+
Sbjct: 91 AQLALQFIQPTHSISINIKDGVDGLHSANHIALQDTGLL-PTDSAKIDFVKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMIAQYEVAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + ++A +G + +
Sbjct: 188 APLFGLNKRQVREVAAQLGAPEQL 211
>gi|308809381|ref|XP_003082000.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (ISS)
[Ostreococcus tauri]
gi|116060467|emb|CAL55803.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (ISS)
[Ostreococcus tauri]
Length = 467
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K +L SGG DSS L+
Sbjct: 82 KPLRVAVLLSGGVDSSVALALLRAAGHECRAF 113
>gi|52548479|gb|AAU82328.1| PP-ATPase subunit of GMP synthase [uncultured archaeon GZfos14B8]
Length = 310
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 36/189 (19%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DS+ C DR+ + D G + E E ++M +K
Sbjct: 23 KAVIAVSGGVDSTVCAVLTHRAVGDRLVAVFIDDGLMREGEAE----------QVMNFFK 72
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ A K + + RN F A +
Sbjct: 73 ARNMNARQVDAANEFF----DALKGIVDPEEKRKA------FRNT-FYSVLARVVREENA 121
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAI----ETAINLGME---SHVTVHTPLMWLKKYETW 181
+V G D + +T++ I +G++ +T+ PL + K E
Sbjct: 122 NCLVQGTIAADVA-------ETVKGIKTQHNILEQIGIDPGSYGLTIVEPLREIYKPEVR 174
Query: 182 KLAQDIGGQ 190
++A+ G
Sbjct: 175 EVARSFGVP 183
>gi|326570757|gb|EGE20782.1| NAD+ synthetase [Moraxella catarrhalis BC1]
gi|326573020|gb|EGE22996.1| NAD+ synthetase [Moraxella catarrhalis CO72]
gi|326573542|gb|EGE23505.1| NAD+ synthetase [Moraxella catarrhalis 101P30B1]
Length = 563
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D DRV + Y ++ LE ++
Sbjct: 303 KGVIVGLSGGIDSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARL 356
>gi|320333553|ref|YP_004170264.1| argininosuccinate synthase [Deinococcus maricopensis DSM 21211]
gi|319754842|gb|ADV66599.1| Argininosuccinate synthase [Deinococcus maricopensis DSM 21211]
Length = 409
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 8 APSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELM 64
P +L +SGG D+S L W +R V + D GQ ++VE E R+ +
Sbjct: 3 KPKIVLAYSGGLDTSIILKWLQTERGYDVVAFTADLGQGDEVE-EARVKALNTGAVSAHA 61
Query: 65 PKWKDSLGEDHILPLAILGDI 85
++ D++ P+ G +
Sbjct: 62 LDLREEFVRDYVYPMFRTGAL 82
>gi|288957052|ref|YP_003447393.1| argininosuccinate synthase [Azospirillum sp. B510]
gi|288909360|dbj|BAI70849.1| argininosuccinate synthase [Azospirillum sp. B510]
Length = 411
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK 58
M+ K ++L +SGG D+S L W + + V T + D GQ ELE +
Sbjct: 1 MSGASGKQIKKVVLAYSGGLDTSVILKWLQETYSCEVVTFTADLGQ--GEELEPARKKAE 58
Query: 59 KI 60
+
Sbjct: 59 LL 60
>gi|237750144|ref|ZP_04580624.1| argininosuccinate synthase [Helicobacter bilis ATCC 43879]
gi|229374331|gb|EEO24722.1| argininosuccinate synthase [Helicobacter bilis ATCC 43879]
Length = 401
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 24/134 (17%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
+L +SGG D+S L W D + V T + D GQ +VE ++ I +
Sbjct: 4 KKVVLAYSGGLDTSVILKWLGDNYNCEVVTFTADIGQGEEVEPARAKALKLGIKSENIFI 63
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---AT 121
++ +D + P+ I ++ + A
Sbjct: 64 EDLREEFIKDFVFPMFRANTIYEGEYLLGTSIARP-----------------LIAKRLVE 106
Query: 122 LAYRLGITNIVIGV 135
+A +G + G
Sbjct: 107 IAKAVGADAVAHGA 120
>gi|319791106|ref|YP_004152746.1| tRNA (5-methylaminomethyL-2-thiouridylate)-methyltransferase
[Variovorax paradoxus EPS]
gi|315593569|gb|ADU34635.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Variovorax paradoxus EPS]
Length = 366
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 6/31 (19%), Positives = 11/31 (35%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + V +
Sbjct: 3 KQRIVVGLSGGVDSAVTAHLLKQQGHEVVGI 33
>gi|297620680|ref|YP_003708817.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Waddlia chondrophila WSU 86-1044]
gi|297375981|gb|ADI37811.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Waddlia chondrophila WSU 86-1044]
Length = 354
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DS+ + V L
Sbjct: 1 MSRTVVVGLSGGVDSAVAALLLKQQGYSVIGL 32
>gi|237749060|ref|ZP_04579540.1| tRNA-specific 2-thiouridylase mnmA [Oxalobacter formigenes
OXCC13]
gi|229380422|gb|EEO30513.1| tRNA-specific 2-thiouridylase mnmA [Oxalobacter formigenes
OXCC13]
Length = 367
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKKKVVIGMSGGVDSSVSAWLLKEQGYEVVGL 33
>gi|317154023|ref|YP_004122071.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfovibrio aespoeensis Aspo-2]
gi|316944274|gb|ADU63325.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfovibrio aespoeensis Aspo-2]
Length = 349
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 8/71 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+A+ + SGG DS L+ V + + L K I L
Sbjct: 2 KTAVAV-SGGMDSLLALALMRAGGHEVLAV-------HGRFLPSGPDSDKAIAGLAEACA 53
Query: 69 DSLGEDHILPL 79
H+ L
Sbjct: 54 RLGVPLHVADL 64
>gi|32490853|ref|NP_871107.1| hypothetical protein WGLp104 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|30173418|sp|Q8D397|MNMA_WIGBR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|25166059|dbj|BAC24250.1| ycfB [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 368
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS + VE +
Sbjct: 1 MNKKKKVIIAISGGVDSSVSAWFLKKSGYHVEGV 34
>gi|332796243|ref|YP_004457743.1| ATP binding protein [Acidianus hospitalis W1]
gi|332693978|gb|AEE93445.1| ATP binding protein [Acidianus hospitalis W1]
Length = 222
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+L+SGG+DS+ L WA+ + V +L
Sbjct: 5 VLYSGGKDSTYALHWAVFKGFEVISL 30
>gi|326577687|gb|EGE27563.1| NAD+ synthetase [Moraxella catarrhalis O35E]
Length = 563
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D DRV + Y ++ LE ++
Sbjct: 303 KGVIVGLSGGIDSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARL 356
>gi|326564236|gb|EGE14470.1| NAD+ synthetase [Moraxella catarrhalis 46P47B1]
Length = 563
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D DRV + Y ++ LE ++
Sbjct: 303 KGVIVGLSGGIDSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARL 356
>gi|325479285|gb|EGC82381.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 367
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
KK ++ SGG DSS + V +
Sbjct: 4 KKDTKVVVGISGGVDSSVAALLLKEEGYDVVGI 36
>gi|254295358|ref|YP_003061381.1| argininosuccinate synthase [Hirschia baltica ATCC 49814]
gi|254043889|gb|ACT60684.1| argininosuccinate synthase [Hirschia baltica ATCC 49814]
Length = 414
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVEL-ECRLCVRK 58
M+ + +L +SGG D+S L W V T + D GQ EL R +
Sbjct: 1 MSLVTNPPKKVVLAYSGGLDTSIILKWLQTEFGCEVVTFTADLGQ--GEELGPARDKALQ 58
Query: 59 KIVELMPKWKDSLGEDHILP 78
++ + D L ED +
Sbjct: 59 LGIKEENIFIDDLREDFVRD 78
>gi|222444394|ref|ZP_03606909.1| hypothetical protein METSMIALI_00005 [Methanobrevibacter smithii
DSM 2375]
gi|222433959|gb|EEE41124.1| hypothetical protein METSMIALI_00005 [Methanobrevibacter smithii
DSM 2375]
Length = 312
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE 51
A++ SGG DSS C + D + + D+G + E+E
Sbjct: 26 EKAIIALSGGVDSSVCSVLVQEAIGDNLIAIFVDHGLLREGEVE 69
>gi|163758298|ref|ZP_02165386.1| putative LPS biosynthesis protein WbpG [Hoeflea phototrophica
DFL-43]
gi|162284587|gb|EDQ34870.1| putative LPS biosynthesis protein WbpG [Hoeflea phototrophica
DFL-43]
Length = 360
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 24/141 (17%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K ++ SGG DS+ R + D G EL + K
Sbjct: 54 KPYDCVIGVSGGVDSTYVAWLVKKLGLRPLAVHLDNG--WNSELAVAN---------IEK 102
Query: 67 WKDSLGED---HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
++LG D H+L ++ SS K + VP + IF LA
Sbjct: 103 TLNTLGIDLYTHVLNWEEFRNL-QSSFLKASTPDGE--------VPTDHAIF-ALLYELA 152
Query: 124 YRLGITNIVIGVCETDYSGYP 144
+ G+ +++ G + P
Sbjct: 153 AKHGLKHVITGTNVVSEAILP 173
>gi|160888582|ref|ZP_02069585.1| hypothetical protein BACUNI_00999 [Bacteroides uniformis ATCC
8492]
gi|156861896|gb|EDO55327.1| hypothetical protein BACUNI_00999 [Bacteroides uniformis ATCC
8492]
Length = 350
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+K LL SGG DSS + V ++F
Sbjct: 1 MKSDKRVLLGMSGGTDSSVAAMRLQEAGYEVTGVTFR 37
>gi|148642405|ref|YP_001272918.1| GMP synthase subunit B [Methanobrevibacter smithii ATCC 35061]
gi|261351056|ref|ZP_05976473.1| GMP synthase [Methanobrevibacter smithii DSM 2374]
gi|148551422|gb|ABQ86550.1| GMP synthase (glutamine-hydrolysing), PP-ATPase domain/subunit,
GuaA [Methanobrevibacter smithii ATCC 35061]
gi|288860396|gb|EFC92694.1| GMP synthase [Methanobrevibacter smithii DSM 2374]
Length = 308
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE 51
A++ SGG DSS C + D + + D+G + E+E
Sbjct: 22 EKAIIALSGGVDSSVCSVLVQEAIGDNLIAIFVDHGLLREGEVE 65
>gi|332157672|ref|YP_004422951.1| hypothetical protein PNA2_0030 [Pyrococcus sp. NA2]
gi|331033135|gb|AEC50947.1| hypothetical protein PNA2_0030 [Pyrococcus sp. NA2]
Length = 427
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+A++ +SGG+DS+ L A FD V +
Sbjct: 232 KTAIVPWSGGKDSTAALILASKVFDEVTAV 261
>gi|326569726|gb|EGE19776.1| NAD+ synthetase [Moraxella catarrhalis BC8]
Length = 563
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D DRV + Y ++ LE ++
Sbjct: 303 KGVIVGLSGGIDSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARL 356
>gi|313113898|ref|ZP_07799457.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623777|gb|EFQ07173.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 367
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
P AL+ SGG DSS ++
Sbjct: 8 SKPRALIAMSGGVDSSVAAWLMQQAGYDCTGITMR 42
>gi|296112564|ref|YP_003626502.1| NAD+ synthetase [Moraxella catarrhalis RH4]
gi|295920258|gb|ADG60609.1| NAD+ synthetase [Moraxella catarrhalis RH4]
gi|326571668|gb|EGE21683.1| NAD+ synthetase [Moraxella catarrhalis BC7]
Length = 563
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D DRV + Y ++ LE ++
Sbjct: 303 KGVIVGLSGGIDSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARL 356
>gi|289422484|ref|ZP_06424327.1| tRNA(Ile)-lysidine synthase [Peptostreptococcus anaerobius 653-L]
gi|289157056|gb|EFD05678.1| tRNA(Ile)-lysidine synthase [Peptostreptococcus anaerobius 653-L]
Length = 462
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 46/145 (31%), Gaps = 32/145 (22%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
N++I++ ++ SGG DS L L RV + + +++ R
Sbjct: 13 NNMIEEGDRIIVGLSGGPDSVCLLHVLHRLSLKMNIRVYAVHLN----HQI----RGLDA 64
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN---II 114
+ K LG + + + ++D RN +I
Sbjct: 65 HLDALYVSKLCHKLGIACFIRSIDVPKYC-----SENGLGLEDG--------ARNLRYMI 111
Query: 115 FLVFAATLAYRLGITNIVIGVCETD 139
F R+G I +G + D
Sbjct: 112 FKEVK----DRIGANKIAVGHNKND 132
>gi|291087075|ref|ZP_06571794.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
sp. M62/1]
gi|291076393|gb|EFE13757.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
sp. M62/1]
Length = 391
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 61/199 (30%), Gaps = 29/199 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIV 61
+ A+LL SGG DS R +E F + +K +
Sbjct: 175 PVGTNGKAMLLLSGGIDSPVAGYMIAKRGVIIEATYF-----HAPPYTSERAKQKVIDLA 229
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+++ ++ + + I I + + + ++ + A
Sbjct: 230 KIVARYSGPIKLHVVNFTDIQLYIYDKCPHEELTIIMRRY-------------MMKIAEE 276
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+A + ++ G + T+ ++ + + V P++ K +
Sbjct: 277 IAKKDECLGLITGESIGQVAS------QTVHSLAVTNEVCT---LPVFRPVIGFDKQDIV 327
Query: 182 KLAQDIGGQDLVNLILEES 200
++Q IG + E+
Sbjct: 328 DISQKIGTFETSIQPYEDC 346
>gi|187932106|ref|YP_001892091.1| glutamine amidotransferase/asparagine synthase [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187713015|gb|ACD31312.1| glutamine amidotransferase/asparagine synthase [Francisella
tularensis subsp. mediasiatica FSC147]
Length = 628
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 15 FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+ ++ D++ T S + Q+ E E V K I
Sbjct: 271 LSGGIDSTAVVALMQSMSKDKINTFSIGFNQKEYNEAEHARAVAKHI 317
>gi|168334597|ref|ZP_02692750.1| hypothetical protein Epulo_06348 [Epulopiscium sp. 'N.t.
morphotype B']
Length = 267
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 15 FSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPK-WKD 69
FSGG DSS L A + + V ++F+ K +LE V +++ + + D
Sbjct: 20 FSGGVDSSLLLKVAAEEGKKLGVLVHAVTFETSLHPKADLEIAAKVAEEVGAIHKVIFID 79
Query: 70 SLGEDHILPLAI 81
L + I+ I
Sbjct: 80 ELTKAEIIENPI 91
>gi|91776061|ref|YP_545817.1| argininosuccinate synthase [Methylobacillus flagellatus KT]
gi|119361290|sp|Q1H0L1|ASSY_METFK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|91710048|gb|ABE49976.1| argininosuccinate synthase [Methylobacillus flagellatus KT]
Length = 406
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + V T + D GQ ELE ++ +
Sbjct: 1 MSDVNKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADIGQ--GEELEPAREKARQFG-V 57
Query: 64 MPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 58 KEIYIDDLREEFVRD 72
>gi|71033483|ref|XP_766383.1| GMP synthase [Theileria parva strain Muguga]
gi|68353340|gb|EAN34100.1| GMP synthase, putative [Theileria parva]
Length = 520
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYG-QRNKVELECRLCVRKKI 60
+ + SGG DS+ DR + D G R+ EC VRK++
Sbjct: 221 KNVVAALSGGVDSTVSAKMVQSVIGDRFHGVMVDTGLMRHNEIAECEKRVRKEV 274
>gi|302387387|ref|YP_003823209.1| asparagine synthase [Clostridium saccharolyticum WM1]
gi|302198015|gb|ADL05586.1| asparagine synthase [Clostridium saccharolyticum WM1]
Length = 276
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 15 FSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
FSGG DSS L A V ++FD +LE V K++ + +
Sbjct: 28 FSGGVDSSLLLKVAAEAAEKMGKTVYAVTFDSRLHPSCDLEIAARVAKELGGVHRVVSVN 87
Query: 71 LGEDHIL 77
E +
Sbjct: 88 ELEQKEI 94
>gi|300865976|ref|ZP_07110712.1| Asparagine synthase [Oscillatoria sp. PCC 6506]
gi|300336042|emb|CBN55870.1| Asparagine synthase [Oscillatoria sp. PCC 6506]
Length = 593
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+L SGG DSS + ++ +V S D+G EL V
Sbjct: 227 VLLSGGIDSSLVTALLVEAGLQVRAYSLDFGVEGYSELPYAQQVA 271
>gi|255013262|ref|ZP_05285388.1| putative cell-cycle protein [Bacteroides sp. 2_1_7]
Length = 438
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ + L+ SGG DS L + L ++ R + E + + E
Sbjct: 14 LLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGE-ESDRDEAFACEFAES 72
Query: 64 MPKWKDSLGEDHI 76
+ + D I
Sbjct: 73 LEVPFHKIDFDTI 85
>gi|225016206|ref|ZP_03705398.1| hypothetical protein CLOSTMETH_00109 [Clostridium methylpentosum
DSM 5476]
gi|224951028|gb|EEG32237.1| hypothetical protein CLOSTMETH_00109 [Clostridium methylpentosum
DSM 5476]
Length = 352
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 11/96 (11%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-----CRLCVRKKIVELMPKWKD 69
SGG DSS + +++ V +F R + C + +
Sbjct: 4 MSGGVDSSVAAALLIEQGYEVVGATF----RLWKPEDDLFDSEATCCSLDDINDAREVCH 59
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
LG H + L ++ +N + Q PN
Sbjct: 60 QLGIPHYV--LNLKREFKEAVVQNFVEEYQAGRTPN 93
>gi|119612005|gb|EAW91599.1| hCG1741694, isoform CRA_b [Homo sapiens]
Length = 158
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
+ S +L SGG D+S L W ++ V + GQ+ E + +
Sbjct: 1 MSSKGSMVLAHSGGLDTSCMLVWLKEQGHVVIAYLANIGQKEDFEKDRKKA 51
>gi|114326927|ref|YP_744084.1| argininosuccinate synthase [Granulibacter bethesdensis CGDNIH1]
gi|119361278|sp|Q0BVJ1|ASSY_GRABC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|114315101|gb|ABI61161.1| argininosuccinate synthase [Granulibacter bethesdensis CGDNIH1]
Length = 416
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K +L +SGG D+S L W + V T + D GQ ++E R + E
Sbjct: 9 AVKDVKKVVLAYSGGLDTSVILRWLQTTYNCEVVTFTADLGQGEELEPARRKAEMFGVKE 68
Query: 63 LM-PKWKDSLGEDHILPL 79
+ +++ +D + P+
Sbjct: 69 IFVDDLRETFVKDFVFPM 86
>gi|84389775|ref|ZP_00991327.1| Cell cycle protein MesJ [Vibrio splendidus 12B01]
gi|84376876|gb|EAP93750.1| Cell cycle protein MesJ [Vibrio splendidus 12B01]
Length = 444
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 12/70 (17%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+N K ++ FSGG DS L A Y Q + +E C + V +
Sbjct: 12 LNQSALKPNRLIVAFSGGVDSRVLLELAAQ-----------YAQTHGIEC-CAVHVHHGL 59
Query: 61 VELMPKWKDS 70
+ W +
Sbjct: 60 SKNADHWAEQ 69
>gi|262306065|gb|ACY45625.1| gln amidotransferase [Limnadia lenticularis]
Length = 193
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSW---ALDRFD---RVETLSFDYG 43
+ + + L+L SGG DS+ C + AL + RV+ + D G
Sbjct: 40 TVGRDKTILMLVSGGVDSAVCAALLHKALSDGEDNSRVQAVHIDNG 85
>gi|262381387|ref|ZP_06074525.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262296564|gb|EEY84494.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 438
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ + L+ SGG DS L + L ++ R + E + + E
Sbjct: 14 LLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGE-ESDRDEAFACEFAES 72
Query: 64 MPKWKDSLGEDHI 76
+ + D I
Sbjct: 73 LEVPFHKIDFDTI 85
>gi|261821429|ref|YP_003259535.1| tRNA-specific 2-thiouridylase MnmA [Pectobacterium wasabiae
WPP163]
gi|261605442|gb|ACX87928.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pectobacterium wasabiae WPP163]
Length = 368
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYHVEGL 36
>gi|237749187|ref|ZP_04579667.1| argininosuccinate synthase [Oxalobacter formigenes OXCC13]
gi|229380549|gb|EEO30640.1| argininosuccinate synthase [Oxalobacter formigenes OXCC13]
Length = 407
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELE-CRLCVRKKIVE 62
+ +L +SGG D+S L W D + V T + D GQ EL+ R K ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQ--GEELDPARQKALKFGIK 58
Query: 63 LMPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 59 PENIFIDDLREEFVRD 74
>gi|227111563|ref|ZP_03825219.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
gi|227327064|ref|ZP_03831088.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 368
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYHVEGL 36
>gi|298529721|ref|ZP_07017124.1| GMP synthase, large subunit [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511157|gb|EFI35060.1| GMP synthase, large subunit [Desulfonatronospira thiodismutans
ASO3-1]
Length = 516
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ-RNKVELECRLCVRKKI 60
++I + SGG DS+ R+ + D G R+ LE + K
Sbjct: 214 EMIPDDEQVVCGLSGGIDSTVVAVLLHKAIGKRLHCILVDNGVLRHNEALEVVESLTKHF 273
>gi|160915329|ref|ZP_02077542.1| hypothetical protein EUBDOL_01338 [Eubacterium dolichum DSM 3991]
gi|158433128|gb|EDP11417.1| hypothetical protein EUBDOL_01338 [Eubacterium dolichum DSM 3991]
Length = 387
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 10/31 (32%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
LL SGG DS+ + V
Sbjct: 2 MKQKVLLGLSGGVDSAVAAYLLKEAGYDVTC 32
>gi|24214187|ref|NP_711668.1| tRNA-specific 2-thiouridylase MnmA [Leptospira interrogans serovar
Lai str. 56601]
gi|59799068|sp|Q8F625|MNMA_LEPIN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|24195088|gb|AAN48686.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptospira interrogans serovar Lai str. 56601]
Length = 375
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 10/130 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DS+ ++ V + +++Y + C + I +
Sbjct: 5 KIIVAMSGGVDSAVTAGLLMEDGYEVIGVNLRTWEYEAPACDTTKKSCCSPEDIRDARDV 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--AY 124
+++ + + + Q PN V N F+ F A A
Sbjct: 65 GISLKIPFYVIK---MEKVFQEKVIDRFIEDYQHGKTPNPCVEC-NT-FVKFGALFEKAK 119
Query: 125 RLGITNIVIG 134
LGI I G
Sbjct: 120 ALGIDKIATG 129
>gi|73920128|sp|Q72Q44|MNMA_LEPIC RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 375
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 10/130 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DS+ ++ V + +++Y + C + I +
Sbjct: 5 KIIVAMSGGVDSAVTAGLLMEDGYEVIGVNLRTWEYEAPACDTTKKSCCSPEDIRDARDV 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--AY 124
+++ + + + Q PN V N F+ F A A
Sbjct: 65 GISLKIPFYVIK---MEKVFQEKVIDRFIEDYQHGKTPNPCVEC-NT-FVKFGALFEKAK 119
Query: 125 RLGITNIVIG 134
LGI I G
Sbjct: 120 ALGIDKIATG 129
>gi|57640885|ref|YP_183363.1| asparagine synthase (glutamine-hydrolyzing) [Thermococcus
kodakarensis KOD1]
gi|57159209|dbj|BAD85139.1| asparagine synthase (glutamine-hydrolyzing) [Thermococcus
kodakarensis KOD1]
Length = 483
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 21/132 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+LFSGG DS+ A ++ V + G + ++E V W
Sbjct: 247 VLFSGGLDSTLVAYLA-SQYSDVILYTA--GTEDSPDIEWARKVADHFG-----WALRER 298
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ + ++ + M + LP L FA+ LA G ++
Sbjct: 299 TFEVEDVRDAVKRVMYAIEEPNPMNLA-IGLP-----------LYFASGLASSDGTRVLL 346
Query: 133 IGVCETD-YSGY 143
G + + GY
Sbjct: 347 SGQGADELFGGY 358
>gi|332879718|ref|ZP_08447409.1| sulfate adenylyltransferase, small subunit [Capnocytophaga sp.
oral taxon 329 str. F0087]
gi|332682345|gb|EGJ55251.1| sulfate adenylyltransferase, small subunit [Capnocytophaga sp.
oral taxon 329 str. F0087]
Length = 299
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCV 56
M ++ + LLFSGG+DS T + A+ F ++ + D G L+ R +
Sbjct: 17 MREVAAQFERPALLFSGGKDSITLVHLAIKAFAPMKIPFPLVHIDTGHNFPEALQYRDAL 76
Query: 57 RKKIVELM 64
K+I +
Sbjct: 77 AKRIGAEL 84
>gi|291288175|ref|YP_003504991.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Denitrovibrio acetiphilus DSM 12809]
gi|290885335|gb|ADD69035.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Denitrovibrio acetiphilus DSM 12809]
Length = 344
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DS+ ++ V +
Sbjct: 1 MKEKVLIAMSGGVDSTLTAHIMKEKGYDVIGCTI 34
>gi|256840787|ref|ZP_05546295.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298376612|ref|ZP_06986567.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_1_19]
gi|256738059|gb|EEU51385.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298266490|gb|EFI08148.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_1_19]
Length = 438
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ + L+ SGG DS L + L ++ R + E + + E
Sbjct: 14 LLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGE-ESDRDEAFACEFAES 72
Query: 64 MPKWKDSLGEDHI 76
+ + D I
Sbjct: 73 LEVPFHKIDFDTI 85
>gi|253688256|ref|YP_003017446.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259495833|sp|C6DFW7|MNMA_PECCP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|251754834|gb|ACT12910.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 368
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYHVEGL 36
>gi|242373921|ref|ZP_04819495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis M23864:W1]
gi|242348475|gb|EES40077.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus epidermidis M23864:W1]
Length = 372
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 7 RVVVGMSGGVDSSVTAYLLKEQGYDVIGI 35
>gi|150008036|ref|YP_001302779.1| putative cell-cycle protein [Parabacteroides distasonis ATCC
8503]
gi|226695544|sp|A6LBU3|TILS_PARD8 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|149936460|gb|ABR43157.1| putative cell-cycle protein [Parabacteroides distasonis ATCC
8503]
Length = 438
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ + L+ SGG DS L + L ++ R + E + + E
Sbjct: 14 LLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGE-ESDRDEAFACEFAES 72
Query: 64 MPKWKDSLGEDHI 76
+ + D I
Sbjct: 73 LEVPFHKIDFDTI 85
>gi|149183668|ref|ZP_01862082.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bacillus sp. SG-1]
gi|148848616|gb|EDL62852.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bacillus sp. SG-1]
Length = 155
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETL 38
+KK P ++ SGG DSS ++ V +
Sbjct: 1 MKKEPKDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|116753546|ref|YP_842664.1| GMP synthase subunit B [Methanosaeta thermophila PT]
gi|116664997|gb|ABK14024.1| GMP synthase (glutamine-hydrolyzing) [Methanosaeta thermophila PT]
Length = 302
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 70/189 (37%), Gaps = 35/189 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A++ SGG DSS C A + + + D G + E E +IVEL
Sbjct: 21 KAIIALSGGVDSSVCAVLAHRALGENLVPVYVDSGLMRRFESE-------RIVELFS--- 70
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + ++L + + + TF+ R +F A+ +G
Sbjct: 71 -----HLNLMKVDASERFLNALRGVTDPEQKRKIIGETFI--R--VFEEVAS----EVGA 117
Query: 129 TNIVIGVCETDYSGYPDCRHDT---IRAIETAINLGMESHVT-VHTPLMWLKKYETWKLA 184
++ G + YPD R ++ I++ L + + P+ L K E ++A
Sbjct: 118 EYLIQG------TIYPD-RIESEGGIKSHHNVGGLPLHIEFKGIIEPMRDLYKDEVREVA 170
Query: 185 QDIGGQDLV 193
+ +G +
Sbjct: 171 RALGLPMEI 179
>gi|75676987|ref|YP_319408.1| argininosuccinate synthase [Nitrobacter winogradskyi Nb-255]
gi|119361299|sp|Q3SNT5|ASSY_NITWN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|74421857|gb|ABA06056.1| argininosuccinate synthase [Nitrobacter winogradskyi Nb-255]
Length = 409
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 24/139 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ KK +L +SGG D+S L W + V T + D GQ ++E R I +
Sbjct: 1 MSKKVQKVVLAYSGGLDTSIILKWLQTTYGAEVVTFTADLGQGEELEPARRKAQLLGIKD 60
Query: 63 ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ ++ D++ P+ + ++ + A
Sbjct: 61 ENIFIEDLREEFVRDYVFPMFRANAVYEGQYLLGTSIARP-----------------LIA 103
Query: 120 ---ATLAYRLGITNIVIGV 135
+A ++G + G
Sbjct: 104 KKQIEIAEKVGADAVAHGA 122
>gi|119357136|ref|YP_911780.1| argininosuccinate synthase [Chlorobium phaeobacteroides DSM 266]
gi|166219960|sp|A1BG29|ASSY_CHLPD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|119354485|gb|ABL65356.1| argininosuccinate synthase [Chlorobium phaeobacteroides DSM 266]
Length = 400
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVE 62
+ K A+ SGG D+S + W D++D + ++ + GQ+ ++E LE +
Sbjct: 1 MSKEKIAIAY-SGGLDTSIMIKWLKDKYDAEIVAVTGNLGQQKEIENLESKAIATGASAF 59
Query: 63 LMPKWKDSLGEDHI 76
+ E++I
Sbjct: 60 QFVDLRKEFVEEYI 73
>gi|332796791|ref|YP_004458291.1| argininosuccinate synthase [Acidianus hospitalis W1]
gi|332694526|gb|AEE93993.1| Argininosuccinate synthase [Acidianus hospitalis W1]
Length = 392
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
+L +SGG D++ + W +++ V T+S D GQ+ +LE R +
Sbjct: 2 KIVLAYSGGLDTTVSIRWLKEKYQADVITVSVDVGQKEDFKKLEERAYIAGSSKHYTIDA 61
Query: 68 KDSLGEDHI 76
K+ E +
Sbjct: 62 KEEFVEKFV 70
>gi|330828858|ref|YP_004391810.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Aeromonas veronii B565]
gi|328803994|gb|AEB49193.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Aeromonas veronii B565]
Length = 368
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 48/154 (31%), Gaps = 40/154 (25%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELMPKWK 68
++ SGG DSS + +VE L +N E + C + +
Sbjct: 8 KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDTDEYCSAAQDLADAKAVC 63
Query: 69 DSLG----------------EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
D LG +H L G + + N +K +
Sbjct: 64 DKLGMKLHTINFAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKA------------ 111
Query: 113 IIFLVFAATLAYRLGITNIVIG--VCETDYSGYP 144
FL FA A LG T I G V D +G P
Sbjct: 112 --FLEFA---AEELGATYIATGHYVRRDDSTGRP 140
>gi|223044127|ref|ZP_03614166.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus capitis SK14]
gi|314933788|ref|ZP_07841153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus caprae C87]
gi|222442521|gb|EEE48627.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus capitis SK14]
gi|313653938|gb|EFS17695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus caprae C87]
Length = 372
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHLLKEQGYDVIGI 35
>gi|157813152|gb|ABV81321.1| putative GMP synthetase [Triops longicaudatus]
Length = 197
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYG 43
L+L SGG DS+ C + +V + D G
Sbjct: 44 KQVLMLVSGGVDSTVCAALLHKALPQQQVIAVHIDNG 80
>gi|154496175|ref|ZP_02034871.1| hypothetical protein BACCAP_00459 [Bacteroides capillosus ATCC
29799]
gi|150274730|gb|EDN01794.1| hypothetical protein BACCAP_00459 [Bacteroides capillosus ATCC
29799]
Length = 342
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 37/133 (27%), Gaps = 16/133 (12%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DS+ + L R V L D G + + + + +
Sbjct: 4 LSGGVDSAV-AAQLLSRDYEVHGLYLDIGLGGTGQADAAA-----VAHRLDIPFHTADIR 57
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
L + G + L + N P P LA +G + G
Sbjct: 58 QELENQVCGPFAADYLAGRTPLPCARCN-PTVKFPA--------LLALAEEIGAEKVATG 108
Query: 135 VCETDYSGYPDCR 147
+ PD R
Sbjct: 109 -HYARTALAPDGR 120
>gi|119486285|ref|ZP_01620344.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lyngbya sp. PCC 8106]
gi|119456498|gb|EAW37628.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lyngbya sp. PCC 8106]
Length = 352
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + + V L+
Sbjct: 2 KKVVVGLSGGVDSSAAAAILHHQDYEVVGLT 32
>gi|56461233|ref|YP_156514.1| thiamine biosynthesis protein ThiI [Idiomarina loihiensis L2TR]
gi|56180243|gb|AAV82965.1| Thiamine biosynthesis protein ThiI [Idiomarina loihiensis L2TR]
Length = 483
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 59/197 (29%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I + L L SGG DS + R R F+ G + ++I
Sbjct: 175 PIPTQETVLSLLSGGFDSGVATYDFIRRGARTHFCFFNLGG------DAHEVAVRQIAYY 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ K S + + + ++ + + + V R L A +A
Sbjct: 229 LWKRYSSSHPIKFISVDFAP------IVDDILTNVDNGQMG--VVLKRQ--MLRAADKVA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
+ +V G S + + + + V PL+ K E
Sbjct: 279 RYVKAQALVTGEAMGQVSS---------QTLSNLRVIDQATSALVLRPLITKDKQEIVDE 329
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG + L I E
Sbjct: 330 AKRIGTEPLAKSIPEYC 346
>gi|50121369|ref|YP_050536.1| tRNA-specific 2-thiouridylase MnmA [Pectobacterium atrosepticum
SCRI1043]
gi|71658013|sp|Q6D4E9|MNMA_ERWCT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|49611895|emb|CAG75344.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pectobacterium atrosepticum SCRI1043]
Length = 368
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYHVEGL 36
>gi|49474667|ref|YP_032709.1| hypothetical protein BQ11760 [Bartonella quintana str. Toulouse]
gi|61216506|sp|Q6FYQ5|TILS_BARQU RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|49240171|emb|CAF26635.1| hypothetical protein BQ11760 [Bartonella quintana str. Toulouse]
Length = 476
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD------RVETLSFDYGQR----NKVELECRLCV 56
+ +L SGG DS L D + ++ D+ R + E +C
Sbjct: 17 QCRKVILAVSGGSDSLALLFLVKDHLKTFSIPTEIIVVTVDHQLRRESACEAESVAEICR 76
Query: 57 RKKIVELMPKWKDSLGEDHIL 77
I ++ +W+ + HI+
Sbjct: 77 AHHIQHVIVRWEGKKPKTHII 97
>gi|116754862|ref|YP_843980.1| hypothetical protein Mthe_1570 [Methanosaeta thermophila PT]
gi|116666313|gb|ABK15340.1| conserved hypothetical ATP-binding protein [Methanosaeta
thermophila PT]
Length = 199
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
LFSGG+DS FD +E ++F +GQ E+ R
Sbjct: 6 LFSGGKDSGLTAILLEPFFDEIELVTFSFGQDRAWEVAARAARA 49
>gi|307293549|ref|ZP_07573393.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingobium chlorophenolicum L-1]
gi|306879700|gb|EFN10917.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sphingobium chlorophenolicum L-1]
Length = 376
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 35/128 (27%), Gaps = 4/128 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
A ++ SGG DSS + A ++ Y V C + I +
Sbjct: 21 ARRIVVAMSGGVDSSVVAALAARTGAETIGVTLQLYDHGAAVGRTGSCCAGQDIRDARAV 80
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
++ S+ + A + P V + +A L
Sbjct: 81 ADRIGIAHYVFD---YESRFRESVIADFADEYMAGRTPIPCVKCNMGVKFTDLFQIARDL 137
Query: 127 GITNIVIG 134
G + G
Sbjct: 138 GADCLATG 145
>gi|258542584|ref|YP_003188017.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-01]
gi|256633662|dbj|BAH99637.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-01]
gi|256636721|dbj|BAI02690.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-03]
gi|256639774|dbj|BAI05736.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-07]
gi|256642830|dbj|BAI08785.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-22]
gi|256645885|dbj|BAI11833.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-26]
gi|256648938|dbj|BAI14879.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-32]
gi|256651925|dbj|BAI17859.1| argininosuccinate synthase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654982|dbj|BAI20909.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-12]
Length = 413
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 22/135 (16%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W + + V T + D GQ ++E + + E+
Sbjct: 8 KDVKKVVLAYSGGLDTSVILRWLQNTYGCEVVTFTADLGQGEELEPARKKAEMFGVKEIF 67
Query: 65 -PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---A 120
+++ +D + P+ + ++ + A
Sbjct: 68 VEDLRETFVKDFVFPMFRANTLYEGQYLLGTSIARP-----------------LIAQRQI 110
Query: 121 TLAYRLGITNIVIGV 135
+A +G + G
Sbjct: 111 EIAEAVGADAVAHGA 125
>gi|238809910|dbj|BAH69700.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 382
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
I +L SGG DSS L + VE L
Sbjct: 9 INMHKKKVILGMSGGVDSSVAAYLLLQQGYDVEGL 43
>gi|220929349|ref|YP_002506258.1| tRNA-specific 2-thiouridylase MnmA [Clostridium cellulolyticum H10]
gi|219999677|gb|ACL76278.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium cellulolyticum H10]
Length = 359
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 18/136 (13%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMP 65
+ +L SGG DSS + L + V ++ Q E C V+
Sbjct: 3 SKKVMLGMSGGVDSSVAAAILLRQGYEVIGVTLQIWQDMDEERRKSEGGCCSLSAVDDAR 62
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFLVF 118
+ + LG + + DI ++ + + PN P R++ L
Sbjct: 63 RVANKLGIPYYV--LNFKDIFSKTVIEYFKEEYFKGRTPN---PCIACNRHVKWQAMLDK 117
Query: 119 AATLAYRLGITNIVIG 134
A + +GI I G
Sbjct: 118 ALS----MGIDYIATG 129
>gi|104783178|ref|YP_609676.1| cell cycle protein MesJ [Pseudomonas entomophila L48]
gi|95112165|emb|CAK16892.1| putative cell cycle protein MesJ [Pseudomonas entomophila L48]
Length = 431
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 18/58 (31%), Gaps = 11/58 (18%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+ FSGG DS+ L DY + + + V + W D
Sbjct: 19 VAFSGGLDSTVLLHLLA-----------DYARHHPAPPLRAIHVHHGLQAAADAWPDH 65
>gi|330723585|gb|AEC45955.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma hyorhinis MCLD]
Length = 370
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V +
Sbjct: 3 KVVIGMSGGVDSSVAAYLLKQQGYEVIGV 31
>gi|330448276|ref|ZP_08311924.1| NH(3)-dependent NAD(+) synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492467|dbj|GAA06421.1| NH(3)-dependent NAD(+) synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 278
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 65/205 (31%), Gaps = 38/205 (18%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC--LSWALDRF---------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC L+ + + YG Q+++ E
Sbjct: 31 KLKQSGCKSLVLGISGGVDSTTCGRLAQLAIDGLNTETNTNDYQFIAVRLPYGEQQDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L K + KD + H L L + + + N+
Sbjct: 91 AQLALRFIKPSHSVSVNIKDGVDGTHASTLFAL-EGTGLIPADEAKVDFVKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
R + + I +V G V TD+S +
Sbjct: 145 AR-TRMIA-------QYEIAGLVGGLVLGTDHSA--ENITGFYTKF--------GDGACD 186
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + K+A +G + +
Sbjct: 187 LAPLFGLNKRQVRKVAAKLGAPEQL 211
>gi|304372837|ref|YP_003856046.1| tRNA-specific 2-thiouridylase mnmA [Mycoplasma hyorhinis HUB-1]
gi|304309028|gb|ADM21508.1| tRNA-specific 2-thiouridylase mnmA [Mycoplasma hyorhinis HUB-1]
Length = 370
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V +
Sbjct: 3 KVVIGMSGGVDSSVAAYLLKQQGYEVIGV 31
>gi|281412457|ref|YP_003346536.1| argininosuccinate synthase [Thermotoga naphthophila RKU-10]
gi|281373560|gb|ADA67122.1| argininosuccinate synthase [Thermotoga naphthophila RKU-10]
Length = 409
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
+L +SGG D+S L W ++ V + GQ+
Sbjct: 1 MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 39
>gi|253989217|ref|YP_003040573.1| tRNA -specific 2-thiouridylase MnmA [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253780667|emb|CAQ83829.1| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photorhabdus asymbiotica]
Length = 367
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|227499265|ref|ZP_03929377.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaerococcus tetradius ATCC 35098]
gi|227218674|gb|EEI83905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaerococcus tetradius ATCC 35098]
Length = 367
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
KK ++ SGG DSS + V +
Sbjct: 4 KKDTKVVVGISGGVDSSVAALLLKEEGYDVVGI 36
>gi|224074941|ref|XP_002304500.1| predicted protein [Populus trichocarpa]
gi|222841932|gb|EEE79479.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
ND + + SGG DS+ + DR+ + D G
Sbjct: 221 NDAVGPEEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNG 263
>gi|209526894|ref|ZP_03275413.1| Asparagine synthase (glutamine-hydrolyzing) [Arthrospira maxima
CS-328]
gi|209492673|gb|EDZ93009.1| Asparagine synthase (glutamine-hydrolyzing) [Arthrospira maxima
CS-328]
Length = 567
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 16/99 (16%)
Query: 14 LFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
SGG DSS + A V T S +G ELE V +
Sbjct: 239 YLSGGLDSSAITALASKFHQQEVHTYSIHFGAEYPNELEFANLVAEHCQ----------T 288
Query: 73 EDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPG 110
+ HIL + + ++T N+ I D P T VP
Sbjct: 289 QHHILEIQPETVWDNLAITMANLDDPIGD---PLT-VPN 323
>gi|170288837|ref|YP_001739075.1| argininosuccinate synthase [Thermotoga sp. RQ2]
gi|229889901|sp|B1LAP4|ASSY_THESQ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|170176340|gb|ACB09392.1| Argininosuccinate synthase [Thermotoga sp. RQ2]
Length = 409
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
+L +SGG D+S L W ++ V + GQ+
Sbjct: 1 MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 39
>gi|148270200|ref|YP_001244660.1| argininosuccinate synthase [Thermotoga petrophila RKU-1]
gi|166221028|sp|A5ILL1|ASSY_THEP1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|147735744|gb|ABQ47084.1| argininosuccinate synthase [Thermotoga petrophila RKU-1]
Length = 409
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
+L +SGG D+S L W ++ V + GQ+
Sbjct: 1 MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 39
>gi|52696139|pdb|1VL2|A Chain A, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
From Thermotoga Maritima At 1.65 A Resolution
gi|52696140|pdb|1VL2|B Chain B, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
From Thermotoga Maritima At 1.65 A Resolution
gi|52696141|pdb|1VL2|C Chain C, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
From Thermotoga Maritima At 1.65 A Resolution
gi|52696142|pdb|1VL2|D Chain D, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
From Thermotoga Maritima At 1.65 A Resolution
Length = 421
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
+L +SGG D+S L W ++ V + GQ+
Sbjct: 13 MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 51
>gi|15644525|ref|NP_229577.1| argininosuccinate synthase [Thermotoga maritima MSB8]
gi|24211540|sp|Q9X2A1|ASSY_THEMA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|4982360|gb|AAD36844.1|AE001816_1 argininosuccinate synthase [Thermotoga maritima MSB8]
Length = 409
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
+L +SGG D+S L W ++ V + GQ+
Sbjct: 1 MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 39
>gi|325001372|ref|ZP_08122484.1| argininosuccinate synthase [Pseudonocardia sp. P1]
Length = 474
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S ++W + + D GQ ++ +L + VR++ +E + +
Sbjct: 18 FSGGLDTSVAVAWMRENGAVPYAYTADLGQPDEPDL---VAVRERALEYGAESARVVDCR 74
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
L + I+ + I+ +P
Sbjct: 75 RALVDEGIAAIACGAF------HIRAGGMP 98
>gi|255264468|ref|ZP_05343810.1| argininosuccinate synthase [Thalassiobium sp. R2A62]
gi|255106803|gb|EET49477.1| argininosuccinate synthase [Thalassiobium sp. R2A62]
Length = 405
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARAKAELMGA 57
>gi|261346011|ref|ZP_05973655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Providencia rustigianii DSM 4541]
gi|282565896|gb|EFB71431.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Providencia rustigianii DSM 4541]
Length = 373
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 26/147 (17%)
Query: 1 MNDIIKKAPSA----LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
M+D K+ ++ ++ SGG DSS + +V L + + + C
Sbjct: 1 MSDNSTKSDNSQIKVIVGMSGGVDSSVSAYLLQQQGYQVVGLFMK---NWEEDDDEEYCS 57
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII-- 114
+ D LG + L I+ ++ + + P +I+
Sbjct: 58 AATDLADAQAVCDKLGIE-------LRTINFAAEYWDNVFEHFLEEYKAGRTPNPDILCN 110
Query: 115 -------FLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 111 KEIKFKAFLEFA---AEDLGADYIATG 134
>gi|225405420|ref|ZP_03760609.1| hypothetical protein CLOSTASPAR_04640 [Clostridium asparagiforme
DSM 15981]
gi|225043067|gb|EEG53313.1| hypothetical protein CLOSTASPAR_04640 [Clostridium asparagiforme
DSM 15981]
Length = 440
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
+ + +L +SGG D++T + W + V D GQ
Sbjct: 19 VFRMKEKVILAYSGGLDTTTIIPWLKENFGYEVICCCIDCGQ 60
>gi|229816665|ref|ZP_04446954.1| hypothetical protein COLINT_03714 [Collinsella intestinalis DSM
13280]
gi|229807793|gb|EEP43606.1| hypothetical protein COLINT_03714 [Collinsella intestinalis DSM
13280]
Length = 327
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
ALL SGG DSS + + + + ++G K E E + V + ++ +
Sbjct: 37 KKALLALSGGVDSSVVAALLIKAIGKQFICVHVNHGLMRKGESEQVVDVFRNQLDANLVY 96
Query: 68 KDSLGEDHIL 77
D++ L
Sbjct: 97 VDAIDRFLSL 106
>gi|148251855|ref|YP_001236440.1| argininosuccinate synthase [Bradyrhizobium sp. BTAi1]
gi|226729213|sp|A5E8P0|ASSY_BRASB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|146404028|gb|ABQ32534.1| argininosuccinate synthase [Bradyrhizobium sp. BTAi1]
Length = 445
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
M I+K K + FSGG D+S L W + R + + GQ
Sbjct: 1 MTTILKGLPKGEKVGIAFSGGLDTSAALLWMKQKGARCFAYTANLGQ 47
>gi|6978034|gb|AAF34252.1|AF168003_7 putative asparagine synthetase [Desulfovibrio gigas]
Length = 643
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 18/107 (16%)
Query: 13 LLFSGGQDSSTCLSWA--LDRFDRVETLSFD--------YGQR--------NKVELECRL 54
+ SGG DSS+ + A L + ++ F Y R +++EL
Sbjct: 271 VFLSGGVDSSSVAAMAGQLAPGIKTFSIGFTEASYDESAYAGRVAAQLGTDHQLELLSAD 330
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN 101
+ E++ ++ + + + I+P +L I+ +T + D
Sbjct: 331 ACADLLPEVVSRFDEPMADPSIVPTYLLSQITRRQVTVALGGDGPDE 377
>gi|15829029|ref|NP_326389.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma pulmonis UAB CTIP]
gi|24638329|sp|Q98Q11|MNMA_MYCPU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|14089973|emb|CAC13731.1| TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE
[Mycoplasma pulmonis]
Length = 371
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 3 KIVIGLSGGVDSSVAAYLLKQQGHEVIGL 31
>gi|326623649|gb|EGE29994.1| tRNA-specific 2-thiouridylase mnmA [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326628111|gb|EGE34454.1| tRNA-specific 2-thiouridylase mnmA [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 383
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 15 PMSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|320086325|emb|CBY96098.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 383
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 15 PMSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|291085497|ref|ZP_06353231.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Citrobacter youngae ATCC 29220]
gi|291071151|gb|EFE09260.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Citrobacter youngae ATCC 29220]
Length = 383
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 15 PMSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|270294933|ref|ZP_06201134.1| tRNA methyl transferase [Bacteroides sp. D20]
gi|270274180|gb|EFA20041.1| tRNA methyl transferase [Bacteroides sp. D20]
Length = 350
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+K LL SGG DSS + V ++F
Sbjct: 1 MKSDKRVLLGMSGGTDSSVAAMRLQEAGYEVTGVTFR 37
>gi|262403380|ref|ZP_06079940.1| NAD synthetase [Vibrio sp. RC586]
gi|262350879|gb|EEZ00013.1| NAD synthetase [Vibrio sp. RC586]
Length = 276
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 61/204 (29%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 31 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTSEYQFIAVRLPYGEQKDEAE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + T + N+
Sbjct: 91 AQLALSFIRPSHSVSVNIKAGVDGLHTASQHALANTGL-IPTDPAKIDFIKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + LA+ +G +
Sbjct: 188 APLYGLNKRQVRLLAETLGAPAQL 211
>gi|237731114|ref|ZP_04561595.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Citrobacter sp. 30_2]
gi|226906653|gb|EEH92571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Citrobacter sp. 30_2]
Length = 383
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 15 PMSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|162147641|ref|YP_001602102.1| argininosuccinate synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542270|ref|YP_002274499.1| argininosuccinate synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|189046390|sp|A9HIQ4|ASSY_GLUDA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|161786218|emb|CAP55800.1| Argininosuccinate synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|209529947|gb|ACI49884.1| Argininosuccinate synthase [Gluconacetobacter diazotrophicus PAl 5]
Length = 409
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 22/137 (16%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+K +L +SGG D+S L W + V T + D GQ ++E + + E
Sbjct: 2 AVKDVKKVVLAYSGGLDTSVILRWLQTTYGCEVVTFTADLGQGEELEPARKKAEMFGVKE 61
Query: 63 LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA-- 119
+ +++ +D + P+ + ++ + A
Sbjct: 62 IFVEDLRETFVKDFVFPMFRANTLYEGQYLLGTSIARP-----------------LIAQR 104
Query: 120 -ATLAYRLGITNIVIGV 135
+A +G + G
Sbjct: 105 QIEIAEAVGADAVAHGA 121
>gi|161503672|ref|YP_001570784.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865019|gb|ABX21642.1| hypothetical protein SARI_01756 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 383
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 15 PMSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|157146082|ref|YP_001453401.1| tRNA-specific 2-thiouridylase MnmA [Citrobacter koseri ATCC
BAA-895]
gi|157083287|gb|ABV12965.1| hypothetical protein CKO_01838 [Citrobacter koseri ATCC BAA-895]
Length = 383
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 15 PMSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|16419753|gb|AAL20163.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|261246446|emb|CBG24256.1| 5-methylaminomethyl-2-thiouridylate-methyltrans ferase EC
2.1.1.61 [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|323129504|gb|ADX16934.1| tRNA-specific 2-thiouridylase mnmA [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332988125|gb|AEF07108.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 383
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 15 PMSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|62127388|gb|AAX65091.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 383
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 15 PMSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|116492933|ref|YP_804668.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase,
PP-loop ATPase [Pediococcus pentosaceus ATCC 25745]
gi|122265603|sp|Q03EZ6|MNMA_PEDPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|116103083|gb|ABJ68226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pediococcus pentosaceus ATCC 25745]
Length = 377
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS + V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVVAYLLKQQGYDVVGV 36
>gi|288802304|ref|ZP_06407744.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella
melaninogenica D18]
gi|288335271|gb|EFC73706.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella
melaninogenica D18]
Length = 456
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 24/130 (18%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L + RVE + ++ R + L ++ + L
Sbjct: 22 LVALSGGADSVALLLCLKELGYRVEAVHCNFNLRGEESLRDE------------QFCEDL 69
Query: 72 GEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ +P + + + + V++++ L + F LG
Sbjct: 70 CQRENIPFHKVHFDTQAYADLHKVSIEMAARELRYRY-------FFQLK----EALGANG 118
Query: 131 IVIGVCETDY 140
+ +G + D
Sbjct: 119 VCVGHHKEDS 128
>gi|281411798|ref|YP_003345877.1| tRNA(Ile)-lysidine synthetase [Thermotoga naphthophila RKU-10]
gi|281372901|gb|ADA66463.1| tRNA(Ile)-lysidine synthetase [Thermotoga naphthophila RKU-10]
Length = 431
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 66/205 (32%), Gaps = 49/205 (23%)
Query: 12 LLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DS T L ++ D +++ R R+ + + +W
Sbjct: 26 LVAVSGGIDSMTLLYVLKKFSPLLKIKITAAHLD----HRIRESSRRD-REFVERICRQW 80
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + ++ D + + +A +++ + L T A ++G
Sbjct: 81 NVPVETSEVDVPSLWKDSGKT--LEEIARELRYDFLRRT----------------AKKVG 122
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
T I + + D + + + G P + K+
Sbjct: 123 ATKIALAHHKNDL----------LETVVHRLIRGTGPLGLACISPKREEFIRPFLVFKRS 172
Query: 179 ETWKLAQDIGGQDLVN---LILEES 200
E + A++ G +V+ ++ +
Sbjct: 173 EIEEYAREKGVPYVVDETNYDVKYT 197
>gi|222150837|ref|YP_002559990.1| argininosuccinate synthase [Macrococcus caseolyticus JCSC5402]
gi|222119959|dbj|BAH17294.1| argininosuccinate synthase [Macrococcus caseolyticus JCSC5402]
Length = 402
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W +++ V D G
Sbjct: 1 MHEKQKVVLAYSGGLDTSVAIQWLIEKGYEVIACCLDVG 39
>gi|152981022|ref|YP_001352063.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Janthinobacterium sp. Marseille]
gi|205816857|sp|A6SUW6|MNMA_JANMA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|151281099|gb|ABR89509.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Janthinobacterium sp. Marseille]
Length = 372
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KKRVVIGMSGGVDSSVSAWLLKEQGYEVIGL 33
>gi|148269484|ref|YP_001243944.1| tRNA(Ile)-lysidine synthetase [Thermotoga petrophila RKU-1]
gi|147735028|gb|ABQ46368.1| tRNA(Ile)-lysidine synthetase [Thermotoga petrophila RKU-1]
Length = 419
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 66/205 (32%), Gaps = 49/205 (23%)
Query: 12 LLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ SGG DS T L ++ D +++ R R+ + + +W
Sbjct: 14 LVAVSGGIDSMTLLYVLKKFSPLLKIKITAAHLD----HRIRESSRRD-REFVERICRQW 68
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ + ++ D + + +A +++ + L T A ++G
Sbjct: 69 NVPVETSEVDVPSLWKDSGKT--LEEIARELRYDFLRRT----------------AKKVG 110
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKY 178
T I + + D + + + G P + K+
Sbjct: 111 ATKIALAHHKNDL----------LETVVHRLIRGTGPLGLACISPKREEFIRPFLVFKRS 160
Query: 179 ETWKLAQDIGGQDLVN---LILEES 200
E + A++ G +V+ ++ +
Sbjct: 161 EIEEYAREKGVPYVVDETNYDVKYT 185
>gi|120613352|ref|YP_973030.1| tRNA-specific 2-thiouridylase MnmA [Acidovorax citrulli AAC00-1]
gi|166991120|sp|A1TWB8|MNMA_ACIAC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|120591816|gb|ABM35256.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidovorax citrulli AAC00-1]
Length = 378
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 11/35 (31%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + V +
Sbjct: 2 TASPKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGI 36
>gi|90412648|ref|ZP_01220650.1| NAD(+) synthetase [Photobacterium profundum 3TCK]
gi|90326456|gb|EAS42868.1| NAD(+) synthetase [Photobacterium profundum 3TCK]
Length = 278
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 9 PSALLL-FSGGQDSSTC--LSWALDRF---------DRVETLSFDYG-QRNKVELECRLC 55
+++L SGG DS+TC L+ + + YG Q ++ E + L
Sbjct: 37 CKSIVLGISGGVDSTTCGRLAQLAVNGLNDESNSSTYQFIAVRLPYGEQHDEHEAQMALS 96
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
K + KD + H L L D + + ++ N V R+ +
Sbjct: 97 FIKPSHSVSVNIKDGVDGIHASTLFALKDTGLTPKSDAKIDFVKGN------VKARSRM- 149
Query: 116 LVFAATLAYRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
A + I +V G V TD+S + PL
Sbjct: 150 --IA-----QYEIAGLVGGLVLGTDHSA--ENITGFYTKF--------GDGACDLAPLFG 192
Query: 175 LKKYETWKLAQDIGGQDLV 193
L K + +A +G D++
Sbjct: 193 LNKRQVRLIASKLGAPDVL 211
>gi|37526694|ref|NP_930038.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|81571961|sp|Q7MB22|MNMA_PHOLL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|36786126|emb|CAE15178.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 367
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|310831050|ref|YP_003969693.1| putative 3'-5' exonuclease/tRNA(Ile) lysidine synthetase [Cafeteria
roenbergensis virus BV-PW1]
gi|309386234|gb|ADO67094.1| putative 3'-5' exonuclease/tRNA(Ile) lysidine synthetase [Cafeteria
roenbergensis virus BV-PW1]
Length = 385
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQR 45
+ + ++ SGG DS L+ L+ +R+ T S +Y QR
Sbjct: 68 NTFNDQCTFIVSLSGGVDSMVLLALLLNIIPANRIITASINYNQR 112
>gi|296106371|ref|YP_003618071.1| cell cycle protein MesJ [Legionella pneumophila 2300/99 Alcoy]
gi|295648272|gb|ADG24119.1| cell cycle protein MesJ [Legionella pneumophila 2300/99 Alcoy]
Length = 433
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRNKVEL 50
+K+ ++ FSGG DS+ L +++ + ++G QR+ +L
Sbjct: 16 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRHCEQL 72
>gi|269926148|ref|YP_003322771.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Thermobaculum terrenum ATCC BAA-798]
gi|269789808|gb|ACZ41949.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Thermobaculum terrenum ATCC BAA-798]
Length = 355
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + D+ V +
Sbjct: 3 TVVVAMSGGVDSSVAAAMLRDQGYDVIGV 31
>gi|148360562|ref|YP_001251769.1| cell cycle protein MesJ [Legionella pneumophila str. Corby]
gi|148282335|gb|ABQ56423.1| cell cycle protein MesJ [Legionella pneumophila str. Corby]
Length = 431
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRNKVEL 50
+K+ ++ FSGG DS+ L +++ + ++G QR+ +L
Sbjct: 14 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRHCEQL 70
>gi|54296810|ref|YP_123179.1| hypothetical protein lpp0850 [Legionella pneumophila str. Paris]
gi|61216438|sp|Q5X6W4|TILS_LEGPA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|53750595|emb|CAH12000.1| hypothetical protein lpp0850 [Legionella pneumophila str. Paris]
Length = 431
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRNKVEL 50
+K+ ++ FSGG DS+ L +++ + ++G QR+ +L
Sbjct: 14 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRHCEQL 70
>gi|52841023|ref|YP_094822.1| cell cycle protein MesJ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|61216449|sp|Q5ZXE5|TILS_LEGPH RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|52628134|gb|AAU26875.1| cell cycle protein MesJ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 433
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRNKVEL 50
+K+ ++ FSGG DS+ L +++ + ++G QR+ +L
Sbjct: 16 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRHCEQL 72
>gi|323141806|ref|ZP_08076673.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Phascolarctobacterium sp. YIT 12067]
gi|322413729|gb|EFY04581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Phascolarctobacterium sp. YIT 12067]
Length = 357
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
AL+ SGG DSS L++ ++
Sbjct: 1 MNKKALIAMSGGVDSSVSALMMLEQDYECTGVT 33
>gi|205822022|sp|A8H5M1|MNMA_SHEPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 371
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHLGKKVIVGMSGGVDSSVSAYLLMKQGYQVEGL 40
>gi|134093604|ref|YP_001098679.1| tRNA-specific 2-thiouridylase MnmA [Herminiimonas arsenicoxydans]
gi|205816908|sp|A4G213|MNMA_HERAR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|133737507|emb|CAL60550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Herminiimonas arsenicoxydans]
Length = 372
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KKRVVIGMSGGVDSSVSAWLLKEQGYEVIGL 33
>gi|34498857|ref|NP_903072.1| tRNA-specific 2-thiouridylase MnmA [Chromobacterium violaceum ATCC
12472]
gi|81653627|sp|Q7MBE1|MNMA_CHRVO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|34104709|gb|AAQ61066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chromobacterium violaceum ATCC 12472]
Length = 384
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 69/221 (31%), Gaps = 26/221 (11%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ++ SGG DSS + V + Q + + + C K+
Sbjct: 26 PVTGKKRIVVGMSGGVDSSVTAWLLKQQGHEVIGVFM---QNWEDDNDDEYCSIKQDALD 82
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-IFLVFAATL 122
D +G D + + + + PN V N I
Sbjct: 83 AMSVADIVGID--MEIVNFAKEYKDRVFSYFLKEYSAGRTPNPDVLC-NAEIKFKAFLDY 139
Query: 123 AYRLGITNIVIGV----CETDYSGYPDCRHDTIRAIETA-----INLGMESHVTVHT--P 171
A LG I G E D + Y ++A++ ++ H P
Sbjct: 140 AMELGADCIATGHYARKLEQDGTHY------LMKAVDHTKDQSYFLYRLQQHQLAKAIFP 193
Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
L ++K E +LA++ G + C++G+R R
Sbjct: 194 LGDIRKTEVRRLAEEAGLPTAAKKD--STGICFIGERPFRE 232
>gi|326567613|gb|EGE17726.1| NAD+ synthetase [Moraxella catarrhalis 12P80B1]
Length = 529
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D DRV + Y ++ LE ++
Sbjct: 303 KGVIVGLSGGIDSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARL 356
>gi|326560148|gb|EGE10537.1| NAD+ synthetase [Moraxella catarrhalis 103P14B1]
Length = 517
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D DRV + Y ++ LE ++
Sbjct: 257 KGVIVGLSGGIDSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARL 310
>gi|301063984|ref|ZP_07204449.1| thiamine biosynthesis protein [delta proteobacterium NaphS2]
gi|300441895|gb|EFK06195.1| thiamine biosynthesis protein [delta proteobacterium NaphS2]
Length = 323
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ +FSGG DS + + V L F
Sbjct: 2 KAISVFSGGLDSMLAVELMRAQGIDVLALFF 32
>gi|149189023|ref|ZP_01867312.1| NAD synthetase [Vibrio shilonii AK1]
gi|148837209|gb|EDL54157.1| NAD synthetase [Vibrio shilonii AK1]
Length = 276
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 36/205 (17%)
Query: 2 NDIIKKAPSALLL-FSGGQDSSTCLSWAL-----------DRFDRVETLSFDYG-QRNKV 48
+ + + +++L SGG DS+TC A + + YG Q+++
Sbjct: 30 SKLQQSGCKSIVLGISGGVDSTTCGRLAQLAVNELNEESNSSDYQFIAVRLPYGEQKDED 89
Query: 49 ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
E + L + + K + H + S + + +++ FV
Sbjct: 90 EAQLALSFIEPTHSVSVNIKAGVDGLH----------AASHIALEGTGLLPEDSAKVDFV 139
Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
G N+ A +A + V TD+S +
Sbjct: 140 KG-NVK--ARARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACD 186
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + ++A +G + +
Sbjct: 187 LAPLFGLSKRQVREVADTLGAPEQL 211
>gi|117617562|ref|YP_855748.1| tRNA(Ile)-lysidine synthetase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117558969|gb|ABK35917.1| tRNA(Ile)-lysidine synthetase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 446
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 12 LLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYG 43
L+ FSGG DS+ L A ++ + L +G
Sbjct: 23 LVAFSGGLDSTVLLVLAAQFAREQGLVLRALHVHHG 58
>gi|262203058|ref|YP_003274266.1| sulfate adenylyltransferase small subunit [Gordonia bronchialis DSM
43247]
gi|262086405|gb|ACY22373.1| sulfate adenylyltransferase, small subunit [Gordonia bronchialis
DSM 43247]
Length = 316
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQR--NKVELECRLCVRKKIVE 62
++LFSGG+DS+ L AL F L D G +E ++ R +
Sbjct: 44 ERPVILFSGGKDSTVLLHVALKAFWPAPLPFALLHVDTGHNLPEVLEFRDQVVARHNLRL 103
Query: 63 LMPKWKDSLGE 73
+ K +D L +
Sbjct: 104 HVAKVEDYLAD 114
>gi|254168818|ref|ZP_04875659.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
gi|197622255|gb|EDY34829.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
Length = 308
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 25/141 (17%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFD-----RVETLSFDYGQRNKVELECRLCVRKKI 60
KK L+ SGG+DS L F + ++ D E RK
Sbjct: 45 KKGDKILIAVSGGKDSMLTLYQMHKIFGKWRDLELVAVTVD---------EGIGDFRKSC 95
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVF 118
++ + LG H + + +T + ++ P T+ V R +
Sbjct: 96 AKVANTYAKKLGIKH--EVITFKEYLG--ITTDDVARVDKELKPCTYCGV-FRRKVL--- 147
Query: 119 AATLAYRLGITNIVIGVCETD 139
+ +G +++G+ D
Sbjct: 148 -NMYSKEIGANYLILGLNLDD 167
>gi|167623646|ref|YP_001673940.1| tRNA-specific 2-thiouridylase MnmA [Shewanella halifaxensis
HAW-EB4]
gi|189040508|sp|B0TQ02|MNMA_SHEHH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|167353668|gb|ABZ76281.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella halifaxensis HAW-EB4]
Length = 371
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPTHLGKKVIVGMSGGVDSSVSAYLLMKQGYQVEGL 40
>gi|152968782|ref|YP_001333891.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150953631|gb|ABR75661.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 437
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 24/65 (36%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ FSGG DS+ L + ++ L+ + ++ +W+ L
Sbjct: 20 LVAFSGGLDSTVLLHQLVQLREQDPALTLRAVHVHHGLSAHADQWVAHCRQVCQQWQVPL 79
Query: 72 GEDHI 76
H+
Sbjct: 80 VVHHV 84
>gi|70606252|ref|YP_255122.1| GMP synthase [Sulfolobus acidocaldarius DSM 639]
gi|68566900|gb|AAY79829.1| GMP synthase [Sulfolobus acidocaldarius DSM 639]
Length = 373
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 32/190 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ SGG DS+T + D+V + D G + E+E + K ++ L
Sbjct: 23 KAIAAVSGGVDSTTAATLTYKLMGDKVIPIIIDTGFLREGEVEKVKNMVKNVLPLQVVDA 82
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L + S + R IF + L +
Sbjct: 83 KE---------KFLRALEGLSDAEEKRKT------------FR-KIFYDILSELVRKYNA 120
Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAI-ETAINLGMES----HVTVHTPLMWLKKYETWKL 183
++ G D+ I+ + LG+++ V PL L K E KL
Sbjct: 121 KYLIQGTIAADWVE----TQGGIKTQHNVLVQLGIDTEREWGFKVVEPLADLYKNEVRKL 176
Query: 184 AQDIGGQDLV 193
+ +G +
Sbjct: 177 GEYLGLPKEI 186
>gi|319936954|ref|ZP_08011364.1| hypothetical protein HMPREF9488_02198 [Coprobacillus sp. 29_1]
gi|319807890|gb|EFW04469.1| hypothetical protein HMPREF9488_02198 [Coprobacillus sp. 29_1]
Length = 411
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 1 MND-IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV----ELECRLC 55
MN+ ++ K ++ SGG DS L + + +Y R+ EL C C
Sbjct: 1 MNEKLLNKTSYYVIGVSGGCDSMYLLDTLRKKGYHLLVAHVNYNYRHDSYIDYELVCDYC 60
Query: 56 VRKKIVELMPKWKDS 70
+ ++ ++
Sbjct: 61 ATHGLPFYYKQFHEA 75
>gi|291446385|ref|ZP_06585775.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 15998]
gi|291349332|gb|EFE76236.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 15998]
Length = 411
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 17/95 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRF-DRVETLSFD--------YGQRNKVELECRLCVRKKIVE 62
+ LFSGG DSS L V +S D Y Q+ EL + + + E
Sbjct: 31 VTLFSGGLDSSYLLLRLRRMGMREVHAVSVDIGEDESSSYKQQVAEELGATIHILDRREE 90
Query: 63 LMPKW--------KDSLGEDHILPLAILGDISHSS 89
++ LG + I+HS+
Sbjct: 91 FAERYVAPAIAAQAVYLGIHPVSSTLSRPLIAHSA 125
>gi|257454669|ref|ZP_05619925.1| argininosuccinate synthase [Enhydrobacter aerosaccus SK60]
gi|257447979|gb|EEV22966.1| argininosuccinate synthase [Enhydrobacter aerosaccus SK60]
Length = 454
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ + + + KK +
Sbjct: 29 FSGGLDTSAALLWMKQKGALPYAYTANLGQ---PDEDDYNAIPKKADQYGAVKA------ 79
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ + + + + A + +P
Sbjct: 80 RLIDCRLQLALEGIAAIQCGAFHVSTGGMP 109
>gi|224826536|ref|ZP_03699637.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lutiella nitroferrum 2002]
gi|224601137|gb|EEG07319.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lutiella nitroferrum 2002]
Length = 358
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ ++ SGG DSS + V + Q + + + C K+
Sbjct: 1 MTGKKRIVVGMSGGVDSSVTAWLLKQQGHEVIGVFM---QNWEDDNDDEYCSIKQDALDA 57
Query: 65 PKWKDSLGED 74
D +G D
Sbjct: 58 MSVADIVGID 67
>gi|212702277|ref|ZP_03310405.1| hypothetical protein DESPIG_00288 [Desulfovibrio piger ATCC
29098]
gi|212674270|gb|EEB34753.1| hypothetical protein DESPIG_00288 [Desulfovibrio piger ATCC
29098]
Length = 402
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
+ K +L +SGG D+S L W ++ + V T++ D GQ
Sbjct: 1 MNKDIKKVVLAYSGGLDTSVILKWLIETYKCEVITVTADLGQ 42
>gi|254428409|ref|ZP_05042116.1| tRNA methyl transferase [Alcanivorax sp. DG881]
gi|196194578|gb|EDX89537.1| tRNA methyl transferase [Alcanivorax sp. DG881]
Length = 361
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 1 MNDIIKK-APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
M + + A+ L SGG DS + ++ VE ++F
Sbjct: 1 MTEASQPIKRRAIALVSGGLDSMLAVKVMQEQGIEVEGVNF 41
>gi|119383251|ref|YP_914307.1| argininosuccinate synthase [Paracoccus denitrificans PD1222]
gi|171704464|sp|A1AZB7|ASSY_PARDP RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|119373018|gb|ABL68611.1| argininosuccinate synthase [Paracoccus denitrificans PD1222]
Length = 408
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ AP ++L +SGG D+S L W + V T + D GQ ++E ++ E
Sbjct: 1 MSDAPKKVVLAYSGGLDTSIILKWLQTEYGCEVITFTADLGQGEELE------PARQKAE 54
Query: 63 LMPKWKDSLGEDHILPL 79
L+ +++ HI+ +
Sbjct: 55 LLGIKPENI---HIVDV 68
>gi|313903525|ref|ZP_07836915.1| GMP synthase (glutamine-hydrolyzing) [Thermaerobacter subterraneus
DSM 13965]
gi|313466078|gb|EFR61602.1| GMP synthase (glutamine-hydrolyzing) [Thermaerobacter subterraneus
DSM 13965]
Length = 524
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 70/192 (36%), Gaps = 31/192 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
AL SGG DS+ R+ + D G +R VE + +
Sbjct: 228 RALCALSGGVDSTVAAVLVHRAIGPRLACVFVDTG-----------LLRAGEVEEVQESL 276
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
LG + L + D ++L + + + TF+ R +F A LA LG
Sbjct: 277 VGLGIE--LRVVDARDRFLAALDGIADPEAKRKAVGETFI--R--VFEEEARQLAEELGP 330
Query: 128 ITNIVIGVCETDYSGYPD------CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
I +V G + YPD TI++ L + + PL +L K E
Sbjct: 331 IPFLVQG------TTYPDVIESGGGAAATIKSHHNVGGLPPDLAFRLVEPLRYLFKDEVR 384
Query: 182 KLAQDIGGQDLV 193
++ + +G + V
Sbjct: 385 EVGRRLGLPEAV 396
>gi|312136397|ref|YP_004003734.1| queuosine synthesis [Methanothermus fervidus DSM 2088]
gi|311224116|gb|ADP76972.1| Queuosine synthesis [Methanothermus fervidus DSM 2088]
Length = 194
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMP 65
A +LFSGG+DSS + VE ++ ++G + E L K+++L
Sbjct: 2 KACVLFSGGKDSSLMATILDRLGMDVELVTVNFGIYDSWKAAAESAKALDFEHKVLKLNK 61
Query: 66 KWKDSLGEDHILP 78
K E +
Sbjct: 62 KIIIKAVEKILED 74
>gi|269114904|ref|YP_003302667.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma hominis]
gi|268322529|emb|CAX37264.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma hominis ATCC 23114]
Length = 370
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+L SGG DSS C + V L
Sbjct: 1 MKKRVVLGMSGGVDSSVCGYLLQKQGYDVVGL 32
>gi|240278736|gb|EER42242.1| argininosuccinate synthetase [Ajellomyces capsulatus H143]
Length = 412
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ L +SGG D+S L+W +++ V D GQ + + I L
Sbjct: 1 MPAKQKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58
Query: 65 PKWKD 69
D
Sbjct: 59 LVVAD 63
>gi|257790812|ref|YP_003181418.1| ExsB family protein [Eggerthella lenta DSM 2243]
gi|257474709|gb|ACV55029.1| ExsB family protein [Eggerthella lenta DSM 2243]
Length = 210
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 38/184 (20%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ P + FSGG DSS L+ AL V YG R + + +++ +
Sbjct: 21 RTPRLAVAFSGGCDSSFLLAAALRAGCDVRA----YGVRTAFQPAFEIEDAQRLAAELGA 76
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + + G+I + + K TF IF A +A
Sbjct: 77 DFELVDA----DVLAQGEICANGPDRCYRCK--------TF------IFSTILARMAED- 117
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKLA 184
G + G TD P R + LG V +PL + K + +
Sbjct: 118 GFEVLADGTNVTDD---PANRPGF----QALAELG------VVSPLRRAGMTKDDVRAAS 164
Query: 185 QDIG 188
+++G
Sbjct: 165 RELG 168
>gi|323340536|ref|ZP_08080791.1| argininosuccinate synthase [Lactobacillus ruminis ATCC 25644]
gi|323092080|gb|EFZ34697.1| argininosuccinate synthase [Lactobacillus ruminis ATCC 25644]
Length = 402
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ + +L +SGG D+S ++W ++ V D G+ +E + + VE
Sbjct: 1 MVMEKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVGEGKDLEEVKQKGLAVGAVE 59
>gi|227509407|ref|ZP_03939456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227191119|gb|EEI71186.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 374
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS + V +
Sbjct: 1 MQD--NSQTRVVVGMSGGVDSSVVAYLLKQQGYDVIGV 36
>gi|153950153|ref|YP_001400589.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pseudotuberculosis
IP 31758]
gi|205828987|sp|A7FH61|MNMA_YERP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|152961648|gb|ABS49109.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pseudotuberculosis IP 31758]
Length = 371
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|94500816|ref|ZP_01307345.1| argininosuccinate synthase [Oceanobacter sp. RED65]
gi|94427138|gb|EAT12119.1| argininosuccinate synthase [Oceanobacter sp. RED65]
Length = 405
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S W + + + T + D GQ ++E + I E+
Sbjct: 1 MSDINKIVLAYSGGLDTSVIAKWLQEEYNAEIVTFTADLGQGEELEPARKKAEAMGIKEI 60
Query: 64 M-PKWKDSLGEDHILPLAILGDI 85
++ D + P+ I
Sbjct: 61 FIDDLREEFARDFVFPMFRANAI 83
>gi|83648563|ref|YP_436998.1| NAD synthase [Hahella chejuensis KCTC 2396]
gi|83636606|gb|ABC32573.1| NAD synthase [Hahella chejuensis KCTC 2396]
Length = 546
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDRF--DRVETLS--FDYGQRNKVELECRLCVRK 58
+ K ++++ SGG DS+ L+ A+D DRV + F Y + +E
Sbjct: 282 VNKNRFKSVVIGLSGGIDSAVTLAVAVDAIGADRVRAVMMPFRYTSQMSLEDAEAEAKAL 341
Query: 59 KI 60
+
Sbjct: 342 GV 343
>gi|22125693|ref|NP_669116.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis KIM 10]
gi|45441579|ref|NP_993118.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis biovar
Microtus str. 91001]
gi|51596752|ref|YP_070943.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pseudotuberculosis
IP 32953]
gi|108807881|ref|YP_651797.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis Antiqua]
gi|108812155|ref|YP_647922.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis Nepal516]
gi|145599092|ref|YP_001163168.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis Pestoides F]
gi|149366398|ref|ZP_01888432.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis CA88-4125]
gi|162421419|ref|YP_001607233.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis Angola]
gi|165925423|ref|ZP_02221255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165938528|ref|ZP_02227085.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. IP275]
gi|166008070|ref|ZP_02228968.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166211105|ref|ZP_02237140.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Antiqua str. B42003004]
gi|167401703|ref|ZP_02307194.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421866|ref|ZP_02313619.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167426312|ref|ZP_02318065.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167470788|ref|ZP_02335492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis FV-1]
gi|170023961|ref|YP_001720466.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pseudotuberculosis
YPIII]
gi|186895819|ref|YP_001872931.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pseudotuberculosis
PB1/+]
gi|218928774|ref|YP_002346649.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis CO92]
gi|229841625|ref|ZP_04461783.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229843742|ref|ZP_04463885.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. India 195]
gi|229894486|ref|ZP_04509668.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Pestoides A]
gi|229902476|ref|ZP_04517595.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Nepal516]
gi|270490345|ref|ZP_06207419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis KIM D27]
gi|294504164|ref|YP_003568226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Z176003]
gi|24638321|sp|Q8ZFQ5|MNMA_YERPE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|73920130|sp|Q669Q4|MNMA_YERPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|122980130|sp|Q1CI58|MNMA_YERPN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|123245748|sp|Q1C6S0|MNMA_YERPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205828988|sp|B2K711|MNMA_YERPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205828989|sp|A9R0L5|MNMA_YERPG RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205828990|sp|A4TLN3|MNMA_YERPP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205828991|sp|B1JI67|MNMA_YERPY RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|21958608|gb|AAM85367.1|AE013782_8 hypothetical protein y1799 [Yersinia pestis KIM 10]
gi|45436440|gb|AAS61995.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Microtus str. 91001]
gi|51590034|emb|CAH21668.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pseudotuberculosis IP 32953]
gi|108775803|gb|ABG18322.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Nepal516]
gi|108779794|gb|ABG13852.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Antiqua]
gi|115347385|emb|CAL20283.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis CO92]
gi|145210788|gb|ABP40195.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Pestoides F]
gi|149290772|gb|EDM40847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis CA88-4125]
gi|162354234|gb|ABX88182.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Angola]
gi|165913643|gb|EDR32263.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. IP275]
gi|165922532|gb|EDR39683.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165992452|gb|EDR44753.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166208285|gb|EDR52765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Antiqua str. B42003004]
gi|166960351|gb|EDR56372.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167048808|gb|EDR60216.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054667|gb|EDR64471.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169750495|gb|ACA68013.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pseudotuberculosis YPIII]
gi|186698845|gb|ACC89474.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pseudotuberculosis PB1/+]
gi|229680522|gb|EEO76619.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Nepal516]
gi|229689350|gb|EEO81413.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. India 195]
gi|229694088|gb|EEO84136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229703505|gb|EEO90522.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Pestoides A]
gi|262362281|gb|ACY59002.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis D106004]
gi|262366214|gb|ACY62771.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis D182038]
gi|270338849|gb|EFA49626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis KIM D27]
gi|294354623|gb|ADE64964.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia pestis Z176003]
gi|320014781|gb|ADV98352.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 371
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|301065024|ref|ZP_07205369.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[delta proteobacterium NaphS2]
gi|300440873|gb|EFK05293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[delta proteobacterium NaphS2]
Length = 363
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L+ SGG DSS ++ RV L F
Sbjct: 15 KILVALSGGVDSSMAAAFLKGAGHRVHGLHF 45
>gi|271962728|ref|YP_003336924.1| GMP synthase C terminal domain-containing protein
[Streptosporangium roseum DSM 43021]
gi|270505903|gb|ACZ84181.1| GMP synthase C terminal domain protein [Streptosporangium roseum
DSM 43021]
Length = 523
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG--QRNKVELECRLCVR 57
A+ SGG DS+ + DR+ + D+G ++ + E R V
Sbjct: 225 RAICALSGGVDSAVAAAMVQRAIGDRLTCVFVDHGLLRKGEAEQVERDFVA 275
>gi|227512195|ref|ZP_03942244.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus buchneri ATCC 11577]
gi|227084589|gb|EEI19901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus buchneri ATCC 11577]
Length = 374
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS + V +
Sbjct: 1 MQD--NSQTRVVVGMSGGVDSSVVAYLLKQQGYDVIGV 36
>gi|254516593|ref|ZP_05128652.1| argininosuccinate synthase [gamma proteobacterium NOR5-3]
gi|219675016|gb|EED31383.1| argininosuccinate synthase [gamma proteobacterium NOR5-3]
Length = 406
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W D + V T + D GQ +VE + E+
Sbjct: 1 MADVKKVVLAYSGGLDTSVIVRWLQDNYACEVVTFTADIGQGEEVEPARAKAKALGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|83309218|ref|YP_419482.1| asparagine synthase [Magnetospirillum magneticum AMB-1]
gi|82944059|dbj|BAE48923.1| Asparagine synthase [Magnetospirillum magneticum AMB-1]
Length = 639
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 24/133 (18%)
Query: 15 FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS +A R + + + + E V + + +
Sbjct: 263 LSGGLDSSAVAYYAARRHGQAISSFGLAFEETTHDESNDARTVARHL---------GIEH 313
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV-FAATLAYRLGITNIV 132
++ L +T+ + D +T VP ++ L FA R +T ++
Sbjct: 314 KELMFSPALVREGLRRVTETMDEPFGD----STVVP---LLMLSRFA-----REHVTVVL 361
Query: 133 IGVCETD-YSGYP 144
G + +GYP
Sbjct: 362 TGWGGDEVLAGYP 374
>gi|304315387|ref|YP_003850534.1| argininosuccinate synthase [Methanothermobacter marburgensis str.
Marburg]
gi|302588846|gb|ADL59221.1| argininosuccinate synthase [Methanothermobacter marburgensis str.
Marburg]
Length = 394
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 53/187 (28%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L FSGG D+S C+ +++ V T D GQ + E+E V +++
Sbjct: 2 DKVVLAFSGGLDTSVCIKLLEEKYGMEVITACVDVGQ-PREEVERPARVAEELGNY---- 56
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT------ 121
+ H + + + + + + P L A
Sbjct: 57 -----KHHTVDARE--EFAENYIFPAIKANAVYEGYP-----------LSTALARPLIAE 98
Query: 122 ----LAYRLGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPLM 173
+A G + I G C E I + + V P+
Sbjct: 99 KIVEVAESEGASAIAHG-----------CTGKGNDQF--RFEAVIRSRTD--LEVIAPIR 143
Query: 174 WLKKYET 180
L T
Sbjct: 144 DLNLTRT 150
>gi|299470329|emb|CBN78379.1| argininosuccinate synthetase [Ectocarpus siliculosus]
Length = 432
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L +SGG D+S L W + V + GQ + E + + K +
Sbjct: 16 EKVVLAYSGGLDTSVILKWLSGQGFEVICYCANVGQ--QGEDYDAITKKAKDCGASKVYI 73
Query: 69 DSLGEDHILP 78
+ L E+ +
Sbjct: 74 EDLCEEFVTD 83
>gi|297616333|ref|YP_003701492.1| tRNA(Ile)-lysidine synthetase [Syntrophothermus lipocalidus DSM
12680]
gi|297144170|gb|ADI00927.1| tRNA(Ile)-lysidine synthetase [Syntrophothermus lipocalidus DSM
12680]
Length = 463
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 41/142 (28%), Gaps = 27/142 (19%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
+++I ++ SGG DS L + + ++G R + E E
Sbjct: 18 HNLISPGELVVVGVSGGPDSVALLHLLHLLGKEEGFSIHAAHLNHGLRPEAEEEE----- 72
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ + SLG + A + + + +++ R F+
Sbjct: 73 ----VFVRELAKSLGLGCTVDRAKVRE---EARAGRRSVEEAGRQ-------ARYAFFIR 118
Query: 118 FAATLAYRLGITNIVIGVCETD 139
A L + D
Sbjct: 119 V----AEELKADKVATAHHMGD 136
>gi|257792909|gb|ACV67286.1| WbpS [Escherichia coli]
Length = 614
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 17/46 (36%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+T ++ V T S + E + K I
Sbjct: 269 LSGGIDSTTIVAMLKKSGRDVSTFSIGMPNKQFDESHHAEQIAKYI 314
>gi|282890136|ref|ZP_06298667.1| hypothetical protein pah_c013o042 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|281499987|gb|EFB42275.1| hypothetical protein pah_c013o042 [Parachlamydia acanthamoebae
str. Hall's coccus]
Length = 375
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS ++ V +
Sbjct: 1 MSSQKTVVVGMSGGVDSSVSALLLKEQGYNVIGM 34
>gi|239942912|ref|ZP_04694849.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 15998]
gi|239989372|ref|ZP_04710036.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 11379]
Length = 402
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 17/95 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRF-DRVETLSFD--------YGQRNKVELECRLCVRKKIVE 62
+ LFSGG DSS L V +S D Y Q+ EL + + + E
Sbjct: 22 VTLFSGGLDSSYLLLRLRRMGMREVHAVSVDIGEDESSSYKQQVAEELGATIHILDRREE 81
Query: 63 LMPKW--------KDSLGEDHILPLAILGDISHSS 89
++ LG + I+HS+
Sbjct: 82 FAERYVAPAIAAQAVYLGIHPVSSTLSRPLIAHSA 116
>gi|238758422|ref|ZP_04619599.1| tRNA-specific 2-thiouridylase mnmA [Yersinia aldovae ATCC 35236]
gi|238703326|gb|EEP95866.1| tRNA-specific 2-thiouridylase mnmA [Yersinia aldovae ATCC 35236]
Length = 373
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|269120194|ref|YP_003308371.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Sebaldella termitidis ATCC 33386]
gi|268614072|gb|ACZ08440.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Sebaldella termitidis ATCC 33386]
Length = 359
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+L SGG DSS ++ V +
Sbjct: 1 MKKRVVLGMSGGVDSSVAAILLKEQGYEVIGV 32
>gi|209528161|ref|ZP_03276633.1| Argininosuccinate synthase [Arthrospira maxima CS-328]
gi|209491394|gb|EDZ91777.1| Argininosuccinate synthase [Arthrospira maxima CS-328]
Length = 400
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQ 44
+ +A A+L +SGG D+S C+ + + F V T++ D GQ
Sbjct: 1 MGRAEKAVLAYSGGVDTSVCIPYLKNEFGVAEVITVAVDLGQ 42
>gi|116252733|ref|YP_768571.1| argininosuccinate synthase [Rhizobium leguminosarum bv. viciae
3841]
gi|119361253|sp|Q1MEZ8|ASSY1_RHIL3 RecName: Full=Argininosuccinate synthase 1; AltName:
Full=Citrulline--aspartate ligase 1
gi|115257381|emb|CAK08476.1| putative argininosuccinate synthase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 403
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 16/133 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S L W + + V T + D GQ ++E + ++
Sbjct: 1 MTKIEKIVLSYSGGLDTSIILKWLQETYGCEVVTFTADLGQGEELEPARAKAEMSGVKDI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ D + P+ + ++ + +
Sbjct: 61 RIVDLREEFVSDFVFPMLRANALYEGQYLLGSSIARP--------------LIAKHLVGI 106
Query: 123 AYRLGITNIVIGV 135
A +G + G
Sbjct: 107 AREVGADAVAHGA 119
>gi|126178393|ref|YP_001046358.1| hypothetical protein Memar_0443 [Methanoculleus marisnigri JR1]
gi|125861187|gb|ABN56376.1| hypothetical protein Memar_0443 [Methanoculleus marisnigri JR1]
Length = 80
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELEC 52
+ LLL+SGG S+ CL L V L D GQ K ELE
Sbjct: 32 MSTRCLLLYSGGIASTACLHHLLSAGFAVTPLYVDPGQSELKNELER 78
>gi|91975193|ref|YP_567852.1| argininosuccinate synthase [Rhodopseudomonas palustris BisB5]
gi|123735756|sp|Q13D88|ASSY_RHOPS RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|91681649|gb|ABE37951.1| argininosuccinate synthase [Rhodopseudomonas palustris BisB5]
Length = 445
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 1 MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
M I+K K + + FSGG D+S L W + RV + + GQ
Sbjct: 1 MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQ 47
>gi|318606118|emb|CBY27616.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia enterocolitica subsp. palearctica Y11]
Length = 373
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|284991820|ref|YP_003410374.1| NAD+ synthetase [Geodermatophilus obscurus DSM 43160]
gi|284065065|gb|ADB76003.1| NAD+ synthetase [Geodermatophilus obscurus DSM 43160]
Length = 611
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
PS +L SGG DS+ C + A+D DRV + L R + +
Sbjct: 342 PSVVLGLSGGIDSAVCAALAVDALGADRVYGVG----------LPSRYSSEHSLADAEDL 391
Query: 67 WKDSLGEDHILPLAILGDISHSS 89
+ + ++P+A + D HSS
Sbjct: 392 ARRTGLHYSVVPIAPMVDAYHSS 414
>gi|227524073|ref|ZP_03954122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus hilgardii ATCC 8290]
gi|227088812|gb|EEI24124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus hilgardii ATCC 8290]
Length = 374
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS + V +
Sbjct: 1 MQD--NSQTRVVVGMSGGVDSSVVAYLLKQQGYDVIGV 36
>gi|238791830|ref|ZP_04635467.1| tRNA-specific 2-thiouridylase mnmA [Yersinia intermedia ATCC
29909]
gi|238728934|gb|EEQ20451.1| tRNA-specific 2-thiouridylase mnmA [Yersinia intermedia ATCC
29909]
Length = 373
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|311029205|ref|ZP_07707295.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
[Bacillus sp. m3-13]
Length = 368
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+KK P ++ SGG DSS ++ V +
Sbjct: 1 MKKRPEDTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 37
>gi|270284207|ref|ZP_05965742.2| argininosuccinate synthase [Bifidobacterium gallicum DSM 20093]
gi|270277327|gb|EFA23181.1| argininosuccinate synthase [Bifidobacterium gallicum DSM 20093]
Length = 427
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
M+D + +L +SGG D+S + + DR V +S D GQ
Sbjct: 12 MSDTAQDKNRIVLAYSGGLDTSVAIPYLKDRTGKDVVAVSLDVGQ 56
>gi|225560336|gb|EEH08618.1| argininosuccinate synthetase [Ajellomyces capsulatus G186AR]
Length = 416
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ L +SGG D+S L+W +++ V D GQ + + I L
Sbjct: 1 MPAKQKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58
Query: 65 PKWKD 69
D
Sbjct: 59 LVVAD 63
>gi|134046543|ref|YP_001098028.1| hypothetical protein MmarC5_1517 [Methanococcus maripaludis C5]
gi|132664168|gb|ABO35814.1| conserved hypothetical protein [Methanococcus maripaludis C5]
Length = 195
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A +LFSGG+DSS + ++ ++ ++G
Sbjct: 2 KAHVLFSGGKDSSLSAIILHNLGYEIQLVTVNFG 35
>gi|157962359|ref|YP_001502393.1| tRNA-specific 2-thiouridylase MnmA [Shewanella pealeana ATCC
700345]
gi|157847359|gb|ABV87858.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella pealeana ATCC 700345]
Length = 398
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 32 EPTHLGKKVIVGMSGGVDSSVSAYLLMKQGYQVEGL 67
>gi|330834163|ref|YP_004408891.1| argininosuccinate synthase [Metallosphaera cuprina Ar-4]
gi|329566302|gb|AEB94407.1| argininosuccinate synthase [Metallosphaera cuprina Ar-4]
Length = 393
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRN---KVELEC--RLCVRKKI 60
+L +SGG D++ + W + + V ++S D GQ K+E V+ +
Sbjct: 1 MKMKIVLAYSGGLDTTVAIRWLKETYNAEVVSVSVDVGQLEDFKKIEERAYLAGSVKHYL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
++ ++ + ++ + ++ + + +
Sbjct: 61 IDAKNEFAERFAITDVIMNGLYEEVYPLATALARPLIAE 99
>gi|331701087|ref|YP_004398046.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus buchneri NRRL
B-30929]
gi|329128430|gb|AEB72983.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus buchneri NRRL
B-30929]
Length = 374
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS + V +
Sbjct: 1 MQD--NSQTRVVVGMSGGVDSSVVAYLLKQQGYDVIGV 36
>gi|332162070|ref|YP_004298647.1| tRNA-specific 2-thiouridylase MnmA [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|325666300|gb|ADZ42944.1| tRNA-specific 2-thiouridylase MnmA [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330860067|emb|CBX70393.1| tRNA-specific 2-thiouridylase mnmA [Yersinia enterocolitica
W22703]
Length = 373
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|295675544|ref|YP_003604068.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. CCGE1002]
gi|295435387|gb|ADG14557.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. CCGE1002]
Length = 420
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRKVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|58038730|ref|YP_190694.1| argininosuccinate synthase [Gluconobacter oxydans 621H]
gi|81672747|sp|Q5FUA8|ASSY_GLUOX RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|58001144|gb|AAW60038.1| Argininosuccinate synthase [Gluconobacter oxydans 621H]
Length = 410
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 22/132 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
+L +SGG D+S L W + V T + D GQ ++E + + E+
Sbjct: 8 KKVVLAYSGGLDTSVILRWLQKTYNCEVVTFTADLGQGEELEPARKKAEMFGVKEIFVED 67
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---ATLA 123
+++ +D + P+ + ++ + A +A
Sbjct: 68 LRETFVKDFVFPMFRANTLYEGQYLLGTSIARP-----------------LIAQRQIEIA 110
Query: 124 YRLGITNIVIGV 135
+G + G
Sbjct: 111 EAVGADAVAHGA 122
>gi|9971575|dbj|BAB12569.1| asparagine synthase homolog [Streptomyces aureofaciens]
Length = 609
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMPKWKDSLG 72
L SGG DSS + A V + S D+ R + VR++ + + +G
Sbjct: 261 LLSGGLDSSAVTALAARSGP-VRSFSVDF--RGAADAFASDAVRREADAPYVRELAGHVG 317
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
DH+ L +S ++ V ++ +LP +
Sbjct: 318 ADHLEVLLDSPGLSDPAVRSAV---LRATDLPPAYW 350
>gi|88810769|ref|ZP_01126026.1| putative LPS biosynthesis protein WbpG [Nitrococcus mobilis Nb-231]
gi|88792399|gb|EAR23509.1| putative LPS biosynthesis protein WbpG [Nitrococcus mobilis Nb-231]
Length = 360
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 18/139 (12%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+K ++ SGG DS+ R + FD G ++ + ++ +
Sbjct: 53 RKPYDCVIGVSGGVDSTYVAYLTKQLGLRPLAVHFDNGWDSEFAVANIEKTLDRLSIDLY 112
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ E L L+ L + T + + + + AA
Sbjct: 113 TYVVDWEEFKDLQLSFLK-----ASTPDGEVPTDHAIV---------ALLYRMAAKY--- 155
Query: 126 LGITNIVIGVCETDYSGYP 144
G+ +I++G + P
Sbjct: 156 -GVKHILLGTNVASEAIMP 173
>gi|294636777|ref|ZP_06715115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Edwardsiella tarda ATCC 23685]
gi|291089992|gb|EFE22553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Edwardsiella tarda ATCC 23685]
Length = 376
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 10 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 45
>gi|289450037|ref|YP_003475194.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289184584|gb|ADC91009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 380
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELMPKWK 68
L+ SGG DSS +D V + Q + E C R C VE +
Sbjct: 5 KVLVAMSGGVDSSVAAKLLVDHGYDVTGATMQIWQNEREENHCDRGCCSLSAVEDARRVA 64
Query: 69 DSLGEDH 75
+G +
Sbjct: 65 AKIGIPY 71
>gi|123442025|ref|YP_001006008.1| tRNA-specific 2-thiouridylase MnmA [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|205828986|sp|A1JLK6|MNMA_YERE8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|122088986|emb|CAL11797.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Yersinia enterocolitica subsp. enterocolitica 8081]
Length = 373
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|127512489|ref|YP_001093686.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella loihica PV-4]
gi|166235081|sp|A3QD79|MNMA_SHELP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|126637784|gb|ABO23427.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shewanella loihica PV-4]
Length = 371
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + + +VE L
Sbjct: 5 EPNPNGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 40
>gi|238796003|ref|ZP_04639515.1| tRNA-specific 2-thiouridylase mnmA [Yersinia mollaretii ATCC
43969]
gi|238720208|gb|EEQ12012.1| tRNA-specific 2-thiouridylase mnmA [Yersinia mollaretii ATCC
43969]
Length = 373
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|319938290|ref|ZP_08012687.1| hypothetical protein HMPREF9488_03523 [Coprobacillus sp. 29_1]
gi|319806583|gb|EFW03241.1| hypothetical protein HMPREF9488_03523 [Coprobacillus sp. 29_1]
Length = 279
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
ALL+ SGG DS L R +E + Y R V +V+++ +
Sbjct: 178 KALLMLSGGIDSPVAGYLTLKRGVDIECIH--YASPPYTSDLAREKVL-DLVDVLRHYTH 234
Query: 70 SLGEDHILPLAIL 82
HI+P L
Sbjct: 235 GKITVHIVPFTEL 247
>gi|302390349|ref|YP_003826170.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
gi|302200977|gb|ADL08547.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
Length = 316
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 28/80 (35%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ L++ SGG+DS L V + + G + E + R
Sbjct: 42 KMFGPKDRVLVVVSGGKDSMALWHILLKEGYDVTAMYINLGIGDYSERSQEVVERFSEEH 101
Query: 63 LMPKWKDSLGEDHILPLAIL 82
P ++ +++ L + L
Sbjct: 102 EAPLIVKNIEKEYGLNIPWL 121
>gi|294496034|ref|YP_003542527.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
gi|292667033|gb|ADE36882.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
Length = 305
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 31/150 (20%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWA-----LDRFDRVETLSFDYGQRNKVELECRLCV 56
N I K + SGG+DS L R + ++ D E
Sbjct: 46 NYNIGKNEKIAVALSGGKDSCVALYILNKIFGKRRDLELVAITVD---------EGISVY 96
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGR 111
R++ +E K +G H++ + + S ++ L + V R
Sbjct: 97 RERSIEYARKLTSDIGVKHLI-HSFADEYDTSLDELAAKERVHGACSYCGVLRKSLV-NR 154
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYS 141
+A +G +V G D +
Sbjct: 155 ----------IALDIGAKRLVTGHNLDDEA 174
>gi|117617943|ref|YP_855954.1| tRNA-specific 2-thiouridylase MnmA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166234841|sp|A0KI53|MNMA_AERHH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|117559350|gb|ABK36298.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 368
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 48/154 (31%), Gaps = 40/154 (25%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELMPKWK 68
++ SGG DSS + +VE L +N E + C + +
Sbjct: 8 KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDTDEYCSAAQDLADAKAVC 63
Query: 69 DSLG----------------EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
D LG +H L G + + N +K +
Sbjct: 64 DKLGMKLHTINFAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKA------------ 111
Query: 113 IIFLVFAATLAYRLGITNIVIG--VCETDYSGYP 144
FL FA A LG T I G V D +G P
Sbjct: 112 --FLEFA---AEELGATYIATGHYVRRDDSTGRP 140
>gi|73855169|gb|AAZ87876.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 383
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|24051447|gb|AAN42769.1| orf, conserved hypothetical protein [Shigella flexneri 2a str.
301]
gi|30040928|gb|AAP16658.1| hypothetical protein S1235 [Shigella flexneri 2a str. 2457T]
gi|281600566|gb|ADA73550.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Shigella flexneri 2002017]
Length = 383
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|229493125|ref|ZP_04386917.1| sulfate adenylyltransferase subunit 2 [Rhodococcus erythropolis
SK121]
gi|229319856|gb|EEN85685.1| sulfate adenylyltransferase subunit 2 [Rhodococcus erythropolis
SK121]
Length = 317
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCVRKKIVELM 64
++LFSGG+DS+ L A+ F L D G + L+ R V + +
Sbjct: 45 ERPVILFSGGKDSTVLLHLAIKAFWPAPLPFTLLHVDTGHNLQEVLDFRDHV---VAKYN 101
Query: 65 PKWKDSLGEDHILP 78
+ + E++I
Sbjct: 102 LRLHVASVEEYIAD 115
>gi|226307235|ref|YP_002767195.1| sulfate adenylyltransferase subunit 2 [Rhodococcus erythropolis
PR4]
gi|226186352|dbj|BAH34456.1| sulfate adenylyltransferase subunit 2 [Rhodococcus erythropolis
PR4]
Length = 311
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCVRKKIVELM 64
++LFSGG+DS+ L A+ F L D G + L+ R V + +
Sbjct: 39 ERPVILFSGGKDSTVLLHLAIKAFWPAPLPFTLLHVDTGHNLQEVLDFRDHV---VAKYN 95
Query: 65 PKWKDSLGEDHILP 78
+ + E++I
Sbjct: 96 LRLHVASVEEYIAD 109
>gi|169628750|ref|YP_001702399.1| sulfate adenylyltransferase subunit 2 [Mycobacterium abscessus
ATCC 19977]
gi|169240717|emb|CAM61745.1| Sulfate adenylate transferase, subunit 2 (CysD) [Mycobacterium
abscessus]
Length = 308
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
+LLFSGG+DS+ L AL F
Sbjct: 36 ERPVLLFSGGKDSTVLLHIALKAF 59
>gi|160892535|ref|ZP_02073325.1| hypothetical protein CLOL250_00064 [Clostridium sp. L2-50]
gi|156865576|gb|EDO59007.1| hypothetical protein CLOL250_00064 [Clostridium sp. L2-50]
Length = 362
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLS 39
+ + SGG DSS ++ V ++
Sbjct: 1 MDKKTVCVGMSGGVDSSVAAYLLKEQGYNVIGVT 34
>gi|84490240|ref|YP_448472.1| argininosuccinate synthase [Methanosphaera stadtmanae DSM 3091]
gi|119361292|sp|Q2NEC4|ASSY_METST RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|84373559|gb|ABC57829.1| ArgG [Methanosphaera stadtmanae DSM 3091]
Length = 392
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKI 60
+L FSGG D+S C+ ++++ V T D GQ + E++ +KI
Sbjct: 2 EKVVLAFSGGLDTSVCVKLLQEKYNMEVITACVDVGQ-PEDEIKKPEAAAQKI 53
>gi|21280318|dbj|BAB96811.1| probable sulfate adenylyltransferase subunit 2 [Rhodococcus
erythropolis]
Length = 317
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCVRKKIVELM 64
++LFSGG+DS+ L A+ F L D G + L+ R V + +
Sbjct: 45 ERPVILFSGGKDSTVLLHLAIKAFWPAPLPFTLLHVDTGHNLQEVLDFRDHV---VAKYN 101
Query: 65 PKWKDSLGEDHILP 78
+ + E++I
Sbjct: 102 LRLHVASVEEYIAD 115
>gi|325090353|gb|EGC43663.1| argininosuccinate synthetase [Ajellomyces capsulatus H88]
Length = 416
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ L +SGG D+S L+W +++ V D GQ + + I L
Sbjct: 1 MPAKQKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58
Query: 65 PKWKD 69
D
Sbjct: 59 LVVAD 63
>gi|319651666|ref|ZP_08005793.1| TrmU protein [Bacillus sp. 2_A_57_CT2]
gi|317396733|gb|EFV77444.1| TrmU protein [Bacillus sp. 2_A_57_CT2]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETL 38
+KK P ++ SGG DSS ++ V +
Sbjct: 1 MKKDPKDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|317491853|ref|ZP_07950288.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920287|gb|EFV41611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacteriaceae bacterium 9_2_54FAA]
Length = 367
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|293404489|ref|ZP_06648483.1| trmU [Escherichia coli FVEC1412]
gi|298380264|ref|ZP_06989869.1| tRNA-specific 2-thiouridylase mnmA [Escherichia coli FVEC1302]
gi|300896838|ref|ZP_07115333.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 198-1]
gi|300938705|ref|ZP_07153429.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 21-1]
gi|301024581|ref|ZP_07188253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 69-1]
gi|331646392|ref|ZP_08347495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli M605]
gi|281178243|dbj|BAI54573.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli SE15]
gi|291429075|gb|EFF02100.1| trmU [Escherichia coli FVEC1412]
gi|298279962|gb|EFI21470.1| tRNA-specific 2-thiouridylase mnmA [Escherichia coli FVEC1302]
gi|300359320|gb|EFJ75190.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 198-1]
gi|300396506|gb|EFJ80044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 69-1]
gi|300456350|gb|EFK19843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 21-1]
gi|331045144|gb|EGI17271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli M605]
Length = 383
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|227886510|ref|ZP_04004315.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 83972]
gi|300975599|ref|ZP_07173078.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 45-1]
gi|301051077|ref|ZP_07197911.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 185-1]
gi|227836714|gb|EEJ47180.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 83972]
gi|300297249|gb|EFJ53634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 185-1]
gi|300410262|gb|EFJ93800.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 45-1]
gi|315293099|gb|EFU52451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 153-1]
Length = 383
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|255693956|ref|ZP_05417631.1| GMP synthase domain protein [Bacteroides finegoldii DSM 17565]
gi|260620230|gb|EEX43101.1| GMP synthase domain protein [Bacteroides finegoldii DSM 17565]
Length = 435
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG--QRNKVE 49
LL SGG DSS + L D + + ++G +R + E
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDNLVCVHVNHGLMRRGESE 184
>gi|239827834|ref|YP_002950458.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus sp. WCH70]
gi|239808127|gb|ACS25192.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. WCH70]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN K ++ SGG DSS + V +
Sbjct: 1 MNKAPKDT-RVVVGMSGGVDSSVAALLLKQQGYDVIGI 37
>gi|311747046|ref|ZP_07720831.1| argininosuccinate synthase [Algoriphagus sp. PR1]
gi|126578747|gb|EAZ82911.1| argininosuccinate synthase [Algoriphagus sp. PR1]
Length = 397
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 9 PSALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVEL 50
+L +SGG D++ C L + + V + + G ++ EL
Sbjct: 2 KKVVLAYSGGLDTTFCALHLSKELGYEVHAVLVNTGGFSEEEL 44
>gi|94265042|ref|ZP_01288810.1| Thiamine biosynthesis protein [delta proteobacterium MLMS-1]
gi|93454475|gb|EAT04763.1| Thiamine biosynthesis protein [delta proteobacterium MLMS-1]
Length = 338
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+AL LFSGG DS+ +++ +V + F
Sbjct: 3 TALALFSGGLDSTLACRVMMEQGVKVVAVKF 33
>gi|91210289|ref|YP_540275.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli UTI89]
gi|117623318|ref|YP_852231.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli APEC O1]
gi|237706881|ref|ZP_04537362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia sp. 3_2_53FAA]
gi|300982382|ref|ZP_07176080.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 200-1]
gi|91071863|gb|ABE06744.1| probable ATPase YcfB [Escherichia coli UTI89]
gi|115512442|gb|ABJ00517.1| putative ATPase [Escherichia coli APEC O1]
gi|226898091|gb|EEH84350.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia sp. 3_2_53FAA]
gi|300307219|gb|EFJ61739.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 200-1]
gi|315287470|gb|EFU46881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 110-3]
gi|315296602|gb|EFU55897.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 16-3]
gi|324013226|gb|EGB82445.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 60-1]
Length = 383
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|300816836|ref|ZP_07097056.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 107-1]
gi|300821083|ref|ZP_07101232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 119-7]
gi|300906948|ref|ZP_07124620.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 84-1]
gi|300917906|ref|ZP_07134539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 115-1]
gi|300922663|ref|ZP_07138760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 182-1]
gi|300928309|ref|ZP_07143845.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 187-1]
gi|300949484|ref|ZP_07163481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 116-1]
gi|300955539|ref|ZP_07167901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 175-1]
gi|301306077|ref|ZP_07212155.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 124-1]
gi|301328492|ref|ZP_07221558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 78-1]
gi|301644551|ref|ZP_07244544.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 146-1]
gi|309796520|ref|ZP_07690927.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 145-7]
gi|331641677|ref|ZP_08342812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli H736]
gi|331652184|ref|ZP_08353203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli M718]
gi|331676926|ref|ZP_08377622.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli H591]
gi|332279679|ref|ZP_08392092.1| conserved hypothetical protein [Shigella sp. D9]
gi|300317578|gb|EFJ67362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 175-1]
gi|300401295|gb|EFJ84833.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 84-1]
gi|300414896|gb|EFJ98206.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 115-1]
gi|300421012|gb|EFK04323.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 182-1]
gi|300451104|gb|EFK14724.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 116-1]
gi|300463695|gb|EFK27188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 187-1]
gi|300526382|gb|EFK47451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 119-7]
gi|300530610|gb|EFK51672.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 107-1]
gi|300838649|gb|EFK66409.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 124-1]
gi|300845099|gb|EFK72859.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 78-1]
gi|301077133|gb|EFK91939.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 146-1]
gi|308119832|gb|EFO57094.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 145-7]
gi|315135765|dbj|BAJ42924.1| trmU [Escherichia coli DH1]
gi|315254893|gb|EFU34861.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 85-1]
gi|324017533|gb|EGB86752.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 117-3]
gi|331038475|gb|EGI10695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli H736]
gi|331050462|gb|EGI22520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli M718]
gi|331075615|gb|EGI46913.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli H591]
gi|332102031|gb|EGJ05377.1| conserved hypothetical protein [Shigella sp. D9]
Length = 383
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|81245791|gb|ABB66499.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 383
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|81241404|gb|ABB62114.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 383
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|12514787|gb|AAG55959.1|AE005329_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13361069|dbj|BAB35028.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209772838|gb|ACI84731.1| hypothetical protein ECs1605 [Escherichia coli]
gi|209772840|gb|ACI84732.1| hypothetical protein ECs1605 [Escherichia coli]
gi|209772842|gb|ACI84733.1| hypothetical protein ECs1605 [Escherichia coli]
gi|209772844|gb|ACI84734.1| hypothetical protein ECs1605 [Escherichia coli]
gi|209772846|gb|ACI84735.1| hypothetical protein ECs1605 [Escherichia coli]
Length = 383
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|332857065|ref|ZP_08436371.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii 6013150]
gi|332870003|ref|ZP_08438979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii 6013113]
gi|332726880|gb|EGJ58394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii 6013150]
gi|332732503|gb|EGJ63754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii 6013113]
Length = 381
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M +++ ++ SGG DSS + L + +VE L
Sbjct: 1 MPSPMQQ--RVIVGMSGGVDSSVSAALLLQQGYQVEGL 36
>gi|324005950|gb|EGB75169.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 57-2]
Length = 383
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|296161025|ref|ZP_06843836.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. Ch1-1]
gi|295888724|gb|EFG68531.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. Ch1-1]
Length = 381
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKQKVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|197303193|ref|ZP_03168235.1| hypothetical protein RUMLAC_01916 [Ruminococcus lactaris ATCC
29176]
gi|197297733|gb|EDY32291.1| hypothetical protein RUMLAC_01916 [Ruminococcus lactaris ATCC
29176]
Length = 358
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 5 KVVVGMSGGVDSSVAAWLLKEQGYDVIGVT 34
>gi|145612487|ref|XP_001412111.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145019644|gb|EDK03872.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 415
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ L +SGG D+ST L W +++ V + GQ + + + KK+
Sbjct: 6 VCLAYSGGLDTSTILVWLIEQGYTVVCFLANVGQ--EEDWDEVKAKAKKLGA 55
>gi|145612495|ref|XP_367244.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145019648|gb|EDK03876.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 415
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ L +SGG D+ST L W +++ V + GQ + + + KK+
Sbjct: 6 VCLAYSGGLDTSTILVWLIEQGYTVVCFLANVGQ--EEDWDEVKAKAKKLGA 55
>gi|332874746|ref|ZP_08442616.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii 6014059]
gi|332737007|gb|EGJ67964.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii 6014059]
Length = 381
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M +++ ++ SGG DSS + L + +VE L
Sbjct: 1 MPSPMQQ--RVIVGMSGGVDSSVSAALLLQQGYQVEGL 36
>gi|238920209|ref|YP_002933724.1| tRNA-specific 2-thiouridylase MnmA [Edwardsiella ictaluri 93-146]
gi|259495829|sp|C5B8B9|MNMA_EDWI9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|238869778|gb|ACR69489.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative [Edwardsiella ictaluri 93-146]
Length = 367
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|224536253|ref|ZP_03676792.1| hypothetical protein BACCELL_01120 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522139|gb|EEF91244.1| hypothetical protein BACCELL_01120 [Bacteroides cellulosilyticus
DSM 14838]
Length = 359
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLS 39
MN L+ SGG DS+ TCL ++ + L+
Sbjct: 1 MNSP---DKRVLVGMSGGIDSTATCL-MLKEQGYEIVGLT 36
>gi|313623686|gb|EFR93838.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria innocua FSL J1-023]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|313618826|gb|EFR90711.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria innocua FSL S4-378]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|315282423|ref|ZP_07870840.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria marthii FSL S4-120]
gi|313613928|gb|EFR87655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria marthii FSL S4-120]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|313608681|gb|EFR84517.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL F2-208]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|311069430|ref|YP_003974353.1| argininosuccinate synthase [Bacillus atrophaeus 1942]
gi|310869947|gb|ADP33422.1| argininosuccinate synthase [Bacillus atrophaeus 1942]
Length = 403
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W ++ V D G
Sbjct: 1 MAEQKKVVLAYSGGLDTSVAIKWLQEQGYDVIACCLDVG 39
>gi|296131746|ref|YP_003638993.1| tRNA(Ile)-lysidine synthetase [Thermincola sp. JR]
gi|296030324|gb|ADG81092.1| tRNA(Ile)-lysidine synthetase [Thermincola potens JR]
Length = 471
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 40/138 (28%), Gaps = 20/138 (14%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIV 61
+++ ++ SGG DS L+ L R + L+ G + + +
Sbjct: 13 KMLEPGDKVVVGVSGGPDS-VALAHILTRLAKEFRLTIHIGHLNHMFRGKEAELDAASVA 71
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L K + I A L + S+ ++ F
Sbjct: 72 RLAEKLGLPCTVERIDVPAYLSEHRVSAQAGARYIRYA---------------FFE---K 113
Query: 122 LAYRLGITNIVIGVCETD 139
LA +G I G D
Sbjct: 114 LADEVGANRIATGHHADD 131
>gi|269139398|ref|YP_003296099.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Edwardsiella tarda EIB202]
gi|267985059|gb|ACY84888.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Edwardsiella tarda EIB202]
gi|304559294|gb|ADM41958.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Edwardsiella tarda FL6-60]
Length = 367
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|257460244|ref|ZP_05625347.1| thiamine biosynthesis protein:ExsB [Campylobacter gracilis
RM3268]
gi|257442309|gb|EEV17449.1| thiamine biosynthesis protein:ExsB [Campylobacter gracilis
RM3268]
Length = 327
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + + V L+ D G
Sbjct: 2 KALALFSGGLDSMLAVKLIVSQGIEVLALNMDIG 35
>gi|255522399|ref|ZP_05389636.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes FSL
J1-175]
Length = 168
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|255023815|ref|ZP_05295801.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes FSL
J1-208]
Length = 291
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|290893871|ref|ZP_06556849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL J2-071]
gi|290556588|gb|EFD90124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL J2-071]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|288869783|ref|ZP_05976300.2| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
gi|288860221|gb|EFC92519.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
Length = 343
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 2 NDIIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+++ K++ A++ SGG DSS L A ++ D
Sbjct: 132 SNVFKESEKTEAVVALSGGVDSSFSLILAKYLGFNPTAVTID 173
>gi|217964341|ref|YP_002350019.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes HCC23]
gi|254811452|sp|B8DDZ8|MNMA_LISMH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|217333611|gb|ACK39405.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes HCC23]
gi|307571093|emb|CAR84272.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes L99]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|254829729|ref|ZP_05234384.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes
10403S]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|148642250|ref|YP_001272763.1| ATPase [Methanobrevibacter smithii ATCC 35061]
gi|222444577|ref|ZP_03607092.1| hypothetical protein METSMIALI_00189 [Methanobrevibacter smithii
DSM 2375]
gi|148551267|gb|ABQ86395.1| predicted ATPase [Methanobrevibacter smithii ATCC 35061]
gi|222434142|gb|EEE41307.1| hypothetical protein METSMIALI_00189 [Methanobrevibacter smithii
DSM 2375]
Length = 343
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 2 NDIIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+++ K++ A++ SGG DSS L A ++ D
Sbjct: 132 SNVFKESEKTEAVVALSGGVDSSFSLILAKYLGFNPTAVTID 173
>gi|116872941|ref|YP_849722.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Listeria welshimeri serovar 6b str. SLCC5334]
gi|123461086|sp|A0AIW1|MNMA_LISW6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|116741819|emb|CAK20943.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria welshimeri serovar 6b str. SLCC5334]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|110835125|ref|YP_693984.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alcanivorax borkumensis SK2]
gi|110648236|emb|CAL17712.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alcanivorax borkumensis SK2]
Length = 361
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 1 MNDIIKK-APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
M + + A+ L SGG DS + D+ VE ++F
Sbjct: 1 MTEASQPIKRRAIALVSGGLDSMLAVKVMQDQGIEVEGVNF 41
>gi|46907740|ref|YP_014129.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes
serotype 4b str. F2365]
gi|226224113|ref|YP_002758220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes Clip81459]
gi|254824429|ref|ZP_05229430.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL J1-194]
gi|254852136|ref|ZP_05241484.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL R2-503]
gi|254931447|ref|ZP_05264806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes HPB2262]
gi|254993966|ref|ZP_05276156.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes FSL
J2-064]
gi|300764822|ref|ZP_07074812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL N1-017]
gi|67461977|sp|Q71ZF8|MNMA_LISMF RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|259495831|sp|C1KVF9|MNMA_LISMC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|46881009|gb|AAT04306.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes serotype 4b str. F2365]
gi|225876575|emb|CAS05284.1| Putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|258605439|gb|EEW18047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL R2-503]
gi|293582998|gb|EFF95030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes HPB2262]
gi|293593665|gb|EFG01426.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL J1-194]
gi|300514498|gb|EFK41555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL N1-017]
gi|328465550|gb|EGF36779.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes 1816]
gi|328474873|gb|EGF45673.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes 220]
gi|332311954|gb|EGJ25049.1| tRNA-specific 2-thiouridylase mnmA [Listeria monocytogenes str.
Scott A]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|16082141|ref|NP_394578.1| hypothetical protein Ta1119 [Thermoplasma acidophilum DSM 1728]
gi|10640432|emb|CAC12246.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 314
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 23/135 (17%)
Query: 13 LLFSGGQDSSTCLSWA-----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ SGG+DSS L R + + D E R +E K
Sbjct: 53 VAISGGKDSSVTLYLLHKILSKRRNVELTAFTVD---------EGISGYRPAGLESAIKL 103
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV-PGRNIIFLVFAATLAYRL 126
LG DH + + +T + + + +P ++ P R + A R
Sbjct: 104 TKMLGVDHSI-IRFQDSFG---MTLDSIVGADASRIPCSYCGPLRRKLINEM----AERQ 155
Query: 127 GITNIVIGVCETDYS 141
+ +G+ DYS
Sbjct: 156 NADYVALGLNLDDYS 170
>gi|16800615|ref|NP_470883.1| tRNA-specific 2-thiouridylase MnmA [Listeria innocua Clip11262]
gi|24638323|sp|Q92BK1|MNMA_LISIN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|16414020|emb|CAC96778.1| lin1547 [Listeria innocua Clip11262]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|238789081|ref|ZP_04632870.1| tRNA-specific 2-thiouridylase mnmA [Yersinia frederiksenii ATCC
33641]
gi|238722845|gb|EEQ14496.1| tRNA-specific 2-thiouridylase mnmA [Yersinia frederiksenii ATCC
33641]
Length = 373
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|16803552|ref|NP_465037.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes EGD-e]
gi|47097209|ref|ZP_00234773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes str. 1/2a F6854]
gi|224500677|ref|ZP_03669026.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes
Finland 1988]
gi|224501548|ref|ZP_03669855.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes FSL
R2-561]
gi|254828254|ref|ZP_05232941.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL N3-165]
gi|254898322|ref|ZP_05258246.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes J0161]
gi|254912186|ref|ZP_05262198.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes J2818]
gi|254936514|ref|ZP_05268211.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes F6900]
gi|284801902|ref|YP_003413767.1| hypothetical protein LM5578_1657 [Listeria monocytogenes 08-5578]
gi|284995044|ref|YP_003416812.1| hypothetical protein LM5923_1609 [Listeria monocytogenes 08-5923]
gi|24638317|sp|Q8Y714|MNMA_LISMO RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|16410941|emb|CAC99590.1| lmo1512 [Listeria monocytogenes EGD-e]
gi|47014423|gb|EAL05392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes str. 1/2a F6854]
gi|258600642|gb|EEW13967.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes FSL N3-165]
gi|258609108|gb|EEW21716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes F6900]
gi|284057464|gb|ADB68405.1| hypothetical protein LM5578_1657 [Listeria monocytogenes 08-5578]
gi|284060511|gb|ADB71450.1| hypothetical protein LM5923_1609 [Listeria monocytogenes 08-5923]
gi|293590159|gb|EFF98493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria monocytogenes J2818]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHILKEQGYDVIGI 37
>gi|332188159|ref|ZP_08389888.1| argininosuccinate synthase [Sphingomonas sp. S17]
gi|332011766|gb|EGI53842.1| argininosuccinate synthase [Sphingomonas sp. S17]
Length = 406
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + +L +SGG D+S L W + V T + D GQ ++E R V+
Sbjct: 1 MSEDIKRVVLAYSGGLDTSVILKWLQQHYGCEVVTFTADLGQGEELE-PARKKAEMAGVK 59
Query: 63 LMPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 60 PEHIFIDDLREEFVKD 75
>gi|330999472|ref|ZP_08323186.1| argininosuccinate synthase [Parasutterella excrementihominis YIT
11859]
gi|329574898|gb|EGG56457.1| argininosuccinate synthase [Parasutterella excrementihominis YIT
11859]
Length = 445
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
Query: 1 MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
M I+K P + FSGG D+ST L W + + + GQ + + +
Sbjct: 1 METILKSLPIGEKVGIAFSGGLDTSTALLWMKKKGAFPCAYTANLGQ---PDEDDYEAIP 57
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLT 91
+K ++ + L + I ++
Sbjct: 58 RKAMDFGASIARLVDCREQLVAEGIAAIQSNAFH 91
>gi|330508540|ref|YP_004384968.1| hypothetical protein MCON_2761 [Methanosaeta concilii GP-6]
gi|328929348|gb|AEB69150.1| conserved hypothetical protein TIGR00269 [Methanosaeta concilii
GP-6]
Length = 308
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 27/148 (18%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECRLCV 56
+N +I+K + SGG+DS+ L ++ + L+ D E
Sbjct: 40 VNRMIEKGERIAVAVSGGKDSTALLFALSRVLAEKEVEMVALTVD---------EGIAGY 90
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGR-NI 113
R + + +G + ++ ++ + S V ++ P T+ V R N
Sbjct: 91 RDDTIVAAKRIARQMGVEQVI-ISFQEEYGWSLDEMVVGAEVA----PCTYCGV-FRKNA 144
Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYS 141
L A A LG+T + G + D +
Sbjct: 145 --LNCA---AKSLGVTKLATGHNQDDEA 167
>gi|303256132|ref|ZP_07342149.1| argininosuccinate synthase [Burkholderiales bacterium 1_1_47]
gi|302861102|gb|EFL84176.1| argininosuccinate synthase [Burkholderiales bacterium 1_1_47]
Length = 445
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
Query: 1 MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
M I+K P + FSGG D+ST L W + + + GQ + + +
Sbjct: 1 METILKSLPIGEKVGIAFSGGLDTSTALLWMKKKGAFPCAYTANLGQ---PDEDDYEAIP 57
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLT 91
+K ++ + L + I ++
Sbjct: 58 RKAMDFGASIARLVDCREQLVAEGIAAIQSNAFH 91
>gi|297617305|ref|YP_003702464.1| Queuosine synthesis [Syntrophothermus lipocalidus DSM 12680]
gi|297145142|gb|ADI01899.1| Queuosine synthesis [Syntrophothermus lipocalidus DSM 12680]
Length = 326
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
A+ LFSGG DS + ++ V F
Sbjct: 2 KAVSLFSGGLDSQLAVCVVKEQGIEVVGAHF 32
>gi|312140300|ref|YP_004007636.1| sulfate adenylyltransferase subunit 2 cysd [Rhodococcus equi
103S]
gi|325677126|ref|ZP_08156795.1| sulfate adenylyltransferase subunit 2 [Rhodococcus equi ATCC
33707]
gi|311889639|emb|CBH48956.1| sulfate adenylyltransferase subunit 2 CysD [Rhodococcus equi
103S]
gi|325552111|gb|EGD21804.1| sulfate adenylyltransferase subunit 2 [Rhodococcus equi ATCC
33707]
Length = 313
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
++LFSGG+DS+ L A+ F
Sbjct: 41 ERPVILFSGGKDSTVLLHLAIKAF 64
>gi|226360387|ref|YP_002778165.1| sulfate adenylyltransferase subunit 2 [Rhodococcus opacus B4]
gi|226238872|dbj|BAH49220.1| sulfate adenylyltransferase subunit 2 [Rhodococcus opacus B4]
Length = 317
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
++LFSGG+DS+ L A+ F
Sbjct: 45 ERPVILFSGGKDSTVLLHLAIKAF 68
>gi|111018263|ref|YP_701235.1| sulfate adenylyltransferase subunit 2 [Rhodococcus jostii RHA1]
gi|110817793|gb|ABG93077.1| sulfate adenylyltransferase small subunit [Rhodococcus jostii
RHA1]
Length = 317
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
++LFSGG+DS+ L A+ F
Sbjct: 45 ERPVILFSGGKDSTVLLHLAIKAF 68
>gi|91781835|ref|YP_557041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia xenovorans LB400]
gi|123359156|sp|Q145K0|MNMA_BURXL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|91685789|gb|ABE28989.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia xenovorans LB400]
Length = 381
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKQKVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|78188748|ref|YP_379086.1| argininosuccinate synthase [Chlorobium chlorochromatii CaD3]
gi|119361262|sp|Q3ASI2|ASSY_CHLCH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|78170947|gb|ABB28043.1| argininosuccinate synthase [Chlorobium chlorochromatii CaD3]
Length = 399
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
+ K A+ SGG D+S + W D++D + ++ + GQ+ ++E
Sbjct: 1 MSKEKIAIAY-SGGLDTSVMIKWLKDKYDADIVAVTGNLGQQKEIE 45
>gi|26107782|gb|AAN79981.1|AE016759_255 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli CFT073]
Length = 383
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 15 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 50
>gi|311087577|gb|ADP67656.1| cell cycle protein MesJ [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 398
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFD 41
+ S L+ +SGG DS+ L + ++ + +
Sbjct: 10 QNKSFLVAYSGGLDSTVLLYKLLEIKKKYYIKIRAIHIN 48
>gi|311087006|gb|ADP67086.1| cell cycle protein MesJ [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 440
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFD 41
+ S L+ +SGG DS+ L + ++ + +
Sbjct: 10 QNKSFLVAYSGGLDSTVLLYKLLEIKKKYYIKIRAIHIN 48
>gi|240103911|ref|YP_002960220.1| ATP-binding protein, PP-loop superfamily [Thermococcus
gammatolerans EJ3]
gi|239911465|gb|ACS34356.1| ATP-binding protein, PP-loop superfamily [Thermococcus
gammatolerans EJ3]
Length = 244
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL---------SFDYG--QRNKVELECRL 54
+L+SGG+DS+ L WAL++ V+ L S+ Y + EL+ R
Sbjct: 8 VLYSGGKDSNYALYWALEQGFEVKYLVSMVSEREDSYMYHVPNIHLTELQARA 60
>gi|219681486|ref|YP_002467871.1| cell cycle protein MesJ [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682042|ref|YP_002468426.1| cell cycle protein MesJ [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471165|ref|ZP_05635164.1| cell cycle protein MesJ [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|219621775|gb|ACL29931.1| cell cycle protein MesJ [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624329|gb|ACL30484.1| cell cycle protein MesJ [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311085853|gb|ADP65935.1| cell cycle protein MesJ [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086423|gb|ADP66504.1| cell cycle protein MesJ [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 440
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFD 41
+ S L+ +SGG DS+ L + ++ + +
Sbjct: 10 QNKSFLVAYSGGLDSTVLLYKLLEIKKKYYIKIRAIHIN 48
>gi|209519013|ref|ZP_03267821.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. H160]
gi|209500525|gb|EEA00573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. H160]
Length = 416
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRKVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|193215134|ref|YP_001996333.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chloroherpeton thalassium ATCC 35110]
gi|193088611|gb|ACF13886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chloroherpeton thalassium ATCC 35110]
Length = 365
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + V ++
Sbjct: 1 MKKKVIVGMSGGVDSSVAACLLAEEGFEVIGVT 33
>gi|15616731|ref|NP_239943.1| cell cycle protein MesJ [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11386907|sp|P57211|TILS_BUCAI RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|25325269|pir||E84942 cell cycle protein mesJ [imported] - Buchnera sp. (strain APS)
gi|10038794|dbj|BAB12829.1| cell cycle protein mesJ [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 440
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFD 41
+ S L+ +SGG DS+ L + ++ + +
Sbjct: 10 QNKSFLVAYSGGLDSTVLLYKLLEIKKKYYIKIRAIHIN 48
>gi|16081736|ref|NP_394121.1| argininosuccinate synthase [Thermoplasma acidophilum DSM 1728]
gi|10639936|emb|CAC11788.1| probable argininosuccinate synthase [Thermoplasma acidophilum]
Length = 405
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 16/131 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ALLL+SGG D+S + W + V TL+ + G + V +E + +
Sbjct: 1 MFAMDKALLLYSGGLDTSVMIKWIQENLSMDVATLTLNVGNSDLVAIEEKARM------- 53
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
LG D + + + + K++ P + R + A A
Sbjct: 54 -------LGADPVFVHDAKDEFAEKFIAKSIMANGSYEGYPLSTALAR-PLMAEKAVKYA 105
Query: 124 YRLGITNIVIG 134
++G IV G
Sbjct: 106 QKIGAKYIVHG 116
>gi|269986461|gb|EEZ92746.1| asparagine synthase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 263
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
I+K P + +L SGG DSS + A+ +F ++ +S
Sbjct: 23 SILKAKPDS-VLVSGGIDSSVLAAIAITKFKGIKLIS 58
>gi|229019618|ref|ZP_04176430.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH1273]
gi|228741666|gb|EEL91854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH1273]
Length = 376
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|172087739|ref|YP_205328.2| tRNA(Ile)-lysidine synthetase [Vibrio fischeri ES114]
gi|171902329|gb|AAW86440.2| tRNA(Ile)-lysidine synthetase [Vibrio fischeri ES114]
Length = 456
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 7 KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYG---QRNKVELECR 53
K P ++ SGG DS L +A ++ + ++G N E+ C
Sbjct: 30 KKPHLIVALSGGVDSMVLLRLAGMYAKEKQLECMAVHVNHGLSLHANDWEVSCA 83
>gi|261880940|ref|ZP_06007367.1| argininosuccinate synthase [Prevotella bergensis DSM 17361]
gi|270332327|gb|EFA43113.1| argininosuccinate synthase [Prevotella bergensis DSM 17361]
Length = 412
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 41/195 (21%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ FSGG D S T + A D V + G + +L+ K+
Sbjct: 14 MKKKVVVAFSGGLDTSYTVMKLAHD-GWDVYAACANTGGFSAEQLKTNEENAYKLGATKY 72
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + L I G++ ++ + + IF A
Sbjct: 73 ATLDVTQEYYEKSLKYMIFGNVLRNNC---YPISVSSER-----------IFQAIAIARY 118
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
A +G I G + G + T L+ E
Sbjct: 119 ANEIGADAIAHG----------------------STGAGNDQIRFDMTFLVMAPGVEIIT 156
Query: 183 LAQDIGGQDLVNLIL 197
L +D +
Sbjct: 157 LTRDHALSRQEEVDY 171
>gi|238749636|ref|ZP_04611141.1| tRNA-specific 2-thiouridylase mnmA [Yersinia rohdei ATCC 43380]
gi|238712291|gb|EEQ04504.1| tRNA-specific 2-thiouridylase mnmA [Yersinia rohdei ATCC 43380]
Length = 373
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|238754412|ref|ZP_04615768.1| tRNA-specific 2-thiouridylase mnmA [Yersinia ruckeri ATCC 29473]
gi|238707445|gb|EEP99806.1| tRNA-specific 2-thiouridylase mnmA [Yersinia ruckeri ATCC 29473]
Length = 371
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|218899565|ref|YP_002447976.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus G9842]
gi|218543622|gb|ACK96016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus G9842]
Length = 372
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 1 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 38
>gi|149194412|ref|ZP_01871509.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caminibacter mediatlanticus TB-2]
gi|149135587|gb|EDM24066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Caminibacter mediatlanticus TB-2]
Length = 339
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 19/56 (33%), Gaps = 8/56 (14%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-----GQRNKVELECRLCVRKKI 60
L+ SGG DS+ V + Y G + L+ + KKI
Sbjct: 2 RVLVGVSGGVDSAVTTYLLKKAGYEVIGI---YLKMHSGVNHSENLKKIEKLSKKI 54
>gi|110677812|ref|YP_680819.1| argininosuccinate synthase [Roseobacter denitrificans OCh 114]
gi|119361317|sp|Q16D10|ASSY_ROSDO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|109453928|gb|ABG30133.1| argininosuccinate synthase [Roseobacter denitrificans OCh 114]
Length = 406
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARAKAEMMGA 57
>gi|57642215|ref|YP_184693.1| ATP-binding protein [Thermococcus kodakarensis KOD1]
gi|57160539|dbj|BAD86469.1| ATP-binding protein [Thermococcus kodakarensis KOD1]
Length = 228
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL---------SFDYG--QRNKVELECRL 54
+L+SGG+DS+ L WAL + V+ L S+ Y + EL+ R
Sbjct: 5 VLYSGGKDSNYALYWALKQGFEVKYLVSMVSESDESYMYHVPNIHLTELQARA 57
>gi|319406422|emb|CBI80062.1| Argininosuccinate synthase [Bartonella sp. 1-1C]
Length = 407
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL- 63
K +L +SGG D+S L W + + T + D GQ ++EL + E+
Sbjct: 5 KDIKKVVLAYSGGLDTSIILKWLQNELGAEIVTFTADLGQGEELELARHKAEMLGVKEIY 64
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ + + ++
Sbjct: 65 IEDLREEFVRDFVFPMFRANTVYEGAYLLGTSIA 98
>gi|229198523|ref|ZP_04325227.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus m1293]
gi|228585026|gb|EEK43140.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus m1293]
Length = 376
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|227515257|ref|ZP_03945306.1| PP-loop superfamily ATP-binding protein [Lactobacillus fermentum
ATCC 14931]
gi|227086386|gb|EEI21698.1| PP-loop superfamily ATP-binding protein [Lactobacillus fermentum
ATCC 14931]
Length = 278
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 66/207 (31%), Gaps = 45/207 (21%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRK 58
+ + +K ++ FSGG DS+ L ALD D V + + E L
Sbjct: 11 LQNTLKAYNRVVVGFSGGIDSTVVLKEALDVLGHDNVLAVVAN--------SELFLDAEY 62
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
++ + K + L I H++ AMK +F
Sbjct: 63 EMAGQLAKDMGAQVTGIQLDYLANDQIKHNTPESWYAMKQ---------------MFYQA 107
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLK 176
+A + ++ G+ D + + R L +PL L
Sbjct: 108 MTQVATQFNADAVLDGMIMDDNADF---RP----------GLRARDEAGAVSPLQTADLY 154
Query: 177 KYETWKLAQDIGGQDLVNLILEESHTC 203
K E +LAQ +G + + +C
Sbjct: 155 KREVRELAQSLGLTNWNKVA-----SC 176
>gi|169351463|ref|ZP_02868401.1| hypothetical protein CLOSPI_02243 [Clostridium spiroforme DSM
1552]
gi|169291685|gb|EDS73818.1| hypothetical protein CLOSPI_02243 [Clostridium spiroforme DSM
1552]
Length = 414
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE 51
++ SGG DS L + R+ +Y RN +L+
Sbjct: 15 VVGVSGGCDSMALLDIMQKKGYRMVVCHVNYHLRNDSDLD 54
>gi|89052558|ref|YP_508009.1| argininosuccinate synthase [Jannaschia sp. CCS1]
gi|119361282|sp|Q28WC8|ASSY_JANSC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|88862107|gb|ABD52984.1| argininosuccinate synthase [Jannaschia sp. CCS1]
Length = 407
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAEMMGA- 57
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 58 AGIYVEDLREEFVRD 72
>gi|92118967|ref|YP_578696.1| tRNA(Ile)-lysidine synthetase-like [Nitrobacter hamburgensis X14]
gi|91801861|gb|ABE64236.1| tRNA(Ile)-lysidine synthetase-like protein [Nitrobacter
hamburgensis X14]
Length = 345
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 55/206 (26%), Gaps = 53/206 (25%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALD------RFDRVETLSFDYGQRNKVELECRLCVRKK 59
KA AL+L SGG DS+ + A R + ++ D+G R E R
Sbjct: 22 KAAHALVLGVSGGPDSTALMWLAARWRRAMTRGPDLIAVTVDHGLRPGSAREARD----- 76
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ SLG H T + + LP R
Sbjct: 77 ----VKHLATSLGMRH--------------RTVRWSGAKPKSGLPAAARDAR----YRLL 114
Query: 120 ATLAYRLGITNIVIGVCETD-----------YSGYPDCRHDTIRAIETAINLGMESHVTV 168
A A G ++ D SG I + M +
Sbjct: 115 AKTARANGALHVFTAHTRDDQAETVLMRISRGSG--------ITGLSAMARETMRDGFIL 166
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVN 194
PL+ + K + G +
Sbjct: 167 ARPLLHVSKSRLIATLEKAGIAYAED 192
>gi|75908289|ref|YP_322585.1| argininosuccinate synthase [Anabaena variabilis ATCC 29413]
gi|119361258|sp|Q3MBE6|ASSY_ANAVT RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|75702014|gb|ABA21690.1| argininosuccinate synthase [Anabaena variabilis ATCC 29413]
Length = 400
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 17/133 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +A +L +SGG D+S C+ + + + V TL+ D GQ +++E ++ E
Sbjct: 1 MGRAKKVVLAYSGGVDTSVCIPYLKQEWGVEEVITLAADLGQGDELEPIREKALKSGASE 60
Query: 63 -LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
L+ K+S +D+ P + + A+ +
Sbjct: 61 SLVADVKESFIKDYAFPAIQANALYENRYPLGTALARP--------------LIAKILVE 106
Query: 122 LAYRLGITNIVIG 134
A + G I G
Sbjct: 107 AAEKYGADAIAHG 119
>gi|68536810|ref|YP_251515.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Corynebacterium jeikeium K411]
gi|91206802|sp|Q4JTG0|GUAA_CORJK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|68264409|emb|CAI37897.1| GMP synthase [Corynebacterium jeikeium K411]
Length = 529
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 26/201 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
+ + I A+ SGG DS+ + DR+ + D+G E R V K
Sbjct: 218 VREQIGDEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGE---REQVEKD 274
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
V ++ E A L ++ + + I + + R A
Sbjct: 275 FVAATGAKLVTVDERE----AFLQKLAGVTEPEAKRKAIGAEFIRSFE---R-----AVA 322
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPD-------CRHDTIRAIETAINLGMESHVTVHTPL 172
LA +++ V T YPD I++ L + + PL
Sbjct: 323 GVLADAPEGSSVDFLVQGT---LYPDVVESGGGTGTANIKSHHNVGGLPDDVEFELVEPL 379
Query: 173 MWLKKYETWKLAQDIGGQDLV 193
L K E + +++G + +
Sbjct: 380 RLLFKDEVRAVGRELGLPEEI 400
>gi|291558301|emb|CBL35418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium siraeum V10Sc8a]
Length = 358
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
A++ SGG DSS R ++
Sbjct: 1 MNNKAVIAMSGGVDSSVAAYLMKQRVFDCIGVT 33
>gi|307728482|ref|YP_003905706.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. CCGE1003]
gi|307583017|gb|ADN56415.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. CCGE1003]
Length = 385
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKQKVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|261200809|ref|XP_002626805.1| argininosuccinate synthase [Ajellomyces dermatitidis SLH14081]
gi|239593877|gb|EEQ76458.1| argininosuccinate synthase [Ajellomyces dermatitidis SLH14081]
gi|327357917|gb|EGE86774.1| argininosuccinate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 416
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ L +SGG D+S L+W ++R V D GQ + R +
Sbjct: 1 MPAKERVCLAYSGGLDTSCILAWLIERGYDVVCFLADVGQAEDFKEAERKAL 52
>gi|238783798|ref|ZP_04627817.1| tRNA-specific 2-thiouridylase mnmA [Yersinia bercovieri ATCC
43970]
gi|238715349|gb|EEQ07342.1| tRNA-specific 2-thiouridylase mnmA [Yersinia bercovieri ATCC
43970]
Length = 373
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|238762225|ref|ZP_04623197.1| tRNA-specific 2-thiouridylase mnmA [Yersinia kristensenii ATCC
33638]
gi|238699572|gb|EEP92317.1| tRNA-specific 2-thiouridylase mnmA [Yersinia kristensenii ATCC
33638]
Length = 373
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +V L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAYLLQQQGYQVAGL 36
>gi|229822980|ref|ZP_04449050.1| hypothetical protein GCWU000282_00272 [Catonella morbi ATCC
51271]
gi|229787793|gb|EEP23907.1| hypothetical protein GCWU000282_00272 [Catonella morbi ATCC
51271]
Length = 375
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETL 38
+ ++L SGG DSS ++ V L
Sbjct: 1 MSTNGKRVVLGMSGGVDSSVAALLLKEQGYEVIGL 35
>gi|228902924|ref|ZP_04067065.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis IBL 4222]
gi|228967471|ref|ZP_04128500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar sotto str. T04001]
gi|228792248|gb|EEM39821.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar sotto str. T04001]
gi|228856708|gb|EEN01227.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis IBL 4222]
Length = 376
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|228993134|ref|ZP_04153056.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus pseudomycoides DSM 12442]
gi|228999183|ref|ZP_04158765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus mycoides Rock3-17]
gi|229006731|ref|ZP_04164365.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus mycoides Rock1-4]
gi|228754592|gb|EEM04003.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus mycoides Rock1-4]
gi|228760800|gb|EEM09764.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus mycoides Rock3-17]
gi|228766593|gb|EEM15234.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus pseudomycoides DSM 12442]
Length = 376
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|196034345|ref|ZP_03101754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus W]
gi|195992887|gb|EDX56846.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus W]
Length = 372
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 1 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 38
>gi|163732978|ref|ZP_02140422.1| argininosuccinate synthase [Roseobacter litoralis Och 149]
gi|161393513|gb|EDQ17838.1| argininosuccinate synthase [Roseobacter litoralis Och 149]
Length = 406
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARAKAEMMGA 57
>gi|30022472|ref|NP_834103.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus ATCC 14579]
gi|206969454|ref|ZP_03230408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH1134]
gi|296504889|ref|YP_003666589.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis BMB171]
gi|29898030|gb|AAP11304.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Bacillus cereus ATCC 14579]
gi|206735142|gb|EDZ52310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH1134]
gi|296325941|gb|ADH08869.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis BMB171]
gi|326942178|gb|AEA18074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar chinensis CT-43]
Length = 372
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 1 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 38
>gi|332970936|gb|EGK09910.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Desmospora sp. 8437]
Length = 477
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 44/142 (30%), Gaps = 26/142 (18%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ ++ + S L+ SGG DS+ L A +V + ++G R E
Sbjct: 14 HHMLPEGSSVLVGVSGGPDSTALLHALSRIAPTHGWKVAAVHVNHGLRG----ENSRGDE 69
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
K + W+ + + +L + +++ FL
Sbjct: 70 KYVRTCCEHWQIPCHVEQVGVRQVLAQKGGNKQAVARSLRYAA--------------FLR 115
Query: 118 FAATLAYRLGITNIVIGVCETD 139
A R+G + + D
Sbjct: 116 V----ARRVGAECLALAHQADD 133
>gi|332158343|ref|YP_004423622.1| NAD synthetase [Pyrococcus sp. NA2]
gi|331033806|gb|AEC51618.1| NAD synthetase [Pyrococcus sp. NA2]
Length = 257
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 62/177 (35%), Gaps = 39/177 (22%)
Query: 20 DSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE-DHI 76
DS+T A +RV L Y K VE +SLG +
Sbjct: 34 DSATVAYLATKALGRERVLGLIMPY-------------FENKDVEDAKLVAESLGIGYKV 80
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
+ + + D +L + K N + T R +I L A+ + IV+G
Sbjct: 81 INIRPIVDSFRENLNLELDRKALGNIMART----R-MIIL-----YAHANSLGRIVLGTS 130
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
R + + T G + + PL+ L K E W++A+ IG + +
Sbjct: 131 ---------NRSEFLTGYFTKWGDG----ASDYAPLINLYKTEVWEIAKRIGVPERI 174
>gi|303232364|ref|ZP_07319057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Atopobium vaginae PB189-T1-4]
gi|302481548|gb|EFL44615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Atopobium vaginae PB189-T1-4]
Length = 392
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 41/138 (29%), Gaps = 9/138 (6%)
Query: 1 MNDIIKK--APSALLLF--SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
MN + A + SGG DS+ + + V + Y + +L C
Sbjct: 1 MNISMPTYAPKGATVYLGMSGGVDSACSAALLKEWGYTVHAV---YMRNWSRDLPGFTCR 57
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+ + +LG L + S++ + PN V I
Sbjct: 58 WADDLADAERVCVTLG--LTLDVWDCEQEYKSTVVDYLIDAYARGYTPNPDVMCNQTIKF 115
Query: 117 VFAATLAYRLGITNIVIG 134
A A+ G I G
Sbjct: 116 GTFAEKAFAHGADFIATG 133
>gi|300690463|ref|YP_003751458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia solanacearum PSI07]
gi|299077523|emb|CBJ50149.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia solanacearum PSI07]
Length = 370
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 4 KRVVVGMSGGVDSSVTAWLLKQQGYEVVGL 33
>gi|262305999|gb|ACY45592.1| gln amidotransferase [Armillifer armillatus]
Length = 196
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
K L+ SGG DSS C + +++ L D G
Sbjct: 42 KDRKVLVFLSGGVDSSVCAALLYKALPPNQIIALHIDNG 80
>gi|260893667|ref|YP_003239764.1| argininosuccinate synthase [Ammonifex degensii KC4]
gi|260865808|gb|ACX52914.1| argininosuccinate synthase [Ammonifex degensii KC4]
Length = 399
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
+L +SGG D+S + W + + V L+ D GQ + +R +
Sbjct: 1 MVKKVVLAYSGGLDTSIIIPWLKENYGYEVIALTVDLGQGEDLAAIREKALRSGAAKAYV 60
Query: 65 PKWKDSLGEDHILPLAILGDI 85
++ +++ P+ G I
Sbjct: 61 VDAREEFVREYVFPVLKAGAI 81
>gi|228923148|ref|ZP_04086439.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228941564|ref|ZP_04104113.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228954681|ref|ZP_04116704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228960668|ref|ZP_04122313.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar pakistani str. T13001]
gi|228974494|ref|ZP_04135061.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228981088|ref|ZP_04141389.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis Bt407]
gi|229048104|ref|ZP_04193677.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH676]
gi|229071905|ref|ZP_04205116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus F65185]
gi|229081661|ref|ZP_04214156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock4-2]
gi|229111869|ref|ZP_04241415.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock1-15]
gi|229129677|ref|ZP_04258645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BDRD-Cer4]
gi|229146967|ref|ZP_04275331.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BDRD-ST24]
gi|229152600|ref|ZP_04280789.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus m1550]
gi|229180672|ref|ZP_04308012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus 172560W]
gi|229192608|ref|ZP_04319569.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus ATCC 10876]
gi|228590915|gb|EEK48773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus ATCC 10876]
gi|228602817|gb|EEK60298.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus 172560W]
gi|228630861|gb|EEK87501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus m1550]
gi|228636566|gb|EEK93032.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BDRD-ST24]
gi|228653794|gb|EEL09664.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BDRD-Cer4]
gi|228671625|gb|EEL26923.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock1-15]
gi|228701665|gb|EEL54156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock4-2]
gi|228711201|gb|EEL63165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus F65185]
gi|228723259|gb|EEL74631.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH676]
gi|228778629|gb|EEM26895.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis Bt407]
gi|228785211|gb|EEM33223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228799032|gb|EEM46004.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar pakistani str. T13001]
gi|228805008|gb|EEM51604.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228818120|gb|EEM64196.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228836527|gb|EEM81877.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 376
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|255658227|ref|ZP_05403636.1| argininosuccinate synthase [Mitsuokella multacida DSM 20544]
gi|260849537|gb|EEX69544.1| argininosuccinate synthase [Mitsuokella multacida DSM 20544]
Length = 403
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQ 44
+ K +L +SGG D+S + W + +D V + D GQ
Sbjct: 1 MAKIKKVVLAYSGGLDTSVIIPWLKEHYDGCEVIAVCADVGQ 42
>gi|254486957|ref|ZP_05100162.1| argininosuccinate synthase [Roseobacter sp. GAI101]
gi|214043826|gb|EEB84464.1| argininosuccinate synthase [Roseobacter sp. GAI101]
Length = 406
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARAKAEMMGA 57
>gi|170691401|ref|ZP_02882566.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia graminis C4D1M]
gi|170143606|gb|EDT11769.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia graminis C4D1M]
Length = 381
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKQKVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|158337356|ref|YP_001518531.1| argininosuccinate synthase [Acaryochloris marina MBIC11017]
gi|189046379|sp|B0CCQ2|ASSY_ACAM1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|158307597|gb|ABW29214.1| argininosuccinate synthase [Acaryochloris marina MBIC11017]
Length = 399
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +A +L +SGG D+S C+ + + + V TL+ D GQ +++E +RKK ++
Sbjct: 1 MGRAKKVVLAYSGGVDTSVCIPYLKHEWGVEEVITLAADLGQGDELE-----PIRKKALD 55
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII--FLVFAA 120
++ I+ + A + +N P + R +I LV A
Sbjct: 56 AGA-------AQSLIADGTESFIADYAFPAIQANALYENRYPLSTALARPLIAKLLVEA- 107
Query: 121 TLAYRLGITNIVIG 134
A G + G
Sbjct: 108 --AEIHGADAVAHG 119
>gi|84514902|ref|ZP_01002265.1| argininosuccinate synthase [Loktanella vestfoldensis SKA53]
gi|84511061|gb|EAQ07515.1| argininosuccinate synthase [Loktanella vestfoldensis SKA53]
Length = 405
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MTAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARAKAEMMGA 57
>gi|222823281|ref|YP_002574854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter lari RM2100]
gi|254811447|sp|B9KEW8|MNMA_CAMLR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|222538502|gb|ACM63603.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter lari RM2100]
Length = 338
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 24/132 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+ SGG DS+ + Y ++L + ++ ++ + K +
Sbjct: 2 KILVAMSGGVDSTVTAYKLKQAGHEIIG---CY-----MKLHGKPNYHEENIQKVEKVAN 53
Query: 70 SLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFA--ATL 122
LG HIL L + + + +D PN P R F+
Sbjct: 54 FLGIKYHILDL---QEDFKNQVYMPFINTYKDGKTPN---PCALCNR---FIKLGKLLEF 104
Query: 123 AYRLGITNIVIG 134
A LG + G
Sbjct: 105 AKSLGCEKLATG 116
>gi|332685708|ref|YP_004455482.1| thiamine biosynthesis protein ThiI [Melissococcus plutonius ATCC
35311]
gi|332369717|dbj|BAK20673.1| thiamine biosynthesis protein ThiI [Melissococcus plutonius ATCC
35311]
Length = 403
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE-LECRLCVRKKIV 61
L+ SGG DS ++ R +E + F E LE + K+
Sbjct: 182 LMLSGGIDSPVAGYLSMKRGVEIEAVHFSSPPYTSEEALEKAKNLAGKLA 231
>gi|229186636|ref|ZP_04313797.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BGSC 6E1]
gi|228596895|gb|EEK54554.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BGSC 6E1]
Length = 376
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|196044752|ref|ZP_03111986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus 03BB108]
gi|196024240|gb|EDX62913.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus 03BB108]
Length = 372
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 1 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 38
>gi|83310224|ref|YP_420488.1| argininosuccinate synthase [Magnetospirillum magneticum AMB-1]
gi|119361285|sp|Q2W896|ASSY_MAGMM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|82945065|dbj|BAE49929.1| Argininosuccinate synthase [Magnetospirillum magneticum AMB-1]
Length = 404
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S L W D++ V T + D GQ ++E R R ++ +
Sbjct: 6 KKVVLAYSGGLDTSIILRWLQDQYQCEVVTFTADLGQGEELE-PARAKARLMGIKEENIF 64
Query: 68 KDSLGEDHILP 78
D L E+ +
Sbjct: 65 IDDLREEFVRD 75
>gi|71900609|ref|ZP_00682735.1| PP-loop [Xylella fastidiosa Ann-1]
gi|71729603|gb|EAO31708.1| PP-loop [Xylella fastidiosa Ann-1]
Length = 299
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 59/203 (29%), Gaps = 57/203 (28%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+I+ ++ SGG+DS T L L L + V ++ +
Sbjct: 44 MIEANDKIMVCLSGGKDSYTLLDMLLQ-------------------LRAKAPVPFELTAV 84
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVP-----------GR 111
K H+LP + SS+ + QD T VP R
Sbjct: 85 NLDQKQPGFPKHVLPEYL------SSIGVPYHIIEQDTYSVVTRVVPEGKTLCALCSRMR 138
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDY-SGYPDCRHDTIRAIETAINLGM-------- 162
A G T I +G D + + + A GM
Sbjct: 139 RGAL----YAYAETQGFTKIALGHHRDDMVATF------FMNLFHHAKLSGMPPKLRSDN 188
Query: 163 ESHVTVHTPLMWLKKYETWKLAQ 185
HV + PL ++ + + A
Sbjct: 189 GKHVVIR-PLAYVSETDIIAYAD 210
>gi|323465368|gb|ADX77521.1| tRNA(Ile)-lysidine synthetase, putative [Staphylococcus
pseudintermedius ED99]
Length = 429
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 54/192 (28%), Gaps = 41/192 (21%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCV 56
M K ++ S G DS L L + ++ L +G R E E
Sbjct: 1 MQQNWKATDHIVVAVSTGIDSMVLLHQLLYDETLTYRQLTCLHVHHGLREASEQEATFIQ 60
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+P + L L+ + S M+ Q +
Sbjct: 61 HYCEQHDIPFYMKR------LDLSDVVAEGRSIQNDAREMRYQ-------WFD------- 100
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI---ETAINLGM-----ESHVTV 168
T+ ++L ++ E D R T +LGM + +
Sbjct: 101 ----TMMHQLDADGLLTAHHEDDQV-----ETVFYRLFTGKSTRSSLGMSTIEARNGYRL 151
Query: 169 HTPLMWLKKYET 180
+ PL+ K+
Sbjct: 152 YRPLLNTSKHVI 163
>gi|293409499|ref|ZP_06653075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B354]
gi|291469967|gb|EFF12451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B354]
Length = 395
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 27 PMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 62
>gi|288555376|ref|YP_003427311.1| (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Bacillus
pseudofirmus OF4]
gi|288546536|gb|ADC50419.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
[Bacillus pseudofirmus OF4]
Length = 367
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+KK P ++ SGG DSS ++ V +
Sbjct: 1 MKKRPEDTKVVVGMSGGVDSSVTALVLKEQGYDVIGI 37
>gi|326319478|ref|YP_004237150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidovorax avenae subsp. avenae ATCC 19860]
gi|323376314|gb|ADX48583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acidovorax avenae subsp. avenae ATCC 19860]
Length = 403
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 11/35 (31%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ + V +
Sbjct: 2 TASPKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGI 36
>gi|196039389|ref|ZP_03106695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus NVH0597-99]
gi|206976034|ref|ZP_03236944.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus H3081.97]
gi|217961886|ref|YP_002340456.1| tRNA-specific 2-thiouridylase MnmA [Bacillus cereus AH187]
gi|218905591|ref|YP_002453425.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH820]
gi|225866378|ref|YP_002751756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus 03BB102]
gi|196030016|gb|EDX68617.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus NVH0597-99]
gi|206745786|gb|EDZ57183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus H3081.97]
gi|217066211|gb|ACJ80461.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH187]
gi|218535576|gb|ACK87974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus AH820]
gi|225789110|gb|ACO29327.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus 03BB102]
Length = 372
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 1 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 38
>gi|153951972|ref|YP_001398910.1| hypothetical protein JJD26997_1992 [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939418|gb|ABS44159.1| thiamine biosynthesis protein:ExsB [Campylobacter jejuni subsp.
doylei 269.97]
Length = 349
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 24 KALALFSGGLDSMLAMKLITTQGIEVKALNINIG 57
>gi|119370299|sp|Q9HKF1|ASSY_THEAC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
Length = 402
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 16/127 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
ALLL+SGG D+S + W + V TL+ + G + V +E + +
Sbjct: 2 DKALLLYSGGLDTSVMIKWIQENLSMDVATLTLNVGNSDLVAIEEKARM----------- 50
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
LG D + + + + K++ P + R + A A ++G
Sbjct: 51 ---LGADPVFVHDAKDEFAEKFIAKSIMANGSYEGYPLSTALAR-PLMAEKAVKYAQKIG 106
Query: 128 ITNIVIG 134
IV G
Sbjct: 107 AKYIVHG 113
>gi|187922695|ref|YP_001894337.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia phytofirmans
PsJN]
gi|229486336|sp|B2SX74|MNMA_BURPP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|187713889|gb|ACD15113.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia phytofirmans PsJN]
Length = 383
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKQKVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|84687702|ref|ZP_01015575.1| PP-loop family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664285|gb|EAQ10776.1| PP-loop family protein [Rhodobacterales bacterium HTCC2654]
Length = 417
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 12 LLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECR----LCVRKKIVEL 63
++ SGG DS L A + V L+ D+G R++ E +C +
Sbjct: 24 VVAVSGGGDSMALLHVAQAWGRTQGKAVSALTVDHGLRDEAATEAARVAEICADLGVAHR 83
Query: 64 MPKWKDSLGE 73
W D G+
Sbjct: 84 TLDWPDWDGQ 93
>gi|307128600|ref|YP_003880630.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Sulcia muelleri CARI]
gi|306483062|gb|ADM89932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Sulcia muelleri CARI]
Length = 387
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY 42
++ SGG DSS + V + Y
Sbjct: 2 KRVIVGMSGGVDSSVAALLLKKKGYDVIGIYLKY 35
>gi|269794840|ref|YP_003314295.1| NAD+ synthetase [Sanguibacter keddieii DSM 10542]
gi|269097025|gb|ACZ21461.1| NAD+ synthetase [Sanguibacter keddieii DSM 10542]
Length = 553
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Query: 10 SALLL-FSGGQDSSTCLSWALDR--FDRVETLSF--DYGQRNKV----ELECRLCVRKKI 60
+++L SGG DS+ + D D V +S Y + +L R+ ++
Sbjct: 294 RSVVLGLSGGIDSALVAAICADAIGGDNVYGVSMPSTYSSEHSKDDALDLAKRIGAHYRV 353
Query: 61 VELMPKWKDSLGEDHILPLA 80
+ P GE + +A
Sbjct: 354 QPIAPMVDAFQGELDLQDVA 373
>gi|228917030|ref|ZP_04080590.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228842637|gb|EEM87725.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 376
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|237809242|ref|YP_002893682.1| thiamine biosynthesis protein ThiI [Tolumonas auensis DSM 9187]
gi|259518617|sp|C4LAC1|THII_TOLAT RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|237501503|gb|ACQ94096.1| thiamine biosynthesis/tRNA modification protein ThiI [Tolumonas
auensis DSM 9187]
Length = 485
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 31/195 (15%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L L SGG DS + R RV F+ G K++
Sbjct: 175 PLSTQEDVLSLISGGFDSGVASYLFIKRGSRVHYCFFNLGG------AAHEIGVKQVAYY 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + +++ + + + + + V R + + A+ +A
Sbjct: 229 L--WSKYSQSHKVKFVSVPFEPVVGEILEKIDNGLMG------VVLKR--MMMRAASRVA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYET 180
R+G+ +V G S +T NL + VT + PL+ K +
Sbjct: 279 ERMGVEALVTGESVGQVSS------------QTVTNLSVIDRVTDTLILRPLIVSDKQDI 326
Query: 181 WKLAQDIGGQDLVNL 195
A+ IG Q+
Sbjct: 327 IDQARAIGTQEFAET 341
>gi|158522502|ref|YP_001530372.1| argininosuccinate synthase [Desulfococcus oleovorans Hxd3]
gi|158511328|gb|ABW68295.1| Argininosuccinate synthase [Desulfococcus oleovorans Hxd3]
Length = 399
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELE 51
+ +L +SGG D+S L W ++ D V T S D GQ + EL+
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLIETHDCEVITFSADIGQ--EEELD 46
>gi|118479554|ref|YP_896705.1| tRNA-specific 2-thiouridylase MnmA [Bacillus thuringiensis str.
Al Hakam]
gi|228929441|ref|ZP_04092462.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228935717|ref|ZP_04098530.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228948110|ref|ZP_04110394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228987648|ref|ZP_04147762.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229093467|ref|ZP_04224570.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock3-42]
gi|229123937|ref|ZP_04253129.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus 95/8201]
gi|229141133|ref|ZP_04269675.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BDRD-ST26]
gi|229158012|ref|ZP_04286083.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus ATCC 4342]
gi|118418779|gb|ABK87198.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis str. Al Hakam]
gi|228625465|gb|EEK82221.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus ATCC 4342]
gi|228642411|gb|EEK98700.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus BDRD-ST26]
gi|228659239|gb|EEL14887.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus 95/8201]
gi|228689938|gb|EEL43742.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock3-42]
gi|228772108|gb|EEM20560.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228811468|gb|EEM57805.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228823955|gb|EEM69774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228830229|gb|EEM75845.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 376
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|54024871|ref|YP_119113.1| hypothetical protein nfa29020 [Nocardia farcinica IFM 10152]
gi|54016379|dbj|BAD57749.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 587
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 40/128 (31%), Gaps = 25/128 (19%)
Query: 13 LLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+L SGG DSS + A D+ V T S +G EL V
Sbjct: 248 VLLSGGIDSSLVTALAAKLHDQAVHTYSISFGADAPDELGYSGLVATHCH---------- 297
Query: 72 GEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+L + + + T + + D P T VP + L A +
Sbjct: 298 TRHRVLTVPGQTVAARLADTVGLLDSPVGD---PLT-VPN---LML------AEAVAADG 344
Query: 131 IVIGVCET 138
I + +
Sbjct: 345 IRVALNGE 352
>gi|54294275|ref|YP_126690.1| hypothetical protein lpl1340 [Legionella pneumophila str. Lens]
gi|81601380|sp|Q5WWV9|MNMA_LEGPL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|53754107|emb|CAH15580.1| hypothetical protein lpl1340 [Legionella pneumophila str. Lens]
Length = 361
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 7/129 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS ++ +VE L ++ Q + K + +
Sbjct: 1 MKAKVIVGMSGGVDSSVAAWLLKEQGYQVEGLFMKNWEQ---DDHNDYCPAAKDLADAQA 57
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
H + + + ++ + + PN V I A
Sbjct: 58 VCNQLRIPLHTVNFS--KEYWDRVFAYFLS-EYEKGRTPNPDVLCNKEIKFNAFLNYALT 114
Query: 126 LGITNIVIG 134
LG I G
Sbjct: 115 LGADYIATG 123
>gi|229086959|ref|ZP_04219116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock3-44]
gi|228696335|gb|EEL49163.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock3-44]
Length = 376
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|229098868|ref|ZP_04229804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock3-29]
gi|229105030|ref|ZP_04235684.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock3-28]
gi|229117893|ref|ZP_04247255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock1-3]
gi|228665550|gb|EEL21030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock1-3]
gi|228678407|gb|EEL32630.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock3-28]
gi|228684541|gb|EEL38483.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus cereus Rock3-29]
Length = 376
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|194246580|ref|YP_002004219.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Phytoplasma mali]
gi|193806937|emb|CAP18369.1| tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferase
[Candidatus Phytoplasma mali]
Length = 385
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + VE +
Sbjct: 1 MKKKVIIGLSGGVDSSVAALLLKQKGYLVEAV 32
>gi|165872748|ref|ZP_02217376.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0488]
gi|167636496|ref|ZP_02394793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0442]
gi|167638584|ref|ZP_02396860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0193]
gi|170689637|ref|ZP_02880819.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0465]
gi|170709396|ref|ZP_02899807.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0389]
gi|177653267|ref|ZP_02935519.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0174]
gi|190566853|ref|ZP_03019769.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis Tsiankovskii-I]
gi|227817175|ref|YP_002817184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. CDC 684]
gi|229601635|ref|YP_002868683.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0248]
gi|164711524|gb|EDR17073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0488]
gi|167513432|gb|EDR88802.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0193]
gi|167528089|gb|EDR90886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0442]
gi|170125695|gb|EDS94611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0389]
gi|170666407|gb|EDT17188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0465]
gi|172081549|gb|EDT66621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0174]
gi|190561844|gb|EDV15813.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis Tsiankovskii-I]
gi|227004048|gb|ACP13791.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. CDC 684]
gi|229266043|gb|ACQ47680.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus anthracis str. A0248]
Length = 372
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 1 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 38
>gi|163734649|ref|ZP_02142088.1| asparagine synthetase, putative [Roseobacter litoralis Och 149]
gi|161392142|gb|EDQ16472.1| asparagine synthetase, putative [Roseobacter litoralis Och 149]
Length = 631
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 15 FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS A + V+T+SF YG + + + +P G
Sbjct: 248 LSGGLDSSALAGLAAKQSGAPVQTVSFVYGADKAYDETRYIDAANETFGSIPHKIAIAGA 307
Query: 74 DHILPLAIL 82
+ LA +
Sbjct: 308 PPLDDLATV 316
>gi|71274570|ref|ZP_00650858.1| PP-loop [Xylella fastidiosa Dixon]
gi|71898109|ref|ZP_00680295.1| PP-loop [Xylella fastidiosa Ann-1]
gi|170730829|ref|YP_001776262.1| C32 tRNA thiolase [Xylella fastidiosa M12]
gi|205830710|sp|B0U453|TTCA_XYLFM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|71164302|gb|EAO14016.1| PP-loop [Xylella fastidiosa Dixon]
gi|71732083|gb|EAO34139.1| PP-loop [Xylella fastidiosa Ann-1]
gi|167965622|gb|ACA12632.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 299
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 59/203 (29%), Gaps = 57/203 (28%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+I+ ++ SGG+DS T L L L + V ++ +
Sbjct: 44 MIEANDKIMVCLSGGKDSYTLLDMLLQ-------------------LRAKAPVPFELTAV 84
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVP-----------GR 111
K H+LP + SS+ + QD T VP R
Sbjct: 85 NLDQKQPGFPKHVLPEYL------SSIGVPYHIIEQDTYSVVTRVVPEGKTLCALCSRMR 138
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGM-------- 162
A G T I +G D + + + A GM
Sbjct: 139 RGAL----YAYAETQGFTKIALGHHRDDMVATF------FMNLFHHAKLSGMPPKLRSDN 188
Query: 163 ESHVTVHTPLMWLKKYETWKLAQ 185
HV + PL ++ + + A
Sbjct: 189 GKHVVIR-PLAYVSETDIIAYAD 210
>gi|308189959|ref|YP_003922890.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma fermentans JER]
gi|319777241|ref|YP_004136892.1| tRNA-specific 2-thiouridylase mnma [Mycoplasma fermentans M64]
gi|307624701|gb|ADN69006.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma fermentans JER]
gi|318038316|gb|ADV34515.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma fermentans M64]
Length = 372
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+L SGG DSS L + VE L
Sbjct: 3 KKKVILGMSGGVDSSVAAYLLLQQGYDVEGL 33
>gi|301168417|emb|CBW28007.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 284
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 22/38 (57%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ + S +LFSGG DS+ + + F+++ ++++
Sbjct: 1 MNPQGESVAILFSGGTDSTLTAALLEESFNKIHLITYN 38
>gi|298292472|ref|YP_003694411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Starkeya novella DSM 506]
gi|296928983|gb|ADH89792.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Starkeya novella DSM 506]
Length = 395
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 13/131 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQ--RNKVELECRLCVRKKIVELM 64
++ SGG DSS + V ++ +D+G+ ++ C + I +
Sbjct: 15 RVVVAMSGGVDSSVVAALYAKAGYDVVGVTLQLYDHGEAMHHRP---GACCAGQDIYDAR 71
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-GRNIIFLVFAATLA 123
+ ++L ++ + A P V R + F T A
Sbjct: 72 TVAEKLGIPHYVLD---YESRFRHAVIERFADAYAAGETPIPCVDCNRTVKFRDLLET-A 127
Query: 124 YRLGITNIVIG 134
LG + G
Sbjct: 128 RDLGADILATG 138
>gi|289192452|ref|YP_003458393.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus sp.
FS406-22]
gi|288938902|gb|ADC69657.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus sp.
FS406-22]
Length = 300
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+I K L+ SGG+D +E + G + E K + E
Sbjct: 43 KMIDKDEKILVAVSGGKDGHAAAWVLKKLGYNIELFHINLGIKGFSEES-----LKAVNE 97
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
L K + L H++ L DI+ ++ K + ++ R
Sbjct: 98 LAEKLEVPL---HVVNL---KDITGKTMEDIRGKKCSICGITKRYLMNR----------F 141
Query: 123 AYRLGITNIVIGVCETD 139
Y G IV G D
Sbjct: 142 GYENGFDVIVTGHNLDD 158
>gi|228910232|ref|ZP_04074050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis IBL 200]
gi|228849396|gb|EEM94232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus thuringiensis IBL 200]
Length = 376
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|15837261|ref|NP_297949.1| cell cycle protein [Xylella fastidiosa 9a5c]
gi|61217426|sp|Q9PFJ8|TILS_XYLFA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|9105537|gb|AAF83469.1|AE003910_5 cell cycle protein [Xylella fastidiosa 9a5c]
Length = 437
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Query: 12 LLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ FSGG DS+ L R +E + +G + C +
Sbjct: 18 LVAFSGGLDSTVLLHCLASQPTQRIHGLEAIHIHHGLHEHADAWTAHCAAFCTQHYIRLH 77
Query: 68 KDSLGEDH 75
+ H
Sbjct: 78 IARVHVSH 85
>gi|65321763|ref|ZP_00394722.1| COG0482: Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Bacillus anthracis str. A2012]
Length = 376
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + + ++ SGG DSS ++ V +
Sbjct: 5 MMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 42
>gi|320449367|ref|YP_004201463.1| argininosuccinate synthase [Thermus scotoductus SA-01]
gi|320149536|gb|ADW20914.1| argininosuccinate synthase [Thermus scotoductus SA-01]
Length = 400
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV-ELMPKW 67
+L +SGG D+S L W + + V + D GQ +VE +R +
Sbjct: 2 KIVLAYSGGLDTSIILKWLKETYKAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDL 61
Query: 68 KDSLGEDHILPLAILGDI 85
++ D + P+ G +
Sbjct: 62 REEFVRDFVFPMFRAGAV 79
>gi|295425130|ref|ZP_06817835.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus amylolyticus DSM 11664]
gi|295065189|gb|EFG56092.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactobacillus amylolyticus DSM 11664]
Length = 375
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS + V +
Sbjct: 4 NKKKRVVVGMSGGVDSSVSALLLKQQGYDVIGV 36
>gi|242399383|ref|YP_002994807.1| Asparagine synthetase [Thermococcus sibiricus MM 739]
gi|242265776|gb|ACS90458.1| Asparagine synthetase [Thermococcus sibiricus MM 739]
Length = 509
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
++ + +LFSGG DSS A V + G +LE V +++ +
Sbjct: 265 LRSSKRVRVLFSGGLDSSLIALLAKKYSKEVILYTA--GAEGSPDLEWARKVSEQLDLTL 322
Query: 65 PKWKDSLGEDHILPLAILGDISH-SSLTKNVAMKI 98
++ L E ++ I +++ + + +
Sbjct: 323 KEYVFDLEEVKEALYPVMFAIEEPNAMNLAIGIPM 357
>gi|170290743|ref|YP_001737559.1| GMP synthase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174823|gb|ACB07876.1| GMP synthase, large subunit [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 504
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 67/193 (34%), Gaps = 35/193 (18%)
Query: 9 PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L SGG DS+ A D+V + ++G K E E L K I + +
Sbjct: 212 KKVLAAVSGGVDSTVSTLLASRVAGDKVVPVFVNHGLLRKGEAESVLSSLKSIG-IDVIY 270
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
D+ E L+ L I + + + IF + ++ R G
Sbjct: 271 VDASEEF----LSSLKGIKDCEKKREIIGE----------------IFARIFSEISEREG 310
Query: 128 ITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
++ G + YPD D I++ L V PL +L K E
Sbjct: 311 CDCLLQG------TLYPDVVESGAEIGADRIKSHHNVAGLPPWFKGRVLEPLRYLYKDEV 364
Query: 181 WKLAQDIGGQDLV 193
KLA+ +G + +
Sbjct: 365 RKLAKYLGIPEEI 377
>gi|91091728|ref|XP_967315.1| PREDICTED: similar to argininosuccinate synthetase [Tribolium
castaneum]
gi|270001069|gb|EEZ97516.1| hypothetical protein TcasGA2_TC011361 [Tribolium castaneum]
Length = 409
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+L +SGG D+S L W LD+ V + GQ + E ++I
Sbjct: 5 KVVLAYSGGLDTSCILRWLLDQNYEVICYMANIGQ--DEDFEAARRKAEQIGA 55
>gi|317488697|ref|ZP_07947236.1| arginosuccinate synthase [Eggerthella sp. 1_3_56FAA]
gi|316912213|gb|EFV33783.1| arginosuccinate synthase [Eggerthella sp. 1_3_56FAA]
Length = 464
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRK 58
A+L +SGG D+S C+ W + + V + D GQ ++ + + K
Sbjct: 12 KDKAVLAYSGGLDTSVCIKWLQEEKNLDVIAVVGDVGQEHEGLEKIKQKALK 63
>gi|262306005|gb|ACY45595.1| gln amidotransferase [Ammothea hilgendorfi]
Length = 197
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG 43
L+L SGG DS+ C + +V + D G
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALQPNQVLAVHIDNG 80
>gi|260427551|ref|ZP_05781530.1| GMP synthase [Citreicella sp. SE45]
gi|260422043|gb|EEX15294.1| GMP synthase [Citreicella sp. SE45]
Length = 523
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 62/193 (32%), Gaps = 35/193 (18%)
Query: 9 PSALLLFSGGQDSST---CLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ SGG DSS L A+ D++ + D+G RL +++V +
Sbjct: 226 KKVICALSGGVDSSVTGILLHEAI--GDQLTCVFVDHG-------LLRLNEAEQVVSMFR 276
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
+ LG + S + I +F+ A +
Sbjct: 277 DNYNLNLIHADESDLFLGALEGVSDPETKRKTIGK-------------LFIDVFQKYADQ 323
Query: 126 L-GITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
+ G + G D +SG P TI++ L + + + PL L K
Sbjct: 324 IEGAEFLAQGTLYPDVIESVSFSGGP---SVTIKSHHNVGGLPEKMGLKLVEPLRELFKD 380
Query: 179 ETWKLAQDIGGQD 191
E L ++G
Sbjct: 381 EVRALGHELGLPA 393
>gi|238894182|ref|YP_002918916.1| tRNA-specific 2-thiouridylase MnmA [Klebsiella pneumoniae
NTUH-K2044]
gi|238546498|dbj|BAH62849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 388
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS L + +V L
Sbjct: 20 SMSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVGGL 55
>gi|158422537|ref|YP_001523829.1| NAD synthetase [Azorhizobium caulinodans ORS 571]
gi|158329426|dbj|BAF86911.1| NAD+ synthase [Azorhizobium caulinodans ORS 571]
Length = 566
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 12 LLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
++L SGG DS+ C + A+D +RV + Y ++ L V +++
Sbjct: 301 VVLGLSGGIDSAICAAMAVDALGPERVHCIMLPYRFTSQDSLSDAADVARRL 352
>gi|320449214|ref|YP_004201310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermus scotoductus SA-01]
gi|320149383|gb|ADW20761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermus scotoductus SA-01]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRV 35
P L+ SGG DSS + V
Sbjct: 2 PKVLVAMSGGVDSSVSAYLLKEAGYEV 28
>gi|295396917|ref|ZP_06807041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Aerococcus viridans ATCC 11563]
gi|294974851|gb|EFG50554.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Aerococcus viridans ATCC 11563]
Length = 378
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + K ++ SGG DSS + V +
Sbjct: 2 VENNPNKNTRVVVGMSGGVDSSVTALLLKQQGYDVIGI 39
>gi|290475827|ref|YP_003468719.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Xenorhabdus bovienii SS-2004]
gi|289175152|emb|CBJ81955.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Xenorhabdus bovienii SS-2004]
Length = 367
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 76/234 (32%), Gaps = 47/234 (20%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS + +V L + + + C +
Sbjct: 4 NSQKKVIVGMSGGVDSSVSAYLLQQQGYKVAGLFMK---NWEEDDDEEYCSAAADLADAQ 60
Query: 66 KWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII---------F 115
D LG + H + + + +A + + PN P I+ F
Sbjct: 61 AVCDKLGIELHTIN--FAAEYWDNVFEHFLA-EYKAGRTPN---PD--ILCNKEIKFKAF 112
Query: 116 LVFAATLAYRLGITNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--- 170
L FA A LG I G V D G I + ++ + ++T
Sbjct: 113 LEFA---AEDLGADYIATGHYVRRRDVDG--------ISQLLRGLDGNKDQSYFLYTLSH 161
Query: 171 --------PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY 216
P+ L+K E +LA++IG + C++G+R R G
Sbjct: 162 QQIAKSLFPVGELEKPEVRRLAEEIGLVTAKKKD--STGICFIGERKFRDFLGR 213
>gi|229180948|ref|ZP_04308283.1| Argininosuccinate synthase [Bacillus cereus 172560W]
gi|228602505|gb|EEK59991.1| Argininosuccinate synthase [Bacillus cereus 172560W]
Length = 411
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K +L +SGG D+S + W ++ + L D G
Sbjct: 12 KKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229198789|ref|ZP_04325485.1| Argininosuccinate synthase [Bacillus cereus m1293]
gi|228584722|gb|EEK42844.1| Argininosuccinate synthase [Bacillus cereus m1293]
Length = 411
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K +L +SGG D+S + W ++ + L D G
Sbjct: 12 KKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|257387449|ref|YP_003177222.1| GMP synthase subunit B [Halomicrobium mukohataei DSM 12286]
gi|257169756|gb|ACV47515.1| GMP synthase, large subunit [Halomicrobium mukohataei DSM 12286]
Length = 305
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
+A++ SGG DSST + A + D++ + D G
Sbjct: 22 ENAVIALSGGVDSSTAAALAYEAIGDQLTPVYVDTG 57
>gi|148358920|ref|YP_001250127.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
[Legionella pneumophila str. Corby]
gi|296106968|ref|YP_003618668.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Legionella pneumophila 2300/99 Alcoy]
gi|205816878|sp|A5IBN1|MNMA_LEGPC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|148280693|gb|ABQ54781.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
[Legionella pneumophila str. Corby]
gi|295648869|gb|ADG24716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Legionella pneumophila 2300/99 Alcoy]
Length = 361
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ +VE L
Sbjct: 1 MKAKVIVGMSGGVDSSVAAWLLKEQGYQVEGL 32
>gi|52841619|ref|YP_095418.1| tRNA-specific 2-thiouridylase MnmA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|81603374|sp|Q5ZVQ1|MNMA_LEGPH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|52628730|gb|AAU27471.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|307610092|emb|CBW99633.1| hypothetical protein LPW_14011 [Legionella pneumophila 130b]
Length = 361
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ +VE L
Sbjct: 1 MKAKVIVGMSGGVDSSVAAWLLKEQGYQVEGL 32
>gi|83591106|ref|YP_431115.1| argininosuccinate synthase [Moorella thermoacetica ATCC 39073]
gi|119361293|sp|Q2RG67|ASSY_MOOTA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|83574020|gb|ABC20572.1| argininosuccinate synthase [Moorella thermoacetica ATCC 39073]
Length = 408
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE 49
M + A +L +SGG D+S + W + + V ++ D GQ ++E
Sbjct: 1 MKGVFTVAEKVVLAYSGGLDTSIIIPWLKETYGYEVIAVAVDVGQGEELE 50
>gi|72080763|ref|YP_287821.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma hyopneumoniae
7448]
gi|123644877|sp|Q4A7U1|MNMA_MYCH7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|71913887|gb|AAZ53798.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Mycoplasma hyopneumoniae 7448]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ V +
Sbjct: 3 KIVVGLSGGVDSAVSAYLLKKAGHNVIAV 31
>gi|71893779|ref|YP_279225.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma hyopneumoniae J]
gi|123645587|sp|Q4A9Q7|MNMA_MYCHJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205822182|sp|Q600M2|MNMA_MYCH2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|71851906|gb|AAZ44514.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Mycoplasma hyopneumoniae J]
gi|312601389|gb|ADQ90644.1| tRNA-specific 2-thiouridylase mnmA [Mycoplasma hyopneumoniae 168]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ V +
Sbjct: 3 KIVVGLSGGVDSAVSAYLLKKAGHNVIAV 31
>gi|54020202|ref|YP_115943.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma hyopneumoniae 232]
gi|53987375|gb|AAV27576.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Mycoplasma hyopneumoniae 232]
Length = 387
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ V +
Sbjct: 18 KIVVGLSGGVDSAVSAYLLKKAGHNVIAV 46
>gi|61657492|emb|CAI44404.1| hypothetical protein [Thermotoga sp. KOL6]
Length = 304
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 18/139 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ KK L+ SGG+DS + V+ L G + + +K E+
Sbjct: 43 MFKKDSKILIAVSGGKDSVSLWHILKKLGYDVDALFIRAG---------KSAMVQKAQEI 93
Query: 64 MPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ K + L H++ D S+ ++ ++ ++ R +
Sbjct: 94 VEKNAEILNTKLHVVDATQYFD-GLSTQEISIILRRPVCSICGVV---RRYLM----NKF 145
Query: 123 AYRLGITNIVIGVCETDYS 141
AY G +V G D +
Sbjct: 146 AYENGYDVVVTGHNLNDEA 164
>gi|54297299|ref|YP_123668.1| tRNA-specific 2-thiouridylase MnmA [Legionella pneumophila str.
Paris]
gi|81601865|sp|Q5X5H6|MNMA_LEGPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|53751084|emb|CAH12495.1| hypothetical protein lpp1344 [Legionella pneumophila str. Paris]
Length = 361
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ +VE L
Sbjct: 1 MKAKVIVGMSGGVDSSVAAWLLKEQGYQVEGL 32
>gi|326561328|gb|EGE11686.1| NAD+ synthetase [Moraxella catarrhalis 7169]
Length = 563
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D DRV + Y ++ LE ++
Sbjct: 303 KGVIVGLSGGIDSALTLCIAVDALGSDRVYAVMMPYEYTAQISLEDAEAQAARL 356
>gi|296328692|ref|ZP_06871209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
gi|296154291|gb|EFG95092.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 362
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DSST + + ++
Sbjct: 28 VAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|256845062|ref|ZP_05550520.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2]
gi|256718621|gb|EEU32176.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2]
Length = 362
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DSST + + ++
Sbjct: 28 VAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|237741734|ref|ZP_04572215.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 4_1_13]
gi|294785652|ref|ZP_06750940.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_27]
gi|229429382|gb|EEO39594.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 4_1_13]
gi|294487366|gb|EFG34728.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium sp. 3_1_27]
Length = 362
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DSST + + ++
Sbjct: 28 VAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|254173555|ref|ZP_04880227.1| N-type ATP pyrophosphatase superfamily protein [Thermococcus sp.
AM4]
gi|214032247|gb|EEB73077.1| N-type ATP pyrophosphatase superfamily protein [Thermococcus sp.
AM4]
Length = 263
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ L+LFSGG+DSS L + V L+F
Sbjct: 21 RDRKILMLFSGGKDSSLALYLLKEAKLNVSALTF 54
>gi|254303789|ref|ZP_04971147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148323981|gb|EDK89231.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 362
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DSST + + ++
Sbjct: 28 VAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|46198590|ref|YP_004257.1| asparagine synthetase [glutamine-hydrolyzing] [Thermus thermophilus
HB27]
gi|46196212|gb|AAS80630.1| asparagine synthetase [Thermus thermophilus HB27]
Length = 575
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 12/117 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-------ELM 64
++ SGG DS T ++F YG+ E E V ++ +
Sbjct: 206 VIPLSGGWDSRTIALALKKVGYEP-LIAFSYGKPKNAEAEVSRDVASQLGIPWLFAEYSL 264
Query: 65 PKWKDSLGEDHILPLAILGDISHS--SLTKNVAMKIQDNNLPN--TFVPGRNIIFLV 117
W+++ G ++ + +A+ + + +P+ VPG + FL
Sbjct: 265 STWREAAQSSWFTEYLWFGHNGYAVPHIQDLLAIHLLKSQIPSDAVVVPGHSGDFLA 321
>gi|19704100|ref|NP_603662.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|81479855|sp|Q8R5X3|MNMA1_FUSNN RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
gi|19714304|gb|AAL94961.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 362
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DSST + + ++
Sbjct: 28 VAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|189500273|ref|YP_001959743.1| argininosuccinate synthase [Chlorobium phaeobacteroides BS1]
gi|229889860|sp|B3EJ62|ASSY_CHLPB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|189495714|gb|ACE04262.1| Argininosuccinate synthase [Chlorobium phaeobacteroides BS1]
Length = 402
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
+K+ AL SGG D+S + W D++D + ++ + GQ ++E
Sbjct: 1 MKREKIALAY-SGGLDTSVMIKWLKDKYDADIIAVTGNLGQEKEIE 45
>gi|34763143|ref|ZP_00144111.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27887172|gb|EAA24275.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 362
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DSST + + ++
Sbjct: 28 VAMSGGVDSSTVAYLLKQQGYDIFGVT 54
>gi|291572176|dbj|BAI94448.1| putative asparagine synthetase [Arthrospira platensis NIES-39]
Length = 567
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 16/99 (16%)
Query: 14 LFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
SGG DSS + A +V T S +G ELE V +
Sbjct: 239 YLSGGLDSSAITALASQFHQHQVHTYSIHFGAEYPNELEFANLVAEHCQ----------T 288
Query: 73 EDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPG 110
+ HIL + + ++T N+ I D P T VP
Sbjct: 289 QHHILEIKPESVWDNLAITMANLDDPIGD---PLT-VPN 323
>gi|288556459|ref|YP_003428394.1| hypothetical protein BpOF4_17305 [Bacillus pseudofirmus OF4]
gi|288547619|gb|ADC51502.1| hypothetical protein BpOF4_17305 [Bacillus pseudofirmus OF4]
Length = 231
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 31/187 (16%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+LF+GG+DSS + V L+ + G K EL ++ EL ++
Sbjct: 3 KEKVAVLFTGGRDSSLVACLEALQGKEVHLLTCNSGIGIKSELSE-----VRVEELKKRF 57
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL-------VFAA 120
+++ ILP L +++A+ + + V N++ L A
Sbjct: 58 PENIVGRTILPTYGLF--------RSIAISNLEEDFKRWGV---NLVLLGDKLAIHAAAT 106
Query: 121 TLAYRLGITNIVIGVCE--TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
GIT +V G D + D + + + E E +T P+
Sbjct: 107 VYCIENGITRLVDGCVGYQKDLAEQKDVSIEILSSFEK------EYGITYECPIYHFGSQ 160
Query: 179 ETWKLAQ 185
+ K A
Sbjct: 161 DDVKYAL 167
>gi|288553719|ref|YP_003425654.1| argininosuccinate synthase [Bacillus pseudofirmus OF4]
gi|288544879|gb|ADC48762.1| argininosuccinate synthase [Bacillus pseudofirmus OF4]
Length = 403
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+L +SGG D+S + W D+ V + D G
Sbjct: 3 KKKVVLAYSGGLDTSVAIKWLSDKGYDVIAVGLDVG 38
>gi|284054585|ref|ZP_06384795.1| asparagine synthase [Arthrospira platensis str. Paraca]
Length = 567
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 16/99 (16%)
Query: 14 LFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
SGG DSS + A +V T S +G ELE V +
Sbjct: 239 YLSGGLDSSAITALASQFHQHQVHTYSIHFGAEYPNELEFANLVAEHCQ----------T 288
Query: 73 EDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPG 110
+ HIL + + ++T N+ I D P T VP
Sbjct: 289 QHHILEIKPESVWDNLAITMANLDDPIGD---PLT-VPN 323
>gi|260890636|ref|ZP_05901899.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
hofstadii F0254]
gi|260859681|gb|EEX74181.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
hofstadii F0254]
Length = 396
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L SGG DS R R+ ++F + + + +K+ EL
Sbjct: 185 KGLVLLSGGIDSPVASFMMAKRGMRLNFITF-----HSFPFTSQQAL-EKVKELTDILSL 238
Query: 70 SLGEDHILPLAILG 83
+G+ + L IL
Sbjct: 239 YVGKTRLYSLNILK 252
>gi|257792080|ref|YP_003182686.1| argininosuccinate synthase [Eggerthella lenta DSM 2243]
gi|325831706|ref|ZP_08164923.1| argininosuccinate synthase [Eggerthella sp. HGA1]
gi|257475977|gb|ACV56297.1| argininosuccinate synthase [Eggerthella lenta DSM 2243]
gi|325486577|gb|EGC89026.1| argininosuccinate synthase [Eggerthella sp. HGA1]
Length = 464
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRK 58
A+L +SGG D+S C+ W + + V + D GQ ++ + + K
Sbjct: 12 KDKAVLAYSGGLDTSVCIKWLQEEKNLDVIAVVGDVGQEHEGLEKIKQKALK 63
>gi|225175850|ref|ZP_03729843.1| ExsB family protein [Dethiobacter alkaliphilus AHT 1]
gi|225168774|gb|EEG77575.1| ExsB family protein [Dethiobacter alkaliphilus AHT 1]
Length = 266
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 65/200 (32%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
I+++ S L+ FSGG DSS L+ A D+V ++ + +
Sbjct: 14 ILEEMGSVLVAFSGGVDSSVLLAMASGTLGDKVLAVT---------------AASETYLS 58
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-------------TFVP 109
+ + L +PL ++ T+ +A+ +N P T V
Sbjct: 59 EEQEVAERLAAKLQVPLQVI-------ETEELAIPAFQDNPPERCYYCKHELFGKLTEV- 110
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
A G+ + G D D R ++ A LG V
Sbjct: 111 -------------AKANGLQYVADGSNADDVG---DWRPG----MKAAAELG------VR 144
Query: 170 TPL--MWLKKYETWKLAQDI 187
+PL K + +LA+++
Sbjct: 145 SPLKEAGFTKEDVRRLAREL 164
>gi|167037462|ref|YP_001665040.1| tRNA-specific 2-thiouridylase MnmA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300914208|ref|ZP_07131524.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X561]
gi|307724557|ref|YP_003904308.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X513]
gi|320115876|ref|YP_004186035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|205810696|sp|B0K991|MNMA2_THEP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|205815314|sp|B0K0P8|MNMA2_THEPX RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|166856296|gb|ABY94704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|300889143|gb|EFK84289.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X561]
gi|307581618|gb|ADN55017.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X513]
gi|319928967|gb|ADV79652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 364
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVE 62
++ + SGG DSS + V L+ ++ + + C K +
Sbjct: 1 MEINNRVAIGMSGGVDSSVAAYLLKKQGFDVIGLTMRVWVDHEAKAFDSDKSCCSLKATQ 60
Query: 63 LMPKWKDSLGEDH-ILPLAIL 82
K + LG H + L+ +
Sbjct: 61 DAKKVAEILGIPHYTVDLSKI 81
>gi|167040124|ref|YP_001663109.1| tRNA-specific 2-thiouridylase MnmA [Thermoanaerobacter sp. X514]
gi|166854364|gb|ABY92773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter sp. X514]
Length = 387
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVE 62
++ + SGG DSS + V L+ ++ + + C K +
Sbjct: 24 MEINNRVAIGMSGGVDSSVAAYLLKKQGFDVIGLTMRVWVDHEAKAFDSDKSCCSLKATQ 83
Query: 63 LMPKWKDSLGEDH-ILPLAIL 82
K + LG H + L+ +
Sbjct: 84 DAKKVAEILGIPHYTVDLSKI 104
>gi|15606458|ref|NP_213838.1| hypothetical protein aq_1224 [Aquifex aeolicus VF5]
gi|6226257|sp|O67274|MNMA_AQUAE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|2983672|gb|AAC07238.1| hypothetical protein aq_1224 [Aquifex aeolicus VF5]
Length = 356
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 4/93 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMPKWKDSLG 72
SGG DSS ++ V ++ + E+ C K V+ + LG
Sbjct: 7 MSGGVDSSVTALLLKEQGHDVIRVTLRFHTVEACEVNETHNVCCSPKDVQDASRVAKRLG 66
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
H++ +I S + + + PN
Sbjct: 67 IPHLVF--SWEEIFKSKVIDYFVEEYKRGRTPN 97
>gi|325968586|ref|YP_004244778.1| phosphoadenosine phosphosulfate reductase [Vulcanisaeta moutnovskia
768-28]
gi|323707789|gb|ADY01276.1| phosphoadenosine phosphosulfate reductase [Vulcanisaeta moutnovskia
768-28]
Length = 300
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 10/43 (23%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRV----------ETLSFD 41
++++SGG+DS+ L A DRV + FD
Sbjct: 64 KKVVVVWSGGKDSTVVLHLAKTVADRVGKAFDVVFIDHYMHFD 106
>gi|322703533|gb|EFY95140.1| argininosuccinate synthase [Metarhizium anisopliae ARSEF 23]
Length = 371
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+ L +SGG D+ST L W L + +V D GQ + + K + +
Sbjct: 6 VCLAYSGGLDTSTILVWLLQQGYQVVCYLGDVGQ----DEDFAAVEAKALKLGAEAFVCE 61
Query: 71 LGEDHILPLAILGDISHSSLTKN 93
+ ++ + I +++ ++
Sbjct: 62 NLQRELVDDVVSRAIMCNAIFED 84
>gi|300121184|emb|CBK21565.2| unnamed protein product [Blastocystis hominis]
Length = 475
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + K+ + + SGG DSS L + V+ +
Sbjct: 127 VSTVSKRWKTVFVGLSGGIDSSVSAYLLLKQGYDVKGV 164
>gi|317152965|ref|YP_004121013.1| argininosuccinate synthase [Desulfovibrio aespoeensis Aspo-2]
gi|316943216|gb|ADU62267.1| argininosuccinate synthase [Desulfovibrio aespoeensis Aspo-2]
Length = 410
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 22/136 (16%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVE 62
+ K +L +SGG D+S L W + +D V ++ D GQ +++ +E + +
Sbjct: 1 MSKLEKVVLAYSGGLDTSIILKWIKNNYDCDVVCMTADLGQGEEMDGIEQKALTTGAVKA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA--- 119
+ ++ D++ P+ + A+ + A
Sbjct: 61 YVEDLREEFVRDYVFPMFRASALYEGRYLLGTAIARP-----------------LIAKRM 103
Query: 120 ATLAYRLGITNIVIGV 135
+A G + G
Sbjct: 104 VEIAEVEGAQAVAHGA 119
>gi|213964802|ref|ZP_03393001.1| GMP synthase [glutamine-hydrolyzing] [Corynebacterium amycolatum
SK46]
gi|213952338|gb|EEB63721.1| GMP synthase [glutamine-hydrolyzing] [Corynebacterium amycolatum
SK46]
Length = 524
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 4/98 (4%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
+ + + + A+ SGG DS+ + DR+ + D+G + E R V K
Sbjct: 213 VRNQVGETGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRQGE---REQVEKD 269
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
V ++ + + A+ G + K + +
Sbjct: 270 FVAATGAKLITVDDSKVFLDALAGITDPETKRKTIGRE 307
>gi|147920090|ref|YP_686151.1| GMP synthase subunit B [uncultured methanogenic archaeon RC-I]
gi|121690424|sp|Q0W468|GUAAB_UNCMA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|110621547|emb|CAJ36825.1| GMP synthase, glutamine-hydrolyzing [uncultured methanogenic
archaeon RC-I]
Length = 305
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
AL+ SGG DSS C A DR+ + D G
Sbjct: 23 KALIALSGGVDSSVCAILAHRALGDRLIPVYVDTG 57
>gi|110669078|ref|YP_658889.1| GMP synthase subunit B [Haloquadratum walsbyi DSM 16790]
gi|109626825|emb|CAJ53293.1| GMP synthase, subunit B (glutamine-hydrolyzing) [Haloquadratum
walsbyi DSM 16790]
gi|148508177|gb|ABQ75968.1| GMP synthase, subunit B (glutamine-hydrolyzing) [uncultured
haloarchaeon]
Length = 305
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 13/110 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELE------------CRL 54
+A++ SGG DSS + A D++ + D G K E + +
Sbjct: 21 EDNAVIALSGGVDSSVSAALAYKAIGDQLTPVYVDTGLMRKGETKQVKDTFAYMDSLRVV 80
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
+ + E + D + H++ + + + N +Q P
Sbjct: 81 DAQDRFFESLAGVTDPEEKRHVIGEQFIREFEEEAHAANADYLVQGTIYP 130
>gi|83942044|ref|ZP_00954506.1| argininosuccinate synthase [Sulfitobacter sp. EE-36]
gi|83847864|gb|EAP85739.1| argininosuccinate synthase [Sulfitobacter sp. EE-36]
Length = 406
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARAKAEMMGA 57
>gi|83953093|ref|ZP_00961815.1| argininosuccinate synthase [Sulfitobacter sp. NAS-14.1]
gi|83842061|gb|EAP81229.1| argininosuccinate synthase [Sulfitobacter sp. NAS-14.1]
Length = 406
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARAKAEMMGA 57
>gi|94986166|ref|YP_605530.1| argininosuccinate synthase [Deinococcus geothermalis DSM 11300]
gi|119361271|sp|Q1IWM3|ASSY_DEIGD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|94556447|gb|ABF46361.1| Argininosuccinate synthase [Deinococcus geothermalis DSM 11300]
Length = 414
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRK 58
M ++ + ++L +SGG D+S L W +R V T + D GQ ++VE E R+
Sbjct: 1 MANVQQGQKDKIVLAYSGGLDTSIILKWLQTERNYDVVTFTADLGQGDEVE-EARVKALN 59
Query: 59 --KIVELMPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 60 TGAVAAYALDLREEFVRDYVFPM 82
>gi|329925517|ref|ZP_08280391.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. HGF5]
gi|328939800|gb|EGG36140.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. HGF5]
Length = 476
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 41/196 (20%)
Query: 12 LLLFSGGQDSSTCLSWALDRF-----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ SGG DS L + R+ +G R + + E + + EL
Sbjct: 30 VVAVSGGPDSVALLHVLHEISMHRTPLRLICAHVHHGFRRESDQEAEM-----VRELAES 84
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ L I A + + + + FL A +
Sbjct: 85 LRLPLETAFIDIPAYMEESGKGGQEAAREKRYE---------------FL---LQTARKH 126
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL--------GMESHVTVHTPLMWLKKY 178
++ + D + +R + + E V + P + + K
Sbjct: 127 NARSVALAHHADDQA-----ETVFMRLLRGSGLSGLGGIKFKRTEKKVELIRPFLRMYKA 181
Query: 179 ETWKLAQDIGGQDLVN 194
+ +L + G Q V+
Sbjct: 182 DIVELCRVCGFQYAVD 197
>gi|323214164|gb|EFZ98924.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
Length = 230
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|309364979|emb|CAP23621.2| hypothetical protein CBG_03001 [Caenorhabditis briggsae AF16]
Length = 808
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG-QRN 46
L++ SGG DS+ C + RV + D G R+
Sbjct: 338 KKVLVMVSGGVDSAVCAALLNRALGPGRVTAVHIDNGFMRH 378
>gi|283784944|ref|YP_003364809.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Citrobacter rodentium ICC168]
gi|282948398|emb|CBG87986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Citrobacter rodentium ICC168]
Length = 368
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|323524770|ref|YP_004226923.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. CCGE1001]
gi|323381772|gb|ADX53863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. CCGE1001]
Length = 381
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKQKVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|260429185|ref|ZP_05783162.1| argininosuccinate synthase [Citreicella sp. SE45]
gi|260419808|gb|EEX13061.1| argininosuccinate synthase [Citreicella sp. SE45]
Length = 406
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + V T + D GQ ELE + + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAEMLG-V 57
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 58 SKVYIEDLREEFVRD 72
>gi|258651487|ref|YP_003200643.1| GMP synthase large subunit [Nakamurella multipartita DSM 44233]
gi|258554712|gb|ACV77654.1| GMP synthase, large subunit [Nakamurella multipartita DSM 44233]
Length = 523
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 31/195 (15%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ SGG DS+ + D++ + D+G E E ++
Sbjct: 222 TEKVICALSGGVDSAVAAALVHQAVGDQLTCVFVDHGLLRAGERE----------QVERD 271
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-AYR 125
+ + G + A ++ +L + + + F+ R +F AA + A
Sbjct: 272 YVAATGIHLVTVDAEQRFLA--ALDGITEPETKRKIIGREFI--R--VFETAAAEINAAE 325
Query: 126 LGITNIVIGVCETDYSGYPD-------CRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
G+ +V G + YPD TI++ L + + PL L K
Sbjct: 326 GGVKFLVQG------TLYPDVVESGGGTGTATIKSHHNVGGLPDDLQFQLVEPLRALFKD 379
Query: 179 ETWKLAQDIGGQDLV 193
E L ++G +
Sbjct: 380 EVRALGAELGLPAAM 394
>gi|229042997|ref|ZP_04190728.1| Asparagine synthetase [glutamine-hydrolyzing] 3 [Bacillus cereus
AH676]
gi|228726337|gb|EEL77563.1| Asparagine synthetase [glutamine-hydrolyzing] 3 [Bacillus cereus
AH676]
Length = 615
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
Query: 15 FSGGQDSSTCLSWALDRFDR-----VETLSFDY 42
SGG DSST + A ++R + T S DY
Sbjct: 264 LSGGVDSSTITAIAAKEYERSGKGQLHTYSIDY 296
>gi|289803739|ref|ZP_06534368.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 109
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|218885155|ref|YP_002434476.1| argininosuccinate synthase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226729177|sp|B8DN64|ASSY_DESVM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|218756109|gb|ACL07008.1| Argininosuccinate synthase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 401
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQ 44
+ K +L +SGG D+S L W A+ V TL+ D GQ
Sbjct: 1 MAKAIKKVVLAYSGGLDTSVILKWIAVTYGCEVVTLTADLGQ 42
>gi|213850128|ref|ZP_03381026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
M223]
Length = 116
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|213022904|ref|ZP_03337351.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 72
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|205822040|sp|A9MG80|MNMA_SALAR RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 368
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|205814741|sp|A8AHK2|MNMA_CITK8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 368
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|162139594|ref|YP_216172.2| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|71658017|sp|Q57QC0|MNMA_SALCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|322714225|gb|EFZ05796.1| tRNA-specific 2-thiouridylase mnmA [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 368
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|268532154|ref|XP_002631205.1| Hypothetical protein CBG03001 [Caenorhabditis briggsae]
Length = 741
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG-QRN 46
L++ SGG DS+ C + RV + D G R+
Sbjct: 271 KKVLVMVSGGVDSAVCAALLNRALGPGRVTAVHIDNGFMRH 311
>gi|16760109|ref|NP_455726.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142120|ref|NP_805462.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56413780|ref|YP_150855.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|161614531|ref|YP_001588496.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168233116|ref|ZP_02658174.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168244308|ref|ZP_02669240.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|168467196|ref|ZP_02701038.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|168822341|ref|ZP_02834341.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194444280|ref|YP_002040490.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449928|ref|YP_002045236.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194472097|ref|ZP_03078081.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197249278|ref|YP_002146807.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197362703|ref|YP_002142340.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198245672|ref|YP_002215901.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|204930753|ref|ZP_03221626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205353032|ref|YP_002226833.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207857259|ref|YP_002243910.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213428090|ref|ZP_03360840.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213580464|ref|ZP_03362290.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
gi|213612639|ref|ZP_03370465.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213648222|ref|ZP_03378275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|224584258|ref|YP_002638056.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|24638320|sp|Q8Z7G9|MNMA_SALTI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|71658018|sp|Q5PMJ4|MNMA_SALPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205816911|sp|A9N4K8|MNMA_SALPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|25298380|pir||AC0647 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC
2.1.1.61) [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16502403|emb|CAD08358.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29137749|gb|AAO69311.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|56128037|gb|AAV77543.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|161363895|gb|ABX67663.1| hypothetical protein SPAB_02280 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402943|gb|ACF63165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194408232|gb|ACF68451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194458461|gb|EDX47300.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|195630429|gb|EDX49055.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197094180|emb|CAR59684.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|197212981|gb|ACH50378.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197940188|gb|ACH77521.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|204320212|gb|EDZ05416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205272813|emb|CAR37739.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|205332653|gb|EDZ19417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205336786|gb|EDZ23550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|205341217|gb|EDZ27981.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|206709062|emb|CAR33395.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468785|gb|ACN46615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Paratyphi
C strain RKS4594]
gi|322616610|gb|EFY13519.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619875|gb|EFY16749.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622443|gb|EFY19288.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629439|gb|EFY26216.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632935|gb|EFY29678.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636820|gb|EFY33523.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641380|gb|EFY38019.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645145|gb|EFY41674.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652308|gb|EFY48664.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655660|gb|EFY51962.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660965|gb|EFY57195.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322665449|gb|EFY61637.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667574|gb|EFY63735.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322673632|gb|EFY69734.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677558|gb|EFY73622.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322679777|gb|EFY75816.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687250|gb|EFY83222.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323193058|gb|EFZ78280.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199445|gb|EFZ84538.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203633|gb|EFZ88655.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208826|gb|EFZ93764.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323217800|gb|EGA02515.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323218889|gb|EGA03400.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226637|gb|EGA10837.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229603|gb|EGA13726.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232828|gb|EGA16924.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240136|gb|EGA24180.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242877|gb|EGA26898.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246793|gb|EGA30763.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323254307|gb|EGA38124.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255573|gb|EGA39332.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259407|gb|EGA43043.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267003|gb|EGA50488.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272107|gb|EGA55521.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 368
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|39546313|ref|NP_460204.2| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167991976|ref|ZP_02573075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168264253|ref|ZP_02686226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|197263918|ref|ZP_03163992.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|200391023|ref|ZP_03217634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|24638322|sp|Q8ZPZ4|MNMA_SALTY RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|197242173|gb|EDY24793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|199603468|gb|EDZ02014.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205329792|gb|EDZ16556.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205347303|gb|EDZ33934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|267993013|gb|ACY87898.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301157775|emb|CBW17268.1| Probable tRNA [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912222|dbj|BAJ36196.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223852|gb|EFX48915.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
Length = 368
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|330998316|ref|ZP_08322141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paraprevotella xylaniphila YIT 11841]
gi|329568705|gb|EGG50506.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paraprevotella xylaniphila YIT 11841]
Length = 378
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 51/162 (31%), Gaps = 41/162 (25%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF----------DYGQ------RNK 47
+ + L+ SGG DSS D V ++ D GQ ++
Sbjct: 1 MEHERKKVLVGMSGGIDSSAVCLMLQDEGYEVVGVTMRVWDLARQFTDAGQEYPDFIQDA 60
Query: 48 VELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
L RL + + + +KD + D + + G + + N A K
Sbjct: 61 RALAARLGIVHYVADERTAFKDIVVRDFV-DEYLAGRTPNPCVMCNPAFK---------- 109
Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIG----VCETD--YSGY 143
R A +LG I G V E D Y+ Y
Sbjct: 110 --FR------VLVEWADKLGCDYIATGHYVRVKEEDGHYALY 143
>gi|289577867|ref|YP_003476494.1| NAD+ synthetase [Thermoanaerobacter italicus Ab9]
gi|289527580|gb|ADD01932.1| NAD+ synthetase [Thermoanaerobacter italicus Ab9]
Length = 543
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLS 39
A++ SGG DS+ + A++ + V +S
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVFAVS 320
>gi|222445963|ref|ZP_03608478.1| hypothetical protein METSMIALI_01611 [Methanobrevibacter smithii
DSM 2375]
gi|222435528|gb|EEE42693.1| hypothetical protein METSMIALI_01611 [Methanobrevibacter smithii
DSM 2375]
Length = 336
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG------QRNKVELECRL 54
+ + IK A+ FSGG DS+ A D+ ++ D ++ +
Sbjct: 10 VENTIKNRKIAIA-FSGGADSTLLTYLASKVSDKPIAITIDNHIFPTGFIKHCKKTAKEF 68
Query: 55 CVRKKIVELMPKWKDSLGEDH 75
++ K+++L ++L +
Sbjct: 69 GIKHKVIDLNFYEHENLLSNK 89
>gi|221119829|ref|XP_002168506.1| PREDICTED: similar to guanine monphosphate synthetase, partial
[Hydra magnipapillata]
Length = 652
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 1 MNDIIKK--APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
MN+I + + L L SGG DS+ C +RV + D G
Sbjct: 187 MNEIREAVGKNNVLSLVSGGVDSTVCTILLQKAIGVERVIAVHIDNG 233
>gi|189426268|ref|YP_001953445.1| thiamine biosynthesis protein [Geobacter lovleyi SZ]
gi|189422527|gb|ACD96925.1| thiamine biosynthesis protein [Geobacter lovleyi SZ]
Length = 333
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL LFSGG DS + + V ++F
Sbjct: 1 MQRRALALFSGGLDSILAVKVIQQQGIDVLAINF 34
>gi|86750300|ref|YP_486796.1| GMP synthase [Rhodopseudomonas palustris HaA2]
gi|123292405|sp|Q2IV75|GUAA_RHOP2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|86573328|gb|ABD07885.1| GMP synthase (glutamine-hydrolyzing) [Rhodopseudomonas palustris
HaA2]
Length = 540
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 61/197 (30%), Gaps = 43/197 (21%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + D++ + D+G K E K +V+L
Sbjct: 244 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGMLRKDE-------AKTVVDLFRHHY 296
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ LG +S + + I +F+
Sbjct: 297 NIPLVHVDASETFLGALSGVTDPEQKRKIIGK-------------LFI-------DVFDA 336
Query: 129 TNIVIGVCETDY----SGYPDC--RHDT-------IRAIETAINLGMESHVTVHTPLMWL 175
V+G DY + YPD I++ L ++ + PL L
Sbjct: 337 EAKVVG--GADYLAQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLREL 394
Query: 176 KKYETWKLAQDIGGQDL 192
K E L +++G ++
Sbjct: 395 FKDEVRALGRELGLPEI 411
>gi|78357574|ref|YP_389023.1| argininosuccinate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|119361272|sp|Q30YB8|ASSY_DESDG RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|78219979|gb|ABB39328.1| argininosuccinate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 400
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+ K+ +L +SGG D+S L W +D V TL+ D GQ
Sbjct: 1 MGKEIKKVVLAYSGGLDTSVILKWIAKTYDCEVVTLTADLGQ 42
>gi|323442826|gb|EGB00451.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus O46]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGI 35
>gi|283770696|ref|ZP_06343588.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
aureus H19]
gi|283460843|gb|EFC07933.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
aureus H19]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGI 35
>gi|258424047|ref|ZP_05686929.1| tRNA methyl transferase [Staphylococcus aureus A9635]
gi|257845668|gb|EEV69700.1| tRNA methyl transferase [Staphylococcus aureus A9635]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGI 35
>gi|221141109|ref|ZP_03565602.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus str. JKD6009]
Length = 364
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGI 35
>gi|88601435|ref|YP_501613.1| argininosuccinate synthase [Methanospirillum hungatei JF-1]
gi|119361291|sp|Q2FLD8|ASSY_METHJ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|88186897|gb|ABD39894.1| argininosuccinate synthase [Methanospirillum hungatei JF-1]
Length = 395
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ +L +SGG D+S C+ + +DRV T++ D GQR K E+ K+ + K
Sbjct: 5 TVVLAYSGGLDTSICIPLLKEEYGYDRVVTVAADVGQR-KEEISIAEEKGKRFAD---KH 60
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM 96
D + ++ I + L + M
Sbjct: 61 YTLDLIDQFVDRCLMPSIKANGLYEGYPM 89
>gi|82751221|ref|YP_416962.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus RF122]
gi|123547857|sp|Q2YT57|MNMA_STAAB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|82656752|emb|CAI81181.1| 5-methylaminomethyl-2-thiouridylate-methyltransferase tRNA
[Staphylococcus aureus RF122]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGI 35
>gi|21283300|ref|NP_646388.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus MW2]
gi|49486454|ref|YP_043675.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus MSSA476]
gi|297207658|ref|ZP_06924093.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300911740|ref|ZP_07129183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus TCH70]
gi|24638304|sp|Q8NW84|MNMA_STAAW RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|56749706|sp|Q6G8U8|MNMA_STAAS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|21204740|dbj|BAB95436.1| (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Staphylococcus aureus subsp. aureus MW2]
gi|49244897|emb|CAG43358.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|296887675|gb|EFH26573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300885986|gb|EFK81188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus TCH70]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGI 35
>gi|25029100|ref|NP_739154.1| hypothetical protein CE2544 [Corynebacterium efficiens YS-314]
gi|259505902|ref|ZP_05748804.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Corynebacterium
efficiens YS-314]
gi|61216660|sp|Q8FMG0|TILS_COREF RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|23494387|dbj|BAC19354.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166506|gb|EEW51060.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Corynebacterium
efficiens YS-314]
Length = 313
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKK 59
SGG DS ++ A V + ++ Q E+ R + +
Sbjct: 36 LSGGPDSLALVAAARAEGAEVTAICINHNLQEGSAEVSERAAAQAE 81
>gi|15924611|ref|NP_372145.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus Mu50]
gi|156979939|ref|YP_001442198.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus Mu3]
gi|255006407|ref|ZP_05145008.2| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|24638325|sp|Q931Q6|MNMA_STAAM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|166235085|sp|A7X333|MNMA_STAA1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|14247392|dbj|BAB57783.1| tRNA-methyltransferase [Staphylococcus aureus subsp. aureus Mu50]
gi|156722074|dbj|BAF78491.1| 5-methylaminomethyl-2-thiouridylate- methyltransf erase
[Staphylococcus aureus subsp. aureus Mu3]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGI 35
>gi|15920850|ref|NP_376519.1| hypothetical protein ST0630 [Sulfolobus tokodaii str. 7]
gi|15621634|dbj|BAB65628.1| 318aa long hypothetical veg136 protein [Sulfolobus tokodaii str. 7]
Length = 318
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 22/143 (15%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRK 58
+ + + + SGG+DS+T L + + ++ D G ++
Sbjct: 42 KMFENSKKIAVAVSGGKDSTTLLHLMKKLSEKKGFEIIGINIDLG------IDMGKQYSS 95
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT--FVPGRNIIFL 116
K E K + LG + + + I T + A + +T V R +
Sbjct: 96 KSTEFALKNFEMLGVKYRI-VRIKERYG---FTIDDAKHKIKRPVCSTCGLV-KRYTL-- 148
Query: 117 VFAATLAYRLGITNIVIGVCETD 139
+A G IV G D
Sbjct: 149 ---TEIAEEEGADTIVTGHNLND 168
>gi|15927201|ref|NP_374734.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus N315]
gi|49483866|ref|YP_041090.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus MRSA252]
gi|57650503|ref|YP_186516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus COL]
gi|148268102|ref|YP_001247045.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus JH9]
gi|150394170|ref|YP_001316845.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus JH1]
gi|151221735|ref|YP_001332557.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509848|ref|YP_001575507.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253316605|ref|ZP_04839818.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253732278|ref|ZP_04866443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253733127|ref|ZP_04867292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus TCH130]
gi|257425746|ref|ZP_05602170.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428406|ref|ZP_05604804.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431044|ref|ZP_05607423.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433730|ref|ZP_05610088.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
aureus E1410]
gi|257436645|ref|ZP_05612689.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
M876]
gi|257793696|ref|ZP_05642675.1| tRNA methyl transferase [Staphylococcus aureus A9781]
gi|258411005|ref|ZP_05681285.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus A9763]
gi|258420193|ref|ZP_05683148.1| tRNA methyl transferase [Staphylococcus aureus A9719]
gi|258438195|ref|ZP_05689479.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A9299]
gi|258443658|ref|ZP_05691997.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A8115]
gi|258446865|ref|ZP_05695019.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A6300]
gi|258448779|ref|ZP_05696891.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus A6224]
gi|258450551|ref|ZP_05698613.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A5948]
gi|258453598|ref|ZP_05701576.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A5937]
gi|262048616|ref|ZP_06021499.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
[Staphylococcus aureus D30]
gi|269203247|ref|YP_003282516.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus ED98]
gi|282893124|ref|ZP_06301358.1| tRNA methyl transferase [Staphylococcus aureus A8117]
gi|282904202|ref|ZP_06312090.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus C160]
gi|282906028|ref|ZP_06313883.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908941|ref|ZP_06316759.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911258|ref|ZP_06319060.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914426|ref|ZP_06322212.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus M899]
gi|282916890|ref|ZP_06324648.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
D139]
gi|282919396|ref|ZP_06327131.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
C427]
gi|282920169|ref|ZP_06327894.1| tRNA methyl transferase [Staphylococcus aureus A9765]
gi|282924721|ref|ZP_06332389.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
C101]
gi|282928255|ref|ZP_06335860.1| tRNA methyl transferase [Staphylococcus aureus A10102]
gi|283958382|ref|ZP_06375833.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|284024678|ref|ZP_06379076.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus 132]
gi|293503501|ref|ZP_06667348.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510518|ref|ZP_06669224.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
M809]
gi|293531058|ref|ZP_06671740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus M1015]
gi|294848651|ref|ZP_06789397.1| tRNA methyl transferase [Staphylococcus aureus A9754]
gi|295406743|ref|ZP_06816548.1| tRNA methyl transferase [Staphylococcus aureus A8819]
gi|295428198|ref|ZP_06820830.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275907|ref|ZP_06858414.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus MR1]
gi|297245675|ref|ZP_06929540.1| tRNA methyl transferase [Staphylococcus aureus A8796]
gi|297590835|ref|ZP_06949473.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus MN8]
gi|304380782|ref|ZP_07363449.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|24638330|sp|Q99TM8|MNMA_STAAN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|56749735|sp|Q6GG82|MNMA_STAAR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|71153356|sp|Q5HFE1|MNMA_STAAC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|172048920|sp|A6QHG3|MNMA_STAAE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|189040510|sp|A6U290|MNMA_STAA2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|189040511|sp|A5ITE6|MNMA_STAA9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|189040512|sp|A8Z4F9|MNMA_STAAT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205829108|sp|Q2FGA5|MNMA_STAA3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205829109|sp|Q2FXV6|MNMA_STAA8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|13701419|dbj|BAB42713.1| (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Staphylococcus aureus subsp. aureus N315]
gi|49241995|emb|CAG40692.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|57284689|gb|AAW36783.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus COL]
gi|147741171|gb|ABQ49469.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus JH9]
gi|149946622|gb|ABR52558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus JH1]
gi|150374535|dbj|BAF67795.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Staphylococcus aureus subsp. aureus str. Newman]
gi|160368657|gb|ABX29628.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253724067|gb|EES92796.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253728883|gb|EES97612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus TCH130]
gi|257271440|gb|EEV03586.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275247|gb|EEV06734.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278247|gb|EEV08889.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281823|gb|EEV11960.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
aureus E1410]
gi|257283996|gb|EEV14119.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
M876]
gi|257787668|gb|EEV26008.1| tRNA methyl transferase [Staphylococcus aureus A9781]
gi|257840155|gb|EEV64619.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus A9763]
gi|257843904|gb|EEV68298.1| tRNA methyl transferase [Staphylococcus aureus A9719]
gi|257848239|gb|EEV72230.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A9299]
gi|257851064|gb|EEV75007.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A8115]
gi|257854440|gb|EEV77389.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A6300]
gi|257858057|gb|EEV80946.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus A6224]
gi|257861709|gb|EEV84508.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A5948]
gi|257864329|gb|EEV87079.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A5937]
gi|259163263|gb|EEW47822.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
[Staphylococcus aureus D30]
gi|262075537|gb|ACY11510.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
aureus ED98]
gi|269941107|emb|CBI49493.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TW20]
gi|282313556|gb|EFB43951.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
C101]
gi|282317206|gb|EFB47580.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
C427]
gi|282319377|gb|EFB49729.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
D139]
gi|282321607|gb|EFB51932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus M899]
gi|282324953|gb|EFB55263.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327205|gb|EFB57500.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331320|gb|EFB60834.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590062|gb|EFB95144.1| tRNA methyl transferase [Staphylococcus aureus A10102]
gi|282594517|gb|EFB99502.1| tRNA methyl transferase [Staphylococcus aureus A9765]
gi|282595820|gb|EFC00784.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus C160]
gi|282764442|gb|EFC04568.1| tRNA methyl transferase [Staphylococcus aureus A8117]
gi|283470898|emb|CAQ50109.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus ST398]
gi|283790531|gb|EFC29348.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285817303|gb|ADC37790.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus 04-02981]
gi|290920326|gb|EFD97392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus M1015]
gi|291095167|gb|EFE25432.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466882|gb|EFF09402.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
M809]
gi|294824677|gb|EFG41100.1| tRNA methyl transferase [Staphylococcus aureus A9754]
gi|294968490|gb|EFG44514.1| tRNA methyl transferase [Staphylococcus aureus A8819]
gi|295128556|gb|EFG58190.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297177326|gb|EFH36578.1| tRNA methyl transferase [Staphylococcus aureus A8796]
gi|297575721|gb|EFH94437.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus MN8]
gi|302333295|gb|ADL23488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302751450|gb|ADL65627.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304340658|gb|EFM06591.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|312437911|gb|ADQ76982.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus TCH60]
gi|312830008|emb|CBX34850.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129903|gb|EFT85893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus CGS03]
gi|315195521|gb|EFU25908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus CGS00]
gi|315198681|gb|EFU29009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus CGS01]
gi|320140492|gb|EFW32346.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320144031|gb|EFW35800.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus MRSA177]
gi|323439031|gb|EGA96763.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus O11]
gi|329314296|gb|AEB88709.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
aureus T0131]
gi|329727166|gb|EGG63622.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus 21172]
gi|329728421|gb|EGG64858.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus 21189]
Length = 372
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGI 35
>gi|260590123|ref|ZP_05856036.1| argininosuccinate synthase [Blautia hansenii DSM 20583]
gi|260539635|gb|EEX20204.1| argininosuccinate synthase [Blautia hansenii DSM 20583]
Length = 423
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + F V + GQ ++++ LE R + +
Sbjct: 16 MKEKVILAYSGGLDTTALIPWLKENFDYEVICCCINCGQGSELDGLEERAALSGASKLYI 75
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +D+I+P G + + +M
Sbjct: 76 EDIVDEFCDDYIVPCVQAGAVYENKYLLGTSMA 108
>gi|114793688|pdb|2DER|A Chain A, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma
And Trna-Glu In The Initial Trna Binding State
gi|114793689|pdb|2DER|B Chain B, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma
And Trna-Glu In The Initial Trna Binding State
gi|114793692|pdb|2DET|A Chain A, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma
And Trna-Glu In The Pre-Reaction State
gi|114793694|pdb|2DEU|A Chain A, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma
And Trna-Glu In The Adenylated Intermediate State
gi|114793695|pdb|2DEU|B Chain B, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma
And Trna-Glu In The Adenylated Intermediate State
Length = 380
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 12 SMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 47
>gi|9105431|gb|AAF83379.1|AE003903_15 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 312
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 59/203 (29%), Gaps = 57/203 (28%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+I+ ++ SGG+DS T L L L + V ++ +
Sbjct: 57 MIEANDKIMVCLSGGKDSYTLLDMLLQ-------------------LRAKAPVPFELTAV 97
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVP-----------GR 111
K H+LP + SS+ + QD T VP R
Sbjct: 98 NLDQKQPGFPKHVLPEYL------SSIGMPHHIIEQDTYSVVTRVVPEGKTLCALCSRMR 151
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDY-SGYPDCRHDTIRAIETAINLGM-------- 162
A G T I +G D + + + A GM
Sbjct: 152 RGAL----YAYAETQGFTKIALGHHRDDMVATF------FMNLFHHAKLSGMPPKLRSDN 201
Query: 163 ESHVTVHTPLMWLKKYETWKLAQ 185
HV + PL ++ + + A
Sbjct: 202 GKHVVIR-PLAYVSETDIIAYAD 223
>gi|300814306|ref|ZP_07094578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511573|gb|EFK38801.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 351
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K +L SGG DSS ++ V +
Sbjct: 2 KNKKVVLGMSGGVDSSVAAILLKNQGYDVIGV 33
>gi|293567622|ref|ZP_06678966.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1071]
gi|291589723|gb|EFF21527.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
faecium E1071]
Length = 403
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS +++ R +E + F +K +L K
Sbjct: 179 KGMLMLSGGIDSPVAGYFSMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKLAP 232
Query: 70 SLGEDHILPLAI 81
+G H + +
Sbjct: 233 YVGTIHFIEVPF 244
>gi|282881825|ref|ZP_06290478.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus lacrimalis 315-B]
gi|281298317|gb|EFA90760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus lacrimalis 315-B]
Length = 351
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K +L SGG DSS ++ V +
Sbjct: 2 KNKKVVLGMSGGVDSSVAAILLKNQGYDVIGV 33
>gi|297544156|ref|YP_003676458.1| NAD+ synthetase [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|296841931|gb|ADH60447.1| NAD+ synthetase [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 543
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE---LECRLCVRKKIVELMP 65
A++ SGG DS+ + A++ + L+ R E + R+ +E
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKSDARILAENLGIEFRV 347
Query: 66 KWKDSLGEDHI 76
+ + E ++
Sbjct: 348 IPIEPVFESYL 358
>gi|189485565|ref|YP_001956506.1| argininosuccinate synthase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|226729230|sp|B1H0L3|ASSY_UNCTG RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|170287524|dbj|BAG14045.1| argininosuccinate synthase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 413
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
++ +SGG D+S LSW + + V D GQ ELE KK
Sbjct: 17 KKVVVAYSGGLDTSIILSWVKENYGCEVVACCVDVGQ--GKELEGLDEKAKK 66
>gi|188585091|ref|YP_001916636.1| GMP synthase (glutamine-hydrolyzing) [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|226739645|sp|B2A5V5|GUAA_NATTJ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|179349778|gb|ACB84048.1| GMP synthase (glutamine-hydrolyzing) [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 510
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
+ A+ SGG DS+ D + + ++G
Sbjct: 214 QGRKAVCGLSGGIDSTVAALLVQKAIGDDLTCIFVNHG 251
>gi|13638101|sp|O52831|GUAA_CORAM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|6705971|dbj|BAA89456.1| GMP synthetase [Corynebacterium ammoniagenes]
Length = 524
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 26/192 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ SGG DS+ + DR+ + D+G L + + +
Sbjct: 222 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGEREQVEKDFVASTG 275
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
L H A L ++ + + I + + R A L
Sbjct: 276 AKLITAHEAD-AFLSKLAGVTDPEAKRKAIGAEFIRSFE---R-----AVAQALEESPED 326
Query: 129 TNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ + V T YPD I++ L + + PL L K E
Sbjct: 327 STVDFLVQGT---LYPDVVESGGGDGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEVR 383
Query: 182 KLAQDIGGQDLV 193
+ +++G + +
Sbjct: 384 AVGRELGLPEEI 395
>gi|213514834|ref|NP_001134536.1| Argininosuccinate synthase [Salmo salar]
gi|209734100|gb|ACI67919.1| Argininosuccinate synthase [Salmo salar]
Length = 412
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ ++L +SGG D+S L W + V T + GQ + + + + +
Sbjct: 1 MSKGTVVLAYSGGLDTSCILVWLKEEGYDVITYLANIGQ--EEDFDAAKKKAESLGA 55
>gi|251795808|ref|YP_003010539.1| PP-loop domain protein [Paenibacillus sp. JDR-2]
gi|247543434|gb|ACT00453.1| PP-loop domain protein [Paenibacillus sp. JDR-2]
Length = 267
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFD---YGQRNKVELECRLC 55
+ DI+++ S ++ FSGG DS+ L A++ V ++ D Y ELE
Sbjct: 9 LQDILREMGSVVVAFSGGVDSTFLLKAAVETLGTGNVLAVTADSETYP---TSELEEAKK 65
Query: 56 VRKKI 60
+ K+I
Sbjct: 66 LAKQI 70
>gi|118781795|ref|XP_311863.3| AGAP003015-PA [Anopheles gambiae str. PEST]
gi|189030949|sp|Q7PR38|ASSY_ANOGA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|116129261|gb|EAA07894.4| AGAP003015-PA [Anopheles gambiae str. PEST]
Length = 424
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
LL +SGG D+S L W L++ V D GQ + KI
Sbjct: 2 SKEKVLLAYSGGLDTSCILKWLLEQDYEVICFMADVGQ--TEDFAAAREKALKIGAADVV 59
Query: 67 WKD 69
KD
Sbjct: 60 VKD 62
>gi|20093296|ref|NP_619371.1| GMP synthase subunit B [Methanosarcina acetivorans C2A]
gi|44887900|sp|Q8THK3|GUAAB_METAC RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|19918653|gb|AAM07851.1| GMP synthase (glutamine-hydrolyzing) [Methanosarcina acetivorans
C2A]
Length = 305
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYG 43
K A++ SGG DSS C A DR++ + D G
Sbjct: 20 KEGKAIIALSGGVDSSVCAELAYRAIGDRLQPIYIDTG 57
>gi|260061668|ref|YP_003194748.1| argininosuccinate synthase [Robiginitalea biformata HTCC2501]
gi|88785800|gb|EAR16969.1| argininosuccinate synthase [Robiginitalea biformata HTCC2501]
Length = 394
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYG 43
+L +SGG D+S C V ++ + G
Sbjct: 2 KKLVLAYSGGLDTSYCAHMLSHKEGYEVHAVTVNTG 37
>gi|319790392|ref|YP_004152025.1| protein of unknown function DUF814 [Thermovibrio ammonificans
HB-1]
gi|317114894|gb|ADU97384.1| protein of unknown function DUF814 [Thermovibrio ammonificans
HB-1]
Length = 329
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ A LLFSGG DS D +V +
Sbjct: 2 EKKEAYLLFSGGLDSVIAAKLLQDMGFKVVGVHI 35
>gi|313679249|ref|YP_004056988.1| nh(3)-dependent nad(+) synthetase [Oceanithermus profundus DSM
14977]
gi|313151964|gb|ADR35815.1| NH(3)-dependent NAD(+) synthetase [Oceanithermus profundus DSM
14977]
Length = 283
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLS 39
A++ SGG DSS L+ A + V LS
Sbjct: 39 KAVVAASGGVDSSVTLALAARALGPENVHALS 70
>gi|308274580|emb|CBX31179.1| hypothetical protein N47_E46910 [uncultured Desulfobacterium sp.]
Length = 343
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
K AL L SGG DS + VE ++F
Sbjct: 17 KKVRALGLCSGGLDSILAALILRKQQIEVEWITF 50
>gi|297538819|ref|YP_003674588.1| tRNA(Ile)-lysidine synthetase [Methylotenera sp. 301]
gi|297258166|gb|ADI30011.1| tRNA(Ile)-lysidine synthetase [Methylotenera sp. 301]
Length = 456
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF----DRVETLSFDYG 43
+K LL SGG DS+ L + + +G
Sbjct: 34 LKPNQHVLLALSGGLDSTVLLHLLAAAKQTIRFELHAMHVHHG 76
>gi|284161173|ref|YP_003399796.1| ExsB family protein [Archaeoglobus profundus DSM 5631]
gi|284011170|gb|ADB57123.1| ExsB family protein [Archaeoglobus profundus DSM 5631]
Length = 259
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 59/178 (33%), Gaps = 36/178 (20%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+++FSGG DS T D RV ++ + K VE +
Sbjct: 20 VVMFSGGVDSVTLTKLCKDVIKRVFAVTV-----------VSEVLSKYDVEYAKSVAKEI 68
Query: 72 GEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
G DH IL + +L D + +N + + A +G+
Sbjct: 69 GVDHYILEIDLLNDENFVRNDENRCYFCKKK-------------MIRMVKEFASAVGVEC 115
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
IV G ++ + Y R + G+ S + + K E +A+ +G
Sbjct: 116 IVEGTNVSELNEY---RPGY----RAVVEEGVYSPWI----EVGIDKEEIRSIAKKLG 162
>gi|255088800|ref|XP_002506322.1| predicted protein [Micromonas sp. RCC299]
gi|226521594|gb|ACO67580.1| predicted protein [Micromonas sp. RCC299]
Length = 459
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
+L +SGG D+S L W D + V T + D GQ ELE +++ +
Sbjct: 59 KKVVLAYSGGLDTSIILKWLQDTYGCEVITFTADLGQ--GEELEPARAKAEQMGVKQIYI 116
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D++ P+ I + ++
Sbjct: 117 DDLREEFVRDYVFPMFRANAIYEGTYLLGTSIA 149
>gi|241205251|ref|YP_002976347.1| argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859141|gb|ACS56808.1| argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 403
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 16/133 (12%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S L W + + V T + D GQ ++E + ++
Sbjct: 1 MTKIEKIVLSYSGGLDTSIILKWLQETYGCEVVTFTADLGQGEELEPARANAEMVGVKDI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ ++ D + P+ + ++ + +
Sbjct: 61 RIVDLREEFVSDFVFPMLRANALYEGQYLLGSSIARP--------------LIAKHLVGI 106
Query: 123 AYRLGITNIVIGV 135
A +G + G
Sbjct: 107 AREVGADAVAHGA 119
>gi|153808320|ref|ZP_01960988.1| hypothetical protein BACCAC_02613 [Bacteroides caccae ATCC 43185]
gi|149129223|gb|EDM20439.1| hypothetical protein BACCAC_02613 [Bacteroides caccae ATCC 43185]
Length = 435
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L D + + ++G
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDNLVCVHVNHG 176
>gi|119361287|sp|Q11D10|ASSY_MESSB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
Length = 408
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL- 63
K +L +SGG D+S L W V T + D GQ ++E R I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARRKAEMLGIKEIH 64
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ + + ++
Sbjct: 65 IEDLREEFVRDFVFPMFRANALYEGTYLLGTSIA 98
>gi|18311901|ref|NP_558568.1| asparagine synthetase (asnB) [Pyrobaculum aerophilum str. IM2]
gi|18159317|gb|AAL62750.1| asparagine synthetase (asnB) [Pyrobaculum aerophilum str. IM2]
Length = 274
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
+LFSGG DS+ L+ A+ R +
Sbjct: 14 VLFSGGIDSTLVLTAAVKRGLMPLAVHV 41
>gi|15921795|ref|NP_377464.1| argininosuccinate synthase [Sulfolobus tokodaii str. 7]
gi|30172928|sp|Q970V0|ASSY_SULTO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|15622582|dbj|BAB66573.1| 390aa long hypothetical argininosuccinate synthase [Sulfolobus
tokodaii str. 7]
Length = 390
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVR 57
+L +SGG D++ + W + F V T++ D GQ++ E +E R +
Sbjct: 2 KIVLAYSGGLDTTVAIRWLKETFNADVITVTVDVGQKDNFEDIEKRAYIA 51
>gi|110635672|ref|YP_675880.1| argininosuccinate synthase [Mesorhizobium sp. BNC1]
gi|110286656|gb|ABG64715.1| argininosuccinate synthase [Chelativorans sp. BNC1]
Length = 419
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL- 63
K +L +SGG D+S L W V T + D GQ ++E R I E+
Sbjct: 16 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARRKAEMLGIKEIH 75
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ + + ++
Sbjct: 76 IEDLREEFVRDFVFPMFRANALYEGTYLLGTSIA 109
>gi|331084380|ref|ZP_08333484.1| argininosuccinate synthase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330401644|gb|EGG81225.1| argininosuccinate synthase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 408
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + F V + GQ ++++ LE R + +
Sbjct: 1 MKEKVILAYSGGLDTTALIPWLKENFDYEVICCCINCGQGSELDGLEERAALSGASKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +D+I+P G + + +M
Sbjct: 61 EDIVDEFCDDYIVPCVQAGAVYENKYLLGTSMA 93
>gi|326391022|ref|ZP_08212571.1| NAD+ synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325992967|gb|EGD51410.1| NAD+ synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 543
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
A++ SGG DS+ + A++ + L+ R E
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSE 328
>gi|325294366|ref|YP_004280880.1| hypothetical protein Dester_0164 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064814|gb|ADY72821.1| protein of unknown function DUF814 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 327
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 12/34 (35%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ LLFSGG DS D V +
Sbjct: 2 ERKKVYLLFSGGLDSIIAAKLLKDLGFEVIGVHI 35
>gi|307265807|ref|ZP_07547358.1| NAD+ synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919202|gb|EFN49425.1| NAD+ synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 543
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
A++ SGG DS+ + A++ + L+ R E
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSE 328
>gi|77747703|ref|NP_779766.2| hypothetical protein PD1573 [Xylella fastidiosa Temecula1]
gi|182682182|ref|YP_001830342.1| C32 tRNA thiolase [Xylella fastidiosa M23]
gi|205830660|sp|B2I7H1|TTCA_XYLF2 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830734|sp|Q87B85|TTCA_XYLFT RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|182632292|gb|ACB93068.1| PP-loop domain protein [Xylella fastidiosa M23]
gi|307578450|gb|ADN62419.1| C32 tRNA thiolase [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 299
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 59/203 (29%), Gaps = 57/203 (28%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+I+ ++ SGG+DS T L L L + V ++ +
Sbjct: 44 MIEANDKIMVCLSGGKDSYTLLDMLLQ-------------------LRAKAPVPFELTAV 84
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVP-----------GR 111
K H+LP + SS+ + QD T VP R
Sbjct: 85 NLDQKQPGFPKHVLPEYL------SSIGVPYHIIEQDTYSVVTRVVPEGKTLCALCSRMR 138
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGM-------- 162
A G T I +G D + + + A GM
Sbjct: 139 RGAL----YAYAETQGFTKIALGHHRDDMVATF------FMNLFHHAKLSGMPPKLRSDN 188
Query: 163 ESHVTVHTPLMWLKKYETWKLAQ 185
HV + PL ++ + + A
Sbjct: 189 GKHVVIR-PLAYVSETDIIAYAD 210
>gi|85714373|ref|ZP_01045361.1| tRNA(Ile)-lysidine synthase [Nitrobacter sp. Nb-311A]
gi|85698820|gb|EAQ36689.1| tRNA(Ile)-lysidine synthase [Nitrobacter sp. Nb-311A]
Length = 337
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALD------RFDRVETLSFDYGQRNKVELECR 53
K AL+L SGG DS + A R + ++ D+G R E R
Sbjct: 16 KGERALVLAVSGGPDSMALMWLAARWRSAMTRGPDLIAVTVDHGLRRGSAREAR 69
>gi|167038045|ref|YP_001665623.1| NAD+ synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040910|ref|YP_001663895.1| NAD+ synthetase [Thermoanaerobacter sp. X514]
gi|300914946|ref|ZP_07132262.1| NAD+ synthetase [Thermoanaerobacter sp. X561]
gi|307723820|ref|YP_003903571.1| NAD+ synthetase [Thermoanaerobacter sp. X513]
gi|320116454|ref|YP_004186613.1| NAD+ synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166855150|gb|ABY93559.1| NAD+ synthetase [Thermoanaerobacter sp. X514]
gi|166856879|gb|ABY95287.1| NAD+ synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|300889881|gb|EFK85027.1| NAD+ synthetase [Thermoanaerobacter sp. X561]
gi|307580881|gb|ADN54280.1| NAD+ synthetase [Thermoanaerobacter sp. X513]
gi|319929545|gb|ADV80230.1| NAD+ synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 543
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
A++ SGG DS+ + A++ + L+ R E
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSE 328
>gi|319936290|ref|ZP_08010708.1| GMP synthase domain-containing protein [Coprobacillus sp. 29_1]
gi|319808666|gb|EFW05210.1| GMP synthase domain-containing protein [Coprobacillus sp. 29_1]
Length = 433
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + + ++ + ++G
Sbjct: 139 KKVLLALSGGVDSSVVAALLVKAIGKQLYCVHVNHG 174
>gi|313887530|ref|ZP_07821213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846408|gb|EFR33786.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 353
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+++ +L SGG DSS + V + RN E + R+ ++++
Sbjct: 1 MQEKKKVILGMSGGVDSSVSAILLKEAGYDVTAVFM----RNWAEDDGMCTAREDYIDVV 56
>gi|255031056|emb|CAX65792.1| polyene carboxamide synthase [Streptomyces sp. RGU5.3]
Length = 615
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 13 LLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQ--RNKVELECRLCVRKKIVELMPK 66
+L SGG DSS+ + A ++V + S D+ N + R V +
Sbjct: 260 VLLSGGLDSSSLTALAARELAAQGEKVRSFSVDFEGLADNFRPDDMRATPDSPFVHDVAD 319
Query: 67 WKDSLGEDHILPLAILGDI 85
SL ED +LP L D+
Sbjct: 320 HVGSLHEDIVLPHTALTDL 338
>gi|206901533|ref|YP_002251489.1| argininosuccinate synthase [Dictyoglomus thermophilum H-6-12]
gi|254807520|sp|B5YAL9|ASSY_DICT6 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|206740636|gb|ACI19694.1| argininosuccinate synthase [Dictyoglomus thermophilum H-6-12]
Length = 397
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
K +L +SGG D+S + W + ++ V TL+ D GQ
Sbjct: 2 KKEKVVLAYSGGLDTSVAIKWLMQKYSLDVITLTVDIGQ 40
>gi|195152121|ref|XP_002016985.1| GL22056 [Drosophila persimilis]
gi|194112042|gb|EDW34085.1| GL22056 [Drosophila persimilis]
Length = 419
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMPK 66
+ +L +SGG D+S L W LD+ V + D GQ+ E + K++ + K
Sbjct: 5 TVILAYSGGLDTSCILKWLLDQQYNVICVLADVGQKEDFVAAEKKALNIGANKVIVVDAK 64
Query: 67 WKDSLGEDHILPLAILGDI 85
S ED+I P +G I
Sbjct: 65 --QSFVEDYIWPAIQMGLI 81
>gi|297618684|ref|YP_003706789.1| Queuosine synthesis-like protein [Methanococcus voltae A3]
gi|297377661|gb|ADI35816.1| Queuosine synthesis-like protein [Methanococcus voltae A3]
Length = 250
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
+ ++ +SGG DS+ A + ++ D G +K L+ K
Sbjct: 14 RGKKVIVSYSGGVDSTLVAKLA-QNGEDCVAVTIDNGFFSKSSLKYAEKKAK 64
>gi|71281561|ref|YP_269601.1| tRNA-specific 2-thiouridylase MnmA [Colwellia psychrerythraea
34H]
gi|123632113|sp|Q480B8|MNMA_COLP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|71147301|gb|AAZ27774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Colwellia psychrerythraea 34H]
Length = 375
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
N + ++ SGG DSS ++ +VE L
Sbjct: 6 NTKAPEQTKVIVGMSGGVDSSVSAYLLKEQGYQVEGL 42
>gi|28057567|gb|AAO29415.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
Length = 312
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 59/203 (29%), Gaps = 57/203 (28%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+I+ ++ SGG+DS T L L L + V ++ +
Sbjct: 57 MIEANDKIMVCLSGGKDSYTLLDMLLQ-------------------LRAKAPVPFELTAV 97
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVP-----------GR 111
K H+LP + SS+ + QD T VP R
Sbjct: 98 NLDQKQPGFPKHVLPEYL------SSIGVPYHIIEQDTYSVVTRVVPEGKTLCALCSRMR 151
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGM-------- 162
A G T I +G D + + + A GM
Sbjct: 152 RGAL----YAYAETQGFTKIALGHHRDDMVATF------FMNLFHHAKLSGMPPKLRSDN 201
Query: 163 ESHVTVHTPLMWLKKYETWKLAQ 185
HV + PL ++ + + A
Sbjct: 202 GKHVVIR-PLAYVSETDIIAYAD 223
>gi|70607352|ref|YP_256222.1| argininosuccinate synthase [Sulfolobus acidocaldarius DSM 639]
gi|76364088|sp|Q4J8F1|ASSY_SULAC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|68568000|gb|AAY80929.1| arginosuccinate synthase [Sulfolobus acidocaldarius DSM 639]
Length = 391
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
+L +SGG D++ + W + F V T++ D GQ++ ++E R + I
Sbjct: 2 KIVLAYSGGLDTTVAIRWLRETFNADVTTVTVDVGQKDDFYQIEKRAYIAGAIKHYTIDA 61
Query: 68 KDSLGEDHI 76
K E +I
Sbjct: 62 KKDFAERYI 70
>gi|165923972|ref|ZP_02219804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coxiella burnetii RSA 334]
gi|165916580|gb|EDR35184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coxiella burnetii RSA 334]
Length = 362
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS ++ V L Q + + + C ++ + D +G
Sbjct: 14 LSGGVDSSVAALVLKEKGYEVIGLFM---QNWETDSKDPFCTAEQDLSDAKAIADHIGIP 70
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ +H P+ + R I F A +LG T++ G
Sbjct: 71 LYVVNFSKAYWNHVFQHCLDEFAQGRTPNPDVWC-NREIKFKSL-LEHAKKLGATHLATG 128
>gi|126730086|ref|ZP_01745898.1| argininosuccinate synthase [Sagittula stellata E-37]
gi|126709466|gb|EBA08520.1| argininosuccinate synthase [Sagittula stellata E-37]
Length = 412
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 6 MNAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAELL 60
>gi|308812868|ref|XP_003083741.1| COG0137: Argininosuccinate synthase (ISS) [Ostreococcus tauri]
gi|116055622|emb|CAL58290.1| COG0137: Argininosuccinate synthase (ISS) [Ostreococcus tauri]
Length = 451
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
+L +SGG D+S L W D + V T + D GQ ++E + + E+
Sbjct: 53 KKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAQQMGVKEIFIDD 112
Query: 67 WKDSLGEDHILPL 79
++ D++ P+
Sbjct: 113 LREEFVRDYVFPM 125
>gi|70726299|ref|YP_253213.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus haemolyticus
JCSC1435]
gi|123660380|sp|Q4L6W8|MNMA_STAHJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|68447023|dbj|BAE04607.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Staphylococcus haemolyticus JCSC1435]
Length = 370
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS D+ V +
Sbjct: 1 MSNKDIRVVVGMSGGVDSSVTAHVLKDQGYDVIGI 35
>gi|22299799|ref|NP_683046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermosynechococcus elongatus BP-1]
gi|30173409|sp|Q8CWM0|MNMA_THEEB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|22295983|dbj|BAC09808.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Thermosynechococcus elongatus BP-1]
Length = 369
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 34/143 (23%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKI 60
+ P+ ++ SGG DSS ++ + V L+ GQ C + +
Sbjct: 1 MSDLPAVVVGLSGGVDSSVAIASLKAQGHPVVGLTLWLMKGKGQ----------CCSEGL 50
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP------GRNII 114
V+ + HI+ + + + + N P R
Sbjct: 51 VDAARLCEQLGVPHHIVDSREIFE--------KYIVNYLISGYANGVTPLPCSQCNR--- 99
Query: 115 FLVFAATLAYR---LGITNIVIG 134
+ F LAY LGI I G
Sbjct: 100 LVKFGPMLAYSREQLGIDYIATG 122
>gi|89067439|ref|ZP_01154952.1| argininosuccinate synthase [Oceanicola granulosus HTCC2516]
gi|89047008|gb|EAR53062.1| argininosuccinate synthase [Oceanicola granulosus HTCC2516]
Length = 406
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MPAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAEMMGAS 58
Query: 64 MPKWKD 69
+D
Sbjct: 59 SIHIED 64
>gi|325107944|ref|YP_004269012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Planctomyces brasiliensis DSM 5305]
gi|324968212|gb|ADY58990.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Planctomyces brasiliensis DSM 5305]
Length = 370
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
A +L SGG DSS ++ V L
Sbjct: 1 MAERVVLAMSGGVDSSAAAHLLQEQGYEVIGL 32
>gi|312898012|ref|ZP_07757421.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Megasphaera micronuciformis F0359]
gi|310620937|gb|EFQ04488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Megasphaera micronuciformis F0359]
Length = 358
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 37/132 (28%), Gaps = 19/132 (14%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRKKIVELMPKWKD 69
+ SGG DSS ++ V ++ KVE C V D
Sbjct: 7 VAMSGGVDSSVTAGLLKEQGYEVIGITLRLWEEEPACKVERNIHACCSLDSVNDAKAVAD 66
Query: 70 SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATL-- 122
LG H L D+ + PN P R F+ F
Sbjct: 67 VLGIRHYTLD---FRDVFRHDVIDYFIDSYAHGKTPN---PCIACNR---FIKFGLLWDQ 117
Query: 123 AYRLGITNIVIG 134
A + G + G
Sbjct: 118 AQQFGADLLATG 129
>gi|114762215|ref|ZP_01441683.1| argininosuccinate synthase [Pelagibaca bermudensis HTCC2601]
gi|114545239|gb|EAU48242.1| argininosuccinate synthase [Roseovarius sp. HTCC2601]
Length = 406
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + V T + D GQ ELE + + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAEMLG-V 57
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 58 SEVYIEDLREEFVRD 72
>gi|77747507|ref|NP_297859.2| C32 tRNA thiolase [Xylella fastidiosa 9a5c]
gi|205830738|sp|Q9PFT8|TTCA_XYLFA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
Length = 299
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 59/203 (29%), Gaps = 57/203 (28%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+I+ ++ SGG+DS T L L L + V ++ +
Sbjct: 44 MIEANDKIMVCLSGGKDSYTLLDMLLQ-------------------LRAKAPVPFELTAV 84
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVP-----------GR 111
K H+LP + SS+ + QD T VP R
Sbjct: 85 NLDQKQPGFPKHVLPEYL------SSIGMPHHIIEQDTYSVVTRVVPEGKTLCALCSRMR 138
Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGM-------- 162
A G T I +G D + + + A GM
Sbjct: 139 RGAL----YAYAETQGFTKIALGHHRDDMVATF------FMNLFHHAKLSGMPPKLRSDN 188
Query: 163 ESHVTVHTPLMWLKKYETWKLAQ 185
HV + PL ++ + + A
Sbjct: 189 GKHVVIR-PLAYVSETDIIAYAD 210
>gi|284929056|ref|YP_003421578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[cyanobacterium UCYN-A]
gi|284809515|gb|ADB95220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[cyanobacterium UCYN-A]
Length = 352
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + D+ V L+
Sbjct: 3 KIVVGLSGGVDSSVAAASLCDQGYEVSGLT 32
>gi|259418011|ref|ZP_05741930.1| argininosuccinate synthase [Silicibacter sp. TrichCH4B]
gi|259346917|gb|EEW58731.1| argininosuccinate synthase [Silicibacter sp. TrichCH4B]
Length = 407
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAELL 55
>gi|87199217|ref|YP_496474.1| argininosuccinate synthase [Novosphingobium aromaticivorans DSM
12444]
gi|119361300|sp|Q2G933|ASSY_NOVAD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|87134898|gb|ABD25640.1| argininosuccinate synthase [Novosphingobium aromaticivorans DSM
12444]
Length = 404
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK 58
+ +L +SGG D+S L W + V T + D GQ ELE K
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLQVTYNCEVVTFTADLGQ--GEELEPARAKAK 53
>gi|81428404|ref|YP_395404.1| hypothetical protein LSA0790 [Lactobacillus sakei subsp. sakei
23K]
gi|61396667|gb|AAX46037.1| Lsa790 [Lactobacillus sakei]
gi|78610046|emb|CAI55094.1| Hypothetical protein, ATP utilizing enzyme PP-loop family
[Lactobacillus sakei subsp. sakei 23K]
Length = 278
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI-V 61
+++ ++ FSGG DS+ L AL+ + V + + E + + ++
Sbjct: 15 LQQMKKVIVAFSGGIDSTLVLKMALETLGKENVLAVVANSELFTDEEFNKAIDLAHEMGA 74
Query: 62 ELMPKWKDSLGEDHI 76
+ + L ++HI
Sbjct: 75 NVEATTLNYLSDEHI 89
>gi|56694946|ref|YP_165291.1| argininosuccinate synthase [Ruegeria pomeroyi DSS-3]
gi|61211384|sp|Q5LWG3|ASSY_SILPO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|56676683|gb|AAV93349.1| argininosuccinate synthase [Ruegeria pomeroyi DSS-3]
Length = 409
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAELL 55
>gi|84500752|ref|ZP_00999001.1| argininosuccinate synthase [Oceanicola batsensis HTCC2597]
gi|84391705|gb|EAQ04037.1| argininosuccinate synthase [Oceanicola batsensis HTCC2597]
Length = 407
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAELL 55
>gi|99082723|ref|YP_614877.1| argininosuccinate synthase [Ruegeria sp. TM1040]
gi|119361324|sp|Q1GCK1|ASSY_SILST RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|99039003|gb|ABF65615.1| argininosuccinate synthase [Ruegeria sp. TM1040]
Length = 407
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAELL 55
>gi|169630797|ref|YP_001704446.1| GMP synthase [glutamine-hydrolyzing] [Mycobacterium abscessus ATCC
19977]
gi|169242764|emb|CAM63792.1| GMP synthase [glutamine-hydrolyzing] [Mycobacterium abscessus]
Length = 526
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE 51
AL SGG DS+ + DR+ + D+ G+R +VE +
Sbjct: 222 RALCALSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRSGERAQVEHD 269
>gi|332662257|ref|YP_004445045.1| RecQ family ATP-dependent DNA helicase [Haliscomenobacter hydrossis
DSM 1100]
gi|332331071|gb|AEE48172.1| ATP-dependent DNA helicase, RecQ family [Haliscomenobacter
hydrossis DSM 1100]
Length = 632
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 17/85 (20%)
Query: 163 ESHVTVHTPLMWLKK---YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
+H+ T L +K E K A ++ + H Y G++D C
Sbjct: 506 ANHLHFDTKLYNFRKSRHAERIKKALAYAEENRCR-SQQLLH--YFGEKDAP-----ACG 557
Query: 220 SCPACYLRQK------GWMEFKEKY 238
C C R+K G+ ++K
Sbjct: 558 VCDVCLERKKQDLDNEGFERLRQKI 582
>gi|332523636|ref|ZP_08399888.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus porcinus str. Jelinkova 176]
gi|332314900|gb|EGJ27885.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus porcinus str. Jelinkova 176]
Length = 373
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTD--KSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|298376303|ref|ZP_06986259.1| GMP synthase, C- domain protein [Bacteroides sp. 3_1_19]
gi|298267340|gb|EFI08997.1| GMP synthase, C- domain protein [Bacteroides sp. 3_1_19]
Length = 435
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L D++ + ++G
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHG 176
>gi|283953751|ref|ZP_06371282.1| hypothetical protein C414_000010118 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794792|gb|EFC33530.1| hypothetical protein C414_000010118 [Campylobacter jejuni subsp.
jejuni 414]
Length = 327
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + +V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAMKLITAQGIKVKALNINIG 35
>gi|262383281|ref|ZP_06076417.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262294179|gb|EEY82111.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 435
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L D++ + ++G
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHG 176
>gi|256841570|ref|ZP_05547077.1| GMP synthase domain-containing protein [Parabacteroides sp. D13]
gi|256737413|gb|EEU50740.1| GMP synthase domain-containing protein [Parabacteroides sp. D13]
Length = 435
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L D++ + ++G
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHG 176
>gi|167755465|ref|ZP_02427592.1| hypothetical protein CLORAM_00979 [Clostridium ramosum DSM 1402]
gi|237733693|ref|ZP_04564174.1| argininosuccinate synthase [Mollicutes bacterium D7]
gi|167704404|gb|EDS18983.1| hypothetical protein CLORAM_00979 [Clostridium ramosum DSM 1402]
gi|229383291|gb|EEO33382.1| argininosuccinate synthase [Coprobacillus sp. D7]
Length = 404
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK---VELECRLCVRKKIVE 62
+L +SGG D++ + W + + V D GQ + +E + C K+
Sbjct: 2 MKEKVILAYSGGLDTTAIIPWLKENYDYEVICCCIDVGQAEELNGLEERAKACGATKL-- 59
Query: 63 LMPKWKDSLGEDHILP 78
+ D +D+I+P
Sbjct: 60 YIKNVVDEYVKDYIMP 75
>gi|150008446|ref|YP_001303189.1| putative GMP synthase [Parabacteroides distasonis ATCC 8503]
gi|255014181|ref|ZP_05286307.1| putative GMP synthase [Bacteroides sp. 2_1_7]
gi|301309336|ref|ZP_07215278.1| GMP synthase, C- domain protein [Bacteroides sp. 20_3]
gi|149936870|gb|ABR43567.1| putative GMP synthase [Parabacteroides distasonis ATCC 8503]
gi|300832425|gb|EFK63053.1| GMP synthase, C- domain protein [Bacteroides sp. 20_3]
Length = 435
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L D++ + ++G
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHG 176
>gi|52219052|ref|NP_001004603.1| argininosuccinate synthase [Danio rerio]
gi|82198389|sp|Q66I24|ASSY_DANRE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|51858476|gb|AAH81578.1| Argininosuccinate synthetase 1 [Danio rerio]
gi|158254326|gb|AAI54283.1| Argininosuccinate synthetase 1 [Danio rerio]
Length = 414
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ ++L +SGG D+S L W ++ V + GQ + + +K+
Sbjct: 1 MSKGLVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQ--DEDFDVARKKAEKLGA 55
>gi|333019852|gb|EGK39124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella flexneri K-227]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|312971270|ref|ZP_07785448.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 1827-70]
gi|310336472|gb|EFQ01658.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 1827-70]
Length = 234
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|293414424|ref|ZP_06657073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B185]
gi|291434482|gb|EFF07455.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B185]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|269955513|ref|YP_003325302.1| GMP synthase large subunit [Xylanimonas cellulosilytica DSM 15894]
gi|269304194|gb|ACZ29744.1| GMP synthase, large subunit [Xylanimonas cellulosilytica DSM 15894]
Length = 524
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
+ SGG DS+ + D++ + D+G
Sbjct: 221 RVICALSGGVDSAVAAALVQKAVGDQLTCVHVDHG 255
>gi|170768217|ref|ZP_02902670.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia albertii TW07627]
gi|170122983|gb|EDS91914.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia albertii TW07627]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|161986546|ref|YP_310111.2| tRNA-specific 2-thiouridylase MnmA [Shigella sonnei Ss046]
gi|205829110|sp|Q3Z2Y6|MNMA_SHISS RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|197118002|ref|YP_002138429.1| asparagine synthetase [Geobacter bemidjiensis Bem]
gi|197087362|gb|ACH38633.1| asparagine synthetase [Geobacter bemidjiensis Bem]
Length = 620
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 25/136 (18%)
Query: 13 LLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+L SGG DSS + A ++T + + E V +
Sbjct: 263 VLLSGGLDSSLVVAAAAQASTTPIKTFTVSFPGTRYDEAGYAAIVARHFG---------- 312
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
E H+L + + + + + + D++L F+ R + +
Sbjct: 313 TEHHVLEVPQPSLGTLDAFSPLIDEPLADSSLLPAFMVSR------------LTVQHVKV 360
Query: 132 VIGVCETD--YSGYPD 145
+G D + GY D
Sbjct: 361 ALGGDGGDELFGGYAD 376
>gi|116334419|ref|YP_795946.1| PP family ATPase [Lactobacillus brevis ATCC 367]
gi|116099766|gb|ABJ64915.1| ATP-utilizing enzyme of the PP-loop superfamily [Lactobacillus
brevis ATCC 367]
Length = 278
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 41/205 (20%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK 58
+ + +K ++ FSGG DS+ L ALD D V + + E L
Sbjct: 11 LQNTLKTYNRVVVGFSGGIDSTVVLKEALDVLGRDNVLAVVAN--------SELFLDAEY 62
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
++ + K + L I H++ AMK +F
Sbjct: 63 EMAGQLAKGMGAQVTGIQLDYLANDQIKHNTPESWYAMKQ---------------MFYQA 107
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
+A + ++ G+ D + + R + E+ L K
Sbjct: 108 MTQVATQFNADAVLDGMIMDDNADF---RPG--------LRARDEAGAVSVLQTADLYKR 156
Query: 179 ETWKLAQDIGGQDLVNLILEESHTC 203
E +LAQ +G + + +C
Sbjct: 157 EVRELAQSLGLTNWNKVA-----SC 176
>gi|110805161|ref|YP_688681.1| tRNA-specific 2-thiouridylase MnmA [Shigella flexneri 5 str.
8401]
gi|161485922|ref|NP_707062.2| tRNA-specific 2-thiouridylase MnmA [Shigella flexneri 2a str.
301]
gi|161486505|ref|NP_836851.2| tRNA-specific 2-thiouridylase MnmA [Shigella flexneri 2a str.
2457T]
gi|123342960|sp|Q0T5N9|MNMA_SHIF8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205828969|sp|Q83LF7|MNMA_SHIFL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|110614709|gb|ABF03376.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|313650389|gb|EFS14796.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella flexneri 2a str. 2457T]
gi|332758322|gb|EGJ88645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella flexneri 4343-70]
gi|332761100|gb|EGJ91387.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella flexneri K-671]
gi|332767378|gb|EGJ97572.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella flexneri 2930-71]
gi|333005353|gb|EGK24871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella flexneri K-218]
gi|333019439|gb|EGK38722.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella flexneri K-304]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|28210054|ref|NP_780998.1| hypothetical protein CTC00292 [Clostridium tetani E88]
gi|28202489|gb|AAO34935.1| conserved protein [Clostridium tetani E88]
Length = 326
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
AL + SGG DS D+ V + F + E + + K+I
Sbjct: 3 RALAMISGGLDSILAAKLMKDQGIDVIGVCFK---SHFFNEESAIRMTKQI 50
>gi|54023384|ref|YP_117626.1| sulfate adenylyltransferase subunit 2 [Nocardia farcinica IFM
10152]
gi|54014892|dbj|BAD56262.1| putative sulfate adenylyltransferase subunit 2 [Nocardia
farcinica IFM 10152]
Length = 314
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
++LFSGG+DS+ L AL F
Sbjct: 42 ERPVILFSGGKDSTVLLHVALKAF 65
>gi|114320607|ref|YP_742290.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alkalilimnicola ehrlichii MLHE-1]
gi|122311715|sp|Q0A8N7|MNMA_ALHEH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|114227001|gb|ABI56800.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alkalilimnicola ehrlichii MLHE-1]
Length = 366
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DS+ L+ VE L
Sbjct: 1 MGKTDKVVVGLSGGVDSAVAAMRLLEAGHHVEGL 34
>gi|187730842|ref|YP_001879941.1| tRNA-specific 2-thiouridylase MnmA [Shigella boydii CDC 3083-94]
gi|205816914|sp|B2TZ86|MNMA_SHIB3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|187427834|gb|ACD07108.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella boydii CDC 3083-94]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|333004970|gb|EGK24490.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella flexneri VA-6]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|313672706|ref|YP_004050817.1| argininosuccinate synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939462|gb|ADR18654.1| argininosuccinate synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 410
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKI 60
+L +SGG D+S L W + V D GQR +E + K+
Sbjct: 2 SREKVVLAYSGGLDTSVILKWLDLKGYDVVAYVADLGQRDDFKAIEEKAYKSGAKEF 58
>gi|262306031|gb|ACY45608.1| gln amidotransferase [Daphnia magna]
Length = 193
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSW---ALDRFD---RVETLSFDYGQRNKVELECRLCVR 57
+ + L+L SGG DS+ C + AL + D RV+ + D G K E E +
Sbjct: 40 TVGRDKIVLMLVSGGVDSAVCAALLHKALLQGDDSSRVQAIHIDNGFLRKDESEQVVTSL 99
Query: 58 KKIVELMPKWKDSL 71
+++ + K SL
Sbjct: 100 QQLGLNLRVVKASL 113
>gi|240168262|ref|ZP_04746921.1| asparagine synthetase AsnB [Mycobacterium kansasii ATCC 12478]
Length = 658
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + EL+ + + I
Sbjct: 290 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSELDVAVASAEAIGA 337
>gi|296140467|ref|YP_003647710.1| sulfate adenylyltransferase, small subunit [Tsukamurella
paurometabola DSM 20162]
gi|296028601|gb|ADG79371.1| sulfate adenylyltransferase, small subunit [Tsukamurella
paurometabola DSM 20162]
Length = 308
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
++LFSGG+DS+ L A+ F
Sbjct: 36 ERPVILFSGGKDSTVLLHLAVKAF 59
>gi|212218582|ref|YP_002305369.1| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii CbuK_Q154]
gi|259495827|sp|B6J7H5|MNMA_COXB1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|212012844|gb|ACJ20224.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coxiella burnetii CbuK_Q154]
Length = 371
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS ++ V L Q + + + C ++ + D +G
Sbjct: 23 LSGGVDSSVAALVLKEKGYEVIGLFM---QNWETDSKDPFCTAEQDLSDAKAIADHIGIP 79
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ +H P+ + R I F A +LG T++ G
Sbjct: 80 LYVVNFSKAYWNHVFQHCLDEFAQGRTPNPDVWC-NREIKFKSL-LDHAKKLGATHLATG 137
>gi|209966151|ref|YP_002299066.1| argininosuccinate synthase [Rhodospirillum centenum SW]
gi|226697528|sp|B6IVD0|ASSY_RHOCS RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|209959617|gb|ACJ00254.1| argininosuccinate synthase [Rhodospirillum centenum SW]
Length = 406
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+L +SGG D+S L W + + V T + D GQ ELE + +
Sbjct: 6 KKVVLAYSGGLDTSVILKWLQETYRCEVVTFTADLGQ--GEELEPARAKAQML 56
>gi|209364013|ref|YP_001424605.2| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii Dugway
5J108-111]
gi|207081946|gb|ABS77207.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coxiella burnetii Dugway 5J108-111]
Length = 371
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS ++ V L Q + + + C ++ + D +G
Sbjct: 23 LSGGVDSSVAALVLKEKGYEVIGLFM---QNWETDSKDPFCTAEQDLSDAKAIADHIGIP 79
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ +H P+ + R I F A +LG T++ G
Sbjct: 80 LYVVNFSKAYWNHVFQHCLDEFAQGRTPNPDVWC-NREIKFKSL-LDHAKKLGATHLATG 137
>gi|189468120|ref|ZP_03016905.1| hypothetical protein BACINT_04514 [Bacteroides intestinalis DSM
17393]
gi|189436384|gb|EDV05369.1| hypothetical protein BACINT_04514 [Bacteroides intestinalis DSM
17393]
Length = 435
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L D + + ++G
Sbjct: 140 NRKVLLALSGGVDSSVVAALLLKAIGDNLVCVHVNHG 176
>gi|156088637|ref|XP_001611725.1| tRNA methyl transferase family protein [Babesia bovis]
gi|154798979|gb|EDO08157.1| tRNA methyl transferase family protein [Babesia bovis]
Length = 665
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
L SGG DS+ L R +E
Sbjct: 291 CLVSGGVDSAVALWLLKSRGFDIEAF 316
>gi|83719254|ref|YP_441804.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia thailandensis
E264]
gi|257137971|ref|ZP_05586233.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia thailandensis
E264]
gi|123537507|sp|Q2SZ45|MNMA_BURTA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|83653079|gb|ABC37142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia thailandensis E264]
Length = 386
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVIGL 33
>gi|18978130|ref|NP_579487.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
DSM 3638]
gi|18893931|gb|AAL81882.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
3638]
Length = 319
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 20/142 (14%)
Query: 4 IIKKAPSALLLFSGGQDSSTC---LSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
+IK+ + SGG+DS L+ +F + ++ D E R K
Sbjct: 43 MIKRGEKVGVAVSGGKDSVVLMHILAKLRKKFPFELVAITID---------EGIKGYRDK 93
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLV 117
VE+ K + LG +H + T + ++ ++ V R L
Sbjct: 94 SVEVARKNAELLGVEHHIYRFKDFIGFTLDETVEIMGPREERVGACSYCGVWRR--WLLN 151
Query: 118 FAATLAYRLGITNIVIGVCETD 139
A A LG+ + +G+ D
Sbjct: 152 KA---AEELGVDKLALGLNLDD 170
>gi|319957785|ref|YP_004169048.1| asparagine synthase (glutamine-hydrolyzing) [Nitratifractor
salsuginis DSM 16511]
gi|319420189|gb|ADV47299.1| asparagine synthase (glutamine-hydrolyzing) [Nitratifractor
salsuginis DSM 16511]
Length = 605
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 20/90 (22%)
Query: 13 LLFSGGQDSSTCLSWALDRFD---RVETLSFD----YGQRNKVELECRLCVRKK------ 59
+L SGG DSS + A + + R ++SF Y + + E R +
Sbjct: 253 VLLSGGLDSSLVAALAANHSERPLRAFSVSFSGYDKYDEAHWAEQTVRHLGAEHRVYPFG 312
Query: 60 -------IVELMPKWKDSLGEDHILPLAIL 82
+ L+P + LG+ ++PL L
Sbjct: 313 KREFFETLEALLPLLDEPLGDPAMVPLFFL 342
>gi|319891462|ref|YP_004148337.1| tRNA(Ile)-lysidine synthetase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161158|gb|ADV04701.1| tRNA(Ile)-lysidine synthetase [Staphylococcus pseudintermedius
HKU10-03]
Length = 429
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 54/192 (28%), Gaps = 41/192 (21%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCV 56
M K ++ S G DS L L + ++ L +G R E E
Sbjct: 1 MQQNWKATDHIVVAVSTGIDSMVLLHQLLYDETLTYRQLTCLHVHHGLREASEQEATFIQ 60
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+P + L L+ + S M+ Q +
Sbjct: 61 HYCEQHDIPFYMKR------LDLSDVVAEGRSIQNDAREMRYQ-------WFD------- 100
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI---ETAINLGM-----ESHVTV 168
T+ ++L ++ E D R T +LGM + +
Sbjct: 101 ----TMMHQLDADGLLTAHHEDDQV-----ETIFYRLFTGKSTRSSLGMSTIEARNGYRL 151
Query: 169 HTPLMWLKKYET 180
+ PL+ K+
Sbjct: 152 YRPLLNTSKHVI 163
>gi|307553134|gb|ADN45909.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli ABU 83972]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|306821577|ref|ZP_07455175.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304550322|gb|EFM38315.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 371
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L SGG DSS ++ V + +N + +C K+ + + K
Sbjct: 5 KKKVILGMSGGVDSSVAAVILKEQGYDVTGIFM----KNWDDKNDDMCTAKQDYDDVRKV 60
Query: 68 KDSLGEDH 75
DSLG D+
Sbjct: 61 ADSLGIDY 68
>gi|300703072|ref|YP_003744674.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia solanacearum CFBP2957]
gi|299070735|emb|CBJ42030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia solanacearum CFBP2957]
Length = 370
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 4 KRVVVGMSGGVDSSVTAWLLKQQGYEVVGL 33
>gi|229918430|ref|YP_002887076.1| tRNA-specific 2-thiouridylase MnmA [Exiguobacterium sp. AT1b]
gi|229469859|gb|ACQ71631.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Exiguobacterium sp. AT1b]
Length = 373
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 1 MNDIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN K + ++ SGG DSS ++ V +
Sbjct: 1 MNLRTKAPEETTVVVGMSGGVDSSVTAHVLKEQGYNVIGI 40
>gi|218700344|ref|YP_002407973.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli IAI39]
gi|218704607|ref|YP_002412126.1| tRNA -specific 2-thiouridylase MnmA [Escherichia coli UMN026]
gi|218370330|emb|CAR18133.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli IAI39]
gi|218431704|emb|CAR12586.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli UMN026]
gi|284920959|emb|CBG34022.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 042]
gi|330910947|gb|EGH39457.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli AA86]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|215486387|ref|YP_002328818.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O127:H6 str.
E2348/69]
gi|215264459|emb|CAS08822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O127:H6 str. E2348/69]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|212691950|ref|ZP_03300078.1| hypothetical protein BACDOR_01445 [Bacteroides dorei DSM 17855]
gi|212665342|gb|EEB25914.1| hypothetical protein BACDOR_01445 [Bacteroides dorei DSM 17855]
Length = 471
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 11/94 (11%)
Query: 148 HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW-KLAQDIGGQDLVNLILEESHTCYL- 205
I+ I+ A+ + +++ P K + + QD + ++ +++ S +C
Sbjct: 282 PTFIKRIQEALY-AIGISNSIYNPYRLKSKADMVLECCQDTSKKAILKSLVDLSCSCAKR 340
Query: 206 --------GKRDKRYEWGYGCNSCPACYLRQKGW 231
+ R C C C R+
Sbjct: 341 GHNVFWDKSGIEIRNAKIKHCGMCLPCLYRRVAL 374
>gi|183983236|ref|YP_001851527.1| asparagine synthetase AsnB [Mycobacterium marinum M]
gi|183176562|gb|ACC41672.1| asparagine synthetase AsnB [Mycobacterium marinum M]
Length = 664
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + EL+ + + I
Sbjct: 296 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSELDVAVASAEAIGA 343
>gi|170682526|ref|YP_001744044.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli SMS-3-5]
gi|218549144|ref|YP_002382935.1| tRNA-specific 2-thiouridylase MnmA [Escherichia fergusonii ATCC
35469]
gi|205816880|sp|B1LI10|MNMA_ECOSM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|170520244|gb|ACB18422.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli SMS-3-5]
gi|218356685|emb|CAQ89312.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia fergusonii ATCC 35469]
gi|323967072|gb|EGB62498.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli M863]
gi|323976496|gb|EGB71584.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli TW10509]
gi|324113924|gb|EGC07898.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia fergusonii B253]
gi|325497565|gb|EGC95424.1| orf, hypothetical protein [Escherichia fergusonii ECD227]
gi|327253837|gb|EGE65466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli STEC_7v]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|161984923|ref|YP_408327.2| tRNA-specific 2-thiouridylase MnmA [Shigella boydii Sb227]
gi|205821943|sp|Q31ZK9|MNMA_SHIBS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|332094391|gb|EGI99440.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella boydii 3594-74]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|161950103|ref|YP_403605.2| tRNA-specific 2-thiouridylase MnmA [Shigella dysenteriae Sd197]
gi|309788203|ref|ZP_07682809.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella dysenteriae 1617]
gi|205821961|sp|Q32EZ1|MNMA_SHIDS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|308924055|gb|EFP69556.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella dysenteriae 1617]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|161830166|ref|YP_001597021.1| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii RSA 331]
gi|189040503|sp|A9NDN1|MNMA_COXBR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|161762033|gb|ABX77675.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coxiella burnetii RSA 331]
Length = 362
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS ++ V L Q + + + C ++ + D +G
Sbjct: 14 LSGGVDSSVAALVLKEKGYEVIGLFM---QNWETDSKDPFCTAEQDLSDAKAIADHIGIP 70
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ +H P+ + R I F A +LG T++ G
Sbjct: 71 LYVVNFSKAYWNHVFQHCLDEFAQGRTPNPDVWC-NREIKFKSL-LDHAKKLGATHLATG 128
>gi|38703944|ref|NP_309632.2| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
Sakai]
gi|161367616|ref|NP_287347.2| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7
EDL933]
gi|168749736|ref|ZP_02774758.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4113]
gi|168756472|ref|ZP_02781479.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4401]
gi|168762550|ref|ZP_02787557.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4501]
gi|168771001|ref|ZP_02796008.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4486]
gi|168776054|ref|ZP_02801061.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4196]
gi|168782470|ref|ZP_02807477.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4076]
gi|168787608|ref|ZP_02812615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC869]
gi|168800455|ref|ZP_02825462.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC508]
gi|195938765|ref|ZP_03084147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4024]
gi|208808537|ref|ZP_03250874.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4206]
gi|208814775|ref|ZP_03255954.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4045]
gi|208822542|ref|ZP_03262861.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4042]
gi|209397379|ref|YP_002270050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4115]
gi|217328487|ref|ZP_03444569.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. TW14588]
gi|254792593|ref|YP_003077430.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
TW14359]
gi|261227234|ref|ZP_05941515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. FRIK2000]
gi|261258759|ref|ZP_05951292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. FRIK966]
gi|291282168|ref|YP_003498986.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Escherichia coli O55:H7 str. CB9615]
gi|24638314|sp|Q8X735|MNMA_ECO57 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|187768490|gb|EDU32334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4196]
gi|188016000|gb|EDU54122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4113]
gi|189000055|gb|EDU69041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4076]
gi|189356337|gb|EDU74756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4401]
gi|189360141|gb|EDU78560.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4486]
gi|189367117|gb|EDU85533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4501]
gi|189372405|gb|EDU90821.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC869]
gi|189377259|gb|EDU95675.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC508]
gi|208728338|gb|EDZ77939.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4206]
gi|208731423|gb|EDZ80111.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4045]
gi|208738027|gb|EDZ85710.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4042]
gi|209158779|gb|ACI36212.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. EC4115]
gi|217318914|gb|EEC27340.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. TW14588]
gi|254591993|gb|ACT71354.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli O157:H7 str. TW14359]
gi|290762041|gb|ADD56002.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Escherichia coli O55:H7 str. CB9615]
gi|320187860|gb|EFW62530.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Escherichia coli O157:H7 str. EC1212]
gi|320637601|gb|EFX07401.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
G5101]
gi|320643161|gb|EFX12362.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H- str.
493-89]
gi|320648098|gb|EFX16774.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H- str.
H 2687]
gi|320653931|gb|EFX22005.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659411|gb|EFX26980.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664548|gb|EFX31699.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
LSU-61]
gi|326339412|gb|EGD63224.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
1044]
gi|326341465|gb|EGD65256.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Escherichia coli O157:H7 str. 1125]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|194433661|ref|ZP_03065937.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella dysenteriae 1012]
gi|194418090|gb|EDX34183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella dysenteriae 1012]
gi|320179167|gb|EFW54125.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Shigella boydii ATCC 9905]
gi|332089265|gb|EGI94371.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella boydii 5216-82]
gi|332092905|gb|EGI97973.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Shigella dysenteriae 155-74]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|110641310|ref|YP_669040.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli 536]
gi|191173062|ref|ZP_03034595.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli F11]
gi|218558015|ref|YP_002390928.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli S88]
gi|218689086|ref|YP_002397298.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli ED1a]
gi|306814017|ref|ZP_07448190.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli NC101]
gi|331657197|ref|ZP_08358159.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli TA206]
gi|123344119|sp|Q0TIU0|MNMA_ECOL5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205822319|sp|A1AA27|MNMA_ECOK1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205822366|sp|Q1RD20|MNMA_ECOUT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|110342902|gb|ABG69139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 536]
gi|190906607|gb|EDV66213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli F11]
gi|218364784|emb|CAR02474.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli S88]
gi|218426650|emb|CAR07478.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli ED1a]
gi|294491197|gb|ADE89953.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli IHE3034]
gi|305852654|gb|EFM53102.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli NC101]
gi|307627395|gb|ADN71699.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli UM146]
gi|323187621|gb|EFZ72928.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli RN587/1]
gi|323953180|gb|EGB49046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli H252]
gi|323957959|gb|EGB53671.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli H263]
gi|331055445|gb|EGI27454.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli TA206]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|23016162|ref|ZP_00055921.1| COG0137: Argininosuccinate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 490
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S L W D++ V T + D GQ ++E R R ++ +
Sbjct: 6 KKVVLAYSGGLDTSIILRWLQDQYSCEVVTFTADLGQGEELE-PARAKARLMGIKEENIF 64
Query: 68 KDSLGEDHILP 78
D L E+ +
Sbjct: 65 IDDLREEFVKD 75
>gi|89107979|ref|AP_001759.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli str. K-12 substr. W3110]
gi|90111218|ref|NP_415651.4| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli str. K-12 substr. MG1655]
gi|157156703|ref|YP_001462402.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli E24377A]
gi|157160657|ref|YP_001457975.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli HS]
gi|170020474|ref|YP_001725428.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli ATCC 8739]
gi|170080784|ref|YP_001730104.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli str. K-12 substr. DH10B]
gi|191168327|ref|ZP_03030119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B7A]
gi|193066260|ref|ZP_03047312.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli E22]
gi|193071716|ref|ZP_03052616.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli E110019]
gi|194436948|ref|ZP_03069047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 101-1]
gi|209918390|ref|YP_002292474.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli SE11]
gi|218553711|ref|YP_002386624.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli IAI1]
gi|218694667|ref|YP_002402334.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli 55989]
gi|238900387|ref|YP_002926183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli BW2952]
gi|253773843|ref|YP_003036674.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161240|ref|YP_003044348.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli B str.
REL606]
gi|256018611|ref|ZP_05432476.1| tRNA-specific 2-thiouridylase MnmA [Shigella sp. D9]
gi|256023169|ref|ZP_05437034.1| tRNA-specific 2-thiouridylase MnmA [Escherichia sp. 4_1_40B]
gi|260843449|ref|YP_003221227.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli O103:H2 str. 12009]
gi|260854815|ref|YP_003228706.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli O26:H11 str. 11368]
gi|260867562|ref|YP_003233964.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli O111:H- str. 11128]
gi|293433421|ref|ZP_06661849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B088]
gi|297518453|ref|ZP_06936839.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli OP50]
gi|301029558|ref|ZP_07192636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 196-1]
gi|307137768|ref|ZP_07497124.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli H736]
gi|307310090|ref|ZP_07589740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli W]
gi|331667534|ref|ZP_08368398.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli TA271]
gi|8039808|sp|P25745|MNMA_ECOLI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205816868|sp|A7ZZ88|MNMA_ECOHS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205816869|sp|B1XA43|MNMA_ECODH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205816870|sp|A7ZKS3|MNMA_ECO24 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205816881|sp|B1IUD4|MNMA_ECOLC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|4062697|dbj|BAA35955.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli str. K12 substr. W3110]
gi|87081837|gb|AAC74217.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli str. K-12 substr. MG1655]
gi|157066337|gb|ABV05592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli HS]
gi|157078733|gb|ABV18441.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli E24377A]
gi|169755402|gb|ACA78101.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli ATCC 8739]
gi|169888619|gb|ACB02326.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli str. K-12 substr. DH10B]
gi|190901622|gb|EDV61379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B7A]
gi|192926109|gb|EDV80751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli E22]
gi|192954978|gb|EDV85481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli E110019]
gi|194423931|gb|EDX39919.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 101-1]
gi|209911649|dbj|BAG76723.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli SE11]
gi|218351399|emb|CAU97105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 55989]
gi|218360479|emb|CAQ98033.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli IAI1]
gi|238863704|gb|ACR65702.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli BW2952]
gi|242376935|emb|CAQ31656.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli BL21(DE3)]
gi|253324887|gb|ACT29489.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253973141|gb|ACT38812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B str. REL606]
gi|253977355|gb|ACT43025.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli BL21(DE3)]
gi|257753464|dbj|BAI24966.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli O26:H11 str. 11368]
gi|257758596|dbj|BAI30093.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli O103:H2 str. 12009]
gi|257763918|dbj|BAI35413.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Escherichia coli O111:H- str. 11128]
gi|260449728|gb|ACX40150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli DH1]
gi|291324240|gb|EFE63662.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B088]
gi|299877553|gb|EFI85764.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli MS 196-1]
gi|306909808|gb|EFN40302.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli W]
gi|309701457|emb|CBJ00761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli ETEC H10407]
gi|315060410|gb|ADT74737.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli W]
gi|315616009|gb|EFU96635.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 3431]
gi|320175639|gb|EFW50731.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Shigella dysenteriae CDC 74-1112]
gi|320184390|gb|EFW59201.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Shigella flexneri CDC 796-83]
gi|320201029|gb|EFW75613.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
[Escherichia coli EC4100B]
gi|323153179|gb|EFZ39443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli EPECa14]
gi|323179331|gb|EFZ64901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 1180]
gi|323185683|gb|EFZ71044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 1357]
gi|323379030|gb|ADX51298.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli KO11]
gi|323937873|gb|EGB34137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli E1520]
gi|323942603|gb|EGB38770.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli E482]
gi|323962732|gb|EGB58310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli H489]
gi|323973277|gb|EGB68466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli TA007]
gi|324117296|gb|EGC11203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli E1167]
gi|331065119|gb|EGI37014.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli TA271]
gi|332342735|gb|AEE56069.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
[Escherichia coli UMNK88]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|331682639|ref|ZP_08383258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli H299]
gi|331080270|gb|EGI51449.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli H299]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|289706606|ref|ZP_06502956.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Micrococcus luteus SK58]
gi|289556741|gb|EFD50082.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Micrococcus luteus SK58]
Length = 539
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG---QRNKVELECRLCVRKKIVELM 64
A+ SGG DS+ + DR+ + D+G + E+E L+
Sbjct: 232 KRAICGLSGGVDSAVAAALVQRAIGDRLTCVYVDHGLMREGESAEIEQAFGEAHGGARLV 291
>gi|284007318|emb|CBA72670.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arsenophonus nasoniae]
Length = 364
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +V L
Sbjct: 2 KKVIVGMSGGVDSSVSAYLLKQQGYQVAGL 31
>gi|253996656|ref|YP_003048720.1| tRNA(Ile)-lysidine synthetase [Methylotenera mobilis JLW8]
gi|253983335|gb|ACT48193.1| tRNA(Ile)-lysidine synthetase [Methylotenera mobilis JLW8]
Length = 500
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 4/40 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYG 43
P LL SGG DS+ L + L +G
Sbjct: 76 PPRLLLALSGGLDSAVLLHLLAGLRSSLGFELYALHVHHG 115
>gi|258405487|ref|YP_003198229.1| PP-loop domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257797714|gb|ACV68651.1| PP-loop domain protein [Desulfohalobium retbaense DSM 5692]
Length = 299
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
L+ SGG+DS L D V L D G
Sbjct: 47 EDRILVAVSGGKDSLALLWQLRDLGYNVHGLHVDLG 82
>gi|222032885|emb|CAP75625.1| hypothetical protein LF82_1359 [Escherichia coli LF82]
gi|312945695|gb|ADR26522.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O83:H1 str.
NRG 857C]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|222085029|ref|YP_002543558.1| argininosuccinate synthase protein [Agrobacterium radiobacter
K84]
gi|221722477|gb|ACM25633.1| argininosuccinate synthase protein [Agrobacterium radiobacter
K84]
Length = 407
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+IK +L +SGG D+S L W + + V T + D GQ ++E I +
Sbjct: 1 MIKDIKKIVLSYSGGLDTSIILKWLQETYKCEVVTFTADLGQGEELEPARAKAEMLAIKD 60
Query: 63 L 63
+
Sbjct: 61 I 61
>gi|224010034|ref|XP_002293975.1| tRNA-methyltransferase [Thalassiosira pseudonana CCMP1335]
gi|220970647|gb|EED88984.1| tRNA-methyltransferase [Thalassiosira pseudonana CCMP1335]
Length = 392
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + P+ +L SGG DSS + L + V
Sbjct: 4 SKDTTRKPTVAMLLSGGVDSSVAMHLLLRQNYNVTAF 40
>gi|212212452|ref|YP_002303388.1| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii CbuG_Q212]
gi|215919120|ref|NP_820145.2| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii RSA 493]
gi|259495828|sp|B6IZW5|MNMA_COXB2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|206584005|gb|AAO90659.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coxiella burnetii RSA 493]
gi|212010862|gb|ACJ18243.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coxiella burnetii CbuG_Q212]
Length = 371
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS ++ V L Q + + + C ++ + D +G
Sbjct: 23 LSGGVDSSVAALVLKEKGYEVIGLFM---QNWETDSKDPFCTAEQDLSDAKAIADHIGIP 79
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ +H P+ + R I F A +LG T++ G
Sbjct: 80 LYVVNFSKAYWNHVFQHCLDEFAQGRTPNPDVWC-NREIKFKSL-LDHAKKLGATHLATG 137
>gi|148642613|ref|YP_001273126.1| PP family ATPase [Methanobrevibacter smithii ATCC 35061]
gi|261349566|ref|ZP_05974983.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
gi|148551630|gb|ABQ86758.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii ATCC 35061]
gi|288861524|gb|EFC93822.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
Length = 305
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 22/142 (15%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRK 58
++ K L+ SGG+DS T L + ++ D E R+
Sbjct: 43 KLLDKGDKVLVALSGGKDSVTTLEILNSFRKMNIIDICAVTVD---------EGIDNYRQ 93
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHS-SLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ V++ + LG +H + +++ + + I + F R I +
Sbjct: 94 EGVDIAIRHAKRLGIEHKV-VSLKEEYGITLDEIMQKDNHIGSCSYCGVF---RRTI-IN 148
Query: 118 FAATLAYRLGITNIVIGVCETD 139
A A +G T I G D
Sbjct: 149 KA---AREMGATKIATGHNLDD 167
>gi|153208378|ref|ZP_01946716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coxiella burnetii 'MSU Goat Q177']
gi|120576035|gb|EAX32659.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coxiella burnetii 'MSU Goat Q177']
Length = 362
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS ++ V L Q + + + C ++ + D +G
Sbjct: 14 LSGGVDSSVAALVLKEKGYEVIGLFM---QNWETDSKDPFCTAEQDLSDAKAIADHIGIP 70
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ +H P+ + R I F A +LG T++ G
Sbjct: 71 LYVVNFSKAYWNHVFQHCLDEFAQGRTPNPDVWC-NREIKFKSL-LDHAKKLGATHLATG 128
>gi|81628239|sp|Q820W2|MNMA_COXBU RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 362
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS ++ V L Q + + + C ++ + D +G
Sbjct: 14 LSGGVDSSVAALVLKEKGYEVIGLFM---QNWETDSKDPFCTAEQDLSDAKAIADHIGIP 70
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ +H P+ + R I F A +LG T++ G
Sbjct: 71 LYVVNFSKAYWNHVFQHCLDEFAQGRTPNPDVWC-NREIKFKSL-LDHAKKLGATHLATG 128
>gi|188494195|ref|ZP_03001465.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 53638]
gi|188489394|gb|EDU64497.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 53638]
Length = 368
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|332364140|gb|EGJ41917.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK49]
Length = 373
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|327463811|gb|EGF10127.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK1057]
Length = 373
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|325695737|gb|EGD37636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK150]
Length = 373
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|325689331|gb|EGD31337.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK115]
Length = 373
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|325686453|gb|EGD28482.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK72]
Length = 373
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|324991889|gb|EGC23812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK405]
gi|324996221|gb|EGC28131.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK678]
gi|327458514|gb|EGF04864.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK1]
gi|327471584|gb|EGF17027.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK408]
gi|327490314|gb|EGF22101.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK1058]
Length = 373
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|324989555|gb|EGC21501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK353]
Length = 373
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|322386456|ref|ZP_08060085.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus cristatus ATCC 51100]
gi|321269542|gb|EFX52473.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus cristatus ATCC 51100]
Length = 373
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|297250334|ref|ZP_06864109.2| NAD+ synthetase [Neisseria polysaccharea ATCC 43768]
gi|296839171|gb|EFH23109.1| NAD+ synthetase [Neisseria polysaccharea ATCC 43768]
Length = 273
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 27/185 (14%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ SGG DS+ + A L Q + + R+ I L ++ ++
Sbjct: 37 VVGVSGGIDSAVVSALAARTGRTTLLLDMPIRQHH----DQLERARRHIRNLQGQYA-NV 91
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII-FLVFAATLAYRLGITN 130
+ + A Q +L N R+ + L G+
Sbjct: 92 SAQTVDLTDTFQTFEQTVGVHQTAFDSQPLSLAN----ARSRLRMLTL-YYYGQIHGLLV 146
Query: 131 IVIGVCETDYS-GYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
G D+ G+ + G + V + +P+ L K + ++LA+ +G
Sbjct: 147 TGTGNKIEDFGVGF------FTK-------YG-DGGVDI-SPIADLTKTQVYRLAEALGV 191
Query: 190 QDLVN 194
+ +
Sbjct: 192 DEAIQ 196
>gi|262281666|ref|ZP_06059435.1| tRNA-specific 2-thiouridylase mnmA [Streptococcus sp. 2_1_36FAA]
gi|262262120|gb|EEY80817.1| tRNA-specific 2-thiouridylase mnmA [Streptococcus sp. 2_1_36FAA]
Length = 373
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|304316376|ref|YP_003851521.1| NAD+ synthetase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302777878|gb|ADL68437.1| NAD+ synthetase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 545
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
A++ SGG DS+ + A+ R L R E
Sbjct: 290 KKAVVGLSGGIDSAVTCALAVKALGRENVLGVSMPSRYSSE 330
>gi|225174283|ref|ZP_03728282.1| GMP synthase, large subunit [Dethiobacter alkaliphilus AHT 1]
gi|225170068|gb|EEG78863.1| GMP synthase, large subunit [Dethiobacter alkaliphilus AHT 1]
Length = 435
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + V K ++ +
Sbjct: 141 KKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKNESEAVVEVFKNQLDANLIY 200
Query: 68 KDS 70
D+
Sbjct: 201 VDA 203
>gi|167618733|ref|ZP_02387364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia thailandensis Bt4]
Length = 386
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVIGL 33
>gi|119953460|ref|YP_945669.1| tRNA-specific 2-thiouridylase MnmA [Borrelia turicatae 91E135]
gi|254811445|sp|A1R0A7|MNMA_BORT9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|119862231|gb|AAX17999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Borrelia turicatae 91E135]
Length = 354
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 13 LLFSGGQDSSTCLSWALDRFDR 34
+L SGG DSS L + + +
Sbjct: 5 VLLSGGVDSSVALYIMIQKGYK 26
>gi|149001781|ref|ZP_01826754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP14-BS69]
gi|147760239|gb|EDK67228.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP14-BS69]
Length = 266
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|189036221|sp|A9KE87|MNMA_COXBN RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 362
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS ++ V L Q + + + C ++ + D +G
Sbjct: 14 LSGGVDSSVAALVLKEKGYEVIGLFM---QNWETDSKDPFCTAEQDLSDAKAIADHIGIP 70
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
+ +H P+ + R I F A +LG T++ G
Sbjct: 71 LYVVNFSKAYWNHVFQHCLDEFAQGRTPNPDVWC-NREIKFKSL-LDHAKKLGATHLATG 128
>gi|70726990|ref|YP_253904.1| argininosuccinate synthase [Staphylococcus haemolyticus JCSC1435]
gi|119361329|sp|Q4L4X7|ASSY_STAHJ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|68447714|dbj|BAE05298.1| argininosuccinate synthase [Staphylococcus haemolyticus JCSC1435]
Length = 400
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+L +SGG D+S + W +D+ V + D G
Sbjct: 1 MKEKIVLAYSGGLDTSVAVKWLIDKGYDVVAVCLDVG 37
>gi|56963351|ref|YP_175082.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bacillus clausii KSM-K16]
gi|81366419|sp|Q5WHN4|MNMA_BACSK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|56909594|dbj|BAD64121.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bacillus clausii KSM-K16]
Length = 364
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 5 IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+KK ++ SGG DSS ++ V +
Sbjct: 1 MKKREDTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|118581572|ref|YP_902822.1| argininosuccinate synthase [Pelobacter propionicus DSM 2379]
gi|166221001|sp|A1ATU4|ASSY_PELPD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|118504282|gb|ABL00765.1| argininosuccinate synthase [Pelobacter propionicus DSM 2379]
Length = 408
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
M + +L +SGG D+S L W + + RV S D GQ
Sbjct: 1 MTQQKMDIKNVVLAYSGGLDTSIILKWLKNEYGCRVVAFSADLGQ 45
>gi|296445479|ref|ZP_06887436.1| argininosuccinate synthase [Methylosinus trichosporium OB3b]
gi|296257045|gb|EFH04115.1| argininosuccinate synthase [Methylosinus trichosporium OB3b]
Length = 414
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
M+ K +L +SGG D+S L W + V T + D GQ ELE +
Sbjct: 1 MSRQKKDIKRVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQ--GEELEPARAKAEL 58
Query: 60 I 60
+
Sbjct: 59 L 59
>gi|168215839|ref|ZP_02641464.1| thiamin biosynthesis protein ThiI [Clostridium perfringens NCTC
8239]
gi|182381995|gb|EDT79474.1| thiamin biosynthesis protein ThiI [Clostridium perfringens NCTC
8239]
Length = 326
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS D+ V + F
Sbjct: 3 RALAMVSGGLDSILAAKLIKDQGIEVIGICF 33
>gi|168210139|ref|ZP_02635764.1| thiamin biosynthesis protein ThiI [Clostridium perfringens B str.
ATCC 3626]
gi|170711808|gb|EDT23990.1| thiamin biosynthesis protein ThiI [Clostridium perfringens B str.
ATCC 3626]
Length = 326
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS D+ V + F
Sbjct: 3 RALAMVSGGLDSILAAKLIKDQGIEVIGICF 33
>gi|168205553|ref|ZP_02631558.1| thiamin biosynthesis protein ThiI [Clostridium perfringens E str.
JGS1987]
gi|170662909|gb|EDT15592.1| thiamin biosynthesis protein ThiI [Clostridium perfringens E str.
JGS1987]
Length = 326
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS D+ V + F
Sbjct: 3 RALAMVSGGLDSILAAKLIKDQGIEVIGICF 33
>gi|168213686|ref|ZP_02639311.1| thiamin biosynthesis protein ThiI [Clostridium perfringens CPE
str. F4969]
gi|169344240|ref|ZP_02865222.1| thiamin biosynthesis protein ThiI [Clostridium perfringens C str.
JGS1495]
gi|182626249|ref|ZP_02954006.1| thiamin biosynthesis protein ThiI [Clostridium perfringens D str.
JGS1721]
gi|169297699|gb|EDS79799.1| thiamin biosynthesis protein ThiI [Clostridium perfringens C str.
JGS1495]
gi|170714850|gb|EDT27032.1| thiamin biosynthesis protein ThiI [Clostridium perfringens CPE
str. F4969]
gi|177908428|gb|EDT70966.1| thiamin biosynthesis protein ThiI [Clostridium perfringens D str.
JGS1721]
Length = 326
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS D+ V + F
Sbjct: 3 RALAMVSGGLDSILAAKLIKDQGIEVIGICF 33
>gi|160945133|ref|ZP_02092359.1| hypothetical protein FAEPRAM212_02652 [Faecalibacterium prausnitzii
M21/2]
gi|158442864|gb|EDP19869.1| hypothetical protein FAEPRAM212_02652 [Faecalibacterium prausnitzii
M21/2]
Length = 521
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 10 SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYG--QRNKVELEC 52
L SGG DSS + A ++ + D+G ++N+ E C
Sbjct: 222 KVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKEEVC 267
>gi|147676842|ref|YP_001211057.1| argininosuccinate synthase [Pelotomaculum thermopropionicum SI]
gi|189046396|sp|A5D510|ASSY_PELTS RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|146272939|dbj|BAF58688.1| argininosuccinate synthase [Pelotomaculum thermopropionicum SI]
Length = 401
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
+L +SGG D+S + W + + V +S D GQ
Sbjct: 3 KVVLAYSGGLDTSVAIPWLKENYGYEVIAMSADLGQ 38
>gi|110799347|ref|YP_696888.1| thiamin biosynthesis protein ThiI [Clostridium perfringens ATCC
13124]
gi|110673994|gb|ABG82981.1| thiamin biosynthesis protein ThiI [Clostridium perfringens ATCC
13124]
Length = 326
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS D+ V + F
Sbjct: 3 RALAMVSGGLDSILAAKLIKDQGIEVIGICF 33
>gi|18311192|ref|NP_563126.1| hypothetical protein CPE2210 [Clostridium perfringens str. 13]
gi|18145875|dbj|BAB81916.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 326
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS D+ V + F
Sbjct: 3 RALAMVSGGLDSILAAKLIKDQGIEVIGICF 33
>gi|313902383|ref|ZP_07835786.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermaerobacter subterraneus DSM 13965]
gi|313467314|gb|EFR62825.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermaerobacter subterraneus DSM 13965]
Length = 404
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 42/134 (31%), Gaps = 12/134 (8%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELM 64
+ L SGG DSS + D+ V ++ + E E R C V+
Sbjct: 5 RKGRVLAAMSGGVDSSVMAALLRDQGYEVIGVTMQTWPAMEPEDEARYGGCCSLSAVDDA 64
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAA 120
+ + LG + + + + + PN P R I F F
Sbjct: 65 RRVAERLGIPYYVM--NMRQDFEEKVIDYFVAEYLQGRTPN---PCIACNRYIKFDEF-L 118
Query: 121 TLAYRLGITNIVIG 134
A LG + G
Sbjct: 119 RRAEALGCDYVATG 132
>gi|307243697|ref|ZP_07525837.1| GMP synthase (glutamine-hydrolyzing) [Peptostreptococcus stomatis
DSM 17678]
gi|306492906|gb|EFM64919.1| GMP synthase (glutamine-hydrolyzing) [Peptostreptococcus stomatis
DSM 17678]
Length = 511
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
AL SGG DSS + D + + D+G
Sbjct: 216 KKALCALSGGVDSSVAAALMHRAIGDNLTCVFVDHG 251
>gi|281415680|ref|ZP_06247422.1| GMP synthase (glutamine-hydrolyzing) [Micrococcus luteus NCTC 2665]
Length = 539
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG---QRNKVELECRLCVRKKIVELM 64
A+ SGG DS+ + DR+ + D+G + E+E L+
Sbjct: 232 KRAICGLSGGVDSAVAAALVQRAIGDRLTCVYVDHGLMREGESAEIEQAFGEAHGGARLV 291
>gi|150398931|ref|YP_001322698.1| PP-loop domain-containing protein [Methanococcus vannielii SB]
gi|150011634|gb|ABR54086.1| PP-loop domain protein [Methanococcus vannielii SB]
Length = 323
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFD 41
N+II ++ SGG+DS L + ++ D
Sbjct: 69 NNIISPKDKVVVGLSGGKDSLALLHLLEPYKRKYGVEIHAITVD 112
>gi|15894260|ref|NP_347609.1| argininosuccinate synthase [Clostridium acetobutylicum ATCC 824]
gi|24211521|sp|Q97KE6|ASSY_CLOAB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|15023879|gb|AAK78949.1|AE007613_5 Argininosuccinate synthase [Clostridium acetobutylicum ATCC 824]
gi|325508387|gb|ADZ20023.1| argininosuccinate synthase [Clostridium acetobutylicum EA 2018]
Length = 400
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+L +SGG D+S + W D +D V + + GQ
Sbjct: 1 MKEKVVLAYSGGLDTSVTIPWLKDNYDVEVIAVCVNVGQ 39
>gi|134294775|ref|YP_001118510.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia vietnamiensis
G4]
gi|205813829|sp|A4JBM2|MNMA_BURVG RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|134137932|gb|ABO53675.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia vietnamiensis G4]
Length = 384
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|331002369|ref|ZP_08325887.1| argininosuccinate synthase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330410185|gb|EGG89619.1| argininosuccinate synthase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 410
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + F V D GQ N+++ LE R + +
Sbjct: 2 SKEKVVLAYSGGLDTTAIIPWLKEHFDYDVICCCIDCGQGNELDGLEERAKLSGAEKLYI 61
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +D+I+P G + + +M
Sbjct: 62 IDMIDEFCDDYIIPCVQAGAVYENKYLLGTSMA 94
>gi|315612257|ref|ZP_07887171.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis ATCC 49296]
gi|315315650|gb|EFU63688.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis ATCC 49296]
Length = 415
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 43 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 78
>gi|303249410|ref|ZP_07335633.1| asparagine synthase [Desulfovibrio fructosovorans JJ]
gi|302489188|gb|EFL49157.1| asparagine synthase [Desulfovibrio fructosovorans JJ]
Length = 273
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 42/191 (21%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+I+ +AL+ FSGG DS L ALD + V ++ L +
Sbjct: 13 VIRPCKTALVAFSGGVDSLLVLRAALDALSPEAVPAVT----------LRTPYTPPHDVA 62
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ IL + + + + K ++F +
Sbjct: 63 AATRAARNMGARHEILDIPFPEALRDNPPERCYTCKR--------------LLFGRLVDS 108
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYE 179
A G+ N+ G D D R + LG + +PL+ L K +
Sbjct: 109 -AAASGLGNVFDGTNADDLD---DHRPG----MRAVKELG------IVSPLLAAGLAKAD 154
Query: 180 TWKLAQDIGGQ 190
+L++++G
Sbjct: 155 IRRLSRELGLP 165
>gi|293364413|ref|ZP_06611139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus oralis ATCC 35037]
gi|291317259|gb|EFE57686.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus oralis ATCC 35037]
Length = 415
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 43 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 78
>gi|257438245|ref|ZP_05614000.1| GMP synthase [Faecalibacterium prausnitzii A2-165]
gi|257199322|gb|EEU97606.1| GMP synthase [Faecalibacterium prausnitzii A2-165]
Length = 516
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 10 SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYG--QRNKVELEC 52
L SGG DSS + A ++ + D+G ++N+ E C
Sbjct: 217 KVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKEEVC 262
>gi|161486247|ref|NP_753421.2| tRNA-specific 2-thiouridylase MnmA [Escherichia coli CFT073]
gi|30173414|sp|Q8CXZ8|MNMA_ECOL6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 368
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|71483021|gb|AAZ32455.1| NH(3)-dependent NAD+ synthetase [uncultured euryarchaeote Alv-FOS1]
Length = 264
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 10 SALLLFSGGQDSSTCLSW-ALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ SGG DS+ L A+ +RV + + E E V K+ +
Sbjct: 27 KVVVGLSGGLDSAVVLKLCAMSLGPERVLAVHMPDSVTPEEESEDARNVAKEAEVEFREI 86
Query: 68 KDSLGEDHILPLAILGDISHSSLTK 92
+ + I +A L + K
Sbjct: 87 RIDDAVETIADMAALESSGAVANLK 111
>gi|307941982|ref|ZP_07657334.1| asparagine synthase (glutamine-hydrolysing) 1 [Roseibium sp.
TrichSKD4]
gi|307774772|gb|EFO33981.1| asparagine synthase (glutamine-hydrolysing) 1 [Roseibium sp.
TrichSKD4]
Length = 371
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
++ SGG DSS + A + +++T S + R+ E++ R R
Sbjct: 18 VMLSGGLDSSCVAAAAREAGFKLKTYSVAF--RDAPEIDERPYAR 60
>gi|297183634|gb|ADI19760.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
Length = 538
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRF--DRVETLS--FDYGQRNKVELECRL 54
M D + K P +L SGG DS+ L+ A+D +RVE + F Y +E
Sbjct: 270 MRDYVNKNGFPGVVLGLSGGIDSAVTLAVAVDALGPERVEAVMMPFRYTASMSIEDAAEQ 329
Query: 55 CVRKKIV 61
+ +
Sbjct: 330 ANTQGVA 336
>gi|306821357|ref|ZP_07454965.1| PP-loop superfamily ATP-binding protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550575|gb|EFM38558.1| PP-loop superfamily ATP-binding protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 278
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFD 41
L+ FSGG DSS L A + V ++F+
Sbjct: 25 EKVLIAFSGGVDSSLVLKIAREVTEKSNVIAVTFN 59
>gi|300313497|ref|YP_003777589.1| asparagine synthase [Herbaspirillum seropedicae SmR1]
gi|300076282|gb|ADJ65681.1| asparagine synthase (glutamine-hydrolyzing) protein [Herbaspirillum
seropedicae SmR1]
Length = 627
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DSS + A RV+ S + + EL V K + + + +
Sbjct: 260 VFLSGGVDSSLIAALAARHNKRVKAFSIGFAEVQYNELPYSEAVAKHLG--IEQHVHIVT 317
Query: 73 EDHILP 78
D I+
Sbjct: 318 CDDIID 323
>gi|298245195|ref|ZP_06969001.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Ktedonobacter racemifer DSM 44963]
gi|297552676|gb|EFH86541.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Ktedonobacter racemifer DSM 44963]
Length = 391
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + ++ V +
Sbjct: 3 RIVVAMSGGVDSSVAAALLKEQGHEVIGM 31
>gi|283851129|ref|ZP_06368413.1| argininosuccinate synthase [Desulfovibrio sp. FW1012B]
gi|283573525|gb|EFC21501.1| argininosuccinate synthase [Desulfovibrio sp. FW1012B]
Length = 398
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T++ D GQ +++ LE +
Sbjct: 1 MSTIKKVVLAYSGGLDTSVILKWIKKTYACEVVTVTCDLGQEEELDGLEDKALRTGATKA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDI 85
+ ++ +D I P+ G +
Sbjct: 61 YIDDLREEFAKDFIFPMLRAGAV 83
>gi|239918131|ref|YP_002957689.1| GMP synthase (glutamine-hydrolyzing) [Micrococcus luteus NCTC 2665]
gi|259647685|sp|C5CBZ4|GUAA_MICLC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|239839338|gb|ACS31135.1| GMP synthase (glutamine-hydrolyzing) [Micrococcus luteus NCTC 2665]
Length = 539
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG---QRNKVELECRLCVRKKIVELM 64
A+ SGG DS+ + DR+ + D+G + E+E L+
Sbjct: 232 KRAICGLSGGVDSAVAAALVQRAIGDRLTCVYVDHGLMREGESAEIEQAFGEAHGGARLV 291
>gi|313127004|ref|YP_004037274.1| sulfate adenylyltransferase subunit 2 [Halogeometricum borinquense
DSM 11551]
gi|312293369|gb|ADQ67829.1| sulfate adenylyltransferase subunit 2 [Halogeometricum borinquense
DSM 11551]
Length = 323
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 58/152 (38%), Gaps = 27/152 (17%)
Query: 5 IKKAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVE----------- 49
+++ + +++++GG+DS+ CL A V F ++ E
Sbjct: 42 LEQYENPVVMWTGGKDSTLCLYFIKEVAEKHGYDVPPAVFIDHYQHFDEIHDFVDKWADE 101
Query: 50 --LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--- 104
L+ + + + + S G+D + ++ L + H+ ++ +D P
Sbjct: 102 WDLDVIYARNEDVGAYVDEHSLSPGDD--IDISELSE--HNQHHVRNLLEYEDETFPFLL 157
Query: 105 NTFVPGRNIIFLVFAATLA-YRLGITNIVIGV 135
+T+V N + A A + ++ GV
Sbjct: 158 DTYVG--NHLLKTVALNDALEEYDVDGVISGV 187
>gi|254510416|ref|ZP_05122483.1| argininosuccinate synthase [Rhodobacteraceae bacterium KLH11]
gi|221534127|gb|EEE37115.1| argininosuccinate synthase [Rhodobacteraceae bacterium KLH11]
Length = 407
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAELL 55
>gi|124027202|ref|YP_001012522.1| argininosuccinate synthase [Hyperthermus butylicus DSM 5456]
gi|166219971|sp|A2BJL6|ASSY_HYPBU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|123977896|gb|ABM80177.1| Argininosuccinate synthase [Hyperthermus butylicus DSM 5456]
Length = 396
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+L +SGG D+S L ++ V T++ GQ
Sbjct: 2 KVVLAYSGGLDTSAILVLLREQGHEVVTVTVSVGQ 36
>gi|325281986|ref|YP_004254528.1| tRNA-specific 2-thiouridylase mnmA [Odoribacter splanchnicus DSM
20712]
gi|324313795|gb|ADY34348.1| tRNA-specific 2-thiouridylase mnmA [Odoribacter splanchnicus DSM
20712]
Length = 349
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 6/31 (19%), Positives = 11/31 (35%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DS + V ++
Sbjct: 2 KKVVVGMSGGVDSFVTALLLRRQGYEVIGVT 32
>gi|322375113|ref|ZP_08049627.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. C300]
gi|321280613|gb|EFX57652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. C300]
Length = 415
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 43 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 78
>gi|320164803|gb|EFW41702.1| argininosuccinate synthase [Capsaspora owczarzaki ATCC 30864]
Length = 457
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
+ LLL+SGG D+S L W + + V L+ + GQ
Sbjct: 24 TCLLLYSGGLDTSVMLKWIQEEYKCSVIALTLNLGQ 59
>gi|313113561|ref|ZP_07799149.1| GMP synthase protein [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624076|gb|EFQ07443.1| GMP synthase protein [Faecalibacterium cf. prausnitzii KLE1255]
Length = 524
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 10 SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYG--QRNKVELEC 52
L SGG DSS + A ++ + D+G ++N+ E C
Sbjct: 225 KVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKEEVC 270
>gi|309776979|ref|ZP_07671949.1| GMP synthase, C- domain protein [Erysipelotrichaceae bacterium
3_1_53]
gi|308915390|gb|EFP61160.1| GMP synthase, C- domain protein [Erysipelotrichaceae bacterium
3_1_53]
Length = 430
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L ++ + ++G
Sbjct: 136 RKVLLALSGGVDSSVVAALLLKAIGKQLYCVHVNHG 171
>gi|307595862|ref|YP_003902179.1| ATP binding protein [Vulcanisaeta distributa DSM 14429]
gi|307551063|gb|ADN51128.1| ATP binding protein [Vulcanisaeta distributa DSM 14429]
Length = 233
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETL 38
LFSGG+DS+ L WA+ + V L
Sbjct: 6 LFSGGKDSTYALHWAVLKGFDVVCL 30
>gi|300710635|ref|YP_003736449.1| GMP synthase subunit B [Halalkalicoccus jeotgali B3]
gi|299124318|gb|ADJ14657.1| GMP synthase subunit B [Halalkalicoccus jeotgali B3]
Length = 305
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 40/108 (37%), Gaps = 13/108 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE------------CRLCV 56
+A++ SGG DSS + A + D++ + D G K E E +
Sbjct: 23 NAVIALSGGVDSSVAAALAYEAVGDQLTPVYVDTGLMRKGETEQVSETFSYMESLRVVDA 82
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
++ ++L+ D + ++ + + + + +Q P
Sbjct: 83 EERFLDLLSGVTDPEAKREVIGEGFIREFEREAKEADADYLVQGTIYP 130
>gi|295105625|emb|CBL03169.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
domain or A subunit [Faecalibacterium prausnitzii SL3/3]
Length = 516
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 10 SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYG--QRNKVELEC 52
L SGG DSS + A ++ + D+G ++N+ E C
Sbjct: 217 KVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKEEVC 262
>gi|290473675|ref|YP_003466547.1| TilS, tRNA(Ile)-lysidine synthetase [Xenorhabdus bovienii
SS-2004]
gi|289172980|emb|CBJ79751.1| TilS, tRNA(Ile)-lysidine synthetase [Xenorhabdus bovienii
SS-2004]
Length = 449
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
D + + L+ FSGG DS+ L + + + R+++EL + + +
Sbjct: 14 DQLGRHKKVLVGFSGGLDSTVLLHLLVQLRYQSHSGVI----RDQIEL-RAIHIHHGLNP 68
Query: 63 LMPKWKDS 70
KW +
Sbjct: 69 KADKWVEH 76
>gi|238760683|ref|ZP_04621806.1| Argininosuccinate synthase [Yersinia aldovae ATCC 35236]
gi|238701100|gb|EEP93694.1| Argininosuccinate synthase [Yersinia aldovae ATCC 35236]
Length = 454
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ + E + +K +E + +
Sbjct: 18 FSGGLDTSAALLWMKQKGAVPYAYTANLGQ---PDEEDYDAIPRKAMEYGAEKARLIDCR 74
Query: 75 HILPLAILGDISHSSLTKNVA 95
L + I + A
Sbjct: 75 KQLVAEGIAAIQCGAFHNTTA 95
>gi|182683091|ref|YP_001834838.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CGSP14]
gi|182628425|gb|ACB89373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CGSP14]
Length = 391
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 19 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 54
>gi|154149122|ref|YP_001406622.1| argininosuccinate synthase [Campylobacter hominis ATCC BAA-381]
gi|166219957|sp|A7I281|ASSY_CAMHC RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|153805131|gb|ABS52138.1| argininosuccinate synthase [Campylobacter hominis ATCC BAA-381]
Length = 406
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK----VELECRLCVRK 58
+KK ++L +SGG D+S L W D + V T + D GQ E +L ++K
Sbjct: 1 MKKNVKKVVLAYSGGLDTSVILKWLEDNYKCEVVTFTADIGQNEDLKPIKEKALKLGIKK 60
Query: 59 KIVELMPKWKDSLGEDHILPL 79
+ + + ++ D++ P+
Sbjct: 61 ENI-FIKDLREEFVRDYVFPM 80
>gi|125624516|ref|YP_001032999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactococcus lactis subsp. cremoris MG1363]
gi|124493324|emb|CAL98297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactococcus lactis subsp. cremoris MG1363]
gi|300071310|gb|ADJ60710.1| tRNA-specific 2-thiouridylase MnmA [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 384
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ ++ SGG DSS ++ V +
Sbjct: 9 MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 46
>gi|89891099|ref|ZP_01202607.1| argininosuccinate synthase [Flavobacteria bacterium BBFL7]
gi|89516743|gb|EAS19402.1| argininosuccinate synthase [Flavobacteria bacterium BBFL7]
Length = 398
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ ++ +SGG D+S C + D V + + G + +L+ K+
Sbjct: 1 MNNNKKLVIAYSGGLDTSYCAVYLSQDLGYEVHAVCVNTGGFTQEDLKTIESNAYKMGVS 60
Query: 64 MPKWKDSLGE--DHILPLAILGDISHS 88
K D++ D ++ I G++ +
Sbjct: 61 TFKAIDAVSTFYDKVVKYLIYGNVLKN 87
>gi|73661485|ref|YP_300266.1| PP family ATPase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494000|dbj|BAE17321.1| ATP-utilizing enzyme of the PP-loop superfamily [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 274
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKI- 60
I+K S ++ FSGG DSS L A+D D V+ + E + + + ++
Sbjct: 15 ILKDMNSVIVAFSGGVDSSLVLKKAIDVLGHDHVKAVIVKSELTRNEEFDQAIALAHQLN 74
Query: 61 VELMPKWKDSLGEDHIL 77
+++ ++L + HI+
Sbjct: 75 AQVIETEIEALKDPHIV 91
>gi|15672819|ref|NP_266993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactococcus lactis subsp. lactis Il1403]
gi|12723762|gb|AAK04935.1|AE006317_4 tRNA-methyltransferase [Lactococcus lactis subsp. lactis Il1403]
gi|326406382|gb|ADZ63453.1| 5-methylaminomethyl-2-thiouridylate-tRNA methyltransferase
[Lactococcus lactis subsp. lactis CV56]
Length = 384
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ ++ SGG DSS ++ V +
Sbjct: 9 MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 46
>gi|308186449|ref|YP_003930580.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Pantoea vagans C9-1]
gi|308056959|gb|ADO09131.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Pantoea vagans C9-1]
Length = 370
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAWLLQQQGYQVEGL 36
>gi|304397251|ref|ZP_07379130.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pantoea sp. aB]
gi|304355400|gb|EFM19768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pantoea sp. aB]
Length = 370
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAWLLQQQGYQVEGL 36
>gi|295101943|emb|CBK99488.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
domain or A subunit [Faecalibacterium prausnitzii L2-6]
Length = 516
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 10 SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYG--QRNKVELEC 52
L SGG DSS + A ++ + D+G ++N+ E C
Sbjct: 217 KVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKEEVC 262
>gi|295698551|ref|YP_003603206.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Candidatus
Riesia pediculicola USDA]
gi|291157496|gb|ADD79941.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Candidatus
Riesia pediculicola USDA]
Length = 454
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 8/68 (11%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSW------ALDRFDRVETLSFDYGQRNKVELECRLC 55
+ + L+ FSGG DS+ L + + + + E
Sbjct: 16 SKSLNPFKKVLVGFSGGMDSTVLLHILMTLRKLKKIKIDLRAIHIN--HHLQKESNLWES 73
Query: 56 VRKKIVEL 63
KKI +L
Sbjct: 74 HCKKICDL 81
>gi|262039106|ref|ZP_06012439.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptotrichia goodfellowii F0264]
gi|261746895|gb|EEY34401.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Leptotrichia goodfellowii F0264]
Length = 365
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ +L SGG DSS ++ V +
Sbjct: 2 RNKKVVLGMSGGVDSSVAAILLKEQGYDVIGV 33
>gi|297565299|ref|YP_003684271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Meiothermus silvanus DSM 9946]
gi|296849748|gb|ADH62763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Meiothermus silvanus DSM 9946]
Length = 371
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE 36
++ L+ SGG DSS + + V
Sbjct: 1 MLVSKGRVLVAMSGGVDSSVSAALLKAQGYEVI 33
>gi|217969633|ref|YP_002354867.1| tRNA-specific 2-thiouridylase MnmA [Thauera sp. MZ1T]
gi|217506960|gb|ACK53971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thauera sp. MZ1T]
Length = 365
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 17/131 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DS+ + +V L + + + C ++ + + D
Sbjct: 2 KVVVGMSGGVDSAVTALLLKRQGYQVTGLFMK---NWEDDDDSEYCSTRQDLVDVASVCD 58
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATLA 123
+G D L + + + + + P N+ + R FL A
Sbjct: 59 VIGID--LEVVNFSAEYKDRVFADFLHEYEAGRTPNPDVLCNSEIKFR--CFLD----HA 110
Query: 124 YRLGITNIVIG 134
+LG I G
Sbjct: 111 MQLGAERIATG 121
>gi|149133681|gb|ABR21024.1| tRNA methyltransferase [Rhodothermus sp. XMH10]
Length = 51
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSF---DY---GQRNKVELEC 52
SGG DSS + ++ V ++ DY G R E+ C
Sbjct: 3 MSGGVDSSVTAALLHEQGYEVVGITMKTWDYTSSGVRTGKEVGC 46
>gi|170724702|ref|YP_001758728.1| argininosuccinate synthase [Shewanella woodyi ATCC 51908]
gi|229889896|sp|B1KND6|ASSY_SHEWM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|169810049|gb|ACA84633.1| Argininosuccinate synthase [Shewanella woodyi ATCC 51908]
Length = 408
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELEC--RL 54
M+ IKK +L +SGG D+S + W + +D E ++F D GQ + ELE
Sbjct: 1 MSAEIKKTGVKKVVLAYSGGLDTSAIIPWLKETYDDCEIVAFCADVGQ-GEAELEGLHEK 59
Query: 55 CVRKKIVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ E + K+ L D+I P G I + +M
Sbjct: 60 AIASGASECYIVDLKEELVADYIYPTIATGAIYEGTYLLGTSMA 103
>gi|116511650|ref|YP_808866.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactococcus lactis subsp. cremoris SK11]
gi|116107304|gb|ABJ72444.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactococcus lactis subsp. cremoris SK11]
Length = 384
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ ++ SGG DSS ++ V +
Sbjct: 9 MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 46
>gi|90408225|ref|ZP_01216392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Psychromonas sp. CNPT3]
gi|90310671|gb|EAS38789.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Psychromonas sp. CNPT3]
Length = 369
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 42/142 (29%), Gaps = 38/142 (26%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
++ SGG DSS + +VE L +N E + C + ++
Sbjct: 8 KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFM----KNWEEDDSSEYCAAAQDLQDAQAVC 63
Query: 69 DSLGE----------------DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
D L +H L G + + N +K +
Sbjct: 64 DKLDIKLHTVNFSAEYWDNVFEHFLAEYKAGRTPNPDIMCNKEIKFKA------------ 111
Query: 113 IIFLVFAATLAYRLGITNIVIG 134
FL FA A LG I G
Sbjct: 112 --FLEFA---AEDLGADFIATG 128
>gi|15603201|ref|NP_246275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pasteurella multocida subsp. multocida str. Pm70]
gi|14195272|sp|Q9CLA3|MNMA_PASMU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|12721705|gb|AAK03420.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 383
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + SGG DSS + +VE L
Sbjct: 21 NRKKKVICGMSGGVDSSVSAFILQQQGYQVEGL 53
>gi|95928619|ref|ZP_01311366.1| Argininosuccinate synthase [Desulfuromonas acetoxidans DSM 684]
gi|95135409|gb|EAT17061.1| Argininosuccinate synthase [Desulfuromonas acetoxidans DSM 684]
Length = 405
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
A+L +SGG D+S L W ++ + V + D GQ EL+ KK +
Sbjct: 8 KKAVLAYSGGLDTSIILKWLVEEYGCEVIAFAADLGQ--GEELDFIPEKAKKTGASKCFI 65
Query: 65 PKWKDSLGEDHILPLAILGDI 85
++ D + P+ I
Sbjct: 66 EDLREEFVRDFVFPMFRANAI 86
>gi|295094884|emb|CBK83975.1| asparagine synthase (glutamine-hydrolyzing) [Coprococcus sp.
ART55/1]
Length = 618
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 17/136 (12%)
Query: 15 FSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
SGG DSS C + ++ ++ T SFD+ + N + ++ +
Sbjct: 269 LSGGIDSSIVSSVCAAKLREQGKKLHTFSFDF-KDNSKYFKSNAFQPEQDRPYVDMMVAH 327
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGIT 129
+G DH D++ T ++ ++P V + F A
Sbjct: 328 IGSDHTYLTCNYSDLADYLYTS-----VESRDMPTMADVDSSLLYFCSLVA-----KEYK 377
Query: 130 NIVIGVCETD-YSGYP 144
++ G C + + GYP
Sbjct: 378 VVLTGECADEIFGGYP 393
>gi|295398455|ref|ZP_06808494.1| argininosuccinate synthase [Aerococcus viridans ATCC 11563]
gi|294973319|gb|EFG49107.1| argininosuccinate synthase [Aerococcus viridans ATCC 11563]
Length = 429
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK 58
M LL +SGG D+S + W + + V ++ + GQ E V
Sbjct: 1 MARTKADIKKVLLAYSGGLDTSVIIPWLKENYNDCEVIGMTGNVGQEEDFEFLKEKAVAC 60
Query: 59 KIVELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVA 95
+L ++ D+I P G S+ A
Sbjct: 61 GATKLYVEDLREEFITDYIFPAIQAGAKYESTYLLGTA 98
>gi|258593690|emb|CBE70031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[NC10 bacterium 'Dutch sediment']
Length = 357
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLS 39
SGG DS+ + +++ V +S
Sbjct: 1 MSGGVDSAVAAALLIEQGYEVVGIS 25
>gi|256619544|ref|ZP_05476390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis ATCC 4200]
gi|307276004|ref|ZP_07557137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX2134]
gi|256599071|gb|EEU18247.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis ATCC 4200]
gi|295113315|emb|CBL31952.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus sp. 7L76]
gi|306507334|gb|EFM76471.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX2134]
Length = 374
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K+ ++ SGG DSS ++ V +
Sbjct: 1 MADNSKR--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|228910456|ref|ZP_04074271.1| Argininosuccinate synthase [Bacillus thuringiensis IBL 200]
gi|228849222|gb|EEM94061.1| Argininosuccinate synthase [Bacillus thuringiensis IBL 200]
Length = 411
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ V L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 48
>gi|228967727|ref|ZP_04128744.1| Argininosuccinate synthase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228791949|gb|EEM39534.1| Argininosuccinate synthase [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 411
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ V L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 48
>gi|256380515|ref|YP_003104175.1| GMP synthase [Actinosynnema mirum DSM 43827]
gi|255924818|gb|ACU40329.1| GMP synthase, large subunit [Actinosynnema mirum DSM 43827]
Length = 519
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 15/83 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE---------CRL 54
A+ SGG DS+ + DR+ + D+ G+R +VE + +
Sbjct: 221 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERTQVERDFVASTGVNLVTV 280
Query: 55 CVRKKIVELMPKWKDSLGEDHIL 77
R++ ++ + D + I+
Sbjct: 281 DARQRFLDALAGVTDPEEKRKII 303
>gi|225620410|ref|YP_002721667.1| argininosuccinate lyase [Brachyspira hyodysenteriae WA1]
gi|254807509|sp|C0R1H5|ASSY_BRAHW RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|225215229|gb|ACN83963.1| argininosuccinate lyase [Brachyspira hyodysenteriae WA1]
Length = 406
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + + V + D GQ + + LE + + +
Sbjct: 1 MKKKLVLAYSGGLDTTVIIPWLKENYDYDVIAVCVDVGQGTETDGLEEKALKTGAVKYRL 60
Query: 65 PKWKDSLGEDHILPL 79
K +D D+I P+
Sbjct: 61 VKCEDEFVTDYIYPI 75
>gi|218133009|ref|ZP_03461813.1| hypothetical protein BACPEC_00870 [Bacteroides pectinophilus ATCC
43243]
gi|217991882|gb|EEC57886.1| hypothetical protein BACPEC_00870 [Bacteroides pectinophilus ATCC
43243]
Length = 375
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS ++ V ++
Sbjct: 14 KERVVVGMSGGVDSSVAACLLKEQGYDVIGVT 45
>gi|168215140|ref|ZP_02640765.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens CPE str.
F4969]
gi|170713441|gb|EDT25623.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens CPE str.
F4969]
Length = 469
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 15/105 (14%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
N +I+ L+ SGG DS L + + V + + + E L
Sbjct: 12 NSMIESGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
+ EL + DI+ S +N++ ++
Sbjct: 68 AYVEELCKNLNIKCFVKRV-------DINKISEEQNISTEMAGRE 105
>gi|169343171|ref|ZP_02864192.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens C str.
JGS1495]
gi|169298723|gb|EDS80799.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens C str.
JGS1495]
Length = 469
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 15/105 (14%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
N +I+ L+ SGG DS L + + V + + + E L
Sbjct: 12 NSMIESGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
+ EL + DI+ S +N++ ++
Sbjct: 68 AYVEELCKNLNIKCFVKRV-------DINKISEEQNISTEMAGRE 105
>gi|163813986|ref|ZP_02205379.1| hypothetical protein COPEUT_00138 [Coprococcus eutactus ATCC 27759]
gi|158450680|gb|EDP27675.1| hypothetical protein COPEUT_00138 [Coprococcus eutactus ATCC 27759]
Length = 591
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 17/136 (12%)
Query: 15 FSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
SGG DSS C + ++ ++ T SFD+ + N + ++ +
Sbjct: 242 LSGGIDSSIVSSVCAAKLREQGKKLHTFSFDF-KDNSKYFKSNAFQPEQDRPYVDMMVAH 300
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLVFAATLAYRLGIT 129
+G DH D++ T ++ ++P V + F A
Sbjct: 301 IGSDHTYLTCNYSDLADYLYTS-----VESRDMPTMADVDSSLLYFCSLVA-----KEYK 350
Query: 130 NIVIGVCETD-YSGYP 144
++ G C + + GYP
Sbjct: 351 VVLTGECADEIFGGYP 366
>gi|15613824|ref|NP_242127.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
[Bacillus halodurans C-125]
gi|14195281|sp|Q9KDF2|MNMA_BACHD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|10173877|dbj|BAB04980.1| (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Bacillus halodurans C-125]
Length = 371
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M + ++ SGG DSS ++ V +
Sbjct: 1 MEAKRPEQTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 38
>gi|84385297|ref|ZP_00988329.1| NAD(+) synthetase [Vibrio splendidus 12B01]
gi|84379894|gb|EAP96745.1| NAD(+) synthetase [Vibrio splendidus 12B01]
Length = 276
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 63/205 (30%), Gaps = 36/205 (17%)
Query: 2 NDIIKKAPSALLL-FSGGQDSSTC--LSW---------ALDRFDRVETLSFDYG-QRNKV 48
+ + +L+L SGG DS+TC L+ A + + YG Q+++
Sbjct: 30 TKLQQSGCKSLILGISGGVDSTTCGRLAQMAVNSLNESAGSDNYQFIAVRLPYGEQKDED 89
Query: 49 ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
E + L + + K + H L T + + N+
Sbjct: 90 EAQLALSFIQPSQSVSVNIKAGVDGLHAASHVALEGTGLL-PTDSAKIDFVKGNVK---- 144
Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
R A +A + V TD+S + I
Sbjct: 145 -AR-------ARMIAQYEIAGYVGGLVIGTDHSA------ENITGF----YTKHGDGACD 186
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + +LA +G + +
Sbjct: 187 LAPLFGLNKRQVRELAATLGAPEQL 211
>gi|194429520|ref|ZP_03062041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B171]
gi|194412394|gb|EDX28695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli B171]
gi|323163677|gb|EFZ49499.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli E128010]
Length = 368
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|75759980|ref|ZP_00740048.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228903149|ref|ZP_04067283.1| Argininosuccinate synthase [Bacillus thuringiensis IBL 4222]
gi|74492538|gb|EAO55686.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228856431|gb|EEN00957.1| Argininosuccinate synthase [Bacillus thuringiensis IBL 4222]
Length = 411
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ V L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 48
>gi|323507842|emb|CBQ67713.1| probable asparagine synthase [Sporisorium reilianum]
Length = 635
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+L SGG DSS S A D++ L QR + E R
Sbjct: 248 VLLSGGLDSSLIASIAARETDKMADL-----QRKQYEERQARRAR 287
>gi|313637741|gb|EFS03100.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria seeligeri FSL S4-171]
Length = 371
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHLLKEQGYDVIGI 37
>gi|315303264|ref|ZP_07873908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria ivanovii FSL F6-596]
gi|313628376|gb|EFR96865.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria ivanovii FSL F6-596]
Length = 371
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHLLKEQGYDVIGI 37
>gi|300782713|ref|YP_003763004.1| GMP synthase (glutamine-hydrolysing) [Amycolatopsis mediterranei
U32]
gi|299792227|gb|ADJ42602.1| GMP synthase (glutamine-hydrolysing) [Amycolatopsis mediterranei
U32]
Length = 518
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 15/83 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE---------CRL 54
A+ SGG DS+ + DR+ + D+ G+R +VE + +
Sbjct: 220 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERTQVEQDFVSATGVNLVTI 279
Query: 55 CVRKKIVELMPKWKDSLGEDHIL 77
R++ ++ + D + I+
Sbjct: 280 DARQRFLDALAGVTDPEQKRKII 302
>gi|289434792|ref|YP_003464664.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171036|emb|CBH27578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313633159|gb|EFS00043.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria seeligeri FSL N1-067]
Length = 371
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 RVVVGMSGGVDSSVTAHLLKEQGYDVIGI 37
>gi|239607252|gb|EEQ84239.1| argininosuccinate synthase [Ajellomyces dermatitidis ER-3]
Length = 416
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+ L +SGG D+S L+W ++R V D GQ
Sbjct: 1 MPAKDRVCLAYSGGLDTSCILAWLIERGYDVVCFLADVGQ 40
>gi|298527840|ref|ZP_07015244.1| argininosuccinate synthase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511492|gb|EFI35394.1| argininosuccinate synthase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 399
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELE 51
+ +L +SGG D+S L W +D V + D GQ + EL+
Sbjct: 1 MSGIDKVVLAYSGGLDTSVILKWIQKTYDCEVIAFTADLGQ--EEELD 46
>gi|254526367|ref|ZP_05138419.1| argininosuccinate synthase [Prochlorococcus marinus str. MIT
9202]
gi|221537791|gb|EEE40244.1| argininosuccinate synthase [Prochlorococcus marinus str. MIT
9202]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELECRLCV 56
+++ +L +SGG D+S C+ + + E ++F D GQ +EL + +
Sbjct: 1 MQQVKKVVLAYSGGVDTSVCIPYLKKEYGISEVITFVADLGQGEDLELIRQKAL 54
>gi|157414313|ref|YP_001485179.1| argininosuccinate synthase [Prochlorococcus marinus str. MIT
9215]
gi|166989394|sp|A8G7L2|ASSY_PROM2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|157388888|gb|ABV51593.1| Argininosuccinate synthase [Prochlorococcus marinus str. MIT
9215]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELECRLCV 56
+++ +L +SGG D+S C+ + + E ++F D GQ +EL + +
Sbjct: 1 MQQVKKVVLAYSGGVDTSVCIPYLKKEYGISEVITFVADLGQGEDLELIRQKAL 54
>gi|108803659|ref|YP_643596.1| GMP synthase [Rubrobacter xylanophilus DSM 9941]
gi|108764902|gb|ABG03784.1| GMP synthase (glutamine-hydrolyzing) [Rubrobacter xylanophilus DSM
9941]
Length = 506
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 32/97 (32%), Gaps = 8/97 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A A+ SGG DS+T D++ + D+G R +++VE +
Sbjct: 211 ASRAICALSGGVDSATAAMLVHRAIGDKLTCVFVDHG-------LLRQNEAEQVVEAFRR 263
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
L ++ + + + + +
Sbjct: 264 EAGLPLVHVDARERFLDRLAGVTDPEAKRKIVGEEFI 300
>gi|70605951|ref|YP_254821.1| hypothetical protein Saci_0103 [Sulfolobus acidocaldarius DSM
639]
gi|68566599|gb|AAY79528.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
Length = 223
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+L+SGG+DS+ L WA+ + V L
Sbjct: 6 VLYSGGKDSTYSLHWAVFKGFDVICL 31
>gi|281491325|ref|YP_003353305.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactococcus lactis subsp. lactis KF147]
gi|14195271|sp|Q9CHA1|MNMA_LACLA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|281375066|gb|ADA64584.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Lactococcus lactis subsp. lactis KF147]
Length = 376
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ ++ SGG DSS ++ V +
Sbjct: 1 MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 38
>gi|294668754|ref|ZP_06733847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria elongata subsp. glycolytica ATCC 29315]
gi|291309271|gb|EFE50514.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria elongata subsp. glycolytica ATCC 29315]
Length = 367
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN I + ++ SGG DSS + + +V +
Sbjct: 1 MN-IDHTQQNIIVGLSGGVDSSVTAALLKQQGYQVRGI 37
>gi|256395399|ref|YP_003116963.1| sulfate adenylyltransferase subunit 2 [Catenulispora acidiphila DSM
44928]
gi|256361625|gb|ACU75122.1| sulfate adenylyltransferase, small subunit [Catenulispora
acidiphila DSM 44928]
Length = 305
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++LFSGG+DS+ L A+ F L D G E + R +I E
Sbjct: 36 VILFSGGKDSTVLLHLAVKAFWPAPVPFPLLHVDTGHN----FEEVIAFRDRIAERYGLR 91
Query: 68 KDSLGEDHILPLAILGD 84
+ + L +
Sbjct: 92 LEVARVQEWIDDGRLAE 108
>gi|239625398|ref|ZP_04668429.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47_FAA]
gi|239519628|gb|EEQ59494.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47FAA]
Length = 410
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++T + W + V D GQ N+++ L+ R + +
Sbjct: 1 MKEKVILAYSGGLDTTTIIPWLKENFGYEVICCCIDCGQGNELDGLDERAKLSGASKLYI 60
Query: 65 PKWKDSLGEDHILP 78
D +++I+P
Sbjct: 61 EDLVDDFCDNYIMP 74
>gi|254522025|ref|ZP_05134080.1| tRNA [Stenotrophomonas sp. SKA14]
gi|219719616|gb|EED38141.1| tRNA [Stenotrophomonas sp. SKA14]
Length = 428
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 21/69 (30%), Gaps = 9/69 (13%)
Query: 12 LLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L+ +SGG DS+ L W A + + + + + W
Sbjct: 15 LVGYSGGVDSTVLLHWLWRCAQASGTPLRAVHV-----HHGLQSAADDWVRHCQQQCTTW 69
Query: 68 KDSLGEDHI 76
L H+
Sbjct: 70 DIELAVHHV 78
>gi|209974232|gb|ACJ04035.1| asparagine synthetase [Brenneria rubrifaciens]
Length = 232
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 24/64 (37%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG DSS + A + SF + +EL VR +P S+
Sbjct: 148 LLSGGLDSSAITAMAAKELTQGSLPSFSVDFTHNIELFQADGVRGAPDAPLPDCWPSMLA 207
Query: 74 DHIL 77
IL
Sbjct: 208 HSIL 211
>gi|205822104|sp|Q65VV2|MNMA_MANSM RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 389
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIVGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|163816638|ref|ZP_02208001.1| hypothetical protein COPEUT_02828 [Coprococcus eutactus ATCC
27759]
gi|158447895|gb|EDP24890.1| hypothetical protein COPEUT_02828 [Coprococcus eutactus ATCC
27759]
gi|295093008|emb|CBK82099.1| argininosuccinate synthase [Coprococcus sp. ART55/1]
Length = 412
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELMP 65
+L +SGG D++ + W + + V D GQ +++E L+ R +
Sbjct: 3 KEKVVLAYSGGLDTTAIIPWLKETYGYDVICACIDVGQESELEGLDERAKYSGAEKLYII 62
Query: 66 KWKDSLGEDHILP 78
D L +++I+P
Sbjct: 63 DVVDELCDEYIMP 75
>gi|52424356|ref|YP_087493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mannheimia succiniciproducens MBEL55E]
gi|52306408|gb|AAU36908.1| TrmU protein [Mannheimia succiniciproducens MBEL55E]
Length = 400
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 40 KKKVIVGMSGGVDSSVSAFILQQQGYQVEGL 70
>gi|21674668|ref|NP_662733.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium tepidum TLS]
gi|81790728|sp|Q8KBD3|MNMA_CHLTE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|21647873|gb|AAM73075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium tepidum TLS]
Length = 366
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 14/37 (37%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ ++ SGG DS+ + + V L+
Sbjct: 1 MSSPQHVIIGLSGGVDSAVAACLLIKQGYHVTGLNIR 37
>gi|186682257|ref|YP_001865453.1| asparagine synthase [Nostoc punctiforme PCC 73102]
gi|186464709|gb|ACC80510.1| asparagine synthase [Nostoc punctiforme PCC 73102]
Length = 612
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ SGG DSS + + +V + D+G
Sbjct: 249 VFLSGGLDSSVVAALLVQAGVKVRAYTLDFG 279
>gi|306826063|ref|ZP_07459399.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304431779|gb|EFM34759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 415
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 43 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 78
>gi|289522366|ref|ZP_06439220.1| Sua5/YciO/YrdC family protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504202|gb|EFD25366.1| Sua5/YciO/YrdC family protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 238
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 64/182 (35%), Gaps = 37/182 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+I++ + L+ SGG+DSS L AL RV + F+ + IV+
Sbjct: 22 SMIEEGDNVLVGLSGGKDSSLLL-IALKHLQRVSPIRFN--------------IEAMIVD 66
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG-RNIIFLVFAAT 121
D G ++ +H + +KI+ P +F R I +
Sbjct: 67 PTGGQFDPAGLKEFCE-SLDVPFTHYAYPIFEIIKIRREKSPCSFCANMRRGIL----SG 121
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT--PLMWLKKYE 179
+A G I +G TD + + L + +HT P W + +
Sbjct: 122 IAKDRGFRKIALGHHLTDAT--------------VTLMLNIFFSGRLHTLQPKTWQSRTQ 167
Query: 180 TW 181
TW
Sbjct: 168 TW 169
>gi|217967878|ref|YP_002353384.1| protein of unknown function DUF814 [Dictyoglomus turgidum DSM
6724]
gi|217336977|gb|ACK42770.1| protein of unknown function DUF814 [Dictyoglomus turgidum DSM
6724]
Length = 327
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+KKA A+ L SGG DS L + V ++F
Sbjct: 1 MKKA-RAISLISGGLDSILATWLILQQNIDVIGITFS 36
>gi|205822381|sp|A2RLX1|MNMA_LACLM RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 376
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ ++ SGG DSS ++ V +
Sbjct: 1 MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 38
>gi|167586157|ref|ZP_02378545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia ubonensis Bu]
Length = 382
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|139474002|ref|YP_001128718.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes str.
Manfredo]
gi|189030666|sp|A2RF72|THII_STRPG RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|134272249|emb|CAM30501.1| putative thiamine biosynthesis protein [Streptococcus pyogenes str.
Manfredo]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|308800522|ref|XP_003075042.1| AsnB Asparagine synthase (glutamine-hydrolyzing) or related prot
(IC) [Ostreococcus tauri]
gi|116061596|emb|CAL52314.1| AsnB Asparagine synthase (glutamine-hydrolyzing) or related prot
(IC) [Ostreococcus tauri]
Length = 534
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETL 38
++ S +LFSGG DS+T + A FD+V L
Sbjct: 258 STSTRSASVAILFSGGLDSTTLATLAHRHMPFDQVIDL 295
>gi|94990196|ref|YP_598296.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
MGAS10270]
gi|189030664|sp|Q1JHI4|THII_STRPD RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|94543704|gb|ABF33752.1| Thiamine biosynthesis protein thiI [Streptococcus pyogenes
MGAS10270]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|94994115|ref|YP_602213.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
MGAS10750]
gi|189030665|sp|Q1J7A5|THII_STRPF RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|94547623|gb|ABF37669.1| Thiamine biosynthesis protein thiI [Streptococcus pyogenes
MGAS10750]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|94988317|ref|YP_596418.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
MGAS9429]
gi|189030663|sp|Q1JMD8|THII_STRPC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|94541825|gb|ABF31874.1| thiamine biosynthesis protein [Streptococcus pyogenes MGAS9429]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|71910444|ref|YP_281994.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
MGAS5005]
gi|71853226|gb|AAZ51249.1| thiamine biosynthesis protein [Streptococcus pyogenes MGAS5005]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|71903277|ref|YP_280080.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
MGAS6180]
gi|94992193|ref|YP_600292.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
MGAS2096]
gi|123640105|sp|Q48U81|THII_STRPM RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|189030662|sp|Q1JCG0|THII_STRPB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|71802372|gb|AAX71725.1| thiamine biosynthesis protein [Streptococcus pyogenes MGAS6180]
gi|94545701|gb|ABF35748.1| Thiamine biosynthesis protein thiI [Streptococcus pyogenes
MGAS2096]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|21910086|ref|NP_664354.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes MGAS315]
gi|21904277|gb|AAM79157.1| putative thiamine biosynthesis protein [Streptococcus pyogenes
MGAS315]
Length = 384
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 159 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 189
>gi|15902166|ref|NP_357716.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae R6]
gi|15457661|gb|AAK98926.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae R6]
Length = 391
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 19 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 54
>gi|19745897|ref|NP_607033.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
MGAS8232]
gi|50913994|ref|YP_059966.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
MGAS10394]
gi|306827578|ref|ZP_07460859.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pyogenes ATCC 10782]
gi|23822242|sp|Q8P1G9|THII_STRP8 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|73919869|sp|Q5XCT0|THII_STRP6 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|19748050|gb|AAL97532.1| putative thiamine biosynthesis protein [Streptococcus pyogenes
MGAS8232]
gi|50903068|gb|AAT86783.1| Thiamine biosynthesis protein [Streptococcus pyogenes MGAS10394]
gi|304430230|gb|EFM33258.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
pyogenes ATCC 10782]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|28896216|ref|NP_802566.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes SSI-1]
gi|30173444|sp|Q8K7Z0|THII_STRP3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|28811467|dbj|BAC64399.1| putative thiamine biosynthesis protein [Streptococcus pyogenes
SSI-1]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|15674858|ref|NP_269032.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes M1 GAS]
gi|20140739|sp|Q9A0D8|THII_STRP1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|13621993|gb|AAK33753.1| putative thiamine biosynthesis protein [Streptococcus pyogenes M1
GAS]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|56807551|ref|ZP_00365472.1| COG0301: Thiamine biosynthesis ATP pyrophosphatase [Streptococcus
pyogenes M49 591]
gi|209559185|ref|YP_002285657.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes NZ131]
gi|226729112|sp|B5XKV0|THII_STRPZ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|209540386|gb|ACI60962.1| Probable thiamine biosynthesis protein thiI [Streptococcus pyogenes
NZ131]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS AL R +E + F
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGLDIEVVHF 209
>gi|305680191|ref|ZP_07403001.1| GMP synthase (glutamine-hydrolyzing) [Corynebacterium matruchotii
ATCC 14266]
gi|305660811|gb|EFM50308.1| GMP synthase (glutamine-hydrolyzing) [Corynebacterium matruchotii
ATCC 14266]
Length = 532
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
+ + + A+ SGG DS+ + DR+ + D+G
Sbjct: 219 VREQVGDTSRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG 262
>gi|195118114|ref|XP_002003585.1| GI17996 [Drosophila mojavensis]
gi|193914160|gb|EDW13027.1| GI17996 [Drosophila mojavensis]
Length = 694
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG 43
LLL SGG DSS C + ++ + D G
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRKALHPNQIIAVHVDNG 265
>gi|157150902|ref|YP_001449344.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus gordonii str.
Challis substr. CH1]
gi|189040513|sp|A8AU84|MNMA_STRGC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|157075696|gb|ABV10379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus gordonii str. Challis substr. CH1]
Length = 373
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|78065260|ref|YP_368029.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. 383]
gi|123569299|sp|Q39JI1|MNMA_BURS3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|77966005|gb|ABB07385.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia sp. 383]
Length = 383
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|46200003|ref|YP_005670.1| argininosuccinate synthase [Thermus thermophilus HB27]
gi|47605394|sp|P61526|ASSY_THET2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|46197630|gb|AAS82043.1| argininosuccinate synthase [Thermus thermophilus HB27]
Length = 400
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV-ELMPKW 67
+L +SGG D+S L W + + V + D GQ +VE +R +
Sbjct: 2 KIVLAYSGGLDTSIILKWLKETYGAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDL 61
Query: 68 KDSLGEDHILPL 79
K+ D + P+
Sbjct: 62 KEEFVRDFVFPM 73
>gi|300726241|ref|ZP_07059694.1| argininosuccinate synthase (Citrulline--aspartateligase)
[Prevotella bryantii B14]
gi|299776438|gb|EFI72995.1| argininosuccinate synthase (Citrulline--aspartateligase)
[Prevotella bryantii B14]
Length = 400
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ FSGG D+S + V + G N+ +L+ K
Sbjct: 3 KKKVVVAFSGGLDTSYTVMKLTQDGWDVYAACANTGGFNEEQLKVNEENAYK-------- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAAT-LAYR 125
LG + L + + SL + + NN P + R IF A A
Sbjct: 55 ---LGAVKYVTLDVTQEYYEKSLKYMIYGNVMRNNCYPISVSSER--IFQAIAIARYANE 109
Query: 126 LGITNIVIG 134
+ I G
Sbjct: 110 IQADAIAHG 118
>gi|226225516|ref|YP_002759622.1| argininosuccinate synthase [Gemmatimonas aurantiaca T-27]
gi|259585359|sp|C1A3S5|ASSY_GEMAT RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|226088707|dbj|BAH37152.1| argininosuccinate synthase [Gemmatimonas aurantiaca T-27]
Length = 445
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 1 MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
M +I+++ P + FSGG D+S L W + + + GQ
Sbjct: 1 MANILQRLPIGEKVGIAFSGGLDTSAALHWMRAKGAVPYAYTANLGQ 47
>gi|195977998|ref|YP_002123242.1| thiamine biosynthesis protein ThiI [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974703|gb|ACG62229.1| thiamine biosynthesis protein ThiI [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 398
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+L+ SGG DS +L R +E + F
Sbjct: 173 KGMLMLSGGIDSPVAGYLSLKRGVEIEAVHF 203
>gi|209549819|ref|YP_002281736.1| argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535575|gb|ACI55510.1| Argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 404
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 16/133 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ ++ +L +SGG D+S L W + + V T + D GQ ++E + +
Sbjct: 1 MARQIDKIVLAYSGGLDTSIILKWLQETYGCEVVTFTADLGQGEELEPARAKAAMLGVKD 60
Query: 63 L-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ + ++ D + P+ + ++ +
Sbjct: 61 IRIVDLREEFVRDFVFPMLRANTLYEGQYLLGSSIARP--------------LIAKHLVA 106
Query: 122 LAYRLGITNIVIG 134
+A ++G + G
Sbjct: 107 IARQIGADAVAHG 119
>gi|329926781|ref|ZP_08281189.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paenibacillus sp. HGF5]
gi|328938981|gb|EGG35349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paenibacillus sp. HGF5]
Length = 389
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS + V +
Sbjct: 25 KHNTRIVVGMSGGVDSSVTALLLKQQGYEVIGI 57
>gi|313889493|ref|ZP_07823139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pseudoporcinus SPIN 20026]
gi|313122105|gb|EFR45198.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pseudoporcinus SPIN 20026]
Length = 373
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTD--KSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|325679422|ref|ZP_08159007.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruminococcus albus 8]
gi|324109019|gb|EGC03250.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruminococcus albus 8]
Length = 356
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 63/203 (31%), Gaps = 39/203 (19%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L SGG DSS + LD+ V + + + + C VE
Sbjct: 3 KKRVLAAMSGGVDSSAAVKLLLDKGYEVAGATMHLYNNEDIGIREKNCCSLNDVEDARLV 62
Query: 68 KDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----------GRNIIFL 116
LG D H+ D + + PN P GR FL
Sbjct: 63 ALKLGIDFHVFN---FSDEFKMRVMDDFVNTYLSGGTPN---PCIECNKHLKFGR---FL 113
Query: 117 VFAATLAYRLGITNIVIGV----CETDYSGYPDCRHDTIRAIETA-----INLGMESHVT 167
A LG I G + SG R R+ + A + GM H
Sbjct: 114 E----RAELLGFDYIATGHYVTSHYDEASG----RWLLKRSADRAKDQSYVLYGMTQHQL 165
Query: 168 VHT--PLMWLKKYETWKLAQDIG 188
HT P+ + K + LA++ G
Sbjct: 166 AHTIFPVGDMNKTDIRALAEENG 188
>gi|317047745|ref|YP_004115393.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pantoea sp. At-9b]
gi|316949362|gb|ADU68837.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pantoea sp. At-9b]
Length = 370
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNSQK--KVIVGMSGGVDSSVSAWLLQQQGYQVEGL 36
>gi|242237546|ref|YP_002985727.1| argininosuccinate synthase [Dickeya dadantii Ech703]
gi|242129603|gb|ACS83905.1| argininosuccinate synthase [Dickeya dadantii Ech703]
Length = 450
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 22/55 (40%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S L W + + + GQ ++ + E K+ + D
Sbjct: 18 FSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYEAIPRRAKEYGAENARLID 72
>gi|213964113|ref|ZP_03392353.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga sputigena
Capno]
gi|213953250|gb|EEB64592.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga sputigena
Capno]
Length = 299
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCV 56
M ++ + LLFSGG+DS T + A+ F ++ + D G L R +
Sbjct: 17 MREVAAQFERPALLFSGGKDSITLVHLAMKAFAPMKIPFPLVHIDTGHNFPEALAYRDAL 76
Query: 57 RKKIVELM 64
K+I +
Sbjct: 77 AKRIGAEL 84
>gi|205822400|sp|Q030C8|MNMA_LACLS RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 376
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+ ++ SGG DSS ++ V +
Sbjct: 1 MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 38
>gi|169334729|ref|ZP_02861922.1| hypothetical protein ANASTE_01135 [Anaerofustis stercorihominis
DSM 17244]
gi|169257467|gb|EDS71433.1| hypothetical protein ANASTE_01135 [Anaerofustis stercorihominis
DSM 17244]
Length = 354
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 9/24 (37%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETL 38
SGG DS+ + V L
Sbjct: 1 MSGGVDSTVSAYLLKKQGYDVIGL 24
>gi|168239141|ref|ZP_02664199.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194738212|ref|YP_002114241.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194713714|gb|ACF92935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197288113|gb|EDY27500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 368
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +VE L
Sbjct: 1 MSENPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|327467648|gb|EGF13145.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK330]
Length = 373
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|322391188|ref|ZP_08064660.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus peroris ATCC 700780]
gi|321145941|gb|EFX41330.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus peroris ATCC 700780]
Length = 453
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 81 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 116
>gi|290559145|gb|EFD92507.1| asparagine synthase [Candidatus Parvarchaeum acidophilus ARMAN-5]
gi|326422520|gb|EGD71916.1| Asparagine synthase [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
Length = 300
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++D I K +L SGG DSS A F +++ +S
Sbjct: 61 LSDYIIKNKPDCVLVSGGIDSSILAVIAKKEFKKIKLVS 99
>gi|288932827|ref|YP_003436887.1| asparagine synthase [Ferroglobus placidus DSM 10642]
gi|288895075|gb|ADC66612.1| asparagine synthase [Ferroglobus placidus DSM 10642]
Length = 265
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
S ++ FSGG DSST A + V ++ E+ + +++
Sbjct: 17 ESVVVAFSGGVDSSTLAGLA-NELTEVLAVTIISPTTPSREIRDAERIAREL 67
>gi|221202286|ref|ZP_03575320.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia multivorans CGD2M]
gi|221209100|ref|ZP_03582094.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia multivorans CGD2]
gi|221171004|gb|EEE03457.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia multivorans CGD2]
gi|221177860|gb|EEE10273.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia multivorans CGD2M]
Length = 381
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|221214491|ref|ZP_03587462.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia multivorans CGD1]
gi|221165748|gb|EED98223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia multivorans CGD1]
Length = 381
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|217968149|ref|YP_002353655.1| PP-loop domain protein [Dictyoglomus turgidum DSM 6724]
gi|217337248|gb|ACK43041.1| PP-loop domain protein [Dictyoglomus turgidum DSM 6724]
Length = 268
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ ++ ++ +SGG DS+ L A D D V ++ ++ +
Sbjct: 10 NFLRDCKKVVVAYSGGVDSTFLLKVAKDTLGDNVLAVTL-----------ISPIFPEREI 58
Query: 62 ELMPKWKDSLGEDHIL 77
+ + + LG HI+
Sbjct: 59 KEAKRIAEELGVRHII 74
>gi|254464002|ref|ZP_05077413.1| argininosuccinate synthase [Rhodobacterales bacterium Y4I]
gi|206684910|gb|EDZ45392.1| argininosuccinate synthase [Rhodobacterales bacterium Y4I]
Length = 408
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAEML 55
>gi|205829101|sp|B2IRK2|MNMA_STRPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 373
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|187735066|ref|YP_001877178.1| Argininosuccinate synthase [Akkermansia muciniphila ATCC BAA-835]
gi|187425118|gb|ACD04397.1| Argininosuccinate synthase [Akkermansia muciniphila ATCC BAA-835]
Length = 430
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 20/130 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELMPKW 67
++ +SGG D+S L W +++ + D GQ +++ LE + +
Sbjct: 2 KIVVAYSGGLDTSVLLKWLKEKYNAEIIAYCADVGQAEELDGLEAKALATGASKCFIGDL 61
Query: 68 KDSLGEDHILPLAILGDI--SHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
K+ ++I P+ + L ++A ++ + LA R
Sbjct: 62 KEDFATNYIFPMIQANALYEGRYLLGTSIARPCISKDMVD----------------LAIR 105
Query: 126 LGITNIVIGV 135
G I G
Sbjct: 106 EGADAIAHGA 115
>gi|147676587|ref|YP_001210802.1| ATP-utilizing enzymes [Pelotomaculum thermopropionicum SI]
gi|146272684|dbj|BAF58433.1| ATP-utilizing enzymes [Pelotomaculum thermopropionicum SI]
Length = 269
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 66/194 (34%), Gaps = 45/194 (23%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDR-VETLSFD---YGQRNKVELECRLCVRK 58
+IIK S L+ FSGG DS+ L A+D ++ Y E E + +
Sbjct: 13 EIIKSYGSVLVAFSGGVDSTFVLKAAVDALKEKAVAVTITGELYPP---GETEEAARLAR 69
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ E I+ L + + +S + + N L
Sbjct: 70 FLGA----------EHIIIENRDLDNPTFASNPPDRCYHCKKNEY---------GEILKV 110
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLK 176
A G ++ G+ D S Y R IRA + VH+PL + L
Sbjct: 111 ----ARERGFNAVIDGLNADDLSDY---RPG-IRA---------GQELGVHSPLKDVGLT 153
Query: 177 KYETWKLAQDIGGQ 190
K E L+++ G
Sbjct: 154 KEEIRALSRNFGLP 167
>gi|85859756|ref|YP_461958.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
-methyltransferase / fibronectin/fibrinogen-binding
protein [Syntrophus aciditrophicus SB]
gi|85722847|gb|ABC77790.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
-methyltransferase / fibronectin/fibrinogen-binding
protein [Syntrophus aciditrophicus SB]
Length = 333
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 36/125 (28%), Gaps = 20/125 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ +FSGG DS + D+ V L+F + R ++ K
Sbjct: 12 KGIAVFSGGLDSIIAVKVIQDQGIEVVGLTF------ETPFFSSRKARDAARKIGLPLKV 65
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ L + + KN+ I + + L A LG
Sbjct: 66 LDITEEHLKMLMNPRYG---YGKNLNPCIDCH-----------TLMLKIAGDKMSELGAD 111
Query: 130 NIVIG 134
I G
Sbjct: 112 FIFTG 116
>gi|88705811|ref|ZP_01103520.1| tRNA(Ile)-lysidine synthase [Congregibacter litoralis KT71]
gi|88699882|gb|EAQ96992.1| tRNA(Ile)-lysidine synthase [Congregibacter litoralis KT71]
Length = 422
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 13 LLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK 58
+ +SGG DS+ L A DR+ L + + ++ E R
Sbjct: 20 VAYSGGLDSTVLLHAAHKTCPDRLVALHAN----HGLQAEARRWQAH 62
>gi|316964494|gb|EFV49574.1| GMP synthase (glutamine-hydrolyzing) [Trichinella spiralis]
Length = 469
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALD 30
K L+L SGG DS+ C
Sbjct: 241 KDKKVLILCSGGVDSTVCAVLLRK 264
>gi|294775258|ref|ZP_06740781.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Bacteroides vulgatus PC510]
gi|294450835|gb|EFG19312.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Bacteroides vulgatus PC510]
Length = 435
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
LL SGG DSS + L + + + ++G K E E + V K
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESEAVIEVFK 191
>gi|257068069|ref|YP_003154324.1| GMP synthase (glutamine-hydrolyzing) [Brachybacterium faecium DSM
4810]
gi|256558887|gb|ACU84734.1| GMP synthase (glutamine-hydrolyzing) [Brachybacterium faecium DSM
4810]
Length = 533
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG---QRNKVELECR 53
SA+ SGG DS+ + DR+ + ++G Q ++E
Sbjct: 221 SAICALSGGVDSAVAAALVQRAIGDRLTCVYVNHGLMRQDESAQIEKA 268
>gi|237709041|ref|ZP_04539522.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265755532|ref|ZP_06090153.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229457103|gb|EEO62824.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234138|gb|EEZ19731.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 435
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
LL SGG DSS + L + + + ++G K E E + V K
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESEAVIEVFK 191
>gi|254172767|ref|ZP_04879441.1| conserved hypothetical protein TIGR00289 [Thermococcus sp. AM4]
gi|214032923|gb|EEB73751.1| conserved hypothetical protein TIGR00289 [Thermococcus sp. AM4]
Length = 224
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL---------SFDYG--QRNKVELECRL 54
+L+SGG+DS+ L WAL + V+ L S+ Y + EL+ R
Sbjct: 5 VLYSGGKDSNYALYWALRQGFEVKYLVSMVSEREDSYMYHVPNIHLTELQARA 57
>gi|212692102|ref|ZP_03300230.1| hypothetical protein BACDOR_01597 [Bacteroides dorei DSM 17855]
gi|237724624|ref|ZP_04555105.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|212665494|gb|EEB26066.1| hypothetical protein BACDOR_01597 [Bacteroides dorei DSM 17855]
gi|229436819|gb|EEO46896.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 435
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
LL SGG DSS + L + + + ++G K E E + V K
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESEAVIEVFK 191
>gi|168492409|ref|ZP_02716552.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CDC0288-04]
gi|183573402|gb|EDT93930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CDC0288-04]
Length = 373
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|168483769|ref|ZP_02708721.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CDC1873-00]
gi|172042905|gb|EDT50951.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CDC1873-00]
gi|332203292|gb|EGJ17359.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae GA47368]
Length = 373
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|150006079|ref|YP_001300823.1| putative GMP synthase [Bacteroides vulgatus ATCC 8482]
gi|254883447|ref|ZP_05256157.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|319641766|ref|ZP_07996447.1| GMP synthase 2 [Bacteroides sp. 3_1_40A]
gi|149934503|gb|ABR41201.1| putative GMP synthase [Bacteroides vulgatus ATCC 8482]
gi|254836240|gb|EET16549.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|317386600|gb|EFV67498.1| GMP synthase 2 [Bacteroides sp. 3_1_40A]
Length = 435
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
LL SGG DSS + L + + + ++G K E E + V K
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESEAVIEVFK 191
>gi|73666857|ref|YP_302873.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase
[Ehrlichia canis str. Jake]
gi|123615064|sp|Q3YSN0|MNMA_EHRCJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|72393998|gb|AAZ68275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ehrlichia canis str. Jake]
Length = 367
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ + ++ SGG DSS + +V ++
Sbjct: 17 SSTTVVVAMSGGVDSSVAAALLHKLGYKVIGIT 49
>gi|302805751|ref|XP_002984626.1| hypothetical protein SELMODRAFT_120847 [Selaginella moellendorffii]
gi|300147608|gb|EFJ14271.1| hypothetical protein SELMODRAFT_120847 [Selaginella moellendorffii]
Length = 532
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 11 ALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYG 43
A+ SGG DS+ + DR+ + D G
Sbjct: 229 AICALSGGVDSTVAATIVHKVMGDRLHCVFVDNG 262
>gi|168487074|ref|ZP_02711582.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CDC1087-00]
gi|183570004|gb|EDT90532.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CDC1087-00]
gi|332202053|gb|EGJ16122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae GA41317]
Length = 373
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|16082407|ref|NP_394892.1| 3-methyl-2-oxobutanoate dehydrogenase alpha chain precursor
[Thermoplasma acidophilum DSM 1728]
gi|10640780|emb|CAC12558.1| probable 3-methyl-2-oxobutanoate dehydrogenase alpha chain
precursor [Thermoplasma acidophilum]
Length = 337
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 18/124 (14%)
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP---GRNIIFLVFAATLA--YRLGITNI 131
+ I+G+ S+ + + + VP N+ L A A YR +
Sbjct: 85 IFDQIMGNAEDSAKGRQMPSHYSAKEINFMSVPSPVATNLP-LAVGAAYAKKYRKQEGIV 143
Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAI-------NLGMESHVTVHTPLMWLKKYETWKLA 184
+ + S D A+ A L + + P+ K E +K A
Sbjct: 144 ITTFGDGGTS-----TPDFHAAMNFAAVFDLPVVFLCENNGWAISLPVEKQTKAEIYKKA 198
Query: 185 QDIG 188
+ G
Sbjct: 199 EAYG 202
>gi|125972703|ref|YP_001036613.1| argininosuccinate synthase [Clostridium thermocellum ATCC 27405]
gi|256004862|ref|ZP_05429836.1| argininosuccinate synthase [Clostridium thermocellum DSM 2360]
gi|281416891|ref|ZP_06247911.1| argininosuccinate synthase [Clostridium thermocellum JW20]
gi|171769984|sp|A3DBU1|ASSY_CLOTH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|125712928|gb|ABN51420.1| argininosuccinate synthase [Clostridium thermocellum ATCC 27405]
gi|255991172|gb|EEU01280.1| argininosuccinate synthase [Clostridium thermocellum DSM 2360]
gi|281408293|gb|EFB38551.1| argininosuccinate synthase [Clostridium thermocellum JW20]
gi|316941061|gb|ADU75095.1| argininosuccinate synthase [Clostridium thermocellum DSM 1313]
Length = 405
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ + +L +SGG D+S + W + + V ++ D GQ ++E ++ ++
Sbjct: 1 MSQKEKVILAYSGGLDTSIIIPWLKENYDYEVIAMAADVGQGEELEPLREKAIKTGASKI 60
Query: 64 MPKWKDSLGEDHILPLAI 81
+ + L E+ +
Sbjct: 61 ---YIEDLKEEFVTDFIF 75
>gi|320589915|gb|EFX02371.1| argininosuccinate synthase [Grosmannia clavigera kw1407]
Length = 414
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 16/82 (19%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K + L +SGG D+S L W L++ V + GQ E + K
Sbjct: 1 MSKGK--VCLAYSGGLDTSCILKWLLEQGYEVVCFLANVGQ----EEDWDAVKAK----- 49
Query: 64 MPKWKDSLGEDHILPLAILGDI 85
LG ++ + + +
Sbjct: 50 ----SAKLGASKMIIVDLCKEF 67
>gi|312961679|ref|ZP_07776177.1| tRNA-specific 2-thiouridylase [Pseudomonas fluorescens WH6]
gi|311283938|gb|EFQ62521.1| tRNA-specific 2-thiouridylase [Pseudomonas fluorescens WH6]
Length = 374
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS +++ VE L
Sbjct: 10 QKKRVIVGMSGGVDSSVSAVLLMEQGYEVEGL 41
>gi|257091757|ref|YP_003165398.1| LPS biosynthesis protein WbpG [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044281|gb|ACV33469.1| LPS biosynthesis protein WbpG [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 385
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 43/142 (30%), Gaps = 27/142 (19%)
Query: 12 LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
++ SGG DSS A +R R D G + + + + +
Sbjct: 77 IIGLSGGLDSSYAAHVAKERMGLRPLLFHVDAGWNTNQAVGNIEKLVDGLGLALYTEVIN 136
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
E L LA L +I D +LP + F A + I
Sbjct: 137 WEEMKDLQLAFLRS------------QIADQDLPQ------DAAFFSALYMFARKHRIKY 178
Query: 131 IVIGVC--------ETDYSGYP 144
++ G ++ GYP
Sbjct: 179 VITGANFSTECCREPEEWGGYP 200
>gi|225857998|ref|YP_002739508.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae
70585]
gi|254811463|sp|C1CAE7|MNMA_STRP7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|225721738|gb|ACO17592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae 70585]
Length = 373
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|254503440|ref|ZP_05115591.1| NAD synthase family [Labrenzia alexandrii DFL-11]
gi|222439511|gb|EEE46190.1| NAD synthase family [Labrenzia alexandrii DFL-11]
Length = 555
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 12 LLL-FSGGQDSSTCLSWALDRF--DRVE--TLSFDY 42
++L SGG DS+ C + A+D D+V L F Y
Sbjct: 290 VVLGLSGGIDSAVCAAMAVDALGADKVHSIMLPFRY 325
>gi|109094553|ref|XP_001111019.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
isoform 2 [Macaca mulatta]
Length = 422
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|28393249|gb|AAO42053.1| putative GMP synthase [Arabidopsis thaliana]
Length = 534
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
N + + SGG DS+ + DR+ + D G
Sbjct: 221 NKTVASDEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNG 263
>gi|42571981|ref|NP_974081.1| GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative [Arabidopsis thaliana]
gi|332196007|gb|AEE34128.1| GMP-synthase-C and glutamine amidotransferase domain-containing
protein [Arabidopsis thaliana]
Length = 434
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
N + + SGG DS+ + DR+ + D G
Sbjct: 221 NKTVASDEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNG 263
>gi|15222505|ref|NP_176553.1| GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative [Arabidopsis thaliana]
gi|12324937|gb|AAG52416.1|AC011622_4 GMP synthase; 61700-64653 [Arabidopsis thaliana]
gi|56381989|gb|AAV85713.1| At1g63660 [Arabidopsis thaliana]
gi|332196006|gb|AEE34127.1| GMP-synthase-C and glutamine amidotransferase domain-containing
protein [Arabidopsis thaliana]
Length = 534
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
N + + SGG DS+ + DR+ + D G
Sbjct: 221 NKTVASDEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNG 263
>gi|14520926|ref|NP_126401.1| hypothetical protein PAB1895 [Pyrococcus abyssi GE5]
gi|5458143|emb|CAB49632.1| 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS
reductase) [Pyrococcus abyssi GE5]
Length = 429
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+A++ +SGG+DS+ L A FD V +
Sbjct: 234 RNAIVPWSGGKDSTAALILARKVFDDVTAV 263
>gi|319940218|ref|ZP_08014571.1| tRNA(Ile)-lysidine synthase [Streptococcus anginosus 1_2_62CV]
gi|319810689|gb|EFW07019.1| tRNA(Ile)-lysidine synthase [Streptococcus anginosus 1_2_62CV]
Length = 425
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKV--ELECRLCVRKK 59
+ LL SGG DS T L W + ++G R + E E + KK
Sbjct: 17 RHHRKVLLAISGGLDSMTLLDWLYKYRKKLEIEIYLAHVNHGVREESDFEEEKLKKIAKK 76
Query: 60 I 60
+
Sbjct: 77 L 77
>gi|313884882|ref|ZP_07818634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eremococcus coleocola ACS-139-V-Col8]
gi|312619573|gb|EFR31010.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Eremococcus coleocola ACS-139-V-Col8]
Length = 374
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ +K ++ SGG DSS + V L
Sbjct: 1 MTEKKARVIVGMSGGVDSSVAALLLKEAGYDVIGL 35
>gi|300934617|ref|ZP_07149873.1| cell cycle protein MesJ [Corynebacterium resistens DSM 45100]
Length = 344
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ SGG DS L A+ V + D+G ++ E + R++ +L +
Sbjct: 2 VVGLSGGADSLALLIVAIRFGMEVHAVIVDHGLQDGSE-QVAETARQQAEDLGAASARVI 60
Query: 72 GEDHILP 78
Sbjct: 61 AVQCRAD 67
>gi|149184375|ref|ZP_01862693.1| argininosuccinate synthase [Erythrobacter sp. SD-21]
gi|148831695|gb|EDL50128.1| argininosuccinate synthase [Erythrobacter sp. SD-21]
Length = 404
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S W + R V T + D GQ ++E R R +
Sbjct: 1 MSDIKRVVLAYSGGLDTSVIAKWLEVGRGLEVVTFTADLGQGEEIE-PAREKARAMGIPD 59
Query: 64 MPKWKDSLGEDHILP 78
+ + L E+ +
Sbjct: 60 EHIFIEDLREEFVRD 74
>gi|116516757|ref|YP_815643.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae D39]
gi|30173410|sp|Q8CWW0|MNMA_STRR6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|122279467|sp|Q04MV1|MNMA_STRP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|116077333|gb|ABJ55053.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae D39]
Length = 373
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|15900060|ref|NP_344664.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae
TIGR4]
gi|111656982|ref|ZP_01407790.1| hypothetical protein SpneT_02001784 [Streptococcus pneumoniae
TIGR4]
gi|225860166|ref|YP_002741675.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae
Taiwan19F-14]
gi|298229174|ref|ZP_06962855.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255779|ref|ZP_06979365.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298501928|ref|YP_003723868.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae TCH8431/19A]
gi|24638327|sp|Q97T38|MNMA_STRPN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|254811468|sp|C1CP03|MNMA_STRZT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|14971585|gb|AAK74304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae TIGR4]
gi|225726555|gb|ACO22406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae Taiwan19F-14]
gi|298237523|gb|ADI68654.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae TCH8431/19A]
gi|327390539|gb|EGE88879.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae GA04375]
Length = 373
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|319952511|ref|YP_004163778.1| argininosuccinate synthase [Cellulophaga algicola DSM 14237]
gi|319421171|gb|ADV48280.1| argininosuccinate synthase [Cellulophaga algicola DSM 14237]
Length = 395
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 16/129 (12%)
Query: 9 PSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S C + D+ V +S + G +K E+ ++ K
Sbjct: 2 KKLVLAYSGGLDTSYCAKHLSKDKGFEVHAVSVNTGGFSKEEISQIEKKSLELGATSYKS 61
Query: 68 KDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
D++ D ++ I G++ + T +++ + V N A +
Sbjct: 62 IDAVQTFYDKVVKYLIFGNVLKN-NTYPLSVSAERIVQAIEIV---N---------YAKK 108
Query: 126 LGITNIVIG 134
+ I G
Sbjct: 109 VDAKYIAHG 117
>gi|307327693|ref|ZP_07606877.1| GMP synthase, large subunit [Streptomyces violaceusniger Tu 4113]
gi|306886591|gb|EFN17593.1| GMP synthase, large subunit [Streptomyces violaceusniger Tu 4113]
Length = 565
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE-------CRLCVRKK 59
A+ SGG DS+ + D++ + D+G K E E V+ K
Sbjct: 260 TKRAICGLSGGVDSAVAAALVQKAIGDQLTCVYVDHGLMRKGESEQVEKDFVAATGVQLK 319
Query: 60 IVELMPKWKDSLG 72
+VE ++ +L
Sbjct: 320 VVEAEERFLSALA 332
>gi|254415346|ref|ZP_05029107.1| Asparagine synthase family [Microcoleus chthonoplastes PCC 7420]
gi|196177821|gb|EDX72824.1| Asparagine synthase family [Microcoleus chthonoplastes PCC 7420]
Length = 571
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 11/69 (15%)
Query: 13 LLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ SGG DSS + A V T S +G ELE V
Sbjct: 247 VYLSGGLDSSCITALAAKFHQHPVHTYSIHFGADCPNELEFSNLVAHHCH---------- 296
Query: 72 GEDHILPLA 80
+ HIL +
Sbjct: 297 TQHHILEIT 305
>gi|78044946|ref|YP_361069.1| argininosuccinate synthase [Carboxydothermus hydrogenoformans
Z-2901]
gi|119361261|sp|Q3A9W5|ASSY_CARHZ RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|77997061|gb|ABB15960.1| argininosuccinate synthase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 401
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-M 64
A +L +SGG D+S + W + + V + D GQ ++E ++ ++ +
Sbjct: 1 MAEKVVLAYSGGLDTSIIIPWLKENYGYEVIAMVADVGQGEELEPLREKAIKSGAAKIYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
K+ D + P+ G + + ++
Sbjct: 61 EDVKEEFVRDFVFPMLKAGAVYENKYLLGTSVA 93
>gi|325479587|gb|EGC82683.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 387
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 58/186 (31%), Gaps = 29/186 (15%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK--IVELMPKWKDSLGEDHI 76
DS R + + F + + +K + +++ K+ + I
Sbjct: 187 IDSPVAGFMMAKRGMNINAIHF-----HSYPFTSKRAHQKAMDLAKILSKYTGKMTVYSI 241
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
I IS + + + + + A+ ++ + ++ G
Sbjct: 242 NLAEIYKAISKNCPRRETTILSRR-------------FMMRIASKISEKYEYQALITGES 288
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
+ TI ++ + S + PL+ + K + ++++ IG +
Sbjct: 289 LGQVAS------QTIESMSV---INESSKYPILRPLIAMDKKDIIEISEKIGSYEKAIEP 339
Query: 197 LEESHT 202
++ +
Sbjct: 340 YDDCCS 345
>gi|300932931|ref|ZP_07148187.1| GMP synthase [Corynebacterium resistens DSM 45100]
Length = 530
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 8/106 (7%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
+ + + A+ SGG DS+ + DR+ + D+G + E E
Sbjct: 219 VREQVGPEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRQGEREQVEK---- 274
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+ + L H A L ++ + + I + +
Sbjct: 275 --DFVAATGAKLVTAHEKD-AFLKKLAGVTEPEAKRKAIGAEFIRS 317
>gi|258590908|emb|CBE67203.1| Argininosuccinate synthase (Citrulline--aspartate ligase) [NC10
bacterium 'Dutch sediment']
Length = 410
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
++K +L +SGG D+S L W ++ + V D GQ
Sbjct: 1 MQKVKKIVLAYSGGLDTSVILRWLIETYQAEVIAFCADLGQ 41
>gi|229591246|ref|YP_002873365.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas fluorescens
SBW25]
gi|259495834|sp|C3JY68|MNMA_PSEFS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|229363112|emb|CAY50124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas fluorescens SBW25]
Length = 374
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS +++ VE L
Sbjct: 10 QKKRVIVGMSGGVDSSVSAVLLMEQGYEVEGL 41
>gi|212224396|ref|YP_002307632.1| ATP-binding protein [Thermococcus onnurineus NA1]
gi|212009353|gb|ACJ16735.1| ATP-binding protein [Thermococcus onnurineus NA1]
Length = 225
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRV 35
+L+SGG+DS+ L WAL + V
Sbjct: 5 VLYSGGKDSNYALYWALKQGFEV 27
>gi|198274021|ref|ZP_03206553.1| hypothetical protein BACPLE_00158 [Bacteroides plebeius DSM
17135]
gi|198273099|gb|EDY97368.1| hypothetical protein BACPLE_00158 [Bacteroides plebeius DSM
17135]
Length = 375
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 15/85 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL---------SFDYG--QRNKV---- 48
+ ++ L+ SGG DSS ++ V + F G Q N+V
Sbjct: 1 MKEREKRVLVGMSGGIDSSAACIMLQEQGYEVVGVTMRTWDVASHFTPGNDQPNEVIEAQ 60
Query: 49 ELECRLCVRKKIVELMPKWKDSLGE 73
EL RL + + ++ +++ + +
Sbjct: 61 ELAARLGIEHHVADVRTEFRQVIVQ 85
>gi|161525855|ref|YP_001580867.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia multivorans ATCC
17616]
gi|189349424|ref|YP_001945052.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia multivorans ATCC
17616]
gi|205811411|sp|A9AH63|MNMA_BURM1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|160343284|gb|ABX16370.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia multivorans ATCC 17616]
gi|189333446|dbj|BAG42516.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Burkholderia multivorans ATCC 17616]
Length = 381
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|149010994|ref|ZP_01832299.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP19-BS75]
gi|147764630|gb|EDK71560.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP19-BS75]
Length = 373
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|126734425|ref|ZP_01750172.1| argininosuccinate synthase [Roseobacter sp. CCS2]
gi|126717291|gb|EBA14155.1| argininosuccinate synthase [Roseobacter sp. CCS2]
Length = 404
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MTAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAEMMGA 57
>gi|121602703|ref|YP_989608.1| argininosuccinate synthase [Bartonella bacilliformis KC583]
gi|166219947|sp|A1UUF5|ASSY_BARBK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|120614880|gb|ABM45481.1| argininosuccinate synthase [Bartonella bacilliformis KC583]
Length = 407
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S L W V T + D GQ ELE + I+ + +
Sbjct: 8 KKVVLAYSGGLDTSIILKWLQSELGAEVVTFTADLGQ--GEELESARRKAE-IMGIKEIY 64
Query: 68 KDSLGEDHILP 78
+ L E+ +
Sbjct: 65 IEDLREEFVRD 75
>gi|299822830|ref|ZP_07054716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria grayi DSM 20601]
gi|299816359|gb|EFI83597.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Listeria grayi DSM 20601]
Length = 370
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V +
Sbjct: 8 RVVVGMSGGVDSSVTAYLLKQQGYDVVGI 36
>gi|167895830|ref|ZP_02483232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 7894]
Length = 339
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|119478303|ref|ZP_01618334.1| argininosuccinate synthase [marine gamma proteobacterium
HTCC2143]
gi|119448643|gb|EAW29888.1| argininosuccinate synthase [marine gamma proteobacterium
HTCC2143]
Length = 406
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W D + V T + D GQ +VE + + E+
Sbjct: 1 MSDIKKVVLAYSGGLDTSVIVRWLQDTYQCEVVTFTADIGQGEEVEPARKKAEALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ K+ D + P+ I ++
Sbjct: 61 YIDDLKEEFVRDFVFPMFRANTIYEGEYLLGTSIA 95
>gi|172059678|ref|YP_001807330.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia ambifaria
MC40-6]
gi|205811349|sp|B1YTE9|MNMA_BURA4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|171992195|gb|ACB63114.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia ambifaria MC40-6]
Length = 389
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|169772959|ref|XP_001820948.1| argininosuccinate synthase [Aspergillus oryzae RIB40]
gi|238490888|ref|XP_002376681.1| argininosuccinate synthase [Aspergillus flavus NRRL3357]
gi|83768809|dbj|BAE58946.1| unnamed protein product [Aspergillus oryzae]
gi|220697094|gb|EED53435.1| argininosuccinate synthase [Aspergillus flavus NRRL3357]
Length = 417
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKI 60
+ + L +SGG D+S L W ++ V + GQ VE + KK+
Sbjct: 1 MATEKPRVCLAYSGGLDTSCILRWLIEEGYEVVCFLGNVGQEEDWAAVEEKALKIGAKKM 60
Query: 61 V 61
V
Sbjct: 61 V 61
>gi|329121788|ref|ZP_08250404.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dialister micraerophilus DSM 19965]
gi|327468061|gb|EGF13549.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dialister micraerophilus DSM 19965]
Length = 352
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQ--RNKVELECRLCVRKKIVE 62
+ SGG DS+ + + V + FD GQ + E+ L ++ +++
Sbjct: 6 RKRVIAAMSGGVDSTLTVRLLQEAGYEVFGATMQLFD-GQNLNDAKEMAKFLGIKHAVID 64
Query: 63 LMPKWKDSLGE 73
+ +K + E
Sbjct: 65 IRELYKKIVLE 75
>gi|322378091|ref|ZP_08052577.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. M334]
gi|321280928|gb|EFX57942.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. M334]
Length = 391
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 19 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 54
>gi|313892248|ref|ZP_07825841.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dialister microaerophilus UPII 345-E]
gi|313119386|gb|EFR42585.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Dialister microaerophilus UPII 345-E]
Length = 352
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQR--NKVELECRLCVRKKIVE 62
+ SGG DS+ + + V + FD GQ + E+ L ++ +++
Sbjct: 6 RKRVIAAMSGGVDSTLTVRLLQEAGYEVFGATMQLFD-GQNLDDAKEMAKFLGIKHAVID 64
Query: 63 LMPKWKDSLGE 73
+ +K + E
Sbjct: 65 IRELYKKIVLE 75
>gi|312966389|ref|ZP_07780611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 2362-75]
gi|312288842|gb|EFR16740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Escherichia coli 2362-75]
Length = 368
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + A ++ SGG DSS + +VE L
Sbjct: 1 MSETAKKVIVGISGGVDSSVSAWLLQQQGYQVEGL 35
>gi|304407460|ref|ZP_07389112.1| asparagine synthase (glutamine-hydrolyzing) [Paenibacillus
curdlanolyticus YK9]
gi|304343411|gb|EFM09253.1| asparagine synthase (glutamine-hydrolyzing) [Paenibacillus
curdlanolyticus YK9]
Length = 616
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 14 LFSGGQDSSTCLSWALDRFD-----RVETLSFDY 42
L SGG DSS + A+ + + T S DY
Sbjct: 265 LLSGGLDSSALTALAVKYYQGTGQGNIHTFSVDY 298
>gi|303255169|ref|ZP_07341245.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae BS455]
gi|303259175|ref|ZP_07345153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP-BS293]
gi|303263258|ref|ZP_07349181.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae BS397]
gi|303265423|ref|ZP_07351323.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae BS457]
gi|302597999|gb|EFL65069.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae BS455]
gi|302639593|gb|EFL70050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP-BS293]
gi|302644863|gb|EFL75110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae BS457]
gi|302647031|gb|EFL77255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae BS397]
Length = 373
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|303260932|ref|ZP_07346881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP14-BS292]
gi|303269624|ref|ZP_07355383.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae BS458]
gi|301801084|emb|CBW33752.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae INV200]
gi|302637769|gb|EFL68255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP14-BS292]
gi|302640826|gb|EFL71214.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae BS458]
gi|332077431|gb|EGI87892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae GA41301]
Length = 373
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|288937030|ref|YP_003441089.1| tRNA(Ile)-lysidine synthetase [Klebsiella variicola At-22]
gi|290512451|ref|ZP_06551817.1| cell cycle protein MesJ [Klebsiella sp. 1_1_55]
gi|288891739|gb|ADC60057.1| tRNA(Ile)-lysidine synthetase [Klebsiella variicola At-22]
gi|289774792|gb|EFD82794.1| cell cycle protein MesJ [Klebsiella sp. 1_1_55]
Length = 437
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 10/70 (14%)
Query: 12 LLLFSGGQDSSTCLSW--ALDRFD---RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ FSGG DS+ L L D + + + + V ++ +
Sbjct: 20 LVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHV----HHGLSAHADDWVAH-CRQICQQ 74
Query: 67 WKDSLGEDHI 76
W+ L H+
Sbjct: 75 WQVPLVVHHV 84
>gi|261880130|ref|ZP_06006557.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prevotella bergensis DSM 17361]
gi|270333185|gb|EFA43971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prevotella bergensis DSM 17361]
Length = 384
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 18/52 (34%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
MN K +L SGG DSS + + G K E +C
Sbjct: 1 MNIEELKDKRIAVLLSGGVDSSVVVYELASHGLHPDCFYIRIGPEEKEEWDC 52
>gi|251779527|ref|ZP_04822447.1| argininosuccinate synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243083842|gb|EES49732.1| argininosuccinate synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 330
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS ++ V + F
Sbjct: 3 KALAMISGGLDSILAAKLIKEQGIEVIGICF 33
>gi|261855295|ref|YP_003262578.1| argininosuccinate synthase [Halothiobacillus neapolitanus c2]
gi|261835764|gb|ACX95531.1| argininosuccinate synthase [Halothiobacillus neapolitanus c2]
Length = 408
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
+L +SGG D+S L W D + V T + D GQ ELE +K+ +
Sbjct: 8 KKVVLAYSGGLDTSVILKWLEDTYGCEVVTFTADLGQ--GDELEPARIKAQKMGVKQIFI 65
Query: 65 PKWKDSLGEDHILPL 79
++ D++ P+
Sbjct: 66 EDLREEFIRDYVFPM 80
>gi|121292051|gb|ABM53644.1| amidotransferase [Escherichia coli]
gi|121292077|gb|ABM53656.1| amidotransferase [Escherichia coli]
Length = 378
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 44/143 (30%), Gaps = 26/143 (18%)
Query: 1 MNDIIKKAPS-----ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRL 54
M++ IKK ++ SGG DSS A ++ R D G +
Sbjct: 54 MSESIKKDSKGSDFDCIIGLSGGLDSSYAAYIAKEKMGLRPLLFHVDAGWNTDQAVGNIE 113
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGD-ISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
+ + + + + E L L+ L I L ++ A
Sbjct: 114 KLIEGLGLDLYTEVINWEEMKDLQLSFLKSGIPDQDLVQDAA------------------ 155
Query: 114 IFLVFAATLAYRLGITNIVIGVC 136
F A + I +++ G
Sbjct: 156 -FFSSLYKFARKHKIKHVITGSN 177
>gi|206578043|ref|YP_002240324.1| tRNA(Ile)-lysidine synthase [Klebsiella pneumoniae 342]
gi|206567101|gb|ACI08877.1| tRNA(Ile)-lysidine synthase [Klebsiella pneumoniae 342]
Length = 437
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 10/70 (14%)
Query: 12 LLLFSGGQDSSTCLSW--ALDRFD---RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ FSGG DS+ L L D + + + + V ++ +
Sbjct: 20 LVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHV----HHGLSAHADDWVAH-CRQICQQ 74
Query: 67 WKDSLGEDHI 76
W+ L H+
Sbjct: 75 WQVPLVVHHV 84
>gi|206561667|ref|YP_002232432.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia cenocepacia
J2315]
gi|229486335|sp|B4EE50|MNMA_BURCJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|198037709|emb|CAR53652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia cenocepacia J2315]
Length = 391
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|261405437|ref|YP_003241678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paenibacillus sp. Y412MC10]
gi|261281900|gb|ACX63871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paenibacillus sp. Y412MC10]
Length = 375
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS + V +
Sbjct: 11 KHNTRIVVGMSGGVDSSVTALLLKQQGYEVIGI 43
>gi|188589825|ref|YP_001919873.1| argininosuccinate synthase [Clostridium botulinum E3 str. Alaska
E43]
gi|188500106|gb|ACD53242.1| argininosuccinate synthase [Clostridium botulinum E3 str. Alaska
E43]
Length = 330
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS ++ V + F
Sbjct: 3 KALAMISGGLDSILAAKLIKEQGIEVIGICF 33
>gi|187935593|ref|YP_001884686.1| argininosuccinate synthase [Clostridium botulinum B str. Eklund
17B]
gi|187723746|gb|ACD24967.1| argininosuccinate synthase [Clostridium botulinum B str. Eklund
17B]
Length = 330
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS ++ V + F
Sbjct: 3 KALAMISGGLDSILAAKLIKEQGIEVIGICF 33
>gi|154687066|ref|YP_001422227.1| argininosuccinate synthase [Bacillus amyloliquefaciens FZB42]
gi|166219946|sp|A7Z7M0|ASSY_BACA2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|154352917|gb|ABS74996.1| ArgG [Bacillus amyloliquefaciens FZB42]
Length = 403
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W ++ V D G
Sbjct: 1 MAEQKKVVLAYSGGLDTSVAIKWLQEQGYDVVACCLDVG 39
>gi|148983522|ref|ZP_01816841.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP3-BS71]
gi|221231050|ref|YP_002510202.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae ATCC 700669]
gi|254811464|sp|B8ZK04|MNMA_STRPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|147923669|gb|EDK74781.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP3-BS71]
gi|220673510|emb|CAR67990.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae ATCC 700669]
gi|301799298|emb|CBW31824.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae OXC141]
Length = 373
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|149005874|ref|ZP_01829603.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP18-BS74]
gi|225855906|ref|YP_002737417.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae
P1031]
gi|237649790|ref|ZP_04524042.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CCRI 1974]
gi|237821488|ref|ZP_04597333.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CCRI 1974M2]
gi|307126353|ref|YP_003878384.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae 670-6B]
gi|254811467|sp|C1CI29|MNMA_STRZP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|147762230|gb|EDK69191.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP18-BS74]
gi|225725914|gb|ACO21766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae P1031]
gi|306483415|gb|ADM90284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae 670-6B]
Length = 373
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|170732018|ref|YP_001763965.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia cenocepacia
MC0-3]
gi|205811368|sp|B1JVW3|MNMA_BURCC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|169815260|gb|ACA89843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia cenocepacia MC0-3]
Length = 391
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|115526688|ref|YP_783599.1| tRNA(Ile)-lysidine synthetase-like [Rhodopseudomonas palustris
BisA53]
gi|115520635|gb|ABJ08619.1| tRNA(Ile)-lysidine synthetase [Rhodopseudomonas palustris BisA53]
Length = 343
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSW------ALDRFDRVETLSFDYGQRNKVELECR 53
K P+ +L SGG DS + AL R + ++ D+G R E R
Sbjct: 23 KIPAIVLAVSGGPDSLALMVLAARWRAALKRGPELIAVTIDHGLREASAREAR 75
>gi|107021774|ref|YP_620101.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia cenocepacia AU
1054]
gi|116688721|ref|YP_834344.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia cenocepacia HI2424]
gi|123072405|sp|Q1BZ27|MNMA_BURCA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205811383|sp|A0K4M4|MNMA_BURCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|105891963|gb|ABF75128.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia cenocepacia AU 1054]
gi|116646810|gb|ABK07451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia cenocepacia HI2424]
Length = 391
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|301307418|ref|ZP_07213417.1| hypothetical protein HMPREF9347_05983 [Escherichia coli MS 124-1]
gi|300837406|gb|EFK65166.1| hypothetical protein HMPREF9347_05983 [Escherichia coli MS 124-1]
gi|315252382|gb|EFU32350.1| microcin J25-processing protein McjC [Escherichia coli MS 85-1]
Length = 128
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++++ LLFSGG DS+ + ++ F
Sbjct: 89 EMMRDNRKIALLFSGGLDSALIFHTLKESGNKFCAYHF 126
>gi|300905602|ref|ZP_07123351.1| conserved domain protein [Escherichia coli MS 84-1]
gi|300402554|gb|EFJ86092.1| conserved domain protein [Escherichia coli MS 84-1]
Length = 148
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++++ LLFSGG DS+ + ++ F
Sbjct: 109 EMMRDNRKIALLFSGGLDSALIFHTLKESGNKFCAYHF 146
>gi|291300554|ref|YP_003511832.1| argininosuccinate synthase [Stackebrandtia nassauensis DSM 44728]
gi|290569774|gb|ADD42739.1| argininosuccinate synthase [Stackebrandtia nassauensis DSM 44728]
Length = 402
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ 44
+L FSGG D+S + A V ++ D GQ
Sbjct: 1 MTERVVLAFSGGLDTSVAIPYLAEQTGGEVIAVAIDVGQ 39
>gi|296109050|ref|YP_003615999.1| subunit of tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Methanocaldococcus infernus ME]
gi|295433864|gb|ADG13035.1| subunit of tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Methanocaldococcus infernus ME]
Length = 197
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
LLFSGG+DSS V+ ++ ++G
Sbjct: 4 LLFSGGKDSSLAALILKKLGYDVKLITVNFG 34
>gi|254482585|ref|ZP_05095824.1| argininosuccinate synthase [marine gamma proteobacterium
HTCC2148]
gi|214037276|gb|EEB77944.1| argininosuccinate synthase [marine gamma proteobacterium
HTCC2148]
Length = 406
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W D + V T + D GQ +VE I E+
Sbjct: 1 MSDVNKVVLAYSGGLDTSVIVRWLQDTYNCEVVTFTADIGQGEEVEPARAKAEAMGIKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|194398405|ref|YP_002036838.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae G54]
gi|229487424|sp|B5E605|MNMA_STRP4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|194358072|gb|ACF56520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae G54]
Length = 373
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|148987860|ref|ZP_01819323.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP6-BS73]
gi|148992708|ref|ZP_01822351.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP9-BS68]
gi|149017799|ref|ZP_01834258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP23-BS72]
gi|168489391|ref|ZP_02713590.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP195]
gi|168493828|ref|ZP_02717971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CDC3059-06]
gi|147926324|gb|EDK77397.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP6-BS73]
gi|147928434|gb|EDK79449.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP9-BS68]
gi|147931363|gb|EDK82341.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP23-BS72]
gi|183572139|gb|EDT92667.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP195]
gi|183576137|gb|EDT96665.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae CDC3059-06]
gi|301793411|emb|CBW35778.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae INV104]
gi|332075800|gb|EGI86267.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae GA17570]
gi|332076573|gb|EGI87035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae GA17545]
gi|332204143|gb|EGJ18208.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae GA47901]
Length = 373
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|124004644|ref|ZP_01689488.1| asparagine synthase family [Microscilla marina ATCC 23134]
gi|123989767|gb|EAY29296.1| asparagine synthase family [Microscilla marina ATCC 23134]
Length = 563
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 13 LLFSGGQDSSTCLS-WALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
+ SGG DSS + A ++ T S +G++ + EL V ++
Sbjct: 225 VFLSGGLDSSILAARVAQLSSKKIHTYSIHFGKKYRNELHYAQKVAQR 272
>gi|119504389|ref|ZP_01626469.1| Argininosuccinate synthase [marine gamma proteobacterium
HTCC2080]
gi|119459897|gb|EAW40992.1| Argininosuccinate synthase [marine gamma proteobacterium
HTCC2080]
Length = 405
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+L +SGG D+S + W + +D V T + D GQ +VE I E+
Sbjct: 5 KVVLAYSGGLDTSVIVRWLQETYDCEVVTFTADIGQGEEVEPARAKAQALGIEEIY 60
>gi|160112811|sp|Q9X2V9|MCJC_ECOLX RecName: Full=Microcin J25-processing protein mcjC
gi|78322019|emb|CAJ40934.1| microcin J25 processing protein [Escherichia coli]
Length = 513
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++++ LLFSGG DS+ + ++ F
Sbjct: 186 EMMRDNRKIALLFSGGLDSALIFHTLKESGNKFCAYHF 223
>gi|4731434|gb|AAD28496.1|AF061787_3 McjC [Escherichia coli]
Length = 442
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
++++ LLFSGG DS+ + ++ F
Sbjct: 186 EMMRDNRKIALLFSGGLDSALIFHTLKESGNKFCAYHF 223
>gi|320353077|ref|YP_004194416.1| PP-loop domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320121579|gb|ADW17125.1| PP-loop domain protein [Desulfobulbus propionicus DSM 2032]
Length = 253
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 39/204 (19%)
Query: 1 MND--IIKKAPSALLLFSGGQDSSTCLSWALDR------FDRVETLSFDYGQRNKVELEC 52
M+D ++ L+ SGG DS + L +E + D + E E
Sbjct: 15 MHDYAMLADGDRVLVAVSGGMDSLVLVWLLLHWRKKAPIDYALEVVHVD----MEPEGEA 70
Query: 53 RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
+ +L+ ++ + L +L + +++ + + R
Sbjct: 71 PGAAAIQTADLVARFGVQVHIVPALWRPVLSGEGEDARGQDLCFQCARSR--------RT 122
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--------ES 164
+F A + G T I G D + + A N+
Sbjct: 123 QLF-----EHARQTGCTKIAFGHHRDDIV------ETFLLNLTCAGNISTMSPRQELFAG 171
Query: 165 HVTVHTPLMWLKKYETWKLAQDIG 188
+++ PL +L K E + ++G
Sbjct: 172 RLSLIRPLAYLDKSEIAAIGGELG 195
>gi|312136595|ref|YP_004003932.1| pp-loop domain protein [Methanothermus fervidus DSM 2088]
gi|311224314|gb|ADP77170.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
Length = 306
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 24/145 (16%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTC---LSWALDRF-DRVETLSFDYGQRNKVELECRLCV 56
+N +I+K L SGG+DS L+ +R +E L+ D G +N E
Sbjct: 41 LNKLIEKGDRVLAGVSGGKDSVAMLDILNILHERGIIELEVLTVDEGIKNYRE------- 93
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNII 114
K +E+ LG H + D +L + V+ ++ P T+ V R I
Sbjct: 94 --KTLEIAKYHTKRLGIPHHIVK--FKDCFGITLDEIVSSNVERG--PCTYCGV-FRRWI 146
Query: 115 FLVFAATLAYRLGITNIVIGVCETD 139
F +L I I D
Sbjct: 147 FNKIG----KKLEADKIAIAHNLDD 167
>gi|308174628|ref|YP_003921333.1| argininosuccinate synthase [Bacillus amyloliquefaciens DSM 7]
gi|307607492|emb|CBI43863.1| argininosuccinate synthase [Bacillus amyloliquefaciens DSM 7]
gi|328554554|gb|AEB25046.1| argininosuccinate synthase [Bacillus amyloliquefaciens TA208]
gi|328912958|gb|AEB64554.1| argininosuccinate synthase [Bacillus amyloliquefaciens LL3]
Length = 403
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W ++ V D G
Sbjct: 1 MAEQKKVVLAYSGGLDTSVAIKWLQEQGYDVVACCLDVG 39
>gi|300868121|ref|ZP_07112756.1| Argininosuccinate synthase [Oscillatoria sp. PCC 6506]
gi|300333895|emb|CBN57936.1| Argininosuccinate synthase [Oscillatoria sp. PCC 6506]
Length = 400
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +A +L +SGG D+S C+ + + + + V TL+ D GQ +++E +RKK
Sbjct: 1 MGRATKVVLAYSGGVDTSVCIPYLKNEWGVEEVITLAADLGQGDELE-----PIRKK--- 52
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII--FLVFAA 120
++ + + A + +N P + R +I LV A
Sbjct: 53 ---ALASGASISLVID-GTESFVKDCAFPAIQANALYENRYPLSTALARPLIAKMLVDA- 107
Query: 121 TLAYRLGITNIVIG 134
A + G I G
Sbjct: 108 --AEKYGADAIAHG 119
>gi|294792727|ref|ZP_06757874.1| argininosuccinate synthase [Veillonella sp. 6_1_27]
gi|294456626|gb|EFG24989.1| argininosuccinate synthase [Veillonella sp. 6_1_27]
Length = 403
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+ KA +L +SGG D+S + W + + V + D GQ
Sbjct: 1 MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41
>gi|282849809|ref|ZP_06259193.1| argininosuccinate synthase [Veillonella parvula ATCC 17745]
gi|282580746|gb|EFB86145.1| argininosuccinate synthase [Veillonella parvula ATCC 17745]
Length = 403
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+ KA +L +SGG D+S + W + + V + D GQ
Sbjct: 1 MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41
>gi|257126603|ref|YP_003164717.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
buccalis C-1013-b]
gi|257050542|gb|ACV39726.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
buccalis C-1013-b]
Length = 396
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+L SGG DS R R+ ++F + + +K+ EL
Sbjct: 185 KGLVLLSGGIDSPVASFMMAKRGMRLNFVTF-----HSFPFTSHQAL-EKVKELTDILSL 238
Query: 70 SLGEDHILPLAILG 83
+G+ + L IL
Sbjct: 239 YVGKTRLYSLNILK 252
>gi|269798624|ref|YP_003312524.1| argininosuccinate synthase [Veillonella parvula DSM 2008]
gi|294794479|ref|ZP_06759615.1| argininosuccinate synthase [Veillonella sp. 3_1_44]
gi|269095253|gb|ACZ25244.1| argininosuccinate synthase [Veillonella parvula DSM 2008]
gi|294454809|gb|EFG23182.1| argininosuccinate synthase [Veillonella sp. 3_1_44]
Length = 403
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+ KA +L +SGG D+S + W + + V + D GQ
Sbjct: 1 MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41
>gi|221636272|ref|YP_002524148.1| argininosuccinate synthase [Thermomicrobium roseum DSM 5159]
gi|221157288|gb|ACM06406.1| argininosuccinate synthase [Thermomicrobium roseum DSM 5159]
Length = 407
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
+ KK + ++L +SGG D+S L W + + V T++ D GQ
Sbjct: 1 MTKKRVNKVVLAYSGGLDTSVILKWIKETYGCEVITVTADVGQ 43
>gi|254246300|ref|ZP_04939621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia cenocepacia PC184]
gi|124871076|gb|EAY62792.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia cenocepacia PC184]
Length = 447
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 58 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 89
>gi|70606217|ref|YP_255087.1| PP-loop family protein [Sulfolobus acidocaldarius DSM 639]
gi|68566865|gb|AAY79794.1| pP-loop family protein [Sulfolobus acidocaldarius DSM 639]
Length = 315
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 13 LLFSGGQDSSTCLS----WALDRFDRVETLSFDYG 43
+ SGG+DS+T L A R + + G
Sbjct: 52 VAVSGGKDSTTLLHLMNKLAQKRGFEIVGIHIHLG 86
>gi|75055053|sp|Q5RB73|MTU1_PONAB RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1
gi|55728489|emb|CAH90987.1| hypothetical protein [Pongo abelii]
Length = 422
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|57241962|ref|ZP_00369902.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter upsaliensis RM3195]
gi|57017154|gb|EAL53935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter upsaliensis RM3195]
Length = 338
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 39/133 (29%), Gaps = 26/133 (19%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKW 67
L+ SGG DS+ V Y + + E + +K+ + +
Sbjct: 2 KILVAMSGGVDSTVTAYKLKKAGHEVIG---CYMKLHGKPGYHEENIAKVEKVAKFLQIP 58
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFA--AT 121
HIL L + + + ++ PN P R F+
Sbjct: 59 Y------HILDL---QEDFKAKVYMPFINTYKEGKTPN---PCALCNR---FIKLGKLLE 103
Query: 122 LAYRLGITNIVIG 134
A LG + G
Sbjct: 104 FAKNLGCEKLATG 116
>gi|331082801|ref|ZP_08331923.1| GMP synthase 2 [Lachnospiraceae bacterium 6_1_63FAA]
gi|330400130|gb|EGG79779.1| GMP synthase 2 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 430
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + + + + +
Sbjct: 136 KKVLLALSGGVDSSVVAAMLIKAIGQQLVCVHVNHGLMRKNESESVVKIFRDELHANLIY 195
Query: 68 KDS 70
D+
Sbjct: 196 VDA 198
>gi|329962135|ref|ZP_08300146.1| GMP synthase domain protein [Bacteroides fluxus YIT 12057]
gi|328530783|gb|EGF57641.1| GMP synthase domain protein [Bacteroides fluxus YIT 12057]
Length = 435
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
LL SGG DSS + L D++ + ++G K E E
Sbjct: 141 RKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESEA 185
>gi|323694670|ref|ZP_08108832.1| argininosuccinate synthase [Clostridium symbiosum WAL-14673]
gi|323501262|gb|EGB17162.1| argininosuccinate synthase [Clostridium symbiosum WAL-14673]
Length = 416
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK---VELECRLCVRKK 59
+ KK +L +SGG D+S + W + + V +S D GQ + +E + K
Sbjct: 1 MEKKYNKIVLAYSGGLDTSVLIPWLKENYGCEVVAVSADVGQGAELIGLEEKALKTGASK 60
Query: 60 IVELMPKWKDSLGEDHILP 78
+ + K +++I+P
Sbjct: 61 L--YIEDLKKEFVDEYIIP 77
>gi|315634589|ref|ZP_07889873.1| argininosuccinate synthase [Aggregatibacter segnis ATCC 33393]
gi|315476537|gb|EFU67285.1| argininosuccinate synthase [Aggregatibacter segnis ATCC 33393]
Length = 445
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + FSGG D+S L W + + GQ ++ + E K+ M
Sbjct: 9 LPKGEKVGIAFSGGLDTSAALLWMRQHGAIPCAYTANLGQPDEEDYEAIPRKAKEYGAEM 68
Query: 65 PKWKD 69
+ D
Sbjct: 69 ARLID 73
>gi|313246534|emb|CBY35432.1| unnamed protein product [Oikopleura dioica]
Length = 401
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
+ +L +SGG D+S L + + + RV D GQ E
Sbjct: 1 MPETVVLAYSGGLDTSCILVYLVKQGYRVVACIADVGQDEDFE 43
>gi|307264948|ref|ZP_07546509.1| argininosuccinate synthase [Thermoanaerobacter wiegelii Rt8.B1]
gi|326390048|ref|ZP_08211610.1| argininosuccinate synthase [Thermoanaerobacter ethanolicus JW
200]
gi|306919933|gb|EFN50146.1| argininosuccinate synthase [Thermoanaerobacter wiegelii Rt8.B1]
gi|325993913|gb|EGD52343.1| argininosuccinate synthase [Thermoanaerobacter ethanolicus JW
200]
Length = 410
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ----RNKVELECRLCVRKK 59
+ K +L +SGG D+S + W + ++ + D GQ ++ + K
Sbjct: 1 MLKGEKVVLAYSGGLDTSVIIPWLKENYECEIIAACIDVGQGEELKHIKDKALASGASKV 60
Query: 60 IVELMPKWKDSLGEDHILPLAILGDI 85
+E K+ +D+I P G +
Sbjct: 61 YIE---DVKEEFVKDYIFPTLKAGAV 83
>gi|297837025|ref|XP_002886394.1| hypothetical protein ARALYDRAFT_893078 [Arabidopsis lyrata subsp.
lyrata]
gi|297332235|gb|EFH62653.1| hypothetical protein ARALYDRAFT_893078 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
N + + SGG DS+ + DR+ + D G
Sbjct: 221 NQTVASDEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNG 263
>gi|262306067|gb|ACY45626.1| gln amidotransferase [Plathemis lydia]
Length = 196
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG-QRNKVELECRLCVRK 58
LLL SGG DS+ C + D++ T+ D G R ++ +RK
Sbjct: 47 LLLASGGVDSTVCAALLRKALPEDQLITVHIDNGFMRKNDRIDVEQTLRK 96
>gi|257458053|ref|ZP_05623212.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Treponema vincentii ATCC 35580]
gi|257444766|gb|EEV19850.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Treponema vincentii ATCC 35580]
Length = 358
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 5/64 (7%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWKDSLGE 73
SGG DS+ +++ V ++ R E ++I+ + LG
Sbjct: 7 LSGGVDSTVVAKLLMEQGHEVCGVTL----RVLNEKNPVAKEQSERIIGEAAQAARILGI 62
Query: 74 DHIL 77
H +
Sbjct: 63 PHRV 66
>gi|262196730|ref|YP_003267939.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Haliangium ochraceum DSM 14365]
gi|262080077|gb|ACY16046.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Haliangium ochraceum DSM 14365]
Length = 391
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 5/125 (4%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFD-Y-GQRNKVELECRLCVRKKIVELMPKWKD 69
+ SGG DS+ + +++ RV ++ Y + R C + I +
Sbjct: 8 VAALSGGVDSAVTAAMLVEQGHRVVGMTMRLYDASGTSASVGGRCCGPRDIEDARRVCAH 67
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+++ ++ + PN V I A LG
Sbjct: 68 LGIPFYVVN---FEVDFAHTVIDDFVDTYLAGETPNPCVKCNQHIKFTPLLARARALGAE 124
Query: 130 NIVIG 134
+ G
Sbjct: 125 TVATG 129
>gi|260587030|ref|ZP_05852943.1| GMP synthase domain protein [Blautia hansenii DSM 20583]
gi|260542520|gb|EEX23089.1| GMP synthase domain protein [Blautia hansenii DSM 20583]
Length = 430
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + + + + +
Sbjct: 136 KKVLLALSGGVDSSVVAAMLIKAIGQQLVCVHVNHGLMRKNESESVVKIFRDELHANLIY 195
Query: 68 KDS 70
D+
Sbjct: 196 VDA 198
>gi|213052788|ref|ZP_03345666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
Length = 374
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS + +VE L
Sbjct: 9 KAQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 41
>gi|160890962|ref|ZP_02071965.1| hypothetical protein BACUNI_03407 [Bacteroides uniformis ATCC 8492]
gi|270294277|ref|ZP_06200479.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317481491|ref|ZP_07940556.1| GMP synthase domain-containing protein [Bacteroides sp. 4_1_36]
gi|156859183|gb|EDO52614.1| hypothetical protein BACUNI_03407 [Bacteroides uniformis ATCC 8492]
gi|270275744|gb|EFA21604.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316902337|gb|EFV24226.1| GMP synthase domain-containing protein [Bacteroides sp. 4_1_36]
Length = 435
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
LL SGG DSS + L D++ + ++G K E E
Sbjct: 141 RKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESEA 185
>gi|254361531|ref|ZP_04977669.1| argininosuccinate synthase [Mannheimia haemolytica PHL213]
gi|261492156|ref|ZP_05988727.1| argininosuccinate synthase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495748|ref|ZP_05992190.1| argininosuccinate synthase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153093049|gb|EDN74065.1| argininosuccinate synthase [Mannheimia haemolytica PHL213]
gi|261308603|gb|EEY09864.1| argininosuccinate synthase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312229|gb|EEY13361.1| argininosuccinate synthase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 443
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 9/90 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ + + + KK +E + +
Sbjct: 19 FSGGLDTSAALLWMRKKGAVPYAYTANLGQ---PDEDDYNAIPKKAMEYGAENARLIDCR 75
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
L + I + I +P
Sbjct: 76 QQLAHEGIAAIQCGAF------HISTGGIP 99
>gi|149376379|ref|ZP_01894142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Marinobacter algicola DG893]
gi|149359393|gb|EDM47854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Marinobacter algicola DG893]
Length = 386
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ KAP ++ SGG DSS D+ +VE L
Sbjct: 1 MTKAPENTRVIVGMSGGVDSSVAAWLLKDQGYQVEGL 37
>gi|313889234|ref|ZP_07822888.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
harei ACS-146-V-Sch2b]
gi|312844788|gb|EFR32195.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
harei ACS-146-V-Sch2b]
Length = 393
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKWKDSLGEDHI 76
DS R V+ L F + E KK+ E + + L +
Sbjct: 188 IDSPVAGFLMAKRGVLVDCLHF-----HSYPFTSERAEEKVKKLAEDISNFSGELTFYSV 242
Query: 77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
L I +I+ + + + + + A +A G I+ G
Sbjct: 243 NILDIQKEININCPEDEMTIISRR-------------FMMRVADKIARDNGYDCIITGEN 289
Query: 137 ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
+ TI + + + V PL+ + K +A+DI + L
Sbjct: 290 LGQVAS------QTIDGL-KVTDAITDK--IVFRPLIGMDKVNIIDIAKDIDTYETSILP 340
Query: 197 LEES 200
E+
Sbjct: 341 YEDC 344
>gi|311694977|gb|ADP97850.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[marine bacterium HP15]
Length = 395
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS D+ +VE L
Sbjct: 9 SPNSNANTRVIVGMSGGVDSSVAAWLLKDQGYQVEGL 45
>gi|251771982|gb|EES52554.1| thiamine biosynthesis protein [Leptospirillum ferrodiazotrophum]
Length = 344
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 30/125 (24%), Gaps = 20/125 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+LL SGG DS+ + L + C E+
Sbjct: 3 KGVLLLSGGLDSTLSGLLLRRMGVELVALHL------ESPFGCDSMAETMAKEIGIPLVV 56
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ L + + S V R I + +G +
Sbjct: 57 RPKGEAFLDMLGHPRYGYGSAMNPC-------------VDCR-IHMFRMGRSFMEEVGAS 102
Query: 130 NIVIG 134
+V G
Sbjct: 103 FLVTG 107
>gi|209364581|ref|NP_001125570.1| mitochondrial tRNA-specific 2-thiouridylase 1 [Pongo abelii]
Length = 421
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|160931216|ref|ZP_02078618.1| hypothetical protein CLOLEP_00053 [Clostridium leptum DSM 753]
gi|156869771|gb|EDO63143.1| hypothetical protein CLOLEP_00053 [Clostridium leptum DSM 753]
Length = 357
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 11/104 (10%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-----DYGQRNKVELECRLCVRKKIV 61
+L SGG DSS L + V ++ Y E + C +
Sbjct: 1 MKKKVMLGMSGGVDSSVAALLLLQQGYDVTGVTMKLRPDQY----MAESQSGGCCSLDDI 56
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+ + LG +H++ + + A + PN
Sbjct: 57 DDARRVAYRLGIEHLV--LNFTQVFSEKVIDYFASEYLAGRTPN 98
>gi|118475009|ref|YP_892741.1| asparagine synthase (glutamine-hydrolyzing) [Campylobacter fetus
subsp. fetus 82-40]
gi|118414235|gb|ABK82655.1| asparagine synthase (glutamine-hydrolyzing) [Campylobacter fetus
subsp. fetus 82-40]
Length = 600
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV--ELMPKWKDSLG 72
SGG DSS + + +T+S + E + V K + + +
Sbjct: 254 LSGGLDSSVTATVLAKNGFKFKTISIGFESDKFNESDYAAAVAKNLGLEHINYTLTPKIA 313
Query: 73 EDHILPLAIL 82
+D IL L +
Sbjct: 314 KDIILQLPSV 323
>gi|186477293|ref|YP_001858763.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia phymatum STM815]
gi|205811492|sp|B2JGI9|MNMA_BURP8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|184193752|gb|ACC71717.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia phymatum STM815]
Length = 384
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKQRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|18978317|ref|NP_579674.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
furiosus DSM 3638]
gi|18894145|gb|AAL82069.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
3638]
Length = 204
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
LFSGG+DSS V+ ++ +G
Sbjct: 13 LFSGGKDSSLAAWILKKLGYEVKLITITFG 42
>gi|332359485|gb|EGJ37304.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis SK1056]
Length = 425
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVE---TL-SFDYGQRNKVELECRLCVRKKIV 61
+ L+ SGG DS T L +D + + ++ QR + E E + V KI
Sbjct: 17 QDHQKVLVAVSGGLDSMTLLQLLIDSQKELAIELAIAHVNHKQRPESEQEEKALV--KIA 74
Query: 62 ELMP 65
E +
Sbjct: 75 EQLG 78
>gi|331267205|ref|YP_004326835.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus oralis Uo5]
gi|326683877|emb|CBZ01495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus oralis Uo5]
Length = 373
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|322388413|ref|ZP_08062016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus infantis ATCC 700779]
gi|321140726|gb|EFX36228.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus infantis ATCC 700779]
Length = 373
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|307702622|ref|ZP_07639574.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus oralis ATCC 35037]
gi|307623738|gb|EFO02723.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus oralis ATCC 35037]
Length = 373
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|307711099|ref|ZP_07647521.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis SK321]
gi|307617061|gb|EFN96239.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis SK321]
Length = 373
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|307243659|ref|ZP_07525800.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptostreptococcus stomatis DSM 17678]
gi|306492969|gb|EFM64981.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Peptostreptococcus stomatis DSM 17678]
Length = 350
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 38/133 (28%), Gaps = 23/133 (17%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS-----FDYGQR-NKVELECRLCVRKKIVE 62
LL SGG DSS V + F G + +E +C + KI
Sbjct: 2 KRVLLGMSGGVDSSVAAFLLQKEGYEVVGATMALWDFKDGNKDTSIEDARVVCNKLKI-- 59
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN-IIFLVFAAT 121
+ H+L + + N + PN V N I
Sbjct: 60 ----------DHHVLD---FREDFKDLVVDNFIDEYFAGKTPNPCV-FCNKTIKFGLLFD 105
Query: 122 LAYRLGITNIVIG 134
A LG + G
Sbjct: 106 KARELGCDYVATG 118
>gi|291277585|ref|YP_003517357.1| argininosuccinate synthase [Helicobacter mustelae 12198]
gi|290964779|emb|CBG40635.1| argininosuccinate synthase [Helicobacter mustelae 12198]
Length = 401
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
A +L +SGG D+S L W + + V T + D GQ E+ KK+
Sbjct: 1 MAKKVVLAYSGGLDTSVILKWLGENYGCEVVTFTADIGQ--GEEVAPAREKAKKL 53
>gi|289168790|ref|YP_003447059.1| tRNA methyl transferase [Streptococcus mitis B6]
gi|288908357|emb|CBJ23199.1| tRNA methyl transferase [Streptococcus mitis B6]
Length = 373
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|270291927|ref|ZP_06198142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. M143]
gi|270279455|gb|EFA25297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. M143]
Length = 383
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 11 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 46
>gi|326204187|ref|ZP_08194047.1| asparagine synthase (glutamine-hydrolyzing) [Clostridium
papyrosolvens DSM 2782]
gi|325985698|gb|EGD46534.1| asparagine synthase (glutamine-hydrolyzing) [Clostridium
papyrosolvens DSM 2782]
Length = 609
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 14 LFSGGQDSSTCLSWA---LDRFDRVETLSFDY 42
L SGG DSS + A D + T SF+Y
Sbjct: 264 LLSGGLDSSVVTAVARADKKNGDLLSTYSFEY 295
>gi|238917789|ref|YP_002931306.1| cell cycle protein MesJ [Eubacterium eligens ATCC 27750]
gi|238873149|gb|ACR72859.1| cell cycle protein MesJ [Eubacterium eligens ATCC 27750]
Length = 486
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRF-------DRVETLSFDYGQRNKV---ELE 51
N+++ ++ SGG DS CL L + + + ++G R + E
Sbjct: 15 NNMLTDCERVVVGLSGGADS-VCLLMVLKGYIERRRLQTELCAVHVNHGIRQEAGDDEEF 73
Query: 52 CRLCVRKKIVELMPKWKDSLGEDHILPLAI 81
R + VE M D+ G L +++
Sbjct: 74 ARALCERMGVEFMAYHIDAAGLAKQLGMSV 103
>gi|238761162|ref|ZP_04622139.1| Argininosuccinate synthase [Yersinia kristensenii ATCC 33638]
gi|238761415|ref|ZP_04622391.1| Argininosuccinate synthase [Yersinia kristensenii ATCC 33638]
gi|238700389|gb|EEP93130.1| Argininosuccinate synthase [Yersinia kristensenii ATCC 33638]
gi|238700642|gb|EEP93382.1| Argininosuccinate synthase [Yersinia kristensenii ATCC 33638]
Length = 454
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ + E + +K +E + +
Sbjct: 18 FSGGLDTSAALLWMQKKGAIPYAYTANLGQ---PDEEDYEAIPRKAMEYGAEKARLIDCR 74
Query: 75 HILPLAILGDISHSSLTKNVA 95
L + I + A
Sbjct: 75 KQLVAEGIAAIQCGAFHNTTA 95
>gi|225853749|ref|YP_002735261.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae JJA]
gi|254811466|sp|C1CBU0|MNMA_STRZJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|225723263|gb|ACO19116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae JJA]
Length = 373
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|150003843|ref|YP_001298587.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides vulgatus ATCC
8482]
gi|205810962|sp|A6KZV1|MNMA3_BACV8 RecName: Full=tRNA-specific 2-thiouridylase mnmA 3
gi|149932267|gb|ABR38965.1| putative tRNA methyltransferase [Bacteroides vulgatus ATCC 8482]
Length = 375
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 16/89 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQR------NK 47
+ + L+ SGG DSS ++ V ++ GQ
Sbjct: 1 MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDVPSRFSTPGQDEPDDVLEA 60
Query: 48 VELECRLCVRKKIVELMPKWKDSLGEDHI 76
L RL + + ++ ++K + + I
Sbjct: 61 RALAERLGIEHHVADVRKEFKQIIVKHFI 89
>gi|148996542|ref|ZP_01824260.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP11-BS70]
gi|307066804|ref|YP_003875770.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Streptococcus pneumoniae AP200]
gi|147757117|gb|EDK64156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae SP11-BS70]
gi|306408341|gb|ADM83768.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Streptococcus pneumoniae AP200]
Length = 373
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|78042874|ref|YP_358976.1| asparagine synthase [Carboxydothermus hydrogenoformans Z-2901]
gi|77994989|gb|ABB13888.1| asparagine synthase (glutamine-hydrolyzing) [Carboxydothermus
hydrogenoformans Z-2901]
Length = 612
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 14 LFSGGQDSSTCLSWAL----DRFDRVETLSFDY 42
L SGG DS+ ++A R + + T S DY
Sbjct: 263 LLSGGLDSTVITAFAASHLHSRGETLNTFSVDY 295
>gi|22126476|ref|NP_669899.1| argininosuccinate synthase [Yersinia pestis KIM 10]
gi|45441281|ref|NP_992820.1| argininosuccinate synthase [Yersinia pestis biovar Microtus str.
91001]
gi|21959470|gb|AAM86150.1|AE013861_7 argininosuccinate synthetase [Yersinia pestis KIM 10]
gi|45436141|gb|AAS61697.1| argininosuccinate synthase [Yersinia pestis biovar Microtus str.
91001]
Length = 456
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ + E + +K +E + +
Sbjct: 19 FSGGLDTSAALLWMQKKGAIPYAYTANLGQ---PDEEDYEAIPRKAMEYGAEKARLIDCR 75
Query: 75 HILPLAILGDISHSSLTKNVA 95
L + I + A
Sbjct: 76 KQLVAEGIAAIQCGAFHNTTA 96
>gi|86136778|ref|ZP_01055356.1| argininosuccinate synthase [Roseobacter sp. MED193]
gi|85826102|gb|EAQ46299.1| argininosuccinate synthase [Roseobacter sp. MED193]
Length = 408
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAELL 55
>gi|114331186|ref|YP_747408.1| sulfate adenylyltransferase subunit 2 [Nitrosomonas eutropha C91]
gi|114308200|gb|ABI59443.1| sulfate adenylyltransferase subunit 2 [Nitrosomonas eutropha C91]
Length = 309
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCV 56
M ++ + + +LLFSGG+DS L A F + D G +E R
Sbjct: 28 MREVAAECANPVLLFSGGKDSVVLLRLAEKAFRPSHFPFPLMHIDTGHNFPEVIEFRDYR 87
Query: 57 RKKIVELM 64
K++ E +
Sbjct: 88 AKQLGERL 95
>gi|51595916|ref|YP_070107.1| argininosuccinate synthase [Yersinia pseudotuberculosis IP 32953]
gi|108812571|ref|YP_648338.1| argininosuccinate synthase [Yersinia pestis Nepal516]
gi|145598692|ref|YP_001162768.1| argininosuccinate synthase [Yersinia pestis Pestoides F]
gi|149366488|ref|ZP_01888522.1| argininosuccinate synthase [Yersinia pestis CA88-4125]
gi|153950059|ref|YP_001401377.1| argininosuccinate synthase [Yersinia pseudotuberculosis IP 31758]
gi|162421528|ref|YP_001606190.1| argininosuccinate synthase [Yersinia pestis Angola]
gi|165925445|ref|ZP_02221277.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939587|ref|ZP_02228132.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009334|ref|ZP_02230232.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211400|ref|ZP_02237435.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400219|ref|ZP_02305732.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421751|ref|ZP_02313504.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167424326|ref|ZP_02316079.1| argininosuccinate synthase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170024730|ref|YP_001721235.1| argininosuccinate synthase [Yersinia pseudotuberculosis YPIII]
gi|186895007|ref|YP_001872119.1| argininosuccinate synthase [Yersinia pseudotuberculosis PB1/+]
gi|218928708|ref|YP_002346583.1| argininosuccinate synthase [Yersinia pestis CO92]
gi|229841555|ref|ZP_04461714.1| argininosuccinate synthetase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229843666|ref|ZP_04463809.1| argininosuccinate synthetase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229894230|ref|ZP_04509413.1| argininosuccinate synthetase [Yersinia pestis Pestoides A]
gi|229902960|ref|ZP_04518077.1| argininosuccinate synthetase [Yersinia pestis Nepal516]
gi|294503543|ref|YP_003567605.1| argininosuccinate synthase [Yersinia pestis Z176003]
gi|24211513|sp|Q8ZFV7|ASSY_YERPE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|81691807|sp|Q66C31|ASSY_YERPS RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|123246354|sp|Q1CGZ2|ASSY_YERPN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|166221031|sp|A4TKI3|ASSY_YERPP RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|166989399|sp|A7FJE9|ASSY_YERP3 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|226729231|sp|B2JZQ2|ASSY_YERPB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|226729232|sp|A9R622|ASSY_YERPG RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|226729233|sp|B1JPT9|ASSY_YERPY RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|51589198|emb|CAH20818.1| argininosuccinate synthase [Yersinia pseudotuberculosis IP 32953]
gi|108776219|gb|ABG18738.1| argininosuccinate synthase [Yersinia pestis Nepal516]
gi|115347319|emb|CAL20215.1| argininosuccinate synthase [Yersinia pestis CO92]
gi|145210388|gb|ABP39795.1| argininosuccinate synthase [Yersinia pestis Pestoides F]
gi|149290862|gb|EDM40937.1| argininosuccinate synthase [Yersinia pestis CA88-4125]
gi|152961554|gb|ABS49015.1| argininosuccinate synthase [Yersinia pseudotuberculosis IP 31758]
gi|162354343|gb|ABX88291.1| argininosuccinate synthase [Yersinia pestis Angola]
gi|165912503|gb|EDR31135.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922554|gb|EDR39705.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991889|gb|EDR44190.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207171|gb|EDR51651.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960236|gb|EDR56257.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050168|gb|EDR61576.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057175|gb|EDR66938.1| argininosuccinate synthase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169751264|gb|ACA68782.1| Argininosuccinate synthase [Yersinia pseudotuberculosis YPIII]
gi|186698033|gb|ACC88662.1| argininosuccinate synthase [Yersinia pseudotuberculosis PB1/+]
gi|229680407|gb|EEO76506.1| argininosuccinate synthetase [Yersinia pestis Nepal516]
gi|229689274|gb|EEO81337.1| argininosuccinate synthetase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697921|gb|EEO87968.1| argininosuccinate synthetase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229703628|gb|EEO90644.1| argininosuccinate synthetase [Yersinia pestis Pestoides A]
gi|262361585|gb|ACY58306.1| argininosuccinate synthase [Yersinia pestis D106004]
gi|262365674|gb|ACY62231.1| argininosuccinate synthase [Yersinia pestis D182038]
gi|294354002|gb|ADE64343.1| argininosuccinate synthase [Yersinia pestis Z176003]
gi|320015559|gb|ADV99130.1| argininosuccinate synthetase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 455
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ + E + +K +E + +
Sbjct: 18 FSGGLDTSAALLWMQKKGAIPYAYTANLGQ---PDEEDYEAIPRKAMEYGAEKARLIDCR 74
Query: 75 HILPLAILGDISHSSLTKNVA 95
L + I + A
Sbjct: 75 KQLVAEGIAAIQCGAFHNTTA 95
>gi|330719943|gb|EGG98405.1| Argininosuccinate synthase [gamma proteobacterium IMCC2047]
Length = 405
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPK 66
+L +SGG D+S W + + V T + D GQ +VE I E+ +
Sbjct: 5 KKVVLAYSGGLDTSVICKWIQETYNCEVVTFTADLGQGEEVEPARAKAEALGIKEIYIDD 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D + P+ I ++
Sbjct: 65 LREEFVRDFVFPMFRANAIYEGEYLLGTSIA 95
>gi|222824480|ref|YP_002576054.1| hypothetical protein Cla_1498 [Campylobacter lari RM2100]
gi|222539701|gb|ACM64802.1| conserved hypothetical protein [Campylobacter lari RM2100]
Length = 327
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + + V+ L+ + G
Sbjct: 2 KALALFSGGLDSMLAIKLITSQGIEVKALNINIG 35
>gi|167045738|gb|ABZ10385.1| putative arginosuccinate synthase [uncultured marine bacterium
HF4000_APKG2098]
Length = 395
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ---RNKVELECRLCVRKKI 60
+K+ +L +SGG D+S L W + ++ V T + D GQ +NK+ + KKI
Sbjct: 1 MKEKRKVVLAYSGGLDTSIILKWLQENYNVEVITYTADIGQKINKNKIIDNAKKLGAKKI 60
Query: 61 VELMPKWKDSLGEDHILPL 79
+ + +D D++ P+
Sbjct: 61 I--IENLRDIFVRDYVFPM 77
>gi|169834334|ref|YP_001693654.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae
Hungary19A-6]
gi|205828976|sp|B1I833|MNMA_STRPI RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|168996836|gb|ACA37448.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus pneumoniae Hungary19A-6]
Length = 373
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|160914335|ref|ZP_02076554.1| hypothetical protein EUBDOL_00343 [Eubacterium dolichum DSM 3991]
gi|158433808|gb|EDP12097.1| hypothetical protein EUBDOL_00343 [Eubacterium dolichum DSM 3991]
Length = 430
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
LL SGG DSS + + ++ + ++G K E E + V K
Sbjct: 136 KKVLLALSGGVDSSVVAAMLIKAIGKQLVCVHVNHGLMRKGESESVVEVFK 186
>gi|332519045|ref|ZP_08395512.1| Argininosuccinate synthase [Lacinutrix algicola 5H-3-7-4]
gi|332044893|gb|EGI81086.1| Argininosuccinate synthase [Lacinutrix algicola 5H-3-7-4]
Length = 395
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
++ +SGG D+S C + +L + V +S + G E++ K+ K
Sbjct: 2 SNKKLVIAYSGGLDTSYC-AVSLSKDYDVHAVSVNTGGFTAEEIKKIESNAYKMGVSTYK 60
Query: 67 WKDSLGE--DHILPLAILGDISHSS 89
D++ + ++ I G++ ++
Sbjct: 61 NIDAVATFYNKVVKYLIFGNVLKNA 85
>gi|325128645|gb|EGC51514.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis N1568]
Length = 367
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + ++ SGG DSS + + +V +
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGV 37
>gi|307710241|ref|ZP_07646684.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis SK564]
gi|307619003|gb|EFN98136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis SK564]
Length = 373
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|255932933|ref|XP_002557937.1| Pc12g11190 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582556|emb|CAP80746.1| Pc12g11190 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 416
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ L +SGG D+S L + ++ V D GQ + + E KI L
Sbjct: 6 VCLAYSGGLDTSCILKYLIEEGYEVVCFMADVGQ--EEDFEAAREKALKIGAL 56
>gi|160939548|ref|ZP_02086897.1| hypothetical protein CLOBOL_04441 [Clostridium bolteae ATCC
BAA-613]
gi|158437499|gb|EDP15262.1| hypothetical protein CLOBOL_04441 [Clostridium bolteae ATCC
BAA-613]
Length = 433
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 8/96 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + V K ++ +
Sbjct: 139 RKVLLALSGGVDSSVVAALLIKAIGKQLTCVHVNHGLMRKGESESVIDVFKNQMDANLVY 198
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
D++ LG ++ + + I +
Sbjct: 199 VDAVDR-------FLGKLAGVADPEQKRKIIGAEFI 227
>gi|126697236|ref|YP_001092122.1| argininosuccinate synthase [Prochlorococcus marinus str. MIT
9301]
gi|166221002|sp|A3PFJ6|ASSY_PROM0 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|126544279|gb|ABO18521.1| Argininosuccinate synthase [Prochlorococcus marinus str. MIT
9301]
Length = 404
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELECRLCV 56
+++ +L +SGG D+S C+ + + E ++F D GQ +EL + +
Sbjct: 1 MQQVKKVVLAYSGGVDTSVCIPYLKKEYGVSEVVTFVADLGQGEDLELIRQKAL 54
>gi|323484330|ref|ZP_08089697.1| argininosuccinate synthase [Clostridium symbiosum WAL-14163]
gi|323402324|gb|EGA94655.1| argininosuccinate synthase [Clostridium symbiosum WAL-14163]
Length = 416
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK---VELECRLCVRKK 59
+ KK +L +SGG D+S + W + + V +S D GQ + +E + K
Sbjct: 1 MEKKYNKIVLAYSGGLDTSVLIPWLKENYGCEVVAVSADVGQGAELIGLEEKALKTGASK 60
Query: 60 IVELMPKWKDSLGEDHILP 78
+ + K +++I+P
Sbjct: 61 L--YIEDLKKEFVDEYIIP 77
>gi|306828717|ref|ZP_07461909.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis ATCC 6249]
gi|304428895|gb|EFM31983.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis ATCC 6249]
Length = 373
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|303231180|ref|ZP_07317918.1| argininosuccinate synthase [Veillonella atypica ACS-049-V-Sch6]
gi|302514087|gb|EFL56091.1| argininosuccinate synthase [Veillonella atypica ACS-049-V-Sch6]
Length = 403
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+ KA +L +SGG D+S + W + + V + D GQ
Sbjct: 1 MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41
>gi|289423018|ref|ZP_06424838.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
gi|289156592|gb|EFD05237.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
Length = 428
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 148 HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGK 207
+ + ++L +E VT+ P + K E + Q V L+ + +C
Sbjct: 269 PHYMGLFQKLLDL-IELKVTLVNPYQFKTKGEML---LNCKNQSFVRENLDNTMSCSHPD 324
Query: 208 --RDKRYEWGYGCNSCPACYLRQKGWMEFK 235
R ++ + C C C +RQ M
Sbjct: 325 NGRMQKEKEARHCGYCLPCVIRQAAIMRAG 354
>gi|256752921|ref|ZP_05493754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter ethanolicus CCSD1]
gi|256748201|gb|EEU61272.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter ethanolicus CCSD1]
Length = 172
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVE 62
++ + SGG DSS + V L+ ++ + + C K +
Sbjct: 24 MEINNRVAIGMSGGVDSSVAAYLLKKQGFDVIGLTMRVWVDHEAKAFDSDKSCCSLKATQ 83
Query: 63 LMPKWKDSLGEDH-ILPLAIL 82
K + LG H + L+ +
Sbjct: 84 DAKKVAEILGIPHYTVDLSKI 104
>gi|254253215|ref|ZP_04946533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia dolosa AUO158]
gi|124895824|gb|EAY69704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia dolosa AUO158]
Length = 382
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|55380003|ref|YP_137853.1| GMP synthase subunit B [Haloarcula marismortui ATCC 43049]
gi|57012760|sp|Q5UX56|GUAAB_HALMA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|55232728|gb|AAV48147.1| GMP synthase [Haloarcula marismortui ATCC 43049]
Length = 305
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
A++ SGG DSST + A + D++ + D G
Sbjct: 22 KHAVIGLSGGVDSSTAAALAYEAIGDQLTAVYVDTG 57
>gi|308389689|gb|ADO32009.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Neisseria meningitidis alpha710]
Length = 367
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + ++ SGG DSS + + +V +
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGV 37
>gi|300855847|ref|YP_003780831.1| hypothetical protein CLJU_c26710 [Clostridium ljungdahlii DSM
13528]
gi|300435962|gb|ADK15729.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 272
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 39/191 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
+ ++ S ++ FSGG DS+ L A D D+V ++ K+ +
Sbjct: 13 ENLRNIKSGVIAFSGGVDSTFLLKIAHDILEDKVIAVT-----------AASSTYPKREL 61
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ K+ S+G H++ + DI L
Sbjct: 62 DEAKKYAKSIGVRHLIIESEELDIKGYKENPVDRCYYCKKEL------------FSKLKE 109
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLKKYE 179
+A + ++ G D + R ++ A LG + +PL L K +
Sbjct: 110 IAKENNVAYVLDGANLDDTGDF---RPG----MKAAKELG------ILSPLKEAELTKED 156
Query: 180 TWKLAQDIGGQ 190
L++ IG
Sbjct: 157 IRNLSKRIGLP 167
>gi|268325116|emb|CBH38704.1| hypothetical protein, asparagine synthase and DUF71 family
[uncultured archaeon]
Length = 711
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 15/132 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+LFSGG DS+ + + + + E ++ +L K K
Sbjct: 236 VLFSGGLDSTLIAYLCKELGADFVCYTVAVEEPGMKDAEDLDYAKQIAADLGLKLKLIKM 295
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+L + +S T V + + LP L A A GI ++
Sbjct: 296 RADVLEKPLHEVVSWIDDTDVVKVSVA---LP-----------LYVACEHARAEGIKTLL 341
Query: 133 IGVCETD-YSGY 143
G+ + ++GY
Sbjct: 342 YGLGTEELFAGY 353
>gi|238762815|ref|ZP_04623784.1| NAD+ synthase [Yersinia kristensenii ATCC 33638]
gi|238699120|gb|EEP91868.1| NAD+ synthase [Yersinia kristensenii ATCC 33638]
Length = 540
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ L+ A+D D+V+ L F Y + + K+ E++
Sbjct: 283 AVLGLSGGIDSALTLAIAVDALGKDKVQALMMPFRY------TADISIADAKEEAEILGI 336
Query: 67 WKDSLGEDHILPLAILGDIS 86
D L + + A +G +S
Sbjct: 337 EFDVLSIEPMFD-AFMGQLS 355
>gi|238018537|ref|ZP_04598963.1| hypothetical protein VEIDISOL_00364 [Veillonella dispar ATCC
17748]
gi|303229857|ref|ZP_07316634.1| argininosuccinate synthase [Veillonella atypica ACS-134-V-Col7a]
gi|237865008|gb|EEP66298.1| hypothetical protein VEIDISOL_00364 [Veillonella dispar ATCC
17748]
gi|302515487|gb|EFL57452.1| argininosuccinate synthase [Veillonella atypica ACS-134-V-Col7a]
Length = 403
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+ KA +L +SGG D+S + W + + V + D GQ
Sbjct: 1 MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41
>gi|196230245|ref|ZP_03129108.1| Argininosuccinate synthase [Chthoniobacter flavus Ellin428]
gi|196225842|gb|EDY20349.1| Argininosuccinate synthase [Chthoniobacter flavus Ellin428]
Length = 429
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE---LMP 65
++ +SGG D+S L+W + + + D GQ + EL+ + +
Sbjct: 2 KIVVAYSGGLDTSVLLTWLKETYSAEIVAFCADVGQ--EEELDGLEAKALRTGASKCYID 59
Query: 66 KWKDSLGEDHILPLAILGDI 85
++ D I P+ G I
Sbjct: 60 DLREEFARDFIFPMFQAGAI 79
>gi|160940314|ref|ZP_02087659.1| hypothetical protein CLOBOL_05203 [Clostridium bolteae ATCC
BAA-613]
gi|158436894|gb|EDP14661.1| hypothetical protein CLOBOL_05203 [Clostridium bolteae ATCC
BAA-613]
Length = 351
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL 54
SGG DSS ++ V ++ Q E++
Sbjct: 1 MSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEDTEVQEAE 40
>gi|121635213|ref|YP_975458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis FAM18]
gi|166235071|sp|A1KUY0|MNMA_NEIMF RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|120866919|emb|CAM10679.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis FAM18]
gi|325130624|gb|EGC53368.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis OX99.30304]
gi|325132760|gb|EGC55443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis M6190]
gi|325136777|gb|EGC59377.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis M0579]
gi|325138645|gb|EGC61204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis ES14902]
gi|325204520|gb|ADY99973.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis M01-240355]
Length = 367
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + ++ SGG DSS + + +V +
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGV 37
>gi|18976579|ref|NP_577936.1| argininosuccinate synthase [Pyrococcus furiosus DSM 3638]
gi|24211504|sp|Q8U484|ASSY_PYRFU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|18892142|gb|AAL80331.1| argininosuccinate synthase [Pyrococcus furiosus DSM 3638]
Length = 410
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE-LECRLCVRKKIVELMPKW 67
+L +SGG D+S L ++ V T++ D GQ++ E +E + +
Sbjct: 2 RIVLAYSGGLDTSVILKLMQEKLGAEVITVTVDVGQKDDFEKIEEKAYKFGAVKHYYIDA 61
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMK 97
K+ E+++ + ++ + A+
Sbjct: 62 KEEFAENYVCKAIKANALYENAYPLSTALA 91
>gi|194336464|ref|YP_002018258.1| Argininosuccinate synthase [Pelodictyon phaeoclathratiforme BU-1]
gi|229889884|sp|B4S9U5|ASSY_PELPB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|194308941|gb|ACF43641.1| Argininosuccinate synthase [Pelodictyon phaeoclathratiforme BU-1]
Length = 400
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
+ K A+ SGG D+S + W D++D + ++ + GQ+ ++E +
Sbjct: 1 MSKEKIAIAY-SGGLDTSIMIKWLKDKYDAEIVAVTGNLGQQKEIENLESKAIA 53
>gi|332703890|ref|ZP_08423978.1| tRNA(Ile)-lysidine synthase [Desulfovibrio africanus str. Walvis
Bay]
gi|332554039|gb|EGJ51083.1| tRNA(Ile)-lysidine synthase [Desulfovibrio africanus str. Walvis
Bay]
Length = 340
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
Query: 7 KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
K L+ SGG DS+ L A + D+G R + + C +
Sbjct: 34 KGKRLLVALSGGADSTALLYCLRYLAPRMCISLLAAHVDHGLRPESGQDAAYCRELCAAQ 93
Query: 63 LMPKWKDSLGEDHILPLAILG 83
+P ++ L + + +G
Sbjct: 94 NVPLYEAKLDVSGLAKQSGMG 114
>gi|325134641|gb|EGC57281.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis M13399]
gi|325144816|gb|EGC67105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis M01-240013]
gi|325205709|gb|ADZ01162.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis M04-240196]
Length = 367
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + ++ SGG DSS + + +V +
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGV 37
>gi|260431981|ref|ZP_05785952.1| argininosuccinate synthase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415809|gb|EEX09068.1| argininosuccinate synthase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 408
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARQKAELL 55
>gi|226356219|ref|YP_002785959.1| tRNA-specific 2-thiouridylase MnmA [Deinococcus deserti VCD115]
gi|226318209|gb|ACO46205.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Deinococcus deserti VCD115]
Length = 391
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV 35
+ + L SGG DSS + D+ +V
Sbjct: 12 HSPAPQGERVLCAMSGGVDSSVTAALLKDQGYQV 45
>gi|90961287|ref|YP_535203.1| argininosuccinate synthase [Lactobacillus salivarius UCC118]
gi|119361283|sp|Q1WV65|ASSY_LACS1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|90820481|gb|ABD99120.1| Argininosuccinate synthase [Lactobacillus salivarius UCC118]
Length = 403
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMPKWK 68
+L +SGG D+S ++W ++ V D G+ +E ++ VE ++ K
Sbjct: 5 KVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVGEGKDLEAIKEKGLKVGAVESIVIDAK 64
Query: 69 DSLGEDHILP 78
E+++LP
Sbjct: 65 HEFAEEYVLP 74
>gi|56964502|ref|YP_176233.1| argininosuccinate synthase [Bacillus clausii KSM-K16]
gi|68566236|sp|Q5WED8|ASSY_BACSK RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|56910745|dbj|BAD65272.1| argininosuccinate synthase [Bacillus clausii KSM-K16]
Length = 403
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+L +SGG D+S + W D+ V + D G
Sbjct: 3 KEKVVLAYSGGLDTSVAVKWLTDKGYDVIAVGLDVG 38
>gi|87306814|ref|ZP_01088960.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Blastopirellula marina DSM 3645]
gi|87290187|gb|EAQ82075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Blastopirellula marina DSM 3645]
Length = 363
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 14/134 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-----KVELECRLCVRKKIVELMPKWKD 69
SGG DSS L+ V + +G+++ +++ + L + +
Sbjct: 1 MSGGVDSSVAAHLLLEEGHEVIGVFMRHGEQSPVASCQIDGQSALPILNDRPDHKQGCCS 60
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR---------NIIFLVFAA 120
+ +A I +L + + +V GR N I
Sbjct: 61 ASDAADARRVADNLQIPFYALNLQREFGQIIDYFVDEYVAGRTPNPCVMCNNWIKFGKLF 120
Query: 121 TLAYRLGITNIVIG 134
A +G + G
Sbjct: 121 DYADSVGAEYVATG 134
>gi|325527989|gb|EGD05219.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia sp. TJI49]
Length = 387
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 2 SKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|312869093|ref|ZP_07729267.1| argininosuccinate synthase [Lactobacillus oris PB013-T2-3]
gi|311095339|gb|EFQ53609.1| argininosuccinate synthase [Lactobacillus oris PB013-T2-3]
Length = 409
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+L +SGG D+S ++W +++ V D G
Sbjct: 3 KEKIVLAYSGGLDTSVAIAWLMNKGYDVIACCIDVG 38
>gi|261392212|emb|CAX49726.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis 8013]
Length = 367
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + ++ SGG DSS + + +V +
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGV 37
>gi|323341801|ref|ZP_08082034.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erysipelothrix rhusiopathiae ATCC 19414]
gi|322464226|gb|EFY09419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erysipelothrix rhusiopathiae ATCC 19414]
Length = 372
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 10/28 (35%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET 37
L+ SGG DS+ + V
Sbjct: 2 KVLVGLSGGVDSAVAAHILKSQGHDVTC 29
>gi|227832313|ref|YP_002834020.1| GMP synthase [Corynebacterium aurimucosum ATCC 700975]
gi|262183830|ref|ZP_06043251.1| GMP synthase [Corynebacterium aurimucosum ATCC 700975]
gi|227453329|gb|ACP32082.1| GMP synthase [Corynebacterium aurimucosum ATCC 700975]
Length = 522
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
+ + I + A+ SGG DS+ + DR+ + D+G
Sbjct: 215 VREQIGEEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG 258
>gi|224373095|ref|YP_002607467.1| argininosuccinate synthase [Nautilia profundicola AmH]
gi|223588443|gb|ACM92179.1| argininosuccinate synthase [Nautilia profundicola AmH]
Length = 400
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+L +SGG D+S L W D + V T + D GQ +VE E R K V+ +
Sbjct: 2 KVVLAYSGGLDTSIILKWLQDTYNAEVVTFTADIGQGEEVE-EAREKAIKLGVKPENIFI 60
Query: 69 DSLGEDHILP 78
+ L ED +
Sbjct: 61 EDLREDFVRD 70
>gi|253702333|ref|YP_003023522.1| argininosuccinate synthase [Geobacter sp. M21]
gi|259585360|sp|C6E6Y6|ASSY_GEOSM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|251777183|gb|ACT19764.1| argininosuccinate synthase [Geobacter sp. M21]
Length = 406
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE-- 62
K+ +L +SGG D+S L W + + V T S D GQ +++E R K +
Sbjct: 4 KEVKKIVLAYSGGLDTSIILKWLKNEYGCEVVTFSADLGQGDELE-PVREKAFKTGADKV 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ ++ D + P+ I S ++
Sbjct: 63 YIDDLREEFVRDFVFPMFRANAIYEGSYLLGTSIA 97
>gi|172038916|ref|YP_001805417.1| asparagine synthetase B [Cyanothece sp. ATCC 51142]
gi|171700370|gb|ACB53351.1| asparagine synthetase [Cyanothece sp. ATCC 51142]
Length = 501
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 59/199 (29%), Gaps = 43/199 (21%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS + A + T S VE + + + + +
Sbjct: 226 LSGGLDSSIIAAIAKKHKSELHTFSV------GVEGSKDINAARLVSDYLGTIHHEYLIT 279
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV-FAATLAYRL----GIT 129
+A L +I A++ D +L + +P F AA + G
Sbjct: 280 PKEAIAKLPEI-------IYALESFDQDLVRSAIPC---YFTSRLAAQYVKVILTGEGAD 329
Query: 130 NIVIGVCETDYSGYPDCRHDTIR--------------AIETAINLGMESHVTVHTPLMWL 175
+ G Y+ Y D D I ++ L M + P + L
Sbjct: 330 ELFAG-----YTYYKDITSDAILHTELRRSVSSLHNINLQRVDRLTMAHSIEGRVPFLDL 384
Query: 176 KKYETWKLAQDIGGQDLVN 194
K +L Q I +
Sbjct: 385 K---MIELGQKIPAHLKLR 400
>gi|170288548|ref|YP_001738786.1| PP-loop domain-containing protein [Thermotoga sp. RQ2]
gi|170176051|gb|ACB09103.1| PP-loop domain protein [Thermotoga sp. RQ2]
Length = 304
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 47/140 (33%), Gaps = 18/140 (12%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + L+ SGG+DS + V+ L G + + +K E
Sbjct: 42 KMFGRNSKILIAVSGGKDSVSLWHMLKKLGYEVDALFIRAG---------KSGMVQKAQE 92
Query: 63 LMPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ K + L HI+ + S+ ++ ++ ++ R +
Sbjct: 93 IVEKNAELLNTKLHIVDATEYFE-GLSTQEISIMLRRPVCSICGVV---RRYLM----NK 144
Query: 122 LAYRLGITNIVIGVCETDYS 141
AY G +V G D +
Sbjct: 145 FAYENGYDVVVTGHNLNDEA 164
>gi|157693155|ref|YP_001487617.1| tRNA-specific 2-thiouridylase MnmA [Bacillus pumilus SAFR-032]
gi|194017112|ref|ZP_03055724.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus pumilus ATCC 7061]
gi|166991121|sp|A8FFP0|MNMA_BACP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|157681913|gb|ABV63057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus pumilus SAFR-032]
gi|194010980|gb|EDW20550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus pumilus ATCC 7061]
Length = 372
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K P ++ SGG DSS ++ V +
Sbjct: 1 MTKRPEDTRVVVGMSGGVDSSVAALMLKEQGYDVIGI 37
>gi|77166112|ref|YP_344637.1| hypothetical protein Noc_2654 [Nitrosococcus oceani ATCC 19707]
gi|254435585|ref|ZP_05049092.1| tRNA methyl transferase [Nitrosococcus oceani AFC27]
gi|76884426|gb|ABA59107.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
gi|207088696|gb|EDZ65968.1| tRNA methyl transferase [Nitrosococcus oceani AFC27]
Length = 347
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + A+ L SGG DS + ++ VE ++F
Sbjct: 1 MGRQYKAIALVSGGLDSMLAVKVIQEQGIHVEGINF 36
>gi|55980253|ref|YP_143550.1| argininosuccinate synthase [Thermus thermophilus HB8]
gi|34921440|sp|P59846|ASSY_THET8 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|20150774|pdb|1KH1|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase
gi|20150775|pdb|1KH1|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase
gi|20150776|pdb|1KH1|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase
gi|20150777|pdb|1KH1|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase
gi|20150778|pdb|1KH2|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Atp
gi|20150779|pdb|1KH2|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Atp
gi|20150780|pdb|1KH2|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Atp
gi|20150781|pdb|1KH2|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Atp
gi|20150950|pdb|1KOR|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Inhibitors
gi|20150951|pdb|1KOR|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Inhibitors
gi|20150952|pdb|1KOR|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Inhibitors
gi|20150953|pdb|1KOR|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Inhibitors
gi|30749317|pdb|1J1Z|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Substrate
gi|30749318|pdb|1J1Z|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Substrate
gi|30749319|pdb|1J1Z|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Substrate
gi|30749320|pdb|1J1Z|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Substrate
gi|30749321|pdb|1J20|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Product
gi|30749322|pdb|1J20|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Product
gi|30749323|pdb|1J20|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Product
gi|30749324|pdb|1J20|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Product
gi|30749325|pdb|1J21|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Atp And
Citrulline
gi|30749326|pdb|1J21|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Atp And
Citrulline
gi|30749327|pdb|1J21|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Atp And
Citrulline
gi|30749328|pdb|1J21|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Atp And
Citrulline
gi|30749369|pdb|1KH3|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Inhibitor
gi|30749370|pdb|1KH3|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Inhibitor
gi|30749371|pdb|1KH3|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Inhibitor
gi|30749372|pdb|1KH3|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
Argininosuccinate Synthetase In Complex With Inhibitor
gi|55771666|dbj|BAD70107.1| argininosuccinate synthetase [Thermus thermophilus HB8]
Length = 400
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV-ELMPKW 67
+L +SGG D+S L W + + V + D GQ +VE +R +
Sbjct: 2 KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDL 61
Query: 68 KDSLGEDHILPL 79
K+ D + P+
Sbjct: 62 KEEFVRDFVFPM 73
>gi|15677407|ref|NP_274563.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis MC58]
gi|14195280|sp|Q9JYJ6|MNMA_NEIMB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|7226803|gb|AAF41910.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis MC58]
gi|316983800|gb|EFV62780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis H44/76]
gi|325199845|gb|ADY95300.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria meningitidis H44/76]
Length = 367
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + ++ SGG DSS + + +V +
Sbjct: 1 MN-TTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGV 37
>gi|89100972|ref|ZP_01173817.1| TrmU [Bacillus sp. NRRL B-14911]
gi|89084308|gb|EAR63464.1| TrmU [Bacillus sp. NRRL B-14911]
Length = 370
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS ++ V +
Sbjct: 6 KDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|86144504|ref|ZP_01062836.1| NAD(+) synthetase [Vibrio sp. MED222]
gi|85837403|gb|EAQ55515.1| NAD(+) synthetase [Vibrio sp. MED222]
Length = 276
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 63/205 (30%), Gaps = 36/205 (17%)
Query: 2 NDIIKKAPSALLL-FSGGQDSSTC--LSW---------ALDRFDRVETLSFDYG-QRNKV 48
+ + +L+L SGG DS+TC L+ A + + YG Q+++
Sbjct: 30 TKLQQSGCKSLILGISGGVDSTTCGRLAQMTVDSLNESAGSDEYQFIAVRLPYGEQKDED 89
Query: 49 ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
E + L + + K + H L T + + N+
Sbjct: 90 EAQLALSFIQPSQSVSVNIKAGVDGLHAASHVALEGTGLL-PTDSAKIDFVKGNVK---- 144
Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
R A +A + V TD+S + I
Sbjct: 145 -AR-------ARMIAQYEIAGYVGGLVIGTDHSA------ENITGF----YTKHGDGACD 186
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + +LA +G + +
Sbjct: 187 LAPLFGLNKRQVRELAATLGAPEQL 211
>gi|315638313|ref|ZP_07893494.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter upsaliensis JV21]
gi|315481660|gb|EFU72283.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter upsaliensis JV21]
Length = 338
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 39/133 (29%), Gaps = 26/133 (19%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKKIVELMPKW 67
L+ SGG DS+ V Y + + E + +K+ + +
Sbjct: 2 KILVAMSGGVDSTVTAYKLKQAGHEVIG---CYMKLHGKSGYHEENIAKVEKVAKFLQIP 58
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFA--AT 121
HIL L + + + ++ PN P R F+
Sbjct: 59 Y------HILDL---QEDFKAKVYMPFINTYKEGKTPN---PCALCNR---FIKLGKLLE 103
Query: 122 LAYRLGITNIVIG 134
A LG + G
Sbjct: 104 FAKSLGCEKLATG 116
>gi|309799040|ref|ZP_07693293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus infantis SK1302]
gi|308117275|gb|EFO54698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus infantis SK1302]
Length = 373
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|302538993|ref|ZP_07291335.1| asparagine synthase [Streptomyces sp. C]
gi|302447888|gb|EFL19704.1| asparagine synthase [Streptomyces sp. C]
Length = 360
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELM 64
LL SGG DS+ ++ Y GQ E + + I +
Sbjct: 255 LLLSGGLDSAVLAYLMR----PPVCVTVRYPGQDRLDESTTAAVIARDIGAEL 303
>gi|265752582|ref|ZP_06088151.1| tRNA methyl transferase [Bacteroides sp. 3_1_33FAA]
gi|263235768|gb|EEZ21263.1| tRNA methyl transferase [Bacteroides sp. 3_1_33FAA]
Length = 375
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 16/89 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQR------NK 47
+ + L+ SGG DSS ++ V ++ GQ
Sbjct: 1 MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDVPSRFSTPGQDEPDDVLEA 60
Query: 48 VELECRLCVRKKIVELMPKWKDSLGEDHI 76
L RL + + ++ ++K + + I
Sbjct: 61 KALAERLGIEHHVADVRKEFKQIIVKHFI 89
>gi|212692631|ref|ZP_03300759.1| hypothetical protein BACDOR_02128 [Bacteroides dorei DSM 17855]
gi|212664916|gb|EEB25488.1| hypothetical protein BACDOR_02128 [Bacteroides dorei DSM 17855]
Length = 375
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 16/89 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQR------NK 47
+ + L+ SGG DSS ++ V ++ GQ
Sbjct: 1 MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDIPSRFSTPGQDEPDDVLEA 60
Query: 48 VELECRLCVRKKIVELMPKWKDSLGEDHI 76
L RL + + ++ ++K + + I
Sbjct: 61 KALAERLGIEHHVADVRKEFKQIIVKHFI 89
>gi|195388470|ref|XP_002052903.1| GJ19601 [Drosophila virilis]
gi|194149360|gb|EDW65058.1| GJ19601 [Drosophila virilis]
Length = 684
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
LLL SGG DSS C + ++ + D G K E E + I
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALHPSQIIAVHVDNGFMRKNESEKVERSLRDI 282
>gi|167847243|ref|ZP_02472751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei B7210]
Length = 373
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|71280272|ref|YP_267838.1| thiamine biosynthesis protein ThiI [Colwellia psychrerythraea 34H]
gi|123633537|sp|Q487C7|THII_COLP3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|71146012|gb|AAZ26485.1| thiamine biosynthesis protein ThiI [Colwellia psychrerythraea 34H]
Length = 484
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 59/197 (29%), Gaps = 25/197 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I L L SGG DS + + R F+ G K+I
Sbjct: 175 PIATQEDVLSLMSGGFDSGVSSYQMIKKGARTHYCFFNLGG------SAHEVGVKQISYY 228
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ W + A+ + + + +NV V R + + A +A
Sbjct: 229 L--WNKFGASHKVKFFAVDFEPVVAEILENVENSQMG------VVLKR--MMIRAATKIA 278
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
R I +V G S + + + + + PL K + +
Sbjct: 279 ERGKIQALVTGESLGQVSS---------QTLTNLNVINRVTDTLILRPLAAYDKQDIIDI 329
Query: 184 AQDIGGQDLVNLILEES 200
A+ IG ++ I E
Sbjct: 330 ARKIGTEEFSKTIPEYC 346
>gi|268589250|ref|ZP_06123471.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Providencia rettgeri DSM 1131]
gi|291315435|gb|EFE55888.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Providencia rettgeri DSM 1131]
Length = 366
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +V L
Sbjct: 3 NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGL 35
>gi|238893184|ref|YP_002917918.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae NTUH-K2044]
gi|238545500|dbj|BAH61851.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 433
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 10/70 (14%)
Query: 12 LLLFSGGQDSSTCLSW--ALDRFD---RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
L+ FSGG DS+ L L D + + + + V ++ +
Sbjct: 16 LVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHV----HHGLSAHADDWVAH-CRQICQQ 70
Query: 67 WKDSLGEDHI 76
W+ L H+
Sbjct: 71 WQVPLVVHHV 80
>gi|194379662|dbj|BAG58183.1| unnamed protein product [Homo sapiens]
Length = 328
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|163745096|ref|ZP_02152456.1| argininosuccinate synthase [Oceanibulbus indolifex HEL-45]
gi|161381914|gb|EDQ06323.1| argininosuccinate synthase [Oceanibulbus indolifex HEL-45]
Length = 408
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK 58
+ +L +SGG D+S L W + V T + D GQ ELE +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARKKAE 53
>gi|134298029|ref|YP_001111525.1| PP-loop domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134050729|gb|ABO48700.1| PP-loop domain protein [Desulfotomaculum reducens MI-1]
Length = 270
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 12/72 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+ +SGG DS+ L+ A+ D V ++ K E+ + K+
Sbjct: 19 KVLVAYSGGTDSAFLLAVAVQELGDNVLAVTAISPTSTKAEVAEAQQLAKE--------- 69
Query: 69 DSLGEDHILPLA 80
LG H + +
Sbjct: 70 --LGVHHRIIHS 79
>gi|302348418|ref|YP_003816056.1| Probable thiamine biosynthesis protein thiI [Acidilobus
saccharovorans 345-15]
gi|302328830|gb|ADL19025.1| Probable thiamine biosynthesis protein thiI [Acidilobus
saccharovorans 345-15]
Length = 375
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 57/187 (30%), Gaps = 43/187 (22%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ L SGG DS + R L+ G E R V +++ L
Sbjct: 167 RTVALVSGGIDSPVATWMIMKRGVVPLVLNLSIGG-----EEHRRAVLEEVRALRAWSGR 221
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
H + + + I V +++ L + A LA R G
Sbjct: 222 -----HDIKVFFVDGIPVMKGLAEVRRELRVVTLKR--------VLYRLAEALAIREGAH 268
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--------HVTVHTPLMWLKKYETW 181
+I G ++ + M + + V PL+ + K E
Sbjct: 269 SITTG-----------------ESLSQVSSQTMWNLEAEEHGIELPVLRPLIAMDKDEIA 311
Query: 182 KLAQDIG 188
++A+ IG
Sbjct: 312 EVARRIG 318
>gi|300113174|ref|YP_003759749.1| tRNA methyl transferase-like protein [Nitrosococcus watsonii
C-113]
gi|299539111|gb|ADJ27428.1| tRNA methyl transferase-like protein [Nitrosococcus watsonii
C-113]
Length = 347
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ + A+ L SGG DS + ++ VE ++F
Sbjct: 1 MGRQYKAIALVSGGLDSMLAVKVIQEQGIHVEGINF 36
>gi|288942424|ref|YP_003444664.1| asparagine synthase [Allochromatium vinosum DSM 180]
gi|288897796|gb|ADC63632.1| asparagine synthase (glutamine-hydrolyzing) [Allochromatium vinosum
DSM 180]
Length = 605
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Query: 1 MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRF-DRVETLSFDY-GQRNKVELECRL 54
M+D +++ + + SGG DS+ + ++ R+++ S Y G EL+
Sbjct: 244 MDDAMREHQRSDVPFGLFLSGGLDSAVLAAKLAEQGAGRIKSYSVGYRGTAMAHELDEAA 303
Query: 55 CVRKKI 60
V
Sbjct: 304 RVATHF 309
>gi|206890087|ref|YP_002249585.1| hypothetical protein THEYE_A1794 [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742025|gb|ACI21082.1| conserved protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 320
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 14/77 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS-------------FDYGQRNKVELECRLCV 56
AL L+SGG DS + ++ V L F+Y ++ E+ + +
Sbjct: 3 KALALYSGGLDSLLSVLIVKEQKVDVIALKFLTGFVSPLKEDDFNYAKQFDFEI-REIDI 61
Query: 57 RKKIVELMPKWKDSLGE 73
+K +E++ K K G+
Sbjct: 62 SEKFIEILKKPKHGYGK 78
>gi|166362943|ref|YP_001655216.1| hypothetical protein MAE_02020 [Microcystis aeruginosa NIES-843]
gi|166085316|dbj|BAG00024.1| hypothetical protein MAE_02020 [Microcystis aeruginosa NIES-843]
Length = 269
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 66/188 (35%), Gaps = 35/188 (18%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
+ +++K + AL+ +SGG DS+ A D + ++ ELE +
Sbjct: 12 LQNLLKTSEKALIAYSGGVDSTLVAKVAYDLLGSQALAITAVSPSLLPEELEEAIAQADY 71
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
I ++ + + +++S N + L +T P
Sbjct: 72 IG----------IRHELVETEEMNNPNYTSNPVNR-CYFCKSELHDTLKP---------- 110
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
+A G + ++ GV D Y R I+ A G S + + + K E
Sbjct: 111 --IALARGYSYVIDGVNADDLRDY---RPG----IQAARERGARSPLA----EIGITKSE 157
Query: 180 TWKLAQDI 187
+L++ +
Sbjct: 158 VRQLSRYL 165
>gi|53720497|ref|YP_109483.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia pseudomallei
K96243]
gi|126440060|ref|YP_001060365.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia pseudomallei
668]
gi|167817350|ref|ZP_02449030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 91]
gi|167904220|ref|ZP_02491425.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei NCTC 13177]
gi|217421190|ref|ZP_03452695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 576]
gi|81379110|sp|Q63QY5|MNMA_BURPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205813851|sp|A3NDE4|MNMA_BURP6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|52210911|emb|CAH36899.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei K96243]
gi|126219553|gb|ABN83059.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 668]
gi|217396602|gb|EEC36619.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 576]
Length = 383
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|332879744|ref|ZP_08447434.1| tRNA(Ile)-lysidine synthetase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682263|gb|EGJ55170.1| tRNA(Ile)-lysidine synthetase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 434
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 32/133 (24%), Gaps = 22/133 (16%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K L+ SGG DS V ++ R + VR
Sbjct: 10 KHQRVLVAISGGIDSVVLAHLLYSHGAEVILAHCNFSLRGEESDGDEAFVR--------S 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + LG ++ + + ++ L + F A A
Sbjct: 62 FAERLGVQLLVERFDTHAY---AKEHQLNTQLAARELRYEW-------FDRMAQAYA--- 108
Query: 127 GITNIVIGVCETD 139
I D
Sbjct: 109 -CAYIATAHHAND 120
>gi|328950099|ref|YP_004367434.1| tRNA-specific 2-thiouridylase mnmA [Marinithermus hydrothermalis
DSM 14884]
gi|328450423|gb|AEB11324.1| tRNA-specific 2-thiouridylase mnmA [Marinithermus hydrothermalis
DSM 14884]
Length = 374
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE 36
M++ ++ L SGG DSS + ++ V
Sbjct: 1 MSE--RRKGRVLAAMSGGVDSSVTAALLKEQGYEVI 34
>gi|325971025|ref|YP_004247216.1| argininosuccinate synthase [Spirochaeta sp. Buddy]
gi|324026263|gb|ADY13022.1| Argininosuccinate synthase [Spirochaeta sp. Buddy]
Length = 406
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPK 66
+L +SGG D+S L W ++ V + GQ +E + +
Sbjct: 3 KEKIILAYSGGLDTSVILKWLANKGFDVIAYVANVGQNEDFAAIEKKALATGASKVYVED 62
Query: 67 WKDSLGEDHILP 78
+ L D+I P
Sbjct: 63 LRKELVTDYIFP 74
>gi|315608203|ref|ZP_07883195.1| tRNA(Ile)-lysidine synthase [Prevotella buccae ATCC 33574]
gi|315250172|gb|EFU30169.1| tRNA(Ile)-lysidine synthase [Prevotella buccae ATCC 33574]
Length = 467
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK 47
+ +++ + ++ SGG DS L + VE ++ R +
Sbjct: 14 HQLLQSGETYIVALSGGADSVALLLILKELGYSVEAAHCNFNLRGE 59
>gi|313905035|ref|ZP_07838405.1| argininosuccinate synthase [Eubacterium cellulosolvens 6]
gi|313470105|gb|EFR65437.1| argininosuccinate synthase [Eubacterium cellulosolvens 6]
Length = 412
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
+ +L +SGG D++ + W + + + + GQ
Sbjct: 1 MSEKVVLAYSGGLDTTALIPWLKENFGYEIICVCINCGQ 39
>gi|313894426|ref|ZP_07827991.1| argininosuccinate synthase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441250|gb|EFR59677.1| argininosuccinate synthase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 403
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+ KA +L +SGG D+S + W + + V + D GQ
Sbjct: 1 MGKANKVVLAYSGGLDTSVIIPWLKENYGSEVIAVCVDLGQ 41
>gi|227487027|ref|ZP_03917343.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Corynebacterium glucuronolyticum ATCC 51867]
gi|227093101|gb|EEI28413.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Corynebacterium glucuronolyticum ATCC 51867]
Length = 609
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 30/192 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ SGG DS+ + DR+ + D+G R R+++ E K
Sbjct: 311 RAICGLSGGVDSAVAAAIVQRAIGDRLTCVFVDHG-------LLRAGERQQVEEDFVKAT 363
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ A L ++ + + I + F +A L
Sbjct: 364 GAKLVTVDESEAFLSKLAGVTEPEAKRKAIGAEFIR------------SFERAVAGVLDG 411
Query: 129 TNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
++ V T YPD I++ L + + PL L K E
Sbjct: 412 QDVGFLVQGT---LYPDVVESGGGSGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEVR 468
Query: 182 KLAQDIGGQDLV 193
+ +++G +++
Sbjct: 469 AVGRELGLPEVI 480
>gi|170699615|ref|ZP_02890654.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia ambifaria IOP40-10]
gi|170135497|gb|EDT03786.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia ambifaria IOP40-10]
Length = 384
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|115350645|ref|YP_772484.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia ambifaria AMMD]
gi|122323996|sp|Q0BI73|MNMA_BURCM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|115280633|gb|ABI86150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia ambifaria AMMD]
Length = 384
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|76810425|ref|YP_334767.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia pseudomallei
1710b]
gi|126451955|ref|YP_001067626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 1106a]
gi|242317503|ref|ZP_04816519.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 1106b]
gi|254191526|ref|ZP_04898029.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei Pasteur 52237]
gi|254194966|ref|ZP_04901396.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei S13]
gi|254261623|ref|ZP_04952677.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 1710a]
gi|254299216|ref|ZP_04966666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 406e]
gi|123598034|sp|Q3JNT6|MNMA_BURP1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205811476|sp|A3NZ55|MNMA_BURP0 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|76579878|gb|ABA49353.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 1710b]
gi|126225597|gb|ABN89137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 1106a]
gi|157808903|gb|EDO86073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 406e]
gi|157939197|gb|EDO94867.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei Pasteur 52237]
gi|169651715|gb|EDS84408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei S13]
gi|242140742|gb|EES27144.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 1106b]
gi|254220312|gb|EET09696.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 1710a]
Length = 383
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|167920433|ref|ZP_02507524.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei BCC215]
gi|237813753|ref|YP_002898204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei MSHR346]
gi|254180696|ref|ZP_04887294.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 1655]
gi|184211235|gb|EDU08278.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei 1655]
gi|237503455|gb|ACQ95773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia pseudomallei MSHR346]
Length = 383
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|53726189|ref|YP_103922.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia mallei ATCC
23344]
gi|67642326|ref|ZP_00441084.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei GB8 horse 4]
gi|121599684|ref|YP_991629.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia mallei SAVP1]
gi|124385119|ref|YP_001027125.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia mallei NCTC
10229]
gi|126448036|ref|YP_001082070.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia mallei NCTC
10247]
gi|167000516|ref|ZP_02266328.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei PRL-20]
gi|254178980|ref|ZP_04885634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei ATCC 10399]
gi|254202634|ref|ZP_04908997.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei FMH]
gi|254207974|ref|ZP_04914324.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei JHU]
gi|254355888|ref|ZP_04972166.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei 2002721280]
gi|81604334|sp|Q62H98|MNMA_BURMA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205811421|sp|A3MP84|MNMA_BURM7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205811429|sp|A2S5A6|MNMA_BURM9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205811467|sp|A1V076|MNMA_BURMS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|52429612|gb|AAU50205.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei ATCC 23344]
gi|121228494|gb|ABM51012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei SAVP1]
gi|124293139|gb|ABN02408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei NCTC 10229]
gi|126240906|gb|ABO03999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei NCTC 10247]
gi|147746881|gb|EDK53958.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei FMH]
gi|147751868|gb|EDK58935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei JHU]
gi|148024863|gb|EDK83041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei 2002721280]
gi|160694894|gb|EDP84902.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei ATCC 10399]
gi|238523456|gb|EEP86894.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei GB8 horse 4]
gi|243063570|gb|EES45756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia mallei PRL-20]
Length = 383
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|319760524|ref|YP_004124462.1| tRNA-specific 2-thiouridylase mnmA [Candidatus Blochmannia vafer
str. BVAF]
gi|318039238|gb|ADV33788.1| tRNA-specific 2-thiouridylase mnmA [Candidatus Blochmannia vafer
str. BVAF]
Length = 366
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS R +VE L
Sbjct: 2 KKVIVGISGGVDSSVSAWLLKKRGYKVEGL 31
>gi|296268616|ref|YP_003651248.1| GMP synthase large subunit [Thermobispora bispora DSM 43833]
gi|296091403|gb|ADG87355.1| GMP synthase, large subunit [Thermobispora bispora DSM 43833]
Length = 517
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE-------CRLCVRKKIV 61
A+ SGG DS+ + DR+ + D+G K E E V+ ++V
Sbjct: 217 RAICGLSGGVDSAVAAAIVHRAIGDRLTCVFVDHGLLRKGEAEQVERDFVAATGVKLRVV 276
Query: 62 ELMPKWKDSLG 72
+ ++ +L
Sbjct: 277 DASDRFLKALA 287
>gi|296124260|ref|YP_003632038.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Planctomyces limnophilus DSM 3776]
gi|296016600|gb|ADG69839.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Planctomyces limnophilus DSM 3776]
Length = 392
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+L SGG DSS + V L
Sbjct: 6 SKERVVLAMSGGVDSSVAAVLLQQQGYEVIGL 37
>gi|289423312|ref|ZP_06425120.1| GMP synthase [Peptostreptococcus anaerobius 653-L]
gi|289156243|gb|EFD04900.1| GMP synthase [Peptostreptococcus anaerobius 653-L]
Length = 511
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
+ AL SGG DSS + + + D+G
Sbjct: 210 KAMVGDKKALCALSGGVDSSVAAALMHKAIGKNLTCVFVDHG 251
>gi|228474239|ref|ZP_04058974.1| argininosuccinate synthase [Staphylococcus hominis SK119]
gi|228271598|gb|EEK12945.1| argininosuccinate synthase [Staphylococcus hominis SK119]
Length = 400
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+L +SGG D+S + W +D+ V + D G
Sbjct: 1 MKDKIVLAYSGGLDTSVAVKWLIDKGYDVVAVCLDVG 37
>gi|21227320|ref|NP_633242.1| GMP synthase subunit B [Methanosarcina mazei Go1]
gi|44887898|sp|Q8PXK0|GUAAB_METMA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
AltName: Full=GMP synthetase
gi|20905674|gb|AAM30914.1| GMP synthase [Methanosarcina mazei Go1]
Length = 305
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYG 43
K A++ SGG DSS C A DR++ + D G
Sbjct: 20 KDGKAIIALSGGVDSSVCAELAYRAIGDRLQPIYIDTG 57
>gi|88707054|ref|ZP_01104750.1| glutamine-dependent NAD+ synthetase [Congregibacter litoralis KT71]
gi|88698704|gb|EAQ95827.1| glutamine-dependent NAD+ synthetase [Congregibacter litoralis KT71]
Length = 540
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQR----NKVEL 50
M D + K PS +L SGG DS+ L+ A+D + F Y + E
Sbjct: 272 MRDYVNKNGFPSVVLGLSGGVDSALTLAVAVDALGASRVEAVMMPFRYTSDISIADAAEQ 331
Query: 51 ECRLCVRKKIVELMPKWKDSLGE 73
L VR ++ + P ++ L
Sbjct: 332 SATLGVRHSVISIEPIYESFLAA 354
>gi|317476539|ref|ZP_07935786.1| tRNA(Ile)-lysidine synthetase [Bacteroides eggerthii 1_2_48FAA]
gi|316907282|gb|EFV28989.1| tRNA(Ile)-lysidine synthetase [Bacteroides eggerthii 1_2_48FAA]
Length = 370
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/198 (12%), Positives = 54/198 (27%), Gaps = 45/198 (22%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ SGG DS L E C +R K + +
Sbjct: 19 TDKVIIALSGGADSVALLCLLQTLGYNCEAAH------------CNFHLRGKESDRDEAF 66
Query: 68 KDSLGEDHILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFV-PGRNIIFLVFAATLAYR 125
L +PL I+ + ++ +++++++ L + R +
Sbjct: 67 VCQLCAKRQVPLHIVHFNTVRTAEERHISIEMAARELRYEWFEEIR------------RK 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLK 176
G I + D + + + G + + PL+ L
Sbjct: 115 SGANVIAVAHHRDDS----------VETLLLNLIRGTGINGLRGIRPKNGHIVRPLLCLD 164
Query: 177 KYETWKLAQDIGGQDLVN 194
+ E G + +
Sbjct: 165 RKEIINYLNRTGQDYVTD 182
>gi|312795152|ref|YP_004028074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia rhizoxinica HKI 454]
gi|312166927|emb|CBW73930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC
2.1.1.61) [Burkholderia rhizoxinica HKI 454]
Length = 380
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 3 KQRVVIGMSGGVDSSVAAWLLKQQGYEVVGL 33
>gi|288933401|ref|YP_003437460.1| argininosuccinate synthase [Klebsiella variicola At-22]
gi|290511548|ref|ZP_06550917.1| argininosuccinate synthase [Klebsiella sp. 1_1_55]
gi|288888130|gb|ADC56448.1| argininosuccinate synthase [Klebsiella variicola At-22]
gi|289776541|gb|EFD84540.1| argininosuccinate synthase [Klebsiella sp. 1_1_55]
Length = 447
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S L W + + + GQ ++ + + K+ + D
Sbjct: 18 FSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAEGARLID 72
>gi|262368696|ref|ZP_06062025.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter johnsonii
SH046]
gi|262316374|gb|EEY97412.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter johnsonii
SH046]
Length = 377
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|227541810|ref|ZP_03971859.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Corynebacterium glucuronolyticum ATCC 51866]
gi|227182253|gb|EEI63225.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Corynebacterium glucuronolyticum ATCC 51866]
Length = 609
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 30/192 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ SGG DS+ + DR+ + D+G R R+++ E K
Sbjct: 311 RAICGLSGGVDSAVAAAIVQRAIGDRLTCVFVDHG-------LLRAGERQQVEEDFVKAT 363
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ A L ++ + + I + F +A L
Sbjct: 364 GAKLVTVDESEAFLSKLAGVTEPEAKRKAIGAEFIR------------SFERAVAGVLDG 411
Query: 129 TNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
++ V T YPD I++ L + + PL L K E
Sbjct: 412 QDVGFLVQGT---LYPDVVESGGGSGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEVR 468
Query: 182 KLAQDIGGQDLV 193
+ +++G +++
Sbjct: 469 AVGRELGLPEVI 480
>gi|226943322|ref|YP_002798395.1| glutamine-dependent NAD+ synthase [Azotobacter vinelandii DJ]
gi|226718249|gb|ACO77420.1| glutamine-dependent NAD+ synthase [Azotobacter vinelandii DJ]
Length = 556
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 10 SALLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
++L SGG DS+ L+ A+D +RVE + Y ++ LE + +
Sbjct: 298 KGVVLGLSGGIDSALTLAVAVDALGAERVEAVMMPYHYTAQMSLEDAEAEARAL 351
>gi|218130045|ref|ZP_03458849.1| hypothetical protein BACEGG_01630 [Bacteroides eggerthii DSM 20697]
gi|217987765|gb|EEC54092.1| hypothetical protein BACEGG_01630 [Bacteroides eggerthii DSM 20697]
Length = 426
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/198 (12%), Positives = 54/198 (27%), Gaps = 45/198 (22%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ SGG DS L E C +R K + +
Sbjct: 19 TDKVIIALSGGADSVALLCLLQTLGYNCEAAH------------CNFHLRGKESDRDEAF 66
Query: 68 KDSLGEDHILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFV-PGRNIIFLVFAATLAYR 125
L +PL I+ + ++ +++++++ L + R +
Sbjct: 67 VCQLCAKRQVPLHIVHFNTVRTAEERHISIEMAARELRYEWFEEIR------------RK 114
Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLK 176
G I + D + + + G + + PL+ L
Sbjct: 115 SGANVIAVAHHRDDS----------VETLLLNLIRGTGINGLRGIRPKNGHIVRPLLCLD 164
Query: 177 KYETWKLAQDIGGQDLVN 194
+ E G + +
Sbjct: 165 RKEIINYLNRTGQDYVTD 182
>gi|167580628|ref|ZP_02373502.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia thailandensis TXDOH]
Length = 386
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|115522064|ref|YP_778975.1| argininosuccinate synthase [Rhodopseudomonas palustris BisA53]
gi|122298193|sp|Q07VN9|ASSY_RHOP5 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|115516011|gb|ABJ03995.1| argininosuccinate synthase [Rhodopseudomonas palustris BisA53]
Length = 445
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1 MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
M+ I+K P + + FSGG D+S L W + RV + + GQ
Sbjct: 1 MSTILKSLPQGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQ 47
>gi|320531338|ref|ZP_08032310.1| asparagine synthase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320136429|gb|EFW28405.1| asparagine synthase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 506
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+ SGG DS W R ++F YG E+ V + +
Sbjct: 149 LVPLSGGLDSRLLAVWLKRHGAR-NVVTFTYGVPGSTEVAISRGVAEAL 196
>gi|314936819|ref|ZP_07844166.1| argininosuccinate synthase [Staphylococcus hominis subsp. hominis
C80]
gi|313655438|gb|EFS19183.1| argininosuccinate synthase [Staphylococcus hominis subsp. hominis
C80]
Length = 400
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+L +SGG D+S + W +D+ V + D G
Sbjct: 1 MKDKIVLAYSGGLDTSVAVKWLIDKGYDVVAVCLDVG 37
>gi|302388969|ref|YP_003824790.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
gi|302199597|gb|ADL07167.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
Length = 278
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 60/193 (31%), Gaps = 46/193 (23%)
Query: 5 IKKAPSALLLFSGGQDSS----TCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
IK ++ FSGG DS+ CL + V S Y R ELE + +K
Sbjct: 14 IKNLGRVVVAFSGGVDSTFLLKVCLDVLGKENVLAVTARSSTYPAR---ELEEARKLAEK 70
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
G +H + ++ DI S L V
Sbjct: 71 F-----------GANHEIIVSEELDIPGFSENPPERCYHCKKELFGKLV----------- 108
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLKK 177
+A G ++ G D + R + + + V +PL L K
Sbjct: 109 -AIARERGFNFVLDGSNMDDTGDF---RP----------GMRAKDELGVLSPLKEAGLTK 154
Query: 178 YETWKLAQDIGGQ 190
+ L++++G
Sbjct: 155 ADIRALSREMGLP 167
>gi|302385755|ref|YP_003821577.1| asparagine synthase (glutamine-hydrolyzing) [Clostridium
saccharolyticum WM1]
gi|302196383|gb|ADL03954.1| asparagine synthase (glutamine-hydrolyzing) [Clostridium
saccharolyticum WM1]
Length = 616
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Query: 15 FSGGQDS----STCLSWALDRFDRVETLSFD 41
SGG DS + C + + R+ T SFD
Sbjct: 268 LSGGVDSSLVSAVCAAELKKQGKRLTTFSFD 298
>gi|294788306|ref|ZP_06753549.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Simonsiella muelleri ATCC 29453]
gi|294483737|gb|EFG31421.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Simonsiella muelleri ATCC 29453]
Length = 363
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + + ++ SGG DSS + V +
Sbjct: 1 MYENQNIIVGLSGGVDSSVTAALLKQDGANVHGV 34
>gi|240138880|ref|YP_002963355.1| argininosuccinate synthase (citrulline-aspartate ligase)
[Methylobacterium extorquens AM1]
gi|240008852|gb|ACS40078.1| argininosuccinate synthase (citrulline-aspartate ligase)
[Methylobacterium extorquens AM1]
Length = 413
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 1 MND--IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
M+D K +L +SGG D+S L W + V T + D GQ ++E R
Sbjct: 1 MSDALPNKSVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEPARRKAEL 60
Query: 58 KKIVE---LMPKWKDSLGEDHILPL 79
I + ++ D++ P+
Sbjct: 61 LGIRPENIFIEDLREEFVRDYVFPM 85
>gi|261418420|ref|YP_003252102.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus sp. Y412MC61]
gi|319767620|ref|YP_004133121.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. Y412MC52]
gi|261374877|gb|ACX77620.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. Y412MC61]
gi|317112486|gb|ADU94978.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. Y412MC52]
Length = 371
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ KAP ++ SGG DSS ++ V +
Sbjct: 1 MNKAPHETRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|206579250|ref|YP_002236418.1| argininosuccinate synthase [Klebsiella pneumoniae 342]
gi|226729194|sp|B5XSX1|ASSY_KLEP3 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|206568308|gb|ACI10084.1| argininosuccinate synthase [Klebsiella pneumoniae 342]
Length = 447
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S L W + + + GQ ++ + + K+ + D
Sbjct: 18 FSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAEGARLID 72
>gi|152972095|ref|YP_001337241.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896678|ref|YP_002921423.1| argininosuccinate synthase [Klebsiella pneumoniae NTUH-K2044]
gi|262042729|ref|ZP_06015883.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329997772|ref|ZP_08302911.1| argininosuccinate synthase [Klebsiella sp. MS 92-3]
gi|166220986|sp|A6TEJ0|ASSY_KLEP7 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|150956944|gb|ABR78974.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549005|dbj|BAH65356.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259039954|gb|EEW41071.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328538906|gb|EGF64967.1| argininosuccinate synthase [Klebsiella sp. MS 92-3]
Length = 447
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S L W + + + GQ ++ + + K+ + D
Sbjct: 18 FSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAEGARLID 72
>gi|50084409|ref|YP_045919.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter sp. ADP1]
gi|73919892|sp|Q6FCW2|MNMA_ACIAD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|49530385|emb|CAG68097.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter sp. ADP1]
Length = 377
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|34541632|ref|NP_906111.1| hypothetical protein PG2046 [Porphyromonas gingivalis W83]
gi|61216584|sp|Q7MTC4|TILS_PORGI RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|34397950|gb|AAQ67010.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
Length = 454
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 37/130 (28%), Gaps = 22/130 (16%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
L+ SGG DS L + ++ R E V + +L
Sbjct: 27 LVALSGGADSVALLCVLRELGYETVAAHCNFHLRGVESDEDAAFVERLCRDLDVPL---- 82
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
H + + + +++++++ L + L L I +
Sbjct: 83 ---HRIDFDTV----RYARERSISIEMAARELRYEWF-----------GQLRKELAIEYV 124
Query: 132 VIGVCETDYS 141
+ D +
Sbjct: 125 AVAHHADDNA 134
>gi|21282193|ref|NP_645281.1| hypothetical protein MW0464 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485373|ref|YP_042594.1| hypothetical protein SAS0466 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297207388|ref|ZP_06923827.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300910347|ref|ZP_07127800.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Staphylococcus aureus subsp. aureus TCH70]
gi|61217254|sp|Q6GBX9|TILS_STAAS RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|61217380|sp|Q8NXZ4|TILS_STAAW RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|21203629|dbj|BAB94329.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|49243816|emb|CAG42241.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|296887951|gb|EFH26845.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300888336|gb|EFK83523.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Staphylococcus aureus subsp. aureus TCH70]
Length = 431
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEVYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLD 85
>gi|318042580|ref|ZP_07974536.1| PP family ATPase [Synechococcus sp. CB0101]
Length = 287
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ P+AL+ +SGG DS+ + A ++ + ++ + + E
Sbjct: 28 RQPAALVAYSGGVDSALVAAIAAEQLGAQALAIT-----------GVSPALAPHLREEAQ 76
Query: 66 KWKDSLGEDHI-LPLAILGDISHSSLTKN 93
+G +H + + L D ++SS +
Sbjct: 77 LQAQWMGIEHREIATSELNDPAYSSNPAD 105
>gi|325109609|ref|YP_004270677.1| asparagine synthase [Planctomyces brasiliensis DSM 5305]
gi|324969877|gb|ADY60655.1| asparagine synthase [Planctomyces brasiliensis DSM 5305]
Length = 611
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+L SGG DS + ++ + G+ E+ V +
Sbjct: 239 VLLSGGLDSRLMAAHLKEQGFEFTATTL--GKSTDFEVRGARQVAAAL 284
>gi|296119548|ref|ZP_06838106.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium ammoniagenes DSM 20306]
gi|295967431|gb|EFG80698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium ammoniagenes DSM 20306]
Length = 361
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS + A++ V +
Sbjct: 2 RVLVAMSGGVDSSVAAARAVEAGHEVVGVH 31
>gi|260438547|ref|ZP_05792363.1| argininosuccinate synthase [Butyrivibrio crossotus DSM 2876]
gi|292809136|gb|EFF68341.1| argininosuccinate synthase [Butyrivibrio crossotus DSM 2876]
Length = 407
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
A +L +SGG D++ + W + + V + GQ +++E L+ R +
Sbjct: 1 MADKVVLAYSGGLDTTAIIPWLKETYGYDVICCCVNVGQESELEGLDERAKYSGAEKLYI 60
Query: 65 PKWKDSLGEDHILP 78
D L +++I+P
Sbjct: 61 EDVVDELCDEYIMP 74
>gi|172040081|ref|YP_001799795.1| GMP synthase [Corynebacterium urealyticum DSM 7109]
gi|171851385|emb|CAQ04361.1| GMP synthase [Corynebacterium urealyticum DSM 7109]
Length = 523
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 36/206 (17%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELECRL 54
+ + I + A+ SGG DS+ + DR+ + D+ G+R +VE +
Sbjct: 212 VREQIGEDGRAICGLSGGVDSAVAAAIVQRAVGDRLTCVFVDHGLLRAGEREQVENDFVA 271
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
K+V + + D + + ++
Sbjct: 272 ATGAKLVTVDEREAFLKRLDGVTDPEAKRKAIGAEFIRSFER------------------ 313
Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVT 167
A LA + + V T YPD I++ L +
Sbjct: 314 --AVAGVLADSPEGSTVDFLVQGT---LYPDVVESGGGSGTANIKSHHNVGGLPDDVEFK 368
Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLV 193
+ PL L K E + +++G +++
Sbjct: 369 LVEPLRQLFKDEVRAVGRELGLPEII 394
>gi|116328677|ref|YP_798397.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116330666|ref|YP_800384.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
gi|122281579|sp|Q04TZ4|MNMA_LEPBJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|122283538|sp|Q04ZN1|MNMA_LEPBL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|116121421|gb|ABJ79464.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116124355|gb|ABJ75626.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
Length = 377
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 42/132 (31%), Gaps = 14/132 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-VRKKIVELMPKWK 68
++ SGG DS+ ++ V ++ E E +C KK +
Sbjct: 5 KIIVAMSGGVDSAVTAGLLMEEGYEVIGVNLR-----TWEYEAPVCDTTKKSCCSPEDIR 59
Query: 69 DSLGEDHILPLAI----LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-- 122
D+ L + + + + Q PN V N F+ F A
Sbjct: 60 DARDVGLSLKIPFYVVKMEKVFQEKVIDRFIDDYQHGKTPNPCVEC-NT-FVKFGALFEK 117
Query: 123 AYRLGITNIVIG 134
A LGI I G
Sbjct: 118 AKALGIDKIATG 129
>gi|27378891|ref|NP_770420.1| NAD synthetase [Bradyrhizobium japonicum USDA 110]
gi|27352040|dbj|BAC49045.1| NAD synthetase [Bradyrhizobium japonicum USDA 110]
Length = 585
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 13 LLF--SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L SGG DS+ C + A+D L D Q + V L R I +
Sbjct: 296 VLLGISGGIDSALCAAIAVD------ALGAD--QVHGVMLPYRYTAASSIADAGELAGHL 347
Query: 71 LGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNL 103
+LP+A + S + KN+ I + NL
Sbjct: 348 GIRYEVLPIAEAVTGFETILSGIFKNLPPDITEENL 383
>gi|332162672|ref|YP_004299249.1| NAD synthetase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|318606778|emb|CBY28276.1| nad synthetase; Glutamine amidotransferase chain of NAD synthetase
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325666902|gb|ADZ43546.1| NAD synthetase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 540
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ L+ A+D D+V+ L F Y + + K+ E++
Sbjct: 283 AVLGLSGGIDSALTLAIAVDALGKDKVQALMMPFRY------TADISIADAKEEAEILGI 336
Query: 67 WKDSLGEDHILPLAILGDIS 86
D L + + A +G +S
Sbjct: 337 EFDVLSIEPMFD-AFMGQLS 355
>gi|325983111|ref|YP_004295513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrosomonas sp. AL212]
gi|325532630|gb|ADZ27351.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrosomonas sp. AL212]
Length = 359
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 3 KHRVIVGMSGGVDSSVAAYVLKQQGYDVVGL 33
>gi|254880932|ref|ZP_05253642.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 4_3_47FAA]
gi|294775009|ref|ZP_06740538.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides vulgatus PC510]
gi|319639940|ref|ZP_07994667.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 3_1_40A]
gi|254833725|gb|EET14034.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 4_3_47FAA]
gi|294451053|gb|EFG19524.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides vulgatus PC510]
gi|317388218|gb|EFV69070.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 3_1_40A]
Length = 375
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 16/89 (17%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQR------NK 47
+ + L+ SGG DSS ++ V ++ GQ
Sbjct: 1 MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDVPSRFSTPGQDEPDDVLEA 60
Query: 48 VELECRLCVRKKIVELMPKWKDSLGEDHI 76
L RL + + ++ ++K + + I
Sbjct: 61 RALAERLGIEHHVADVREEFKQIIVKHFI 89
>gi|188534099|ref|YP_001907896.1| tRNA-specific 2-thiouridylase MnmA [Erwinia tasmaniensis Et1/99]
gi|188029141|emb|CAO97013.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Erwinia tasmaniensis Et1/99]
Length = 369
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 1 MSNSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|123441385|ref|YP_001005372.1| NAD synthetase [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122088346|emb|CAL11137.1| putative glutamine-dependent NAD [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 540
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ L+ A+D D+V+ L F Y + + K+ E++
Sbjct: 283 AVLGLSGGIDSALTLAIAVDALGKDKVQALMMPFRY------TADISIADAKEEAEILGI 336
Query: 67 WKDSLGEDHILPLAILGDIS 86
D L + + A +G +S
Sbjct: 337 EFDVLSIEPMFD-AFMGQLS 355
>gi|88603465|ref|YP_503643.1| phosphoadenosine phosphosulfate reductase [Methanospirillum
hungatei JF-1]
gi|88188927|gb|ABD41924.1| phosphoadenosine phosphosulfate reductase [Methanospirillum
hungatei JF-1]
Length = 885
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDR 34
+K P+ + FSGG+DS+ L A
Sbjct: 217 MKDRPTVNVSFSGGKDSTAVLHLARKAGVE 246
>gi|88603458|ref|YP_503636.1| hypothetical protein Mhun_2212 [Methanospirillum hungatei JF-1]
gi|88188920|gb|ABD41917.1| Protein of unknown function UPF0021 [Methanospirillum hungatei
JF-1]
Length = 309
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 55/151 (36%), Gaps = 38/151 (25%)
Query: 4 IIKKAPSAL-LLFSGGQDSSTCLSWALDRFDR----VETLSFD-----YGQ---RNKVEL 50
I K+ P L + FSGG+DS+ L + + L+ D Y Q R E
Sbjct: 44 ITKRLPKTLGVAFSGGKDSTALLKVLSEIRSEFPSSIIALTVDEGIEGYRQDTIRAATET 103
Query: 51 ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
L + +I+ + SL DH++ + + + + A+++
Sbjct: 104 CLTLRIPHEIIRFQDLYGHSL--DHLVSGSERNACTICGILRRRALEV------------ 149
Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYS 141
LA + IT I G + D++
Sbjct: 150 -----------LAQKHKITMIATGHNQDDHA 169
>gi|48478039|ref|YP_023745.1| putative ATPase [Picrophilus torridus DSM 9790]
gi|48430687|gb|AAT43552.1| putative ATPase [Picrophilus torridus DSM 9790]
Length = 208
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRV 35
A+ LFSGG+DS A+++ V
Sbjct: 2 KAVALFSGGKDSFLSAMIAMEQGFDV 27
>gi|57641218|ref|YP_183696.1| ATPase [Thermococcus kodakarensis KOD1]
gi|57159542|dbj|BAD85472.1| predicted ATPase, PP-loop superfamily [Thermococcus kodakarensis
KOD1]
Length = 215
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVELMPKWKD 69
L+SGG+DSS V ++ +G + E RL +I++L + +
Sbjct: 7 LYSGGKDSSLAAWILAKLGYEVRLVTVTFGTLDNWKYAEETARRLGFEHEILKLSGEILE 66
Query: 70 SLGEDHILP 78
E +
Sbjct: 67 RAAEMAVED 75
>gi|238788204|ref|ZP_04631999.1| NAD+ synthase [Yersinia frederiksenii ATCC 33641]
gi|238723791|gb|EEQ15436.1| NAD+ synthase [Yersinia frederiksenii ATCC 33641]
Length = 540
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ L+ A+D D+V+ L F Y + + K+ E++
Sbjct: 283 AVLGLSGGIDSALTLAIAVDALGKDKVQALMMPFRY------TADISIADAKEEAEILGI 336
Query: 67 WKDSLGEDHILPLAILGDIS 86
D L + + A +G +S
Sbjct: 337 EFDVLSIEPMFD-AFMGQLS 355
>gi|69244797|ref|ZP_00603021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium DO]
gi|257879151|ref|ZP_05658804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,230,933]
gi|257882042|ref|ZP_05661695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,231,502]
gi|257883775|ref|ZP_05663428.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,231,501]
gi|257889981|ref|ZP_05669634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,231,410]
gi|258615538|ref|ZP_05713308.1| tRNA-specific 2-thiouridylase MnmA [Enterococcus faecium DO]
gi|260560202|ref|ZP_05832379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium C68]
gi|293553765|ref|ZP_06674382.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1039]
gi|293563497|ref|ZP_06677945.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1162]
gi|293569057|ref|ZP_06680369.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1071]
gi|293571269|ref|ZP_06682303.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E980]
gi|294622809|ref|ZP_06701763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium U0317]
gi|314947767|ref|ZP_07851174.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0082]
gi|68196151|gb|EAN10581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium DO]
gi|257813379|gb|EEV42137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,230,933]
gi|257817700|gb|EEV45028.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,231,502]
gi|257819613|gb|EEV46761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,231,501]
gi|257826341|gb|EEV52967.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,231,410]
gi|260073769|gb|EEW62094.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium C68]
gi|291588238|gb|EFF20074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1071]
gi|291597767|gb|EFF28905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium U0317]
gi|291602058|gb|EFF32293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1039]
gi|291604499|gb|EFF33985.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1162]
gi|291608676|gb|EFF37964.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E980]
gi|313645747|gb|EFS10327.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0082]
Length = 373
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|332158432|ref|YP_004423711.1| hypothetical protein PNA2_0791 [Pyrococcus sp. NA2]
gi|331033895|gb|AEC51707.1| hypothetical protein PNA2_0791 [Pyrococcus sp. NA2]
Length = 217
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVELMPKWKD 69
LFSGG+DSS V ++ +G + E L +++EL D
Sbjct: 26 LFSGGKDSSLAAWLLNKIGYEVRLVTITFGTLDNWKYARETARILGFEHEVIELPKSILD 85
Query: 70 SLGEDHILP 78
E I
Sbjct: 86 RAVEMCIQD 94
>gi|327439665|dbj|BAK16030.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Solibacillus silvestris StLB046]
Length = 372
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V +
Sbjct: 11 RVVIGMSGGVDSSVAAYLLKQQGYDVIGI 39
>gi|315230856|ref|YP_004071292.1| ATPase [Thermococcus barophilus MP]
gi|315183884|gb|ADT84069.1| ATPase [Thermococcus barophilus MP]
Length = 201
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKD 69
L+SGG+DSS V+ ++ +G + E RL ++V L + +
Sbjct: 6 LYSGGKDSSLAAWILQKLGYEVKLVTISFGLLDNWKYAKETADRLGFNHEVVVLGREILE 65
Query: 70 SLGEDHILP 78
E I
Sbjct: 66 EAAEMCIRD 74
>gi|291613422|ref|YP_003523579.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sideroxydans lithotrophicus ES-1]
gi|291583534|gb|ADE11192.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sideroxydans lithotrophicus ES-1]
Length = 361
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS ++ V L
Sbjct: 4 NRKITVVVGMSGGVDSSVTALLLKEQGYEVIGL 36
>gi|254796826|ref|YP_003081663.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neorickettsia risticii str. Illinois]
gi|254590056|gb|ACT69418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neorickettsia risticii str. Illinois]
Length = 368
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSST ++ +V ++
Sbjct: 17 KVMVAMSGGVDSSTVAAYLHRAGYKVIGVT 46
>gi|150865036|ref|XP_001384086.2| hypothetical protein PICST_31371 [Scheffersomyces stipitis CBS
6054]
gi|149386292|gb|ABN66057.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 484
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 18/78 (23%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVE--------TLSFDYGQRNKVELECRLCVRKK 59
L+ SGG DS CL++ L ++ R+ ++ D+G R+ E K
Sbjct: 23 PSRVLVALSGGVDSI-CLTYLLSQYSRLYCNNAIAINAITIDHGYRSGSNEE-----AKA 76
Query: 60 IVELMPKWKDSLGEDHIL 77
+ +L+ KW G HI+
Sbjct: 77 VGKLVEKW----GVQHIV 90
>gi|138896133|ref|YP_001126586.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus
thermodenitrificans NG80-2]
gi|196250086|ref|ZP_03148780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. G11MC16]
gi|166234855|sp|A4IR87|MNMA_GEOTN RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|134267646|gb|ABO67841.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus thermodenitrificans NG80-2]
gi|196210270|gb|EDY05035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. G11MC16]
Length = 371
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ KAP ++ SGG DSS ++ V +
Sbjct: 1 MNKAPHETRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|260905764|ref|ZP_05914086.1| sulfate adenylyltransferase subunit 2 [Brevibacterium linens BL2]
Length = 314
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
+LLFSGG+DS T L A F
Sbjct: 42 EKPVLLFSGGKDSVTVLHLAAKAF 65
>gi|56421098|ref|YP_148416.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus kaustophilus
HTA426]
gi|81557817|sp|Q5KWT8|MNMA2_GEOKA RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
gi|56380940|dbj|BAD76848.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Geobacillus kaustophilus HTA426]
Length = 371
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ KAP ++ SGG DSS ++ V +
Sbjct: 1 MNKAPHETRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|119357892|ref|YP_912536.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium phaeobacteroides DSM 266]
gi|205813544|sp|A1BI85|MNMA_CHLPD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|119355241|gb|ABL66112.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium phaeobacteroides DSM 266]
Length = 357
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ ++ SGG DS+ + + RV L+
Sbjct: 1 MTETVVVGISGGVDSAVAACLLMKQGYRVLGLNIR 35
>gi|71003538|ref|XP_756435.1| hypothetical protein UM00288.1 [Ustilago maydis 521]
gi|46096040|gb|EAK81273.1| hypothetical protein UM00288.1 [Ustilago maydis 521]
Length = 484
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE 51
+K ++ SGG DSS + +E + RN EL+
Sbjct: 82 QKGERVVVALSGGVDSSVTAALLAQADFDLEAVFM----RNWNELD 123
>gi|330504227|ref|YP_004381096.1| tRNA(Ile)-lysidine synthetase [Pseudomonas mendocina NK-01]
gi|328918513|gb|AEB59344.1| tRNA(Ile)-lysidine synthetase [Pseudomonas mendocina NK-01]
Length = 440
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 38/131 (29%)
Query: 15 FSGGQDSSTCLSW--ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
FSGG DSS L A R++ + LS + V + W +
Sbjct: 25 FSGGLDSSVLLHLLAAWARYEELPALS-------------AIHVHHGLQPAADGWPEHCA 71
Query: 73 EDHI---LPLAILG-DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ +PL I+ ++ + + A +++ A A RLG
Sbjct: 72 QVCTRLGIPLDIVRVQVAPGASLEQAARRVRY-------------------AAFAERLGS 112
Query: 129 TNIVIGVCETD 139
+++G D
Sbjct: 113 GEVLLGAQHRD 123
>gi|328554370|gb|AEB24862.1| tRNA-specific 2-thiouridylase MnmA [Bacillus amyloliquefaciens
TA208]
Length = 371
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++K P ++ SGG DSS ++ V +
Sbjct: 1 MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|308174451|ref|YP_003921156.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Bacillus amyloliquefaciens DSM 7]
gi|307607315|emb|CBI43686.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Bacillus amyloliquefaciens DSM 7]
gi|328912774|gb|AEB64370.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Bacillus amyloliquefaciens LL3]
Length = 371
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++K P ++ SGG DSS ++ V +
Sbjct: 1 MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|299769236|ref|YP_003731262.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter sp. DR1]
gi|298699324|gb|ADI89889.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter sp. DR1]
Length = 377
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|293609749|ref|ZP_06692051.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828201|gb|EFF86564.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 377
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|294650884|ref|ZP_06728231.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter haemolyticus ATCC 19194]
gi|292823302|gb|EFF82158.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter haemolyticus ATCC 19194]
Length = 377
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|262372981|ref|ZP_06066260.1| tRNA methyl transferase [Acinetobacter junii SH205]
gi|262313006|gb|EEY94091.1| tRNA methyl transferase [Acinetobacter junii SH205]
Length = 377
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|261208073|ref|ZP_05922748.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TC 6]
gi|289565497|ref|ZP_06445945.1| tRNA methyl transferase [Enterococcus faecium D344SRF]
gi|294615054|ref|ZP_06694941.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1636]
gi|294617680|ref|ZP_06697306.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1679]
gi|314938375|ref|ZP_07845666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133a04]
gi|314942298|ref|ZP_07849146.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133C]
gi|314951434|ref|ZP_07854484.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133A]
gi|314993154|ref|ZP_07858539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133B]
gi|314996038|ref|ZP_07861116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133a01]
gi|260077657|gb|EEW65373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TC 6]
gi|289162695|gb|EFD10547.1| tRNA methyl transferase [Enterococcus faecium D344SRF]
gi|291592089|gb|EFF23711.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1636]
gi|291596054|gb|EFF27321.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium E1679]
gi|313589792|gb|EFR68637.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133a01]
gi|313592331|gb|EFR71176.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133B]
gi|313596391|gb|EFR75236.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133A]
gi|313598915|gb|EFR77760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133C]
gi|313642273|gb|EFS06853.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX0133a04]
Length = 373
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|253683532|ref|NP_001156660.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Bos
taurus]
gi|296486862|gb|DAA28975.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Bos
taurus]
Length = 417
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ A + SGG DS+ R +V +
Sbjct: 1 MQVARHVVCAVSGGVDSAVAALLLRRRGYQVTGV 34
>gi|227502055|ref|ZP_03932104.1| tRNA(Ile)-lysidine synthetase [Corynebacterium accolens ATCC 49725]
gi|227077210|gb|EEI15173.1| tRNA(Ile)-lysidine synthetase [Corynebacterium accolens ATCC 49725]
Length = 297
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 24/176 (13%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVE-LECRLCVRKKIVELMPKWKDSLG 72
SGG DS + + V L D+G Q E E + + +
Sbjct: 9 LSGGADSLALCAAMIAEGHDVIALCVDHGLQDGSREQAEKAAWQAESLGARARVLVVRVP 68
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
E+ L ++ + + ++ +++ R L A ++
Sbjct: 69 EE---AGNSLEAVARQARYQAMSAAAREDGASR-----RGGGPLEIAVAHTADDQAETLL 120
Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
+G +G P E A+ G V P + +++ +T ++G
Sbjct: 121 LGALRGRVAGMP----------ERAVVEG----ARVVRPFLQVRRADTEGACAELG 162
>gi|226951365|ref|ZP_03821829.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter sp. ATCC 27244]
gi|226837887|gb|EEH70270.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter sp. ATCC 27244]
Length = 377
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|217966619|ref|YP_002352125.1| NAD+ synthetase [Dictyoglomus turgidum DSM 6724]
gi|217335718|gb|ACK41511.1| NAD+ synthetase [Dictyoglomus turgidum DSM 6724]
Length = 526
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD----YGQRNKVE----L 50
+ D IKK+ A++ SGG DS+ A + L Y R +E L
Sbjct: 262 VRDFIKKSGFQKAVIGLSGGIDSALVACIAREALGEENVLGVSLPSIYTSRESIEDAEKL 321
Query: 51 ECRLCVRKKIVELMPKWKDSLGE 73
L + +I+ + + L E
Sbjct: 322 SKNLGIEFRIIPISDIFYSYLKE 344
>gi|170077022|ref|YP_001733660.1| hypothetical protein SYNPCC7002_A0394 [Synechococcus sp. PCC 7002]
gi|169884691|gb|ACA98404.1| conserved hypothetical protein, TIGR00268 [Synechococcus sp. PCC
7002]
Length = 288
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 74/236 (31%), Gaps = 42/236 (17%)
Query: 8 APSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
AL+ +SGG DS+ A D DR ++ ELE + K I + +
Sbjct: 17 TERALIAYSGGIDSTLVAKVAHDVLGDRAVAVTAVSPSLLPEELEAAIAQAKTIGIVHEQ 76
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
E H + +S+ + + L LA
Sbjct: 77 V-----ETHEMDNPNY--VSNPANRCYFCKSELHDTLKP----------------LALER 113
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
G ++ GV D Y R I+ A G S + + + K E ++++
Sbjct: 114 GYPYVIDGVNADDLQDY---RPG----IQAAKERGARSPLA----EVGIAKLEVREISKQ 162
Query: 187 IGGQDLVNLILEESHTC---YLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
+G + + + Y E C YLR+ GW + + Q
Sbjct: 163 LGLPWW-DKPAQPCLSSRFPY--GELITTEKLQRVGRCEV-YLRRLGWRSLRVRSQ 214
>gi|154686891|ref|YP_001422052.1| tRNA-specific 2-thiouridylase MnmA [Bacillus amyloliquefaciens
FZB42]
gi|166234844|sp|A7Z745|MNMA_BACA2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|154352742|gb|ABS74821.1| TrmU [Bacillus amyloliquefaciens FZB42]
Length = 371
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++K P ++ SGG DSS ++ V +
Sbjct: 1 MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|82750216|ref|YP_415957.1| hypothetical protein SAB0458 [Staphylococcus aureus RF122]
gi|82655747|emb|CAI80146.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 431
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCEGHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLN 85
>gi|116747512|ref|YP_844199.1| argininosuccinate synthase [Syntrophobacter fumaroxidans MPOB]
gi|166221026|sp|A0LEB2|ASSY_SYNFM RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|116696576|gb|ABK15764.1| argininosuccinate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 401
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELMPK 66
+L +SGG D+S L W ++ + V S D GQ +++ LE + + +
Sbjct: 4 KKVVLAYSGGLDTSIILKWLIESYGCEVVAFSADLGQAEELDGLEAKALATGAVKARIVD 63
Query: 67 WKDSLGEDHILP 78
++ D + P
Sbjct: 64 LREEFVRDFVFP 75
>gi|326798455|ref|YP_004316274.1| argininosuccinate synthase [Sphingobacterium sp. 21]
gi|326549219|gb|ADZ77604.1| argininosuccinate synthase [Sphingobacterium sp. 21]
Length = 395
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L FSGG D S + + D V ++ + G ++ EL+ ++
Sbjct: 1 MKKKVVLAFSGGLDTSFCAIYLSKDMGLEVHSVIVNTGGFSEDELKQIETRAYELGVASH 60
Query: 66 KWKDS 70
D
Sbjct: 61 ATVDE 65
>gi|325122971|gb|ADY82494.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter calcoaceticus PHEA-2]
Length = 377
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|298693839|gb|ADI97061.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp.
aureus ED133]
Length = 431
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLN 85
>gi|282915827|ref|ZP_06323595.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
D139]
gi|283768944|ref|ZP_06341853.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
H19]
gi|282320318|gb|EFB50660.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
D139]
gi|283461125|gb|EFC08211.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
H19]
Length = 431
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLN 85
>gi|262376077|ref|ZP_06069308.1| tRNA methyl transferase [Acinetobacter lwoffii SH145]
gi|262309171|gb|EEY90303.1| tRNA methyl transferase [Acinetobacter lwoffii SH145]
Length = 379
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|254431212|ref|ZP_05044915.1| argininosuccinate synthase [Cyanobium sp. PCC 7001]
gi|197625665|gb|EDY38224.1| argininosuccinate synthase [Cyanobium sp. PCC 7001]
Length = 403
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELECRLCV 56
++ +A A+L +SGG D+S C+ + + + E ++F D GQ +++E R +
Sbjct: 1 MMGRAKKAVLAYSGGVDTSVCIPYLKNEWGVEEVITFAADLGQGDELEPIRRKAL 55
>gi|49482736|ref|YP_039960.1| hypothetical protein SAR0510 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257424621|ref|ZP_05601049.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427287|ref|ZP_05603688.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429924|ref|ZP_05606310.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
68-397]
gi|257432626|ref|ZP_05608988.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
E1410]
gi|257435530|ref|ZP_05611580.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
M876]
gi|282903095|ref|ZP_06310987.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
C160]
gi|282904884|ref|ZP_06312744.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907831|ref|ZP_06315669.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910147|ref|ZP_06317953.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913337|ref|ZP_06321128.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282918290|ref|ZP_06326030.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
C427]
gi|282923041|ref|ZP_06330727.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
C101]
gi|283957299|ref|ZP_06374757.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Staphylococcus
aureus subsp. aureus A017934/97]
gi|293500386|ref|ZP_06666238.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509325|ref|ZP_06668041.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
M809]
gi|293515913|ref|ZP_06670603.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|295427043|ref|ZP_06819680.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297591580|ref|ZP_06950217.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Staphylococcus aureus subsp. aureus MN8]
gi|61217256|sp|Q6GJG2|TILS_STAAR RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|49240865|emb|CAG39532.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257272648|gb|EEV04768.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275938|gb|EEV07406.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279440|gb|EEV10035.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
68-397]
gi|257282491|gb|EEV12624.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
E1410]
gi|257285167|gb|EEV15284.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
M876]
gi|282314560|gb|EFB44947.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
C101]
gi|282317856|gb|EFB48225.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
C427]
gi|282322808|gb|EFB53128.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282325995|gb|EFB56301.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282328307|gb|EFB58582.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282332001|gb|EFB61510.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596521|gb|EFC01481.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
C160]
gi|283791223|gb|EFC30033.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Staphylococcus
aureus subsp. aureus A017934/97]
gi|290921321|gb|EFD98379.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|291096346|gb|EFE26606.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
58-424]
gi|291467870|gb|EFF10380.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
M809]
gi|295129046|gb|EFG58675.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575449|gb|EFH94166.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Staphylococcus aureus subsp. aureus MN8]
gi|312436401|gb|ADQ75472.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Staphylococcus aureus subsp. aureus TCH60]
gi|315193871|gb|EFU24265.1| hypothetical protein CGSSa00_12597 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 431
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEARFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLN 85
>gi|31542641|ref|NP_060476.2| mitochondrial tRNA-specific 2-thiouridylase 1 [Homo sapiens]
gi|8134740|sp|O75648|MTU1_HUMAN RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1;
AltName: Full=MTO2 homolog
gi|4469186|emb|CAB38414.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Homo
sapiens]
gi|17149283|gb|AAL35970.1| 5-methylaminomethyl-2-thiouridylate-methyltransferase [Homo
sapiens]
gi|17432490|gb|AAL38183.1| 5-methylaminomethyl-2-thiouridylate-methyltransferase [Homo
sapiens]
gi|54633233|dbj|BAD66875.1| mitochondrial tRNA-specific 2-thiouridylase 1 [Homo sapiens]
gi|119593828|gb|EAW73422.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase,
isoform CRA_a [Homo sapiens]
gi|158254860|dbj|BAF83401.1| unnamed protein product [Homo sapiens]
Length = 421
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|284161871|ref|YP_003400494.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
gi|284011868|gb|ADB57821.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
Length = 290
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
I+K + L+ SGG+DS+ + +E D G
Sbjct: 42 ILKSSEKILVCVSGGKDSTAMAYALNELDYNIELFHIDLG 81
>gi|269128442|ref|YP_003301812.1| GMP synthase large subunit [Thermomonospora curvata DSM 43183]
gi|268313400|gb|ACY99774.1| GMP synthase, large subunit [Thermomonospora curvata DSM 43183]
Length = 527
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 15/110 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE-------CRLCVRKKI 60
A+ SGG DS+ + R+ + D+G K E E V+ +
Sbjct: 223 KRAICGLSGGVDSAVAAALVQRAIGSRLTCVFVDHGLLRKGEAEQVEKDFVAATGVQLHV 282
Query: 61 VELMPKWKDSLG-------EDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
V+ ++ +L + I+ + ++ A +D+++
Sbjct: 283 VDAQERFLSALAGVTDPETKRKIIGREFIRVFEQAAREIVAAHSGEDDDV 332
>gi|256824827|ref|YP_003148787.1| tRNA-specific 2-thiouridylase MnmA [Kytococcus sedentarius DSM
20547]
gi|256688220|gb|ACV06022.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Kytococcus sedentarius DSM 20547]
Length = 416
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 3/97 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKWK 68
+ SGG DS+ + +D V + Q + E R C + +
Sbjct: 16 RVVAAMSGGVDSAVAAARMIDAGHEVTGVHLALSQSAETLRESARGCCTLEDAGDARRVA 75
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
D+LG + + + + ++ + + PN
Sbjct: 76 DALGIPFYV--WDMAERFRRDVIEDFVAEYEAGRTPN 110
>gi|195034678|ref|XP_001988949.1| GH10300 [Drosophila grimshawi]
gi|193904949|gb|EDW03816.1| GH10300 [Drosophila grimshawi]
Length = 693
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG 43
LLL SGG DSS C + ++ + D G
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALHPSQIIAVHVDNG 265
>gi|332970488|gb|EGK09478.1| NAD synthetase [Psychrobacter sp. 1501(2011)]
Length = 557
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D D+V + Y +++ LE +++
Sbjct: 296 EGVIVGLSGGIDSALTLCIAVDALGSDKVYAVMMPYEYTSQISLEDAQAQARRL 349
>gi|262278275|ref|ZP_06056060.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter calcoaceticus
RUH2202]
gi|262258626|gb|EEY77359.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter calcoaceticus
RUH2202]
Length = 377
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|254822889|ref|ZP_05227890.1| asparagine synthase (glutamine-hydrolyzing) [Mycobacterium
intracellulare ATCC 13950]
Length = 652
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 284 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 331
>gi|261377622|ref|ZP_05982195.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria cinerea ATCC 14685]
gi|269146376|gb|EEZ72794.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Neisseria cinerea ATCC 14685]
Length = 367
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 40/139 (28%), Gaps = 16/139 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
MN + ++ SGG DSS + + +V + Q + + C K+
Sbjct: 1 MN-TTANTTNIIVGLSGGVDSSVTAALLKQQGYQVRGVFM---QNWEDDDNDEYCSIKQD 56
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI-----IF 115
D +G D + + + + PN V N F
Sbjct: 57 SFDAIAVADIVGID--IDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLC-NAEIKFKCF 113
Query: 116 LVFAATLAYRLGITNIVIG 134
L A G I G
Sbjct: 114 LD----YAIDQGADIIATG 128
>gi|212550361|ref|YP_002308678.1| tRNA(Ile)-lysidine synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548599|dbj|BAG83267.1| tRNA(Ile)-lysidine synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 447
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 51/186 (27%), Gaps = 41/186 (22%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS L + + ++ R C +K L+ +
Sbjct: 25 KIVVGVSGGVDSSVLLYILHHLGYKCQAAHCNFHLRGD-----ESCRDEKHAALLASSMN 79
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
+ L + +++++ L + L
Sbjct: 80 LVFFKKDFNTQYL------AQRNKISIEMAARVLRYKWFEY-----------LRQEQNAE 122
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---------SHVTVHTPLMWLKKYET 180
I + + D I + + G H + PL+ + + E
Sbjct: 123 VIAVAHHKGDN----------IETLLLNLVRGTGIRGLKGIRPKHGKIIRPLLDITRQEI 172
Query: 181 WKLAQD 186
+ A+D
Sbjct: 173 VQFAKD 178
>gi|169632892|ref|YP_001706628.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii SDF]
gi|229486328|sp|B0VUD6|MNMA_ACIBS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|169151684|emb|CAP00474.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii]
Length = 377
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|119945858|ref|YP_943538.1| PP-loop domain-containing protein [Psychromonas ingrahamii 37]
gi|205830618|sp|A1SWS4|TTCA_PSYIN RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|119864462|gb|ABM03939.1| PP-loop domain protein [Psychromonas ingrahamii 37]
Length = 309
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 47/147 (31%), Gaps = 37/147 (25%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++I++ ++ SGG+DS T L L EL + +I+
Sbjct: 32 NMIEEGDRVMVCLSGGKDSFTMLDILL-------------------ELRAAAPIHFEIIA 72
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG----------RN 112
+ K +HILP + + + I + +P G R
Sbjct: 73 VNLDQKQPDFPEHILPEYLQKLGVDYKIVEEDTYSIVQDKIPE----GKTTCSLCSRLRR 128
Query: 113 IIFLVFAATLAYRLGITNIVIGVCETD 139
I A LG T I +G D
Sbjct: 129 GILYRT----AKELGATKIALGHHRDD 151
>gi|270285349|ref|ZP_06194743.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia muridarum Nigg]
gi|270289365|ref|ZP_06195667.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia muridarum Weiss]
gi|301336746|ref|ZP_07224948.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia muridarum
MopnTet14]
gi|14195289|sp|Q9PKA7|MNMA_CHLMU RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 358
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETL 38
+ ++ SGG DSS + V L
Sbjct: 1 MRKTVIVAMSGGVDSSVVAYLLKKQGKYDVIGL 33
>gi|53804566|ref|YP_113570.1| argininosuccinate synthase [Methylococcus capsulatus str. Bath]
gi|68566238|sp|Q609X7|ASSY_METCA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|53758327|gb|AAU92618.1| argininosuccinate synthase [Methylococcus capsulatus str. Bath]
Length = 408
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPK 66
L +SGG D+S L W + + V T + D GQ +VE + E+ +
Sbjct: 7 KKVALAYSGGLDTSVILKWLQETYGCEVVTFTADLGQGEEVEPARAKAQAMGVKEIYIDD 66
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D + P+ I ++
Sbjct: 67 LREEFSRDFVFPMFRANAIYEGEYLLGTSIA 97
>gi|15805701|ref|NP_294397.1| argininosuccinate synthase [Deinococcus radiodurans R1]
gi|24211538|sp|Q9RWJ4|ASSY_DEIRA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|6458375|gb|AAF10250.1|AE001924_3 arginosuccinate synthase [Deinococcus radiodurans R1]
Length = 402
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRK--KIVEL 63
+L +SGG D+S L W +R V + D GQ ++VE E R+ +
Sbjct: 2 SKEKIVLAYSGGLDTSIILKWLQTERNYDVVCFTADLGQGDEVE-EARVKALNTGAVAAY 60
Query: 64 MPKWKDSLGEDHILPL 79
++ D++ P+
Sbjct: 61 ALDLREEFVRDYVFPM 76
>gi|194337468|ref|YP_002019262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pelodictyon phaeoclathratiforme BU-1]
gi|194309945|gb|ACF44645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pelodictyon phaeoclathratiforme BU-1]
Length = 361
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ ++ SGG DS+ +++ V L+
Sbjct: 1 MSVQKKVVVGISGGVDSAVSACLLVEQGYAVTGLNIR 37
>gi|302692702|ref|XP_003036030.1| hypothetical protein SCHCODRAFT_84546 [Schizophyllum commune H4-8]
gi|300109726|gb|EFJ01128.1| hypothetical protein SCHCODRAFT_84546 [Schizophyllum commune H4-8]
Length = 594
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+L SGG DSS + A ++V ++ QR E+
Sbjct: 238 VLLSGGLDSSLIAAIAARETEKVAQAQYELRQRRLQEIAS 277
>gi|298387971|ref|ZP_06997519.1| GMP synthase, C- domain protein [Bacteroides sp. 1_1_14]
gi|298259237|gb|EFI02113.1| GMP synthase, C- domain protein [Bacteroides sp. 1_1_14]
Length = 435
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L + + + ++G
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGENLVCVHVNHG 176
>gi|291519700|emb|CBK74921.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Butyrivibrio fibrisolvens 16/4]
Length = 354
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
AL+ SGG DSS + + YG + + C V+
Sbjct: 2 KALIAMSGGVDSSVAALLMKENGYECIGCTMKLYGNEDVDLSDTSTCCSLDDVQDAKDVA 61
Query: 69 DSLGEDH 75
LG H
Sbjct: 62 RKLGMLH 68
>gi|228473260|ref|ZP_04058014.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga gingivalis
ATCC 33624]
gi|228275162|gb|EEK13960.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga gingivalis
ATCC 33624]
Length = 297
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCV 56
M ++ + LLFSGG+DS T + A+ F ++ + D G + R +
Sbjct: 15 MREVAAQFERPALLFSGGKDSITLVHLAIKAFAPMKIPFPLVHIDTGHNFPEAIAYRDAL 74
Query: 57 RKKIVELM 64
K+I +
Sbjct: 75 AKRIGAEL 82
>gi|220903573|ref|YP_002478885.1| thiamine biosynthesis protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867872|gb|ACL48207.1| thiamine biosynthesis protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 376
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
P + LFSGG DS + V L F
Sbjct: 2 STPDIIALFSGGLDSILAAKVLERQGLAVRCLHF 35
>gi|220927124|ref|YP_002502426.1| argininosuccinate synthase [Methylobacterium nodulans ORS 2060]
gi|219951731|gb|ACL62123.1| argininosuccinate synthase [Methylobacterium nodulans ORS 2060]
Length = 413
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK 58
M+D +K ++L +SGG D+S L W + V T + D GQ ++E R
Sbjct: 1 MSDKTQKRVQKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEPARRKAELL 60
Query: 59 KIVE---LMPKWKDSLGEDHILPL 79
I + ++ D++ P+
Sbjct: 61 GIKPENIFIEDLREEFVRDYVFPM 84
>gi|148244940|ref|YP_001219634.1| hypothetical protein COSY_0804 [Candidatus Vesicomyosocius
okutanii HA]
gi|146326767|dbj|BAF61910.1| conserved hypothetical protein [Candidatus Vesicomyosocius
okutanii HA]
Length = 348
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
+ K A+ L SGG DS LD+ VE ++F
Sbjct: 1 MTNKQIKAVSLISGGLDSLLSTKIILDQGIHVEGINF 37
>gi|146338275|ref|YP_001203323.1| tRNA(Ile)-lysidine synthase [Bradyrhizobium sp. ORS278]
gi|146191081|emb|CAL75086.1| tRNA(Ile)-lysidine synthase [Bradyrhizobium sp. ORS278]
Length = 367
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 11 ALLL-FSGGQDSSTCLS------WALDRFDRVETLSFDYGQRNKVELECRLCVR 57
AL+L SGG DS L AL R+ ++ D+G R + E + R
Sbjct: 35 ALVLAVSGGPDSMALLWLAARWRQALADGPRLVAITVDHGLRPEARREAAMVKR 88
>gi|83645146|ref|YP_433581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hahella chejuensis KCTC 2396]
gi|123533626|sp|Q2SJL8|MNMA_HAHCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|83633189|gb|ABC29156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Hahella chejuensis KCTC 2396]
Length = 364
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS VE L
Sbjct: 3 THRNQRVIVGISGGVDSSVSAYLLKALGYEVEGL 36
>gi|29347829|ref|NP_811332.1| putative GMP synthase [Bacteroides thetaiotaomicron VPI-5482]
gi|253572215|ref|ZP_04849619.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|44887958|sp|Q8A525|GUAA2_BACTN RecName: Full=Putative GMP synthase [glutamine-hydrolyzing] 2;
AltName: Full=GMP synthetase 2; AltName: Full=Glutamine
amidotransferase 2
gi|29339731|gb|AAO77526.1| putative GMP synthase, glutamine-hydrolyzing [Bacteroides
thetaiotaomicron VPI-5482]
gi|251838395|gb|EES66482.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 435
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L + + + ++G
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGENLVCVHVNHG 176
>gi|319945029|ref|ZP_08019291.1| argininosuccinate synthase [Lautropia mirabilis ATCC 51599]
gi|319741599|gb|EFV94024.1| argininosuccinate synthase [Lautropia mirabilis ATCC 51599]
Length = 443
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
FSGG D+S L W + + + GQ
Sbjct: 19 FSGGLDTSAALHWMRKKGAVPYAYTANLGQ 48
>gi|297529272|ref|YP_003670547.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. C56-T3]
gi|297252524|gb|ADI25970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacillus sp. C56-T3]
Length = 371
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ KAP ++ SGG DSS ++ V +
Sbjct: 1 MNKAPHETRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|295676665|ref|YP_003605189.1| argininosuccinate synthase [Burkholderia sp. CCGE1002]
gi|295436508|gb|ADG15678.1| argininosuccinate synthase [Burkholderia sp. CCGE1002]
Length = 443
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
FSGG D+S L W + + + GQ
Sbjct: 18 FSGGLDTSAALHWMRKKGAVPYAYTANLGQ 47
>gi|291286256|ref|YP_003503072.1| argininosuccinate synthase [Denitrovibrio acetiphilus DSM 12809]
gi|290883416|gb|ADD67116.1| argininosuccinate synthase [Denitrovibrio acetiphilus DSM 12809]
Length = 403
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 22/58 (37%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L +SGG D+S L W + V D GQ VE ++ V+
Sbjct: 3 KDKVVLAYSGGLDTSVILKWLQLKGYDVVAYVADLGQLPDVEAIREKAMQSGAVDFYA 60
>gi|209521300|ref|ZP_03270018.1| Argininosuccinate synthase [Burkholderia sp. H160]
gi|209498275|gb|EDZ98412.1| Argininosuccinate synthase [Burkholderia sp. H160]
Length = 444
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
FSGG D+S L W + + + GQ
Sbjct: 18 FSGGLDTSAALHWMRKKGAVPYAYTANLGQ 47
>gi|163737975|ref|ZP_02145391.1| Argininosuccinate synthase [Phaeobacter gallaeciensis BS107]
gi|163742629|ref|ZP_02150015.1| argininosuccinate synthase [Phaeobacter gallaeciensis 2.10]
gi|161384214|gb|EDQ08597.1| argininosuccinate synthase [Phaeobacter gallaeciensis 2.10]
gi|161388591|gb|EDQ12944.1| Argininosuccinate synthase [Phaeobacter gallaeciensis BS107]
Length = 408
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELEPARQKAELL 55
>gi|15602678|ref|NP_245750.1| argininosuccinate synthase [Pasteurella multocida subsp.
multocida str. Pm70]
gi|13431299|sp|P57877|ASSY_PASMU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|12721119|gb|AAK02897.1| ArgG [Pasteurella multocida subsp. multocida str. Pm70]
Length = 445
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 3/92 (3%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ K + FSGG D+S L W + + + GQ + E + +K +E
Sbjct: 7 QQLPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQ---PDEEDYNAIPRKAME 63
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
+ + L + I + +
Sbjct: 64 YGAENARLIDCRAQLAHEGIAAIQSGAFHIST 95
>gi|296129582|ref|YP_003636832.1| sulfate adenylyltransferase, small subunit [Cellulomonas
flavigena DSM 20109]
gi|296021397|gb|ADG74633.1| sulfate adenylyltransferase, small subunit [Cellulomonas
flavigena DSM 20109]
Length = 317
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF 32
M ++ + +LLFSGG+DS L A F
Sbjct: 37 MREVAGEFERPVLLFSGGKDSIVMLHLARKAF 68
>gi|254442762|ref|ZP_05056238.1| argininosuccinate synthase [Verrucomicrobiae bacterium DG1235]
gi|198257070|gb|EDY81378.1| argininosuccinate synthase [Verrucomicrobiae bacterium DG1235]
Length = 409
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 20/130 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVE-LECRLCVRKKIVELMPK 66
+L +SGG D ++ L L E ++F D GQ +++ LE +
Sbjct: 2 KIVLAYSGGLD-TSVLVRWLKDHYNAEIITFAADVGQEEELDGLEEKAKATGASAHYTLD 60
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYR 125
KD +D+I P+ I ++ + A LA +
Sbjct: 61 LKDEFAKDYIFPMLRANTIYEGQYYLGTSIARP---------------LIAKAHIDLARK 105
Query: 126 LGITNIVIGV 135
+G + G
Sbjct: 106 VGADAVAHGA 115
>gi|119485188|ref|ZP_01619573.1| argininosuccinate synthase [Lyngbya sp. PCC 8106]
gi|119457416|gb|EAW38541.1| argininosuccinate synthase [Lyngbya sp. PCC 8106]
Length = 400
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 15/132 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +A A+L +SGG D+S C+ + + F + V TL+ D GQ +++E
Sbjct: 1 MGRATKAVLAYSGGVDTSVCIPYLKNEFGVEGVITLAADLGQGDELE------------P 48
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+ K DS E+ ++ ++ + A +N P + R +I
Sbjct: 49 IKQKALDSGAEESLVIDVRERFVNEFAFPAIQANAFYENRYPLSTALARPLI-AQILVEA 107
Query: 123 AYRLGITNIVIG 134
A + G I G
Sbjct: 108 AEKYGADAIAHG 119
>gi|15896451|ref|NP_349800.1| cell cycle protein MesJ-like protein [Clostridium acetobutylicum
ATCC 824]
gi|61216713|sp|Q97EB0|TILS_CLOAB RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|15026275|gb|AAK81140.1|AE007816_4 Cell cycle protein MesJ ortholog, ATPase of the PP-loop superamily
[Clostridium acetobutylicum ATCC 824]
gi|325510609|gb|ADZ22245.1| ATPase of the PP-loop superamily [Clostridium acetobutylicum EA
2018]
Length = 461
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 31/102 (30%), Gaps = 8/102 (7%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVR 57
N +IK+ ++ SGG DS L D+ + + + + E
Sbjct: 12 NSMIKQNDRIVVAVSGGPDSICLLHILFKLKDKFNTSICAAHVN----HCIRGEAADKDE 67
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
+ + + K + I + SS ++
Sbjct: 68 EYVKKFCEKLDIQFYVKRVDVNKIAHEKKISSEMAGREIRYA 109
>gi|294055941|ref|YP_003549599.1| argininosuccinate synthase [Coraliomargarita akajimensis DSM 45221]
gi|293615274|gb|ADE55429.1| argininosuccinate synthase [Coraliomargarita akajimensis DSM 45221]
Length = 417
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 22/131 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKI---VELMP 65
+L +SGG D+S +SW + + + T + D GQ + EL+ K
Sbjct: 2 KIVLAYSGGLDTSVLVSWLKEHYSAEIITFAADVGQ--EEELDGLAEKAKATGASAHYTV 59
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAY 124
D D I P+ I ++ + A +A
Sbjct: 60 DLVDEFARDFIFPMMRANAIYEGQYLLGTSIARP---------------LISKAHVEIAE 104
Query: 125 RLGITNIVIGV 135
R G + G
Sbjct: 105 REGADAVAHGA 115
>gi|227485722|ref|ZP_03916038.1| PP-loop superfamily ATP-binding protein [Anaerococcus lactolyticus
ATCC 51172]
gi|227236277|gb|EEI86292.1| PP-loop superfamily ATP-binding protein [Anaerococcus lactolyticus
ATCC 51172]
Length = 277
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 50/147 (34%), Gaps = 30/147 (20%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWA---LDRFDRVETLSFDYGQRNKVELECRLCVR 57
M D++K +L FSGG DS+ L A + V + F + +L +
Sbjct: 12 MRDLLK--EKIVLAFSGGVDSALLLKIASSLRQNENDVVAMFFKAPSSTEEDLVNAKNLA 69
Query: 58 KKI-VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+++ V+L K D +DHI S A+ ++D
Sbjct: 70 EEMQVKLYIKDVDIFVDDHITNNEKDRCYHCKSHLFKQAIDLKDE--------------- 114
Query: 117 VFAATLAYRLGITNIVIGVCETDYSGY 143
LG ++ G D+ Y
Sbjct: 115 ---------LGYGYVIDGTNTDDHKVY 132
>gi|212703980|ref|ZP_03312108.1| hypothetical protein DESPIG_02033 [Desulfovibrio piger ATCC 29098]
gi|212672593|gb|EEB33076.1| hypothetical protein DESPIG_02033 [Desulfovibrio piger ATCC 29098]
Length = 354
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 7/77 (9%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-------QRNKVELECRL 54
+ + L+ SGG+DS + + V L D G R VE C
Sbjct: 93 QKLFTRDERILVALSGGKDSLALMLELSRQGYDVTGLHIDLGIPESSPVARGVVERFCAK 152
Query: 55 CVRKKIVELMPKWKDSL 71
K +V+ + ++
Sbjct: 153 HGLKLMVKELAAEGLAI 169
>gi|193212641|ref|YP_001998594.1| argininosuccinate synthase [Chlorobaculum parvum NCIB 8327]
gi|229889859|sp|B3QN91|ASSY_CHLP8 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|193086118|gb|ACF11394.1| Argininosuccinate synthase [Chlorobaculum parvum NCIB 8327]
Length = 401
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQR 45
+ K A+ SGG D+S + W D+++ + ++ + GQ+
Sbjct: 1 MSKEKIAVAY-SGGLDTSVMIKWLKDKYEGAEIVAVTGNLGQK 42
>gi|160936272|ref|ZP_02083645.1| hypothetical protein CLOBOL_01168 [Clostridium bolteae ATCC
BAA-613]
gi|158441082|gb|EDP18806.1| hypothetical protein CLOBOL_01168 [Clostridium bolteae ATCC
BAA-613]
Length = 424
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
+ I +L +SGG D++ + W + V D GQ
Sbjct: 10 QEDINMKEKVVLAYSGGLDTTAIIPWLKEHFGYEVICCCIDCGQ 53
>gi|195953926|ref|YP_002122216.1| tRNA(Ile)-lysidine synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|195933538|gb|ACG58238.1| tRNA(Ile)-lysidine synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 306
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 3 DIIKKAPSALLLFSGGQDSST--CLSWALDR--FDRVETLSFDYGQRNKVELECRLCV 56
++I+K L+ FSGG DS CL + L + F++ R + + C+
Sbjct: 15 NLIEKGDKILIGFSGGVDSMVLSCLMYKLKDALGIEIGLAHFNHHLREDADEDEAFCI 72
>gi|124026895|ref|YP_001016010.1| argininosuccinate synthase [Prochlorococcus marinus str. NATL1A]
gi|166221003|sp|A2C5I6|ASSY_PROM1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|123961963|gb|ABM76746.1| Argininosuccinate synthase [Prochlorococcus marinus str. NATL1A]
Length = 400
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQ 44
+ KA +L +SGG D+S C+ + + ++F D GQ
Sbjct: 1 MGKAKKVVLAYSGGVDTSVCIPYLKKEYGVEHVIAFAADLGQ 42
>gi|21673940|ref|NP_662005.1| argininosuccinate synthase [Chlorobium tepidum TLS]
gi|30172875|sp|Q8KDE0|ASSY_CHLTE RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|21647081|gb|AAM72347.1| argininosuccinate synthase [Chlorobium tepidum TLS]
Length = 401
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQR 45
+ K A+ SGG D+S + W D+++ + ++ + GQ+
Sbjct: 1 MSKEKIAVAY-SGGLDTSVMIKWLKDKYEGAEIVAVTGNLGQK 42
>gi|145225479|ref|YP_001136157.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Mycobacterium gilvum PYR-GCK]
gi|315445832|ref|YP_004078711.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. Spyr1]
gi|145217965|gb|ABP47369.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium gilvum PYR-GCK]
gi|315264135|gb|ADU00877.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. Spyr1]
Length = 522
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 17/113 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE---------CRL 54
A+ SGG DS+ + DR+ + D+ G+R +V+ + +
Sbjct: 219 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERAQVQRDFVAATGANLVTV 278
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
V + +E + + G+ I+ + + ++ + +++P F
Sbjct: 279 DVADRFLEALSGVTNPEGKRKIIGREFIRAFEGA--VRDTVERSDGSDVPVEF 329
>gi|319780688|ref|YP_004140164.1| argininosuccinate synthase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166576|gb|ADV10114.1| argininosuccinate synthase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 407
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
M+ K +L +SGG D+S L W F V T + D GQ ++E R
Sbjct: 1 MSK-TKDIKKVVLSYSGGLDTSIILKWLQTEFGAEVITFTADLGQGEELEPARRKAEMMG 59
Query: 60 IVEL 63
I ++
Sbjct: 60 IKDI 63
>gi|311069234|ref|YP_003974157.1| tRNA-specific 2-thiouridylase MnmA [Bacillus atrophaeus 1942]
gi|310869751|gb|ADP33226.1| tRNA-specific 2-thiouridylase MnmA [Bacillus atrophaeus 1942]
Length = 371
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++K P ++ SGG DSS ++ V +
Sbjct: 1 MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|296333160|ref|ZP_06875613.1| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675334|ref|YP_003867006.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296149358|gb|EFG90254.1| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413578|gb|ADM38697.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 371
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++K P ++ SGG DSS ++ V +
Sbjct: 1 MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|321312277|ref|YP_004204564.1| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis BSn5]
gi|291485158|dbj|BAI86233.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Bacillus subtilis subsp. natto BEST195]
gi|320018551|gb|ADV93537.1| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis BSn5]
Length = 371
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++K P ++ SGG DSS ++ V +
Sbjct: 1 MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|260187197|ref|ZP_05764671.1| asparagine synthetase asnB [Mycobacterium tuberculosis CPHL_A]
gi|289447829|ref|ZP_06437573.1| asparagine synthetase asnB [Mycobacterium tuberculosis CPHL_A]
gi|289420787|gb|EFD17988.1| asparagine synthetase asnB [Mycobacterium tuberculosis CPHL_A]
Length = 652
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 284 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 331
>gi|237711510|ref|ZP_04541991.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 9_1_42FAA]
gi|237726033|ref|ZP_04556514.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. D4]
gi|265752935|ref|ZP_06088504.1| tRNA methyl transferase [Bacteroides sp. 3_1_33FAA]
gi|229435841|gb|EEO45918.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides dorei
5_1_36/D4]
gi|229454205|gb|EEO59926.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. 9_1_42FAA]
gi|263236121|gb|EEZ21616.1| tRNA methyl transferase [Bacteroides sp. 3_1_33FAA]
Length = 351
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKIVEL 63
+ LL SGG DSS D V ++F Y + N E LE + +++
Sbjct: 5 EPNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKGNDTEYLEDARTLCERLGIP 64
Query: 64 MPKWKDSLGEDHILPLAILGDI 85
+ + + +
Sbjct: 65 HLTYDVRGTFRKTIIDYFINEY 86
>gi|298491152|ref|YP_003721329.1| queuosine synthesis-like protein ['Nostoc azollae' 0708]
gi|298233070|gb|ADI64206.1| Queuosine synthesis-like protein ['Nostoc azollae' 0708]
Length = 273
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 35/181 (19%)
Query: 11 ALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+ +SGG DS+ A D DR ++ + +++ + +
Sbjct: 20 ALIAYSGGVDSTLVAKIAYDLLGDRALAVT----------AVSPSLLPEELADATAQAAT 69
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
I+ + +++++S N + L +T N + L LG +
Sbjct: 70 IGIAHKIVQSHEMENLNYTSNPINR-CYFCKSELHDTL----NPLVL--------ELGYS 116
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
+V GV D Y R I+ A G S + + + K E +L+Q +G
Sbjct: 117 YVVDGVNADDLHDY---RPG----IQAAKERGARSPLA----EIGVTKAEVRQLSQQLGL 165
Query: 190 Q 190
Sbjct: 166 P 166
>gi|224023564|ref|ZP_03641930.1| hypothetical protein BACCOPRO_00267 [Bacteroides coprophilus DSM
18228]
gi|224016786|gb|EEF74798.1| hypothetical protein BACCOPRO_00267 [Bacteroides coprophilus DSM
18228]
Length = 378
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 20/86 (23%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQRNKVELECR 53
I K L+ SGG DSS ++ V ++ GQ E+
Sbjct: 2 TIHKDKRVLVGMSGGIDSSAVCIMLQEQGYEVVGVTMRTWDVPSHFSTPGQEQPDEVLEA 61
Query: 54 LCVRKKIVELMPKWKDSLGEDHILPL 79
+ ++ E H+ +
Sbjct: 62 QALAARLG----------IEHHVADV 77
>gi|221310688|ref|ZP_03592535.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus subtilis subsp. subtilis str. 168]
gi|221315011|ref|ZP_03596816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221319932|ref|ZP_03601226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus subtilis subsp. subtilis str. JH642]
gi|221324213|ref|ZP_03605507.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus subtilis subsp. subtilis str. SMY]
gi|255767628|ref|NP_390627.3| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis subsp.
subtilis str. 168]
gi|254763446|sp|O35020|MNMA_BACSU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|225185256|emb|CAB14691.3| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Bacillus subtilis subsp. subtilis str. 168]
Length = 371
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++K P ++ SGG DSS ++ V +
Sbjct: 1 MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|167564053|ref|ZP_02356969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Burkholderia oklahomensis EO147]
Length = 409
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V L
Sbjct: 3 KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGL 33
>gi|118618843|ref|YP_907175.1| asparagine synthetase AsnB [Mycobacterium ulcerans Agy99]
gi|118570953|gb|ABL05704.1| asparagine synthetase AsnB [Mycobacterium ulcerans Agy99]
Length = 664
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 20/48 (41%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + EL+ + I
Sbjct: 296 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSELDVAVASADAIGA 343
>gi|94496969|ref|ZP_01303543.1| ATPase [Sphingomonas sp. SKA58]
gi|94423645|gb|EAT08672.1| ATPase [Sphingomonas sp. SKA58]
Length = 314
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 10/63 (15%)
Query: 15 FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DS L A F RV ++ D+G R + E L R W + G
Sbjct: 34 VSGGPDSMALLCLAASAFPGRVAAVTVDHGLRRESADEAALVAR---------WCVAHGI 84
Query: 74 DHI 76
+H+
Sbjct: 85 EHV 87
>gi|15609338|ref|NP_216717.1| asparagine synthetase AsnB [Mycobacterium tuberculosis H37Rv]
gi|15841692|ref|NP_336729.1| asparagine synthetase, putative [Mycobacterium tuberculosis
CDC1551]
gi|31793380|ref|NP_855873.1| asparagine synthetase AsnB [Mycobacterium bovis AF2122/97]
gi|121638082|ref|YP_978306.1| putative asparagine synthetase AsnB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662018|ref|YP_001283541.1| putative asparagine synthetase [Mycobacterium tuberculosis H37Ra]
gi|148823408|ref|YP_001288162.1| asparagine synthetase asnB [Mycobacterium tuberculosis F11]
gi|167969406|ref|ZP_02551683.1| asparagine synthetase asnB [Mycobacterium tuberculosis H37Ra]
gi|215403591|ref|ZP_03415772.1| asparagine synthetase asnB [Mycobacterium tuberculosis 02_1987]
gi|215411926|ref|ZP_03420700.1| asparagine synthetase asnB [Mycobacterium tuberculosis 94_M4241A]
gi|215431135|ref|ZP_03429054.1| asparagine synthetase asnB [Mycobacterium tuberculosis EAS054]
gi|215446430|ref|ZP_03433182.1| asparagine synthetase asnB [Mycobacterium tuberculosis T85]
gi|224990576|ref|YP_002645263.1| putative asparagine synthetase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253798734|ref|YP_003031735.1| asparagine synthetase asnB [Mycobacterium tuberculosis KZN 1435]
gi|254232354|ref|ZP_04925681.1| asparagine synthetase asnB [Mycobacterium tuberculosis C]
gi|254364997|ref|ZP_04981043.1| asparagine synthetase asnB [Mycobacterium tuberculosis str.
Haarlem]
gi|260205498|ref|ZP_05772989.1| asparagine synthetase asnB [Mycobacterium tuberculosis K85]
gi|289554012|ref|ZP_06443222.1| asparagine synthetase asnB [Mycobacterium tuberculosis KZN 605]
gi|289574887|ref|ZP_06455114.1| asparagine synthetase asnB [Mycobacterium tuberculosis K85]
gi|289745474|ref|ZP_06504852.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289754309|ref|ZP_06513687.1| asparagine synthetase asnB [Mycobacterium tuberculosis EAS054]
gi|289758321|ref|ZP_06517699.1| asparagine synthetase AsnB [Mycobacterium tuberculosis T85]
gi|294993586|ref|ZP_06799277.1| asparagine synthase [Mycobacterium tuberculosis 210]
gi|297634790|ref|ZP_06952570.1| asparagine synthase [Mycobacterium tuberculosis KZN 4207]
gi|297731781|ref|ZP_06960899.1| asparagine synthase [Mycobacterium tuberculosis KZN R506]
gi|298525693|ref|ZP_07013102.1| asparagine synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|306776453|ref|ZP_07414790.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu001]
gi|306780230|ref|ZP_07418567.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu002]
gi|306784977|ref|ZP_07423299.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu003]
gi|306789344|ref|ZP_07427666.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu004]
gi|306793669|ref|ZP_07431971.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu005]
gi|306798060|ref|ZP_07436362.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu006]
gi|306803939|ref|ZP_07440607.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu008]
gi|306808511|ref|ZP_07445179.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu007]
gi|306968338|ref|ZP_07480999.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu009]
gi|306972565|ref|ZP_07485226.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu010]
gi|307080272|ref|ZP_07489442.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu011]
gi|307084862|ref|ZP_07493975.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu012]
gi|313659115|ref|ZP_07815995.1| asparagine synthase [Mycobacterium tuberculosis KZN V2475]
gi|54036788|sp|P64248|ASNH_MYCBO RecName: Full=Putative asparagine synthetase
[glutamine-hydrolyzing]
gi|54041014|sp|P64247|ASNH_MYCTU RecName: Full=Putative asparagine synthetase
[glutamine-hydrolyzing]
gi|1237054|emb|CAA94270.1| Probable asparagine synthetase AsnB [Mycobacterium tuberculosis
H37Rv]
gi|13881947|gb|AAK46543.1| asparagine synthetase, putative [Mycobacterium tuberculosis
CDC1551]
gi|31618972|emb|CAD97077.1| Probable asparagine synthetase AsnB [Mycobacterium bovis AF2122/97]
gi|121493730|emb|CAL72205.1| Probable asparagine synthetase AsnB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124601413|gb|EAY60423.1| asparagine synthetase asnB [Mycobacterium tuberculosis C]
gi|134150511|gb|EBA42556.1| asparagine synthetase asnB [Mycobacterium tuberculosis str.
Haarlem]
gi|148506170|gb|ABQ73979.1| putative asparagine synthetase [Mycobacterium tuberculosis H37Ra]
gi|148721935|gb|ABR06560.1| asparagine synthetase asnB [Mycobacterium tuberculosis F11]
gi|224773689|dbj|BAH26495.1| putative asparagine synthetase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253320237|gb|ACT24840.1| asparagine synthetase asnB [Mycobacterium tuberculosis KZN 1435]
gi|289438644|gb|EFD21137.1| asparagine synthetase asnB [Mycobacterium tuberculosis KZN 605]
gi|289539318|gb|EFD43896.1| asparagine synthetase asnB [Mycobacterium tuberculosis K85]
gi|289686002|gb|EFD53490.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289694896|gb|EFD62325.1| asparagine synthetase asnB [Mycobacterium tuberculosis EAS054]
gi|289713885|gb|EFD77897.1| asparagine synthetase AsnB [Mycobacterium tuberculosis T85]
gi|298495487|gb|EFI30781.1| asparagine synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|308215094|gb|EFO74493.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu001]
gi|308326846|gb|EFP15697.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu002]
gi|308330199|gb|EFP19050.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu003]
gi|308334036|gb|EFP22887.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu004]
gi|308337844|gb|EFP26695.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu005]
gi|308341604|gb|EFP30455.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu006]
gi|308345011|gb|EFP33862.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu007]
gi|308349321|gb|EFP38172.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu008]
gi|308354031|gb|EFP42882.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu009]
gi|308357972|gb|EFP46823.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu010]
gi|308361906|gb|EFP50757.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu011]
gi|308365570|gb|EFP54421.1| asparagine synthetase asnB [Mycobacterium tuberculosis SUMu012]
gi|323719101|gb|EGB28246.1| asparagine synthetase asnB [Mycobacterium tuberculosis CDC1551A]
gi|328458497|gb|AEB03920.1| asparagine synthetase asnB [Mycobacterium tuberculosis KZN 4207]
Length = 652
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 284 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 331
>gi|329896217|ref|ZP_08271395.1| Argininosuccinate synthase [gamma proteobacterium IMCC3088]
gi|328921888|gb|EGG29255.1| Argininosuccinate synthase [gamma proteobacterium IMCC3088]
Length = 406
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W D + V T + D GQ +VE + E+
Sbjct: 1 MSDINKVVLAYSGGLDTSVIVRWLQDTYNCEVVTFTADIGQGEEVEPARAKAEALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ D + P+
Sbjct: 61 YIEDLREEFVRDFVFPM 77
>gi|328881984|emb|CCA55223.1| NAD synthetase or Glutamine amidotransferase chain of NAD
synthetase [Streptomyces venezuelae ATCC 10712]
Length = 609
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSF--DYGQRNKV----ELECRLCVRKKI 60
S L+ SGG DS+ + A D + V +S Y + EL R + +
Sbjct: 350 RSVLVGLSGGIDSALVAAIACDALGAENVYGVSMPSKYSSDHSRGDAAELARRTGLHYRT 409
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
V + P + +G + LA S T +A+ Q+ ++
Sbjct: 410 VSIEPMFDAYMGSLGLTGLAEENLQSRLRGTTLMALSNQEGHI 452
>gi|296875545|ref|ZP_06899617.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus parasanguinis ATCC 15912]
gi|296433469|gb|EFH19244.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus parasanguinis ATCC 15912]
Length = 373
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS + V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKQQGYDVIGI 36
>gi|268610972|ref|ZP_06144699.1| NAD+ synthetase [Ruminococcus flavefaciens FD-1]
Length = 637
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVET 37
+A+L SGG DS+ L A+ FD +E
Sbjct: 344 KNAVLGLSGGLDSTLALIVAVHAFDLLEL 372
>gi|239934131|ref|ZP_04691084.1| asparagine synthase (glutamine-hydrolyzing) [Streptomyces
ghanaensis ATCC 14672]
Length = 612
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDY------GQRN-KVELECRLCVRKKIVELMP 65
L+ SGG DS S A + V T + Y +R+ E+ R VE+ P
Sbjct: 259 LIVSGGLDSGLVASLASEHGP-VHTFNLAYRGTWPSDERHFAREVAERAGAVHHQVEIDP 317
Query: 66 KWKDSLGEDHI 76
L E+ +
Sbjct: 318 ADFPKLLEETV 328
>gi|269119363|ref|YP_003307540.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Sebaldella termitidis ATCC 33386]
gi|268613241|gb|ACZ07609.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Sebaldella termitidis ATCC 33386]
Length = 353
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + + V ++
Sbjct: 1 MKTKVIVGMSGGVDSSAAALFLKKQGYEVIGIT 33
>gi|284992813|ref|YP_003411367.1| GMP synthase large subunit [Geodermatophilus obscurus DSM 43160]
gi|284066058|gb|ADB76996.1| GMP synthase, large subunit [Geodermatophilus obscurus DSM 43160]
Length = 520
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
AL SGG DS+ + DR+ + D+G
Sbjct: 216 RRALCALSGGVDSAVAAALVQRAIGDRLTCVYVDHG 251
>gi|169795184|ref|YP_001712977.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii AYE]
gi|213158152|ref|YP_002320203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii AB0057]
gi|215482732|ref|YP_002324930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii AB307-0294]
gi|239501147|ref|ZP_04660457.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii AB900]
gi|260556664|ref|ZP_05828882.1| tRNA methyl transferase [Acinetobacter baumannii ATCC 19606]
gi|301346855|ref|ZP_07227596.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii
AB056]
gi|301511134|ref|ZP_07236371.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii
AB058]
gi|301596413|ref|ZP_07241421.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii
AB059]
gi|205811029|sp|B0VBY5|MNMA_ACIBY RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205815008|sp|A3M7G3|MNMA_ACIBT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|226704765|sp|B7GZ21|MNMA_ACIB3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|226704766|sp|B7I4K8|MNMA_ACIB5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|169148111|emb|CAM85974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii AYE]
gi|213057312|gb|ACJ42214.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii AB0057]
gi|213987036|gb|ACJ57335.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii AB307-0294]
gi|260409923|gb|EEX03223.1| tRNA methyl transferase [Acinetobacter baumannii ATCC 19606]
Length = 377
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|154276466|ref|XP_001539078.1| hypothetical protein HCAG_06683 [Ajellomyces capsulatus NAm1]
gi|150414151|gb|EDN09516.1| hypothetical protein HCAG_06683 [Ajellomyces capsulatus NAm1]
Length = 410
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ L +SGG D+S L+W +++ V D GQ + + I L
Sbjct: 1 MPAKQKVCLAYSGGLDTSCILTWLIEQGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58
Query: 65 PKWKD 69
D
Sbjct: 59 LVVAD 63
>gi|41408039|ref|NP_960875.1| AsnB_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396394|gb|AAS04258.1| AsnB_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 643
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 275 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 322
>gi|85059063|ref|YP_454765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Sodalis glossinidius str. 'morsitans']
gi|123519587|sp|Q2NU15|MNMA_SODGM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|84779583|dbj|BAE74360.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Sodalis glossinidius str. 'morsitans']
Length = 369
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + RVE L
Sbjct: 1 MSDNGQK--KVIVGMSGGVDSSVSAWLLQQQGYRVEGL 36
>gi|71018831|ref|XP_759646.1| hypothetical protein UM03499.1 [Ustilago maydis 521]
gi|46099404|gb|EAK84637.1| hypothetical protein UM03499.1 [Ustilago maydis 521]
Length = 941
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 41/127 (32%), Gaps = 25/127 (19%)
Query: 13 LLFSGGQDSSTCLSWALDR-------------FDRVETLSFDYGQRNKVELECRLCVRKK 59
+LFSGG D +T A F+ V + +++ E R ++
Sbjct: 317 ILFSGGLDCTTLALLADRHVPKEQPIDLLNVGFENVRAIQ---AAKHEREKRLRSKLKAA 373
Query: 60 IVELMPKWKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ + G+ IL A + ++ + D+ VP R L
Sbjct: 374 SKRTRAQQEQLQGQHNCEILQDATDASRDSGAEAEDASEAYSDDVYA---VPDR----LT 426
Query: 118 FAATLAY 124
++ A
Sbjct: 427 GLSSYAE 433
>gi|305663003|ref|YP_003859291.1| GMP synthase (glutamine-hydrolyzing) [Ignisphaera aggregans DSM
17230]
gi|304377572|gb|ADM27411.1| GMP synthase (glutamine-hydrolyzing) [Ignisphaera aggregans DSM
17230]
Length = 520
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE 51
+ + L SGG DS+T DR+ + ++G + E E
Sbjct: 220 STVGEDEKVLCAVSGGIDSTTTALLVKKAIGDRLVAVFVNHGLLREGEAE 269
>gi|291534007|emb|CBL07120.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Megamonas hypermegale ART12/1]
Length = 135
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 36/128 (28%), Gaps = 8/128 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ SGG DSS + +++ V ++ + E R V K
Sbjct: 1 MKKKVAVAMSGGVDSSLTAALLIEQGYDVIGVTM------TLSDESREAGGSTAVSDAKK 54
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
D+L H + + K + PN V N + L
Sbjct: 55 VADALNIPHYVV--NYHKKFKDDVIKYFISEYAKGRTPNPCVRCNNTVKFGSLLKDCLEL 112
Query: 127 GITNIVIG 134
G + G
Sbjct: 113 GADCVATG 120
>gi|238750370|ref|ZP_04611871.1| NAD+ synthase [Yersinia rohdei ATCC 43380]
gi|238711301|gb|EEQ03518.1| NAD+ synthase [Yersinia rohdei ATCC 43380]
Length = 540
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ L+ A+D D+V+ L F Y + + K+ E++
Sbjct: 283 AVLGLSGGIDSALTLAIAVDALGKDKVQALMMPFRY------TADISIADAKEEAEILGI 336
Query: 67 WKDSLGEDHILPLAILGDIS 86
D L + + A +G +S
Sbjct: 337 EFDVLSIEPMFD-AFMGQLS 355
>gi|229087189|ref|ZP_04219338.1| Argininosuccinate synthase [Bacillus cereus Rock3-44]
gi|228696161|gb|EEL48997.1| Argininosuccinate synthase [Bacillus cereus Rock3-44]
Length = 401
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ +L +SGG D+S + W ++ V L D G
Sbjct: 2 EKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 38
>gi|212692213|ref|ZP_03300341.1| hypothetical protein BACDOR_01709 [Bacteroides dorei DSM 17855]
gi|212665090|gb|EEB25662.1| hypothetical protein BACDOR_01709 [Bacteroides dorei DSM 17855]
Length = 351
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKIVEL 63
+ LL SGG DSS D V ++F Y + N E LE + +++
Sbjct: 5 EPNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKGNDTEYLEDARTLCERLGIP 64
Query: 64 MPKWKDSLGEDHILPLAILGDI 85
+ + + +
Sbjct: 65 HLTYDVRGTFRKTIIDYFINEY 86
>gi|218899784|ref|YP_002448195.1| argininosuccinate synthase [Bacillus cereus G9842]
gi|226729217|sp|B7IK29|ASSY_BACC2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|218542345|gb|ACK94739.1| argininosuccinate synthase [Bacillus cereus G9842]
Length = 401
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ +L +SGG D+S + W ++ V L D G
Sbjct: 2 EKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 38
>gi|157363475|ref|YP_001470242.1| ExsB family protein [Thermotoga lettingae TMO]
gi|157314079|gb|ABV33178.1| ExsB family protein [Thermotoga lettingae TMO]
Length = 313
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYG 43
+ L+ FSGG+DS+ A V ++ D+G
Sbjct: 10 SEKLLVAFSGGEDSTLVAYLAKQALGEKKVILVTVDWG 47
>gi|113461819|ref|YP_719888.1| tRNA-specific 2-thiouridylase MnmA [Haemophilus somnus 129PT]
gi|123327501|sp|Q0I5Y6|MNMA_HAES1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|112823862|gb|ABI25951.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus somnus 129PT]
Length = 383
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS + +VE L
Sbjct: 21 NSKKKVICGMSGGVDSSVSAFILQQQGYQVEGL 53
>gi|152977001|ref|YP_001376518.1| argininosuccinate synthase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189046380|sp|A7GTR5|ASSY_BACCN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|152025753|gb|ABS23523.1| Argininosuccinate synthase [Bacillus cytotoxicus NVH 391-98]
Length = 401
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ +L +SGG D+S + W ++ V L D G
Sbjct: 2 EKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 38
>gi|321309601|ref|YP_004191930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma haemofelis str. Langford 1]
gi|319801445|emb|CBY92091.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma haemofelis str. Langford 1]
Length = 368
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 5/34 (14%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DS+ + + +
Sbjct: 1 MDSMKKVVIALSGGVDSAISAFLLKQKNHDLHAV 34
>gi|311896498|dbj|BAJ28906.1| putative GMP synthase [Kitasatospora setae KM-6054]
Length = 528
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
A+ SGG DS+ + DR+ + D+G
Sbjct: 227 KRAICGLSGGVDSAVAAALVQRAIGDRLTCVYVDHG 262
>gi|312115903|ref|YP_004013499.1| argininosuccinate synthase [Rhodomicrobium vannielii ATCC 17100]
gi|311221032|gb|ADP72400.1| argininosuccinate synthase [Rhodomicrobium vannielii ATCC 17100]
Length = 409
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M+D K +L +SGG D+S L W V T + D GQ ++E R
Sbjct: 1 MSDK-KSIKKVVLAYSGGLDTSIILKWLQVTYGCEVVTFTADLGQGEELEPARRKAELLG 59
Query: 60 IVEL-MPKWKDSLGEDHILPL 79
I ++ + ++ D++ P+
Sbjct: 60 IQQIYIEDLREEFVRDYVFPM 80
>gi|257055113|ref|YP_003132945.1| asparagine synthase (glutamine-hydrolysing) [Saccharomonospora
viridis DSM 43017]
gi|256584985|gb|ACU96118.1| asparagine synthase (glutamine-hydrolysing) [Saccharomonospora
viridis DSM 43017]
Length = 642
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 19/46 (41%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+ + A + + T + + ++ E++ +
Sbjct: 275 LSGGIDSTAIAALAKEHNPDLITFTTGFERKGYSEVDVAAESAAAL 320
>gi|184158965|ref|YP_001847304.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii
ACICU]
gi|205811014|sp|B2HVN5|MNMA_ACIBC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|183210559|gb|ACC57957.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase [Acinetobacter baumannii ACICU]
gi|322508947|gb|ADX04401.1| trmU [Acinetobacter baumannii 1656-2]
gi|323518933|gb|ADX93314.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii
TCDC-AB0715]
Length = 377
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|160893013|ref|ZP_02073801.1| hypothetical protein CLOL250_00551 [Clostridium sp. L2-50]
gi|156865096|gb|EDO58527.1| hypothetical protein CLOL250_00551 [Clostridium sp. L2-50]
Length = 427
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKI 60
D+ +L +SGG D++ + W + + V D GQ +++E L+ R
Sbjct: 17 DLEMAKDKVVLAYSGGLDTTAIIPWLKETYDYDVICACIDVGQESELEGLDERAKYSGAS 76
Query: 61 VELMPKWKDSLGEDHILP 78
+ D L +++I+P
Sbjct: 77 KLYILDVVDELCDEYIMP 94
>gi|118465242|ref|YP_881494.1| asparagine synthase (glutamine-hydrolyzing) [Mycobacterium avium
104]
gi|118166529|gb|ABK67426.1| asparagine synthase (glutamine-hydrolyzing) [Mycobacterium avium
104]
Length = 643
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 275 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 322
>gi|77459818|ref|YP_349325.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas fluorescens
Pf0-1]
gi|123604062|sp|Q3KA70|MNMA_PSEPF RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|77383821|gb|ABA75334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas fluorescens Pf0-1]
Length = 374
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS +++ VE L
Sbjct: 10 SKKRVIVGMSGGVDSSVSALLLIEQGYEVEGL 41
>gi|46123441|ref|XP_386274.1| hypothetical protein FG06098.1 [Gibberella zeae PH-1]
Length = 415
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ L +SGG D+ST L W + V D GQ +E V KK + L +
Sbjct: 6 VCLAYSGGLDTSTILKWLILEGYEVVCFLADVGQ-----VEDFDAVEKKALALGAE 56
>gi|315126737|ref|YP_004068740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas sp. SM9913]
gi|315015251|gb|ADT68589.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas sp. SM9913]
Length = 366
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 8 KVIVGMSGGVDSSVSAYLLKQQGYQVEGL 36
>gi|291442573|ref|ZP_06581963.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291345468|gb|EFE72424.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 633
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDY------GQRN-KVELECRLCVRKKIVELMP 65
L+ SGG DS S A + V T + Y +R+ E+ R VE+ P
Sbjct: 280 LIVSGGLDSGLVASLASEHGP-VHTFNLAYRGTWPSDERHFAREVAERAGAVHHQVEIDP 338
Query: 66 KWKDSLGEDHI 76
L E+ +
Sbjct: 339 ADFPKLLEETV 349
>gi|253574914|ref|ZP_04852254.1| tRNA methyl transferase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845960|gb|EES73968.1| tRNA methyl transferase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 378
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 12/38 (31%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M ++ SGG DSS + V +
Sbjct: 1 MMAKPNSETRVVVGMSGGVDSSVTALLLKQQGYDVIGI 38
>gi|157377405|ref|YP_001476005.1| argininosuccinate synthase [Shewanella sediminis HAW-EB3]
gi|189046407|sp|A8G1A4|ASSY_SHESH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|157319779|gb|ABV38877.1| Argininosuccinate synthase [Shewanella sediminis HAW-EB3]
Length = 407
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELEC--RL 54
M++ KK +L +SGG D+S + W + +D E ++F D GQ ELE
Sbjct: 1 MSNETKKTGVKKVVLAYSGGLDTSAIIPWLKETYDNCEIIAFCADVGQ-GDAELEGLHEK 59
Query: 55 CVRKKIVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ E + K+ L D+I P G I + +M
Sbjct: 60 AISSGASECYIVDLKEELVADYIYPTIATGAIYEGTYLLGTSMA 103
>gi|154249452|ref|YP_001410277.1| NAD+ synthetase [Fervidobacterium nodosum Rt17-B1]
gi|154153388|gb|ABS60620.1| NAD+ synthetase [Fervidobacterium nodosum Rt17-B1]
Length = 583
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 9 PSALLLFSGGQDSSTCLSWALD 30
A++ SGG DS+ A+D
Sbjct: 320 KKAVIGLSGGMDSTLVACIAVD 341
>gi|260904921|ref|ZP_05913243.1| tRNA-specific 2-thiouridylase MnmA [Brevibacterium linens BL2]
Length = 397
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS + A+D V +
Sbjct: 2 KILVAMSGGVDSSVAAARAVDAGHEVVGVH 31
>gi|78485443|ref|YP_391368.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thiomicrospira crunogena XCL-2]
gi|123555534|sp|Q31GM9|MNMA_THICR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|78363729|gb|ABB41694.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thiomicrospira crunogena XCL-2]
Length = 379
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + VE L
Sbjct: 12 KVIVGLSGGVDSSVTALLLKQQGYDVEGL 40
>gi|117927580|ref|YP_872131.1| GMP synthase [Acidothermus cellulolyticus 11B]
gi|117648043|gb|ABK52145.1| GMP synthase (glutamine-hydrolyzing) [Acidothermus cellulolyticus
11B]
Length = 522
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE-------CRLCVRKKIVE 62
A+ SGG DS+ + DR+ + D+G E E VR +V+
Sbjct: 225 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEAEQVEQDFVAATGVRLHVVD 284
Query: 63 LMPKWKDSL 71
++ +L
Sbjct: 285 AADRFLAAL 293
>gi|302524099|ref|ZP_07276441.1| GMP synthase domain-containing protein [Streptomyces sp. AA4]
gi|302432994|gb|EFL04810.1| GMP synthase domain-containing protein [Streptomyces sp. AA4]
Length = 518
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE 51
A+ SGG DS+ + DR+ + D+ G+R +VE +
Sbjct: 220 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERTQVERD 267
>gi|298528464|ref|ZP_07015868.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfonatronospira thiodismutans ASO3-1]
gi|298512116|gb|EFI36018.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfonatronospira thiodismutans ASO3-1]
Length = 344
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
+ SGG DS L + V L + R LE RL
Sbjct: 5 VAVSGGLDSLASLVMLREEGHDVLALHARFFPRLDEHLEKRLK 47
>gi|225407963|ref|ZP_03761152.1| hypothetical protein CLOSTASPAR_05184 [Clostridium asparagiforme
DSM 15981]
gi|225042503|gb|EEG52749.1| hypothetical protein CLOSTASPAR_05184 [Clostridium asparagiforme
DSM 15981]
Length = 299
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ FSGG+DS+ L A F + + D G
Sbjct: 30 VSFSGGKDSTVLLDMARRAFPEIRAVFVDTG 60
>gi|82703361|ref|YP_412927.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrosospira multiformis ATCC 25196]
gi|123544047|sp|Q2Y6T6|MNMA_NITMU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|82411426|gb|ABB75535.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nitrosospira multiformis ATCC 25196]
Length = 363
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ KA ++ SGG DSS + V L
Sbjct: 1 MSKA-RVVVGMSGGVDSSVAALLLKQQGYEVIGL 33
>gi|75760871|ref|ZP_00740884.1| LPS biosynthesis protein WbpG [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228905551|ref|ZP_04069500.1| LPS biosynthesis protein WbpG [Bacillus thuringiensis IBL 4222]
gi|74491633|gb|EAO54836.1| LPS biosynthesis protein WbpG [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228854087|gb|EEM98796.1| LPS biosynthesis protein WbpG [Bacillus thuringiensis IBL 4222]
Length = 323
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYG 43
K +L +SGG+DS+ L +++ V ++FD G
Sbjct: 45 KTNGKNYDIVLAYSGGKDSTYTLYLLKEKYKLNVLAVTFDNG 86
>gi|170718124|ref|YP_001785155.1| tRNA-specific 2-thiouridylase MnmA [Haemophilus somnus 2336]
gi|205816854|sp|B0UWF2|MNMA_HAES2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|168826253|gb|ACA31624.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus somnus 2336]
Length = 383
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS + +VE L
Sbjct: 21 NSKKKVICGMSGGVDSSVSAFILQQQGYQVEGL 53
>gi|330810455|ref|YP_004354917.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327378563|gb|AEA69913.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 374
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS +++ VE L
Sbjct: 10 SKKRVIVGMSGGVDSSVSALLLIEQGYEVEGL 41
>gi|260913335|ref|ZP_05919816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pasteurella dagmatis ATCC 43325]
gi|260632566|gb|EEX50736.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pasteurella dagmatis ATCC 43325]
Length = 383
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS + +VE L
Sbjct: 21 NSKKKVICGMSGGVDSSVSAFILQQQGYQVEGL 53
>gi|260201317|ref|ZP_05768808.1| asparagine synthetase asnB [Mycobacterium tuberculosis T46]
Length = 540
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 284 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 331
>gi|218262621|ref|ZP_03477009.1| hypothetical protein PRABACTJOHN_02688 [Parabacteroides johnsonii
DSM 18315]
gi|218223270|gb|EEC95920.1| hypothetical protein PRABACTJOHN_02688 [Parabacteroides johnsonii
DSM 18315]
Length = 435
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L D++ + ++G
Sbjct: 141 RKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHG 176
>gi|154493619|ref|ZP_02032939.1| hypothetical protein PARMER_02959 [Parabacteroides merdae ATCC
43184]
gi|154086829|gb|EDN85874.1| hypothetical protein PARMER_02959 [Parabacteroides merdae ATCC
43184]
Length = 435
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L D++ + ++G
Sbjct: 141 RKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHG 176
>gi|77360631|ref|YP_340206.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas haloplanktis TAC125]
gi|123588218|sp|Q3IH16|MNMA_PSEHT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|76875542|emb|CAI86763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas haloplanktis TAC125]
Length = 366
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 8 KVIVGMSGGVDSSVSAYLLKQQGYQVEGL 36
>gi|332860101|ref|XP_515202.3| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform
2 [Pan troglodytes]
Length = 418
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|312128625|ref|YP_003993499.1| PP-loop domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311778644|gb|ADQ08130.1| PP-loop domain protein [Caldicellulosiruptor hydrothermalis 108]
Length = 303
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + K L++ SGG+DS V + + G
Sbjct: 41 HKMFDKKDKILVVISGGKDSMALWHILASEGYNVTGMYINLG 82
>gi|309781297|ref|ZP_07676033.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia sp. 5_7_47FAA]
gi|308919710|gb|EFP65371.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia sp. 5_7_47FAA]
Length = 370
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 2 SKKRIVVGMSGGVDSSVTAWLLKQQGYDVVGL 33
>gi|312140823|ref|YP_004008159.1| gmp synthase [Rhodococcus equi 103S]
gi|325675540|ref|ZP_08155224.1| GMP synthase [Rhodococcus equi ATCC 33707]
gi|311890162|emb|CBH49480.1| GMP synthase [Rhodococcus equi 103S]
gi|325553511|gb|EGD23189.1| GMP synthase [Rhodococcus equi ATCC 33707]
Length = 525
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 37/198 (18%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
A+ SGG DS+ + DR+ + D+G E R V K V
Sbjct: 222 KAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLMRAGE---RQQVEKDFVAATGARL 278
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
++ L +++ S + I + F ++ LG
Sbjct: 279 ITVDASE----TFLRELAGVSDPETKRKIIGREFIR------------SFEGAVSEVLGE 322
Query: 129 TNIVIGVCET--DY----SGYPD-------CRHDTIRAIETAINLGMESHVTVHTPLMWL 175
+ D+ + YPD I++ L + + PL L
Sbjct: 323 SA----AHGETVDFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLQFKLVEPLRLL 378
Query: 176 KKYETWKLAQDIGGQDLV 193
K E + +++G + +
Sbjct: 379 FKDEVRAVGRELGLPEEI 396
>gi|281415846|gb|ADA69249.1| asparagine synthase [Nostoc sp. 'Peltigera membranacea cyanobiont']
Length = 647
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 15/82 (18%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVE---TLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
SGG DSST L A T++FD L+ ++ VE +
Sbjct: 262 CYLSGGLDSSTVLGMAARHTSHPIQAFTIAFD------RPLDDEQAFARETVEHVGANL- 314
Query: 70 SLGEDHILPLAILGDISHSSLT 91
HILP+ +SH +
Sbjct: 315 -----HILPVNQSDLVSHFADA 331
>gi|268611361|ref|ZP_06145088.1| hypothetical protein RflaF_17909 [Ruminococcus flavefaciens FD-1]
Length = 395
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
P +++ SGG+DS L + V + F
Sbjct: 18 NSPNPRVIMMLSGGKDSIAALCFLKKLGLDVTAIHF 53
>gi|260549713|ref|ZP_05823930.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter sp. RUH2624]
gi|260407230|gb|EEX00706.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter sp. RUH2624]
Length = 377
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|218295964|ref|ZP_03496744.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermus aquaticus Y51MC23]
gi|218243702|gb|EED10230.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermus aquaticus Y51MC23]
Length = 371
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRV 35
S L+ SGG DSS + V
Sbjct: 1 MRRSVLVAMSGGVDSSVSAYLLKEAGYEV 29
>gi|146311302|ref|YP_001176376.1| tRNA-specific 2-thiouridylase MnmA [Enterobacter sp. 638]
gi|205816867|sp|A4W9E5|MNMA_ENT38 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|145318178|gb|ABP60325.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterobacter sp. 638]
Length = 369
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DSS + +VE L
Sbjct: 1 MSASPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 35
>gi|330752308|emb|CBL87262.1| sulfate adenylyltransferase subunit 2 [uncultured Flavobacteria
bacterium]
Length = 300
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCV 56
++ ++ +LLFSGG+DS T + A F L D G LE R +
Sbjct: 21 EVAEQFEKPVLLFSGGKDSITMVHLAYKAFYPAKIPFTLLHIDTGHNFPEALEFRDAL 78
>gi|306832460|ref|ZP_07465612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|304425360|gb|EFM28480.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 393
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 21 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 56
>gi|261493287|ref|ZP_05989814.1| hypothetical protein COK_1696 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261311137|gb|EEY12313.1| hypothetical protein COK_1696 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 406
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 44 NSKKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 76
>gi|261496469|ref|ZP_05992849.1| hypothetical protein COI_2187 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261307672|gb|EEY08995.1| hypothetical protein COI_2187 [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 405
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 43 NSKKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 75
>gi|254774962|ref|ZP_05216478.1| asparagine synthase (glutamine-hydrolyzing) [Mycobacterium avium
subsp. avium ATCC 25291]
Length = 643
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 275 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 322
>gi|229579250|ref|YP_002837648.1| ATP binding protein [Sulfolobus islandicus Y.G.57.14]
gi|228009964|gb|ACP45726.1| ATP binding protein [Sulfolobus islandicus Y.G.57.14]
Length = 222
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+L+SGG+DS+ L WA+ + ++ L
Sbjct: 5 VLYSGGKDSTYALHWAVFKGFKIVCL 30
>gi|254486301|ref|ZP_05099506.1| non-ribosomal peptide synthetase, putative [Roseobacter sp. GAI101]
gi|214043170|gb|EEB83808.1| non-ribosomal peptide synthetase, putative [Roseobacter sp. GAI101]
Length = 2993
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 21/125 (16%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
L SGG+DS+ L + R L+ D G + + + +++ I +L
Sbjct: 921 LLSGGKDSTYALYRTVALGHRPYVLTLDNG---YLSQDAKTNIKRAIRDLC-------VP 970
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
+ + +G I SL+ + + + A A L I IV
Sbjct: 971 HEFVTTSEMGTIFRESLSAHS--NVCHGCFKTIY---------TLALQKAAELDIRAIVT 1019
Query: 134 GVCET 138
G+
Sbjct: 1020 GLSRG 1024
>gi|190892296|ref|YP_001978838.1| argininosuccinate synthase [Rhizobium etli CIAT 652]
gi|190697575|gb|ACE91660.1| argininosuccinate synthase protein [Rhizobium etli CIAT 652]
Length = 404
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +K +L +SGG D+S L W + + V T + D GQ ++E I +
Sbjct: 1 MARKIGKIVLAYSGGLDTSIILKWLQETYGCEVVTFTADLGQGEELEPARAKAAMLGIKD 60
Query: 63 L 63
+
Sbjct: 61 I 61
>gi|227830438|ref|YP_002832218.1| ATP binding protein [Sulfolobus islandicus L.S.2.15]
gi|229581989|ref|YP_002840388.1| ATP binding protein [Sulfolobus islandicus Y.N.15.51]
gi|284997932|ref|YP_003419699.1| putative ATP binding protein [Sulfolobus islandicus L.D.8.5]
gi|227456886|gb|ACP35573.1| ATP binding protein [Sulfolobus islandicus L.S.2.15]
gi|228012705|gb|ACP48466.1| ATP binding protein [Sulfolobus islandicus Y.N.15.51]
gi|284445827|gb|ADB87329.1| putative ATP binding protein [Sulfolobus islandicus L.D.8.5]
gi|323474797|gb|ADX85403.1| ATP binding protein [Sulfolobus islandicus REY15A]
gi|323477528|gb|ADX82766.1| ATP binding protein [Sulfolobus islandicus HVE10/4]
Length = 222
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+L+SGG+DS+ L WA+ + ++ L
Sbjct: 5 VLYSGGKDSTYALHWAVFKGFKIVCL 30
>gi|254363194|ref|ZP_04979243.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mannheimia haemolytica PHL213]
gi|153095088|gb|EDN75639.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mannheimia haemolytica PHL213]
Length = 387
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 25 NSKKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 57
>gi|222481023|ref|YP_002567260.1| argininosuccinate synthase [Halorubrum lacusprofundi ATCC 49239]
gi|222453925|gb|ACM58190.1| argininosuccinate synthase [Halorubrum lacusprofundi ATCC 49239]
Length = 412
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 17/122 (13%)
Query: 15 FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
FSGG D++ C+ + +D V ++ D GQ + E + + L
Sbjct: 8 FSGGLDTTVCVPLLKEEYGYDEVIGVNVDVGQPTE-EFDEAEETADAL---------GLD 57
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
+ D+ + ++ N + P R +I +A G I
Sbjct: 58 LHVVDAKEEFADLCYDAVKTNATYQ----GYPLGTALARPVIAEAI-LGVAEEQGCDAIA 112
Query: 133 IG 134
G
Sbjct: 113 HG 114
>gi|154245956|ref|YP_001416914.1| argininosuccinate synthase [Xanthobacter autotrophicus Py2]
gi|229889902|sp|A7IGW4|ASSY_XANP2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|154160041|gb|ABS67257.1| Argininosuccinate synthase [Xanthobacter autotrophicus Py2]
Length = 409
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MARDVKKVVLAYSGGLDTSVILKWLQTTYKCEVITFTADLGQ--GEELEPARKKAQLL 56
>gi|326692378|ref|ZP_08229383.1| tRNA(Ile)-lysidine synthase [Leuconostoc argentinum KCTC 3773]
Length = 435
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL--SFDYGQRNKVELECRLCV 56
P+ ++ SGG DS L + + +Y R + + +
Sbjct: 15 EPTIIVAVSGGVDSVVLLHALRQHLPTAQLVVAHVNYHLRAESDEDAAFVA 65
>gi|326390151|ref|ZP_08211712.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter ethanolicus JW 200]
gi|325993799|gb|EGD52230.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter ethanolicus JW 200]
Length = 364
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ + SGG DSS V L+
Sbjct: 1 MEINNRVAIGMSGGVDSSVAAYLLKKEGFDVIGLT 35
>gi|325967727|ref|YP_004243919.1| ATP binding protein [Vulcanisaeta moutnovskia 768-28]
gi|323706930|gb|ADY00417.1| putative ATP binding protein [Vulcanisaeta moutnovskia 768-28]
Length = 232
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETL 38
LFSGG+DS+ L WA+ + V L
Sbjct: 6 LFSGGKDSTYALHWAVLKGFSVTCL 30
>gi|319441115|ref|ZP_07990271.1| tRNA-specific 2-thiouridylase MnmA [Corynebacterium variabile DSM
44702]
Length = 364
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLS 39
SGG DSS + AL V +
Sbjct: 1 MSGGVDSSVAAARALAEGHEVIGVH 25
>gi|311894905|dbj|BAJ27313.1| putative argininosuccinate synthase [Kitasatospora setae KM-6054]
Length = 401
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 8 APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQ 44
+L +SGG D+S C+ W A + V ++ D GQ
Sbjct: 6 TDRVVLAYSGGLDTSVCIGWIAEETGAEVIAVAVDVGQ 43
>gi|307265214|ref|ZP_07546773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306919836|gb|EFN50051.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 387
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ + SGG DSS V L+
Sbjct: 24 MEINNRVAIGMSGGVDSSVAAYLLKKEGFDVIGLT 58
>gi|289443708|ref|ZP_06433452.1| asparagine synthase (glutamine-hydrolyzing) [Mycobacterium
tuberculosis T46]
gi|289416627|gb|EFD13867.1| asparagine synthase (glutamine-hydrolyzing) [Mycobacterium
tuberculosis T46]
Length = 574
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 318 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 365
>gi|224023875|ref|ZP_03642241.1| hypothetical protein BACCOPRO_00592 [Bacteroides coprophilus DSM
18228]
gi|224017097|gb|EEF75109.1| hypothetical protein BACCOPRO_00592 [Bacteroides coprophilus DSM
18228]
Length = 437
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 11/95 (11%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
L+ SGG DS L + R+E ++ R + E + +++ E
Sbjct: 20 ERVLVALSGGADSVALLCVLQELGYRLEAAHCNFHLRGE-ESDRDERFVRQLCERRQIPL 78
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
H++ + + ++ +++++ L
Sbjct: 79 ------HVIHFST----GAYAASRKISIEMAAREL 103
>gi|149928237|ref|ZP_01916481.1| argininosuccinate synthase [Limnobacter sp. MED105]
gi|149823043|gb|EDM82284.1| argininosuccinate synthase [Limnobacter sp. MED105]
Length = 409
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + + T + D GQ ++E R K ++
Sbjct: 1 MSDINKVVLAYSGGLDTSVILKWLQDTYGCEIVTFTADLGQGEELE-PARQKALKFGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
+ D + E+ +
Sbjct: 60 ENIYIDDVREEFVRD 74
>gi|332670623|ref|YP_004453631.1| sulfate adenylyltransferase, small subunit [Cellulomonas fimi
ATCC 484]
gi|332339661|gb|AEE46244.1| sulfate adenylyltransferase, small subunit [Cellulomonas fimi
ATCC 484]
Length = 318
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF 32
M ++ + +LLFSGG+DS L A F
Sbjct: 38 MREVAGEFERPVLLFSGGKDSIVMLHLARKAF 69
>gi|329910647|ref|ZP_08275342.1| Argininosuccinate synthase [Oxalobacteraceae bacterium IMCC9480]
gi|327546132|gb|EGF31187.1| Argininosuccinate synthase [Oxalobacteraceae bacterium IMCC9480]
Length = 410
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W D + + T + D GQ ++E R K ++
Sbjct: 1 MSDIKKVVLAYSGGLDTSVILKWLPDNYQCEIVTFTADLGQGEELE-PARQKALKFGIKP 59
Query: 64 MPKWKDSLGEDHILP 78
D + E+ +
Sbjct: 60 ENIHIDDVREEFVRD 74
>gi|325979485|ref|YP_004289201.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325179413|emb|CBZ49457.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 373
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|326772093|ref|ZP_08231378.1| PE-PGRS family protein [Actinomyces viscosus C505]
gi|326638226|gb|EGE39127.1| PE-PGRS family protein [Actinomyces viscosus C505]
Length = 556
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+ SGG DS W R + ++F YG E+ V + +
Sbjct: 207 LVPLSGGLDSRLLAVWLKRHGAR-DVVTFTYGVPGSSEVAISRGVAEAL 254
>gi|227827729|ref|YP_002829509.1| ATP binding protein [Sulfolobus islandicus M.14.25]
gi|229585000|ref|YP_002843502.1| ATP binding protein [Sulfolobus islandicus M.16.27]
gi|238619901|ref|YP_002914727.1| ATP binding protein [Sulfolobus islandicus M.16.4]
gi|227459525|gb|ACP38211.1| ATP binding protein [Sulfolobus islandicus M.14.25]
gi|228020050|gb|ACP55457.1| ATP binding protein [Sulfolobus islandicus M.16.27]
gi|238380971|gb|ACR42059.1| ATP binding protein [Sulfolobus islandicus M.16.4]
Length = 222
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+L+SGG+DS+ L WA+ + ++ L
Sbjct: 5 VLYSGGKDSTYALHWAVFKGFKIVCL 30
>gi|227486632|ref|ZP_03916948.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaerococcus lactolyticus ATCC 51172]
gi|227235344|gb|EEI85359.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaerococcus lactolyticus ATCC 51172]
Length = 367
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D KK ++ SGG DSS + V +
Sbjct: 1 MTD--KKDIKVIVGISGGVDSSVAALLLKEEGYDVTGI 36
>gi|241664140|ref|YP_002982500.1| tRNA-specific 2-thiouridylase MnmA [Ralstonia pickettii 12D]
gi|240866167|gb|ACS63828.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia pickettii 12D]
Length = 370
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 2 SKKRIVVGMSGGVDSSVTAWLLKQQGYDVVGL 33
>gi|126738485|ref|ZP_01754190.1| argininosuccinate synthase [Roseobacter sp. SK209-2-6]
gi|126720284|gb|EBA16990.1| argininosuccinate synthase [Roseobacter sp. SK209-2-6]
Length = 408
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE 49
+ +L +SGG D+S L W + V T + D GQ ++E
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELE 46
>gi|110803765|ref|YP_699484.1| argininosuccinate synthase [Clostridium perfringens SM101]
gi|110684266|gb|ABG87636.1| thiamin biosynthesis protein ThiI [Clostridium perfringens SM101]
Length = 326
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL + SGG DS D+ V + F
Sbjct: 3 RALAMISGGLDSILAAKLIKDQGIEVIGICF 33
>gi|6572985|gb|AAF17502.1|AF195615_10 PhzH [Pseudomonas chlororaphis]
Length = 610
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 47/135 (34%), Gaps = 21/135 (15%)
Query: 14 LFSGGQDSSTCLSWAL-----DRFDRVETLSFDY-GQRNK-VELECRLCVRKKIVELMPK 66
L SGG DS+T + A + + S D+ GQ + + R + L +
Sbjct: 263 LLSGGLDSTTLTAIAQRIVKAKTGGNINSFSVDFTGQAEQFKSDDLRPDQDQPFALLAAE 322
Query: 67 WKDSLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF------LVFA 119
+ S + ++ ++ ++ + + + ++ + N++F A
Sbjct: 323 FIGSRHQTVLIDNEELVSYLAREEVFRARELPFTFGDMDTSL----NLLFREIRKHSTVA 378
Query: 120 ATLAYRLGITNIVIG 134
+ G + G
Sbjct: 379 IS---GEGADEVFGG 390
>gi|324014127|gb|EGB83346.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 60-1]
Length = 437
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 10/81 (12%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
+N + + L+ FSGG DS+ L + + + +
Sbjct: 5 LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHV-----HHGLSANADA 59
Query: 56 VRKKIVELMPKWKDSLGEDHI 76
K + +W+ LG + +
Sbjct: 60 WVKHCENICQQWQGPLGVERV 80
>gi|306834574|ref|ZP_07467687.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus bovis ATCC 700338]
gi|304423376|gb|EFM26529.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus bovis ATCC 700338]
Length = 373
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|290968939|ref|ZP_06560474.1| argininosuccinate synthase [Megasphaera genomosp. type_1 str.
28L]
gi|290780895|gb|EFD93488.1| argininosuccinate synthase [Megasphaera genomosp. type_1 str.
28L]
Length = 409
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQ 44
+KK +L +SGG D+S + W + + V + D GQ
Sbjct: 1 MKKIKKIVLAYSGGLDTSVIIPWLKENYAGAEVIAVCADVGQ 42
>gi|269962837|ref|ZP_06177177.1| NH(3)-dependent NAD(+) synthetase [Vibrio harveyi 1DA3]
gi|269832391|gb|EEZ86510.1| NH(3)-dependent NAD(+) synthetase [Vibrio harveyi 1DA3]
Length = 276
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 63/204 (30%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC--LSW---------ALDRFDRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC L+ A D + + YG Q+++ E
Sbjct: 31 KLQEAGCKSLVLGISGGVDSTTCGRLAQLAVDQLNEEAGDSSYQFIAVRLPYGEQKDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L T+ + N+
Sbjct: 91 AQLALAFIQPTHSVSVNIKAGVDGLHAASHVALEGTGLL-PTEAAKVDFVKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDM 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + ++A +G + +
Sbjct: 188 APLFGLSKRQVREVAATLGAPEQL 211
>gi|255322169|ref|ZP_05363315.1| argininosuccinate synthase [Campylobacter showae RM3277]
gi|255300542|gb|EET79813.1| argininosuccinate synthase [Campylobacter showae RM3277]
Length = 407
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S L W D + V T + D GQ ++E R+K +EL K
Sbjct: 6 KKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELE-----PARQKALELGIKP 60
Query: 68 KDSLGED 74
++ ED
Sbjct: 61 ENIFIED 67
>gi|222151508|ref|YP_002560664.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Macrococcus caseolyticus JCSC5402]
gi|222120633|dbj|BAH17968.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Macrococcus caseolyticus JCSC5402]
Length = 371
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 3 NSKTKVVVGMSGGVDSSVTALLLKEQGYDVIGI 35
>gi|157371885|ref|YP_001479874.1| NAD synthetase [Serratia proteamaculans 568]
gi|157323649|gb|ABV42746.1| NAD+ synthetase [Serratia proteamaculans 568]
Length = 540
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRKKIVELM 64
A+L SGG DS+ L+ A+D D+V+ L F Y + + K+ E++
Sbjct: 281 KGAVLGLSGGIDSALTLAIAVDALGKDKVQALMMPFRY------TADISIADAKEEAEIL 334
Query: 65 PKWKDSLGEDHILPLAILGDIS 86
D + + + A +G ++
Sbjct: 335 GIEFDIVSIEPMFD-AFMGQLT 355
>gi|78042656|ref|YP_360115.1| hypothetical protein CHY_1281 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77994771|gb|ABB13670.1| conserved hypothetical protein TIGR00268 [Carboxydothermus
hydrogenoformans Z-2901]
Length = 275
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSF---DYGQRNKVELECRLCV 56
+ +I+++ S ++ FSGG DS+ L A D D V ++ Y +ELE +
Sbjct: 12 LQNILQEMGSVVIAFSGGVDSTFLLKVAKDVLGDNVLAVTATSSTYP---AIELEEAKKL 68
Query: 57 RK 58
+
Sbjct: 69 AQ 70
>gi|305664584|ref|YP_003860871.1| sulfate adenylyltransferase subunit 2 [Maribacter sp. HTCC2170]
gi|88708601|gb|EAR00837.1| sulfate adenylyltransferase subunit 2 [Maribacter sp. HTCC2170]
Length = 299
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD 33
M ++ + +LLFSGG+DS T + A F
Sbjct: 18 MREVAAQFEKPVLLFSGGKDSITLVRLAQKAFY 50
>gi|332297915|ref|YP_004439837.1| Argininosuccinate synthase [Treponema brennaborense DSM 12168]
gi|332181018|gb|AEE16706.1| Argininosuccinate synthase [Treponema brennaborense DSM 12168]
Length = 421
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
+L +SGG D++ + W + + V + D GQ
Sbjct: 2 SKDKVILAYSGGLDTTVIIPWLKENYDYDVIAVCIDVGQ 40
>gi|294101584|ref|YP_003553442.1| GMP synthase, large subunit [Aminobacterium colombiense DSM 12261]
gi|293616564|gb|ADE56718.1| GMP synthase, large subunit [Aminobacterium colombiense DSM 12261]
Length = 510
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 1 MNDIIKKAPSALLL--FSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+ D+ +K +A ++ SGG DS+ + DR+E + + G E E L
Sbjct: 205 VKDVQQKTENARVICGLSGGVDSTVAAVLTSKAIGDRLECIFVNNGLLRHREAERVLEKY 264
Query: 58 KKI 60
K++
Sbjct: 265 KQL 267
>gi|254822979|ref|ZP_05227980.1| GMP synthase [Mycobacterium intracellulare ATCC 13950]
Length = 514
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
A+ SGG DS+ + DR+ + D+G E E R +
Sbjct: 212 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG--LLREGERAQVQRDFVAATGANLVT 269
Query: 70 SLGEDHILP 78
D L
Sbjct: 270 VDAADTFLD 278
>gi|257052580|ref|YP_003130413.1| argininosuccinate synthase [Halorhabdus utahensis DSM 12940]
gi|256691343|gb|ACV11680.1| argininosuccinate synthase [Halorhabdus utahensis DSM 12940]
Length = 404
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 15 FSGGQDSSTCLSWALDR--FDRVETLSFDYGQ-----RNKVELECRLCVRKKIVELMPKW 67
FSGG D++ C+ + +D V ++ D GQ E L + +V+ +
Sbjct: 14 FSGGLDTTVCVPLLKEEYGYDDVIGVTVDVGQPDYEFDEAEETAEALGLDHYVVDAREAF 73
Query: 68 KD 69
D
Sbjct: 74 AD 75
>gi|218676056|ref|YP_002394875.1| NAD synthetase [Vibrio splendidus LGP32]
gi|254766725|sp|B7VQP3|NADE_VIBSL RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|218324324|emb|CAV25662.1| NAD synthase [Vibrio splendidus LGP32]
Length = 276
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 63/205 (30%), Gaps = 36/205 (17%)
Query: 2 NDIIKKAPSALLL-FSGGQDSSTC--LSW---------ALDRFDRVETLSFDYG-QRNKV 48
+ + +L+L SGG DS+TC L+ A + + YG Q+++
Sbjct: 30 TKLQQSGCKSLILGISGGVDSTTCGRLAQMAVDSLNESAGSDEYQFIAVRLPYGEQKDED 89
Query: 49 ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
E + L + + K + H L T + + N+
Sbjct: 90 EAQLALSFIQPSQSVSVNIKAGVDGLHAASHVALEGTGLL-PTDSAKIDFVKGNVK---- 144
Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
R A +A + V TD+S + I
Sbjct: 145 -AR-------ARMIAQYEIAGYVGGLVIGTDHSA------ENITGF----YTKHGDGACD 186
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + +LA +G + +
Sbjct: 187 LAPLFGLNKRQVRELAATLGAPEQL 211
>gi|198282730|ref|YP_002219051.1| NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667784|ref|YP_002424924.1| glutamine-dependent NAD+ synthetase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198247251|gb|ACH82844.1| NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519997|gb|ACK80583.1| glutamine-dependent NAD+ synthetase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 549
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
P A+L SGG DS+ L+ A+D +RV L R E+ V +
Sbjct: 281 PGAVLGLSGGVDSALTLAVAVDALGAERVHALIM--PSRYTAEMSIADAVAEA 331
>gi|90426215|ref|YP_534585.1| tRNA(Ile)-lysidine synthetase-like [Rhodopseudomonas palustris
BisB18]
gi|90108229|gb|ABD90266.1| tRNA(Ile)-lysidine synthetase-like [Rhodopseudomonas palustris
BisB18]
Length = 346
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Query: 10 SALLL-FSGGQDSSTCLSW------ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
A++L SGG DS + AL R + ++ D+G R + E R R
Sbjct: 25 KAVVLAVSGGPDSLALMWLAARWRKALRRGPAISVITVDHGLRPEAAREARDVKRHAAEL 84
Query: 63 LMPK 66
+P
Sbjct: 85 DLPH 88
>gi|333029309|ref|ZP_08457370.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides coprosuis DSM
18011]
gi|332739906|gb|EGJ70388.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides coprosuis DSM
18011]
Length = 371
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 42/130 (32%), Gaps = 18/130 (13%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ L+ SGG DSS +++ ++ V
Sbjct: 10 NRNKRVLVGLSGGIDSSATCIMLMEQGYTPIGVTMQ--------------VWGDAPSEAK 55
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF-LVFAATLAY 124
+ D LG +H + A D +S+ KN + + PN V N +F A
Sbjct: 56 ELADRLGMEHYI--ADERDDFKASVVKNFIDEYRSGRTPNPCVMC-NPLFKFRILKDYAD 112
Query: 125 RLGITNIVIG 134
+L I G
Sbjct: 113 KLNCQWIATG 122
>gi|322390500|ref|ZP_08064018.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus parasanguinis ATCC 903]
gi|321142774|gb|EFX38234.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus parasanguinis ATCC 903]
Length = 373
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS + V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKQQGYDVIGI 36
>gi|227515369|ref|ZP_03945418.1| argininosuccinate synthase [Lactobacillus fermentum ATCC 14931]
gi|227086283|gb|EEI21595.1| argininosuccinate synthase [Lactobacillus fermentum ATCC 14931]
Length = 438
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
D + +L +SGG D+S ++W ++ V D G
Sbjct: 7 DELMAKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVG 47
>gi|225020538|ref|ZP_03709730.1| hypothetical protein CORMATOL_00545 [Corynebacterium matruchotii
ATCC 33806]
gi|224946668|gb|EEG27877.1| hypothetical protein CORMATOL_00545 [Corynebacterium matruchotii
ATCC 33806]
Length = 517
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
+ + + A+ SGG DS+ + DR+ + D+G
Sbjct: 204 VREQVGDTGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG 247
>gi|239616529|ref|YP_002939851.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Kosmotoga olearia TBF 19.5.1]
gi|239505360|gb|ACR78847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Kosmotoga olearia TBF 19.5.1]
Length = 359
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 6/27 (22%), Positives = 9/27 (33%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DS+ + V
Sbjct: 7 VALSGGVDSAVAAAILKAEGHDVVGYH 33
>gi|145250519|ref|XP_001396773.1| argininosuccinate synthase [Aspergillus niger CBS 513.88]
gi|134082293|emb|CAK42337.1| unnamed protein product [Aspergillus niger]
Length = 417
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 5/57 (8%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + L +SGG D+S L W ++ V + GQ E + K +
Sbjct: 1 MASEKPRVCLAYSGGLDTSCILRWLIEEGYDVVCFLGNVGQ----EEDWAAVEAKAL 53
>gi|124027938|ref|YP_001013258.1| hypothetical protein Hbut_1070 [Hyperthermus butylicus DSM 5456]
gi|123978632|gb|ABM80913.1| universally conserved protein [Hyperthermus butylicus DSM 5456]
Length = 231
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
P A +FSGG+DS+ L WA+ V L
Sbjct: 2 PLACSMFSGGKDSTYALHWAVLHGYDVCCL 31
>gi|306819006|ref|ZP_07452723.1| argininosuccinate synthase [Mobiluncus mulieris ATCC 35239]
gi|307700340|ref|ZP_07637380.1| argininosuccinate synthase [Mobiluncus mulieris FB024-16]
gi|304648199|gb|EFM45507.1| argininosuccinate synthase [Mobiluncus mulieris ATCC 35239]
gi|307614551|gb|EFN93780.1| argininosuccinate synthase [Mobiluncus mulieris FB024-16]
Length = 411
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+L +SGG D+S + W ++ D V +S D GQ
Sbjct: 3 KKRIVLAYSGGLDTSVAIGWMKEKLDVEVIAVSVDCGQ 40
>gi|322435517|ref|YP_004217729.1| argininosuccinate synthase [Acidobacterium sp. MP5ACTX9]
gi|321163244|gb|ADW68949.1| argininosuccinate synthase [Acidobacterium sp. MP5ACTX9]
Length = 446
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 21/55 (38%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S L W + + + GQ ++ + E + + D
Sbjct: 18 FSGGLDTSAALHWMKQKGALPYAYTANLGQPDEADYEEIPRKALEYGAEKARLID 72
>gi|288906423|ref|YP_003431645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus gallolyticus UCN34]
gi|288733149|emb|CBI14730.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus gallolyticus UCN34]
Length = 373
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|254474771|ref|ZP_05088157.1| argininosuccinate synthase [Ruegeria sp. R11]
gi|214029014|gb|EEB69849.1| argininosuccinate synthase [Ruegeria sp. R11]
Length = 408
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ EL+ + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELDPARKKAEML 55
>gi|160944760|ref|ZP_02091987.1| hypothetical protein FAEPRAM212_02275 [Faecalibacterium
prausnitzii M21/2]
gi|158443944|gb|EDP20948.1| hypothetical protein FAEPRAM212_02275 [Faecalibacterium
prausnitzii M21/2]
Length = 367
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 12/34 (35%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
P AL+ SGG DSS ++
Sbjct: 9 RPRALIAMSGGVDSSVAACLMQQAGYDCTGITMR 42
>gi|71064847|ref|YP_263574.1| putative NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase
[Psychrobacter arcticus 273-4]
gi|71037832|gb|AAZ18140.1| putative NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase
[Psychrobacter arcticus 273-4]
Length = 567
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D D+V + Y +++ LE +++
Sbjct: 310 IVGLSGGIDSALTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRL 360
>gi|18310765|ref|NP_562699.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens str. 13]
gi|18145446|dbj|BAB81489.1| probable tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Clostridium perfringens str. 13]
Length = 350
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLS 39
SGG DSS ++ V ++
Sbjct: 1 MSGGVDSSVAAYLLKEQGYDVIGVT 25
>gi|15922366|ref|NP_378035.1| hypothetical protein ST2048 [Sulfolobus tokodaii str. 7]
gi|15623155|dbj|BAB67144.1| 222aa long conserved hypothetical protein [Sulfolobus tokodaii
str. 7]
Length = 222
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETL 38
LFSGG+DS+ L WA+ + + L
Sbjct: 6 LFSGGKDSTYSLHWAVLKGFEILCL 30
>gi|93005127|ref|YP_579564.1| NAD+ synthetase [Psychrobacter cryohalolentis K5]
gi|92392805|gb|ABE74080.1| NAD+ synthetase [Psychrobacter cryohalolentis K5]
Length = 567
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D D+V + Y +++ LE +++
Sbjct: 310 IVGLSGGIDSALTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRL 360
>gi|186682261|ref|YP_001865457.1| asparagine synthase [Nostoc punctiforme PCC 73102]
gi|186464713|gb|ACC80514.1| asparagine synthase [Nostoc punctiforme PCC 73102]
Length = 584
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 33/104 (31%), Gaps = 16/104 (15%)
Query: 13 LLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ SGG DSS + A V T S +G ELE V
Sbjct: 255 VFLSGGLDSSCITALAAKFHKAPVHTFSIHFGSECPNELEFSSLVASHCQ---------- 304
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
+ HIL + S T + P T VP N++
Sbjct: 305 TQHHILEITFKDMWSRLPETMAYLDDPIGD--PLT-VP--NLLL 343
>gi|319946006|ref|ZP_08020255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus australis ATCC 700641]
gi|319747814|gb|EFW00059.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus australis ATCC 700641]
Length = 373
Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS + V +
Sbjct: 1 MSDNSKT--RVVVGMSGGVDSSVTALLLKQQGYDVIGI 36
>gi|332652624|ref|ZP_08418369.1| GMP synthase, C- domain protein [Ruminococcaceae bacterium D16]
gi|332517770|gb|EGJ47373.1| GMP synthase, C- domain protein [Ruminococcaceae bacterium D16]
Length = 429
Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + V + ++ +
Sbjct: 135 KKVLLALSGGVDSSVVAALLIKAIGKQLTCVHVNHGLLRKGEPEQVVKVFRDEMDANLVY 194
Query: 68 KDSLG 72
D++
Sbjct: 195 VDAVD 199
>gi|268608557|ref|ZP_06142284.1| tRNA-specific 2-thiouridylase MnmA [Ruminococcus flavefaciens
FD-1]
Length = 358
Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMP 65
++ SGG DSS ++ V ++ F ++ + E + C VE
Sbjct: 2 KKVMVGMSGGVDSSVAAMLLREQGYDVMGVTLKLFSDEDIDQAQKEGKTCCALSDVEDAR 61
Query: 66 KWKDSLGEDHIL 77
LG +H++
Sbjct: 62 SVARRLGFEHLV 73
>gi|163800263|ref|ZP_02194164.1| NAD synthetase [Vibrio sp. AND4]
gi|159175706|gb|EDP60500.1| NAD synthetase [Vibrio sp. AND4]
Length = 276
Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 64/198 (32%), Gaps = 36/198 (18%)
Query: 9 PSALLL-FSGGQDSSTC---LSWALDR--------FDRVETLSFDYG-QRNKVELECRLC 55
AL+L SGG DS+TC A+D+ + + YG Q+++ E + L
Sbjct: 37 CKALVLGISGGVDSTTCGRLAQLAVDQLNEETGDTKYQFIAVRLPYGEQKDEDEAQLALD 96
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
+ + K + H S + + + + FV G N+
Sbjct: 97 FIQPTHSVSVNIKAGVDGLH----------GASHVALQGSGLLPTDAAKVDFVKG-NVK- 144
Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
A +A + V TD+S + PL L
Sbjct: 145 -ARARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDMAPLFGL 193
Query: 176 KKYETWKLAQDIGGQDLV 193
K + ++A +G + +
Sbjct: 194 SKRQVREVAATLGAPEQL 211
>gi|116327057|ref|YP_796777.1| sulfate adenylyltransferase subunit 2 [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116332285|ref|YP_802003.1| sulfate adenylyltransferase subunit 2 [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116119801|gb|ABJ77844.1| Phosphoadenylyl-sulfate reductase (thioredoxin) [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116125974|gb|ABJ77245.1| Phosphoadenylyl-sulfate reductase [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 305
Score = 36.7 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 13 LLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
LLFSGG+DS T + AL F + D G + L+ R + KI E +
Sbjct: 36 LLFSGGKDSITLVHLALKAFRPGKFPFPLVHIDTGHNFQEALDFRDKLASKIGEKL 91
>gi|297544032|ref|YP_003676334.1| asparagine synthase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841807|gb|ADH60323.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 613
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 14 LFSGGQDSSTCLSWA----LDRFDRVETLSFDY 42
L SGG DS+ ++A + ++ T S DY
Sbjct: 263 LLSGGLDSTAVSAFANEELKQKGQKLITYSVDY 295
>gi|289577730|ref|YP_003476357.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
italicus Ab9]
gi|289527443|gb|ADD01795.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
italicus Ab9]
Length = 613
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 14 LFSGGQDSSTCLSWA----LDRFDRVETLSFDY 42
L SGG DS+ ++A + ++ T S DY
Sbjct: 263 LLSGGLDSTAVSAFANEELKQKGQKLITYSVDY 295
>gi|154484582|ref|ZP_02027030.1| hypothetical protein EUBVEN_02298 [Eubacterium ventriosum ATCC
27560]
gi|149734430|gb|EDM50347.1| hypothetical protein EUBVEN_02298 [Eubacterium ventriosum ATCC
27560]
Length = 358
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
AL+ SGG DSS + ++ ++
Sbjct: 2 KKALIAMSGGVDSSVAAVFMKEKGYDPIGVT 32
>gi|47678421|emb|CAG30331.1| dJ1163J1.4 [Homo sapiens]
gi|109451226|emb|CAK54474.1| TRMU [synthetic construct]
gi|109451804|emb|CAK54773.1| TRMU [synthetic construct]
gi|119593832|gb|EAW73426.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase,
isoform CRA_e [Homo sapiens]
gi|162844904|emb|CAP58845.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Homo
sapiens]
gi|208965646|dbj|BAG72837.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
[synthetic construct]
Length = 376
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|167038169|ref|YP_001665747.1| asparagine synthase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320116578|ref|YP_004186737.1| asparagine synthase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166857003|gb|ABY95411.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929669|gb|ADV80354.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 613
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 14 LFSGGQDSSTCLSWA----LDRFDRVETLSFDY 42
L SGG DS+ ++A + ++ T S DY
Sbjct: 263 LLSGGLDSTAVSAFANEELKQKGQKLITYSVDY 295
>gi|329733069|gb|EGG69406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Staphylococcus aureus subsp. aureus 21193]
Length = 372
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K ++ SGG DSS ++ V +
Sbjct: 1 MSNKDIRVVIGMSGGVDSSVTAHVLKEQGYDVIGI 35
>gi|327467727|gb|EGF13221.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis SK330]
Length = 425
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVE---TL-SFDYGQRNKVELECRLCVRKKIV 61
+ L+ SGG DS T L +D + + ++ QR + E E + V KI
Sbjct: 17 QDHQKVLVAVSGGLDSMTLLQLLVDYQKELAIELAIAHVNHKQRPESEQEEKALV--KIA 74
Query: 62 ELMP 65
E +
Sbjct: 75 EQLG 78
>gi|319891938|ref|YP_004148813.1| Argininosuccinate synthase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161634|gb|ADV05177.1| Argininosuccinate synthase [Staphylococcus pseudintermedius
HKU10-03]
gi|323464971|gb|ADX77124.1| argininosuccinate synthase [Staphylococcus pseudintermedius ED99]
Length = 400
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+L +SGG D+S + W +++ V D G
Sbjct: 1 MKDKVVLAYSGGLDTSVAVKWLIEQGYDVIACCLDVG 37
>gi|270264765|ref|ZP_06193030.1| hypothetical protein SOD_i01820 [Serratia odorifera 4Rx13]
gi|270041448|gb|EFA14547.1| hypothetical protein SOD_i01820 [Serratia odorifera 4Rx13]
Length = 540
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRKKIVELM 64
A+L SGG DS+ L+ A+D D+V+ L F Y + + K+ E++
Sbjct: 281 KGAVLGLSGGIDSALTLAIAVDALGKDKVQALMMPFRY------TADISIADAKEEAEIL 334
Query: 65 PKWKDSLGEDHILPLAILGDIS 86
D + + + A +G ++
Sbjct: 335 GVEFDIVSIEPMFD-AFMGQLT 355
>gi|220905538|ref|YP_002480850.1| PP-loop domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869837|gb|ACL50172.1| PP-loop domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 303
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 7/77 (9%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-------QRNKVELECRL 54
+ + L+ SGG+DS + + V L D G R VE C
Sbjct: 41 QKLFTRDERVLVALSGGKDSLALMLELSRQGYNVTGLHIDLGIPVSSAAARGVVERFCAK 100
Query: 55 CVRKKIVELMPKWKDSL 71
K ++ M ++
Sbjct: 101 HGLKLMIREMAAEGLAI 117
>gi|195443094|ref|XP_002069274.1| GK21111 [Drosophila willistoni]
gi|194165359|gb|EDW80260.1| GK21111 [Drosophila willistoni]
Length = 684
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
+ LLL SGG DSS C + ++ + D G + E E + I
Sbjct: 228 SNKVLLLVSGGVDSSVCAALLRRALHPGQIIAVHVDNGFMRQNESEKVERSLRDI 282
>gi|27262508|gb|AAN87535.1| cell cycle protein MesJ [Heliobacillus mobilis]
Length = 308
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 39/140 (27%), Gaps = 27/140 (19%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKK 59
I K ++ SGG DS L + +++G R K E V +
Sbjct: 17 INKPRERIVIALSGGADSVCLLLLFKKVSPQFGIELAAAHYNHGMRGKESDEDAAFVAE- 75
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ L L A L TK A + + FL +
Sbjct: 76 -------LTNRLQVPLFLETAPLKWWQQEPGTKMEAARRLRYD------------FLSRS 116
Query: 120 ATLAYRLGITNIVIGVCETD 139
A + G I + D
Sbjct: 117 ---AEQAGARWIALAHHADD 133
>gi|61216758|sp|Q9ZGE2|TILS_HELMO RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|3820563|gb|AAC84036.1| cell cycle protein MesJ [Heliobacillus mobilis]
Length = 470
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 39/140 (27%), Gaps = 27/140 (19%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKK 59
I K ++ SGG DS L + +++G R K E V +
Sbjct: 17 INKPRERIVIALSGGADSVCLLLLFKKVSPQFGIELAAAHYNHGMRGKESDEDAAFVAE- 75
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ L L A L TK A + + FL +
Sbjct: 76 -------LTNRLQVPLFLETAPLKWWQQEPGTKMEAARRLRYD------------FLSRS 116
Query: 120 ATLAYRLGITNIVIGVCETD 139
A + G I + D
Sbjct: 117 ---AEQAGARWIALAHHADD 133
>gi|319940179|ref|ZP_08014532.1| tRNA-specific 2-thiouridylase mnmA [Streptococcus anginosus
1_2_62CV]
gi|319810650|gb|EFW06980.1| tRNA-specific 2-thiouridylase mnmA [Streptococcus anginosus
1_2_62CV]
Length = 373
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDHSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|319442945|ref|ZP_07992101.1| GMP synthase [Corynebacterium variabile DSM 44702]
Length = 512
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE 51
+ + + A+ SGG DS+ + DR+ + D+G K E E
Sbjct: 201 VREQVGPEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRKGERE 252
>gi|311085999|gb|ADP66081.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086574|gb|ADP66655.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087155|gb|ADP67235.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087689|gb|ADP67768.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 392
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS C + +VE L
Sbjct: 35 VAMSGGVDSSVCAWILKKQNYQVEGL 60
>gi|257471315|ref|ZP_05635314.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
Length = 392
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS C + +VE L
Sbjct: 35 VAMSGGVDSSVCAWILKKQNYQVEGL 60
>gi|255320585|ref|ZP_05361763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter radioresistens SK82]
gi|262378583|ref|ZP_06071740.1| tRNA methyl transferase [Acinetobacter radioresistens SH164]
gi|255302347|gb|EET81586.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter radioresistens SK82]
gi|262299868|gb|EEY87780.1| tRNA methyl transferase [Acinetobacter radioresistens SH164]
Length = 377
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|219681627|ref|YP_002468013.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
gi|219624470|gb|ACL30625.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
Length = 368
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS C + +VE L
Sbjct: 11 VAMSGGVDSSVCAWILKKQNYQVEGL 36
>gi|219682184|ref|YP_002468568.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|219621917|gb|ACL30073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
Length = 368
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS C + +VE L
Sbjct: 11 VAMSGGVDSSVCAWILKKQNYQVEGL 36
>gi|205829196|sp|B1WC37|MTU1_RAT RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1
gi|171846652|gb|AAI61991.1| Trmu protein [Rattus norvegicus]
Length = 441
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + SGG DS+ R +V +
Sbjct: 1 MSALRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|187930035|ref|YP_001900522.1| tRNA-specific 2-thiouridylase MnmA [Ralstonia pickettii 12J]
gi|229486417|sp|B2UC85|MNMA_RALPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|187726925|gb|ACD28090.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ralstonia pickettii 12J]
Length = 370
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V L
Sbjct: 2 SKKRIVVGMSGGVDSSVTAWLLKQQGYDVVGL 33
>gi|114686943|ref|XP_001137340.1| PREDICTED: tRNA 5-methylaminomethyl-2-thiouridylate
methyltransferase 1 isoform 1 [Pan troglodytes]
Length = 390
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|25298369|pir||C84960 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC
2.1.1.61) [imported] - Buchnera sp. (strain APS)
gi|10038936|dbj|BAB12971.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
Length = 392
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS C + +VE L
Sbjct: 35 VAMSGGVDSSVCAWILKKQNYQVEGL 60
>gi|28952048|ref|NP_240085.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
gi|11135216|sp|P57349|MNMA_BUCAI RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 368
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS C + +VE L
Sbjct: 11 VAMSGGVDSSVCAWILKKQNYQVEGL 36
>gi|302340314|ref|YP_003805520.1| PP-loop domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301637499|gb|ADK82926.1| PP-loop domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 293
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 59/182 (32%), Gaps = 40/182 (21%)
Query: 9 PSALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ FSGG DS+ C + R +S + + VE
Sbjct: 36 ERVAIAFSGGVDSTFLCRAAMEASCLRPIAISL-----------VSPFIPHREVEEAKDL 84
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+G +H+ A L + ++ K+ + F L AA G
Sbjct: 85 AKKIGIEHVCIQAQLLSETVAANPKDRCYHCKR----IVF-----TTLLQTAAGY----G 131
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLKKYETWKLAQ 185
I I+ G D Y R + LG +H+PL + L K E +L++
Sbjct: 132 IGTILDGSNADDRYDY---RPG----MRALAELG------IHSPLLEIGLGKNEIRELSK 178
Query: 186 DI 187
+
Sbjct: 179 IL 180
>gi|302381575|ref|YP_003817398.1| argininosuccinate synthase [Brevundimonas subvibrioides ATCC
15264]
gi|302192203|gb|ADK99774.1| argininosuccinate synthase [Brevundimonas subvibrioides ATCC
15264]
Length = 411
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELE-CRLCVR 57
M +K ++L +SGG D+S L W + V T + D GQ EL R
Sbjct: 1 MAKASEKPVKKVVLAYSGGLDTSIILKWLQTEYNAEVVTFTADLGQ--GEELAPAREKAL 58
Query: 58 KKIVELMPKWKDSLGEDHILP 78
K ++ + D L E+ +
Sbjct: 59 KMGIKPENIFIDDLREEFVRD 79
>gi|227875730|ref|ZP_03993858.1| argininosuccinate synthase [Mobiluncus mulieris ATCC 35243]
gi|269976721|ref|ZP_06183697.1| argininosuccinate synthase [Mobiluncus mulieris 28-1]
gi|227843672|gb|EEJ53853.1| argininosuccinate synthase [Mobiluncus mulieris ATCC 35243]
gi|269935086|gb|EEZ91644.1| argininosuccinate synthase [Mobiluncus mulieris 28-1]
Length = 411
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+L +SGG D+S + W ++ D V +S D GQ
Sbjct: 3 KKRIVLAYSGGLDTSVAIGWMKEKLDVEVIAVSVDCGQ 40
>gi|222528237|ref|YP_002572119.1| PP-loop domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222455084|gb|ACM59346.1| PP-loop domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 301
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + K L++ SGG+DS V + + G
Sbjct: 41 HKMFDKKDKILVVISGGKDSMALWHILASEGYNVTGMYINLG 82
>gi|205822192|sp|A9M0Y5|MNMA_NEIM0 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 367
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + ++ SGG DSS + + +V +
Sbjct: 1 MN-TTANTTNIIVGLSGGVDSSVTAALLKQQGYQVRGV 37
>gi|163942146|ref|YP_001647030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus weihenstephanensis KBAB4]
gi|205812536|sp|A9VIM2|MNMA_BACWK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|163864343|gb|ABY45402.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus weihenstephanensis KBAB4]
Length = 371
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN + + ++ SGG DSS ++ V +
Sbjct: 1 MNK-LPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|331699094|ref|YP_004335333.1| GMP synthase [Pseudonocardia dioxanivorans CB1190]
gi|326953783|gb|AEA27480.1| GMP synthase (glutamine-hydrolyzing) [Pseudonocardia dioxanivorans
CB1190]
Length = 526
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE--CRLCVRKKIVE 62
A+ SGG DS+ + DR+ + D+ G+R +VE + + V+
Sbjct: 229 AVCGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVERDFVAATGAKLHTVD 288
Query: 63 LMPKWKDSLG 72
++ +L
Sbjct: 289 AADRFLGALA 298
>gi|307707803|ref|ZP_07644280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis NCTC 12261]
gi|307616063|gb|EFN95259.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis NCTC 12261]
Length = 373
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M++ K ++ SGG DSS ++ V +
Sbjct: 1 MSENSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|295696782|ref|YP_003590020.1| argininosuccinate synthase [Bacillus tusciae DSM 2912]
gi|295412384|gb|ADG06876.1| argininosuccinate synthase [Bacillus tusciae DSM 2912]
Length = 425
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYG 43
P +L +SGG D+S ++W ++F V L D G
Sbjct: 2 SKPKIVLAYSGGLDTSVAIAWLKEKFEYDVVALCLDVG 39
>gi|295706703|ref|YP_003599778.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus megaterium DSM 319]
gi|294804362|gb|ADF41428.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus megaterium DSM 319]
Length = 370
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS + V +
Sbjct: 6 KDTRVVVGMSGGVDSSVAALLLKQQGYDVIGI 37
>gi|294501356|ref|YP_003565056.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus megaterium QM B1551]
gi|294351293|gb|ADE71622.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacillus megaterium QM B1551]
Length = 370
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS + V +
Sbjct: 6 KDTRVVVGMSGGVDSSVAALLLKQQGYDVIGI 37
>gi|295687578|ref|YP_003591271.1| argininosuccinate synthase [Caulobacter segnis ATCC 21756]
gi|295429481|gb|ADG08653.1| argininosuccinate synthase [Caulobacter segnis ATCC 21756]
Length = 408
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-- 62
K +L +SGG D+S L W + V T + D GQ ++E + +
Sbjct: 4 KPVKKVVLAYSGGLDTSIILKWLQTEHNAEVVTFTADLGQGEEIEPARAKALAAGVKPEN 63
Query: 63 -LMPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 64 IFIEDVREEFVRDYVFPM 81
>gi|289577704|ref|YP_003476331.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
gi|289527417|gb|ADD01769.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
Length = 300
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
N + +K L + SGG+DS + V + + G
Sbjct: 41 NRMFEKGEKVLAVVSGGKDSMALWDILVKEGYNVVAMYINLG 82
>gi|254521475|ref|ZP_05133530.1| argininosuccinate synthase [Stenotrophomonas sp. SKA14]
gi|219719066|gb|EED37591.1| argininosuccinate synthase [Stenotrophomonas sp. SKA14]
Length = 403
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
M+ +L FSGG D+S C+ + +R V T+ D G V+ E R + K+
Sbjct: 1 MDLTPMSNKDVVLAFSGGLDTSFCVPYLQERGYNVHTVFADTG---GVDDEERDFIEKRA 57
Query: 61 VEL 63
L
Sbjct: 58 AAL 60
>gi|205814900|sp|Q6MLR7|MNMA_BDEBA RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 360
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY 42
L+ SGG DSS + +++ V + DY
Sbjct: 5 RVLVAMSGGVDSSAAAALLVEQGYEVIGATMQVWDY 40
>gi|254423006|ref|ZP_05036724.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Synechococcus sp. PCC 7335]
gi|196190495|gb|EDX85459.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Synechococcus sp. PCC 7335]
Length = 365
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
++ SGG DSS + ++ V L+
Sbjct: 3 KIVVGLSGGVDSSVAAATLHNQGHEVIGLT 32
>gi|120402525|ref|YP_952354.1| GMP synthase [Mycobacterium vanbaalenii PYR-1]
gi|119955343|gb|ABM12348.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium vanbaalenii
PYR-1]
Length = 522
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 17/113 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE---------CRL 54
A+ SGG DS+ + DR+ + D+ G+R +V+ + +
Sbjct: 219 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRSGERAQVQRDFVAATGANLVTV 278
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
V + +E + + G+ I+ + + ++ +++P F
Sbjct: 279 DVADRFLEALSGVTNPEGKRKIIGREFIRAFEGA--VRDALESQDGSDVPVEF 329
>gi|209529646|ref|NP_001129348.1| mitochondrial tRNA-specific 2-thiouridylase 1 [Rattus norvegicus]
gi|149065691|gb|EDM15564.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 417
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + SGG DS+ R +V +
Sbjct: 1 MSALRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|323700751|ref|ZP_08112663.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfovibrio sp. ND132]
gi|323460683|gb|EGB16548.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Desulfovibrio desulfuricans ND132]
Length = 345
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DS L+ +R + + +
Sbjct: 5 VAVSGGMDSLLALALLKERGEPLLAVH 31
>gi|307705802|ref|ZP_07642645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis SK597]
gi|307620634|gb|EFN99727.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus mitis SK597]
Length = 373
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M++ K ++ SGG DSS ++ V +
Sbjct: 1 MSENSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|257454474|ref|ZP_05619734.1| glutamine-dependent NAD(+) synthetase [Enhydrobacter aerosaccus
SK60]
gi|257448132|gb|EEV23115.1| glutamine-dependent NAD(+) synthetase [Enhydrobacter aerosaccus
SK60]
Length = 614
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
L+ SGG DS+ L A+D D+V + Y +++ L+ ++
Sbjct: 351 KGVLVGLSGGIDSALTLCIAVDALGADKVYAVMMPYEYTSQISLQDAQAQAHRL 404
>gi|255975449|ref|ZP_05426035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis T2]
gi|256961498|ref|ZP_05565669.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis Merz96]
gi|293385188|ref|ZP_06631008.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis R712]
gi|293388180|ref|ZP_06632702.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis S613]
gi|307277736|ref|ZP_07558822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0860]
gi|312908274|ref|ZP_07767238.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis DAPTO 512]
gi|312910654|ref|ZP_07769495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis DAPTO 516]
gi|255968321|gb|EET98943.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis T2]
gi|256951994|gb|EEU68626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis Merz96]
gi|291077561|gb|EFE14925.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis R712]
gi|291082420|gb|EFE19383.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis S613]
gi|306505615|gb|EFM74799.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0860]
gi|310625688|gb|EFQ08971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis DAPTO 512]
gi|311289030|gb|EFQ67586.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis DAPTO 516]
Length = 374
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MADNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|229545347|ref|ZP_04434072.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX1322]
gi|257084787|ref|ZP_05579148.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis Fly1]
gi|229309554|gb|EEN75541.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX1322]
gi|256992817|gb|EEU80119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis Fly1]
Length = 374
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MADNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|257791282|ref|YP_003181888.1| GMP synthase, large subunit [Eggerthella lenta DSM 2243]
gi|257475179|gb|ACV55499.1| GMP synthase, large subunit [Eggerthella lenta DSM 2243]
Length = 327
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + + ++ + ++G
Sbjct: 37 KKVLLALSGGVDSSVVAALLIKAIGKQLICVHVNHG 72
>gi|219558179|ref|ZP_03537255.1| asparagine synthetase asnB [Mycobacterium tuberculosis T17]
Length = 419
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 284 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 331
>gi|210631316|ref|ZP_03296859.1| hypothetical protein COLSTE_00744 [Collinsella stercoris DSM
13279]
gi|210160083|gb|EEA91054.1| hypothetical protein COLSTE_00744 [Collinsella stercoris DSM
13279]
Length = 445
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRK 58
+L +SGG D+S C+ W + D V + + GQ + + ++
Sbjct: 13 KEKVVLAYSGGLDTSVCIKWLQNEMDLDVIAMLGNVGQEHDGLEKVAAKAKQ 64
>gi|254463393|ref|ZP_05076809.1| argininosuccinate synthase [Rhodobacterales bacterium HTCC2083]
gi|206679982|gb|EDZ44469.1| argininosuccinate synthase [Rhodobacteraceae bacterium HTCC2083]
Length = 406
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 18/134 (13%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W + V T + D GQ ++E + ++
Sbjct: 1 MTAPKKVVLAYSGGLDTSIILKWLETEYGCEVVTFTADLGQGEELEPARAKAELMGVKDI 60
Query: 64 -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
+ ++ D + P+ + ++ +
Sbjct: 61 YIEDVREEFVRDFVFPMFRANAVYEGLYLLGTSIARP---------------LISKRLIE 105
Query: 122 LAYRLGITNIVIGV 135
+A +G I G
Sbjct: 106 IAEEVGADAIAHGA 119
>gi|119612004|gb|EAW91598.1| hCG1741694, isoform CRA_a [Homo sapiens]
Length = 252
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
+L SGG D+S L W ++ V + GQ+ E + +
Sbjct: 2 VLAHSGGLDTSCMLVWLKEQGHVVIAYLANIGQKEDFEKDRKKA 45
>gi|118469075|ref|YP_888546.1| asparagine synthase (glutamine-hydrolyzing) [Mycobacterium
smegmatis str. MC2 155]
gi|118170362|gb|ABK71258.1| asparagine synthase (glutamine-hydrolyzing) [Mycobacterium
smegmatis str. MC2 155]
Length = 658
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 290 LSGGIDSTAIAALAMRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 337
>gi|15888965|ref|NP_354646.1| NAD synthetase [Agrobacterium tumefaciens str. C58]
gi|15156746|gb|AAK87431.1| NAD (+) synthetase [Agrobacterium tumefaciens str. C58]
Length = 559
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVEL---ECRLCVR 57
+ K +++L SGG DS+ C + A+D +RV + Y R E + C R
Sbjct: 287 VNKNGFKSVVLGLSGGIDSAICAALAVDALGEERVRCIMLPY--RYTSEESLKDAADCAR 344
>gi|21312518|ref|NP_082339.1| mitochondrial tRNA-specific 2-thiouridylase 1 [Mus musculus]
gi|14195274|sp|Q9DAT5|MTU1_MOUSE RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1
gi|12838169|dbj|BAB24110.1| unnamed protein product [Mus musculus]
gi|26335739|dbj|BAC31570.1| unnamed protein product [Mus musculus]
gi|26336146|dbj|BAC31758.1| unnamed protein product [Mus musculus]
gi|33867793|gb|AAQ55218.1| 5'methylaminomethyl-2-thiouridylate-methyltransferase [Mus
musculus]
gi|38512243|gb|AAH61026.1| TRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Mus
musculus]
gi|148672470|gb|EDL04417.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Mus
musculus]
Length = 417
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + SGG DS+ R +V +
Sbjct: 1 MSALRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|120554680|ref|YP_959031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Marinobacter aquaeolei VT8]
gi|205816919|sp|A1U1H5|MNMA_MARAV RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|120324529|gb|ABM18844.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Marinobacter aquaeolei VT8]
Length = 392
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 43/146 (29%), Gaps = 25/146 (17%)
Query: 1 MNDIIKKAPSA----LLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVE------ 49
M + A ++ SGG DSS D+ +VE L ++ + + E
Sbjct: 1 MTQNTEPQSPAHTRVIVGMSGGVDSSVAAWLLKDQGYQVEGLFMKNWDEDDGTEYCTAMT 60
Query: 50 -LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
L V I + + + L + S T N + V
Sbjct: 61 DLADAQAVADAIGIKLHTASFAAEYWDRVFEHFLSEYSAG-RTPNPDILCNKE------V 113
Query: 109 PGRNIIFLVFAATLAYRLGITNIVIG 134
R FL A LG I G
Sbjct: 114 KFR--AFLD----YAVTLGADYIATG 133
>gi|307287836|ref|ZP_07567872.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0109]
gi|306501170|gb|EFM70476.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0109]
gi|315164727|gb|EFU08744.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX1302]
Length = 374
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MADNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|238753908|ref|ZP_04615268.1| NAD+ synthase [Yersinia ruckeri ATCC 29473]
gi|238707896|gb|EEQ00254.1| NAD+ synthase [Yersinia ruckeri ATCC 29473]
Length = 549
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 11/82 (13%)
Query: 9 PSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
A+L SGG DS+ L+ A+ + + F Y + + K+ E++
Sbjct: 290 KGAVLGLSGGIDSALTLAIAVDALGKEKVQALMMPFRY------TADISIADAKEEAEIL 343
Query: 65 PKWKDSLGEDHILPLAILGDIS 86
D L + + A +G ++
Sbjct: 344 GIEFDLLSIEPMFD-AFMGQLA 364
>gi|120602664|ref|YP_967064.1| tRNA(Ile)-lysidine synthetase [Desulfovibrio vulgaris DP4]
gi|120562893|gb|ABM28637.1| tRNA(Ile)-lysidine synthetase [Desulfovibrio vulgaris DP4]
Length = 390
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 7 KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ ++ SGG DS+ L + L D+G R + E R V
Sbjct: 61 RNCHCVVALSGGADSTALLLILHYLRQRLGLSLSALHVDHGLRPESAAEARAAV 114
>gi|46579870|ref|YP_010678.1| hypothetical protein DVU1459 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449286|gb|AAS95937.1| conserved domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234129|gb|ADP86983.1| tRNA(Ile)-lysidine synthetase [Desulfovibrio vulgaris RCH1]
Length = 390
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 7 KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ ++ SGG DS+ L + L D+G R + E R V
Sbjct: 61 RNCHCVVALSGGADSTALLLILHYLRQRLGLSLSALHVDHGLRPESAAEARAAV 114
>gi|14520383|ref|NP_125858.1| NAD synthetase [Pyrococcus abyssi GE5]
gi|14548122|sp|Q9V2A9|NADE_PYRAB RecName: Full=Probable NH(3)-dependent NAD(+) synthetase
gi|5457598|emb|CAB49089.1| nadE NH(3)-dependent NAD+ synthetase [Pyrococcus abyssi GE5]
Length = 257
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 37/176 (21%)
Query: 20 DSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHIL 77
DS+T A ++V L Y + VE K +VE + + I+
Sbjct: 34 DSATVTYLATKALGREKVLGLIMPYYENQDVE------DAKLVVESLGIEYRVINIRPIV 87
Query: 78 PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
++ + +++ +L N V R + ++ A+ + +V+G
Sbjct: 88 D----------TIVSEIGIELDKKSLGN--VMARTRMMIL----YAHANSMNRMVLGTS- 130
Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
R + + T G + + PL+ L K E W++A+ IG + +
Sbjct: 131 --------NRSEFLTGYFTKWGDG----ASDYAPLINLYKTEVWEIAKRIGVPERI 174
>gi|83950756|ref|ZP_00959489.1| argininosuccinate synthase [Roseovarius nubinhibens ISM]
gi|83838655|gb|EAP77951.1| argininosuccinate synthase [Roseovarius nubinhibens ISM]
Length = 408
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ EL+ + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELDPARKKAELL 55
>gi|326568719|gb|EGE18789.1| argininosuccinate synthase [Moraxella catarrhalis BC8]
Length = 448
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S L W + + + GQ ++ + K+ + + D
Sbjct: 20 FSGGLDTSAALLWMKQKGALPYAYTANLGQPDEDDYNAIPTKAKQYGAVKARLVD 74
>gi|326565466|gb|EGE15637.1| argininosuccinate synthase [Moraxella catarrhalis 12P80B1]
Length = 448
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S L W + + + GQ ++ + K+ + + D
Sbjct: 20 FSGGLDTSAALLWMKQKGALPYAYTANLGQPDEDDYNAIPTKAKQYGAVKARLVD 74
>gi|326562714|gb|EGE13016.1| argininosuccinate synthase [Moraxella catarrhalis 103P14B1]
gi|326568594|gb|EGE18665.1| argininosuccinate synthase [Moraxella catarrhalis BC7]
gi|326574184|gb|EGE24132.1| argininosuccinate synthase [Moraxella catarrhalis 101P30B1]
gi|326575623|gb|EGE25547.1| argininosuccinate synthase [Moraxella catarrhalis O35E]
Length = 448
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S L W + + + GQ ++ + K+ + + D
Sbjct: 20 FSGGLDTSAALLWMKQKGALPYAYTANLGQPDEDDYNAIPTKAKQYGAVKARLVD 74
>gi|312877002|ref|ZP_07736976.1| PP-loop domain protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796233|gb|EFR12588.1| PP-loop domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 303
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + K L++ SGG+DS V + + G
Sbjct: 41 HRMFDKKDKVLVVISGGKDSMALWHILASEGYNVTGMYINLG 82
>gi|298675753|ref|YP_003727503.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanohalobium evestigatum Z-7303]
gi|298288741|gb|ADI74707.1| thiamine biosynthesis/tRNA modification protein ThiI
[Methanohalobium evestigatum Z-7303]
Length = 362
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 32/182 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPKWK 68
+ L SGG DS + R + + D Y E K+V+ + +++
Sbjct: 171 VALMSGGIDSPVAAYMMMKRGCSIIPIYVDIDPYLGEKGKER------AFKVVDALKQYQ 224
Query: 69 DSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+ + I L I + I L R +A L
Sbjct: 225 PGIELEVIGDDYLYTAKKILKHYNSDKYTCLICKRRL------YR----------IAEDL 268
Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
+G+ D G + ++ L +++ V+ PL+ K E +A+
Sbjct: 269 ANKYKALGIVTGDSLG-----QVASQTLDNLYVLDEATNLPVYRPLIGFDKEEVIDIARR 323
Query: 187 IG 188
IG
Sbjct: 324 IG 325
>gi|296113545|ref|YP_003627483.1| argininosuccinate synthase [Moraxella catarrhalis RH4]
gi|295921239|gb|ADG61590.1| argininosuccinate synthase [Moraxella catarrhalis RH4]
gi|326559548|gb|EGE09962.1| argininosuccinate synthase [Moraxella catarrhalis 7169]
gi|326564650|gb|EGE14868.1| argininosuccinate synthase [Moraxella catarrhalis 46P47B1]
gi|326567769|gb|EGE17875.1| argininosuccinate synthase [Moraxella catarrhalis BC1]
gi|326572588|gb|EGE22577.1| argininosuccinate synthase [Moraxella catarrhalis CO72]
Length = 448
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S L W + + + GQ ++ + K+ + + D
Sbjct: 20 FSGGLDTSAALLWMKQKGALPYAYTANLGQPDEDDYNAIPTKAKQYGAVKARLVD 74
>gi|188581502|ref|YP_001924947.1| argininosuccinate synthase [Methylobacterium populi BJ001]
gi|179345000|gb|ACB80412.1| Argininosuccinate synthase [Methylobacterium populi BJ001]
Length = 413
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 1 MND--IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
M+D K +L +SGG D+S L W + V T + D GQ ++E R
Sbjct: 1 MSDASPNKSVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEPARRKAEL 60
Query: 58 KKIVE---LMPKWKDSLGEDHILPL 79
I + ++ D++ P+
Sbjct: 61 LGIKPENIFIEDLREEFVRDYVFPM 85
>gi|218530522|ref|YP_002421338.1| argininosuccinate synthase [Methylobacterium chloromethanicum
CM4]
gi|218522825|gb|ACK83410.1| Argininosuccinate synthase [Methylobacterium chloromethanicum
CM4]
Length = 413
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 1 MND--IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
M+D K +L +SGG D+S L W + V T + D GQ ++E R
Sbjct: 1 MSDALPNKSVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEPARRKAEL 60
Query: 58 KKIVE---LMPKWKDSLGEDHILPL 79
I + ++ D++ P+
Sbjct: 61 LGIKPENIFIEDLREEFVRDYVFPM 85
>gi|154149044|ref|YP_001406760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter hominis ATCC BAA-381]
gi|205811613|sp|A7I2L9|MNMA_CAMHC RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|153805053|gb|ABS52060.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Campylobacter hominis ATCC BAA-381]
Length = 368
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 41/130 (31%), Gaps = 20/130 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
L+ SGG DS+ D +E Y ++L R K +E + +
Sbjct: 2 KILVALSGGVDSAVSAKILKDAGYEIEG---CY-----MKLHGRDDYHAKNIEKVQDVGN 53
Query: 70 SLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAY 124
L HIL L D + + + PN P R I F F A
Sbjct: 54 FLEIKTHILDLC---DDFKREVFEPFLQTYKVGKTPN---PCALCNRTIKFGKF-LDFAR 106
Query: 125 RLGITNIVIG 134
G I G
Sbjct: 107 SKGCDKIATG 116
>gi|163851716|ref|YP_001639759.1| argininosuccinate synthase [Methylobacterium extorquens PA1]
gi|254561488|ref|YP_003068583.1| argininosuccinate synthase [Methylobacterium extorquens DM4]
gi|163663321|gb|ABY30688.1| Argininosuccinate synthase [Methylobacterium extorquens PA1]
gi|254268766|emb|CAX24727.1| argininosuccinate synthase (citrulline-aspartate ligase)
[Methylobacterium extorquens DM4]
Length = 413
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 1 MND--IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
M+D K +L +SGG D+S L W + V T + D GQ ++E R
Sbjct: 1 MSDALPNKSVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEPARRKAEL 60
Query: 58 KKIVE---LMPKWKDSLGEDHILPL 79
I + ++ D++ P+
Sbjct: 61 LGIKPENIFIEDLREEFVRDYVFPM 85
>gi|329568350|gb|EGG50159.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX1467]
Length = 374
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MADNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|328950301|ref|YP_004367636.1| Argininosuccinate synthase [Marinithermus hydrothermalis DSM
14884]
gi|328450625|gb|AEB11526.1| Argininosuccinate synthase [Marinithermus hydrothermalis DSM
14884]
Length = 398
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
+L +SGG D+S L W + + V + D GQ +VE + +
Sbjct: 2 KIVLAYSGGLDTSIILKWLKETYGAEVIAFTADIGQGEEVEEARQKALA 50
>gi|328541853|ref|YP_004301962.1| Argininosuccinate synthase 2 [polymorphum gilvum SL003B-26A1]
gi|326411603|gb|ADZ68666.1| Argininosuccinate synthase 2 [Polymorphum gilvum SL003B-26A1]
Length = 406
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+L +SGG D+S L W V T + D GQ ++E R I E+
Sbjct: 7 KKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARRKAEMLGIKEIF 63
>gi|317490418|ref|ZP_07948901.1| GMP synthase domain-containing protein [Eggerthella sp.
1_3_56FAA]
gi|316910462|gb|EFV32088.1| GMP synthase domain-containing protein [Eggerthella sp.
1_3_56FAA]
Length = 327
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + + ++ + ++G
Sbjct: 37 KKVLLALSGGVDSSVVAALLIKAIGKQLICVHVNHG 72
>gi|315221594|ref|ZP_07863514.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus anginosus F0211]
gi|315189428|gb|EFU23123.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus anginosus F0211]
Length = 373
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDHSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|299136470|ref|ZP_07029653.1| argininosuccinate synthase [Acidobacterium sp. MP5ACTX8]
gi|298600985|gb|EFI57140.1| argininosuccinate synthase [Acidobacterium sp. MP5ACTX8]
Length = 446
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
FSGG D+S L W + + + GQ
Sbjct: 18 FSGGLDTSAALHWMKQKGALPYAYTANLGQ 47
>gi|317131154|ref|YP_004090468.1| argininosuccinate synthase [Ethanoligenens harbinense YUAN-3]
gi|315469133|gb|ADU25737.1| argininosuccinate synthase [Ethanoligenens harbinense YUAN-3]
Length = 404
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
+KK ++L +SGG D+S + W + + V +S D GQ EL KK
Sbjct: 1 MKKTYKKVVLAYSGGLDTSIIIPWLKENYGCEVIAMSADVGQ--GEELSGLEEKAKK 55
>gi|269123624|ref|YP_003306201.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Streptobacillus moniliformis DSM 12112]
gi|268314950|gb|ACZ01324.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
[Streptobacillus moniliformis DSM 12112]
Length = 359
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+L SGG DSS + V +
Sbjct: 1 MKKRVVLGMSGGVDSSVAAILLKEAGYEVIGV 32
>gi|257416449|ref|ZP_05593443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis AR01/DG]
gi|257158277|gb|EEU88237.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis ARO1/DG]
Length = 374
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MADNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|257082170|ref|ZP_05576531.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis E1Sol]
gi|256990200|gb|EEU77502.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis E1Sol]
Length = 374
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MADNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|254440061|ref|ZP_05053555.1| argininosuccinate synthase [Octadecabacter antarcticus 307]
gi|198255507|gb|EDY79821.1| argininosuccinate synthase [Octadecabacter antarcticus 307]
Length = 410
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLC 55
M+ + +L +SGG D+S L W + V T + D GQ ++E
Sbjct: 1 MSKVTA-PKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA 55
>gi|29376579|ref|NP_815733.1| tRNA-specific 2-thiouridylase MnmA [Enterococcus faecalis V583]
gi|227520188|ref|ZP_03950237.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0104]
gi|227555378|ref|ZP_03985425.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis HH22]
gi|256762940|ref|ZP_05503520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis T3]
gi|256853584|ref|ZP_05558949.1| tRNA-specific 2-thiouridylase mnmA [Enterococcus faecalis T8]
gi|257079445|ref|ZP_05573806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis JH1]
gi|257087270|ref|ZP_05581631.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis D6]
gi|257090346|ref|ZP_05584707.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis CH188]
gi|257419691|ref|ZP_05596685.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis T11]
gi|257422150|ref|ZP_05599140.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis X98]
gi|294780347|ref|ZP_06745716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis PC1.1]
gi|307270242|ref|ZP_07551555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX4248]
gi|307295656|ref|ZP_07575491.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0411]
gi|312900841|ref|ZP_07760135.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0470]
gi|312902847|ref|ZP_07762051.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0635]
gi|73920123|sp|Q820U1|MNMA_ENTFA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|29344043|gb|AAO81803.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis V583]
gi|227072360|gb|EEI10323.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0104]
gi|227175492|gb|EEI56464.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis HH22]
gi|256684191|gb|EEU23886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis T3]
gi|256710527|gb|EEU25570.1| tRNA-specific 2-thiouridylase mnmA [Enterococcus faecalis T8]
gi|256987475|gb|EEU74777.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis JH1]
gi|256995300|gb|EEU82602.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis D6]
gi|256999158|gb|EEU85678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis CH188]
gi|257161519|gb|EEU91479.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis T11]
gi|257163974|gb|EEU93934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis X98]
gi|294452611|gb|EFG21044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis PC1.1]
gi|306496368|gb|EFM65945.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0411]
gi|306513458|gb|EFM82077.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX4248]
gi|310633901|gb|EFQ17184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0635]
gi|311291940|gb|EFQ70496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0470]
gi|315025815|gb|EFT37747.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX2137]
gi|315028590|gb|EFT40522.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX4000]
gi|315031109|gb|EFT43041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0017]
gi|315149261|gb|EFT93277.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0012]
gi|315157187|gb|EFU01204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0043]
gi|315171619|gb|EFU15636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX1342]
gi|315173202|gb|EFU17219.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX1346]
gi|315575062|gb|EFU87253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0309B]
gi|315576621|gb|EFU88812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0630]
gi|315582488|gb|EFU94679.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0309A]
gi|327535526|gb|AEA94360.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis OG1RF]
Length = 374
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MADNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|327393518|dbj|BAK10940.1| tRNA 5-methylaminomethyl-2- thiouridylate-methyltransferase TrmU
[Pantoea ananatis AJ13355]
Length = 370
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 1 MSDNCQK--KVIVGMSGGVDSSVSAWLLQQQGYQVEGL 36
>gi|293604199|ref|ZP_06686607.1| sulfate adenylyltransferase subunit 2 [Achromobacter piechaudii
ATCC 43553]
gi|292817424|gb|EFF76497.1| sulfate adenylyltransferase subunit 2 [Achromobacter piechaudii
ATCC 43553]
Length = 302
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF 32
M ++ ++ +LLFSGG+DS L A F
Sbjct: 21 MREVAAESEKPVLLFSGGKDSVVLLRLAEKAF 52
>gi|300024843|ref|YP_003757454.1| argininosuccinate synthase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526664|gb|ADJ25133.1| argininosuccinate synthase [Hyphomicrobium denitrificans ATCC
51888]
Length = 409
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE 49
M K +L +SGG D+S L W + + V T + D GQ ++E
Sbjct: 1 MTAAPKAVKKVVLAYSGGLDTSIILKWLQETYNAEVVTFTADLGQGEELE 50
>gi|238019350|ref|ZP_04599776.1| hypothetical protein VEIDISOL_01214 [Veillonella dispar ATCC 17748]
gi|237864049|gb|EEP65339.1| hypothetical protein VEIDISOL_01214 [Veillonella dispar ATCC 17748]
Length = 363
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 35/136 (25%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF-------DYGQRNKVELECRLCVRKKIVELMP 65
+ SGG DSS + L + +V ++ Y + + KK+ + +
Sbjct: 17 VAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPYDS-----VPLAVTDAKKMCDFLG 71
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNI---IFLVF 118
E H++ D+ + ++ + PN P +NI + L
Sbjct: 72 I------EHHVID---ARDVFYDNVVDYFVKEYAYGRTPN---PCVFCNKNIKFDLMLNR 119
Query: 119 AATLAYRLGITNIVIG 134
A LG T++V G
Sbjct: 120 AL----ELGATHMVTG 131
>gi|229549592|ref|ZP_04438317.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis ATCC 29200]
gi|255972288|ref|ZP_05422874.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis T1]
gi|256956522|ref|ZP_05560693.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis DS5]
gi|256963413|ref|ZP_05567584.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis HIP11704]
gi|300860987|ref|ZP_07107074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TUSoD Ef11]
gi|307272736|ref|ZP_07553983.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0855]
gi|312951194|ref|ZP_07770097.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0102]
gi|229305257|gb|EEN71253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis ATCC 29200]
gi|255963306|gb|EET95782.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis T1]
gi|256947018|gb|EEU63650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis DS5]
gi|256953909|gb|EEU70541.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis HIP11704]
gi|300850026|gb|EFK77776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TUSoD Ef11]
gi|306510350|gb|EFM79373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0855]
gi|310630859|gb|EFQ14142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0102]
gi|315034636|gb|EFT46568.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0027]
gi|315143340|gb|EFT87356.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX2141]
gi|315152679|gb|EFT96695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0031]
gi|315159473|gb|EFU03490.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0312]
gi|315161320|gb|EFU05337.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis TX0645]
gi|323481203|gb|ADX80642.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecalis 62]
Length = 374
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MADNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|158300718|ref|XP_320574.3| AGAP011960-PA [Anopheles gambiae str. PEST]
gi|157013296|gb|EAA00244.3| AGAP011960-PA [Anopheles gambiae str. PEST]
Length = 377
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRV 35
++ SGG DS+ R V
Sbjct: 3 RRVVVGISGGVDSAVSAYLLKKRGFEV 29
>gi|314055117|ref|YP_004063455.1| putative asparagine synthetase [Ostreococcus tauri virus 2]
gi|313575008|emb|CBI70021.1| putative asparagine synthetase [Ostreococcus tauri virus 2]
Length = 506
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
L SGG DSS + A + R+ T S G +LE V +
Sbjct: 216 LLSGGLDSSLIAAIAARKIGRIRTFSI--GLEGSPDLEAARKVADYLA 261
>gi|328948437|ref|YP_004365774.1| tRNA sulfurtransferase [Treponema succinifaciens DSM 2489]
gi|328448761|gb|AEB14477.1| tRNA sulfurtransferase [Treponema succinifaciens DSM 2489]
Length = 409
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 57/187 (30%), Gaps = 35/187 (18%)
Query: 19 QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
DS + R +VE + F + +K V+ + K G D L
Sbjct: 194 IDSPVAGYRMMRRGMKVECVYF-----HSYPYTSEEAQQK--VQDLAKIIAQYGNDTHLN 246
Query: 79 LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF-----AATLAYRLGITNIVI 133
+ ++ + +K + +T + L A LA R+ I+
Sbjct: 247 VISFTEV-------QMKIKQKTPEAYST-------LMLRLCMMKAANMLAERINCDCIIT 292
Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
G + + IE + + PL+ L K E A IG +
Sbjct: 293 GESLGQVAS---------QTIENLAVTESFAEKPLVRPLIGLDKEEIMDTANFIGTYETS 343
Query: 194 NLILEES 200
L E+
Sbjct: 344 ILPYEDC 350
>gi|313203122|ref|YP_004041779.1| tRNA(ile)-lysidine synthetase [Paludibacter propionicigenes WB4]
gi|312442438|gb|ADQ78794.1| tRNA(Ile)-lysidine synthetase [Paludibacter propionicigenes WB4]
Length = 441
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 38/139 (27%), Gaps = 22/139 (15%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
++ ++ SGG DS L ++ R E + + +
Sbjct: 12 QQLLNPKARVIVGVSGGTDSVVLLHILHVLGYECVVAHCNFHLR-MEESDRDEEFVRALS 70
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
+ M S+ D + + +++++ +L +
Sbjct: 71 KTMKLPFYSIDFDTV----------SYADRHGISIEMAARDLRYEWF-----------HD 109
Query: 122 LAYRLGITNIVIGVCETDY 140
L +L I + D
Sbjct: 110 LLKKLDAEAIAVAHHADDS 128
>gi|304407559|ref|ZP_07389211.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paenibacillus curdlanolyticus YK9]
gi|304343510|gb|EFM09352.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paenibacillus curdlanolyticus YK9]
Length = 376
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 11/34 (32%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS V +
Sbjct: 4 TKAETRVVVGMSGGVDSSVTALLLKQEGYDVIGI 37
>gi|291617068|ref|YP_003519810.1| TrmU [Pantoea ananatis LMG 20103]
gi|291152098|gb|ADD76682.1| TrmU [Pantoea ananatis LMG 20103]
Length = 376
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D +K ++ SGG DSS + +VE L
Sbjct: 7 MSDNCQK--KVIVGMSGGVDSSVSAWLLQQQGYQVEGL 42
>gi|145641507|ref|ZP_01797085.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus influenzae R3021]
gi|145273798|gb|EDK13666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus influenzae 22.4-21]
Length = 362
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + SGG DSS + +VE L
Sbjct: 2 RQKKVICGMSGGVDSSVSAFILQQQGYQVEGL 33
>gi|88658029|ref|YP_507487.1| argininosuccinate synthase [Ehrlichia chaffeensis str. Arkansas]
gi|119361275|sp|Q2GGE6|ASSY_EHRCR RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|88599486|gb|ABD44955.1| argininosuccinate synthase [Ehrlichia chaffeensis str. Arkansas]
Length = 393
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
+L +SGG D+S L W + + V + D GQ + + + + E+
Sbjct: 2 KKIVLAYSGGLDTSVILKWLQENYNCEVVVFTADLGQNDDMSAIRQKAAASNVKEIFIED 61
Query: 67 WKDSLGEDHILPL 79
K+ +D + P+
Sbjct: 62 LKEEFVKDFVFPM 74
>gi|71064590|ref|YP_263317.1| GMP synthase [Psychrobacter arcticus 273-4]
gi|91206823|sp|Q4FVS5|GUAA_PSYA2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|71037575|gb|AAZ17883.1| GMP synthase (glutamine-hydrolyzing) [Psychrobacter arcticus 273-4]
Length = 536
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 29/195 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + D++ + D G L + ++M +
Sbjct: 233 KQVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDTG----------LLRLHEGDQVMQIF 282
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+++G ++ + ++ ++L + + + TF+ +F A ++ +
Sbjct: 283 AENMGV-KVIRVDA-EELFLTALAGESDPEAKRKIIGKTFID----VFANSAREISEQSD 336
Query: 128 ITNIVIGVCETDYSGYPD---------CRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
I T YPD + I++ L + + PL L K
Sbjct: 337 GKVIEFLAQGT---IYPDVIESAKSHQGKAHVIKSHHNVGGLPDDLAFELVEPLRDLFKD 393
Query: 179 ETWKLAQDIGGQDLV 193
E KL +G +
Sbjct: 394 EVRKLGITLGLPAKM 408
>gi|68172032|ref|ZP_00545321.1| Argininosuccinate synthase [Ehrlichia chaffeensis str. Sapulpa]
gi|67998543|gb|EAM85308.1| Argininosuccinate synthase [Ehrlichia chaffeensis str. Sapulpa]
Length = 387
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
+L +SGG D+S L W + + V + D GQ + + + + E+
Sbjct: 2 KKIVLAYSGGLDTSVILKWLQENYNCEVVVFTADLGQNDDMSAIRQKAAASNVKEIFIED 61
Query: 67 WKDSLGEDHILPL 79
K+ +D + P+
Sbjct: 62 LKEEFVKDFVFPM 74
>gi|325959014|ref|YP_004290480.1| tRNA sulfurtransferase [Methanobacterium sp. AL-21]
gi|325330446|gb|ADZ09508.1| tRNA sulfurtransferase [Methanobacterium sp. AL-21]
Length = 387
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 57/186 (30%), Gaps = 26/186 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ L SGG DS + R + ++F+ E + + K+ E L
Sbjct: 180 ISLVSGGIDSPVATYLMMKRGVDITIVNFNNHPFTSGSNEKIVKIYHKLKEYASGSDFRL 239
Query: 72 GEDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+ + L + + + + + A +A +
Sbjct: 240 LQ---VDYGEFLKKCTEEAPPRMTCVLCKSG-------------MYQIAEKIAKQEKALA 283
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
I+ G + + + + + + V +PL+ L K E ++A+ IG
Sbjct: 284 IIDGSSVGQVAS---------QTLPNILATRYSTSMPVLSPLIGLDKLEISEIAEKIGTF 334
Query: 191 DLVNLI 196
L
Sbjct: 335 QYSILP 340
>gi|312134203|ref|YP_004001541.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
gi|311774254|gb|ADQ03741.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
Length = 303
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + K L++ SGG+DS V + + G
Sbjct: 41 HRMFDKKDKILVVISGGKDSMALWHILAKEGYNVTGMYINLG 82
>gi|299531605|ref|ZP_07045010.1| NAD+ synthetase [Comamonas testosteroni S44]
gi|298720321|gb|EFI61273.1| NAD+ synthetase [Comamonas testosteroni S44]
Length = 548
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 9 PSALLLFSGGQDSSTCLSWALD 30
P AL+ SGG DS+ L+ A+D
Sbjct: 286 PGALIGLSGGMDSALVLAIAVD 307
>gi|228917274|ref|ZP_04080831.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935940|ref|ZP_04098750.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228823708|gb|EEM69530.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228842475|gb|EEM87566.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|228941810|ref|ZP_04104357.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228974735|ref|ZP_04135301.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981330|ref|ZP_04141630.1| Argininosuccinate synthase [Bacillus thuringiensis Bt407]
gi|228778530|gb|EEM26797.1| Argininosuccinate synthase [Bacillus thuringiensis Bt407]
gi|228785138|gb|EEM33151.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818022|gb|EEM64100.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|228987879|ref|ZP_04147988.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228771927|gb|EEM20384.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229013835|ref|ZP_04170963.1| Argininosuccinate synthase [Bacillus mycoides DSM 2048]
gi|228747504|gb|EEL97379.1| Argininosuccinate synthase [Bacillus mycoides DSM 2048]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229019857|ref|ZP_04176658.1| Argininosuccinate synthase [Bacillus cereus AH1273]
gi|229026084|ref|ZP_04182465.1| Argininosuccinate synthase [Bacillus cereus AH1272]
gi|228735237|gb|EEL85851.1| Argininosuccinate synthase [Bacillus cereus AH1272]
gi|228741464|gb|EEL91663.1| Argininosuccinate synthase [Bacillus cereus AH1273]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229062317|ref|ZP_04199637.1| Argininosuccinate synthase [Bacillus cereus AH603]
gi|228716980|gb|EEL68662.1| Argininosuccinate synthase [Bacillus cereus AH603]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229081882|ref|ZP_04214374.1| Argininosuccinate synthase [Bacillus cereus Rock4-2]
gi|228701470|gb|EEL53964.1| Argininosuccinate synthase [Bacillus cereus Rock4-2]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229076132|ref|ZP_04209100.1| Argininosuccinate synthase [Bacillus cereus Rock4-18]
gi|229105258|ref|ZP_04235907.1| Argininosuccinate synthase [Bacillus cereus Rock3-28]
gi|228678184|gb|EEL32412.1| Argininosuccinate synthase [Bacillus cereus Rock3-28]
gi|228706995|gb|EEL59200.1| Argininosuccinate synthase [Bacillus cereus Rock4-18]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229099090|ref|ZP_04230024.1| Argininosuccinate synthase [Bacillus cereus Rock3-29]
gi|229118120|ref|ZP_04247479.1| Argininosuccinate synthase [Bacillus cereus Rock1-3]
gi|228665343|gb|EEL20826.1| Argininosuccinate synthase [Bacillus cereus Rock1-3]
gi|228684318|gb|EEL38262.1| Argininosuccinate synthase [Bacillus cereus Rock3-29]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|228929683|ref|ZP_04092701.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229124200|ref|ZP_04253392.1| Argininosuccinate synthase [Bacillus cereus 95/8201]
gi|228659502|gb|EEL15150.1| Argininosuccinate synthase [Bacillus cereus 95/8201]
gi|228830070|gb|EEM75689.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229135467|ref|ZP_04264254.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST196]
gi|228648028|gb|EEL04076.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST196]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229158237|ref|ZP_04286304.1| Argininosuccinate synthase [Bacillus cereus ATCC 4342]
gi|228625195|gb|EEK81955.1| Argininosuccinate synthase [Bacillus cereus ATCC 4342]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229169357|ref|ZP_04297067.1| Argininosuccinate synthase [Bacillus cereus AH621]
gi|228614120|gb|EEK71235.1| Argininosuccinate synthase [Bacillus cereus AH621]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|229175341|ref|ZP_04302856.1| Argininosuccinate synthase [Bacillus cereus MM3]
gi|228608173|gb|EEK65480.1| Argininosuccinate synthase [Bacillus cereus MM3]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|228954898|ref|ZP_04116918.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960898|ref|ZP_04122531.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229048336|ref|ZP_04193904.1| Argininosuccinate synthase [Bacillus cereus AH676]
gi|229072132|ref|ZP_04205341.1| Argininosuccinate synthase [Bacillus cereus F65185]
gi|229129913|ref|ZP_04258879.1| Argininosuccinate synthase [Bacillus cereus BDRD-Cer4]
gi|229147190|ref|ZP_04275548.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST24]
gi|229192833|ref|ZP_04319791.1| Argininosuccinate synthase [Bacillus cereus ATCC 10876]
gi|228590672|gb|EEK48533.1| Argininosuccinate synthase [Bacillus cereus ATCC 10876]
gi|228636300|gb|EEK92772.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST24]
gi|228653604|gb|EEL09476.1| Argininosuccinate synthase [Bacillus cereus BDRD-Cer4]
gi|228711066|gb|EEL63032.1| Argininosuccinate synthase [Bacillus cereus F65185]
gi|228723061|gb|EEL74438.1| Argininosuccinate synthase [Bacillus cereus AH676]
gi|228798794|gb|EEM45774.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228804887|gb|EEM51486.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|119899062|ref|YP_934275.1| tRNA-specific 2-thiouridylase MnmA [Azoarcus sp. BH72]
gi|205812510|sp|A1K983|MNMA_AZOSB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|119671475|emb|CAL95388.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Azoarcus sp. BH72]
Length = 365
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 17/131 (12%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS + V L + + + C ++ + + D
Sbjct: 2 KVVVGMSGGVDSSVTALLLKQQGYEVTGLFMK---NWEDDDDDEYCSTRQDLVDVASVCD 58
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPGRNIIFLVFAATLA 123
+G D L + + + + + P N+ + R FL A
Sbjct: 59 VIGID--LEVVNFSAEYKDRVFADFLREYEAGRTPNPDILCNSEIKFR--CFLD----HA 110
Query: 124 YRLGITNIVIG 134
+LG I G
Sbjct: 111 MQLGAERIATG 121
>gi|118479773|ref|YP_896924.1| argininosuccinate synthase [Bacillus thuringiensis str. Al Hakam]
gi|229186890|ref|ZP_04314045.1| Argininosuccinate synthase [Bacillus cereus BGSC 6E1]
gi|118418998|gb|ABK87417.1| argininosuccinate synthase [Bacillus thuringiensis str. Al Hakam]
gi|228596627|gb|EEK54292.1| Argininosuccinate synthase [Bacillus cereus BGSC 6E1]
Length = 411
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48
>gi|111023165|ref|YP_706137.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Rhodococcus jostii RHA1]
gi|110822695|gb|ABG97979.1| GMP synthase (glutamine-hydrolyzing)/ GMP synthase [Rhodococcus
jostii RHA1]
Length = 523
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELECRLCVRKKIVEL 63
A+ SGG DS+ + D + + D+ G+R +VE + K++ +
Sbjct: 220 KAICGLSGGVDSAVAAALVQRAIGDNLTCVFVDHGLMRAGERAQVEQDFVAATGAKLITV 279
Query: 64 MPK 66
Sbjct: 280 DAA 282
>gi|332363581|gb|EGJ41362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK1059]
Length = 373
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|332359520|gb|EGJ37339.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK1056]
Length = 373
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|328945150|gb|EGG39305.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK1087]
Length = 373
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|327392817|dbj|BAK10239.1| tRNA(Ile)-lysidine synthase TilS [Pantoea ananatis AJ13355]
Length = 435
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 1 MND---IIKKAPSALLLFSGGQDSSTCLSWALD 30
M+D ++K+ + ++ FSGG DS+ L
Sbjct: 1 MSDFDALLKENDALVVAFSGGLDSTVLLHQLRA 33
>gi|325698055|gb|EGD39936.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK160]
Length = 373
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|296166073|ref|ZP_06848519.1| asparagine synthase 1 [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898568|gb|EFG78128.1| asparagine synthase 1 [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 654
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 20/48 (41%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ + T + + + E++ + + I
Sbjct: 286 LSGGIDSTAIAALAIRHNPNLITFTTGFEREGFSEIDVAVASAEAIGA 333
>gi|291522699|emb|CBK80992.1| argininosuccinate synthase [Coprococcus catus GD/7]
Length = 410
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + F V + GQ ++ LE R + +
Sbjct: 1 MKEKVVLAYSGGLDTTAIIPWLKETFDYEVICCCINVGQGEELNGLEERAKMSGASKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D ED+I+P I + +M
Sbjct: 61 EDIVDEFCEDYIVPCVQANAIYENKYLLGTSMA 93
>gi|289570317|ref|ZP_06450544.1| predicted protein [Mycobacterium tuberculosis T17]
gi|289544071|gb|EFD47719.1| predicted protein [Mycobacterium tuberculosis T17]
Length = 453
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 318 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 365
>gi|317132891|ref|YP_004092205.1| NAD+ synthetase [Ethanoligenens harbinense YUAN-3]
gi|315470870|gb|ADU27474.1| NAD+ synthetase [Ethanoligenens harbinense YUAN-3]
Length = 644
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALD 30
+A +A++ SGG DS+ L A
Sbjct: 343 RAKTAVVAVSGGLDSTLALLVAHR 366
>gi|296140099|ref|YP_003647342.1| argininosuccinate synthase [Tsukamurella paurometabola DSM 20162]
gi|296028233|gb|ADG79003.1| argininosuccinate synthase [Tsukamurella paurometabola DSM 20162]
Length = 473
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
FSGG D+S ++W D+ T + + GQ ++ +++ K+ + + D
Sbjct: 18 FSGGLDTSVAVAWMRDKGAVPCTYTANIGQPDEPDIDAVPGRAKEYGAEIARLVD 72
>gi|160946390|ref|ZP_02093599.1| hypothetical protein PEPMIC_00350 [Parvimonas micra ATCC 33270]
gi|158447506|gb|EDP24501.1| hypothetical protein PEPMIC_00350 [Parvimonas micra ATCC 33270]
Length = 350
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFD 41
SGG DS L V ++ +
Sbjct: 1 MSGGVDSCVACHLLLKEGYEVIGVTMN 27
>gi|125719134|ref|YP_001036267.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus sanguinis SK36]
gi|166235087|sp|A3CRB2|MNMA_STRSV RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|125499051|gb|ABN45717.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative [Streptococcus sanguinis SK36]
Length = 373
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|323342361|ref|ZP_08082593.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463473|gb|EFY08667.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
[Erysipelothrix rhusiopathiae ATCC 19414]
Length = 400
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
++ SGG DS L + +YG+R
Sbjct: 2 MHKKWIVGVSGGPDSMALLDILSKQNIPCVAAHVNYGKR 40
>gi|225569309|ref|ZP_03778334.1| hypothetical protein CLOHYLEM_05391 [Clostridium hylemonae DSM
15053]
gi|225162108|gb|EEG74727.1| hypothetical protein CLOHYLEM_05391 [Clostridium hylemonae DSM
15053]
Length = 272
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 42/187 (22%)
Query: 8 APSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ FSGG DS+ L AL+ V ++ +L+ V +++ L
Sbjct: 20 KEDVVVAFSGGADSALLLRAACDAALENGTDVYAVTVMTKLHPGSDLDTARRVAREMGAL 79
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+L + L + + K + + F R LA
Sbjct: 80 ----------HRVLEIDELDE----AGIKENPVDRCYRCKKSIFRKIR---------ALA 116
Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETW 181
L + ++ G E D Y R ++A+ + + +PL + K E
Sbjct: 117 ETLNVRCVLEGTNEDDLHEY---RPG-LKAL---------KELRILSPLAQCHITKQEVR 163
Query: 182 KLAQDIG 188
+LA+ G
Sbjct: 164 ELARRRG 170
>gi|126642474|ref|YP_001085458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii ATCC 17978]
gi|126388358|gb|ABO12856.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Acinetobacter baumannii ATCC 17978]
Length = 64
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + L + +VE L
Sbjct: 1 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGL 32
>gi|254229089|ref|ZP_04922509.1| NAD+ synthetase [Vibrio sp. Ex25]
gi|262396636|ref|YP_003288489.1| NAD synthetase [Vibrio sp. Ex25]
gi|151938380|gb|EDN57218.1| NAD+ synthetase [Vibrio sp. Ex25]
gi|262340230|gb|ACY54024.1| NAD synthetase [Vibrio sp. Ex25]
Length = 276
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 64/204 (31%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSST---CLSWALDR--------FDRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+T A+++ + + YG Q+++ E
Sbjct: 31 KLQEAGCKSLVLGISGGVDSTTLGRLAQLAVEQLNAESGTDKYQFIAVRLPYGEQKDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L K + KD + H L + ++ N V
Sbjct: 91 AQLALSFIKPTHSVSVNIKDGVDGLHAATDTALQGTGLLPTEADKIDFVKGN------VK 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMIAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + +LA +G +L+
Sbjct: 188 APLFGLSKRQVRELAATLGAPELL 211
>gi|307069664|ref|YP_003878141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Zinderia insecticola CARI]
gi|306482924|gb|ADM89795.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Candidatus Zinderia insecticola CARI]
Length = 365
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 5/40 (12%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL-----SFD 41
+L SGG DSS + +V + F+
Sbjct: 1 MKKKIILAMSGGIDSSITAWLLKKKGYKVIGIFMKNWHFN 40
>gi|295107449|emb|CBL04992.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
subunit [Gordonibacter pamelaeae 7-10-1-b]
Length = 327
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + V + ++ +
Sbjct: 37 QKVLLALSGGVDSSVVAALLIKAIGKQLICVHVNHGLMRKGESEQVVDVFQNQLDANLVY 96
Query: 68 KDSLGEDHILPL 79
D D L L
Sbjct: 97 VD--ATDRFLDL 106
>gi|262306057|gb|ACY45621.1| gln amidotransferase [Ischnura verticalis]
Length = 197
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
LLL SGG DS+ C + D++ T+ D G
Sbjct: 47 LLLASGGVDSTVCAALLRKAIPEDQLITVHIDNG 80
>gi|257063902|ref|YP_003143574.1| thiazole biosynthesis/tRNA modification protein ThiI [Slackia
heliotrinireducens DSM 20476]
gi|256791555|gb|ACV22225.1| thiazole biosynthesis/tRNA modification protein ThiI [Slackia
heliotrinireducens DSM 20476]
Length = 420
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 53/207 (25%), Gaps = 53/207 (25%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I A + L S G DS R + F
Sbjct: 178 PIGTAGKVVCLLSSGIDSPVATWRMARRGATCIGVHFS---------------------- 215
Query: 64 MPKWKDSLGEDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPG-RNII----FLV 117
S E + +A + + + V + P R II +
Sbjct: 216 GRPQTQSTSEYLVDDIAHVFEEFGGIARIFTVPFGDHQRKIAALVPPALRIIIYRRFMMR 275
Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--------HVTVH 169
A +A G +V G ++ + +++ + V
Sbjct: 276 VAERIARDEGAKALVTG-----------------ESLGQVASQTLDNINCTNAVVKMPVL 318
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLI 196
PL+ K E A+ IG D+ +
Sbjct: 319 RPLIGSDKLEIIADAKKIGTYDISSSP 345
>gi|227824500|ref|ZP_03989332.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904999|gb|EEH90917.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 357
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 40/127 (31%), Gaps = 6/127 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
AL+ SGG DSS LD+ + + C + VE
Sbjct: 2 KALIAMSGGVDSSVAAKLMLDQGYECVGCTMKLYNNPDAGCSSKTCCSIRDVEDARSVAV 61
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--AYRLG 127
LG + + D + + A PN + N FL F A A LG
Sbjct: 62 RLGMPYFVF--NYMDEFRRDVMETFARSYTLGKTPNPCIDC-NK-FLKFGALYERAKELG 117
Query: 128 ITNIVIG 134
IV G
Sbjct: 118 CDTIVTG 124
>gi|226365671|ref|YP_002783454.1| GMP synthase [Rhodococcus opacus B4]
gi|226244161|dbj|BAH54509.1| GMP synthetase [Rhodococcus opacus B4]
Length = 523
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 8/71 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE--CRLCVRKKIV 61
A+ SGG DS+ + D + + D+ G+R +VE + R V
Sbjct: 220 KAICGLSGGVDSAVAAALVQRAIGDNLTCVFVDHGLMRAGERAQVEQDFVAATGARLITV 279
Query: 62 ELMPKWKDSLG 72
+ + L
Sbjct: 280 DAADTFIGELA 290
>gi|254478162|ref|ZP_05091544.1| argininosuccinate synthase [Carboxydibrachium pacificum DSM
12653]
gi|214035891|gb|EEB76583.1| argininosuccinate synthase [Carboxydibrachium pacificum DSM
12653]
Length = 404
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 12 LLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE-LMPKWKD 69
+L +SGG D+S + W + ++ + + D GQR + + + + K+
Sbjct: 2 VLAYSGGLDTSVIIPWLKENYECEIIAVCVDVGQREDLRYIKDKALASGASKVYIEDVKE 61
Query: 70 SLGEDHILPLAILGDI 85
+D+I P G I
Sbjct: 62 EFVKDYIFPTLKAGAI 77
>gi|210620567|ref|ZP_03292115.1| hypothetical protein CLOHIR_00058 [Clostridium hiranonis DSM 13275]
gi|210155281|gb|EEA86287.1| hypothetical protein CLOHIR_00058 [Clostridium hiranonis DSM 13275]
Length = 430
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
LL SGG DSS + + ++ + ++G K E E + + K
Sbjct: 136 KKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKGESESVVEIFK 186
>gi|220935618|ref|YP_002514517.1| Argininosuccinate synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|219996928|gb|ACL73530.1| Argininosuccinate synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 404
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+L +SGG D+S L W D + V T + D GQ ++E + E+
Sbjct: 6 KKVVLAYSGGLDTSVILKWLEDTYGCEVVTFTADIGQGEELEPARTKAQAMGVKEIY 62
>gi|329765674|ref|ZP_08257244.1| argininosuccinate synthase [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137842|gb|EGG42108.1| argininosuccinate synthase [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 399
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+L FSGG D+S + + + +D V T++ D GQ
Sbjct: 1 MTEKGILAFSGGLDTSVVVKYLQEEYDMDVITVTVDVGQ 39
>gi|317154147|ref|YP_004122195.1| PP-loop domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944398|gb|ADU63449.1| PP-loop domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 309
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ L+ SGG+DS + + + V L D G
Sbjct: 42 KMFTHEERILVALSGGKDSLSLMLELAAQGYDVTGLHIDLG 82
>gi|255264616|ref|ZP_05343958.1| GMP synthase (glutamine-hydrolyzing) [Thalassiobium sp. R2A62]
gi|255106951|gb|EET49625.1| GMP synthase (glutamine-hydrolyzing) [Thalassiobium sp. R2A62]
Length = 520
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 58/192 (30%), Gaps = 31/192 (16%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ SGG DSS + D++ + D+G R ++V +
Sbjct: 222 NKQVICGLSGGVDSSVAAVLLHEAIGDQLTCVFVDHG-------LLRKGEADEVVTMFRD 274
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YR 125
+ LG++ S + I +F+ A
Sbjct: 275 NYNMKLIHADEQDLFLGELDGQSDPETKRKIIGK-------------LFIDVFQKYANEI 321
Query: 126 LGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
G + G D +SG P TI++ L + + + PL L K E
Sbjct: 322 DGAEFLAQGTLYPDVIESVSFSGGP---SATIKSHHNVGGLPEKMGLKLVEPLRELFKDE 378
Query: 180 TWKLAQDIGGQD 191
L +++G
Sbjct: 379 VRALGRELGLPA 390
>gi|291542284|emb|CBL15394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruminococcus bromii L2-63]
Length = 357
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
AL+ SGG DSS D ++
Sbjct: 1 MTNKALIAMSGGVDSSVAAFLTKDMGYDATGIT 33
>gi|154496654|ref|ZP_02035350.1| hypothetical protein BACCAP_00946 [Bacteroides capillosus ATCC
29799]
gi|150273906|gb|EDN01006.1| hypothetical protein BACCAP_00946 [Bacteroides capillosus ATCC
29799]
Length = 168
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + V + ++ +
Sbjct: 37 KKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLLRKGEPEQVVKVFRDEMDANLVY 96
Query: 68 KDSLG 72
D++
Sbjct: 97 VDAVD 101
>gi|119944017|ref|YP_941697.1| argininosuccinate synthase [Psychromonas ingrahamii 37]
gi|171704613|sp|A1SRI3|ASSY_PSYIN RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|119862621|gb|ABM02098.1| argininosuccinate synthase [Psychromonas ingrahamii 37]
Length = 402
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 12/77 (15%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELECRLCVRKKIVE 62
+ K +L +SGG D+S + W + +D E ++F D GQ + +
Sbjct: 1 MSKVKKVVLAYSGGLDTSAIIPWLKETYDDCEIIAFCADVGQ----------GAEELVGL 50
Query: 63 LMPKWKDSLGEDHILPL 79
E HI+ L
Sbjct: 51 EEKALASGASECHIVDL 67
>gi|78186906|ref|YP_374949.1| argininosuccinate synthase [Chlorobium luteolum DSM 273]
gi|119361302|sp|Q3B425|ASSY_PELLD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|78166808|gb|ABB23906.1| argininosuccinate synthase [Chlorobium luteolum DSM 273]
Length = 400
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE-LECRLCVRKKIVE 62
+++ A+ SGG D+S + W D++D + ++ + GQ+ ++E LE +
Sbjct: 1 MQREKIAIAY-SGGLDTSIMIKWLKDKYDADIVAVTGNLGQQKEIENLESKAIATGASGF 59
Query: 63 LMPKWKDSLGEDHI 76
K ED+I
Sbjct: 60 HFVDLKKPFVEDYI 73
>gi|254241058|ref|ZP_04934380.1| tRNA methyltransferase [Pseudomonas aeruginosa 2192]
gi|126194436|gb|EAZ58499.1| tRNA methyltransferase [Pseudomonas aeruginosa 2192]
Length = 375
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKI 60
+ + ++ SGG DSS L + +VE L +N E + C ++
Sbjct: 4 SAPTPRRERVIVGMSGGVDSSVSALLLLQQGYQVEGLFM----KNWDEDDGTEYCTARED 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFL 116
+ D +G L A ++ ++ + + PN P R I F
Sbjct: 60 LADAQAVCDRIGIK--LHTANFAAEYWDNVFEHFLAEYKAGRTPN---PDILCNREIKFK 114
Query: 117 VFAATLAYRLGITNIVIG 134
F A LG I G
Sbjct: 115 AF-LDYALMLGADLIATG 131
>gi|317127134|ref|YP_004093416.1| GMP synthase, large subunit [Bacillus cellulosilyticus DSM 2522]
gi|315472082|gb|ADU28685.1| GMP synthase, large subunit [Bacillus cellulosilyticus DSM 2522]
Length = 512
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 8 APSALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYG 43
L SGG DSS + D++ + D+G
Sbjct: 217 NKKVLCALSGGVDSSVVAALIHKAIGDQLICMFIDHG 253
>gi|197287052|ref|YP_002152924.1| argininosuccinate synthase [Proteus mirabilis HI4320]
gi|227354700|ref|ZP_03839119.1| argininosuccinate synthase [Proteus mirabilis ATCC 29906]
gi|194684539|emb|CAR46342.1| argininosuccinate synthase [Proteus mirabilis HI4320]
gi|227165210|gb|EEI50035.1| argininosuccinate synthase [Proteus mirabilis ATCC 29906]
Length = 403
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQ-RNKVELECRLCVRKKI 60
+ K +L +SGG D+S + W + +D E ++F D GQ R +E + +
Sbjct: 1 MTKGIKKIVLAYSGGLDTSAIIPWLKEHYDNCEVVAFVADVGQSREDLEGVEQKALASGA 60
Query: 61 VE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
E + ++ +D++ P+ G + S +M
Sbjct: 61 SECYVVDLREEFIKDYVYPVLKTGALYEGSYLLGTSMA 98
>gi|171912164|ref|ZP_02927634.1| Asparagine synthetase [Verrucomicrobium spinosum DSM 4136]
Length = 667
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 14 LFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
SGG DSS L+ A + V T + + EL+ V + I P ++
Sbjct: 270 YLSGGVDSSMILALACHLQGKNVHTYTVRVDHPDLDELDAASMVARYIGAPSPIVQNFRT 329
Query: 73 ED 74
ED
Sbjct: 330 ED 331
>gi|187251952|ref|YP_001876434.1| tRNA(Ile)-lysidine synthetase [Elusimicrobium minutum Pei191]
gi|186972112|gb|ACC99097.1| tRNA(Ile)-lysidine synthetase [Elusimicrobium minutum Pei191]
Length = 241
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 27/141 (19%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
D K+ L+ SGG DS L A + RV + + + K
Sbjct: 20 DFFKRGDKVLVGVSGGADSVCLLHFLTQLAQKKRFRVYACHIN----HSLREN-----AK 70
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
K K + LG + + + +I +L ++++ R F
Sbjct: 71 KDELFTKKLCEQLGVELFVITKDVKNI---ALKNKLSIEHAARK-------ARYSAFESA 120
Query: 119 AATLAYRLGITNIVIGVCETD 139
A ++ + + D
Sbjct: 121 ----AKKINAGYLALAHHLDD 137
>gi|15668605|ref|NP_247403.1| argininosuccinate synthase [Methanocaldococcus jannaschii DSM 2661]
gi|2492988|sp|Q60174|ASSY_METJA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|1591132|gb|AAB98414.1| argininosuccinate synthetase (argG) [Methanocaldococcus jannaschii
DSM 2661]
Length = 395
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 60/201 (29%), Gaps = 54/201 (26%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
A+L +SGG D+S CL D++ +V ++ D GQ +
Sbjct: 1 MERIAVLAYSGGLDTSCCLKLLEDKYGYKVVSVCVDVGQ----------PEEEIKEVEEK 50
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT---- 121
K + + + + + + + + P L A
Sbjct: 51 AKKLGVLKHYTIDAKE--EFVKDYIFRAIKANAMYEGYP-----------LSTALARPLI 97
Query: 122 ------LAYRLGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTP 171
+A +G + G C ET I + H+ + P
Sbjct: 98 AHKVVEIAEEVGAEAVAHG-----------CTGKGNDQF--RFETTIRI-KAPHLKIIAP 143
Query: 172 L--MWLKKYETWKLAQDIGGQ 190
+ + L + E + A++ G
Sbjct: 144 IRDLNLTRAEEIEYAKEKGIP 164
>gi|150391390|ref|YP_001321439.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alkaliphilus metalliredigens QYMF]
gi|205811141|sp|A6TUB2|MNMA_ALKMQ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|149951252|gb|ABR49780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alkaliphilus metalliredigens QYMF]
Length = 369
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETL 38
+KK P ++ SGG DSS ++ V +
Sbjct: 1 MKKDPKDTKVVIGMSGGVDSSVAALKLKEQGYDVIGI 37
>gi|325831243|ref|ZP_08164535.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Eggerthella sp. HGA1]
gi|325486844|gb|EGC89291.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Eggerthella sp. HGA1]
Length = 327
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + + ++ + ++G
Sbjct: 37 KKVLLALSGGVDSSVVAALLIKAIGKQLICVHVNHG 72
>gi|300855848|ref|YP_003780832.1| asparagine synthetase [Clostridium ljungdahlii DSM 13528]
gi|300435963|gb|ADK15730.1| asparagine synthetase [Clostridium ljungdahlii DSM 13528]
Length = 613
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 14 LFSGGQD----SSTCLSWALDRFDRVETLSFDY 42
L SGG D S+ + + + T S DY
Sbjct: 263 LLSGGLDSSVISTVAAAEFKKQGKTLNTYSIDY 295
>gi|190575182|ref|YP_001973027.1| argininosuccinate synthase [Stenotrophomonas maltophilia K279a]
gi|190013104|emb|CAQ46736.1| putative argininosuccinate synthase [Stenotrophomonas maltophilia
K279a]
Length = 398
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+L FSGG D+S C+ + +R V T+ D G V+ E R + K+ EL
Sbjct: 2 SNKDVVLAFSGGLDTSFCVPYLQERGYNVHTVFADTG---GVDDEERDFIEKRAAEL 55
>gi|251798335|ref|YP_003013066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paenibacillus sp. JDR-2]
gi|247545961|gb|ACT02980.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Paenibacillus sp. JDR-2]
Length = 377
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K+ ++ SGG DSS + V +
Sbjct: 5 KQETRVVVGMSGGVDSSVTALLLKQQGYDVVGI 37
>gi|149194636|ref|ZP_01871732.1| Thiamine biosynthesis protein:ExsB [Caminibacter mediatlanticus
TB-2]
gi|149135380|gb|EDM23860.1| Thiamine biosynthesis protein:ExsB [Caminibacter mediatlanticus
TB-2]
Length = 319
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + D+ VE L + G
Sbjct: 2 KALSLFSGGLDSLLAIKLIQDQGIEVEGLYINIG 35
>gi|88860122|ref|ZP_01134761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas tunicata D2]
gi|88818116|gb|EAR27932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas tunicata D2]
Length = 366
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D ++ SGG DSS + + +VE L
Sbjct: 1 MSD--NSNIKVIVGMSGGVDSSVSAYLLMQQGYQVEGL 36
>gi|326434852|gb|EGD80422.1| argininosuccinate synthetase 1 [Salpingoeca sp. ATCC 50818]
Length = 427
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVET 37
+ +L +SGG D+S L W +++ V
Sbjct: 14 NKTVVLAYSGGLDTSCILVWLIEQGYDVVA 43
>gi|326387235|ref|ZP_08208845.1| argininosuccinate synthase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208416|gb|EGD59223.1| argininosuccinate synthase [Novosphingobium nitrogenifigens DSM
19370]
Length = 404
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-VE 62
+ + +L +SGG D+S L W + V T + D GQ ELE + + ++
Sbjct: 1 MSEIKRVVLAYSGGLDTSVILKWLQVTYNCEVVTFTADLGQ--GEELEPARAKAELLGIK 58
Query: 63 LMPKWKDSLGEDHILP 78
+ D L E+ +
Sbjct: 59 PEHIYIDDLREEFVRD 74
>gi|295399520|ref|ZP_06809502.1| argininosuccinate synthase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978986|gb|EFG54582.1| argininosuccinate synthase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 402
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
P +L +SGG D+S + W +R V D G
Sbjct: 3 NPKIVLAYSGGLDTSVAIKWLQERGYDVIACCLDLG 38
>gi|312109922|ref|YP_003988238.1| argininosuccinate synthase [Geobacillus sp. Y4.1MC1]
gi|311215023|gb|ADP73627.1| argininosuccinate synthase [Geobacillus sp. Y4.1MC1]
Length = 402
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
P +L +SGG D+S + W +R V D G
Sbjct: 3 NPKIVLAYSGGLDTSVAIKWLQERGYDVIACCLDLG 38
>gi|212638331|ref|YP_002314851.1| argininosuccinate synthase [Anoxybacillus flavithermus WK1]
gi|226729219|sp|B7GGR4|ASSY_ANOFW RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|212559811|gb|ACJ32866.1| Argininosuccinate synthase [Anoxybacillus flavithermus WK1]
Length = 402
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
P +L +SGG D+S + W ++ V D G
Sbjct: 3 NPKVVLAYSGGLDTSVAIKWLQEQGYDVVACCLDVG 38
>gi|167854995|ref|ZP_02477769.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus parasuis 29755]
gi|219870378|ref|YP_002474753.1| tRNA-specific 2-thiouridylase MnmA [Haemophilus parasuis SH0165]
gi|167853843|gb|EDS25083.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus parasuis 29755]
gi|219690582|gb|ACL31805.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus parasuis SH0165]
Length = 383
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DSS + +VE L
Sbjct: 23 KKKVICGMSGGVDSSVSAFILQQQGYQVEGL 53
>gi|325294037|ref|YP_004279901.1| Argininosuccinate synthase [Agrobacterium sp. H13-3]
gi|325061890|gb|ADY65581.1| Argininosuccinate synthase [Agrobacterium sp. H13-3]
Length = 446
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 44 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAELLGIKEIF 103
>gi|294340794|emb|CAZ89189.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
[Thiomonas sp. 3As]
Length = 446
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
FSGG D+S L W + + + + GQ
Sbjct: 18 FSGGLDTSAALLWMKKKGAQPYAYTANLGQ 47
>gi|291616365|ref|YP_003519107.1| TilS [Pantoea ananatis LMG 20103]
gi|291151395|gb|ADD75979.1| TilS [Pantoea ananatis LMG 20103]
Length = 435
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 1 MND---IIKKAPSALLLFSGGQDSSTCLSWALD 30
M+D ++K+ + ++ FSGG DS+ L
Sbjct: 1 MSDFDALLKENDALVVAFSGGLDSTVLLHQLRA 33
>gi|264677785|ref|YP_003277691.1| NAD+ synthetase [Comamonas testosteroni CNB-2]
gi|262208297|gb|ACY32395.1| NAD+ synthetase [Comamonas testosteroni CNB-2]
Length = 535
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 9 PSALLLFSGGQDSSTCLSWALD 30
P AL+ SGG DS+ L+ A+D
Sbjct: 273 PGALIGLSGGMDSALVLAIAVD 294
>gi|290581402|ref|YP_003485794.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Streptococcus mutans NN2025]
gi|254998301|dbj|BAH88902.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Streptococcus mutans NN2025]
Length = 373
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|196233908|ref|ZP_03132746.1| asparagine synthase (glutamine-hydrolyzing) [Chthoniobacter flavus
Ellin428]
gi|196222102|gb|EDY16634.1| asparagine synthase (glutamine-hydrolyzing) [Chthoniobacter flavus
Ellin428]
Length = 661
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 21/119 (17%)
Query: 13 LLFSGGQDSSTCLSWALDR----FDRVETLSFD----------------YGQRNKVELEC 52
+ SGG DSS + A + F+ G R+ E+
Sbjct: 280 VFLSGGIDSSAVAALAAKHVPAGQLNTFAIGFNEPSFDESAHARFVAERLGTRHHEEILD 339
Query: 53 RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
+ E++ K + LG+ +LP +L + +T + D + P R
Sbjct: 340 LDKSVSLLPEIVAKLDEPLGDGSLLPTYLLSRFTRQHVTVALGGDGGDELFAG-YDPFR 397
>gi|150401052|ref|YP_001324818.1| argininosuccinate synthase [Methanococcus aeolicus Nankai-3]
gi|150013755|gb|ABR56206.1| Argininosuccinate synthase [Methanococcus aeolicus Nankai-3]
Length = 401
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 61/192 (31%), Gaps = 34/192 (17%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K A+L +SGG D+S CL + + +V T D GQ E E V K
Sbjct: 5 NKEKIAVLAYSGGLDTSCCLKLLEENYNYKVVTACVDVGQ---PEEEITKPVEKA----- 56
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
+ + + + + + + + + P + R +I L LA
Sbjct: 57 --KEYGVFAHYTIDAKE--EFAKEYIFRAIKANAIYEGYPLSTALARPLIGLKL-VELAK 111
Query: 125 RLGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPL--MWLKKY 178
L I G C E+ I V + P+ + L +
Sbjct: 112 ELNAEAISHG-----------CTGKGNDQF--RFES-IMRAKAPEVKIIAPIRDLNLTRS 157
Query: 179 ETWKLAQDIGGQ 190
E + A+ G
Sbjct: 158 EEIEYAKKHGIP 169
>gi|145631293|ref|ZP_01787065.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus influenzae R3021]
gi|144983078|gb|EDJ90578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Haemophilus influenzae R3021]
Length = 362
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + SGG DSS + +VE L
Sbjct: 2 RQKKVICGMSGGVDSSVSAFILQQQGYQVEGL 33
>gi|323350805|ref|ZP_08086464.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis VMC66]
gi|322122979|gb|EFX94682.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis VMC66]
gi|332365071|gb|EGJ42836.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sanguinis SK355]
Length = 373
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M+D K ++ SGG DSS ++ V +
Sbjct: 1 MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|289762363|ref|ZP_06521741.1| asparagine synthetase asnB [Mycobacterium tuberculosis GM 1503]
gi|289709869|gb|EFD73885.1| asparagine synthetase asnB [Mycobacterium tuberculosis GM 1503]
Length = 544
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 230 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 277
>gi|289750795|ref|ZP_06510173.1| asparagine synthetase asnB [Mycobacterium tuberculosis T92]
gi|289691382|gb|EFD58811.1| asparagine synthetase asnB [Mycobacterium tuberculosis T92]
Length = 598
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 284 LSGGIDSTAIAALAIRHNPRLITFTTGFEREGFSEIDVAVASAEAIGA 331
>gi|258424455|ref|ZP_05687334.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus A9635]
gi|257845324|gb|EEV69359.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus A9635]
Length = 431
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASNEEARFLEAYCDRHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLN 85
>gi|212634876|ref|YP_002311401.1| argininosuccinate synthase [Shewanella piezotolerans WP3]
gi|226729207|sp|B8CNI0|ASSY_SHEPW RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|212556360|gb|ACJ28814.1| Argininosuccinate synthase [Shewanella piezotolerans WP3]
Length = 409
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELEC--RL 54
M+ KK +L +SGG D+S + W + +D E ++F D GQ ELE
Sbjct: 1 MSAETKKTDVKKVVLAYSGGLDTSAIIPWLKETYDNCEIVAFCADVGQ-GSEELEGLHEK 59
Query: 55 CVRKKIVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
+ E + K+ L D+I P G I + +M
Sbjct: 60 AIASGASECYIVDLKEELVADYIYPTIATGAIYEGTYLLGTSMA 103
>gi|149186188|ref|ZP_01864502.1| sulfate adenylyltransferase subunit 2 [Erythrobacter sp. SD-21]
gi|148830219|gb|EDL48656.1| sulfate adenylyltransferase subunit 2 [Erythrobacter sp. SD-21]
Length = 302
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD 33
M +++ +A ++L+S G+DS+ L A F
Sbjct: 17 MREVVSEAEKPVMLYSIGKDSAVMLHLAKKAFY 49
>gi|300310760|ref|YP_003774852.1| argininosuccinate synthase [Herbaspirillum seropedicae SmR1]
gi|124483516|emb|CAM32631.1| Argininosuccinate synthase protein [Herbaspirillum seropedicae]
gi|300073545|gb|ADJ62944.1| argininosuccinate synthase protein [Herbaspirillum seropedicae
SmR1]
Length = 444
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 1 MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
M++I++ + FSGG D+S L+W + + + GQ
Sbjct: 1 MSNILQSVPVNQKVGIAFSGGLDTSAALTWMRQKGAIPYAYTANLGQ 47
>gi|23465627|ref|NP_696230.1| argininosuccinate synthase [Bifidobacterium longum NCC2705]
gi|30172866|sp|Q8G5F2|ASSY_BIFLO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|23326299|gb|AAN24866.1| argininosuccinate synthase [Bifidobacterium longum NCC2705]
Length = 412
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
+ +L +SGG D+S +S+ +R V +S D GQ
Sbjct: 1 MADNKRIVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQ 41
>gi|103485988|ref|YP_615549.1| argininosuccinate synthase [Sphingopyxis alaskensis RB2256]
gi|119361325|sp|Q1GVV6|ASSY_SPHAL RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|98976065|gb|ABF52216.1| argininosuccinate synthase [Sphingopyxis alaskensis RB2256]
Length = 405
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
M+D IK +L +SGG D+S L W V T + D GQ ++E R
Sbjct: 1 MSDSIK---RVVLAYSGGLDTSVILKWLQVTYGCEVVTFTADLGQGEELE-PARAKAELM 56
Query: 60 IVELMPKWKDSLGEDHILP 78
++ + D L E+ +
Sbjct: 57 GIKPEHIYIDDLREEFVRD 75
>gi|292654226|ref|YP_003534123.1| argininosuccinate synthase [Haloferax volcanii DS2]
gi|291371754|gb|ADE03981.1| argininosuccinate synthase [Haloferax volcanii DS2]
Length = 405
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQ 44
L FSGG D++ C+ + +D V ++ D GQ
Sbjct: 2 KKVALAFSGGLDTTVCVPILEEEYGYDEVVGVTVDVGQ 39
>gi|237716742|ref|ZP_04547223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. D1]
gi|229442725|gb|EEO48516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Bacteroides sp. D1]
Length = 368
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVE-LECRLCVRKKI 60
SGG DSS L+ V ++F Y E LE + +++
Sbjct: 1 MSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERL 48
>gi|228923378|ref|ZP_04086666.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836332|gb|EEM81685.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 411
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 6 KKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
K ++L +SGG D+S + W ++ + L D G
Sbjct: 10 KMEKKKVVLAYSGGLDTSVAIKWLQEKDYDIIALCLDLG 48
>gi|254492565|ref|ZP_05105737.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylophaga thiooxidans DMS010]
gi|224462457|gb|EEF78734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methylophaga thiooxydans DMS010]
Length = 367
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + ++VE L
Sbjct: 1 MAENKKVVVGLSGGVDSSVAALLLNQQHEQVEGL 34
>gi|213692741|ref|YP_002323327.1| Argininosuccinate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|254807508|sp|B7GTP0|ASSY_BIFLI RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|213524202|gb|ACJ52949.1| Argininosuccinate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458899|dbj|BAJ69520.1| argininosuccinate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 412
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
+ +L +SGG D+S +S+ +R V +S D GQ
Sbjct: 1 MADNKRIVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQ 41
>gi|254458620|ref|ZP_05072045.1| NAD+ synthetase [Campylobacterales bacterium GD 1]
gi|207084928|gb|EDZ62215.1| NAD+ synthetase [Campylobacterales bacterium GD 1]
Length = 268
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDR 34
++ SGG DS+ A F
Sbjct: 25 KRVVVGLSGGLDSAVVAVIAHKTFKD 50
>gi|161528038|ref|YP_001581864.1| ATP binding protein [Nitrosopumilus maritimus SCM1]
gi|160339339|gb|ABX12426.1| putative ATP binding protein [Nitrosopumilus maritimus SCM1]
Length = 229
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETL 38
LFSGG+DS+ + A ++ L
Sbjct: 6 LFSGGKDSTYAIYLAKKHGHEIKCL 30
>gi|194366501|ref|YP_002029111.1| argininosuccinate synthase [Stenotrophomonas maltophilia R551-3]
gi|194349305|gb|ACF52428.1| Argininosuccinate synthase [Stenotrophomonas maltophilia R551-3]
Length = 397
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+L FSGG D+S C+ + +R V T+ D G V+ E R + K+ EL
Sbjct: 2 SNKDVVLAFSGGLDTSFCVPYLQERGYNVHTVFADTG---GVDDEERDFIEKRAAEL 55
>gi|323477572|gb|ADX82810.1| Argininosuccinate synthase [Sulfolobus islandicus HVE10/4]
Length = 406
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNK-VELECRLCVR 57
+L +SGG D++ + W + F V T++ D GQ++ ++E R +
Sbjct: 17 KIVLAYSGGLDTTVSIRWLKETFKAEVITVTVDVGQKDDFKKIEERAYIA 66
>gi|315122406|ref|YP_004062895.1| NAD synthetase [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495808|gb|ADR52407.1| NAD synthetase [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 561
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 10/106 (9%)
Query: 1 MNDIIKKA--PSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRL 54
+ D +KK ++ SGG DS+ C + A+ + L + Y +E +
Sbjct: 283 LRDYVKKNNFHKVIIGLSGGIDSALCATIAVDALGKENVQTIMLPYKYTSNESLE-DAAA 341
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD 100
C + L + +I+ + VA IQ
Sbjct: 342 CAKSLDCRYDVLPIHDLVDH---FFSIMSQFLQEEPSGIVAENIQS 384
>gi|227827764|ref|YP_002829544.1| argininosuccinate synthase [Sulfolobus islandicus M.14.25]
gi|229585035|ref|YP_002843537.1| argininosuccinate synthase [Sulfolobus islandicus M.16.27]
gi|238619936|ref|YP_002914762.1| argininosuccinate synthase [Sulfolobus islandicus M.16.4]
gi|227459560|gb|ACP38246.1| Argininosuccinate synthase [Sulfolobus islandicus M.14.25]
gi|228020085|gb|ACP55492.1| Argininosuccinate synthase [Sulfolobus islandicus M.16.27]
gi|238381006|gb|ACR42094.1| Argininosuccinate synthase [Sulfolobus islandicus M.16.4]
Length = 406
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNK-VELECRLCVR 57
+L +SGG D++ + W + F V T++ D GQ++ ++E R +
Sbjct: 17 KIVLAYSGGLDTTVSIRWLKETFKAEVITVTVDVGQKDDFKKIEERAYIA 66
>gi|227546226|ref|ZP_03976275.1| argininosuccinate synthase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|296453804|ref|YP_003660947.1| argininosuccinate synthase [Bifidobacterium longum subsp. longum
JDM301]
gi|322690756|ref|YP_004220326.1| argininosuccinate synthase [Bifidobacterium longum subsp. longum
JCM 1217]
gi|227213207|gb|EEI81079.1| argininosuccinate synthase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|296183235|gb|ADH00117.1| Argininosuccinate synthase [Bifidobacterium longum subsp. longum
JDM301]
gi|320455612|dbj|BAJ66234.1| argininosuccinate synthase [Bifidobacterium longum subsp. longum
JCM 1217]
Length = 412
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
+ +L +SGG D+S +S+ +R V +S D GQ
Sbjct: 1 MADNKRIVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQ 41
>gi|218891213|ref|YP_002440079.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas aeruginosa LESB58]
gi|226704774|sp|B7UV15|MNMA_PSEA8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|218771438|emb|CAW27205.1| tRNA methyltransferase [Pseudomonas aeruginosa LESB58]
Length = 375
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKI 60
+ + ++ SGG DSS L + +VE L +N E + C ++
Sbjct: 4 SAPTPRRERVIVGMSGGVDSSVSALLLLQQGYQVEGLFM----KNWDEDDGTEYCTARED 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFL 116
+ D +G L A ++ ++ + + PN P R I F
Sbjct: 60 LADAQAVCDRIGIK--LHTANFAAEYWDNVFEHFLAEYKAGRTPN---PDILCNREIKFK 114
Query: 117 VFAATLAYRLGITNIVIG 134
F A LG I G
Sbjct: 115 AF-LDYALMLGADLIATG 131
>gi|227830474|ref|YP_002832254.1| argininosuccinate synthase [Sulfolobus islandicus L.S.2.15]
gi|229579286|ref|YP_002837684.1| argininosuccinate synthase [Sulfolobus islandicus Y.G.57.14]
gi|229581953|ref|YP_002840352.1| argininosuccinate synthase [Sulfolobus islandicus Y.N.15.51]
gi|284997968|ref|YP_003419735.1| Argininosuccinate synthase [Sulfolobus islandicus L.D.8.5]
gi|227456922|gb|ACP35609.1| Argininosuccinate synthase [Sulfolobus islandicus L.S.2.15]
gi|228010000|gb|ACP45762.1| Argininosuccinate synthase [Sulfolobus islandicus Y.G.57.14]
gi|228012669|gb|ACP48430.1| Argininosuccinate synthase [Sulfolobus islandicus Y.N.15.51]
gi|284445863|gb|ADB87365.1| Argininosuccinate synthase [Sulfolobus islandicus L.D.8.5]
gi|323474832|gb|ADX85438.1| Argininosuccinate synthase [Sulfolobus islandicus REY15A]
Length = 406
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNK-VELECRLCVR 57
+L +SGG D++ + W + F V T++ D GQ++ ++E R +
Sbjct: 17 KIVLAYSGGLDTTVSIRWLKETFKAEVITVTVDVGQKDDFKKIEERAYIA 66
>gi|24380473|ref|NP_722428.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus mutans UA159]
gi|30173426|sp|Q8DRS4|MNMA_STRMU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|24378503|gb|AAN59734.1|AE015035_3 putative tRNA [Streptococcus mutans UA159]
Length = 373
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|61216557|sp|Q72C25|TILS_DESVH RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
Length = 347
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 7 KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ ++ SGG DS+ L + L D+G R + E R V
Sbjct: 18 RNCHCVVALSGGADSTALLLILHYLRQRLGLSLSALHVDHGLRPESAAEARAAV 71
>gi|148255024|ref|YP_001239609.1| GMP synthase [Bradyrhizobium sp. BTAi1]
gi|146407197|gb|ABQ35703.1| GMP synthase (glutamine-hydrolyzing) [Bradyrhizobium sp. BTAi1]
Length = 534
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 31/191 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + D++ + D+G RL + +V+L
Sbjct: 238 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHG-------LLRLNEAETVVDLFRHHY 290
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-G 127
+ LG+++ + + I GR +F+ A ++ G
Sbjct: 291 NIPLVHVDASKLFLGELAGVTDPEQKRKTI-----------GR--LFIDVFEAEAKKIGG 337
Query: 128 ITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ G D ++G P TI++ L ++ + PL L K E
Sbjct: 338 ADFLAQGTLYPDVIESVSFTGGP---SVTIKSHHNVGGLPARMNMKLVEPLRELFKDEVR 394
Query: 182 KLAQDIGGQDL 192
L +++G D+
Sbjct: 395 VLGRELGLPDV 405
>gi|46191095|ref|ZP_00120525.2| COG0137: Argininosuccinate synthase [Bifidobacterium longum
DJO10A]
gi|189439673|ref|YP_001954754.1| argininosuccinate synthase [Bifidobacterium longum DJO10A]
gi|239622229|ref|ZP_04665260.1| argininosuccinate synthase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|312133074|ref|YP_004000413.1| argg [Bifidobacterium longum subsp. longum BBMN68]
gi|317481820|ref|ZP_07940848.1| arginosuccinate synthase [Bifidobacterium sp. 12_1_47BFAA]
gi|322688764|ref|YP_004208498.1| argininosuccinate synthase [Bifidobacterium longum subsp.
infantis 157F]
gi|229889862|sp|B3DSY7|ASSY_BIFLD RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|189428108|gb|ACD98256.1| Argininosuccinate synthase [Bifidobacterium longum DJO10A]
gi|239514226|gb|EEQ54093.1| argininosuccinate synthase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|291517163|emb|CBK70779.1| argininosuccinate synthase [Bifidobacterium longum subsp. longum
F8]
gi|311774067|gb|ADQ03555.1| ArgG [Bifidobacterium longum subsp. longum BBMN68]
gi|316916757|gb|EFV38151.1| arginosuccinate synthase [Bifidobacterium sp. 12_1_47BFAA]
gi|320460100|dbj|BAJ70720.1| argininosuccinate synthase [Bifidobacterium longum subsp.
infantis 157F]
Length = 412
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
+ +L +SGG D+S +S+ +R V +S D GQ
Sbjct: 1 MADNKRIVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQ 41
>gi|315640033|ref|ZP_07895158.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus italicus DSM 15952]
gi|315484161|gb|EFU74632.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus italicus DSM 15952]
Length = 378
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 9 NSNTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 41
>gi|305680759|ref|ZP_07403566.1| asparagine synthase (glutamine-hydrolyzing) [Corynebacterium
matruchotii ATCC 14266]
gi|305658964|gb|EFM48464.1| asparagine synthase (glutamine-hydrolyzing) [Corynebacterium
matruchotii ATCC 14266]
Length = 640
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 1 MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ D ++K A + SGG DS+ + A + T + + + E++
Sbjct: 254 LEDSVEKHMRADVTVGSFLSGGIDSTAIAALAKRHNPNLLTFTTGFEREGYSEVDVAAES 313
Query: 57 RKKI 60
K I
Sbjct: 314 AKAI 317
>gi|227832922|ref|YP_002834629.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Corynebacterium aurimucosum ATCC 700975]
gi|262182589|ref|ZP_06042010.1| tRNA-specific 2-thiouridylase MnmA [Corynebacterium aurimucosum
ATCC 700975]
gi|254811450|sp|C3PFT7|MNMA_CORA7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|227453938|gb|ACP32691.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Corynebacterium aurimucosum ATCC 700975]
Length = 361
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS + A++ V +
Sbjct: 2 RVLVAMSGGVDSSVAAARAVEAGHDVIGVH 31
>gi|225021883|ref|ZP_03711075.1| hypothetical protein CORMATOL_01915 [Corynebacterium matruchotii
ATCC 33806]
gi|224945340|gb|EEG26549.1| hypothetical protein CORMATOL_01915 [Corynebacterium matruchotii
ATCC 33806]
Length = 634
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 1 MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ D ++K A + SGG DS+ + A + T + + + E++
Sbjct: 248 LEDSVEKHMRADVTVGSFLSGGIDSTAIAALAKRHNPNLLTFTTGFEREGYSEVDVAAES 307
Query: 57 RKKI 60
K I
Sbjct: 308 AKAI 311
>gi|148973963|ref|ZP_01811496.1| NAD synthetase [Vibrionales bacterium SWAT-3]
gi|145965660|gb|EDK30908.1| NAD synthetase [Vibrionales bacterium SWAT-3]
Length = 276
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 61/205 (29%), Gaps = 36/205 (17%)
Query: 2 NDIIKKAPSALLL-FSGGQDSSTCLSWAL-----------DRFDRVETLSFDYG-QRNKV 48
+ + +L+L SGG DS+TC A + + YG Q+++
Sbjct: 30 TKLQQSGCKSLILGISGGVDSTTCGRLAQLAVDSLNESTGSNDYQFIAVRLPYGEQKDED 89
Query: 49 ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
E + L + + K + H L T + + N+
Sbjct: 90 EAQLALSFIQPSQSVSVNIKAGVDGLHAASHVALEGTGLL-PTDSAKIDFVKGNVK---- 144
Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
R A +A + V TD+S + I
Sbjct: 145 -AR-------ARMIAQYEIAGYVGGLVIGTDHSA------ENITGF----YTKHGDGACD 186
Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + +LA +G + +
Sbjct: 187 LAPLFGLNKRQVRELAATLGAPERL 211
>gi|189347539|ref|YP_001944068.1| tRNA-specific 2-thiouridylase MnmA [Chlorobium limicola DSM 245]
gi|189341686|gb|ACD91089.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobium limicola DSM 245]
Length = 358
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+K + + + SGG DS+ + RV ++
Sbjct: 1 MKSSQAVVTGISGGVDSAVAACLLHRQGYRVTGINIR 37
>gi|328957156|ref|YP_004374542.1| tRNA sulfurtransferase [Carnobacterium sp. 17-4]
gi|328673480|gb|AEB29526.1| tRNA sulfurtransferase [Carnobacterium sp. 17-4]
Length = 405
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 25/191 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+L+ SGG DS + R VE + F + ++K
Sbjct: 179 KGMLMLSGGIDSPVAGYLTMKRGVNVEAVHF-----HSPPYTSPRALQKAKDLAAKLAAF 233
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
S I ++ + + + + + + L R ++ + R G+
Sbjct: 234 SGSVQFI-------EVPFTEIQEEIKKIVPEGYLMTVT---RRMMMRLTDLIREERKGL- 282
Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
IV G + + + + I + + V P++ + K E ++AQ I
Sbjct: 283 AIVNGESLGQVAS---------QTLHSMIAINDVTATPVIRPVVSMDKNEIIEIAQKIDT 333
Query: 190 QDLVNLILEES 200
+L E+
Sbjct: 334 FELSIQPFEDC 344
>gi|322515062|ref|ZP_08068070.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus ureae ATCC 25976]
gi|322118942|gb|EFX91119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus ureae ATCC 25976]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|307256183|ref|ZP_07537970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306865364|gb|EFM97260.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|307244970|ref|ZP_07527067.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307253923|ref|ZP_07535775.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307258377|ref|ZP_07540118.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306854135|gb|EFM86343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306863127|gb|EFM95069.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306867561|gb|EFM99408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|303251982|ref|ZP_07338153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307247144|ref|ZP_07529196.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|302649412|gb|EFL79597.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306856393|gb|EFM88544.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|303235677|ref|ZP_07322284.1| tRNA(Ile)-lysidine synthetase [Prevotella disiens FB035-09AN]
gi|302484124|gb|EFL47112.1| tRNA(Ile)-lysidine synthetase [Prevotella disiens FB035-09AN]
Length = 461
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
++ SGG DS L +E ++ R + E KK+ E + +
Sbjct: 22 IVGLSGGADSVALLLVLKHLGYNIEAAHCNFNLRGE-ESNRDEEYCKKLCEKLNVPFHLI 80
Query: 72 GEDHIL 77
D IL
Sbjct: 81 HFDTIL 86
>gi|298373197|ref|ZP_06983187.1| tRNA(Ile)-lysidine synthase [Bacteroidetes oral taxon 274 str.
F0058]
gi|298276101|gb|EFI17652.1| tRNA(Ile)-lysidine synthase [Bacteroidetes oral taxon 274 str.
F0058]
Length = 445
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV----ELECRLCVR 57
N+++ L+ SGG DS L + R ++ R E R +
Sbjct: 14 NNLLSDNRKLLVAVSGGIDSVVLLDMLVRCGYRCAVAHCNFHLRGNESDNDEQFVRALAQ 73
Query: 58 KKIVELMPKWKDSLGEDHILPLAI 81
K + L + D++ ++I
Sbjct: 74 KYDIPLFVRQFDTIQTAKNDNISI 97
>gi|258646844|ref|ZP_05734313.1| argininosuccinate synthase [Dialister invisus DSM 15470]
gi|260404282|gb|EEW97829.1| argininosuccinate synthase [Dialister invisus DSM 15470]
Length = 414
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQR------NKVELECRLCVR 57
+ + +L +SGG D+S + W + + V + + GQ ++ L+ V
Sbjct: 1 MNEIKKVVLAYSGGLDTSVIIPWLKENYNCEVIACTINLGQPEDFDAIHEKALKSGASVA 60
Query: 58 K 58
+
Sbjct: 61 E 61
>gi|256750917|ref|ZP_05491801.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
ethanolicus CCSD1]
gi|256750252|gb|EEU63272.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
ethanolicus CCSD1]
Length = 613
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 14 LFSGGQDSSTCLSWA----LDRFDRVETLSFDY 42
L SGG DS+ +A + ++ T S DY
Sbjct: 263 LLSGGLDSTAVSFFANEELKQKGHKLITYSVDY 295
>gi|255994274|ref|ZP_05427409.1| GMP synthase domain protein [Eubacterium saphenum ATCC 49989]
gi|255993942|gb|EEU04031.1| GMP synthase domain protein [Eubacterium saphenum ATCC 49989]
Length = 326
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
+ LL SGG DSS + + D++ + ++G K E E + V K
Sbjct: 36 SDRVLLALSGGVDSSVVAALLIKAVGDQLIGVHVNHGLMRKGESEQVISVFK 87
>gi|240948512|ref|ZP_04752885.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus minor NM305]
gi|240297020|gb|EER47591.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus minor NM305]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|237784943|ref|YP_002905648.1| GMP synthase [Corynebacterium kroppenstedtii DSM 44385]
gi|237757855|gb|ACR17105.1| GMP synthase [Corynebacterium kroppenstedtii DSM 44385]
Length = 524
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE 51
+ + A+ SGG DS+ + DR+ + D+G K E E
Sbjct: 213 VRQQVGPEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRKGERE 264
>gi|225869459|ref|YP_002745407.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus equi subsp. zooepidemicus]
gi|259495839|sp|C0MGQ2|MNMA_STRS7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|225702735|emb|CAX00880.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus equi subsp. zooepidemicus]
Length = 374
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 2 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 37
>gi|223041989|ref|ZP_03612173.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus minor 202]
gi|223017246|gb|EEF15674.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus minor 202]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|254478610|ref|ZP_05091983.1| asparagine synthase [Carboxydibrachium pacificum DSM 12653]
gi|214035464|gb|EEB76165.1| asparagine synthase [Carboxydibrachium pacificum DSM 12653]
Length = 643
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 14 LFSGGQDSSTCLSWA----LDRFDRVETLSFDY 42
L SGG DS+ +A + ++ T S DY
Sbjct: 293 LLSGGLDSTAVSFFANEELKQKGHKLITYSVDY 325
>gi|190149429|ref|YP_001967954.1| tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|303249862|ref|ZP_07336066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307249368|ref|ZP_07531361.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|307251687|ref|ZP_07533592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307260616|ref|ZP_07542308.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|307262747|ref|ZP_07544374.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|189914560|gb|ACE60812.1| putative tRNA (5-methylaminomethyl-2-
thiouridylate)-methyltransferase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302651429|gb|EFL81581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306858590|gb|EFM90653.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306860884|gb|EFM92892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306869693|gb|EFN01478.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306871892|gb|EFN03609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|165975614|ref|YP_001651207.1| tRNA-specific 2-thiouridylase MnmA [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|205811090|sp|B0BS63|MNMA_ACTPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|165875715|gb|ABY68763.1| tRNA(5-methylaminomethyl-2-thiouridylate)methyltransferase
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|149926802|ref|ZP_01915061.1| transcriptional regulator, GntR family protein [Limnobacter sp.
MED105]
gi|149824354|gb|EDM83572.1| transcriptional regulator, GntR family protein [Limnobacter sp.
MED105]
Length = 330
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 6/47 (12%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
++ +SGG DS+ L + + + ++++ +
Sbjct: 23 VVAYSGGVDSTVLLHALHVMGLPLHAVHVN----HQIQTQADAWEAH 65
>gi|126207646|ref|YP_001052871.1| tRNA-specific 2-thiouridylase MnmA [Actinobacillus
pleuropneumoniae L20]
gi|205811077|sp|A3MYN0|MNMA_ACTP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|126096438|gb|ABN73266.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Actinobacillus pleuropneumoniae serovar 5b str. L20]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|167039122|ref|YP_001662107.1| asparagine synthase [Thermoanaerobacter sp. X514]
gi|300913288|ref|ZP_07130605.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter sp.
X561]
gi|307723698|ref|YP_003903449.1| asparagine synthase [Thermoanaerobacter sp. X513]
gi|166853362|gb|ABY91771.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter sp.
X514]
gi|300889973|gb|EFK85118.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter sp.
X561]
gi|307580759|gb|ADN54158.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter sp.
X513]
Length = 613
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 14 LFSGGQDSSTCLSWA----LDRFDRVETLSFDY 42
L SGG DS+ +A + ++ T S DY
Sbjct: 263 LLSGGLDSTAVSFFANEELKQKGHKLITYSVDY 295
>gi|20807299|ref|NP_622470.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
tengcongensis MB4]
gi|20515810|gb|AAM24074.1| Asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
tengcongensis MB4]
Length = 613
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 14 LFSGGQDSSTCLSWA----LDRFDRVETLSFDY 42
L SGG DS+ +A + ++ T S DY
Sbjct: 263 LLSGGLDSTAVSFFANEELKQKGHKLITYSVDY 295
>gi|84496772|ref|ZP_00995626.1| argininosuccinate synthase [Janibacter sp. HTCC2649]
gi|84383540|gb|EAP99421.1| argininosuccinate synthase [Janibacter sp. HTCC2649]
Length = 475
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S ++W ++ T + D GQ ++ E++ V + E + +
Sbjct: 18 FSGGLDTSVAVAWMREKGAVPCTYTADLGQYDEPEID---TVPTRAGEYGAEIARLVDCR 74
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLP 104
L L I+ + K N P
Sbjct: 75 SALVEEGLSAIACGAFHIRSGGKTYFNTTP 104
>gi|53728867|ref|ZP_00134691.2| COG0482: Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 389
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 29 KKKVIIGMSGGVDSSVSAFILQQQGYQVEGL 59
>gi|15597822|ref|NP_251316.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas aeruginosa PAO1]
gi|107102147|ref|ZP_01366065.1| hypothetical protein PaerPA_01003197 [Pseudomonas aeruginosa PACS2]
gi|116050613|ref|YP_790568.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas aeruginosa
UCBPP-PA14]
gi|14195276|sp|Q9I0L2|MNMA_PSEAE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|122259736|sp|Q02NB8|MNMA_PSEAB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|9948693|gb|AAG06014.1|AE004691_5 tRNA methyltransferase [Pseudomonas aeruginosa PAO1]
gi|115585834|gb|ABJ11849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas aeruginosa UCBPP-PA14]
Length = 375
Score = 36.4 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKI 60
+ + ++ SGG DSS L + +VE L +N E + C ++
Sbjct: 4 SAPTPRRERVIVGMSGGVDSSVSALLLLQQGYQVEGLFM----KNWDEDDGTEYCTARED 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFL 116
+ D +G L A ++ ++ + + PN P R I F
Sbjct: 60 LADAQAVCDRIGIK--LHTANFAAEYWDNVFEHFLAEYKAGRTPN---PDILCNREIKFK 114
Query: 117 VFAATLAYRLGITNIVIG 134
F A LG I G
Sbjct: 115 AF-LDYALMLGADLIATG 131
>gi|299532629|ref|ZP_07046017.1| PP-loop [Comamonas testosteroni S44]
gi|298719264|gb|EFI60233.1| PP-loop [Comamonas testosteroni S44]
Length = 331
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 45/151 (29%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++I++ ++ SGG+DS T L L+ R V+ IV
Sbjct: 65 NMIEEGDKVMVCMSGGKDSYTLLDILRK-------------------LQKRAPVKFDIVA 105
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT---FVP---------- 109
+ K +H+LP + V I++ + + VP
Sbjct: 106 VNLDQKQPGFPEHVLPEYF--------QSIGVDYHIENQDTYSVVKRVVPEGKTTCGLCS 157
Query: 110 -GRNIIFLVFAATLAYRLGITNIVIGVCETD 139
R I A +LG T + +G D
Sbjct: 158 RLRRAILYKV----ADQLGCTKVALGHHRDD 184
>gi|289193014|ref|YP_003458955.1| ATP binding protein [Methanocaldococcus sp. FS406-22]
gi|288939464|gb|ADC70219.1| ATP binding protein [Methanocaldococcus sp. FS406-22]
Length = 223
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRV 35
+L+SGG+DS+ L WAL V
Sbjct: 5 VLYSGGKDSNYALYWALKEGFDV 27
>gi|256372604|ref|YP_003110428.1| hypothetical protein Afer_1841 [Acidimicrobium ferrooxidans DSM
10331]
gi|256009188|gb|ACU54755.1| conserved hypothetical protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 265
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 58/197 (29%), Gaps = 60/197 (30%)
Query: 13 LLFSGGQDSSTCLSWA--LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
+L SGG DS L+ A D+ ++ G+ + + R + + ++E
Sbjct: 2 VLLSGGVDSGV-LAVAGTRAIGDQAVAVT---GRSASLAADERDAIARLVLE-------- 49
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN---------IIFLVFAAT 121
G H+ + + P +V RN A
Sbjct: 50 NGICHV------------------EVATHEGEDPA-YV--RNDRMRCYVCKTHLFRAAGP 88
Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL--KKYE 179
+A +V G D D R + A V P + L K
Sbjct: 89 VAEERRA-VMVTGAHVDDLG---DWRPGMLAA----------EEAGVRAPFLELGVNKAS 134
Query: 180 TWKLAQDIGGQDLVNLI 196
LA+++G L +
Sbjct: 135 IRSLARELGVDWLADKP 151
>gi|256810563|ref|YP_003127932.1| subunit of tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase contains the PP-loop ATPase domain
protein-like protein [Methanocaldococcus fervens AG86]
gi|256793763|gb|ACV24432.1| subunit of tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase contains the PP-loop ATPase domain
protein-like protein [Methanocaldococcus fervens AG86]
Length = 197
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+LFSGG+DSS ++ ++G
Sbjct: 5 VLFSGGKDSSLSAVILKKLGYNPNLITINFG 35
>gi|205822245|sp|A2CB44|MNMA_PROM3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
Length = 409
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 63/201 (31%), Gaps = 44/201 (21%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS + ++ +VE L+ + C +++ +
Sbjct: 41 LSGGVDSSLSAALLVEAGWQVEGLTL------WLMSGKGACCSDGLIDAAGICEQLKIPH 94
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAYR-LGIT 129
H++ + V +Q T +P R++ F + A + +
Sbjct: 95 HVVDSRATFQ------AEIVDQLVQGYQQGVTPLPCSRCNRSVKFAAM-LSWAEKERQLH 147
Query: 130 NIVIG---------------VCETDYSGYPDCRHDTIRAIET-------AINLGMESHVT 167
+ G D SG RH +R ++ +L +
Sbjct: 148 RVATGHYARIRHREDPEPQQALPGDSSG----RHQLLRGLDQNKDQSYFLYDLSQDVLAK 203
Query: 168 VHTPLMWLKKYETWKLAQDIG 188
V PL L K ET + A+ G
Sbjct: 204 VIFPLGELTKAETRQEAERYG 224
>gi|124023662|ref|YP_001017969.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
MIT 9303]
gi|123963948|gb|ABM78704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prochlorococcus marinus str. MIT 9303]
Length = 431
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 63/201 (31%), Gaps = 44/201 (21%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DSS + ++ +VE L+ + C +++ +
Sbjct: 63 LSGGVDSSLSAALLVEAGWQVEGLTL------WLMSGKGACCSDGLIDAAGICEQLKIPH 116
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAYR-LGIT 129
H++ + V +Q T +P R++ F + A + +
Sbjct: 117 HVVDSRATFQ------AEIVDQLVQGYQQGVTPLPCSRCNRSVKFAAM-LSWAEKERQLH 169
Query: 130 NIVIG---------------VCETDYSGYPDCRHDTIRAIET-------AINLGMESHVT 167
+ G D SG RH +R ++ +L +
Sbjct: 170 RVATGHYARIRHREDPEPQQALPGDSSG----RHQLLRGLDQNKDQSYFLYDLSQDVLAK 225
Query: 168 VHTPLMWLKKYETWKLAQDIG 188
V PL L K ET + A+ G
Sbjct: 226 VIFPLGELTKAETRQEAERYG 246
>gi|20806605|ref|NP_621776.1| ATPase [Thermoanaerobacter tengcongensis MB4]
gi|20515049|gb|AAM23380.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Thermoanaerobacter tengcongensis MB4]
Length = 301
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QR----NKVELECRLCV 56
++ ++ SGG+DS V D G Q E+ C
Sbjct: 42 KMLPPKGRVVVAISGGKDSLVTAYVLKRLGYEVLGFFVDLGITQNDFSPRSREVVENFCK 101
Query: 57 RKKIVELMPKWKDSLGED 74
I + K+ G+D
Sbjct: 102 EHDIPLEIVDLKERYGKD 119
>gi|15668750|ref|NP_247549.1| hypothetical protein MJ_0570 [Methanocaldococcus jannaschii DSM
2661]
gi|2496048|sp|Q57990|Y570_METJA RecName: Full=Uncharacterized protein MJ0570
gi|1591277|gb|AAB98564.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 223
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRV 35
+L+SGG+DS+ L WAL V
Sbjct: 5 VLYSGGKDSNYALYWALKEGFDV 27
>gi|121998186|ref|YP_001002973.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Halorhodospira halophila SL1]
gi|166234856|sp|A1WWV9|MNMA_HALHL RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|121589591|gb|ABM62171.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Halorhodospira halophila SL1]
Length = 383
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DS+ + V L
Sbjct: 1 MTESPKRIVVGLSGGVDSAVAALRLVRAGHEVIGL 35
>gi|330833760|ref|YP_004402585.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis ST3]
gi|329307983|gb|AEB82399.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis ST3]
Length = 419
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 50 NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 82
>gi|319759218|gb|ADV71160.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis JS14]
Length = 419
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 50 NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 82
>gi|315185780|gb|EFU19546.1| GMP synthase (glutamine-hydrolyzing) [Spirochaeta thermophila DSM
6578]
Length = 517
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG--QRNKVELECR 53
LLL SGG DS+ + L F ++V L D G ++N+ E
Sbjct: 217 LLLISGGVDSTVVAALLLKTFPPEQVHLLYIDTGLMRKNETEEVEA 262
>gi|307718690|ref|YP_003874222.1| GMP synthase [Spirochaeta thermophila DSM 6192]
gi|306532415|gb|ADN01949.1| GMP synthase [Spirochaeta thermophila DSM 6192]
Length = 517
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG--QRNKVELECR 53
LLL SGG DS+ + L F ++V L D G ++N+ E
Sbjct: 217 LLLISGGVDSTVVAALLLKTFPPEQVHLLYIDTGLMRKNETEEVEA 262
>gi|268590514|ref|ZP_06124735.1| tRNA(Ile)-lysidine synthetase [Providencia rettgeri DSM 1131]
gi|291314100|gb|EFE54553.1| tRNA(Ile)-lysidine synthetase [Providencia rettgeri DSM 1131]
Length = 450
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 16/108 (14%)
Query: 9 PSALLLFSGGQDSSTCLS--WALDRFD----RVETLSFDYG-QRNKVELECRLCVRKKIV 61
L+ FSGG DS+ L + + + + + +G R E E +
Sbjct: 20 QKILVGFSGGIDSTVLLHALYLIRQQRLPSLEIRAIHIHHGLNRKANEWE------QHCA 73
Query: 62 ELMPKWKDSLGEDHILPLAILGDI---SHSSLTKNVAMKIQDNNLPNT 106
+L +W H++ + I + + + ++Q+ + T
Sbjct: 74 QLCSQWDIPFICRHVVVDSSQKGIEAAAREARYQAYREELQEGEVLVT 121
>gi|225871462|ref|YP_002747409.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus equi subsp. equi 4047]
gi|254811462|sp|C0MB53|MNMA_STRE4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|225700866|emb|CAW95613.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus equi subsp. equi 4047]
Length = 374
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 2 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 37
>gi|223933686|ref|ZP_03625662.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus suis 89/1591]
gi|223897639|gb|EEF64024.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus suis 89/1591]
Length = 419
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 50 NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 82
>gi|149182089|ref|ZP_01860573.1| hypothetical protein BSG1_08716 [Bacillus sp. SG-1]
gi|148850191|gb|EDL64357.1| hypothetical protein BSG1_08716 [Bacillus sp. SG-1]
Length = 532
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
K +L SGG DS ++ L +F ++F YG+R E + +
Sbjct: 189 KNKKIVLPLSGGYDSR-IIALLLKKFGNDNIIAFTYGKRQNKEAGISEGIAHGL 241
>gi|146322015|ref|YP_001201726.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis 98HAH33]
gi|145692821|gb|ABP93326.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Streptococcus suis 98HAH33]
gi|292559420|gb|ADE32421.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus suis GZ1]
Length = 423
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 54 NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 86
>gi|78356515|ref|YP_387964.1| GMP synthase [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|91206806|sp|Q311X7|GUAA_DESDG RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|78218920|gb|ABB38269.1| GMP synthase (glutamine-hydrolyzing) [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 516
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
+++ + + SGG DS+ R+ + D G
Sbjct: 212 VSEQVGPDDQVVCALSGGIDSTVVAVLLHKAIGHRLHCIFVDNG 255
>gi|329297165|ref|ZP_08254501.1| tRNA-specific 2-thiouridylase MnmA [Plautia stali symbiont]
Length = 370
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 4 NSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL 36
>gi|319899362|ref|YP_004159459.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Bartonella
clarridgeiae 73]
gi|319403330|emb|CBI76889.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Bartonella
clarridgeiae 73]
Length = 481
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 12 LLLFSGGQDSSTCLSWALDRFD------RVETLSFDYGQR----NKVELECRLCVRKKIV 61
+L SGG DS L + V ++ D+ R ++ E ++C +I
Sbjct: 22 ILAVSGGSDSLALLFLVQEHLKILPIAPEVIVVTIDHQLREESAHEAESVAKICHAYQIK 81
Query: 62 ELMPKWKDSLGEDHI 76
++ +W+ E I
Sbjct: 82 HIIVRWEGKKPETKI 96
>gi|312865771|ref|ZP_07725993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus downei F0415]
gi|311098646|gb|EFQ56868.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus downei F0415]
Length = 374
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 2 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 37
>gi|195979019|ref|YP_002124263.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|229487422|sp|B4U0P1|MNMA_STREM RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|195975724|gb|ACG63250.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
[Streptococcus equi subsp. zooepidemicus MGCS10565]
Length = 374
Score = 36.4 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 2 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 37
>gi|327490349|gb|EGF22136.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis SK1058]
Length = 425
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 14/91 (15%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVE---TL-SFDYGQRNKVELECRLCVRKKIV 61
+ L+ SGG DS T L +D + + ++ QR E + KI
Sbjct: 17 QDHRKVLVAVSGGLDSMTLLQLLIDSQKELAIELAIAHVNHKQR--PESDQEEKALVKIA 74
Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTK 92
E + I + GD S ++ +
Sbjct: 75 EQLGV--------KIFTSSFSGDFSENAARQ 97
>gi|304312484|ref|YP_003812082.1| Predicted tRNA(Ile)-lysidine synthetase [gamma proteobacterium
HdN1]
gi|301798217|emb|CBL46439.1| Predicted tRNA(Ile)-lysidine synthetase [gamma proteobacterium
HdN1]
Length = 463
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 13/75 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYG--------QRNKVELECRLCVRKK 59
L+ FSGG DS+ L A + + + ++ Q++ V+L +
Sbjct: 23 LVGFSGGLDSTVLLYLARRWSLQSSVPIVAVHVNHQLSAHAFAWQQHCVDLCEAWGIALH 82
Query: 60 IVELMPKWKDSLGED 74
E + +G +
Sbjct: 83 -CEAVHVDAHGVGVE 96
>gi|221067906|ref|ZP_03544011.1| NAD+ synthetase [Comamonas testosteroni KF-1]
gi|220712929|gb|EED68297.1| NAD+ synthetase [Comamonas testosteroni KF-1]
Length = 535
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 9 PSALLLFSGGQDSSTCLSWALD 30
P AL+ SGG DS+ L+ A+D
Sbjct: 273 PGALIGLSGGMDSALVLAIAVD 294
>gi|171778579|ref|ZP_02919706.1| hypothetical protein STRINF_00558 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|171282802|gb|EDT48226.1| hypothetical protein STRINF_00558 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 406
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 34 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 69
>gi|149912904|ref|ZP_01901438.1| argininosuccinate synthase [Roseobacter sp. AzwK-3b]
gi|149813310|gb|EDM73136.1| argininosuccinate synthase [Roseobacter sp. AzwK-3b]
Length = 408
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ EL+ + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELDPARQKAEML 55
>gi|150021282|ref|YP_001306636.1| NAD synthetase [Thermosipho melanesiensis BI429]
gi|149793803|gb|ABR31251.1| NAD+ synthetase [Thermosipho melanesiensis BI429]
Length = 574
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVE----LECRLCVRKKI 60
++ SGG DSS + A++ + L Y + +E L L ++ I
Sbjct: 316 KKVVIGLSGGMDSSLVAAIAVEALGKDNVLGILMPSMYSSSHSIEDAKNLAENLGIKYYI 375
Query: 61 VELMPKWKDSLGEDHILPLAILGDISH 87
+++ + + E + DI+
Sbjct: 376 IKIENIYYSFVNELKEIFSNTKEDITE 402
>gi|114769872|ref|ZP_01447482.1| argininosuccinate synthase [alpha proteobacterium HTCC2255]
gi|114549577|gb|EAU52459.1| argininosuccinate synthase [alpha proteobacterium HTCC2255]
Length = 406
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W ++ V T + D GQ EL+ + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLEIEYGCEVVTFTADLGQ--GEELDPARKKAELL 55
>gi|55821970|ref|YP_140412.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus thermophilus
LMG 18311]
gi|55823887|ref|YP_142328.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus thermophilus
CNRZ1066]
gi|81558821|sp|Q5LXJ9|MNMA_STRT1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|81560008|sp|Q5M249|MNMA_STRT2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|55737955|gb|AAV61597.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Streptococcus thermophilus LMG 18311]
gi|55739872|gb|AAV63513.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Streptococcus thermophilus CNRZ1066]
gi|312279316|gb|ADQ63973.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Streptococcus thermophilus ND03]
Length = 373
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|317501433|ref|ZP_07959632.1| argininosuccinate synthase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088088|ref|ZP_08337009.1| argininosuccinate synthase [Lachnospiraceae bacterium 3_1_46FAA]
gi|316897177|gb|EFV19249.1| argininosuccinate synthase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330409044|gb|EGG88503.1| argininosuccinate synthase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 411
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + +L +SGG D+S + W + +D V + + GQ ++++ + V +
Sbjct: 1 MSEIKKVVLAYSGGLDTSVIIPWLKEHYDNCEVIAVCGNVGQDDELDDLKQRAVASGASK 60
Query: 63 LM-PKWKDSLGEDHILP 78
L D + ++P
Sbjct: 61 LYVEDLTDEFVNEFVIP 77
>gi|312374023|gb|EFR21676.1| hypothetical protein AND_16612 [Anopheles darlingi]
Length = 828
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
K + L SGG+DS+ + V L+ + +++ EL+ + +
Sbjct: 11 KKMRVVALVSGGKDSTYNMMQVTAEGHEVVALA-NLHPKDRDELDS-----YMYQTVGHQ 64
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
+ L E LPL HS TK +D+ + + +
Sbjct: 65 GIEKLAEAMELPLYRRMTRGHSINTKRHYEPTEDDEVEDLY 105
>gi|269140024|ref|YP_003296725.1| hypothetical protein ETAE_2679 [Edwardsiella tarda EIB202]
gi|267985685|gb|ACY85514.1| hypothetical protein ETAE_2679 [Edwardsiella tarda EIB202]
gi|304559854|gb|ADM42518.1| Co-activator of prophage gene expression IbrA [Edwardsiella tarda
FL6-60]
Length = 403
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALD 30
MN + + P + FSGG+DS+ L A +
Sbjct: 18 MNWVFETFPRVCVSFSGGKDSTVLLHIAAE 47
>gi|251792204|ref|YP_003006924.1| argininosuccinate synthase [Aggregatibacter aphrophilus NJ8700]
gi|247533591|gb|ACS96837.1| argininosuccinate synthase [Aggregatibacter aphrophilus NJ8700]
Length = 445
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 25/65 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + FSGG D+S L W + + GQ ++ + + K+ M
Sbjct: 9 LPKGEKVGIAFSGGLDTSAALLWMRQHGAIPCAYTANLGQPDEDDYDAIPRKAKEYGAEM 68
Query: 65 PKWKD 69
+ D
Sbjct: 69 ARLID 73
>gi|153813937|ref|ZP_01966605.1| hypothetical protein RUMTOR_00144 [Ruminococcus torques ATCC 27756]
gi|145848333|gb|EDK25251.1| hypothetical protein RUMTOR_00144 [Ruminococcus torques ATCC 27756]
Length = 446
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + +L +SGG D+S + W + +D V + + GQ ++++ + V +
Sbjct: 36 MSEIKKVVLAYSGGLDTSVIIPWLKEHYDNCEVIAVCGNVGQDDELDDLKQRAVASGASK 95
Query: 63 LM-PKWKDSLGEDHILP 78
L D + ++P
Sbjct: 96 LYVEDLTDEFVNEFVIP 112
>gi|189426122|ref|YP_001953299.1| tRNA-specific 2-thiouridylase MnmA [Geobacter lovleyi SZ]
gi|226704771|sp|B3E966|MNMA_GEOLS RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|189422381|gb|ACD96779.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Geobacter lovleyi SZ]
Length = 354
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DSS + + V ++
Sbjct: 6 VAMSGGVDSSVVAALLQQQGHEVIGIT 32
>gi|297618698|ref|YP_003706803.1| cell cycle control-like ATPase [Methanococcus voltae A3]
gi|297377675|gb|ADI35830.1| ATPase of the PP-loop superfamily protein implicated in cell
cycle control-like protein [Methanococcus voltae A3]
Length = 367
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 8 APSALLLFSGGQDSSTCLSWALD-RFDRVETLSF 40
ALL+ SGG+DS+T L+ + + V + +
Sbjct: 59 NKKALLMLSGGKDSATALALCKELNINVVLCIHY 92
>gi|187478133|ref|YP_786157.1| NAD synthetase [Bordetella avium 197N]
gi|115422719|emb|CAJ49246.1| glutamine-dependent NAD synthetase [Bordetella avium 197N]
Length = 542
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 9 PSALLLFSGGQDSSTCLSWALD 30
P A++ SGG DS+ L+ A+D
Sbjct: 284 PGAIIGLSGGIDSAVVLAIAVD 305
>gi|23099469|ref|NP_692935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methy ltransferase
[Oceanobacillus iheyensis HTE831]
gi|30173412|sp|Q8CXC7|MNMA_OCEIH RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|22777698|dbj|BAC13970.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
[Oceanobacillus iheyensis HTE831]
Length = 371
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS + V +
Sbjct: 3 NNKDTRVVVGMSGGVDSSVAALLLKQQGYDVVGI 36
>gi|322515969|ref|ZP_08068909.1| argininosuccinate synthase [Streptococcus vestibularis ATCC
49124]
gi|322125568|gb|EFX96903.1| argininosuccinate synthase [Streptococcus vestibularis ATCC
49124]
Length = 403
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+I+ K +L +SGG D+S ++W +D V + D G+ +E + VE
Sbjct: 3 NIMSK-EKVILAYSGGLDTSVAITWLKKDYD-VIAVCMDVGEGKNLEFIHDKALTVGAVE 60
Query: 63 -LMPKWKDSLGEDHILP 78
+ KD ED++LP
Sbjct: 61 SYVLDVKDEFAEDYVLP 77
>gi|291288176|ref|YP_003504992.1| Queuosine synthesis-like protein [Denitrovibrio acetiphilus DSM
12809]
gi|290885336|gb|ADD69036.1| Queuosine synthesis-like protein [Denitrovibrio acetiphilus DSM
12809]
Length = 223
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 12/64 (18%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETL-----SFDYGQRNKVELECR 53
M K +A++ SGG DS+ L A + V + F + ELE
Sbjct: 1 MKAYFSKYNNAIVALSGGADSAAVLMLAAEHIGKNNVLAVTCVNQHFF-----ESELENA 55
Query: 54 LCVR 57
+
Sbjct: 56 AKIA 59
>gi|167040416|ref|YP_001663401.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X514]
gi|300913703|ref|ZP_07131020.1| tRNA methyl transferase-like protein [Thermoanaerobacter sp.
X561]
gi|307723282|ref|YP_003903033.1| ATPase [Thermoanaerobacter sp. X513]
gi|166854656|gb|ABY93065.1| PP-loop domain protein [Thermoanaerobacter sp. X514]
gi|300890388|gb|EFK85533.1| tRNA methyl transferase-like protein [Thermoanaerobacter sp.
X561]
gi|307580343|gb|ADN53742.1| ATPase [Thermoanaerobacter sp. X513]
Length = 297
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 13/41 (31%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++ ++ SGG+DS V D G
Sbjct: 42 KMLPPKGRVVVAISGGKDSLVTAYVLKKLGYEVLGFFIDLG 82
>gi|71894390|ref|YP_278498.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Mycoplasma synoviae 53]
gi|123644146|sp|Q4A634|MNMA_MYCS5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|71851178|gb|AAZ43787.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
[Mycoplasma synoviae 53]
Length = 372
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 6/32 (18%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRFDRV 35
++ +++ SGG DSS ++ +
Sbjct: 1 MQNNKKTVVVGLSGGVDSSVAAYLLKKNYNVI 32
>gi|34557952|ref|NP_907767.1| tRNA-specific 2-thiouridylase MnmA [Wolinella succinogenes DSM
1740]
gi|81653445|sp|Q7M8I9|MNMA_WOLSU RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|34483670|emb|CAE10667.1| TRNA METHYLTRANSFERASE [Wolinella succinogenes]
Length = 345
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 41/126 (32%), Gaps = 18/126 (14%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
LL SGG DSS + V + Y + + +L+ ++ + K LG
Sbjct: 5 LLMSGGIDSSYSAYLLQEAGHEVVGI---YLKLHDNDLKHAQNIQN-----IEKVSQKLG 56
Query: 73 -EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP--GRNIIF-LVFAATLAYRLGI 128
E HI ++ + Q PN P N FA A LG
Sbjct: 57 IETHIFD---AKELFKKHVYDYFVDSYQKGLTPN---PCAFCNPFMKFGFALERALELGC 110
Query: 129 TNIVIG 134
I G
Sbjct: 111 EKIATG 116
>gi|238784206|ref|ZP_04628219.1| NAD+ synthase [Yersinia bercovieri ATCC 43970]
gi|238714915|gb|EEQ06914.1| NAD+ synthase [Yersinia bercovieri ATCC 43970]
Length = 540
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ L+ A+D D+V+ L F Y + + K+ E++
Sbjct: 283 AVLGLSGGIDSALTLAIAVDALGKDKVQALMMPFRY------TADISIADAKEEAEILGI 336
Query: 67 WKDSLGEDHILPLAILGDIS 86
D L + + A +G ++
Sbjct: 337 EFDVLSIEPMFD-AFMGQLA 355
>gi|307720710|ref|YP_003891850.1| PP-loop domain-containing protein [Sulfurimonas autotrophica DSM
16294]
gi|306978803|gb|ADN08838.1| PP-loop domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 249
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 30/145 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRF------DRVETLSFDYGQRNKVELECRLCV 56
+I++ L+ SGG+DS T + ++ ++ YG + C
Sbjct: 21 KLIEEGDKILVGLSGGKDSLTMIHAMKEQQRRAPFAFEFIAVTVSYGMGENFDKLSAHCR 80
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
I H++ D++ + KN + + + ++
Sbjct: 81 EHGI-------------QHVIKETQTYDLAKEKIRKNSSFCSFFSRMRRGYL-------- 119
Query: 117 VFAATLAYRLGITNIVIGVCETDYS 141
++A LG + +G D +
Sbjct: 120 ---YSVAKELGCNKVALGHHMDDAA 141
>gi|302670955|ref|YP_003830915.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
[Butyrivibrio proteoclasticus B316]
gi|302395428|gb|ADL34333.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
[Butyrivibrio proteoclasticus B316]
Length = 373
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE 36
+ + + +AL+ SGG DSS + L +
Sbjct: 9 VTETKVEKNTALIAMSGGVDSSVAAALTLKKGYNCI 44
>gi|261402866|ref|YP_003247090.1| ATP binding protein [Methanocaldococcus vulcanius M7]
gi|261369859|gb|ACX72608.1| ATP binding protein [Methanocaldococcus vulcanius M7]
Length = 223
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRV 35
+L+SGG+DS+ L WAL + V
Sbjct: 5 VLYSGGKDSNYALYWALKQGFDV 27
>gi|256810720|ref|YP_003128089.1| ATP binding protein [Methanocaldococcus fervens AG86]
gi|256793920|gb|ACV24589.1| ATP binding protein [Methanocaldococcus fervens AG86]
Length = 223
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRV 35
+L+SGG+DS+ L WAL V
Sbjct: 5 VLYSGGKDSNYALYWALKEGFNV 27
>gi|228477995|ref|ZP_04062606.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus salivarius SK126]
gi|228250175|gb|EEK09428.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus salivarius SK126]
Length = 373
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|223986315|ref|ZP_03636326.1| hypothetical protein HOLDEFILI_03636 [Holdemania filiformis DSM
12042]
gi|223961723|gb|EEF66224.1| hypothetical protein HOLDEFILI_03636 [Holdemania filiformis DSM
12042]
Length = 435
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
LL SGG DSS + + ++ + ++G K E E + V +
Sbjct: 141 KKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKGESESVIEVFR 191
>gi|123966991|ref|YP_001012072.1| PP family ATPase [Prochlorococcus marinus str. MIT 9515]
gi|123201357|gb|ABM72965.1| ATP-utilizing enzymes of the PP-loop superfamily [Prochlorococcus
marinus str. MIT 9515]
Length = 252
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 41/190 (21%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+K S + +SGG DS+ S A ++ + ++ + K +++
Sbjct: 1 MKNLNSVCVAYSGGVDSTLVASLAFEQLGSKAIAVT-----------GVSPALAKTLLDE 49
Query: 64 MPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
+G +H+ + + L S+S KN + +T L
Sbjct: 50 AKSQAKWIGINHLEIETSELDQSSYSKNPKNRCFACKKELHKHT-------------TYL 96
Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
+ +L + GV D Y R I+A V +PL K +
Sbjct: 97 SKKLNYKIVCDGVNLDDLGDY---RPG-IKA---------AKDAGVVSPLAKFNFTKKDI 143
Query: 181 WKLAQDIGGQ 190
+++ +G
Sbjct: 144 RDISRALGFP 153
>gi|170723226|ref|YP_001750914.1| tRNA(Ile)-lysidine synthetase [Pseudomonas putida W619]
gi|169761229|gb|ACA74545.1| tRNA(Ile)-lysidine synthetase [Pseudomonas putida W619]
Length = 426
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 15 FSGGQDSSTCLSWALDRFDRVET 37
FSGG DS+ L W L + R+
Sbjct: 17 FSGGLDSTVLLHW-LADYARIHA 38
>gi|268679904|ref|YP_003304335.1| Queuosine synthesis-like protein [Sulfurospirillum deleyianum DSM
6946]
gi|268617935|gb|ACZ12300.1| Queuosine synthesis-like protein [Sulfurospirillum deleyianum DSM
6946]
Length = 261
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 41/180 (22%)
Query: 12 LLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
++ FSGG DSS L A D + V +S + E+E + +I
Sbjct: 19 IVAFSGGVDSSFLLKTAYDVLGENVLAISLQTPYIAESEIEEARRIADEIGA-------- 70
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
+L + ++ + + K +F T A +
Sbjct: 71 --RHLVLVKPWMEELRTNPKERCYLCKH--------------ALFSSL-TTFAQQRDFRV 113
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKKYETWKLAQDIG 188
I G D +E +++ TPL+ L K E L++ +G
Sbjct: 114 IAEGSNVDD-------------TMEKRPGRVALLELSILTPLLDVGLSKAEIRLLSKAVG 160
>gi|5734549|emb|CAB52775.1| unnamed protein product [Methanothermobacter thermautotrophicus]
Length = 167
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 34/137 (24%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L FSGG D+S C+ +++ V T D GQ + E+E V +++
Sbjct: 11 DKVVLAFSGGLDTSVCIKLLEEKYGMEVITACVDVGQ-PREEVERPARVAEELGNY---- 65
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT------ 121
+ H + + + + + + P L A
Sbjct: 66 -----KHHTVDARE--EFAENYIFPAIKANAVYEGYP-----------LSTALARPLIAE 107
Query: 122 ----LAYRLGITNIVIG 134
+A G + I G
Sbjct: 108 KIVEVAESEGASAIAHG 124
>gi|85706906|ref|ZP_01037996.1| argininosuccinate synthase [Roseovarius sp. 217]
gi|85668517|gb|EAQ23388.1| argininosuccinate synthase [Roseovarius sp. 217]
Length = 408
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L +SGG D+S L W + V T + D GQ EL+ + +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELDPARQKAEML 55
>gi|296435803|gb|ADH17977.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis G/9768]
gi|296437663|gb|ADH19824.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis
G/11074]
gi|297140162|gb|ADH96920.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis G/9301]
Length = 358
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETL 38
+ ++ SGG DSS + V L
Sbjct: 1 MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGL 33
>gi|260551475|ref|ZP_05825659.1| ATPase [Acinetobacter sp. RUH2624]
gi|260405469|gb|EEW98962.1| ATPase [Acinetobacter sp. RUH2624]
Length = 228
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELECRLCVRKKI 60
+++ FSGG+DSS L A+ + + + ++GQR + + L+ K I
Sbjct: 11 NRQSIVSFSGGKDSSLALYDAMRTGNVIGLIVMLEEHGQRSRSHAMPLDIIQAQAKAI 68
>gi|271967350|ref|YP_003341546.1| argininosuccinate synthase [Streptosporangium roseum DSM 43021]
gi|270510525|gb|ACZ88803.1| Argininosuccinate synthase [Streptosporangium roseum DSM 43021]
Length = 399
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ 44
+L FSGG D+S + A V ++ D GQ
Sbjct: 1 MNDRVVLAFSGGLDTSVAIPFLAEKTGAEVIAVAVDVGQ 39
>gi|225620287|ref|YP_002721544.1| putative Cell cycle protein MesJ [Brachyspira hyodysenteriae WA1]
gi|225215106|gb|ACN83840.1| putative Cell cycle protein MesJ [Brachyspira hyodysenteriae WA1]
Length = 450
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 8/68 (11%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQR----NKVELECRLCVRK 58
K + + +SGG DS L+ A D + + +Y R EL R +K
Sbjct: 17 KNKTLAVAYSGGIDSQVLLNIAYRLKDELSFDLIIIHVNYNLRGEDSTNDELFARDMAKK 76
Query: 59 KIVELMPK 66
+E+ K
Sbjct: 77 YNIEIYVK 84
>gi|146337407|ref|YP_001202455.1| argininosuccinate synthase [Bradyrhizobium sp. ORS278]
gi|226729212|sp|A4YJX9|ASSY_BRASO RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|146190213|emb|CAL74205.1| argininosuccinate synthetase [Bradyrhizobium sp. ORS278]
Length = 448
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
FSGG D+S L W + R + + GQ
Sbjct: 18 FSGGLDTSAALLWMKQKGARCFAYTANLGQ 47
>gi|15835177|ref|NP_296936.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia muridarum Nigg]
gi|7190601|gb|AAF39399.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia muridarum Nigg]
Length = 373
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF-DRVETL 38
+ ++ SGG DSS + V L
Sbjct: 17 RKTVIVAMSGGVDSSVVAYLLKKQGKYDVIGL 48
>gi|311031538|ref|ZP_07709628.1| tRNA-specific 2-thiouridylase MnmA [Bacillus sp. m3-13]
Length = 371
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 5 IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ KAP ++ SGG DSS ++ V +
Sbjct: 1 MTKAPKDTRVVIGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|260171966|ref|ZP_05758378.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides sp. D2]
Length = 350
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 15 FSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELMPKWKD 69
SGG DS+ TCL ++ + ++ D Q + EL R+ + + + +K+
Sbjct: 1 MSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAVRMGIEHYVADERIPFKE 58
Query: 70 SLGEDHI 76
++ ++ I
Sbjct: 59 TIVKNFI 65
>gi|239830925|ref|ZP_04679254.1| argininosuccinate synthase [Ochrobactrum intermedium LMG 3301]
gi|239823192|gb|EEQ94760.1| argininosuccinate synthase [Ochrobactrum intermedium LMG 3301]
Length = 406
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAEMLGIKEIF 64
>gi|238062586|ref|ZP_04607295.1| sulfate adenylyltransferase subunit 2 [Micromonospora sp. ATCC
39149]
gi|237884397|gb|EEP73225.1| sulfate adenylyltransferase subunit 2 [Micromonospora sp. ATCC
39149]
Length = 281
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF 32
M +++ + +LLFSGG+DS L A F
Sbjct: 1 MREVVAEMERPVLLFSGGKDSIVMLRLAQKAF 32
>gi|237729494|ref|ZP_04559975.1| tRNA(Ile)-lysidine synthetase [Citrobacter sp. 30_2]
gi|226909223|gb|EEH95141.1| tRNA(Ile)-lysidine synthetase [Citrobacter sp. 30_2]
Length = 431
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Query: 9 PSALLLFSGGQDSSTCLS---WALDRFDRVE--TLSFDYG 43
S L+ FSGG DS+ L + V + +G
Sbjct: 14 QSILVAFSGGLDSTVLLHQLVQWRAQHPEVALRAIHIHHG 53
>gi|255654281|ref|ZP_05399690.1| GMP synthase [Clostridium difficile QCD-23m63]
gi|296452570|ref|ZP_06894265.1| GMP synthase (glutamine-hydrolyzing) [Clostridium difficile NAP08]
gi|296881018|ref|ZP_06904963.1| GMP synthase (glutamine-hydrolyzing) [Clostridium difficile NAP07]
gi|296258593|gb|EFH05493.1| GMP synthase (glutamine-hydrolyzing) [Clostridium difficile NAP08]
gi|296427977|gb|EFH13879.1| GMP synthase (glutamine-hydrolyzing) [Clostridium difficile NAP07]
Length = 511
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYG 43
AL SGG DSS D + + D+G
Sbjct: 216 KKALCALSGGVDSSVAAVLIHKAIGDNLTCIFVDHG 251
>gi|225626620|ref|ZP_03784659.1| argininosuccinate synthase [Brucella ceti str. Cudo]
gi|260169657|ref|ZP_05756468.1| argininosuccinate synthase [Brucella sp. F5/99]
gi|261759189|ref|ZP_06002898.1| argininosuccinate synthase [Brucella sp. F5/99]
gi|225618277|gb|EEH15320.1| argininosuccinate synthase [Brucella ceti str. Cudo]
gi|261739173|gb|EEY27169.1| argininosuccinate synthase [Brucella sp. F5/99]
Length = 406
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAEMLGIKEIF 64
>gi|222150070|ref|YP_002551027.1| argininosuccinate synthase [Agrobacterium vitis S4]
gi|221737052|gb|ACM38015.1| argininosuccinate synthase [Agrobacterium vitis S4]
Length = 409
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAEMLGIKEIF 64
>gi|172044120|sp|A6WV13|ASSY_OCHA4 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
Length = 406
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAEMLGIKEIF 64
>gi|153875033|ref|ZP_02003007.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Beggiatoa sp. PS]
gi|152068503|gb|EDN66993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Beggiatoa sp. PS]
Length = 359
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + V+ L
Sbjct: 2 KVIVGMSGGVDSSVAALLLKKQGYEVQGL 30
>gi|153007431|ref|YP_001368646.1| argininosuccinate synthase [Ochrobactrum anthropi ATCC 49188]
gi|151559319|gb|ABS12817.1| Argininosuccinate synthase [Ochrobactrum anthropi ATCC 49188]
Length = 412
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 11 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAEMLGIKEIF 70
>gi|126697769|ref|YP_001086666.1| GMP synthase [Clostridium difficile 630]
gi|255099361|ref|ZP_05328338.1| GMP synthase [Clostridium difficile QCD-63q42]
gi|255305194|ref|ZP_05349366.1| GMP synthase [Clostridium difficile ATCC 43255]
gi|123067183|sp|Q18CT8|GUAA_CLOD6 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|115249206|emb|CAJ67019.1| Glutamine amidotransferase [Clostridium difficile]
Length = 511
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYG 43
AL SGG DSS D + + D+G
Sbjct: 216 KKALCALSGGVDSSVAAVLIHKAIGDNLTCIFVDHG 251
>gi|94501751|ref|ZP_01308265.1| NAD synthase [Oceanobacter sp. RED65]
gi|94426151|gb|EAT11145.1| NAD synthase [Oceanobacter sp. RED65]
Length = 543
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDR--FDRVETLS--FDYGQR---NKVELEC-RL 54
+ K ++L SGG DS+ L+ A+D +RV+ + F Y + + E E RL
Sbjct: 279 VNKNGFKGVVLGLSGGIDSALTLAVAVDALGKERVQAIMMPFKYTSQMSLHDAEDEANRL 338
Query: 55 CVRKKIVELMPKWKDSLGE 73
V K++ + P + +G
Sbjct: 339 GVEYKVMPIEPMFDAFMGT 357
>gi|254973858|ref|ZP_05270330.1| GMP synthase [Clostridium difficile QCD-66c26]
gi|255091243|ref|ZP_05320721.1| GMP synthase [Clostridium difficile CIP 107932]
gi|255312902|ref|ZP_05354485.1| GMP synthase [Clostridium difficile QCD-76w55]
gi|255515661|ref|ZP_05383337.1| GMP synthase [Clostridium difficile QCD-97b34]
gi|255648755|ref|ZP_05395657.1| GMP synthase [Clostridium difficile QCD-37x79]
gi|260681975|ref|YP_003213260.1| GMP synthase [Clostridium difficile CD196]
gi|260685573|ref|YP_003216706.1| GMP synthase [Clostridium difficile R20291]
gi|306518872|ref|ZP_07405219.1| GMP synthase [Clostridium difficile QCD-32g58]
gi|260208138|emb|CBA60429.1| GMP synthase [glutamine-hydrolyzing] [Clostridium difficile CD196]
gi|260211589|emb|CBE01801.1| GMP synthase, glutamine-hydrolyzing [Clostridium difficile R20291]
Length = 511
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYG 43
AL SGG DSS D + + D+G
Sbjct: 216 KKALCALSGGVDSSVAAVLIHKAIGDNLTCIFVDHG 251
>gi|76789009|ref|YP_328095.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis A/HAR-13]
gi|123606993|sp|Q3KM75|MNMA_CHLTA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|76167539|gb|AAX50547.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis A/HAR-13]
Length = 358
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETL 38
+ ++ SGG DSS + V L
Sbjct: 1 MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGL 33
>gi|15605008|ref|NP_219792.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis
D/UW-3/CX]
gi|237804632|ref|YP_002888786.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis
B/TZ1A828/OT]
gi|255317389|ref|ZP_05358635.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis 6276s]
gi|6647880|sp|O84289|MNMA_CHLTR RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|3328701|gb|AAC67880.1| PP-loop superfamily ATPase [Chlamydia trachomatis D/UW-3/CX]
gi|231272932|emb|CAX09843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis B/TZ1A828/OT]
gi|296436728|gb|ADH18898.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis
G/11222]
gi|297748416|gb|ADI50962.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis D-EC]
gi|297749296|gb|ADI51974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis D-LC]
Length = 358
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETL 38
+ ++ SGG DSS + V L
Sbjct: 1 MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGL 33
>gi|24216919|ref|NP_714400.1| sulfate adenylyltransferase subunit 2 [Leptospira interrogans
serovar Lai str. 56601]
gi|45659190|ref|YP_003276.1| sulfate adenylyltransferase subunit 2 [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|24198306|gb|AAN51418.1| sulfate adenylyltransferase subunit 2 [Leptospira interrogans
serovar Lai str. 56601]
gi|45602436|gb|AAS71913.1| sulfate adenylyltransferase subunit 2 [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 305
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 13 LLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
LLFSGG+DS T + AL F + D G + L+ R + KI E +
Sbjct: 36 LLFSGGKDSITLVHLALKAFRPGKFPFPLVHIDTGHNFQEALDFRDELASKIGEKL 91
>gi|17988153|ref|NP_540787.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. 16M]
gi|62289060|ref|YP_220853.1| argininosuccinate synthase [Brucella abortus bv. 1 str. 9-941]
gi|82698997|ref|YP_413571.1| argininosuccinate synthase [Brucella melitensis biovar Abortus
2308]
gi|148559600|ref|YP_001258116.1| argininosuccinate synthase [Brucella ovis ATCC 25840]
gi|161618062|ref|YP_001591949.1| argininosuccinate synthase [Brucella canis ATCC 23365]
gi|163842349|ref|YP_001626753.1| argininosuccinate synthase [Brucella suis ATCC 23445]
gi|189023333|ref|YP_001934101.1| argininosuccinate synthase [Brucella abortus S19]
gi|225851615|ref|YP_002731848.1| argininosuccinate synthase [Brucella melitensis ATCC 23457]
gi|237814547|ref|ZP_04593545.1| argininosuccinate synthase [Brucella abortus str. 2308 A]
gi|254690386|ref|ZP_05153640.1| argininosuccinate synthase [Brucella abortus bv. 6 str. 870]
gi|254694874|ref|ZP_05156702.1| argininosuccinate synthase [Brucella abortus bv. 3 str. Tulya]
gi|254696503|ref|ZP_05158331.1| argininosuccinate synthase [Brucella abortus bv. 2 str. 86/8/59]
gi|254700888|ref|ZP_05162716.1| argininosuccinate synthase [Brucella suis bv. 5 str. 513]
gi|254705253|ref|ZP_05167081.1| argininosuccinate synthase [Brucella suis bv. 3 str. 686]
gi|254707225|ref|ZP_05169053.1| argininosuccinate synthase [Brucella pinnipedialis M163/99/10]
gi|254709230|ref|ZP_05171041.1| argininosuccinate synthase [Brucella pinnipedialis B2/94]
gi|254713347|ref|ZP_05175158.1| argininosuccinate synthase [Brucella ceti M644/93/1]
gi|254716299|ref|ZP_05178110.1| argininosuccinate synthase [Brucella ceti M13/05/1]
gi|254718294|ref|ZP_05180105.1| argininosuccinate synthase [Brucella sp. 83/13]
gi|254731416|ref|ZP_05189994.1| argininosuccinate synthase [Brucella abortus bv. 4 str. 292]
gi|256030753|ref|ZP_05444367.1| argininosuccinate synthase [Brucella pinnipedialis M292/94/1]
gi|256045866|ref|ZP_05448740.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. Rev.1]
gi|256060218|ref|ZP_05450394.1| argininosuccinate synthase [Brucella neotomae 5K33]
gi|256112579|ref|ZP_05453500.1| argininosuccinate synthase [Brucella melitensis bv. 3 str. Ether]
gi|256158771|ref|ZP_05456637.1| argininosuccinate synthase [Brucella ceti M490/95/1]
gi|256254158|ref|ZP_05459694.1| argininosuccinate synthase [Brucella ceti B1/94]
gi|256258640|ref|ZP_05464176.1| argininosuccinate synthase [Brucella abortus bv. 9 str. C68]
gi|256264874|ref|ZP_05467406.1| argininosuccinate synthase [Brucella melitensis bv. 2 str. 63/9]
gi|256368540|ref|YP_003106046.1| argininosuccinate synthase [Brucella microti CCM 4915]
gi|260546353|ref|ZP_05822093.1| argininosuccinate synthase [Brucella abortus NCTC 8038]
gi|260563153|ref|ZP_05833639.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. 16M]
gi|260567280|ref|ZP_05837750.1| argininosuccinate synthase [Brucella suis bv. 4 str. 40]
gi|260755930|ref|ZP_05868278.1| argininosuccinate synthase [Brucella abortus bv. 6 str. 870]
gi|260759154|ref|ZP_05871502.1| argininosuccinate synthase [Brucella abortus bv. 4 str. 292]
gi|260760878|ref|ZP_05873221.1| argininosuccinate synthase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884954|ref|ZP_05896568.1| argininosuccinate synthase [Brucella abortus bv. 9 str. C68]
gi|261215205|ref|ZP_05929486.1| argininosuccinate synthase [Brucella abortus bv. 3 str. Tulya]
gi|261218077|ref|ZP_05932358.1| argininosuccinate synthase [Brucella ceti M13/05/1]
gi|261221304|ref|ZP_05935585.1| argininosuccinate synthase [Brucella ceti B1/94]
gi|261314708|ref|ZP_05953905.1| argininosuccinate synthase [Brucella pinnipedialis M163/99/10]
gi|261316733|ref|ZP_05955930.1| argininosuccinate synthase [Brucella pinnipedialis B2/94]
gi|261321076|ref|ZP_05960273.1| argininosuccinate synthase [Brucella ceti M644/93/1]
gi|261324191|ref|ZP_05963388.1| argininosuccinate synthase [Brucella neotomae 5K33]
gi|261751400|ref|ZP_05995109.1| argininosuccinate synthase [Brucella suis bv. 5 str. 513]
gi|261755963|ref|ZP_05999672.1| argininosuccinate synthase [Brucella suis bv. 3 str. 686]
gi|265983254|ref|ZP_06095989.1| argininosuccinate synthase [Brucella sp. 83/13]
gi|265987804|ref|ZP_06100361.1| argininosuccinate synthase [Brucella pinnipedialis M292/94/1]
gi|265992280|ref|ZP_06104837.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994020|ref|ZP_06106577.1| argininosuccinate synthase [Brucella melitensis bv. 3 str. Ether]
gi|265997266|ref|ZP_06109823.1| argininosuccinate synthase [Brucella ceti M490/95/1]
gi|294851479|ref|ZP_06792152.1| argininosuccinate synthase [Brucella sp. NVSL 07-0026]
gi|297247477|ref|ZP_06931195.1| argininosuccinate synthase [Brucella abortus bv. 5 str. B3196]
gi|306838905|ref|ZP_07471733.1| argininosuccinate synthase [Brucella sp. NF 2653]
gi|306842620|ref|ZP_07475269.1| argininosuccinate synthase [Brucella sp. BO2]
gi|306846342|ref|ZP_07478893.1| argininosuccinate synthase [Brucella sp. BO1]
gi|24211509|sp|Q8YEK8|ASSY_BRUME RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|75505369|sp|Q57FU2|ASSY_BRUAB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|119361259|sp|Q2YPQ8|ASSY_BRUA2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|166219948|sp|A5VN19|ASSY_BRUO2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|189046382|sp|A9M6S7|ASSY_BRUC2 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|189046383|sp|B0CII7|ASSY_BRUSI RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|229889863|sp|B2S7X3|ASSY_BRUA1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|254807511|sp|C0RGD6|ASSY_BRUMB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|17983911|gb|AAL53051.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. 16M]
gi|62195192|gb|AAX73492.1| ArgG, argininosuccinate synthase [Brucella abortus bv. 1 str.
9-941]
gi|82615098|emb|CAJ10027.1| Argininosuccinate synthase [Brucella melitensis biovar Abortus
2308]
gi|148370857|gb|ABQ60836.1| argininosuccinate synthase [Brucella ovis ATCC 25840]
gi|161334873|gb|ABX61178.1| argininosuccinate synthase [Brucella canis ATCC 23365]
gi|163673072|gb|ABY37183.1| argininosuccinate synthase [Brucella suis ATCC 23445]
gi|189018905|gb|ACD71627.1| Argininosuccinate synthase [Brucella abortus S19]
gi|225639980|gb|ACN99893.1| argininosuccinate synthase [Brucella melitensis ATCC 23457]
gi|237789384|gb|EEP63594.1| argininosuccinate synthase [Brucella abortus str. 2308 A]
gi|255998698|gb|ACU47097.1| argininosuccinate synthase [Brucella microti CCM 4915]
gi|260096460|gb|EEW80336.1| argininosuccinate synthase [Brucella abortus NCTC 8038]
gi|260153169|gb|EEW88261.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. 16M]
gi|260156798|gb|EEW91878.1| argininosuccinate synthase [Brucella suis bv. 4 str. 40]
gi|260669472|gb|EEX56412.1| argininosuccinate synthase [Brucella abortus bv. 4 str. 292]
gi|260671310|gb|EEX58131.1| argininosuccinate synthase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676038|gb|EEX62859.1| argininosuccinate synthase [Brucella abortus bv. 6 str. 870]
gi|260874482|gb|EEX81551.1| argininosuccinate synthase [Brucella abortus bv. 9 str. C68]
gi|260916812|gb|EEX83673.1| argininosuccinate synthase [Brucella abortus bv. 3 str. Tulya]
gi|260919888|gb|EEX86541.1| argininosuccinate synthase [Brucella ceti B1/94]
gi|260923166|gb|EEX89734.1| argininosuccinate synthase [Brucella ceti M13/05/1]
gi|261293766|gb|EEX97262.1| argininosuccinate synthase [Brucella ceti M644/93/1]
gi|261295956|gb|EEX99452.1| argininosuccinate synthase [Brucella pinnipedialis B2/94]
gi|261300171|gb|EEY03668.1| argininosuccinate synthase [Brucella neotomae 5K33]
gi|261303734|gb|EEY07231.1| argininosuccinate synthase [Brucella pinnipedialis M163/99/10]
gi|261741153|gb|EEY29079.1| argininosuccinate synthase [Brucella suis bv. 5 str. 513]
gi|261745716|gb|EEY33642.1| argininosuccinate synthase [Brucella suis bv. 3 str. 686]
gi|262551734|gb|EEZ07724.1| argininosuccinate synthase [Brucella ceti M490/95/1]
gi|262765001|gb|EEZ10922.1| argininosuccinate synthase [Brucella melitensis bv. 3 str. Ether]
gi|263003346|gb|EEZ15639.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. Rev.1]
gi|263095329|gb|EEZ18956.1| argininosuccinate synthase [Brucella melitensis bv. 2 str. 63/9]
gi|264660001|gb|EEZ30262.1| argininosuccinate synthase [Brucella pinnipedialis M292/94/1]
gi|264661846|gb|EEZ32107.1| argininosuccinate synthase [Brucella sp. 83/13]
gi|294820068|gb|EFG37067.1| argininosuccinate synthase [Brucella sp. NVSL 07-0026]
gi|297174646|gb|EFH33993.1| argininosuccinate synthase [Brucella abortus bv. 5 str. B3196]
gi|306273185|gb|EFM55076.1| argininosuccinate synthase [Brucella sp. BO1]
gi|306287265|gb|EFM58753.1| argininosuccinate synthase [Brucella sp. BO2]
gi|306406021|gb|EFM62272.1| argininosuccinate synthase [Brucella sp. NF 2653]
gi|326408087|gb|ADZ65152.1| Argininosuccinate synthase [Brucella melitensis M28]
gi|326537803|gb|ADZ86018.1| argininosuccinate synthase [Brucella melitensis M5-90]
Length = 406
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAEMLGIKEIF 64
>gi|7022010|dbj|BAA91462.1| unnamed protein product [Homo sapiens]
Length = 166
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|159185316|ref|NP_355604.2| argininosuccinate synthase [Agrobacterium tumefaciens str. C58]
gi|24211505|sp|Q8UC31|ASSY_AGRT5 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|159140573|gb|AAK88389.2| argininosuccinate synthase [Agrobacterium tumefaciens str. C58]
Length = 407
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAEMLGIKEIF 64
>gi|23500989|ref|NP_697116.1| argininosuccinate synthase [Brucella suis 1330]
gi|30172863|sp|Q8G376|ASSY_BRUSU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|23346849|gb|AAN29031.1| argininosuccinate synthase [Brucella suis 1330]
Length = 406
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAEMLGIKEIF 64
>gi|326381604|ref|ZP_08203298.1| sulfate adenylyltransferase subunit 2 [Gordonia neofelifaecis
NRRL B-59395]
gi|326199851|gb|EGD57031.1| sulfate adenylyltransferase subunit 2 [Gordonia neofelifaecis
NRRL B-59395]
Length = 313
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
++LFSGG+DS+ L AL F
Sbjct: 41 ERPVILFSGGKDSTLLLHLALKAF 64
>gi|315638547|ref|ZP_07893723.1| argininosuccinate synthase [Campylobacter upsaliensis JV21]
gi|315481391|gb|EFU72019.1| argininosuccinate synthase [Campylobacter upsaliensis JV21]
Length = 419
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 15 FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE---LMPKWKDS 70
+SGG D+S L W D + V T + D GQ ++E + I E + KD
Sbjct: 25 YSGGLDTSIILKWLQDEYGCEVVTFTADIGQGEELEPARLKALSLGIKEENIFIKDLKDE 84
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMK 97
+D++ P+ I ++
Sbjct: 85 FVKDYVFPMFRANAIYEGEYLLGTSIA 111
>gi|257892743|ref|ZP_05672396.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,231,408]
gi|257829122|gb|EEV55729.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,231,408]
Length = 373
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS ++ V +
Sbjct: 1 MTD--NSQTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|255311088|ref|ZP_05353658.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis 6276]
Length = 358
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETL 38
+ ++ SGG DSS + V L
Sbjct: 1 MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGL 33
>gi|281420944|ref|ZP_06251943.1| argininosuccinate synthase [Prevotella copri DSM 18205]
gi|281404862|gb|EFB35542.1| argininosuccinate synthase [Prevotella copri DSM 18205]
Length = 400
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ FSGG D+S + V + G + +L+ K
Sbjct: 3 NKKVVVAFSGGLDTSYTVMKLTQDGWDVYAACANTGGFSSEQLKTNEENAYK-------- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAAT-LAYR 125
LG + L + + SL + + NN P + R IF A A
Sbjct: 55 ---LGAKAYVTLDVTHEYYEKSLKYMIFGNVLRNNCYPISVSSER--IFQAIAIARYAKE 109
Query: 126 LGITNIVIG 134
+G I G
Sbjct: 110 IGADAIAHG 118
>gi|166154498|ref|YP_001654616.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis 434/Bu]
gi|166155373|ref|YP_001653628.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|301335758|ref|ZP_07224002.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis L2tet1]
gi|205813555|sp|B0B7K3|MNMA_CHLT2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205813565|sp|B0BBR8|MNMA_CHLTB RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|165930486|emb|CAP03979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis 434/Bu]
gi|165931361|emb|CAP06933.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis L2b/UCH-1/proctitis]
Length = 358
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETL 38
+ ++ SGG DSS + V L
Sbjct: 1 MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGL 33
>gi|154316510|ref|XP_001557576.1| asparagine synthetase [Botryotinia fuckeliana B05.10]
gi|150845986|gb|EDN21179.1| asparagine synthetase [Botryotinia fuckeliana B05.10]
Length = 581
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DSS + A R+ +
Sbjct: 233 VLLSGGLDSSLVAAIAQRESLRLRAAT 259
>gi|238796754|ref|ZP_04640260.1| NAD+ synthase [Yersinia mollaretii ATCC 43969]
gi|238719485|gb|EEQ11295.1| NAD+ synthase [Yersinia mollaretii ATCC 43969]
Length = 540
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 11 ALLLFSGGQDSSTCLSWALDR--FDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ L+ A+D D+V+ L F Y + + K+ E++
Sbjct: 283 AVLGLSGGIDSALTLAIAVDALGKDKVQALMMPFRY------TADISIADAKEEAEILGI 336
Query: 67 WKDSLGEDHILPLAILGDIS 86
D L + + A +G ++
Sbjct: 337 EFDVLSIEPMFD-AFMGQLA 355
>gi|323694000|ref|ZP_08108184.1| asparagine synthase [Clostridium symbiosum WAL-14673]
gi|323501936|gb|EGB17814.1| asparagine synthase [Clostridium symbiosum WAL-14673]
Length = 144
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCV 56
M D K P + FSGG DSS L A D + V ++F+ +L+ V
Sbjct: 16 MMDEYGKGPVCIA-FSGGVDSSLLLKIACDNGRKYKTPVYAVTFNTMLHPACDLDTAKKV 74
Query: 57 RKKIVE 62
+++
Sbjct: 75 ARELGA 80
>gi|322374000|ref|ZP_08048534.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. C150]
gi|321276966|gb|EFX54037.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus sp. C150]
Length = 373
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|320547685|ref|ZP_08041970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus equinus ATCC 9812]
gi|320447760|gb|EFW88518.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus equinus ATCC 9812]
Length = 373
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|294789627|ref|ZP_06754861.1| tRNA(Ile)-lysidine synthase [Simonsiella muelleri ATCC 29453]
gi|294482428|gb|EFG30121.1| tRNA(Ile)-lysidine synthase [Simonsiella muelleri ATCC 29453]
Length = 427
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 9/74 (12%)
Query: 7 KAPSALLLFSGGQDSST---CLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ ++ FSGG DS L+ A ++ + + + + ++
Sbjct: 13 QNQRIIVGFSGGLDSVVLLHLLAMARTQYVFDLSAIHV-----HHNLSQNADKWADFCLD 67
Query: 63 LMPKWKDSLGEDHI 76
WK L ++
Sbjct: 68 FCENWKIPLTIKYV 81
>gi|288870472|ref|ZP_06114208.2| asparagine synthase 3 [Clostridium hathewayi DSM 13479]
gi|288867070|gb|EFC99368.1| asparagine synthase 3 [Clostridium hathewayi DSM 13479]
Length = 373
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Query: 15 FSGGQDS----STCLSWALDRFDRVETLSFD 41
SGG DS + C + + R+ T SFD
Sbjct: 273 LSGGVDSSLVSAVCAAELKKQGKRLTTFSFD 303
>gi|238059534|ref|ZP_04604243.1| sulfate adenylyltransferase subunit 2 [Micromonospora sp. ATCC
39149]
gi|237881345|gb|EEP70173.1| sulfate adenylyltransferase subunit 2 [Micromonospora sp. ATCC
39149]
Length = 304
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF 32
M +++ + +LLFSGG+DS L A F
Sbjct: 24 MREVVAEMERPVLLFSGGKDSIVMLRLAQKAF 55
>gi|237802710|ref|YP_002887904.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis
B/Jali20/OT]
gi|231273944|emb|CAX10736.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlamydia trachomatis B/Jali20/OT]
Length = 358
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETL 38
+ ++ SGG DSS + V L
Sbjct: 1 MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGL 33
>gi|261366340|ref|ZP_05979223.1| asparagine synthase [Subdoligranulum variabile DSM 15176]
gi|282571943|gb|EFB77478.1| asparagine synthase [Subdoligranulum variabile DSM 15176]
Length = 615
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 17/48 (35%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DSS A + ++ S Y + EL + +
Sbjct: 260 CFLSGGVDSSLTACKAARQQSHLQCFSVGYAEEAYSELPAARQAAEAL 307
>gi|116628661|ref|YP_821280.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus thermophilus
LMD-9]
gi|122266745|sp|Q03I88|MNMA_STRTD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|116101938|gb|ABJ67084.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus thermophilus LMD-9]
Length = 373
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D K ++ SGG DSS ++ V +
Sbjct: 1 MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|325577993|ref|ZP_08148187.1| argininosuccinate synthase [Haemophilus parainfluenzae ATCC 33392]
gi|325160226|gb|EGC72354.1| argininosuccinate synthase [Haemophilus parainfluenzae ATCC 33392]
Length = 444
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + FSGG D+S L W + + + GQ + + + KK +E
Sbjct: 9 LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQ---PDEDDYNAIPKKAMEYG 65
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
+ + L + I + + N P
Sbjct: 66 AENARLVDCRAQLAHEGIAAIQCGAFHISTGGATYFNTTP 105
>gi|308185759|ref|YP_003929890.1| cell cycle protein [Pantoea vagans C9-1]
gi|308056269|gb|ADO08441.1| cell cycle protein [Pantoea vagans C9-1]
Length = 466
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 12/69 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
D + + +AL++ FSGG DS+ L L + Q++ L V +
Sbjct: 35 DALLQPDAALVVAFSGGLDSTVLLHQLL-----------GWQQQHPQSHLRALHVHHGLS 83
Query: 62 ELMPKWKDS 70
W
Sbjct: 84 PNADAWAAH 92
>gi|301156545|emb|CBW16016.1| argininosuccinate synthetase [Haemophilus parainfluenzae T3T1]
Length = 444
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K + FSGG D+S L W + + + GQ + + + KK +E
Sbjct: 9 LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQ---PDEDDYNAIPKKAMEYG 65
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
+ + L + I + + N P
Sbjct: 66 AENARLVDCRAQLAHEGIAAIQCGAFHISTGGATYFNTTP 105
>gi|295402654|ref|ZP_06812599.1| GMP synthase, large subunit [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112492|ref|YP_003990808.1| GMP synthase, large subunit [Geobacillus sp. Y4.1MC1]
gi|294975311|gb|EFG50944.1| GMP synthase, large subunit [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217593|gb|ADP76197.1| GMP synthase, large subunit [Geobacillus sp. Y4.1MC1]
Length = 512
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 66/188 (35%), Gaps = 24/188 (12%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
L SGG DSS D++ + D+G +RK E + K
Sbjct: 218 KKVLCALSGGVDSSVAAVLVHRAIGDQLTCIFVDHG-----------LLRKGEAESVMKT 266
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+ +++ + + S L + + + + N F+ +F A A G
Sbjct: 267 FREGFQMNVIKVDA-KERFLSKLKGVIDPEQKRKIIGNEFI----YVFDDEA---AKLEG 318
Query: 128 ITNIVIGVCETD--YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
I +V G TD SG TI++ L + + PL L K E L
Sbjct: 319 IEFLVQGTLYTDIIESG--TATAQTIKSHHNVGGLPEDMKFKLIEPLKTLFKDEVRALGT 376
Query: 186 DIGGQDLV 193
++G D +
Sbjct: 377 ELGLPDEI 384
>gi|227874307|ref|ZP_03992494.1| argininosuccinate synthase [Oribacterium sinus F0268]
gi|227839858|gb|EEJ50301.1| argininosuccinate synthase [Oribacterium sinus F0268]
Length = 414
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKV-ELECRLCVRKKIVELM 64
K +L +SGG D++ + W + +V + D GQ ++ +L R + +
Sbjct: 11 KGEKIILAYSGGLDTTAIIPWLKENFGYKVVCVCVDVGQEEELSDLPERAKLSGAEKLYI 70
Query: 65 PKWKDSLGEDHILP 78
+D E+++LP
Sbjct: 71 EHIQDEFCEEYVLP 84
>gi|222529421|ref|YP_002573303.1| GMP synthase [Caldicellulosiruptor bescii DSM 6725]
gi|259647755|sp|B9MS76|GUAA_ANATD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|222456268|gb|ACM60530.1| GMP synthase, large subunit [Caldicellulosiruptor bescii DSM 6725]
Length = 511
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
+ SGG DSS + + D+G K E E + V K
Sbjct: 215 NQKVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEAEEVVSVFK 266
>gi|146319824|ref|YP_001199536.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis 05ZYH33]
gi|253752800|ref|YP_003025941.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus suis SC84]
gi|253754625|ref|YP_003027766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus suis P1/7]
gi|253756558|ref|YP_003029698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus suis BM407]
gi|205828994|sp|A4VYE7|MNMA_STRSY RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|205829102|sp|A4W4N7|MNMA_STRS2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|145690630|gb|ABP91136.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
methyltransferase, contains the PP-loop ATPase domain
[Streptococcus suis 05ZYH33]
gi|251817089|emb|CAZ52741.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus suis SC84]
gi|251819022|emb|CAZ56869.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus suis BM407]
gi|251820871|emb|CAR47637.1| putative tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus suis P1/7]
Length = 374
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS ++ V +
Sbjct: 5 NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 37
>gi|124009905|ref|ZP_01694571.1| asparagine synthase (glutamine-hydrolyzing) [Microscilla marina
ATCC 23134]
gi|123984056|gb|EAY24429.1| asparagine synthase (glutamine-hydrolyzing) [Microscilla marina
ATCC 23134]
Length = 636
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDY 42
SGG DSS + A D++ T S Y
Sbjct: 266 LSGGIDSSVIATLAARHTDQLHTFSIGY 293
>gi|86134272|ref|ZP_01052854.1| sulfate adenylyltransferase subunit 2 [Polaribacter sp. MED152]
gi|85821135|gb|EAQ42282.1| sulfate adenylyltransferase subunit 2 [Polaribacter sp. MED152]
Length = 311
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKI 60
+LLFSGG+DS T + A F + L D G +E R + K++
Sbjct: 37 EKPVLLFSGGKDSITLVRLAQKAFYPAKIPFPLLHIDTGHNFPETIEFRDRLAKEL 92
>gi|257886541|ref|ZP_05666194.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,141,733]
gi|257822595|gb|EEV49527.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium 1,141,733]
Length = 373
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS ++ V +
Sbjct: 1 MTD--NSQTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|257876279|ref|ZP_05655932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus casseliflavus EC20]
gi|257810445|gb|EEV39265.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus casseliflavus EC20]
Length = 372
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS ++ V +
Sbjct: 1 MSNENTRVVVGMSGGVDSSVTALLLKEQGYDVVGI 35
>gi|257866681|ref|ZP_05646334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus casseliflavus EC30]
gi|257872802|ref|ZP_05652455.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus casseliflavus EC10]
gi|257800639|gb|EEV29667.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus casseliflavus EC30]
gi|257806966|gb|EEV35788.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus casseliflavus EC10]
Length = 372
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS ++ V +
Sbjct: 1 MSNENTRVVVGMSGGVDSSVTALLLKEQGYDVVGI 35
>gi|302560983|ref|ZP_07313325.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces
griseoflavus Tu4000]
gi|302478601|gb|EFL41694.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces
griseoflavus Tu4000]
Length = 586
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 9/109 (8%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDR--FDRVETLSF--DYGQRNKV----ELECRL 54
+ K ++++ SGG DS+ + A D + V +S Y + EL R
Sbjct: 320 VAKNGFRSVVIGLSGGIDSALVAALACDAVGAENVYGVSMPSKYSSEHSKDDAAELARRT 379
Query: 55 CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
+ + V + P + +G + LA S T +A+ Q+ ++
Sbjct: 380 GLNYRTVAIEPMFDAYMGALGLTGLAEENLQSRLRGTLLMAISNQEGHI 428
>gi|227552294|ref|ZP_03982343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX1330]
gi|257895129|ref|ZP_05674782.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium Com12]
gi|293377883|ref|ZP_06624064.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium PC4.1]
gi|227178565|gb|EEI59537.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium TX1330]
gi|257831694|gb|EEV58115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium Com12]
gi|292643430|gb|EFF61559.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium PC4.1]
Length = 373
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS ++ V +
Sbjct: 1 MTD--NSQTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|295839307|ref|ZP_06826240.1| glutamine-dependent NAD+ synthetase [Streptomyces sp. SPB74]
gi|197696920|gb|EDY43853.1| glutamine-dependent NAD+ synthetase [Streptomyces sp. SPB74]
Length = 586
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSF--DYGQRNKVELECRLCVR 57
+ L+ SGG DS+ C + A D + V +S Y + + L R
Sbjct: 326 RTVLIGLSGGIDSALCAAIACDAIGAEHVHGVSMPSKYSSEHSKDDAADLAAR 378
>gi|182682123|ref|YP_001830283.1| tRNA(Ile)-lysidine synthetase [Xylella fastidiosa M23]
gi|182632233|gb|ACB93009.1| tRNA(Ile)-lysidine synthetase [Xylella fastidiosa M23]
gi|307578388|gb|ADN62357.1| cell cycle protein [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 435
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 8/83 (9%)
Query: 1 MNDIIKKAPS----ALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELEC 52
M+ + P L+ FSGG DS+ L R +E + +G +
Sbjct: 1 MSSPFPRIPDPGVPVLVAFSGGLDSTVLLHCLASQPTQRIHGLEAIHIHHGLNENADAWT 60
Query: 53 RLCVRKKIVELMPKWKDSLGEDH 75
C + + H
Sbjct: 61 AHCAAFCTQHDIRLHIARVHVSH 83
>gi|71898703|ref|ZP_00680872.1| PP-loop [Xylella fastidiosa Ann-1]
gi|71731468|gb|EAO33530.1| PP-loop [Xylella fastidiosa Ann-1]
Length = 435
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 8/83 (9%)
Query: 1 MNDIIKKAPS----ALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELEC 52
M+ + P L+ FSGG DS+ L R +E + +G +
Sbjct: 1 MSSPFPRIPDPGVPVLVAFSGGLDSTVLLHCLASQPTQRIHGLEAIHIHHGLNENADAWT 60
Query: 53 RLCVRKKIVELMPKWKDSLGEDH 75
C + + H
Sbjct: 61 AHCAAFCTQHDIRLHIARVHVSH 83
>gi|319936822|ref|ZP_08011234.1| argininosuccinate synthase [Coprobacillus sp. 29_1]
gi|319808090|gb|EFW04662.1| argininosuccinate synthase [Coprobacillus sp. 29_1]
Length = 406
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVEL 63
K+ +L +SGG D+S +SW + + V ++ D GQ +++E LE +
Sbjct: 4 KQYKKVVLAYSGGLDTSIIISWLKENYGCEVIAVAGDVGQADELEGLEAKALATGASKYY 63
Query: 64 MPKWKDSLGEDHILP 78
+ K+ D I P
Sbjct: 64 VADCKEEFVNDFIFP 78
>gi|308067478|ref|YP_003869083.1| NH(3)-dependent NAD(+) synthetase [Paenibacillus polymyxa E681]
gi|305856757|gb|ADM68545.1| NH(3)-dependent NAD(+) synthetase [Paenibacillus polymyxa E681]
Length = 269
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 10/56 (17%)
Query: 12 LLLFSGGQDSSTCLSWAL--------DRFDRVETLSFD--YGQRNKVELECRLCVR 57
L+ SGG DS+ + ++ D +TL YGQ+ +E +
Sbjct: 43 LIAISGGIDSAVAAALCKRATDELTQEQGDEYKTLGVFQPYGQQEDIEHSYAVAKA 98
>gi|298243234|ref|ZP_06967041.1| argininosuccinate synthase [Ktedonobacter racemifer DSM 44963]
gi|297556288|gb|EFH90152.1| argininosuccinate synthase [Ktedonobacter racemifer DSM 44963]
Length = 419
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ +L +SGG D+S + W ++++ V L+ D G N+ +L +KI +
Sbjct: 3 TVVLAYSGGLDTSVAIRWIKEKYNLDVIALTIDVG--NERDLSAIAERARKIGAVKALVV 60
Query: 69 DS 70
D
Sbjct: 61 DG 62
>gi|293367873|ref|ZP_06614517.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291318008|gb|EFE58410.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 225
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 24/137 (17%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
++K A +LF+GG+DSS + V ++ + G K EL ++ EL+
Sbjct: 1 MEKEKVA-VLFTGGRDSSLVACLESLKDKEVHLITCNSGIGIKSELSE-----IRVKELI 54
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL-------V 117
++ +++ ILP L S KN+ + + + N++ L
Sbjct: 55 ERFPNNIVGRTILPTYGL---FRSIAIKNLELDFKKWGI--------NLVLLGDKLAIHA 103
Query: 118 FAATLAYRLGITNIVIG 134
A GI IV G
Sbjct: 104 AATVYCLENGIKKIVDG 120
>gi|257897740|ref|ZP_05677393.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium Com15]
gi|257835652|gb|EEV60726.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus faecium Com15]
Length = 373
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS ++ V +
Sbjct: 1 MTD--NSQTRVVVGMSGGVDSSVTALLLKEQGYDVIGI 36
>gi|227502742|ref|ZP_03932791.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Corynebacterium accolens ATCC 49725]
gi|227076472|gb|EEI14435.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Corynebacterium accolens ATCC 49725]
Length = 511
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 10 SALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYG 43
A+ SGG DS+ + DR+ + D+G
Sbjct: 209 RAICALSGGVDSAVAAALVQGAIGDRLTCVFVDHG 243
>gi|149204363|ref|ZP_01881330.1| argininosuccinate synthase [Roseovarius sp. TM1035]
gi|149142248|gb|EDM30295.1| argininosuccinate synthase [Roseovarius sp. TM1035]
Length = 408
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK 58
+ +L +SGG D+S L W + V T + D GQ EL+ +
Sbjct: 1 MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQ--GEELDPARQKAE 53
>gi|119508976|ref|ZP_01628128.1| asparagine synthase B [Nodularia spumigena CCY9414]
gi|119466505|gb|EAW47390.1| asparagine synthase B [Nodularia spumigena CCY9414]
Length = 496
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 17/135 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ SGG DSS + + SF G N +L+ V + + + ++ +
Sbjct: 224 VFLSGGLDSSIIAALMRQHIPNLH--SFSVGLPNSPDLKAARLVAEHLGTIHHEYVYTEA 281
Query: 73 EDHIL--PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
E + + + +L ++ + L + +V + L G
Sbjct: 282 EMSAVLPDVIYYLESFDPALVRSAIPCYIVSQLASKYV----KVILS-------GEGADE 330
Query: 131 IVIGVCETDYSGYPD 145
+ G ++ Y D
Sbjct: 331 LFAGYSY--FADYDD 343
>gi|118580257|ref|YP_901507.1| tRNA-specific 2-thiouridylase MnmA [Pelobacter propionicus DSM
2379]
gi|205816920|sp|A1AQ29|MNMA_PELPD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|118502967|gb|ABK99449.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pelobacter propionicus DSM 2379]
Length = 355
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DSS + ++ + ++
Sbjct: 5 VAMSGGVDSSVAAALLKEQGHEIIGIT 31
>gi|325567216|ref|ZP_08143883.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus casseliflavus ATCC 12755]
gi|325158649|gb|EGC70795.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus casseliflavus ATCC 12755]
Length = 372
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS ++ V +
Sbjct: 1 MSNENTRVVVGMSGGVDSSVTALLLKEQGYDVVGI 35
>gi|312792431|ref|YP_004025354.1| PP-loop domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179571|gb|ADQ39741.1| PP-loop domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 303
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + K L++ SGG+DS V + + G
Sbjct: 41 HRMFDKEDKVLVVISGGKDSMALWHILASEGYNVTGMYINLG 82
>gi|302865260|ref|YP_003833897.1| sulfate adenylyltransferase small subunit [Micromonospora
aurantiaca ATCC 27029]
gi|315501804|ref|YP_004080691.1| sulfate adenylyltransferase, small subunit [Micromonospora sp.
L5]
gi|302568119|gb|ADL44321.1| sulfate adenylyltransferase, small subunit [Micromonospora
aurantiaca ATCC 27029]
gi|315408423|gb|ADU06540.1| sulfate adenylyltransferase, small subunit [Micromonospora sp.
L5]
Length = 303
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF 32
M +++ + +LLFSGG+DS L A F
Sbjct: 23 MREVVAEMERPVLLFSGGKDSIVMLRLAQKAF 54
>gi|257870651|ref|ZP_05650304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus gallinarum EG2]
gi|257804815|gb|EEV33637.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Enterococcus gallinarum EG2]
Length = 372
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS ++ V +
Sbjct: 1 MSNENTRVVVGMSGGVDSSVTALLLKEQGYDVVGI 35
>gi|255535022|ref|YP_003095393.1| Argininosuccinate synthase [Flavobacteriaceae bacterium 3519-10]
gi|255341218|gb|ACU07331.1| Argininosuccinate synthase [Flavobacteriaceae bacterium 3519-10]
Length = 396
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 14/128 (10%)
Query: 9 PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D S + + + V + + G ++ E++ ++
Sbjct: 2 EKVVLAYSGGLDTSFCAVYLSKVKQLEVHAVMVNLGGFSEEEIKKTEERAYQL------- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
+ H++ + +++N P + R +F A A +
Sbjct: 55 --GVKSFHVID-DAQNYYDNCIKYLIFGNVLKNNTYPLSVSSER--VFQATAIAHYAKEI 109
Query: 127 GITNIVIG 134
G I G
Sbjct: 110 GAKAIAHG 117
>gi|160880070|ref|YP_001559038.1| argininosuccinate synthase [Clostridium phytofermentans ISDg]
gi|187470628|sp|A9KHL4|ASSY_CLOPH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|160428736|gb|ABX42299.1| Argininosuccinate synthase [Clostridium phytofermentans ISDg]
Length = 407
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + + V D GQ N+++ LE R + +
Sbjct: 1 MKEKVILAYSGGLDTTAIIPWLKENYDYDVVCCCIDVGQGNELDGLEERAKLSGATKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +++++P G + + +M
Sbjct: 61 EHVTDEFVDEYVMPCVKAGAVYENKYLLGTSMA 93
>gi|329768495|ref|ZP_08259984.1| GMP synthase [Gemella haemolysans M341]
gi|328836723|gb|EGF86378.1| GMP synthase [Gemella haemolysans M341]
Length = 514
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELEC 52
L SGG DSS + D++ + D+G K E E
Sbjct: 216 QKVLCALSGGVDSSVVAALLDKAIGDQLICMFIDHGLLRKGEAEA 260
>gi|296446657|ref|ZP_06888598.1| asparagine synthase [Methylosinus trichosporium OB3b]
gi|296255885|gb|EFH02971.1| asparagine synthase [Methylosinus trichosporium OB3b]
Length = 562
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
SGG DS+ A + V ++ DY R
Sbjct: 190 CFLSGGTDSAIIAFLAREAGMNVVGVTADYAPR 222
>gi|241889310|ref|ZP_04776613.1| GMP synthase [Gemella haemolysans ATCC 10379]
gi|241864147|gb|EER68526.1| GMP synthase [Gemella haemolysans ATCC 10379]
Length = 461
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELEC 52
L SGG DSS + D++ + D+G K E E
Sbjct: 163 QKVLCALSGGVDSSVVAALLDKAIGDQLICMFIDHGLLRKGEAEA 207
>gi|222086207|ref|YP_002544739.1| NAD(+) synthase (glutamine-hydrolysing) protein [Agrobacterium
radiobacter K84]
gi|221723655|gb|ACM26811.1| NAD(+) synthase (glutamine-hydrolysing) protein [Agrobacterium
radiobacter K84]
Length = 559
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVE---LECRLCVR 57
+ K +++L SGG DS+ C + A+D +RV T+ Y R E + C +
Sbjct: 287 VNKNGFKSVVLGLSGGIDSAICAAIAVDALGEERVRTVMLPY--RYTSEDSLKDAADCAK 344
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
+ LA L + + S +T+
Sbjct: 345 ALGCRYDIVPIEEPVTGFTSALADLFEGTESGITEE 380
>gi|148269863|ref|YP_001244323.1| PP-loop domain-containing protein [Thermotoga petrophila RKU-1]
gi|147735407|gb|ABQ46747.1| PP-loop domain protein [Thermotoga petrophila RKU-1]
Length = 304
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 46/140 (32%), Gaps = 18/140 (12%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + L+ SGG+DS + V+ L G + + +K E
Sbjct: 42 KMFGRNSKILIAVSGGKDSVSLWHMLKKLGYEVDALFIRAG---------KSGMVQKAQE 92
Query: 63 LMPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ K + L HI+ S+ ++ ++ ++ R +
Sbjct: 93 IVEKNAELLNTKLHIVDATEYFG-GLSTQEISIMLRRPVCSICGVV---RRYLM----NK 144
Query: 122 LAYRLGITNIVIGVCETDYS 141
AY G +V G D +
Sbjct: 145 FAYENGYDVVVTGHNLNDEA 164
>gi|15642970|ref|NP_228012.1| hypothetical protein TM0197 [Thermotoga maritima MSB8]
gi|4980693|gb|AAD35289.1|AE001704_10 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 304
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 46/140 (32%), Gaps = 18/140 (12%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + L+ SGG+DS + V+ L G + + +K E
Sbjct: 42 KMFGRNSKILIAVSGGKDSVSLWHMLKKLGYEVDALFIRAG---------KSGMVQKAQE 92
Query: 63 LMPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
++ K + L HI+ S+ ++ ++ ++ R +
Sbjct: 93 IVEKNAELLNTKLHIVDATEYFG-GLSTQEISIMLRRPVCSICGVV---RRYLM----NK 144
Query: 122 LAYRLGITNIVIGVCETDYS 141
AY G +V G D +
Sbjct: 145 FAYENGYDVVVTGHNLNDEA 164
>gi|254480686|ref|ZP_05093933.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[marine gamma proteobacterium HTCC2148]
gi|214039269|gb|EEB79929.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[marine gamma proteobacterium HTCC2148]
Length = 363
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 44/132 (33%), Gaps = 15/132 (11%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPK 66
+ ++ SGG DSS ++ VE L +N E + C K+
Sbjct: 6 SKKVIVGMSGGVDSSVSALLLKEQGYAVEGLFM----KNWEEDDGTEYCTAKEDFADAQA 61
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATL 122
D LG L A ++ ++ + + PN P R I F F
Sbjct: 62 VADKLGIK--LHGANFAAEYWDNVFEHFLDEYRAGRTPN---PDILCNREIKFKAF-LDY 115
Query: 123 AYRLGITNIVIG 134
A LG I G
Sbjct: 116 ALTLGADLIATG 127
>gi|254473458|ref|ZP_05086855.1| glutamine-dependent NAD(+) synthetase [Pseudovibrio sp. JE062]
gi|211957574|gb|EEA92777.1| glutamine-dependent NAD(+) synthetase [Pseudovibrio sp. JE062]
Length = 555
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 12 LLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
++L SGG DS+ C + A+D +RV + Y R E +
Sbjct: 290 VVLGLSGGIDSAICAAMAVDALGAERVHCIMLPY--RYTSEESIKDAKA 336
>gi|170747043|ref|YP_001753303.1| argininosuccinate synthase [Methylobacterium radiotolerans JCM
2831]
gi|170653565|gb|ACB22620.1| Argininosuccinate synthase [Methylobacterium radiotolerans JCM
2831]
Length = 412
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLC 55
M+ K ++L +SGG D+S L W + V T + D GQ ++E R
Sbjct: 1 MSVPAKSPVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEPARRKA 57
>gi|126465693|ref|YP_001040802.1| phosphoadenosine phosphosulfate reductase [Staphylothermus marinus
F1]
gi|126014516|gb|ABN69894.1| phosphoadenosine phosphosulfate reductase [Staphylothermus marinus
F1]
Length = 418
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDR 34
D + K L+ FSGG+DS L A +
Sbjct: 209 DSLGKPDIVLVSFSGGKDSLVVLHMAKMHYGE 240
>gi|323442047|gb|EGA99682.1| hypothetical protein SAO46_2006 [Staphylococcus aureus O46]
Length = 431
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEESRFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLN 85
>gi|323438741|gb|EGA96481.1| hypothetical protein SAO11_2434 [Staphylococcus aureus O11]
Length = 431
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ S G DS L L+ + L ++G R+ E R +
Sbjct: 15 VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEESRFLEAYCERHHIDLH 74
Query: 68 KDSLGEDHILP 78
L H L
Sbjct: 75 IKKLDLSHSLN 85
>gi|304415435|ref|ZP_07396084.1| putative NAD synthase [Candidatus Regiella insecticola LSR1]
gi|304282699|gb|EFL91213.1| putative NAD synthase [Candidatus Regiella insecticola LSR1]
Length = 546
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 16/59 (27%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETL----------SFDY----GQRNKVELE 51
+A+L SGG DS+ L+ A+D V+ L S +Y Q+ K+EL+
Sbjct: 282 KTAILGLSGGIDSALTLAIAVDALTAKNVQALMMPFRYTSEESINYARQQAQKQKIELK 340
>gi|260943125|ref|XP_002615861.1| hypothetical protein CLUG_04743 [Clavispora lusitaniae ATCC
42720]
gi|238851151|gb|EEQ40615.1| hypothetical protein CLUG_04743 [Clavispora lusitaniae ATCC
42720]
Length = 463
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 11/71 (15%)
Query: 12 LLLFSGGQDS---STCLSWALDRFD---RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
L+ SGG DS + L +D + T++ D+G R LE ++ ++
Sbjct: 24 LVALSGGVDSMCLTHLLLQYKKLYDPKLEIHTMTIDHGYRKMSSLE-----AHEVGRIVQ 78
Query: 66 KWKDSLGEDHI 76
W +
Sbjct: 79 SWGAHHYIHRL 89
>gi|226304109|ref|YP_002764067.1| tRNA(Ile)-lysidine synthase [Rhodococcus erythropolis PR4]
gi|259533748|sp|C0ZNS6|TILS_RHOE4 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|226183224|dbj|BAH31328.1| putative tRNA(Ile)-lysidine synthase [Rhodococcus erythropolis PR4]
Length = 325
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 6/101 (5%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+ ++ SGG DS + A+ D V+ L D ++++ V + +
Sbjct: 24 EPRRRVVVALSGGADSLALTAAAVAETDSVDALIVD----HRLQ-PGSDAVARSAADQAL 78
Query: 66 KWKDSLGEDHILPLAILGDISHSSL-TKNVAMKIQDNNLPN 105
+ +A G + ++ + A++ +LP
Sbjct: 79 ALGCRTATVLTVDVAEGGSLEAAAREARYSALRDARTDLPV 119
>gi|209522863|ref|ZP_03271421.1| Asparagine synthase (glutamine-hydrolyzing) [Arthrospira maxima
CS-328]
gi|209496912|gb|EDZ97209.1| Asparagine synthase (glutamine-hydrolyzing) [Arthrospira maxima
CS-328]
Length = 523
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
+++SGG DSS LS A+ +V +
Sbjct: 225 VIYSGGLDSSIVLSQAIQNHPQVTAFTV 252
>gi|169629047|ref|YP_001702696.1| asparagine synthetase AsnB [Mycobacterium abscessus ATCC 19977]
gi|169241014|emb|CAM62042.1| Probable asparagine synthetase AsnB [Mycobacterium abscessus]
Length = 646
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 22/48 (45%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ ++ T + + ++ E++ + + I
Sbjct: 274 LSGGIDSTAIAALAIRHNPKLITFTTGFERQGYSEVDVAVESAQAIGA 321
>gi|150401410|ref|YP_001325176.1| adenylosuccinate lyase [Methanococcus aeolicus Nankai-3]
gi|150014113|gb|ABR56564.1| adenylosuccinate lyase [Methanococcus aeolicus Nankai-3]
Length = 448
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 8/108 (7%)
Query: 35 VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
V + F YG + E+ +K++E+ + GE I+P+ +I+ + TK V
Sbjct: 3 VHPIDFRYGSKEMKEVWEEETKLQKMLEVEAAIAMAQGELGIIPMEAAEEINRKASTKFV 62
Query: 95 AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR--LGI-TNIVIGVCETD 139
+++ T R+ I + A G I G D
Sbjct: 63 SLERAKEIEMET----RHDI-VSMVKAFAEVCDNGAGEYIHFGATSND 105
>gi|52081229|ref|YP_080020.1| tRNA-specific 2-thiouridylase MnmA [Bacillus licheniformis ATCC
14580]
gi|52786609|ref|YP_092438.1| tRNA-specific 2-thiouridylase MnmA [Bacillus licheniformis ATCC
14580]
gi|319644804|ref|ZP_07999037.1| tRNA-specific 2-thiouridylase mnmA [Bacillus sp. BT1B_CT2]
gi|73919897|sp|Q65GR9|MNMA_BACLD RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|52004440|gb|AAU24382.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
[Bacillus licheniformis ATCC 14580]
gi|52349111|gb|AAU41745.1| TrmU [Bacillus licheniformis ATCC 14580]
gi|317392613|gb|EFV73407.1| tRNA-specific 2-thiouridylase mnmA [Bacillus sp. BT1B_CT2]
Length = 372
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 5 IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ K P ++ SGG DSS ++ V +
Sbjct: 1 MAKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGI 37
>gi|319945971|ref|ZP_08020220.1| tRNA(Ile)-lysidine synthetase [Streptococcus australis ATCC 700641]
gi|319747779|gb|EFW00024.1| tRNA(Ile)-lysidine synthetase [Streptococcus australis ATCC 700641]
Length = 424
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 14/114 (12%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNK--------VELE 51
+ + LL SGG DS T L W + ++ QR + EL
Sbjct: 14 LFESHQKVLLALSGGVDSMTLLDWLYHYQHQLGIDLVLAHVNHHQRVEADQEERGIRELA 73
Query: 52 CRLCVRKKIVELMPKWKDSLGEDHILPL--AILGDISHSSLTKNVAMKIQDNNL 103
+ K+ + +S ++ + + S++ M Q +
Sbjct: 74 EAKHLPLKVAHFSGPFSESRARQFRYDFFEKVMKEEACSAIVTAHHMDDQAETI 127
>gi|325661920|ref|ZP_08150540.1| argininosuccinate synthase [Lachnospiraceae bacterium 4_1_37FAA]
gi|331085787|ref|ZP_08334870.1| argininosuccinate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325471772|gb|EGC74990.1| argininosuccinate synthase [Lachnospiraceae bacterium 4_1_37FAA]
gi|330406710|gb|EGG86215.1| argininosuccinate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 405
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + F V D GQ +++ LE R + +
Sbjct: 1 MKEKVILAYSGGLDTTAIIPWLKENFDYEVICCCIDCGQGEELDGLEERAKLSGASKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +D+I+P I + AM
Sbjct: 61 ENIVDEFCDDYIVPCVQANAIYENKYLLGTAMA 93
>gi|319650597|ref|ZP_08004737.1| hypothetical protein HMPREF1013_01342 [Bacillus sp. 2_A_57_CT2]
gi|317397778|gb|EFV78476.1| hypothetical protein HMPREF1013_01342 [Bacillus sp. 2_A_57_CT2]
Length = 274
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 12/93 (12%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
+I+ + ++ FSGG DS+ L ALD + V ++ D ELE + + I
Sbjct: 15 EILSEMERIIIAFSGGVDSTYLLKVALDTLGKENVLAITADSESFPPSELEETIRIANTI 74
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
I+ ++ L +S N
Sbjct: 75 DA----------PHQIIKMSELSIPGYSENDSN 97
>gi|225569024|ref|ZP_03778049.1| hypothetical protein CLOHYLEM_05103 [Clostridium hylemonae DSM
15053]
gi|225161823|gb|EEG74442.1| hypothetical protein CLOHYLEM_05103 [Clostridium hylemonae DSM
15053]
Length = 430
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + L ++ + ++G
Sbjct: 136 RKVLLALSGGVDSSVVAAMLLKAIGQQLTCVHVNHG 171
>gi|225024394|ref|ZP_03713586.1| hypothetical protein EIKCOROL_01269 [Eikenella corrodens ATCC
23834]
gi|224942775|gb|EEG23984.1| hypothetical protein EIKCOROL_01269 [Eikenella corrodens ATCC
23834]
Length = 368
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + ++ SGG DSS + +V +
Sbjct: 1 MPTPQNIIVGLSGGVDSSVTAHLLKQQGHQVRGV 34
>gi|182415078|ref|YP_001820144.1| asparagine synthase [Opitutus terrae PB90-1]
gi|177842292|gb|ACB76544.1| asparagine synthase [Opitutus terrae PB90-1]
Length = 596
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L SGG DS +A ++ + E L+F G+ ++ C V +++
Sbjct: 241 LLSGGLDSRLLAGFAAEQTRQPECLTF--GRPEDLDAACATAVAREL 285
>gi|145223535|ref|YP_001134213.1| asparagine synthase (glutamine-hydrolyzing) [Mycobacterium gilvum
PYR-GCK]
gi|145216021|gb|ABP45425.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium gilvum
PYR-GCK]
Length = 614
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 246 LSGGIDSTAIAALAMRHNPRLITFTTGFEREGFSEVDVAVASAEAIGA 293
>gi|320536235|ref|ZP_08036280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Treponema phagedenis F0421]
gi|320146893|gb|EFW38464.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Treponema phagedenis F0421]
Length = 359
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DS+ L++ V ++
Sbjct: 2 KILVGLSGGVDSAVAAKLLLEQGHEVSGVT 31
>gi|313206242|ref|YP_004045419.1| asparagine synthase (glutamine-hydrolyzing) [Riemerella
anatipestifer DSM 15868]
gi|312445558|gb|ADQ81913.1| asparagine synthase (glutamine-hydrolyzing) [Riemerella
anatipestifer DSM 15868]
Length = 629
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 15 FSGGQDS---STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SGG DS + CL A + ++ T S Y +++ E + V K+I ++
Sbjct: 268 LSGGVDSSIVTVCL--AEEMGQKINTFSIGYDKKSFDESDKSKIVAKQIGSTHHQF 321
>gi|295110441|emb|CBL24394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ruminococcus obeum A2-162]
Length = 373
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 11/33 (33%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
A++ SGG DSS + +
Sbjct: 1 MQKKAMIAMSGGVDSSVAAYLMVQNGYDCAGAT 33
>gi|225719718|gb|ACO15705.1| ATP-binding domain-containing protein 4 [Caligus clemensi]
Length = 248
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL 50
+ L SGG+DS + A + L Y Q +VE
Sbjct: 2 RVVALVSGGEDSCFNMIEATKHGHEIVALGNLYPQNIEVEE 42
>gi|254420612|ref|ZP_05034336.1| argininosuccinate synthase [Brevundimonas sp. BAL3]
gi|196186789|gb|EDX81765.1| argininosuccinate synthase [Brevundimonas sp. BAL3]
Length = 412
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVEL-ECRLCVR 57
M+ K ++L +SGG D+S L W + V T + D GQ EL R
Sbjct: 1 MSAPADKPVKKVVLAYSGGLDTSIILKWLQTEYNAEVVTFTADLGQ--GEELGPAREKAL 58
Query: 58 KKIVELMPKWKDSLGEDHILP 78
K ++ + D L E+ +
Sbjct: 59 KLGIKPENIFIDDLREEFVRD 79
>gi|254415451|ref|ZP_05029211.1| NAD synthase family [Microcoleus chthonoplastes PCC 7420]
gi|196177632|gb|EDX72636.1| NAD synthase family [Microcoleus chthonoplastes PCC 7420]
Length = 586
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 42/142 (29%), Gaps = 20/142 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++ SGG DSS + A + R L + E I + + K
Sbjct: 303 KRVVIGLSGGIDSSLVAALATEALGRENVLGVLMPSPHSSE--------HSINDALALAK 354
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR---NIIFLVFAATLAYR 125
+ + H LP+ L T + + + R N++ +A +
Sbjct: 355 NLGIKTHTLPIGELMQ--GYDQTLDPLFAGTEFGTAEENIQARIRGNLLM-----AIANK 407
Query: 126 LGITNIVIGVCETDYSGYPDCR 147
I G GY C
Sbjct: 408 FDYLLISTGNKSEMAVGY--CT 427
>gi|20094378|ref|NP_614225.1| argininosuccinate synthase [Methanopyrus kandleri AV19]
gi|24211501|sp|Q8TWU0|ASSY_METKA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|19887449|gb|AAM02155.1| Argininosuccinate synthase [Methanopyrus kandleri AV19]
Length = 394
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+L +SGG D+S C+ +R +D V T++ D GQ + E RK E
Sbjct: 3 RVVLAYSGGLDTSVCIELLRERYGYDEVITVTADVGQPEEELREAEEKARKLADEHF 59
>gi|332363617|gb|EGJ41398.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis SK1059]
Length = 425
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRV---ETL-SFDYGQRNKVELECRLCVRKKIV 61
+ L+ SGG DS T L +D + + ++ QR + E E + V KI
Sbjct: 17 QDHRKVLIAVSGGLDSMTLLQLLIDSQKELDIELAIAHVNHKQRPESEQEEKALV--KIA 74
Query: 62 ELMP 65
E +
Sbjct: 75 EQLG 78
>gi|332259082|ref|XP_003278617.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1
[Nomascus leucogenys]
Length = 421
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQAVRHVVCAVSGGVDSAVAALLLRRRGYQVTGV 34
>gi|315443881|ref|YP_004076760.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium sp.
Spyr1]
gi|315262184|gb|ADT98925.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium sp.
Spyr1]
Length = 636
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 268 LSGGIDSTAIAALAMRHNPRLITFTTGFEREGFSEVDVAVASAEAIGA 315
>gi|309811460|ref|ZP_07705245.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Dermacoccus sp. Ellin185]
gi|308434586|gb|EFP58433.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
[Dermacoccus sp. Ellin185]
Length = 525
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
A+ SGG DSS + DR+ + D+G
Sbjct: 222 RAICGLSGGVDSSVAAAMVQKAIGDRLTCVFVDHG 256
>gi|304317430|ref|YP_003852575.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778932|gb|ADL69491.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 372
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
K ++ SGG DSS ++ V +
Sbjct: 5 NKNIKVVVGMSGGVDSSVSALLLKEQGYDVVGI 37
>gi|257065335|ref|YP_003145007.1| argininosuccinate synthase [Slackia heliotrinireducens DSM 20476]
gi|256792988|gb|ACV23658.1| argininosuccinate synthase [Slackia heliotrinireducens DSM 20476]
Length = 404
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQ 44
+ + +L +SGG D+S L W ++ V + + GQ
Sbjct: 1 MSEKKKVVLAYSGGLDTSVVLKWLQVEKNLDVIAICGNVGQ 41
>gi|218296113|ref|ZP_03496882.1| Argininosuccinate synthase [Thermus aquaticus Y51MC23]
gi|218243490|gb|EED10019.1| Argininosuccinate synthase [Thermus aquaticus Y51MC23]
Length = 400
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV-ELMPKW 67
+L +SGG D+S L W + + V + D GQ +VE ++ +
Sbjct: 2 KIVLAYSGGLDTSIILKWLKETYGAEVIAFTADIGQGEEVEEAREKALKTGASKAIALDL 61
Query: 68 KDSLGEDHILPL 79
K+ D + P+
Sbjct: 62 KEEFVRDFVFPM 73
>gi|254429373|ref|ZP_05043080.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alcanivorax sp. DG881]
gi|196195542|gb|EDX90501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alcanivorax sp. DG881]
Length = 364
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 5 IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETL 38
++KAP ++ SGG DSS + +D +VE L
Sbjct: 1 MRKAPKDTRVIVGMSGGVDSSVAAARLIDAGYQVEGL 37
>gi|145508509|ref|XP_001440204.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407410|emb|CAK72807.1| unnamed protein product [Paramecium tetraurelia]
Length = 685
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 15 FSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
SGG DS+ A F + T+ DYG +KV + R V+
Sbjct: 346 LSGGVDSAATAISVFYMANKIFKTISTIDDDYGSHHKVLNQLRQIVQ 392
>gi|150398257|ref|YP_001328724.1| argininosuccinate synthase [Sinorhizobium medicae WSM419]
gi|166221022|sp|A6UE09|ASSY_SINMW RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|150029772|gb|ABR61889.1| Argininosuccinate synthase [Sinorhizobium medicae WSM419]
Length = 405
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL- 63
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAEMLGIKEIY 64
Query: 64 MPKWKDSLGEDHILPL 79
+ ++ +D + P+
Sbjct: 65 IEDVREEFVKDFVFPM 80
>gi|66546481|ref|XP_624200.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Apis mellifera]
Length = 395
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DS+ ++ V +
Sbjct: 3 KKIIVGISGGIDSAVTAFLLKNKGYDVTGV 32
>gi|14590200|ref|NP_142265.1| hypothetical protein PH0276 [Pyrococcus horikoshii OT3]
gi|3256665|dbj|BAA29348.1| 206aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 206
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
LFSGG+DSS V ++ +G
Sbjct: 8 LFSGGKDSSLAAWILRKLGYEVRLVTITFG 37
>gi|294501526|ref|YP_003565226.1| argininosuccinate synthase [Bacillus megaterium QM B1551]
gi|295706874|ref|YP_003599949.1| argininosuccinate synthase [Bacillus megaterium DSM 319]
gi|294351463|gb|ADE71792.1| argininosuccinate synthase [Bacillus megaterium QM B1551]
gi|294804533|gb|ADF41599.1| argininosuccinate synthase [Bacillus megaterium DSM 319]
Length = 402
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
P +L +SGG D+S + W ++ V D G
Sbjct: 2 SNPKVVLAYSGGLDTSVAIKWLQEKGYDVVACCLDVG 38
>gi|217077779|ref|YP_002335497.1| NAD synthetase [Thermosipho africanus TCF52B]
gi|217037634|gb|ACJ76156.1| glutamine-dependent NAD+ synthetase [Thermosipho africanus TCF52B]
Length = 576
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 19/102 (18%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELM 64
L+ SGG DSS + A++ + Y + +E KK+ E +
Sbjct: 317 KKVLIGLSGGMDSSLVAAIAVEALGNKNVVGILMPSMYSSSHSIE------DAKKLAENL 370
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNL 103
E HI+ ++ + +SL K + I + NL
Sbjct: 371 EI------EYHIIKISDIYYSFKNSLKDIFKGTSEDITEENL 406
>gi|206890224|ref|YP_002248861.1| ATPase, PP-loop superfamily [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742162|gb|ACI21219.1| ATPase, PP-loop superfamily [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 304
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRK 58
+ K S L+ SGG+DS + L D ++ L D G + E C ++
Sbjct: 48 KMFSKKDSILIAVSGGKDSMSILKALKDMEYNIKALHIDVGIGEVSKKSKEFVQEFCEKE 107
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISH 87
I L E+ LPL L IS
Sbjct: 108 DI----SLKTIKLQEEIQLPLKELSKISK 132
>gi|146304735|ref|YP_001192051.1| argininosuccinate synthase [Metallosphaera sedula DSM 5348]
gi|172046953|sp|A4YI75|ASSY_METS5 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|145702985|gb|ABP96127.1| argininosuccinate synthase [Metallosphaera sedula DSM 5348]
Length = 391
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQR---NKVELEC--RLCVRKKIVEL 63
+L +SGG D++ + W + F V ++S D GQ+ K+E + +V+
Sbjct: 2 KIVLAYSGGLDTTVAIKWLSETFHAEVISVSVDVGQKDDFKKIEERAYKAGSAKHYLVDA 61
Query: 64 MPKWKDSLGEDHI 76
++ ++ I
Sbjct: 62 KREFAENFALKDI 74
>gi|327357970|gb|EGE86827.1| asparagine synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 577
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DSS S A R + LS
Sbjct: 233 VLLSGGLDSSLVASIAQRETLRQQALS 259
>gi|297626267|ref|YP_003688030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922032|emb|CBL56594.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 357
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS-L 71
+ SGG DS+ + ++ + G + E V + + W
Sbjct: 5 VALSGGVDSAVTAARVVEAGHEAVGVHLLLGAGSVPETRDARGVADAVGIPLVVWDLRDR 64
Query: 72 GEDHILP 78
E +L
Sbjct: 65 FEHRVLD 71
>gi|298293305|ref|YP_003695244.1| argininosuccinate synthase [Starkeya novella DSM 506]
gi|296929816|gb|ADH90625.1| argininosuccinate synthase [Starkeya novella DSM 506]
Length = 408
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLC 55
+ +L +SGG D+S L W + V T + D GQ ++E R
Sbjct: 1 MANDVKKVVLAYSGGLDTSVILKWLQTTYGCEVVTFTADLGQGEELEPARRKA 53
>gi|260428163|ref|ZP_05782142.1| delta-aminolevulinic acid dehydratase [Citreicella sp. SE45]
gi|260422655|gb|EEX15906.1| delta-aminolevulinic acid dehydratase [Citreicella sp. SE45]
Length = 350
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 15/65 (23%)
Query: 110 GRNIIFLVFAATLA--------YRLGITNIVIGVCETDYSGY---PDCRHDTIRAIETAI 158
RN + L +AA A +G + G + D S Y P + +R IE +
Sbjct: 209 FRNTLLLSYAAKYASAFYGPFRDAVGAS----GALKGDKSTYQMQPGNSDEAMRLIERDL 264
Query: 159 NLGME 163
+ G +
Sbjct: 265 SEGAD 269
>gi|290343501|ref|YP_003494868.1| hypothetical protein OTV1_028 [Ostreococcus tauri virus 1]
gi|260160916|emb|CAY39616.1| hypothetical protein OTV1_028 [Ostreococcus tauri virus 1]
Length = 506
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
L SGG DSS + A + R+ T S G +LE V +
Sbjct: 216 LLSGGLDSSLIAAIAARKIGRIRTFSI--GLEGSPDLEAARKVATYLA 261
>gi|239610270|gb|EEQ87257.1| asparagine synthetase [Ajellomyces dermatitidis ER-3]
Length = 573
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DSS S A R + LS
Sbjct: 229 VLLSGGLDSSLVASIAQRETLRQQALS 255
>gi|261192619|ref|XP_002622716.1| asparagine synthetase [Ajellomyces dermatitidis SLH14081]
gi|239589198|gb|EEQ71841.1| asparagine synthetase [Ajellomyces dermatitidis SLH14081]
Length = 560
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DSS S A R + LS
Sbjct: 216 VLLSGGLDSSLVASIAQRETLRQQALS 242
>gi|163795297|ref|ZP_02189264.1| Argininosuccinate synthase [alpha proteobacterium BAL199]
gi|159179283|gb|EDP63814.1| Argininosuccinate synthase [alpha proteobacterium BAL199]
Length = 404
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 5 IKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ +P ++L +SGG D+S L W D + V T + D GQ +E + E
Sbjct: 1 MADSPKKVVLAYSGGLDTSIILRWLQDTYNCEVVTFTADLGQGEDLEPARAKAKMMGVKE 60
Query: 63 LM 64
+
Sbjct: 61 IF 62
>gi|153003186|ref|YP_001377511.1| NAD+ synthetase [Anaeromyxobacter sp. Fw109-5]
gi|152026759|gb|ABS24527.1| NAD+ synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 567
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 8/87 (9%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLC----VRKKI 60
SA++ SGG DS+ A D L Y + E L + K
Sbjct: 309 RSAIVGLSGGIDSALTACLAADALGAANVLGVAMPSRYSSGHSREDAAALADHLGIPFKE 368
Query: 61 VELMPKWKDSLGEDHILPLAILGDISH 87
+ + P LG+ LGD++
Sbjct: 369 ISIEPMHAAFLGQIEAAEGKPLGDLAE 395
>gi|303327373|ref|ZP_07357814.1| argininosuccinate synthase [Desulfovibrio sp. 3_1_syn3]
gi|302862313|gb|EFL85246.1| argininosuccinate synthase [Desulfovibrio sp. 3_1_syn3]
Length = 401
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
++ +L +SGG D+S L W ++ + V T + D GQ
Sbjct: 1 MQDVKKVVLAYSGGLDTSVILKWLIETYHCEVITCTADLGQ 41
>gi|302344498|ref|YP_003809027.1| asparagine synthase (glutamine-hydrolyzing) [Desulfarculus baarsii
DSM 2075]
gi|301641111|gb|ADK86433.1| asparagine synthase (glutamine-hydrolyzing) [Desulfarculus baarsii
DSM 2075]
Length = 625
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 13 LLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
+ SGG DS+T ++ D + T Y ELE + K
Sbjct: 256 VFLSGGLDSTTVVAQMRALDVDPLRTFIIGYPDPTFSELEYAEDMAKH 303
>gi|262306033|gb|ACY45609.1| gln amidotransferase [Derocheilocaris typicus]
Length = 196
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYG 43
+ L+L SGG DS+ C + ++ + D G
Sbjct: 43 NRNVLMLMSGGVDSTACAALLQKSLNQRQIFAVHIDNG 80
>gi|254780999|ref|YP_003065412.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62]
gi|254040676|gb|ACT57472.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62]
Length = 562
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 8/95 (8%)
Query: 10 SALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
++ SGG DS+ C + A+ + L + Y +E + C + +
Sbjct: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE-DAAACAKALGCKYDV 352
Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD 100
L +++ + VA IQ
Sbjct: 353 LPIHDLVNH---FFSLMSQFLQEEPSGIVAENIQS 384
>gi|167753181|ref|ZP_02425308.1| hypothetical protein ALIPUT_01452 [Alistipes putredinis DSM 17216]
gi|167659495|gb|EDS03625.1| hypothetical protein ALIPUT_01452 [Alistipes putredinis DSM 17216]
Length = 644
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRV 35
++ SGG DS+ L A+ FDR+
Sbjct: 348 KKVVIGVSGGLDSTLALLIAVRTFDRL 374
>gi|144898595|emb|CAM75459.1| Argininosuccinate synthase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 404
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L +SGG D+S L W D++ V T + D GQ ++E R + ++ +
Sbjct: 6 KKVVLAYSGGLDTSIILRWLQDQYQCEVVTFTADLGQGEELE-PARKKAQLMGIKDENIF 64
Query: 68 KDSLGEDHILP 78
D L E+ +
Sbjct: 65 IDDLREEFVRD 75
>gi|120404536|ref|YP_954365.1| asparagine synthase [Mycobacterium vanbaalenii PYR-1]
gi|119957354|gb|ABM14359.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium
vanbaalenii PYR-1]
Length = 651
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 283 LSGGIDSTAIAALAMRHNPRLITFTTGFEREGFSEVDVAVASAEAIGA 330
>gi|297192617|ref|ZP_06910015.1| bifunctional GMP synthase/glutamine amidotransferase [Streptomyces
pristinaespiralis ATCC 25486]
gi|297151442|gb|EFH31171.1| bifunctional GMP synthase/glutamine amidotransferase [Streptomyces
pristinaespiralis ATCC 25486]
Length = 558
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELE-------CRLCVRKK 59
A+ SGG DS+ + ++ + D+G K E E V+ K
Sbjct: 227 TKRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETEQVEKDFVAATGVQLK 286
Query: 60 IVELMPKWKDSLG 72
+V+ ++ D+L
Sbjct: 287 VVDAADRFLDALA 299
>gi|270159842|ref|ZP_06188498.1| tRNA(Ile)-lysidine synthase [Legionella longbeachae D-4968]
gi|289165400|ref|YP_003455538.1| cell cycle protein MesJ [Legionella longbeachae NSW150]
gi|269988181|gb|EEZ94436.1| tRNA(Ile)-lysidine synthase [Legionella longbeachae D-4968]
gi|288858573|emb|CBJ12454.1| cell cycle protein MesJ [Legionella longbeachae NSW150]
Length = 460
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 12 LLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG 43
++ FSGG DS+ L D++ + ++G
Sbjct: 21 IVGFSGGLDSTVLLHALAAHPILLDKIVAVHVNHG 55
>gi|32474336|ref|NP_867330.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopirellula baltica SH 1]
gi|81657396|sp|Q7TTZ4|MNMA_RHOBA RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|32444874|emb|CAD74876.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopirellula baltica SH 1]
Length = 399
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
+L SGG DSS L V + +G E C
Sbjct: 3 RVVLAMSGGVDSSVAAHLLLRDGHEVIGVFMRHG-----EASAAAC 43
>gi|15791215|ref|NP_281039.1| argininosuccinate synthase [Halobacterium sp. NRC-1]
gi|169236971|ref|YP_001690171.1| argininosuccinate synthase [Halobacterium salinarum R1]
gi|30172950|sp|Q9HMQ2|ASSY_HALSA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|10581841|gb|AAG20519.1| argininosuccinate synthetase [Halobacterium sp. NRC-1]
gi|167728037|emb|CAP14825.1| argininosuccinate synthase [Halobacterium salinarum R1]
Length = 396
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 15 FSGGQDSSTCLSWALDR--FDRVETLSFDYGQ 44
FSGG D++ C+ + +D V ++ D GQ
Sbjct: 10 FSGGLDTTVCVPLLKEEYGYDDVIGVTVDVGQ 41
>gi|319440352|ref|ZP_07989508.1| argininosuccinate synthase [Corynebacterium variabile DSM 44702]
Length = 400
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ 44
+L +SGG D++ + V +S D GQ
Sbjct: 1 MTDRVVLAYSGGLDTTVAIPYLKQMTGGEVVAVSIDLGQ 39
>gi|300709572|ref|YP_003735386.1| argininosuccinate synthase [Halalkalicoccus jeotgali B3]
gi|299123255|gb|ADJ13594.1| argininosuccinate synthase [Halalkalicoccus jeotgali B3]
Length = 411
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 15 FSGGQDSSTCLSWALDR--FDRVETLSFDYGQ 44
FSGG D++ C+ + +D V ++ D GQ
Sbjct: 8 FSGGLDTTVCVPLLEEEYGYDEVIGVTVDVGQ 39
>gi|239624724|ref|ZP_04667755.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521110|gb|EEQ60976.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 432
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + V K ++ +
Sbjct: 138 RKVLLALSGGVDSSVVAALLIKAIGRQLTCVHVNHGLMRKGESESVIEVFKNQMDANLVY 197
Query: 68 KDSL 71
D++
Sbjct: 198 VDAV 201
>gi|146340154|ref|YP_001205202.1| GMP synthase [Bradyrhizobium sp. ORS278]
gi|226738392|sp|A4YSU1|GUAA_BRASO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|146192960|emb|CAL76967.1| GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase)
(GMP synthetase) [Bradyrhizobium sp. ORS278]
Length = 535
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 31/191 (16%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + D++ + D+G RL + +V+L
Sbjct: 239 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHG-------LLRLNEAETVVDLFRHHY 291
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-G 127
+ LG+++ + + I GR +F+ A ++ G
Sbjct: 292 NIPLVHVDASKLFLGELAGVTDPEAKRKTI-----------GR--LFIDVFEAEAKKIGG 338
Query: 128 ITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
+ G D ++G P TI++ L ++ + PL L K E
Sbjct: 339 ADFLAQGTLYPDVIESVSFTGGP---SVTIKSHHNVGGLPARMNMKLVEPLRELFKDEVR 395
Query: 182 KLAQDIGGQDL 192
L +++G D+
Sbjct: 396 VLGRELGLPDV 406
>gi|77920359|ref|YP_358174.1| hypothetical protein Pcar_2769 [Pelobacter carbinolicus DSM 2380]
gi|77546442|gb|ABA90004.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 325
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
AL L SGG DS+ + V + F
Sbjct: 3 KALGLISGGLDSTLAALTLKQQGVDVTGIVF 33
>gi|322412887|gb|EFY03795.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 373
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS ++ V +
Sbjct: 1 MTD--NSNTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|302829943|ref|XP_002946538.1| hypothetical protein VOLCADRAFT_120281 [Volvox carteri f.
nagariensis]
gi|300268284|gb|EFJ52465.1| hypothetical protein VOLCADRAFT_120281 [Volvox carteri f.
nagariensis]
Length = 536
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYG 43
+ + A+ SGG DS+ + +R+ + D G
Sbjct: 224 EQVGPEEHAICALSGGVDSTVAATLVHKVLGERLHCVFVDNG 265
>gi|251783539|ref|YP_002997844.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242392171|dbj|BAH82630.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
Length = 379
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS ++ V +
Sbjct: 7 MTD--NSNTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 42
>gi|229522890|ref|ZP_04412304.1| NAD synthetase [Vibrio cholerae TM 11079-80]
gi|229527821|ref|ZP_04417212.1| NAD synthetase [Vibrio cholerae 12129(1)]
gi|229334183|gb|EEN99668.1| NAD synthetase [Vibrio cholerae 12129(1)]
gi|229340107|gb|EEO05115.1| NAD synthetase [Vibrio cholerae TM 11079-80]
Length = 285
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 62/206 (30%), Gaps = 36/206 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 40 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGEQKDEDE 99
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + + + N+
Sbjct: 100 AQLALSFIRPTHSVSVNIKAGVDGLHAASHHALANTGL-IPSDPAKVDFIKGNVK----- 153
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 154 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 196
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNL 195
PL L K + LA+ +G + +
Sbjct: 197 APLFGLNKRQVRLLAKTLGAPEQLVY 222
>gi|198423337|ref|XP_002126319.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
(Glutamine amidotransferase) (GMP synthetase) [Ciona
intestinalis]
Length = 719
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 8 APSALLLFSGGQDSSTCL---SWALDRFDRVETLSFDYG 43
L+L SGG DS+ ALD +V + D G
Sbjct: 260 KSKVLVLVSGGVDSTVLATLCYKALDA-TQVVAIHVDNG 297
>gi|163955001|ref|YP_001648105.1| hypothetical protein OsV5_028r [Ostreococcus virus OsV5]
gi|163638450|gb|ABY27809.1| hypothetical protein OsV5_028r [Ostreococcus virus OsV5]
Length = 506
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
L SGG DSS + A + R+ T S G +LE V +
Sbjct: 216 LLSGGLDSSLIAAIAARKIGRIRTFSI--GLEGSPDLEAARKVATYLA 261
>gi|170744674|ref|YP_001773329.1| argininosuccinate synthase [Methylobacterium sp. 4-46]
gi|168198948|gb|ACA20895.1| Argininosuccinate synthase [Methylobacterium sp. 4-46]
Length = 413
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK 58
M +K ++L +SGG D+S L W + V T + D GQ ++E R
Sbjct: 1 MAHPTQKRVQKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEPARRKAELL 60
Query: 59 KIVE---LMPKWKDSLGEDHILPL 79
I + ++ D++ P+
Sbjct: 61 GIKPENIFIEDLREEFVRDYVFPM 84
>gi|73663123|ref|YP_301904.1| argininosuccinate synthase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119361330|sp|Q49WA0|ASSY_STAS1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|72495638|dbj|BAE18959.1| argininosuccinate synthase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 401
Score = 36.0 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL 50
+L +SGG D+S + W LD+ V D G+ +EL
Sbjct: 1 MKEKIVLAYSGGLDTSVAVKWLLDKGYDVVACCLDVGEGKDLEL 44
>gi|323128291|gb|ADX25588.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 373
Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M D ++ SGG DSS ++ V +
Sbjct: 1 MTD--NSNTRVVVGMSGGVDSSVTALLLKEQGYDVIGV 36
>gi|15679265|ref|NP_276382.1| argininosuccinate synthase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|5915701|sp|O27322|ASSY_METTH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|2622367|gb|AAB85743.1| argininosuccinate synthase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 399
Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L FSGG D+S C+ ++++ V T D GQ + E+E V K++
Sbjct: 7 DKVVLAFSGGLDTSVCIKLLEEKYNMEVITACVDVGQ-PRDEIERPAMVAKELGNYRHYT 65
Query: 68 KDS 70
D+
Sbjct: 66 VDA 68
>gi|327543019|gb|EGF29466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Rhodopirellula baltica WH47]
Length = 399
Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
+L SGG DSS L V + +G E C
Sbjct: 3 RVVLAMSGGVDSSVAAHLLLRDGHEVIGVFMRHG-----EASAAAC 43
>gi|325293042|ref|YP_004278906.1| NH3-dependent NAD synthetase [Agrobacterium sp. H13-3]
gi|325060895|gb|ADY64586.1| NH3-dependent NAD synthetase [Agrobacterium sp. H13-3]
Length = 559
Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 4 IIKKAPSALLL-FSGGQDSSTCLSWALDRFDR----VETLSFDY 42
+ K +++L SGG DS+ C + A+D L + Y
Sbjct: 287 VNKNGFKSVVLGLSGGIDSAICAALAVDALGEERVRCIMLPYRY 330
>gi|310829791|ref|YP_003962148.1| GMP synthase [Eubacterium limosum KIST612]
gi|308741525|gb|ADO39185.1| GMP synthase [Eubacterium limosum KIST612]
Length = 435
Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + + ++ + ++G K E E + V K ++ +
Sbjct: 141 RKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKGESESVVEVFKNQLDANLVY 200
Query: 68 KDS 70
D+
Sbjct: 201 VDA 203
>gi|257055323|ref|YP_003133155.1| sulfate adenylyltransferase subunit 2 [Saccharomonospora viridis
DSM 43017]
gi|256585195|gb|ACU96328.1| sulfate adenylyltransferase subunit 2 [Saccharomonospora viridis
DSM 43017]
Length = 306
Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 12 LLLFSGGQDSSTCLSWALDRF 32
++LFSGG+DS+ L A+ F
Sbjct: 37 VILFSGGKDSTLLLHLAIKAF 57
>gi|229489580|ref|ZP_04383443.1| GMP synthase [Rhodococcus erythropolis SK121]
gi|229323677|gb|EEN89435.1| GMP synthase [Rhodococcus erythropolis SK121]
Length = 523
Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE--CRLCVRKKIVE 62
A+ SGG DS+ + DR+ + D+ G+R +VE + R V+
Sbjct: 221 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLMRAGERTQVEQDFVAATGARLITVD 280
Query: 63 LMPKWKDSLG 72
+ L
Sbjct: 281 AADTFIGELA 290
>gi|195400843|ref|XP_002059025.1| GJ15215 [Drosophila virilis]
gi|194141677|gb|EDW58094.1| GJ15215 [Drosophila virilis]
Length = 363
Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ ++ SGG DS+ +R V +
Sbjct: 3 RNVVVGMSGGVDSAVSAHLLKERGYNVLGV 32
>gi|312622345|ref|YP_004023958.1| gmp synthase, large subunit [Caldicellulosiruptor kronotskyensis
2002]
gi|312202812|gb|ADQ46139.1| GMP synthase, large subunit [Caldicellulosiruptor kronotskyensis
2002]
Length = 511
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
+ SGG DSS + + D+G K E E + V K
Sbjct: 215 NQKVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEAEEVMSVFK 266
>gi|312127518|ref|YP_003992392.1| gmp synthase, large subunit [Caldicellulosiruptor hydrothermalis
108]
gi|311777537|gb|ADQ07023.1| GMP synthase, large subunit [Caldicellulosiruptor hydrothermalis
108]
Length = 511
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 8 APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
+ SGG DSS + + D+G K E E + V K
Sbjct: 215 NQKVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEAEEVMSVFK 266
>gi|163867327|ref|YP_001608521.1| argininosuccinate synthase [Bartonella tribocorum CIP 105476]
gi|189046381|sp|A9IL50|ASSY_BART1 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|161016968|emb|CAK00526.1| Argininosuccinate synthase [Bartonella tribocorum CIP 105476]
Length = 411
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL-MPK 66
+L +SGG D+S L W D V T + D GQ ++EL R + E+ +
Sbjct: 8 RKVVLAYSGGLDTSIILKWLQSTLDAEVVTFTADLGQGEELELARRKAEMLGVKEIYIED 67
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ D + P+ + + ++
Sbjct: 68 LREEFVRDFVFPMFRANTVYEGAYLLGTSIA 98
>gi|325958014|ref|YP_004289480.1| argininosuccinate synthase [Methanobacterium sp. AL-21]
gi|325329446|gb|ADZ08508.1| Argininosuccinate synthase [Methanobacterium sp. AL-21]
Length = 393
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L FSGG D+S C+ ++++ V T D GQ + E+E V I + K
Sbjct: 2 EKVVLAFSGGLDTSVCVKLLQEKYNMEVVTACVDVGQ-PEDEIERPAQVANNIG--VKKH 58
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAM 96
+ I I +++ + +
Sbjct: 59 YTIDAKHEFAEEFIFRAIKANAMYEGYPL 87
>gi|307947086|ref|ZP_07662421.1| GMP synthase [Roseibium sp. TrichSKD4]
gi|307770750|gb|EFO29976.1| GMP synthase [Roseibium sp. TrichSKD4]
Length = 516
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 31/190 (16%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+ SGG DSS + D++ + D+G R +++V +
Sbjct: 219 KKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHG-------LLRQGEAEEVVTMFRDH 271
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRL 126
+ LG + S + I GR +F+ A
Sbjct: 272 YNMQLIHADEQDLFLGALEGVSDPEEKRKTI-----------GR--LFIDVFQKHANEID 318
Query: 127 GITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
G + G D +SG P TI++ L + + + PL L K E
Sbjct: 319 GAEFLAQGTLYPDVIESVSFSGGP---SVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEV 375
Query: 181 WKLAQDIGGQ 190
+L ++G
Sbjct: 376 RRLGVELGLP 385
>gi|300784104|ref|YP_003764395.1| asparagine synthase [Amycolatopsis mediterranei U32]
gi|299793618|gb|ADJ43993.1| asparagine synthase [Amycolatopsis mediterranei U32]
Length = 644
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 17/46 (36%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+ + A + + + + + E++ I
Sbjct: 277 LSGGIDSTATATLAKEHNPNLIAFTTGFEREGYSEVDVAAESAAAI 322
>gi|264680405|ref|YP_003280315.1| PP-loop [Comamonas testosteroni CNB-2]
gi|262210921|gb|ACY35019.1| PP-loop [Comamonas testosteroni CNB-2]
Length = 330
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 45/151 (29%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++I++ ++ SGG+DS T L L+ R V+ IV
Sbjct: 64 NMIEEGDRVMVCMSGGKDSYTLLDILRK-------------------LQKRAPVKFDIVA 104
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT---FVP---------- 109
+ K +H+LP + V I++ + + VP
Sbjct: 105 VNLDQKQPGFPEHVLPEYF--------QSIGVDYHIENQDTYSVVKRVVPEGKTTCGLCS 156
Query: 110 -GRNIIFLVFAATLAYRLGITNIVIGVCETD 139
R I A +LG T + +G D
Sbjct: 157 RLRRAILYKV----ADQLGCTKVALGHHRDD 183
>gi|108800265|ref|YP_640462.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium sp. MCS]
gi|119869393|ref|YP_939345.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium sp. KMS]
gi|126435888|ref|YP_001071579.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium sp. JLS]
gi|108770684|gb|ABG09406.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium sp. MCS]
gi|119695482|gb|ABL92555.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium sp. KMS]
gi|126235688|gb|ABN99088.1| asparagine synthase (glutamine-hydrolysing) [Mycobacterium sp. JLS]
Length = 655
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ R+ T + + + E++ + + I
Sbjct: 287 LSGGIDSTAIAALAMRHNPRLITFTTGFEREGFSEVDVAVASAEAIGA 334
>gi|152989329|ref|YP_001347945.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas aeruginosa PA7]
gi|205816889|sp|A6V4G0|MNMA_PSEA7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|150964487|gb|ABR86512.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas aeruginosa PA7]
Length = 375
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 15/138 (10%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKI 60
+ + ++ SGG DSS + +VE L +N E + C ++
Sbjct: 4 SAPTPRRERVIVGMSGGVDSSVSALLLQQQGYQVEGLFM----KNWDEDDGTEYCTARED 59
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFL 116
+ D +G L A ++ ++ + + PN P R I F
Sbjct: 60 LADAQAVCDRIGIK--LHTANFAAEYWDNVFEHFLAEYKAGRTPN---PDILCNREIKFK 114
Query: 117 VFAATLAYRLGITNIVIG 134
F A LG I G
Sbjct: 115 AF-LDYALMLGADLIATG 131
>gi|332159476|ref|YP_004424755.1| hypothetical protein PNA2_1836 [Pyrococcus sp. NA2]
gi|331034939|gb|AEC52751.1| hypothetical protein PNA2_1836 [Pyrococcus sp. NA2]
Length = 228
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+L+SGG+DS+ L WAL V+ L
Sbjct: 9 VLYSGGKDSNYALYWALKNGFNVKFL 34
>gi|317122065|ref|YP_004102068.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermaerobacter marianensis DSM 12885]
gi|315592045|gb|ADU51341.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermaerobacter marianensis DSM 12885]
Length = 405
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 43/143 (30%), Gaps = 16/143 (11%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMPKW 67
L SGG DSS + D V ++ E E R C ++ +
Sbjct: 8 RVLAAMSGGVDSSVMAALLRDEGYEVIGVTMQTWPAMAAEDEARYGGCCSLSAIDDARRV 67
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLA 123
+ LG + + + + + PN P R I F F A
Sbjct: 68 AERLGIPYYVM--NMRQDFEEKVIDYFVEEYLRGRTPN---PCIACNRYIKFDEF-LRRA 121
Query: 124 YRLGITNIVIG----VCETDYSG 142
LG + G V D +G
Sbjct: 122 QALGCDYVATGHYAIVEYDDAAG 144
>gi|302545965|ref|ZP_07298307.1| glutamine-dependent NAD(+) synthetase [Streptomyces hygroscopicus
ATCC 53653]
gi|302463583|gb|EFL26676.1| glutamine-dependent NAD(+) synthetase [Streptomyces himastatinicus
ATCC 53653]
Length = 589
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSF--DYGQRNKV----ELECRLCVRKKI 60
S L+ SGG DS+ + A D V ++ Y + + EL R + +
Sbjct: 331 RSVLIGLSGGIDSALVAAIACDAVGAQNVYGVAMPSRYSSEHSIGDATELARRTGLNFRT 390
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
V + P + +G H+ LA S T +A+ Q+ ++
Sbjct: 391 VPIAPMFDAYMGSLHLTGLAEENLQSRLRGTMLMALSNQEGHI 433
>gi|302525345|ref|ZP_07277687.1| asparagine synthase [Streptomyces sp. AA4]
gi|302434240|gb|EFL06056.1| asparagine synthase [Streptomyces sp. AA4]
Length = 638
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 17/46 (36%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+ + A + + + + + E++ I
Sbjct: 271 LSGGIDSTATATLAKEHNPNLIAFTTGFEREGYSEVDVAAESAAAI 316
>gi|108806863|ref|YP_650779.1| argininosuccinate synthase [Yersinia pestis Antiqua]
gi|108778776|gb|ABG12834.1| argininosuccinate synthase [Yersinia pestis Antiqua]
Length = 121
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
FSGG D+S L W + + + GQ + E + +K +E + +
Sbjct: 18 FSGGLDTSAALLWMQKKGAIPYAYTANLGQ---PDEEDYEAIPRKAMEYGAEKARLIDCR 74
Query: 75 HILPLAILGDISHSSLTKNVA 95
L + I + A
Sbjct: 75 KQLVAEGIAAIQCGAFHNTTA 95
>gi|327398290|ref|YP_004339159.1| Argininosuccinate synthase [Hippea maritima DSM 10411]
gi|327180919|gb|AEA33100.1| Argininosuccinate synthase [Hippea maritima DSM 10411]
Length = 400
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE 49
+ + +L +SGG D+S + W D++ V T + D GQ +E
Sbjct: 1 MGEIKKVVLAYSGGLDTSVIVKWLQDKYGCEVITYTADLGQNEDLE 46
>gi|317178655|dbj|BAJ56443.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Helicobacter pylori F30]
Length = 508
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 1 MNDIIKKAPSALLLF--SGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
M + +K +A +L SGG DS+ T L A+ D + + D+G K E E
Sbjct: 200 MARLKEKIANAKVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKERVQA 257
Query: 56 VRKKI 60
+ K +
Sbjct: 258 MFKDL 262
>gi|313884543|ref|ZP_07818304.1| tRNA(Ile)-lysidine synthetase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620327|gb|EFR31755.1| tRNA(Ile)-lysidine synthetase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 492
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
Query: 6 KKAPSALLLFSGGQDSST-------CLSWALDRFDRVETLSFDYGQRNKVELECRL---- 54
++ ++ SGG DS L+ ++ + F++ R+ +L+ L
Sbjct: 19 QQTDKLVMGVSGGLDSMVLLDLMIKLLALKENQGKEIIVAHFNHHLRSDADLDASLVESF 78
Query: 55 CVRKKIVELMPKWKD 69
C ++ + +W++
Sbjct: 79 CHHHQLTYFIGEWQE 93
>gi|261212628|ref|ZP_05926912.1| NAD synthetase [Vibrio sp. RC341]
gi|260837693|gb|EEX64370.1| NAD synthetase [Vibrio sp. RC341]
Length = 276
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDR--------FDRVETLSFDYG-QRNKVE 49
+ +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 31 KLTDARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTSDYQFIAVRLPYGEQKDEEE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + T + N+
Sbjct: 91 AQLALSFIRPTHSVSVNIKAGVDGLHAASQQALANTGLV-PTDPAKIDFIKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + LA+ +G +
Sbjct: 188 APLYGLNKRQVRLLAETLGAPAQL 211
>gi|206889455|ref|YP_002249424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206889622|ref|YP_002249374.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741393|gb|ACI20450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741560|gb|ACI20617.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 342
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
LL SGG DSS ++ VE + F
Sbjct: 2 EKVLLAMSGGIDSSVAAYLLREKGMAVEGVFF 33
>gi|332703919|ref|ZP_08424007.1| Argininosuccinate synthase [Desulfovibrio africanus str. Walvis
Bay]
gi|332554068|gb|EGJ51112.1| Argininosuccinate synthase [Desulfovibrio africanus str. Walvis
Bay]
Length = 398
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S L W +D V T + D GQ + EL+ KK
Sbjct: 1 MSDIRKVVLAYSGGLDTSIILKWIKMTYDCEVVTFTADLGQ--EEELDGLEDKAKKTGAS 58
Query: 64 MPKWKD 69
+D
Sbjct: 59 KAYVED 64
>gi|300788496|ref|YP_003768787.1| sulfate adenylyltransferase subunit 2 [Amycolatopsis mediterranei
U32]
gi|299798010|gb|ADJ48385.1| sulfate adenylyltransferase subunit 2 [Amycolatopsis mediterranei
U32]
Length = 306
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 12 LLLFSGGQDSSTCLSWALDRF 32
++LFSGG+DS+ L A+ F
Sbjct: 37 VILFSGGKDSTLLLHLAIKAF 57
>gi|212703476|ref|ZP_03311604.1| hypothetical protein DESPIG_01520 [Desulfovibrio piger ATCC 29098]
gi|212673090|gb|EEB33573.1| hypothetical protein DESPIG_01520 [Desulfovibrio piger ATCC 29098]
Length = 550
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 9 PSALLLFSGGQDSSTCLSWALD 30
A++ SGG DS+ L A +
Sbjct: 290 EKAIVALSGGMDSALVLCVAAE 311
>gi|119470125|ref|ZP_01612891.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alteromonadales bacterium TW-7]
gi|119446546|gb|EAW27820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Alteromonadales bacterium TW-7]
Length = 366
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 8 KVIVGMSGGVDSSVSAYLLQQQGYQVEGL 36
>gi|13541621|ref|NP_111309.1| thiamine biosynthesis protein ThiI [Thermoplasma volcanium GSS1]
gi|20140709|sp|Q97AK6|THII_THEVO RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
protein ThiS sulfurtransferase; AltName: Full=Thiamine
biosynthesis protein thiI; AltName: Full=tRNA
4-thiouridine synthase
gi|14325020|dbj|BAB59946.1| hypohtetical protein [Thermoplasma volcanium GSS1]
Length = 476
Score = 36.0 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 73/188 (38%), Gaps = 33/188 (17%)
Query: 12 LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
+ + SGG DS + R + S + ++ + L + KK+VE ++D
Sbjct: 172 ISMVSGGIDSPVATWLMMKRGSPCDIFFCSLA----DPIDTQAFLEIAKKLVERWSPYRD 227
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNIIFLVFAATLAYRLG 127
+ +A D+ +++ ++ + N TF V R LA RL
Sbjct: 228 GN-----VFIADCRDL-----IRDMVIEKKTNFNNVTFKKVLYR----------LAERLA 267
Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
+G+ + G + + E +++ + ++ PL+ L K E +A+DI
Sbjct: 268 EKYRYLGIVTGESLG-----QVSSQTAENLLSIEHGINFPIYRPLIGLDKDEITAIARDI 322
Query: 188 GGQDLVNL 195
G N+
Sbjct: 323 GTFPEKNV 330
>gi|119582263|gb|EAW61859.1| hCG1640784 [Homo sapiens]
Length = 339
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
+ S +L +SGG ++S L W ++ V + GQ+ E
Sbjct: 1 MSSKGSMVLAYSGGLNTSCILVWLKEQGYDVTAYLANTGQKEDFEEAR 48
>gi|154249760|ref|YP_001410585.1| ExsB family protein [Fervidobacterium nodosum Rt17-B1]
gi|154153696|gb|ABS60928.1| ExsB family protein [Fervidobacterium nodosum Rt17-B1]
Length = 358
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 12 LLLFSGGQDSST-CLSWALDRFDR-VETLSFDYG 43
++ FSGG DS+ L A +E + YG
Sbjct: 25 VVAFSGGMDSTASALLCAEAIGKENIELVHVVYG 58
>gi|330836254|ref|YP_004410895.1| tRNA-specific 2-thiouridylase mnmA [Spirochaeta coccoides DSM
17374]
gi|329748157|gb|AEC01513.1| tRNA-specific 2-thiouridylase mnmA [Spirochaeta coccoides DSM
17374]
Length = 357
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS + V +
Sbjct: 2 KILVGMSGGIDSSVAAWLLKQQGYEVIGAT 31
>gi|266619710|ref|ZP_06112645.1| putative NH(3)-dependent NAD(+) synthetase [Clostridium hathewayi
DSM 13479]
gi|288868734|gb|EFD01033.1| putative NH(3)-dependent NAD(+) synthetase [Clostridium hathewayi
DSM 13479]
Length = 94
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 15 FSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
FSGG DSS L A +V ++FD +LE V +++ +
Sbjct: 28 FSGGVDSSLLLKAAAEAVKKTGKKVYAVTFDSRLHPSCDLEIARRVAEELGGIHEVITVD 87
Query: 71 LGEDHIL 77
E +
Sbjct: 88 ELEQKEI 94
>gi|315499307|ref|YP_004088111.1| nad+ synthetase [Asticcacaulis excentricus CB 48]
gi|315417319|gb|ADU13960.1| NAD+ synthetase [Asticcacaulis excentricus CB 48]
Length = 679
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRV 35
M I ++++ SGG DS+ L A FDR+
Sbjct: 353 MRRIESTGAKSVVIGVSGGLDSTHALIVACKAFDRL 388
>gi|222087492|ref|YP_002546029.1| argininosuccinate synthase [Agrobacterium radiobacter K84]
gi|221724940|gb|ACM28096.1| argininosuccinate synthase [Agrobacterium radiobacter K84]
Length = 407
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL- 63
K +L +SGG D+S L W V T + D GQ ++E + I E+
Sbjct: 5 KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEPARKKAELLGIKEIY 64
Query: 64 MPKWKDSLGEDHILPL 79
+ ++ D + P+
Sbjct: 65 IEDVREEFVRDFVFPM 80
>gi|192359196|ref|YP_001982540.1| hypothetical protein CJA_2075 [Cellvibrio japonicus Ueda107]
gi|254789871|sp|B3PID5|TTCA_CELJU RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|190685361|gb|ACE83039.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107]
Length = 302
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 49/151 (32%), Gaps = 45/151 (29%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++I+ ++ SGG+DS T L L L+ +R ++V
Sbjct: 32 NMIEDGDKVMVCLSGGKDSYTMLDILLS-------------------LQQTAPIRFELVA 72
Query: 63 LMPKWKDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPG---------- 110
+ K +H+LP LA LG H ++ + VP
Sbjct: 73 VNMDQKQPGFPEHVLPNYLAQLGVPFHIIERDTYSIVKE-------VVPEGKTTCGLCSR 125
Query: 111 --RNIIFLVFAATLAYRLGITNIVIGVCETD 139
R + A +G T I +G D
Sbjct: 126 LRRGTL-----YGFADEIGATKIALGHHRDD 151
>gi|182415638|ref|YP_001820704.1| tRNA-specific 2-thiouridylase MnmA [Opitutus terrae PB90-1]
gi|205816897|sp|B1ZZ32|MNMA_OPITP RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|177842852|gb|ACB77104.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Opitutus terrae PB90-1]
Length = 378
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRV 35
+ A L+ SGG DSS + V
Sbjct: 1 MPGAEKILVAMSGGVDSSVAALLLKQQGYDV 31
>gi|332535582|ref|ZP_08411352.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035000|gb|EGI71520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 366
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ SGG DSS + +VE L
Sbjct: 8 KVIVGMSGGVDSSVSAYLLQQQGYQVEGL 36
>gi|331698313|ref|YP_004334552.1| asparagine synthase [Pseudonocardia dioxanivorans CB1190]
gi|326953002|gb|AEA26699.1| asparagine synthase (glutamine-hydrolyzing) [Pseudonocardia
dioxanivorans CB1190]
Length = 637
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 18/46 (39%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+ + A + + T + + + E++ I
Sbjct: 266 LSGGIDSTAIAALAKEHNPDLITFTTGFEREGYSEIDVAAESAAAI 311
>gi|293390099|ref|ZP_06634433.1| argininosuccinate synthase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290950633|gb|EFE00752.1| argininosuccinate synthase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 445
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 26/65 (40%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
+ K+ + FSGG D+S L W + + + GQ ++ + K+ M
Sbjct: 9 LPKSEKVGIAFSGGLDTSAALLWMRQKGAIPCAYTANLGQPDEDDYNAIPRKAKEYGAEM 68
Query: 65 PKWKD 69
+ D
Sbjct: 69 ARLID 73
>gi|242069635|ref|XP_002450094.1| hypothetical protein SORBIDRAFT_05g000440 [Sorghum bicolor]
gi|241935937|gb|EES09082.1| hypothetical protein SORBIDRAFT_05g000440 [Sorghum bicolor]
Length = 584
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DSS + A+ E +
Sbjct: 242 VLLSGGLDSSLVAAVAVRHLAETEAAT 268
>gi|254479264|ref|ZP_05092607.1| NAD synthase family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034802|gb|EEB75533.1| NAD synthase family protein [Carboxydibrachium pacificum DSM 12653]
Length = 543
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLS 39
A+L SGG DS+ A + + V +S
Sbjct: 288 KKAVLGLSGGIDSAVVAVIASEALGKENVLAIS 320
>gi|92119082|ref|YP_578811.1| argininosuccinate synthase [Nitrobacter hamburgensis X14]
gi|119361296|sp|Q1QHE6|ASSY_NITHX RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|91801976|gb|ABE64351.1| argininosuccinate synthase [Nitrobacter hamburgensis X14]
Length = 409
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ KK +L +SGG D+S L W + V T + D GQ ++E + + I
Sbjct: 1 MSKKVEKVVLAYSGGLDTSIILKWLQTTYGAEVVTFTADLGQGEELEPARQKALLLGIKP 60
Query: 63 ---LMPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 ENIFIEDLREEFVRDYVFPM 80
>gi|20807133|ref|NP_622304.1| NAD synthase [Thermoanaerobacter tengcongensis MB4]
gi|20515628|gb|AAM23908.1| NAD synthase [Thermoanaerobacter tengcongensis MB4]
Length = 543
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLS 39
A+L SGG DS+ A + + V +S
Sbjct: 288 KKAVLGLSGGIDSAVVAVIASEALGKENVLAIS 320
>gi|315023077|gb|EFT36090.1| asparagine synthetase (glutamine-hydrolyzing) [Riemerella
anatipestifer RA-YM]
gi|325336316|gb|ADZ12590.1| Asparagine synthase (glutamine-hydrolyzing) [Riemerella
anatipestifer RA-GD]
Length = 629
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 15 FSGGQDS---STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
SGG DS + CL+ +++ ++ T S Y +++ E + V K+I + ++
Sbjct: 268 LSGGVDSSIVTVCLAEEMEQ--KINTFSIGYDKKSFDESDKSKIVAKQIGSIHHQF 321
>gi|224372387|ref|YP_002606759.1| tRNA-specific 2-thiouridylase MnmA [Nautilia profundicola AmH]
gi|223589875|gb|ACM93611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Nautilia profundicola AmH]
Length = 341
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 30/196 (15%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A L+ SGG DS+ + ++ V + Y + ++ K+ L K
Sbjct: 1 MAKRVLVGVSGGVDSAMSVYLLKEQGYDVVGI---YMKMHEGVNHVENVA--KLNRLSKK 55
Query: 67 WKDSLGEDHILPL--AILGDISHSSLTKNV-AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
+ + + + S + + N+ F IF+
Sbjct: 56 LGFEYVIEDVEDEFRKEVYEYFVESYKQGITPNPCAMCNIKIKF-----GIFM----GFL 106
Query: 124 YRLGITNIVIGV---CETDYSGY--PDCRHDTIRAIETAINLGMESHV--TVHTPLMWLK 176
+ G G + ++ Y D D ++ G++ V + PL
Sbjct: 107 EKYGCELAATGHYVRNDGEF-LYQAKDQSKD-----QSYFLFGIKKKVLPKILFPLGEYT 160
Query: 177 KYETWKLAQDIGGQDL 192
K E KLA +IG +
Sbjct: 161 KDEIKKLASEIGLDEF 176
>gi|68536405|ref|YP_251110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium jeikeium K411]
gi|123650729|sp|Q4JUL5|MNMA_CORJK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|68264004|emb|CAI37492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium jeikeium K411]
Length = 395
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
+ SGG DS+ S AL+ V +
Sbjct: 2 RVVAAMSGGVDSAVAASRALEAGHEVIGVH 31
>gi|330465681|ref|YP_004403424.1| sulfate adenylyltransferase subunit 2 [Verrucosispora maris
AB-18-032]
gi|328808652|gb|AEB42824.1| sulfate adenylyltransferase subunit 2 [Verrucosispora maris
AB-18-032]
Length = 303
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF 32
M +++ + +LLFSGG+DS L A F
Sbjct: 23 MREVVAEMERPVLLFSGGKDSIVMLRLAQKAF 54
>gi|320158026|ref|YP_004190404.1| argininosuccinate synthase [Vibrio vulnificus MO6-24/O]
gi|319933338|gb|ADV88201.1| argininosuccinate synthase [Vibrio vulnificus MO6-24/O]
Length = 404
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ ++ +A L LFSGG DSS L +V ++ D G
Sbjct: 10 VQNVASQAKHVLTLFSGGLDSSYLLEILKSSRAKVTAVAIDLG 52
>gi|298384535|ref|ZP_06994095.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_14]
gi|298262814|gb|EFI05678.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_14]
Length = 641
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRV 35
+ KA +A++ SGG DS+ L + FD++
Sbjct: 344 VHTKAKTAVVGISGGLDSTLALLVCVKTFDKL 375
>gi|289581434|ref|YP_003479900.1| argininosuccinate synthase [Natrialba magadii ATCC 43099]
gi|289530987|gb|ADD05338.1| argininosuccinate synthase [Natrialba magadii ATCC 43099]
Length = 409
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 15 FSGGQDSSTCLSWALDR--FDRVETLSFDYGQ 44
FSGG D++ C+ + +D V ++ D GQ
Sbjct: 8 FSGGLDTTVCVPLLEEEYGYDEVIGVTVDVGQ 39
>gi|253567615|ref|ZP_04845026.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_6]
gi|251841688|gb|EES69768.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_6]
Length = 641
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRV 35
+ KA +A++ SGG DS+ L + FD++
Sbjct: 344 VHTKAKTAVVGISGGLDSTLALLVCVKTFDKL 375
>gi|297562417|ref|YP_003681391.1| argininosuccinate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846865|gb|ADH68885.1| argininosuccinate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 482
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
FSGG D+S ++W D+ + D GQ
Sbjct: 18 FSGGLDTSVAVAWMRDKGAVPYAYTADIGQ 47
>gi|226305427|ref|YP_002765385.1| GMP synthetase [Rhodococcus erythropolis PR4]
gi|226184542|dbj|BAH32646.1| GMP synthetase [Rhodococcus erythropolis PR4]
Length = 523
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE--CRLCVRKKIVE 62
A+ SGG DS+ + DR+ + D+ G+R +VE + R V+
Sbjct: 221 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLMRAGERTQVEQDFVAATGARLITVD 280
Query: 63 LMPKWKDSLG 72
+ L
Sbjct: 281 AADTFIGELA 290
>gi|254284393|ref|ZP_04959361.1| argininosuccinate synthase [gamma proteobacterium NOR51-B]
gi|219680596|gb|EED36945.1| argininosuccinate synthase [gamma proteobacterium NOR51-B]
Length = 406
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W D + V T + D GQ +VE + E+
Sbjct: 1 MSSINKVVLAYSGGLDTSVIVRWLQDTYGCEVVTFTADIGQGEEVEPAREKARALGVKEI 60
Query: 64 M 64
Sbjct: 61 Y 61
>gi|158604919|gb|EAT98904.3| thiamine biosynthesis protein:ExsB [Campylobacter concisus 13826]
Length = 329
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
AL LFSGG DS + D+ V L D G
Sbjct: 2 KALALFSGGLDSMLSMKIISDQNIEVVALYMDTG 35
>gi|281356157|ref|ZP_06242650.1| tRNA(Ile)-lysidine synthetase [Victivallis vadensis ATCC BAA-548]
gi|281317526|gb|EFB01547.1| tRNA(Ile)-lysidine synthetase [Victivallis vadensis ATCC BAA-548]
Length = 813
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 15 FSGGQDSSTCLSWALD----RFDRVETLSFDYGQR 45
FSGG DS+ L A R+ + FD+G R
Sbjct: 22 FSGGADSTAALLVARRFQEIFHYRLTAIHFDHGLR 56
>gi|119433784|gb|ABL74944.1| Tlm Orf21 [Streptoalloteichus hindustanus]
Length = 628
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 31/158 (19%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DS++ ++ A R D V + + E E +++
Sbjct: 265 LSGGLDSTSVVATA-ARHDTVTAFTVRFDDPAYDESEVAERTARRLG----------VRH 313
Query: 75 HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
H + H T +Q+N R + + A R +V+G
Sbjct: 314 HQIDSHRADFAHHLRETVWAGESVQENAHGI----AR------YLHSRAIRGHGFKVVLG 363
Query: 135 VCETD--YSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
D ++GYP + + LG+ + T
Sbjct: 364 GEGGDEIFAGYP--------QFQKDLALGLSPDLFAET 393
>gi|29345615|ref|NP_809118.1| NAD synthetase [Bacteroides thetaiotaomicron VPI-5482]
gi|29337507|gb|AAO75312.1| glutamine-dependent NAD+ synthetase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 641
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRV 35
+ KA +A++ SGG DS+ L + FD++
Sbjct: 344 VHTKAKTAVVGISGGLDSTLALLVCVKTFDKL 375
>gi|325695771|gb|EGD37670.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis SK150]
Length = 425
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVE---TL-SFDYGQRNKVELECRLCVRKKIV 61
+ L+ SGG DS T L +D + + ++ QR E + KI
Sbjct: 17 QDHRKVLVAVSGGLDSMTLLQLLIDSQKELAIELAIAHVNHKQR--PESDQEEKALVKIA 74
Query: 62 ELMP 65
E +
Sbjct: 75 EQLG 78
>gi|319950723|ref|ZP_08024619.1| GMP synthase [Dietzia cinnamea P4]
gi|319435601|gb|EFV90825.1| GMP synthase [Dietzia cinnamea P4]
Length = 519
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
A+ SGG DS+ + DR+ + D+G
Sbjct: 216 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG 250
>gi|227509450|ref|ZP_03939499.1| argininosuccinate synthase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191162|gb|EEI71229.1| argininosuccinate synthase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 431
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W D+ V + G
Sbjct: 1 MTENKKVILAYSGGLDTSVAIPWLNDKGYDVVACCINVG 39
>gi|227512153|ref|ZP_03942202.1| argininosuccinate synthase [Lactobacillus buchneri ATCC 11577]
gi|227524117|ref|ZP_03954166.1| argininosuccinate synthase [Lactobacillus hilgardii ATCC 8290]
gi|227084547|gb|EEI19859.1| argininosuccinate synthase [Lactobacillus buchneri ATCC 11577]
gi|227088748|gb|EEI24060.1| argininosuccinate synthase [Lactobacillus hilgardii ATCC 8290]
Length = 431
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ + +L +SGG D+S + W D+ V + G
Sbjct: 1 MTENKKVILAYSGGLDTSVAIPWLNDKGYDVVACCINVG 39
>gi|158422369|ref|YP_001523661.1| argininosuccinate synthase [Azorhizobium caulinodans ORS 571]
gi|172048046|sp|A8IQ54|ASSY_AZOC5 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|158329258|dbj|BAF86743.1| argininosuccinate synthase [Azorhizobium caulinodans ORS 571]
Length = 408
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + +L +SGG D+S L W + V T + D GQ ELE + +
Sbjct: 1 MSRDVKKVVLAYSGGLDTSVILKWLQTTYRCEVVTFTADLGQ--GEELEPARKKAELL 56
>gi|146087041|ref|XP_001465707.1| argininosuccinate synthase [Leishmania infantum JPCM5]
gi|134069807|emb|CAM68133.1| putative argininosuccinate synthase [Leishmania infantum JPCM5]
gi|322499155|emb|CBZ34226.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 418
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
K P +L +SGG D+S + W + + V + GQ E++ KK
Sbjct: 12 KKPRVVLAYSGGLDTSVIIPWLKENYDYEVIACCANVGQ-GAGEIDGLEEKAKKSGA-SK 69
Query: 66 KWKDSLGEDHILPLAI 81
+ L E+++
Sbjct: 70 LYLLDLREEYVTDYIF 85
>gi|118602851|ref|YP_904066.1| hypothetical protein Rmag_0880 [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567790|gb|ABL02595.1| conserved hypothetical protein [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 360
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRK 58
+I K A+ L SGG DS LD+ +E ++F G + + + + +
Sbjct: 11 QSMINKKIKAISLISGGLDSLLSTKLMLDQGIYIEGINFFTGFCVEGHTHAIRKQKKDKL 70
Query: 59 KIVELMPKWKDSLGEDHILPL 79
K + + + HI+ +
Sbjct: 71 KRNNALWVAEQLGIKLHIIDV 91
>gi|325088768|gb|EGC42078.1| asparagine synthetase [Ajellomyces capsulatus H88]
Length = 568
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DSS + A R + LS
Sbjct: 224 VLLSGGLDSSLVAAIAQRETQRQQELS 250
>gi|323702070|ref|ZP_08113738.1| NAD+ synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323532952|gb|EGB22823.1| NAD+ synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 243
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDR 34
A A++ SGG DS+ + F
Sbjct: 22 AKGAVVGLSGGIDSAVVAALCKRAFPE 48
>gi|307265627|ref|ZP_07547181.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
wiegelii Rt8.B1]
gi|306919425|gb|EFN49645.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 613
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 14 LFSGGQDSSTCLSWA----LDRFDRVETLSFDY 42
L SGG DS+ +A + ++ T S DY
Sbjct: 263 LLSGGLDSTAVSFFANEELKQKGQKLITYSVDY 295
>gi|262172949|ref|ZP_06040626.1| NAD synthetase [Vibrio mimicus MB-451]
gi|261890307|gb|EEY36294.1| NAD synthetase [Vibrio mimicus MB-451]
Length = 276
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 61/204 (29%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 31 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTSEYQFIAVRLPYGEQKDEAE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + + + N+
Sbjct: 91 AQLALSFIRPSHSVSVNIKAGVDGLHAASQQALANTGLV-PSDPAKIDFIKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + LA+ +G +
Sbjct: 188 APLYGLNKRQVRLLAETLGAPAQL 211
>gi|240280048|gb|EER43552.1| asparagine synthetase [Ajellomyces capsulatus H143]
Length = 486
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DSS + A R + LS
Sbjct: 229 VLLSGGLDSSLVAAIAQRETQRQQELS 255
>gi|229506630|ref|ZP_04396139.1| NAD synthetase [Vibrio cholerae BX 330286]
gi|229510572|ref|ZP_04400052.1| NAD synthetase [Vibrio cholerae B33]
gi|229517296|ref|ZP_04406741.1| NAD synthetase [Vibrio cholerae RC9]
gi|229526171|ref|ZP_04415575.1| NAD synthetase [Vibrio cholerae bv. albensis VL426]
gi|229605107|ref|YP_002875811.1| NAD synthetase [Vibrio cholerae MJ-1236]
gi|229336329|gb|EEO01347.1| NAD synthetase [Vibrio cholerae bv. albensis VL426]
gi|229345332|gb|EEO10305.1| NAD synthetase [Vibrio cholerae RC9]
gi|229353017|gb|EEO17957.1| NAD synthetase [Vibrio cholerae B33]
gi|229356981|gb|EEO21899.1| NAD synthetase [Vibrio cholerae BX 330286]
gi|229371593|gb|ACQ62015.1| NAD synthetase [Vibrio cholerae MJ-1236]
Length = 285
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 62/206 (30%), Gaps = 36/206 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 40 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGEQKDEDE 99
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + + + N+
Sbjct: 100 AQLALSFIRPTHSVSVNIKAGVDGLHAASHHALANTGL-IPSDPAKVDFIKGNVK----- 153
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 154 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 196
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNL 195
PL L K + LA+ +G + +
Sbjct: 197 APLFGLNKRQVRLLAKTLGAPEQLVY 222
>gi|225560489|gb|EEH08770.1| asparagine synthetase [Ajellomyces capsulatus G186AR]
Length = 568
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DSS + A R + LS
Sbjct: 224 VLLSGGLDSSLVAAIAQRETQRQQELS 250
>gi|154278679|ref|XP_001540153.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413738|gb|EDN09121.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 269
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+L SGG DSS + A R + LS
Sbjct: 211 VLLSGGLDSSLVAAIAQRETQRQQELS 237
>gi|149065692|gb|EDM15565.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 166
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ + SGG DS+ R +V +
Sbjct: 1 MSALRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|145641009|ref|ZP_01796590.1| argininosuccinate synthase [Haemophilus influenzae R3021]
gi|145274170|gb|EDK14035.1| argininosuccinate synthase [Haemophilus influenzae 22.4-21]
Length = 72
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+ K + FSGG D+S L W + + + GQ
Sbjct: 7 QSLPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQ 48
>gi|320334320|ref|YP_004171031.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211]
gi|319755609|gb|ADV67366.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211]
Length = 529
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPK 66
+ L+ SGG DS L A + RV +FD +++ + V + + +
Sbjct: 17 RAVLVAVSGGADSVALLLGAHEAGARVVAATFD----HQLRADSAQDVAFVQDVCARLGV 72
Query: 67 WKDSLGED 74
+ G D
Sbjct: 73 PCEVGGAD 80
>gi|296269998|ref|YP_003652630.1| argininosuccinate synthase [Thermobispora bispora DSM 43833]
gi|296092785|gb|ADG88737.1| argininosuccinate synthase [Thermobispora bispora DSM 43833]
Length = 399
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ 44
A +L +SGG D+S + A V ++ D GQ
Sbjct: 1 MADRVVLAYSGGLDTSVAIPYLAEKMGAEVIAVAVDVGQ 39
>gi|229514701|ref|ZP_04404162.1| NAD synthetase [Vibrio cholerae TMA 21]
gi|229348681|gb|EEO13639.1| NAD synthetase [Vibrio cholerae TMA 21]
Length = 285
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 62/206 (30%), Gaps = 36/206 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 40 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGEQKDEDE 99
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + + + N+
Sbjct: 100 AQLALSFIRPTHSVSVNIKAGVDGLHAASHHALANTGL-IPSDPAKVDFIKGNVK----- 153
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 154 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 196
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNL 195
PL L K + LA+ +G + +
Sbjct: 197 APLFGLNKRQVRLLAKTLGAPEQLVY 222
>gi|188587455|ref|YP_001919000.1| ExsB family protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179352142|gb|ACB86412.1| ExsB family protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 278
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 47/193 (24%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ A++ FSGG DS+ L A + D+V ++ + ++ ++
Sbjct: 24 LSTMDGAVVAFSGGVDSTLLLKVAQEVLSDQVLAVT-----------STSETIPERELDR 72
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR----NIIFLVFA 119
+ + +G H + T+ + + N P R
Sbjct: 73 AKELAEDIGAKH-----------KTIYTEEILQEEFRKNP-----PNRCYYCKQELFSHL 116
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKK 177
+A G + ++ G D + R +E A L V +PL K
Sbjct: 117 WEIAKSYGFSYVLDGSNYDDGGDF---RPG----LEAAAKL------QVQSPLKETGFTK 163
Query: 178 YETWKLAQDIGGQ 190
+ +L++++G
Sbjct: 164 EDVRQLSKELGLP 176
>gi|89073756|ref|ZP_01160270.1| NAD(+) synthetase [Photobacterium sp. SKA34]
gi|89050531|gb|EAR56023.1| NAD(+) synthetase [Photobacterium sp. SKA34]
Length = 278
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 57/206 (27%), Gaps = 36/206 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC--LSWALDRF---------DRVETLSFDYGQRNKVEL 50
+ + +L+L SGG DS+TC L+ + + YG E
Sbjct: 31 KLKQSGCKSLVLGISGGVDSTTCGRLAQLAVNGLNQVSNSNDYQFIAVRLPYG-----EQ 85
Query: 51 ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
+ + + + P S+ + + T + + V
Sbjct: 86 QDEDEAQLALHFIQPSHSVSVNIKKGVDATHASTLLSLENTGLIPSDKAKVDFVKGNVKA 145
Query: 111 RNIIFLVFAATLAYRLGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R + + I +V G V TD+S +
Sbjct: 146 R-TRMIA-------QYEIAGLVGGLVIGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNL 195
PL L K + + +G + +
Sbjct: 188 APLFGLNKRQVRAIGAKLGAPEQLVY 213
>gi|306835899|ref|ZP_07468893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium accolens ATCC 49726]
gi|304568224|gb|EFM43795.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium accolens ATCC 49726]
Length = 361
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS + A++ V +
Sbjct: 2 RVLVAMSGGVDSSVAAARAVEAGHDVVGVH 31
>gi|296117506|ref|ZP_06836090.1| asparagine synthase [Corynebacterium ammoniagenes DSM 20306]
gi|295969237|gb|EFG82478.1| asparagine synthase [Corynebacterium ammoniagenes DSM 20306]
Length = 632
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A + T + + + E++ + I
Sbjct: 264 LSGGIDSTAIAALAKRHNPDLLTFTTGFEREGYSEVDVAAESAQAIGA 311
>gi|237714361|ref|ZP_04544842.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|229445525|gb|EEO51316.1| conserved hypothetical protein [Bacteroides sp. D1]
Length = 353
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 15 FSGGQDSS-TCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELMPKWKD 69
SGG DS+ TCL ++ + ++ D Q + EL R+ + + + +K+
Sbjct: 4 MSGGIDSTATCL-MLQEQGYEIVGVTMRVWGDEPQDAR-ELAERMGIEHYVADERIPFKE 61
Query: 70 SLGEDHI 76
++ ++ I
Sbjct: 62 TIVKNFI 68
>gi|206896038|ref|YP_002247576.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coprothermobacter proteolyticus DSM 5265]
gi|206738655|gb|ACI17733.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Coprothermobacter proteolyticus DSM 5265]
Length = 347
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFD 41
SGG DS+ L + V + +
Sbjct: 7 LSGGIDSTVSLLRLKEEGHHVTAVFLN 33
>gi|157413817|ref|YP_001484683.1| hypothetical protein P9215_14841 [Prochlorococcus marinus str. MIT
9215]
gi|157388392|gb|ABV51097.1| Hypothetical protein P9215_14841 [Prochlorococcus marinus str. MIT
9215]
Length = 421
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLS 39
++L SGG DS+ + +E ++
Sbjct: 150 VILLSGGLDSTVVAYNSSKYLSNIEFIT 177
>gi|189030688|sp|Q4A5Q7|THII_MYCS5 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
carrier protein ThiS sulfurtransferase; AltName:
Full=Thiamine biosynthesis protein thiI; AltName:
Full=tRNA 4-thiouridine synthase
gi|144575142|gb|AAZ43914.2| thiamine biosynthesis protein [Mycoplasma synoviae 53]
Length = 376
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L L SGG DS + R +V+ L+F
Sbjct: 166 KVLHLISGGFDSPVAAYLLMKRGFKVDFLTF 196
>gi|71894517|ref|YP_278625.1| thiamine biosynthesis protein [Mycoplasma synoviae 53]
Length = 380
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L L SGG DS + R +V+ L+F
Sbjct: 170 KVLHLISGGFDSPVAAYLLMKRGFKVDFLTF 200
>gi|300728582|ref|ZP_07061940.1| sulfate adenylyltransferase, small subunit [Prevotella bryantii
B14]
gi|299774151|gb|EFI70785.1| sulfate adenylyltransferase, small subunit [Prevotella bryantii
B14]
Length = 301
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCVRKKIVE 62
+LFSGG+DS A F + L D G + L+ R + +K+
Sbjct: 32 ILFSGGKDSIVVTYLAYKAFYPAKIPFQLLHIDTGHNFQETLDYRDALVEKLGA 85
>gi|282855633|ref|ZP_06264947.1| NAD+ synthetase [Pyramidobacter piscolens W5455]
gi|282586563|gb|EFB91817.1| NAD+ synthetase [Pyramidobacter piscolens W5455]
Length = 244
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 59/195 (30%), Gaps = 32/195 (16%)
Query: 1 MNDIIKK--APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
M+ II A A++ SGG DS+ + ++ Y + + L+
Sbjct: 15 MSQIISASGAGGAVVGLSGGIDSAVAAALLKGALGTERVITV-YMPCHSIPLDGEHARLT 73
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ L E + + +G + S +K + + +
Sbjct: 74 AEALGLKMLTVDLSETYDVYRRTIGRVMEPSALAGANIKPR-------------LRMITV 120
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
++A LG G + GY + G + PL L K
Sbjct: 121 -YSIAQTLGYLVCGTGNKDELTVGY------FTK-------YGDGG--SDFMPLADLTKA 164
Query: 179 ETWKLAQDIGGQDLV 193
E +A++ G V
Sbjct: 165 EVRAIARETGVPPPV 179
>gi|168016344|ref|XP_001760709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688069|gb|EDQ74448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 603
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 8/69 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL--------SFDYGQRNKVELECRLCVRKKIVELM 64
+L SGG DSS S A + + SF G +L+ V K I
Sbjct: 235 VLLSGGLDSSLVASVAARHLAETKAVRIWGNELHSFCVGLEGSPDLKAAREVAKYIGTRH 294
Query: 65 PKWKDSLGE 73
++ ++ E
Sbjct: 295 HEFNFTVQE 303
>gi|187250509|ref|YP_001874991.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Elusimicrobium minutum Pei191]
gi|186970669|gb|ACC97654.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Elusimicrobium minutum Pei191]
Length = 354
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L+ SGG DSS + D+ V +
Sbjct: 2 KILVGLSGGVDSSLTAALLKDKGYEVTGAT 31
>gi|3372|emb|CAA30106.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 57
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 7 KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ + L +SGG D+S L+W LD+ V + GQ + + + + KI
Sbjct: 1 MSKGKVCLAYSGGLDTSVILAWLLDQATEVVAFMANVGQ--EEDFDAAKVLALKIGA 55
>gi|328945185|gb|EGG39340.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis SK1087]
Length = 425
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVE---TL-SFDYGQRNKVELECRLCVRKKIV 61
+ L+ SGG DS T L +D + + ++ QR E + KI
Sbjct: 17 QDHQKVLVAVSGGLDSMTLLQLLIDSQKELAIELAIAHVNHKQR--PESDQEEKALVKIA 74
Query: 62 ELMP 65
E +
Sbjct: 75 EQLG 78
>gi|325689365|gb|EGD31371.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis SK115]
Length = 425
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRVE---TL-SFDYGQRNKVELECRLCVRKKIV 61
+ L+ SGG DS T L +D + + ++ QR E + KI
Sbjct: 17 QDHQKVLVAVSGGLDSMTLLQLLIDSQKELAIELAIAHVNHKQR--PESDQEEKALVKIA 74
Query: 62 ELMP 65
E +
Sbjct: 75 EQLG 78
>gi|241956978|ref|XP_002421209.1| tRNA(Ile)-lysidine synthase, putative [Candida dubliniensis CD36]
gi|223644552|emb|CAX41370.1| tRNA(Ile)-lysidine synthase, putative [Candida dubliniensis CD36]
Length = 479
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 5/104 (4%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
+ SGG DS L+W L + + ++ D+ R + E + +
Sbjct: 21 PKKVAVALSGGPDSM-LLTWLLSQCQFEIYAITIDHKYRTESSREALAVHERVKNWNLNH 79
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTF 107
SL + L + + K Q + +P F
Sbjct: 80 IIKSLDYPAGVDPTKLNNFEEVAREKRYEAMAQVCYEKEIPVLF 123
>gi|226354886|ref|YP_002784626.1| argininosuccinate synthase [Deinococcus deserti VCD115]
gi|259585353|sp|C1CXR6|ASSY_DEIDV RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|226316876|gb|ACO44872.1| putative Argininosuccinate synthase (Citrulline--aspartate
ligase) [Deinococcus deserti VCD115]
Length = 408
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELM 64
+L +SGG D+S L W +R V + D GQ ++VE E R+ +
Sbjct: 3 KDKIVLAYSGGLDTSIILKWLQTERNYDVVCFTADLGQGDEVE-EARVKALNTGAVAAYA 61
Query: 65 PKWKDSLGEDHILPL 79
++ D++ P+
Sbjct: 62 LDLREEFVRDYVFPM 76
>gi|182420268|ref|ZP_02951497.1| tRNA methyl transferase [Clostridium butyricum 5521]
gi|237666593|ref|ZP_04526578.1| tRNA methyl transferase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182375863|gb|EDT73455.1| tRNA methyl transferase [Clostridium butyricum 5521]
gi|237657792|gb|EEP55347.1| tRNA methyl transferase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 329
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
AL + SGG DS ++ V + F
Sbjct: 3 RALAMISGGLDSILAAKLIKEQGIDVIGICFR 34
>gi|126658620|ref|ZP_01729766.1| asparagine synthetase B [Cyanothece sp. CCY0110]
gi|126620057|gb|EAZ90780.1| asparagine synthetase B [Cyanothece sp. CCY0110]
Length = 499
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSF 40
SGG DSS + A + T S
Sbjct: 226 LSGGLDSSIIAAIAKKHKSELHTFSV 251
>gi|118576259|ref|YP_876002.1| asparagine synthase (glutamine-hydrolyzing) [Cenarchaeum symbiosum
A]
gi|118194780|gb|ABK77698.1| asparagine synthase (glutamine-hydrolyzing) [Cenarchaeum symbiosum
A]
Length = 261
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 20/133 (15%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
+ FSGG DS+ + + VE L+ + + +
Sbjct: 22 VAFSGGVDSALVGAVCKNMGYEVELLTV-------------GFAGSQDLSFAAEAAPEDT 68
Query: 73 EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
H L + G + ++ ++ L ++ N I + A LA+ + ++
Sbjct: 69 PHHTLEIDQSGFDKVARSVEDTMGASPEDTL--SW--YENGIAFHYVAVLAHENDLHTVL 124
Query: 133 IGVCETD--YSGY 143
D + GY
Sbjct: 125 T-ANGIDELFCGY 136
>gi|154245324|ref|YP_001416282.1| NAD synthetase [Xanthobacter autotrophicus Py2]
gi|154159409|gb|ABS66625.1| NAD+ synthetase [Xanthobacter autotrophicus Py2]
Length = 569
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 12 LLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELE 51
++L SGG DS+ C + A+D +RV + Y R E
Sbjct: 305 VVLGLSGGIDSAICAAMAVDALGPERVHCIMLPY--RYTSEES 345
>gi|67923153|ref|ZP_00516642.1| Asparagine synthase, glutamine-hydrolyzing [Crocosphaera watsonii
WH 8501]
gi|67854995|gb|EAM50265.1| Asparagine synthase, glutamine-hydrolyzing [Crocosphaera watsonii
WH 8501]
Length = 500
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSF 40
SGG DSS + A + T S
Sbjct: 227 LSGGLDSSIIAAIAKKHKSELHTFSV 252
>gi|308062320|gb|ADO04208.1| GMP synthase [Helicobacter pylori Cuz20]
Length = 508
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 1 MNDIIKKAPSALLLF--SGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
M + +K +A +L SGG DS+ T L A+ D + + D+G K E E
Sbjct: 200 MARLKEKIANAKVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKEKVQA 257
Query: 56 VRKKI 60
+ K +
Sbjct: 258 MFKDL 262
>gi|186513287|ref|NP_001119047.1| arginosuccinate synthase family [Arabidopsis thaliana]
gi|332659569|gb|AEE84969.1| argininosuccinate synthase [Arabidopsis thaliana]
Length = 450
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
K +L +SGG D+S + W + + V + D GQ ELE K
Sbjct: 95 KLKKVVLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQ-GIKELEGLEQKAKA 147
>gi|4678262|emb|CAB41123.1| argininosuccinate synthase-like protein [Arabidopsis thaliana]
gi|7269334|emb|CAB79393.1| argininosuccinate synthase-like protein [Arabidopsis thaliana]
Length = 498
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
K +L +SGG D+S + W + + V + D GQ ELE K
Sbjct: 124 KLKKVVLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQ-GIKELEGLEQKAKA 176
>gi|22328910|ref|NP_194214.2| arginosuccinate synthase family [Arabidopsis thaliana]
gi|78099761|sp|Q9SZX3|ASSY_ARATH RecName: Full=Argininosuccinate synthase, chloroplastic; AltName:
Full=Citrulline--aspartate ligase; Flags: Precursor
gi|17529036|gb|AAL38728.1| putative argininosuccinate synthase [Arabidopsis thaliana]
gi|20259085|gb|AAM14258.1| putative argininosuccinate synthase [Arabidopsis thaliana]
gi|332659568|gb|AEE84968.1| argininosuccinate synthase [Arabidopsis thaliana]
Length = 494
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
K +L +SGG D+S + W + + V + D GQ ELE K
Sbjct: 95 KLKKVVLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQ-GIKELEGLEQKAKA 147
>gi|332886264|gb|EGK06508.1| hypothetical protein HMPREF9456_00382 [Dysgonomonas mossii DSM
22836]
Length = 662
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRV 35
K A++ SGG DS+ L FDR+
Sbjct: 366 KIQKAVIGVSGGLDSTLALLVLAKTFDRL 394
>gi|317500695|ref|ZP_07958913.1| GMP synthase domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|316897889|gb|EFV19942.1| GMP synthase domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
Length = 430
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + + ++ + ++G
Sbjct: 136 RKVLLALSGGVDSSVVAAMLIKAIGQQLVCVHVNHG 171
>gi|257054547|ref|YP_003132379.1| GMP synthase [Saccharomonospora viridis DSM 43017]
gi|256584419|gb|ACU95552.1| GMP synthase (glutamine-hydrolyzing) [Saccharomonospora viridis DSM
43017]
Length = 514
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 37/104 (35%), Gaps = 15/104 (14%)
Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDY-----GQRNKVELE---------CRLC 55
A+ SGG DS+ + DR+ + D+ G+R +VE + +
Sbjct: 217 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERAQVERDFVAATGVKLVTVD 276
Query: 56 VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
++ + + D + I+ + ++ A ++
Sbjct: 277 ASERFLSALAGVTDPEQKRKIIGREFIRVFEQAARDVKAAGDVE 320
>gi|258653420|ref|YP_003202576.1| asparagine synthase (glutamine-hydrolyzing) [Nakamurella
multipartita DSM 44233]
gi|258556645|gb|ACV79587.1| asparagine synthase (glutamine-hydrolyzing) [Nakamurella
multipartita DSM 44233]
Length = 634
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 15/92 (16%)
Query: 1 MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
M+D + K A + SGG DS+ + A + L+F G E E V
Sbjct: 248 MDDSVAKHMRADVTVGAFLSGGIDSTAIAALAKR--YNPDLLTFTTG----FEREGFSEV 301
Query: 57 RKKIVELMPKWKDSLGEDHILPLAILGDISHS 88
++ + ++G +HI+ +++ +
Sbjct: 302 -----DVAAESAAAIGVEHIVRTVSEQELTST 328
>gi|254479732|ref|ZP_05093019.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034329|gb|EEB75116.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
Length = 310
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 13/41 (31%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++ ++ SGG+DS V D G
Sbjct: 42 KMLPPKGRVVVAISGGKDSLVTAYVLKRLGYEVLGFFVDLG 82
>gi|188589844|ref|YP_001922242.1| argininosuccinate synthase [Clostridium botulinum E3 str. Alaska
E43]
gi|229889869|sp|B2UYI0|ASSY_CLOBA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|188500125|gb|ACD53261.1| argininosuccinate synthase [Clostridium botulinum E3 str. Alaska
E43]
Length = 407
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S + W + + V + + GQ+++++ ++ +L
Sbjct: 1 MNKLNKVILAYSGGLDTSIIIPWLKENYNCEVIAVCGNVGQKDELDGLEEKAIKTGASKL 60
Query: 64 -MPKWKDSLGEDHILPLAILGDI 85
M ED+I P G I
Sbjct: 61 YMEDLTKEFVEDYIFPTIQAGAI 83
>gi|297620201|ref|YP_003708306.1| ATP binding protein [Methanococcus voltae A3]
gi|297379178|gb|ADI37333.1| ATP binding protein [Methanococcus voltae A3]
Length = 223
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 14 LFSGGQDSSTCLSWALDRFDRV 35
L+SGG+DS+ L WAL V
Sbjct: 6 LYSGGKDSTYALYWALQNGHDV 27
>gi|153815930|ref|ZP_01968598.1| hypothetical protein RUMTOR_02175 [Ruminococcus torques ATCC 27756]
gi|331089830|ref|ZP_08338723.1| GMP synthase 2 [Lachnospiraceae bacterium 3_1_46FAA]
gi|145846749|gb|EDK23667.1| hypothetical protein RUMTOR_02175 [Ruminococcus torques ATCC 27756]
gi|330403527|gb|EGG83085.1| GMP synthase 2 [Lachnospiraceae bacterium 3_1_46FAA]
Length = 430
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
LL SGG DSS + + ++ + ++G
Sbjct: 136 RKVLLALSGGVDSSVVAAMLIKAIGQQLVCVHVNHG 171
>gi|323698543|ref|ZP_08110455.1| PP-loop domain protein [Desulfovibrio sp. ND132]
gi|323458475|gb|EGB14340.1| PP-loop domain protein [Desulfovibrio desulfuricans ND132]
Length = 305
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 18/52 (34%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL 54
+ L+ SGG+DS + + V L D G N E R
Sbjct: 42 KMFTHEDRILVALSGGKDSLALMLELKLQGYDVTGLHIDLGIPNSSEKARRK 93
>gi|304392676|ref|ZP_07374616.1| argininosuccinate synthase [Ahrensia sp. R2A130]
gi|303295306|gb|EFL89666.1| argininosuccinate synthase [Ahrensia sp. R2A130]
Length = 417
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFD-RVETLSFDYGQRN---KVELECRLC 55
M I K ++L +SGG D+S L W + V T + D GQ ELE
Sbjct: 1 MAKIKKGDVKKVVLAYSGGLDTSIILKWLQTEYGAEVVTFTADLGQSEIEGGKELEEAKR 60
Query: 56 VRKKI 60
+ +
Sbjct: 61 KAENL 65
>gi|167945139|ref|ZP_02532213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 145
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
MN ++ SGG DSS L++ +VE L
Sbjct: 1 MNHP---REKIIVGMSGGVDSSVAALLLLEQGYQVEGL 35
>gi|87198574|ref|YP_495831.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Novosphingobium aromaticivorans DSM 12444]
gi|87134255|gb|ABD24997.1| GMP synthase (glutamine-hydrolyzing) [Novosphingobium
aromaticivorans DSM 12444]
Length = 540
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 29/190 (15%)
Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
+ SGG DS+ + D++ + D+G R+ +++V L
Sbjct: 244 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHG-------LMRMGEAEQVVSLFRNHY 296
Query: 69 DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
+ + LG ++ + + + TF+ +F A G
Sbjct: 297 NIPLVHKDVSALFLGGLAG-----VTDPEAKRKFIGKTFID----VFEAEAR---QVGGA 344
Query: 129 TNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
+ G D ++G P TI++ L ++ + PL L K E
Sbjct: 345 DFLAQGTLYPDVIESVSFTGGP---SVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRA 401
Query: 183 LAQDIGGQDL 192
L +++G ++
Sbjct: 402 LGRELGLPEI 411
>gi|78224058|ref|YP_385805.1| NAD synthetase [Geobacter metallireducens GS-15]
gi|78195313|gb|ABB33080.1| NH(3)-dependent NAD(+) synthetase [Geobacter metallireducens
GS-15]
Length = 271
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 6/72 (8%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A+L SGG DS+ A + + + Y R + E +
Sbjct: 27 RKAVLGLSGGIDSALVAYLAAEALGPENIHACIMPY--RTSNPESEAH--ARLAAEHLGI 82
Query: 67 WKDSLGEDHILP 78
+ ++
Sbjct: 83 HYQVIDITPMID 94
>gi|15600976|ref|NP_232606.1| NAD synthetase [Vibrio cholerae O1 biovar eltor str. N16961]
gi|121586713|ref|ZP_01676496.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 2740-80]
gi|121727752|ref|ZP_01680840.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae V52]
gi|147671819|ref|YP_001215857.1| NAD synthetase [Vibrio cholerae O395]
gi|153816786|ref|ZP_01969453.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae NCTC 8457]
gi|153822638|ref|ZP_01975305.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae B33]
gi|153825045|ref|ZP_01977712.1| NAD+ synthetase [Vibrio cholerae MZO-2]
gi|153829640|ref|ZP_01982307.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 623-39]
gi|227811829|ref|YP_002811839.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae M66-2]
gi|254225213|ref|ZP_04918826.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae V51]
gi|254850594|ref|ZP_05239944.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae MO10]
gi|255745986|ref|ZP_05419933.1| NAD synthetase [Vibrio cholera CIRS 101]
gi|262163456|ref|ZP_06031202.1| NAD synthetase [Vibrio cholerae INDRE 91/1]
gi|262167357|ref|ZP_06035066.1| NAD synthetase [Vibrio cholerae RC27]
gi|262192109|ref|ZP_06050271.1| NAD synthetase [Vibrio cholerae CT 5369-93]
gi|297579673|ref|ZP_06941600.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae RC385]
gi|298500059|ref|ZP_07009865.1| NAD+ synthetase [Vibrio cholerae MAK 757]
gi|25090803|sp|Q9KMW1|NADE_VIBCH RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|189030737|sp|A5EYT7|NADE_VIBC3 RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|254766724|sp|C3LUM7|NADE_VIBCM RecName: Full=NH(3)-dependent NAD(+) synthetase
gi|9657599|gb|AAF96119.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549010|gb|EAX59047.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 2740-80]
gi|121629969|gb|EAX62379.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae V52]
gi|125622312|gb|EAZ50633.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae V51]
gi|126512589|gb|EAZ75183.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae NCTC 8457]
gi|126519837|gb|EAZ77060.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae B33]
gi|146314202|gb|ABQ18742.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae O395]
gi|148874868|gb|EDL73003.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 623-39]
gi|149741370|gb|EDM55404.1| NAD+ synthetase [Vibrio cholerae MZO-2]
gi|227010971|gb|ACP07182.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae M66-2]
gi|227014877|gb|ACP11086.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae O395]
gi|254846299|gb|EET24713.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae MO10]
gi|255735740|gb|EET91138.1| NAD synthetase [Vibrio cholera CIRS 101]
gi|262024241|gb|EEY42933.1| NAD synthetase [Vibrio cholerae RC27]
gi|262028023|gb|EEY46682.1| NAD synthetase [Vibrio cholerae INDRE 91/1]
gi|262032020|gb|EEY50596.1| NAD synthetase [Vibrio cholerae CT 5369-93]
gi|297535319|gb|EFH74153.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae RC385]
gi|297542040|gb|EFH78091.1| NAD+ synthetase [Vibrio cholerae MAK 757]
Length = 276
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 62/206 (30%), Gaps = 36/206 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 31 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGEQKDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + + + N+
Sbjct: 91 AQLALSFIRPTHSVSVNIKAGVDGLHAASHHALANTGL-IPSDPAKVDFIKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNL 195
PL L K + LA+ +G + +
Sbjct: 188 APLFGLNKRQVRLLAKTLGAPEQLVY 213
>gi|315426474|dbj|BAJ48107.1| ATP-binding protein [Candidatus Caldiarchaeum subterraneum]
Length = 225
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 11/59 (18%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETL-----------SFDYGQRNKVELECRLCVRKKIV 61
LFSGG+DS+ + A + VE L F Y + L+ R I+
Sbjct: 6 LFSGGKDSTYAIYLAENMGHVVEVLLTFLPQSIDSYLFHYPNIHLTPLQAEAMGRHHII 64
>gi|282880951|ref|ZP_06289642.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prevotella timonensis CRIS 5C-B1]
gi|281305174|gb|EFA97243.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prevotella timonensis CRIS 5C-B1]
Length = 358
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
MN K +L SGG DSS + + + + G + E +C
Sbjct: 1 MNIDEIKDKRIAVLLSGGVDSSVVVYELVRMGVQPDCFYIKIGPEEQEEWDC 52
>gi|220926736|ref|YP_002502038.1| asparagine synthase [Methylobacterium nodulans ORS 2060]
gi|219951343|gb|ACL61735.1| asparagine synthase [Methylobacterium nodulans ORS 2060]
Length = 470
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
L SGG DSS L+ A R V +
Sbjct: 214 CLISGGLDSSLVLALAKARKPDVVAYT 240
>gi|303245052|ref|ZP_07331372.1| adenylosuccinate lyase [Methanothermococcus okinawensis IH1]
gi|302484571|gb|EFL47515.1| adenylosuccinate lyase [Methanothermococcus okinawensis IH1]
Length = 448
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 35 VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
V + F YG + E+ +K++E+ + GE I+P+ +I+ + TK V
Sbjct: 3 VHPIDFRYGSKEMKEVWEEETKLQKMLEVEAAIARAQGELGIIPMEAAEEINRKASTKYV 62
Query: 95 AMKIQDN 101
++
Sbjct: 63 KLERAKE 69
>gi|255075653|ref|XP_002501501.1| asparagine synthase [Micromonas sp. RCC299]
gi|226516765|gb|ACO62759.1| asparagine synthase [Micromonas sp. RCC299]
Length = 803
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
+LFSGG DS+ L+ A+ V +
Sbjct: 289 VLFSGGVDSTALLAVAVRIGIPVVAAT 315
>gi|118577168|ref|YP_876911.1| GMP synthase, PP-ATPase domain/subunit [Cenarchaeum symbiosum A]
gi|118195689|gb|ABK78607.1| GMP synthase, PP-ATPase domain/subunit [Cenarchaeum symbiosum A]
Length = 507
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 12 LLLFSGGQDSS-TCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKI 60
L SGG DS+ T L DR++ + D G R+ E E +++
Sbjct: 214 LCGVSGGIDSTVTALLIHKAVGDRLKCVFVDNGLLRHNEEAEVERIFKEEF 264
>gi|322707932|gb|EFY99510.1| asparagine synthetase [Metarhizium anisopliae ARSEF 23]
Length = 579
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 13 LLFSGGQDSSTCLSWALDR 31
+L SGG DSS + A
Sbjct: 233 VLLSGGLDSSLVAAIAQRE 251
>gi|319440221|ref|ZP_07989377.1| asparagine synthase [Corynebacterium variabile DSM 44702]
Length = 651
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 18/46 (39%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+ + A + T + + + E++ + I
Sbjct: 278 LSGGIDSTAIAALAKQHNPDLITFTTGFEREGYSEVDVAAESAEAI 323
>gi|289618859|emb|CBI54684.1| unnamed protein product [Sordaria macrospora]
Length = 581
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 13 LLFSGGQDSSTCLSWALDR 31
+L SGG DSS + A
Sbjct: 233 VLLSGGLDSSLVAAIAQRE 251
>gi|282861535|ref|ZP_06270599.1| NAD+ synthetase [Streptomyces sp. ACTE]
gi|282563351|gb|EFB68889.1| NAD+ synthetase [Streptomyces sp. ACTE]
Length = 584
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSF--DYGQRNKV----ELECRLCVRKKI 60
S L+ SGG DS+ + A D + V +S Y + EL R + +
Sbjct: 326 RSVLIGLSGGIDSALVAAIACDALGPENVYGVSMPSKYSSDHSKGDAAELARRTGLNYRT 385
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
V + + +GE + LA S T +A+ Q+ +
Sbjct: 386 VSIEAMFDAYMGELGLTGLAEENLQSRLRGTTLMAISNQEGQI 428
>gi|187932723|ref|YP_001887300.1| argininosuccinate synthase [Clostridium botulinum B str. Eklund
17B]
gi|229889870|sp|B2TQ23|ASSY_CLOBB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|187720876|gb|ACD22097.1| argininosuccinate synthase [Clostridium botulinum B str. Eklund
17B]
Length = 407
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ K +L +SGG D+S + W + + V + + GQ+++++ ++ +L
Sbjct: 1 MNKLNKVILAYSGGLDTSIIIPWLKENYNCEVIAVCGNVGQKDELDGLEEKAIKTGASKL 60
Query: 64 -MPKWKDSLGEDHILPLAILGDI 85
+ ED+I P G I
Sbjct: 61 YIEDLTKEFVEDYIFPTIQAGAI 83
>gi|156043291|ref|XP_001588202.1| hypothetical protein SS1G_10649 [Sclerotinia sclerotiorum 1980]
gi|154695036|gb|EDN94774.1| hypothetical protein SS1G_10649 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 581
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 13 LLFSGGQDSSTCLSWALDR 31
+L SGG DSS + A
Sbjct: 233 VLLSGGLDSSLVAAIAQRE 251
>gi|149198953|ref|ZP_01875994.1| argininosuccinate synthase [Lentisphaera araneosa HTCC2155]
gi|149137948|gb|EDM26360.1| argininosuccinate synthase [Lentisphaera araneosa HTCC2155]
Length = 411
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
K + SGG DS T ++ V S D GQ
Sbjct: 7 KGKKIGICVSGGLDSKTVTKRLMEEGLDVVCFSADLGQ 44
>gi|85100385|ref|XP_960949.1| asparagine synthetase 2 [Neurospora crassa OR74A]
gi|28922483|gb|EAA31713.1| asparagine synthetase 2 [Neurospora crassa OR74A]
gi|28950164|emb|CAD71032.1| probable asparagine synthase [Neurospora crassa]
Length = 581
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 13 LLFSGGQDSSTCLSWALDR 31
+L SGG DSS + A
Sbjct: 233 VLLSGGLDSSLVAAIAQRE 251
>gi|297799514|ref|XP_002867641.1| arginosuccinate synthase family [Arabidopsis lyrata subsp. lyrata]
gi|297313477|gb|EFH43900.1| arginosuccinate synthase family [Arabidopsis lyrata subsp. lyrata]
Length = 495
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE--- 62
K +L +SGG D+S + W + + V + D GQ ELE K
Sbjct: 96 KLRKVVLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQ-GIKELEGLEQKAKASGASQL 154
Query: 63 LMPKWKDSLGEDHILPLAILGDI 85
++ + +D+I P G I
Sbjct: 155 VVKDLTEEFVKDYIFPCLRAGAI 177
>gi|239625091|ref|ZP_04668122.1| asparagine synthase [Clostridiales bacterium 1_7_47_FAA]
gi|239519321|gb|EEQ59187.1| asparagine synthase [Clostridiales bacterium 1_7_47FAA]
Length = 273
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 67/180 (37%), Gaps = 42/180 (23%)
Query: 15 FSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
FSGG DSS L A D +V ++FD +LE V ++
Sbjct: 25 FSGGVDSSLLLKVAADAAVETGKKVYAVTFDSRLHPSCDLEIARRVAGELG--------- 75
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
G ++ + L +I+ N + ++ R +F+ LA G++
Sbjct: 76 -GIHQVIEVDELEQ-----------EEIRMNPVNRCYLCKR-HLFMSL-KKLAGEYGVSR 121
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLKKYETWKLAQDIG 188
I+ G E D Y R I+A+ + + +PL + + K ++A + G
Sbjct: 122 ILDGTNEDDMHVY---RPG-IQAL---------KELGIISPLAELHITKDAVKQMAAEYG 168
>gi|224373210|ref|YP_002607582.1| thiamine biosynthesis protein:ExsB [Nautilia profundicola AmH]
gi|223588685|gb|ACM92421.1| thiamine biosynthesis protein:ExsB [Nautilia profundicola AmH]
Length = 319
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
A+ LFSGG DS+ + ++ +E + D G
Sbjct: 2 KAIALFSGGLDSALAIKLIQEQNIEIEGVYIDVG 35
>gi|167770719|ref|ZP_02442772.1| hypothetical protein ANACOL_02065 [Anaerotruncus colihominis DSM
17241]
gi|167667314|gb|EDS11444.1| hypothetical protein ANACOL_02065 [Anaerotruncus colihominis DSM
17241]
Length = 248
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
++D + P + FSGG DS+ L A V
Sbjct: 3 LSDFFAEHPRVAVAFSGGVDSAYLLYAAKTAGCDVHA 39
>gi|126665050|ref|ZP_01736033.1| argininosuccinate synthase [Marinobacter sp. ELB17]
gi|126630420|gb|EBA01035.1| argininosuccinate synthase [Marinobacter sp. ELB17]
Length = 403
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
+ +L +SGG D+S + W D + V T + D GQ +VE + E+
Sbjct: 1 MSDINKVVLAYSGGLDTSVIVRWLQDTYGCEVVTFTADIGQGEEVEPARVKAKALGVKEI 60
Query: 64 -MPKWKDSLGEDHILPL 79
+ ++ D++ P+
Sbjct: 61 YIEDLREEFVRDYVFPM 77
>gi|322701177|gb|EFY92928.1| asparagine synthetase [Metarhizium acridum CQMa 102]
Length = 590
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 13 LLFSGGQDSSTCLSWALDR 31
+L SGG DSS + A
Sbjct: 244 VLLSGGLDSSLVAAIAQRE 262
>gi|310793516|gb|EFQ28977.1| asparagine synthase [Glomerella graminicola M1.001]
Length = 580
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 13 LLFSGGQDSSTCLSWALDR 31
+L SGG DSS + A
Sbjct: 233 VLLSGGLDSSLVAAIAQRE 251
>gi|294506486|ref|YP_003570544.1| Sulfate adenylyltransferase subunit 2 [Salinibacter ruber M8]
gi|294342814|emb|CBH23592.1| Sulfate adenylyltransferase subunit 2 [Salinibacter ruber M8]
Length = 303
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD 33
M + + + + +L+FSGG+DS T + A F
Sbjct: 22 MRETVAQFDNPVLMFSGGKDSLTMIHLARKAFY 54
>gi|291548285|emb|CBL21393.1| NAD+ synthetase [Ruminococcus sp. SR1/5]
Length = 649
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDR 34
+ SA++ SGG DS+ L FDR
Sbjct: 355 SRSAVVGLSGGLDSTLALLVMARAFDR 381
>gi|83815072|ref|YP_444723.1| sulfate adenylyltransferase subunit 2 [Salinibacter ruber DSM
13855]
gi|83756466|gb|ABC44579.1| sulfate adenylate transferase, subunit 2 [Salinibacter ruber DSM
13855]
Length = 301
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD 33
M + + + + +L+FSGG+DS T + A F
Sbjct: 20 MRETVAQFDNPVLMFSGGKDSLTMIHLARKAFY 52
>gi|290559553|gb|EFD92882.1| hypothetical protein BJBARM5_0389 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 333
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 16 SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
SGG+DSS L + +FD G E V K
Sbjct: 62 SGGKDSSAMLYTLKKMGFKPLAFTFDIGYYPMHEFSRARAVAK 104
>gi|256811233|ref|YP_003128602.1| argininosuccinate synthase [Methanocaldococcus fervens AG86]
gi|256794433|gb|ACV25102.1| argininosuccinate synthase [Methanocaldococcus fervens AG86]
Length = 395
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
A+L +SGG D+S CL D++ +V ++ D GQ
Sbjct: 1 MERIAVLAYSGGLDTSCCLKLLEDKYGYKVVSVCVDVGQ 39
>gi|255282422|ref|ZP_05346977.1| argininosuccinate synthase [Bryantella formatexigens DSM 14469]
gi|255267006|gb|EET60211.1| argininosuccinate synthase [Bryantella formatexigens DSM 14469]
Length = 409
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + F V + GQ N+++ LE R + +
Sbjct: 1 MKEKVILAYSGGLDTTALIPWLKETFDYEVICCCINCGQGNELDGLEERAKLSGASKLYI 60
Query: 65 PKWKDSLGEDHILP 78
D +D I+P
Sbjct: 61 EDIIDEFCDDFIMP 74
>gi|189485208|ref|YP_001956149.1| tRNA(Ile)-lysidine synthase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287167|dbj|BAG13688.1| tRNA(Ile)-lysidine synthase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 321
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 23/142 (16%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLS--WALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
N + +L SGG DS L W L + + L+ ++ + E K
Sbjct: 14 NGFVIPGDKIILSVSGGMDSMCMLHLFWRLAKKMDIVFLAVNFNHNLRKE-------SVK 66
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
E + G D +L +I +K ++ ++ GRN+ +L
Sbjct: 67 EAETVKNLSAEFGIDCLLE-----EIGVKEYSKKYSLSVETA--------GRNLRYLTL- 112
Query: 120 ATLAYRLGITNIVIGVCETDYS 141
++ + I D +
Sbjct: 113 ERISKKYKCNKIATAHNANDNA 134
>gi|153215154|ref|ZP_01949852.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 1587]
gi|124114878|gb|EAY33698.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 1587]
gi|327485421|gb|AEA79827.1| NAD synthetase [Vibrio cholerae LMA3894-4]
Length = 276
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 62/206 (30%), Gaps = 36/206 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 31 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGEQKDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + + + N+
Sbjct: 91 AQLALSFIRPTHSVSVNIKAGVDGLHAASHQALANTGL-IPSDPAKIDFIKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNL 195
PL L K + LA+ +G + +
Sbjct: 188 APLFGLNKRQVRLLAKTLGAPEQLVY 213
>gi|148653679|ref|YP_001280772.1| NAD+ synthetase [Psychrobacter sp. PRwf-1]
gi|148572763|gb|ABQ94822.1| NAD+ synthetase [Psychrobacter sp. PRwf-1]
Length = 552
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
++ SGG DS+ L A+D D+V + Y +++ LE +++
Sbjct: 292 EGVIVGLSGGIDSALTLCVAVDALGSDKVYAVMMPYEYTSQISLEDAQAQARRL 345
>gi|71003584|ref|XP_756458.1| hypothetical protein UM00311.1 [Ustilago maydis 521]
gi|46096063|gb|EAK81296.1| hypothetical protein UM00311.1 [Ustilago maydis 521]
Length = 634
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
+L SGG DSS S A D++ L QR + E R
Sbjct: 248 VLLSGGLDSSLIASIAARETDKMADL-----QRKQWEERQARRSR 287
>gi|302387619|ref|YP_003823441.1| argininosuccinate synthase [Clostridium saccharolyticum WM1]
gi|302198247|gb|ADL05818.1| argininosuccinate synthase [Clostridium saccharolyticum WM1]
Length = 408
Score = 35.6 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + F V D GQ N+++ LE R + +
Sbjct: 1 MKEKVILAYSGGLDTTAIIPWLKEHFDYEVVCCCIDCGQGNELDGLEERAKLSGASKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +++I+P + + + +M
Sbjct: 61 EDLVDDFCDNYIVPCVLANAVYENKYLLGTSMA 93
>gi|103487012|ref|YP_616573.1| sulfate adenylyltransferase subunit 2 [Sphingopyxis alaskensis
RB2256]
gi|98977089|gb|ABF53240.1| sulfate adenylyltransferase subunit 2 [Sphingopyxis alaskensis
RB2256]
Length = 301
Score = 35.6 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD 33
M +++ A ++L+S G+DS+ L A F
Sbjct: 19 MREVMADAAKPVMLYSVGKDSAVMLHLARKAFY 51
>gi|326328184|gb|ADZ54159.1| sulfate adenylytranseferase small subunit [uncultured bacterium]
Length = 319
Score = 35.6 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF 32
M ++ + +LLFSGG+DS+ L A F
Sbjct: 38 MREVAAECERPVLLFSGGKDSAVLLRLAEKAF 69
>gi|294934126|ref|XP_002780992.1| hypothetical protein Pmar_PMAR018043 [Perkinsus marinus ATCC 50983]
gi|239891163|gb|EER12787.1| hypothetical protein Pmar_PMAR018043 [Perkinsus marinus ATCC 50983]
Length = 733
Score = 35.6 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 18/147 (12%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKV--ELECR 53
+N P L+L SGG DS T L ++ + R+ EL+
Sbjct: 246 LNYPNNTVPKVLVLSLSGGVDSMTHLYLLSKLQQPLGFKLVACHIRHSNRDDAIQELQWV 305
Query: 54 LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
V ++ + L H + + + T+++ + +
Sbjct: 306 TYVTARLGVPLYHHHVKLRRPHGSLKTGISRMDYEKQTRDIRFSMYAKAHKLAW------ 359
Query: 114 IFLVFAATLAYRLGIT-NIVIGVCETD 139
AA L +V+G D
Sbjct: 360 ----AAAGLPEEERTQPVVVVGHHMDD 382
>gi|167754850|ref|ZP_02426977.1| hypothetical protein CLORAM_00354 [Clostridium ramosum DSM 1402]
gi|167704900|gb|EDS19479.1| hypothetical protein CLORAM_00354 [Clostridium ramosum DSM 1402]
Length = 599
Score = 35.6 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE 51
D++K +L SGG DS L ++ +Y R +L+
Sbjct: 6 DLLKMQELYILGVSGGCDSMALLDMMNQAGYQIIVCHVNYHLREDSDLD 54
>gi|291547033|emb|CBL20141.1| argininosuccinate synthase [Ruminococcus sp. SR1/5]
Length = 410
Score = 35.6 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + F V + GQ N+++ LE R + +
Sbjct: 1 MKEKVVLAYSGGLDTTALIPWLKETFDYDVVCCCVNCGQGNELDGLEERAKMSGASKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +D I+P G + S +M
Sbjct: 61 EDIVDEFCDDFIMPCVEAGAVYEHSYLLGTSMA 93
>gi|297527272|ref|YP_003669296.1| ATP binding protein [Staphylothermus hellenicus DSM 12710]
gi|297256188|gb|ADI32397.1| ATP binding protein [Staphylothermus hellenicus DSM 12710]
Length = 224
Score = 35.6 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY 42
A +LF+GG+DS+ L A + + LS Y
Sbjct: 2 KATILFTGGKDSTYALHLAYLQGFDIVVLSTIY 34
>gi|255086163|ref|XP_002509048.1| predicted protein [Micromonas sp. RCC299]
gi|226524326|gb|ACO70306.1| predicted protein [Micromonas sp. RCC299]
Length = 478
Score = 35.6 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
+ +L SGG DSS L+
Sbjct: 14 RKLKVAVLLSGGVDSSVALTLLKAAGHDCVAF 45
>gi|126466061|ref|YP_001041170.1| ATP binding protein [Staphylothermus marinus F1]
gi|126014884|gb|ABN70262.1| putative ATP binding protein [Staphylothermus marinus F1]
Length = 224
Score = 35.6 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY 42
A +LF+GG+DS+ L A + + LS Y
Sbjct: 2 KATILFTGGKDSTYALHLAYLQGFDIVVLSTIY 34
>gi|124486111|ref|YP_001030727.1| argininosuccinate synthase [Methanocorpusculum labreanum Z]
gi|124363652|gb|ABN07460.1| argininosuccinate synthase [Methanocorpusculum labreanum Z]
Length = 402
Score = 35.6 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 1 MNDIIKKA-PSALLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCV 56
M D +K ++L FSGG D+S C+ + +DRV T++ D GQ + E++
Sbjct: 1 MTDTNEKTGKGTVVLAFSGGLDTSICVPILKNMYGYDRVVTVAADVGQ-PESEVKMATDK 59
Query: 57 RKKIVE--LMPKWKDSLGEDHILP 78
I + KD+ ++H+ P
Sbjct: 60 GNLIADKHYTLDLKDAFVKNHVFP 83
>gi|238920862|ref|YP_002934377.1| Phosphoadenosine phosphosulfate reductase family protein
[Edwardsiella ictaluri 93-146]
gi|238870431|gb|ACR70142.1| Phosphoadenosine phosphosulfate reductase family protein
[Edwardsiella ictaluri 93-146]
Length = 403
Score = 35.6 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALD 30
MN + P + FSGG+DS+ L A +
Sbjct: 18 MNWVFDTFPRVCVSFSGGKDSTVLLHIAAE 47
>gi|324997995|ref|ZP_08119107.1| asparagine synthase [Pseudonocardia sp. P1]
Length = 648
Score = 35.6 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 18/46 (39%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+ + A + + T + + + E++ I
Sbjct: 278 LSGGIDSTAIAALAKEHNPNLITFTTGFEREGYSEVDVAAESAAAI 323
>gi|254286697|ref|ZP_04961652.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae AM-19226]
gi|150423281|gb|EDN15227.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae AM-19226]
Length = 276
Score = 35.6 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 62/204 (30%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 31 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGEQKDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + + + N+
Sbjct: 91 AQLALSFIRPTHSVSVNIKAGVDGLHAASHHALANTGL-IPSDPAKIDFIKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + LA+ +G + +
Sbjct: 188 APLFGLNKRQVRLLAKTLGAPEQL 211
>gi|86157907|ref|YP_464692.1| tRNA-specific 2-thiouridylase MnmA [Anaeromyxobacter dehalogenans
2CP-C]
gi|123497474|sp|Q2IHX6|MNMA_ANADE RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|85774418|gb|ABC81255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 351
Score = 35.6 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 11/80 (13%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVE--------LECRLCVRK 58
L+ SGG DSST + V ++ DY + + R R+
Sbjct: 2 RILVAMSGGVDSSTAAALLAGEGHEVIGVTMRVADYSDAARGRSCCAPDDVEDARAAARR 61
Query: 59 KIVELMPKWKDSLGEDHILP 78
+ ++ + ++
Sbjct: 62 LGIPFYVANVEARFRERVID 81
>gi|294934128|ref|XP_002780993.1| hypothetical protein Pmar_PMAR018043 [Perkinsus marinus ATCC 50983]
gi|239891164|gb|EER12788.1| hypothetical protein Pmar_PMAR018043 [Perkinsus marinus ATCC 50983]
Length = 527
Score = 35.6 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 18/147 (12%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKV--ELECR 53
+N P L+L SGG DS T L ++ + R+ EL+
Sbjct: 55 LNYPNNTVPKVLVLSLSGGVDSMTHLYLLSKLQQPLGFKLVACHIRHSNRDDAIQELQWV 114
Query: 54 LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
V ++ + L H + + + T+++ + +
Sbjct: 115 TYVTARLGVPLYHHHVKLRRPHGSLKTGISRMDYEKQTRDIRFSMYAKAHKLAW------ 168
Query: 114 IFLVFAATLAYRLGIT-NIVIGVCETD 139
AA L +V+G D
Sbjct: 169 ----AAAGLPEEERTQPVVVVGHHMDD 191
>gi|212528520|ref|XP_002144417.1| asparagine synthetase Asn2, putative [Penicillium marneffei ATCC
18224]
gi|210073815|gb|EEA27902.1| asparagine synthetase Asn2, putative [Penicillium marneffei ATCC
18224]
Length = 575
Score = 35.6 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 13 LLFSGGQDSSTCLSWALDR 31
+L SGG DSS + A
Sbjct: 233 VLLSGGLDSSLVAAIAQRE 251
>gi|319951012|ref|ZP_08024879.1| asparagine synthase [Dietzia cinnamea P4]
gi|319435321|gb|EFV90574.1| asparagine synthase [Dietzia cinnamea P4]
Length = 641
Score = 35.6 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 18/46 (39%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DS+ + A + + T + + + E++ I
Sbjct: 273 LSGGIDSTAIAALARRHNENLLTFTTGFEREGYSEIDVAAESAAAI 318
>gi|315222833|ref|ZP_07864718.1| tRNA(Ile)-lysidine synthetase [Streptococcus anginosus F0211]
gi|315188069|gb|EFU21799.1| tRNA(Ile)-lysidine synthetase [Streptococcus anginosus F0211]
Length = 425
Score = 35.6 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKV--ELECRLCVRKK 59
+ LL SGG DS T L W + + ++G R + E E + KK
Sbjct: 17 RHHRKVLLAISGGLDSMTLLDWLYKYREKLEIEIFLAHINHGVRKESDFEEEELKKIAKK 76
Query: 60 I 60
+
Sbjct: 77 L 77
>gi|284163626|ref|YP_003401905.1| argininosuccinate synthase [Haloterrigena turkmenica DSM 5511]
gi|284013281|gb|ADB59232.1| argininosuccinate synthase [Haloterrigena turkmenica DSM 5511]
Length = 429
Score = 35.6 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 15 FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCV 56
FSGG D++ C+ + +D V ++ D GQ E
Sbjct: 8 FSGGLDTTVCVPLLEEEYGYDDVIGVTVDVGQPASEFEEAEETA 51
>gi|289193162|ref|YP_003459103.1| argininosuccinate synthase [Methanocaldococcus sp. FS406-22]
gi|288939612|gb|ADC70367.1| argininosuccinate synthase [Methanocaldococcus sp. FS406-22]
Length = 395
Score = 35.6 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
A+L +SGG D+S CL D++ +V ++ D GQ
Sbjct: 1 MERIAVLAYSGGLDTSCCLKLLEDKYGYKVVSVCVDVGQ 39
>gi|307266583|ref|ZP_07548114.1| tRNA methyl transferase-like protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|326391761|ref|ZP_08213282.1| tRNA methyl transferase-like protein [Thermoanaerobacter
ethanolicus JW 200]
gi|306918380|gb|EFN48623.1| tRNA methyl transferase-like protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|325992199|gb|EGD50670.1| tRNA methyl transferase-like protein [Thermoanaerobacter
ethanolicus JW 200]
Length = 297
Score = 35.6 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ ++ SGG+DS V D G +E +++VE
Sbjct: 42 KMLPPKGRVVVAISGGKDSLVTTFVLKRLGYEVLGFFIDLG----IEENNFSSRSREVVE 97
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
K D E L I + ++
Sbjct: 98 NFCKENDIPLEIVSLKEKFRKGIPDVAKHQD 128
>gi|291166567|gb|EFE28613.1| tRNA(Ile)-lysidine synthase [Filifactor alocis ATCC 35896]
Length = 466
Score = 35.6 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFD 41
N++I+ ++ FSGG DS L + + +
Sbjct: 14 NNLIQPKEKVIVAFSGGPDSVCLLHLLHELKAELDIKLYAFHLN 57
>gi|23006868|ref|ZP_00048990.1| COG0137: Argininosuccinate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 142
Score = 35.6 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 1 MND--IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
M+D K +L +SGG D+S L W + V T + D GQ ELE
Sbjct: 1 MSDASPTKPVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQ--GEELEPARKKA 58
Query: 58 KKI 60
+ +
Sbjct: 59 ELL 61
>gi|300780801|ref|ZP_07090655.1| asparagine synthase [Corynebacterium genitalium ATCC 33030]
gi|300532508|gb|EFK53569.1| asparagine synthase [Corynebacterium genitalium ATCC 33030]
Length = 640
Score = 35.6 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 11/74 (14%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
SGG DS+ + A + T + + ++ E++ + I G +
Sbjct: 272 LSGGIDSTAIATLAKRHNPNLLTFTTGFERQGYSEVDVAAESAEAI-----------GVE 320
Query: 75 HILPLAILGDISHS 88
HI+ + + + S
Sbjct: 321 HIVKIVSPEEYAES 334
>gi|91773296|ref|YP_565988.1| thiamine biosynthesis protein [Methanococcoides burtonii DSM 6242]
gi|91712311|gb|ABE52238.1| RNA binding protein containing THUMP domain [Methanococcoides
burtonii DSM 6242]
Length = 309
Score = 35.6 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
++L SGG DS + R +V + Y + L K VE + KW
Sbjct: 183 IVLMSGGIDSPVAAWLMMKRGVKVIPV---YANNIPFSDDRALERAIKAVERLQKWS 236
>gi|312898239|ref|ZP_07757630.1| tRNA(Ile)-lysidine synthetase [Megasphaera micronuciformis F0359]
gi|310620736|gb|EFQ04305.1| tRNA(Ile)-lysidine synthetase [Megasphaera micronuciformis F0359]
Length = 461
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 44/143 (30%), Gaps = 31/143 (21%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRK 58
+++ + + ++ SGG DS L DR + ++G R E +
Sbjct: 17 NLLDRQDTVIVAVSGGPDSIALLHILAALQDRWSLHLVAAYVNHGLRAAAFEEEVFVESQ 76
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN--IIFL 116
+ + I + + ++++ GRN F
Sbjct: 77 ARAVGAEFYCRRIDAAAI------------AEKQGLSIETA----------GRNERYAFF 114
Query: 117 VFAATLAYRLGITNIVIGVCETD 139
LA + G I +G E D
Sbjct: 115 S---ELAEKTGAVRIAVGHHEDD 134
>gi|228939402|ref|ZP_04101991.1| Asparagine synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228976104|ref|ZP_04136612.1| Asparagine synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228783624|gb|EEM31695.1| Asparagine synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820246|gb|EEM66282.1| Asparagine synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 380
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DSS S A + + T S + R E++ +K+
Sbjct: 11 LSGGIDSSIIASIAKEINPNLLTFSVGFEHRGFSEIDVAKETAEKL 56
>gi|229179383|ref|ZP_04306737.1| Asparagine synthetase [Bacillus cereus 172560W]
gi|228604281|gb|EEK61748.1| Asparagine synthetase [Bacillus cereus 172560W]
Length = 632
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DSS S A + + T S + R E++ +K+
Sbjct: 263 LSGGIDSSIIASIAKEINPNLLTFSVGFEHRGFSEIDVAKETAEKL 308
>gi|262202954|ref|YP_003274162.1| asparagine synthase (glutamine-hydrolyzing) [Gordonia bronchialis
DSM 43247]
gi|262086301|gb|ACY22269.1| asparagine synthase (glutamine-hydrolyzing) [Gordonia bronchialis
DSM 43247]
Length = 646
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 20/48 (41%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ + T + + + E++ + + I
Sbjct: 278 LSGGIDSTAIAALAIRHNPDLITFTTGFERDGYSEIDVAVESAEAIGA 325
>gi|124516707|gb|EAY58215.1| Argininosuccinate synthase [Leptospirillum rubarum]
Length = 408
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 1 MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
M P ++L +SGG D+S ++W +++ +V D GQ +E R R
Sbjct: 1 MVQETGAGPGKVVLAYSGGLDTSVIMTWLKEKYGCQVVAYCADLGQGEDLEEISRKAFR 59
>gi|47568304|ref|ZP_00239006.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus cereus G9241]
gi|47554997|gb|EAL13346.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus cereus G9241]
Length = 632
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DSS S A + + T S + R E++ +K+
Sbjct: 263 LSGGIDSSIIASIAKEINPNLLTFSVGFEHRGFSEIDVAKETAEKL 308
>gi|300870722|ref|YP_003785593.1| putative cell cycle protein MesJ [Brachyspira pilosicoli 95/1000]
gi|300688421|gb|ADK31092.1| putative Cell cycle protein, MesJ [Brachyspira pilosicoli 95/1000]
Length = 455
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKV----ELECR 53
++ KK A+ SGG DS L+ A + + +Y R + E+ R
Sbjct: 29 SNKEKKITFAVAY-SGGIDSQVLLNIAYKLKDKLNYNLIAIHVNYNLRGEESIGDEMFAR 87
Query: 54 LCVRKKIVELMPKWKDS 70
+ +++ K +
Sbjct: 88 ETAKNYNIDIYVKHIEK 104
>gi|294674844|ref|YP_003575460.1| argininosuccinate synthase [Prevotella ruminicola 23]
gi|294471726|gb|ADE81115.1| argininosuccinate synthase [Prevotella ruminicola 23]
Length = 400
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 37/133 (27%), Gaps = 23/133 (17%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVRKKIVE 62
++ FSGG D+S + V + G Q K E K V
Sbjct: 3 NKKVVVAFSGGLDTSYTVMKLTQDGWDVYAACANTGGFSDEQLKKNEENAFKLGAKAYVT 62
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT- 121
L E + + + ++ +V+ + IF A
Sbjct: 63 L--DVTHEYYEKSLKYMIFGNVLRNNCYPISVSSER---------------IFQAIAIAR 105
Query: 122 LAYRLGITNIVIG 134
A +G I G
Sbjct: 106 YAKEIGADAIAHG 118
>gi|319902670|ref|YP_004162398.1| NH(3)-dependent NAD(+) synthetase [Bacteroides helcogenes P 36-108]
gi|319417701|gb|ADV44812.1| NH(3)-dependent NAD(+) synthetase [Bacteroides helcogenes P 36-108]
Length = 641
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRV 35
+ KA SA++ SGG DS+ L FD++
Sbjct: 344 VHTKAKSAVVGISGGLDSTLALLVCARTFDKL 375
>gi|298715854|emb|CBJ28319.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1083
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 13 LLFSGGQDSSTCLSWALDRFDR 34
+LFSGG DS + +
Sbjct: 476 ILFSGGLDSVVLAALLAEEGAE 497
>gi|262281632|ref|ZP_06059401.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. 2_1_36FAA]
gi|262262086|gb|EEY80783.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. 2_1_36FAA]
Length = 425
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 9 PSALLLFSGGQDSST---CLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
LL SGG DS T L D + ++ QR +E + K+I + +
Sbjct: 20 QRVLLAISGGLDSMTLLNLLYKYQKELDIELILAHINHKQR--IEADQEEKQLKEIAQKL 77
Query: 65 P 65
Sbjct: 78 G 78
>gi|258404447|ref|YP_003197189.1| hypothetical protein Dret_0309 [Desulfohalobium retbaense DSM
5692]
gi|257796674|gb|ACV67611.1| conserved hypothetical protein [Desulfohalobium retbaense DSM
5692]
Length = 349
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSF 40
L LFSGG DS + RV + F
Sbjct: 9 LTLFSGGLDSILATKVLQAQGLRVLGVHF 37
>gi|157150417|ref|YP_001451360.1| tRNA(Ile)-lysidine synthetase [Streptococcus gordonii str.
Challis substr. CH1]
gi|189035973|sp|A8B000|TILS_STRGC RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|157075211|gb|ABV09894.1| tRNA(Ile)-lysidine synthetase [Streptococcus gordonii str.
Challis substr. CH1]
Length = 425
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 9 PSALLLFSGGQDSST---CLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
LL SGG DS T L D + ++ QR +E + K+I + +
Sbjct: 20 QRVLLAISGGLDSMTLLNLLYKYQKELDIELILAHINHKQR--IEADQEEKQLKEIAQKL 77
Query: 65 P 65
Sbjct: 78 G 78
>gi|327310318|ref|YP_004337215.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Thermoproteus uzoniensis 768-20]
gi|326946797|gb|AEA11903.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Thermoproteus uzoniensis 768-20]
Length = 519
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 9 PSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
L+ SGG DS+ A +R + ++G + E E L K++
Sbjct: 225 EKVLVAVSGGVDSTVTAVLTARAVGERAVPIFVNHGLFREGEPEEVLSALKRL 277
>gi|256425508|ref|YP_003126161.1| argininosuccinate synthase [Chitinophaga pinensis DSM 2588]
gi|256040416|gb|ACU63960.1| argininosuccinate synthase [Chitinophaga pinensis DSM 2588]
Length = 399
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 20/131 (15%)
Query: 9 PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
+L FSGG D S D+ V ++ + G + EL+ +
Sbjct: 2 KKVVLGFSGGLDTSYCVKYLTDDKGYEVHSVIVNTGGFSAEELQEIERRAYSL------- 54
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAY-- 124
+ + + S++ V + ++N P + R + A +A
Sbjct: 55 --GVKSHKTVD--AIRSYYDSAIKYLVFGNVLKNNTYPLSVSAER----VTQALAIAEHV 106
Query: 125 -RLGITNIVIG 134
+G + G
Sbjct: 107 KAVGADAVAHG 117
>gi|153801620|ref|ZP_01956206.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae MZO-3]
gi|124122876|gb|EAY41619.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae MZO-3]
Length = 276
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 62/204 (30%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 31 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHHTTEYQFIAVRLPYGEQKDEDE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + + + N+
Sbjct: 91 AQLALSFIRPTHSVSVNIKAGVDGLHAASHHALANTGL-IPSDPAKIDFIKGNVK----- 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + LA+ +G + +
Sbjct: 188 APLFGLNKRQVRLLAKTLGAPEQL 211
>gi|297161112|gb|ADI10824.1| NH(3)-dependent NAD(+) synthetase [Streptomyces bingchenggensis
BCW-1]
Length = 585
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR--FDRVETLSF--DYGQRNK----VELECRLCVRKKI 60
S L+ SGG DS+ + A D V ++ Y + EL R + +
Sbjct: 327 RSVLIGLSGGIDSALVAAIACDAVGAQNVYGVAMPSRYSSEHSIADAAELARRTGLNFRT 386
Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL 103
V + P + + H+ LA S T +A+ Q+ ++
Sbjct: 387 VPIAPMFDAYMESLHLTGLAEENLQSRLRGTMLMAISNQEGHI 429
>gi|288559819|ref|YP_003423305.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
gi|288542529|gb|ADC46413.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
Length = 305
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 30/146 (20%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV- 61
+ I + L+ SGG+DS L Y +R+ ++L C + + + I
Sbjct: 44 NFIDRGDKVLVALSGGKDSVVTLDILNS-----------YRERHIIDL-CAVTIDEGIAG 91
Query: 62 ------ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF--VPGRNI 113
E+ + LG H + + L + +A + + T+ V R
Sbjct: 92 YREDGVEIAKAHAERLGIPHKVV--SFKESFGIDLDEIMAKENHRGSC--TYCGV-FRRW 146
Query: 114 IFLVFAATLAYRLGITNIVIGVCETD 139
I + A A G T I G D
Sbjct: 147 I-INRA---ARDFGATKIATGHNLDD 168
>gi|283783975|ref|YP_003363840.1| tRNA(Ile)-lysidine synthase [Citrobacter rodentium ICC168]
gi|282947429|emb|CBG86975.1| tRNA(Ile)-lysidine synthase [Citrobacter rodentium ICC168]
Length = 432
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYG 43
+N + P L+ FSGG DS+ L AL R+ + +G
Sbjct: 6 LNTSLFNRPQILVAFSGGLDSTVLLHQLVQWRALRPELRLRAIHIHHG 53
>gi|256752672|ref|ZP_05493523.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748434|gb|EEU61487.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 298
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ ++ SGG+DS V D G +E +++VE
Sbjct: 42 KMLPPKGRVVVAISGGKDSLVTTFVLKRLGYEVLGFFIDLG----IEENNFSSQSREVVE 97
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
K D E L I + ++
Sbjct: 98 SFCKENDIPLEIVNLKEKFGKGIPDVAKRQD 128
>gi|255348647|ref|ZP_05380654.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis 70]
gi|255503187|ref|ZP_05381577.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis 70s]
Length = 358
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETL 38
+ ++ SGG DSS + V L
Sbjct: 1 MRKTIIVAMSGGVDSSVVAYLLKKQGEYNVVGL 33
>gi|242278578|ref|YP_002990707.1| PP-loop domain protein [Desulfovibrio salexigens DSM 2638]
gi|242121472|gb|ACS79168.1| PP-loop domain protein [Desulfovibrio salexigens DSM 2638]
Length = 310
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++++ L+ SGG+DS + + V L D G
Sbjct: 42 NLLEPDDKVLVALSGGKDSLGLMYALSELGYDVTGLHIDLG 82
>gi|152975439|ref|YP_001374956.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024191|gb|ABS21961.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus cytotoxicus
NVH 391-98]
Length = 633
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
SGG DSS S A + + T S + +R E++ +K+
Sbjct: 263 LSGGIDSSIIASIAKEMNPNLLTFSVGFERRGFSEVDVARETAEKL 308
>gi|167038552|ref|YP_001666130.1| PP-loop domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116948|ref|YP_004187107.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166857386|gb|ABY95794.1| PP-loop domain protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319930039|gb|ADV80724.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 298
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++ ++ SGG+DS V D G +E +++VE
Sbjct: 42 KMLPPKGRVVVAISGGKDSLVTTFVLKRLGYEVLGFFIDLG----IEENNFSSQSREVVE 97
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
K D E L I + ++
Sbjct: 98 SFCKENDIPLEIVNLKEKFGKGIPDVAKRQD 128
>gi|93004847|ref|YP_579284.1| bifunctional GMP synthase/glutamine amidotransferase protein
[Psychrobacter cryohalolentis K5]
gi|92392525|gb|ABE73800.1| GMP synthase (glutamine-hydrolyzing) [Psychrobacter cryohalolentis
K5]
Length = 531
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 29/195 (14%)
Query: 9 PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
LL SGG DSS + D++ + D G L + ++M +
Sbjct: 228 KQVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDTG----------LLRLHEGDQVMQIF 277
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
+++G ++ + ++ ++L + + + TF+ +F A ++ +
Sbjct: 278 AENMGV-KVIRVDA-EELFLTALAGESDPEAKRKIIGKTFID----VFANSAREVSEQSD 331
Query: 128 ITNIVIGVCETDYSGYPD---------CRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
I T YPD + I++ L + + PL L K
Sbjct: 332 GKVIEFLAQGT---IYPDVIESAKSHQGKAHVIKSHHNVGGLPDDLAFELVEPLRDLFKD 388
Query: 179 ETWKLAQDIGGQDLV 193
E KL +G +
Sbjct: 389 EVRKLGITLGLPAKM 403
>gi|258620098|ref|ZP_05715137.1| NH(3)-dependent NAD(+) synthetase [Vibrio mimicus VM573]
gi|258624902|ref|ZP_05719830.1| NH(3)-dependent NAD(+) synthetase [Vibrio mimicus VM603]
gi|258582900|gb|EEW07721.1| NH(3)-dependent NAD(+) synthetase [Vibrio mimicus VM603]
gi|258587456|gb|EEW12166.1| NH(3)-dependent NAD(+) synthetase [Vibrio mimicus VM573]
Length = 276
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 61/204 (29%), Gaps = 36/204 (17%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTC---LSWALDRF--------DRVETLSFDYG-QRNKVE 49
+ + +L+L SGG DS+TC A++ + + YG Q+++ E
Sbjct: 31 KLTEARCKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTSEYQFIAVRLPYGEQKDEAE 90
Query: 50 LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
+ L + + K + H L + T V + V
Sbjct: 91 AQLALSFIRPSHSVSVNIKAGVDGLHAASQQAL------ANTDLVPNDPAKIDFIKGNVK 144
Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
R A +A + V TD+S +
Sbjct: 145 AR-------ARMVAQYEIAGYVGGLVLGTDHSA--ENITGFYTKF--------GDGACDL 187
Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
PL L K + LA+ +G +
Sbjct: 188 APLYGLNKRQVRLLAETLGAPAQL 211
>gi|303284375|ref|XP_003061478.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456808|gb|EEH54108.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 384
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+L SGG DSS L+ V
Sbjct: 5 VLLSGGVDSSVALTLLQAAGHDVTAF 30
>gi|170088274|ref|XP_001875360.1| asparagine synthase [Laccaria bicolor S238N-H82]
gi|164650560|gb|EDR14801.1| asparagine synthase [Laccaria bicolor S238N-H82]
Length = 586
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRV 35
+L SGG DSS + A ++V
Sbjct: 241 VLLSGGLDSSLIAAIAARETEKV 263
>gi|149372618|ref|ZP_01891730.1| sulfate adenylyltransferase subunit 2 [unidentified eubacterium
SCB49]
gi|149354661|gb|EDM43225.1| sulfate adenylyltransferase subunit 2 [unidentified eubacterium
SCB49]
Length = 301
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD 33
+ ++LFSGG+DS A F
Sbjct: 28 ENPVILFSGGKDSILVAHLAKKAFY 52
>gi|149372628|ref|ZP_01891740.1| sulfate adenylyltransferase, subunit 2 [unidentified eubacterium
SCB49]
gi|149354671|gb|EDM43235.1| sulfate adenylyltransferase, subunit 2 [unidentified eubacterium
SCB49]
Length = 301
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFD 33
+ ++LFSGG+DS A F
Sbjct: 28 ENPVILFSGGKDSILVAHLAKKAFY 52
>gi|328880246|emb|CCA53485.1| Asparagine synthetase [Streptomyces venezuelae ATCC 10712]
Length = 591
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 43/128 (33%), Gaps = 20/128 (15%)
Query: 8 APSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
A A +L SGG DSS + A V T S +G EL V
Sbjct: 245 AEPAAVLLSGGIDSSLVTALAAKLHSHPVHTWSISFGDDLPNELGYSGLVAAHCH----- 299
Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
+L ++ G+ + L + A+ P T VP + L A
Sbjct: 300 -----TRHRVLTVS--GEAVAARLAEAAALLDSPVGDPLT-VPN---LMLAEAVA---AD 345
Query: 127 GITNIVIG 134
G T ++ G
Sbjct: 346 GATVVLNG 353
>gi|313677167|ref|YP_004055163.1| asparagine synthase (glutamine-hydrolyzing) [Marivirga tractuosa
DSM 4126]
gi|312943865|gb|ADR23055.1| asparagine synthase (glutamine-hydrolyzing) [Marivirga tractuosa
DSM 4126]
Length = 608
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 10/92 (10%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWKDSLGE 73
SGG DSS A ++ + +Y Q + E + + K
Sbjct: 258 LSGGWDSSVIAYEASKHEQNLQAFTVEYPFQTTQNESKIAKETANQFGLNHQMIK----- 312
Query: 74 DHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
+ + L + S T + + + LPN
Sbjct: 313 ---IDKSPLSILEKSIRTFDQPLA-DSSALPN 340
>gi|23016842|ref|ZP_00056594.1| COG0367: Asparagine synthase (glutamine-hydrolyzing)
[Magnetospirillum magnetotacticum MS-1]
Length = 615
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 20/109 (18%)
Query: 13 LLFSGGQDSSTCLSWALDR-------FDRVET--LSFD-----------YGQRNKVELEC 52
+ SGG DSS L+ A + SFD G R+ VE
Sbjct: 261 IFLSGGIDSSAMLALAARHRPAASLDGFSIGFTEASFDESAFARRMAAEVGCRHHVETCD 320
Query: 53 RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN 101
R+ + +L+ + + G+ ILP ++L + S+T ++ D
Sbjct: 321 LDAARRDLPDLLARLDEPSGDPSILPTSLLCRFARRSVTVALSGDGGDE 369
>gi|297526033|ref|YP_003668057.1| phosphoadenosine phosphosulfate reductase [Staphylothermus
hellenicus DSM 12710]
gi|297254949|gb|ADI31158.1| phosphoadenosine phosphosulfate reductase [Staphylothermus
hellenicus DSM 12710]
Length = 418
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDR 34
+ + K L+ FSGG+DS L A +
Sbjct: 209 NSLGKPDIVLVSFSGGKDSLVVLHMAKMHYGE 240
>gi|118104747|ref|XP_422953.2| PREDICTED: hypothetical protein, partial [Gallus gallus]
Length = 122
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
+ + + +L +SGG D+S L W ++ V GQ
Sbjct: 1 MAEPRDTVVLAYSGGLDTSCILVWLKEQGYTVIAFLAKIGQ 41
>gi|332868347|ref|ZP_08438106.1| NAD+ synthase [Acinetobacter baumannii 6013113]
gi|332733453|gb|EGJ64632.1| NAD+ synthase [Acinetobacter baumannii 6013113]
Length = 541
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P +L SGG DS+ L+ A+D +RV+ + Y +++ +E +++
Sbjct: 281 PGVILGLSGGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTF-- 338
Query: 67 WKDSLGEDHILPLAILGDI---SHSSLTKNVAMKIQD 100
+ E H + + + + +S +Q
Sbjct: 339 ---GIAEIHSIVNSFMQTLYPFFGNSPADATEENLQA 372
>gi|260553998|ref|ZP_05826263.1| glutamine-dependent NAD+ synthetase [Acinetobacter sp. RUH2624]
gi|260404884|gb|EEW98389.1| glutamine-dependent NAD+ synthetase [Acinetobacter sp. RUH2624]
Length = 541
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P +L SGG DS+ L+ A+D +RV+ + Y +++ +E +++
Sbjct: 281 PGVILGLSGGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTF-- 338
Query: 67 WKDSLGEDHILPLAILGDI---SHSSLTKNVAMKIQD 100
+ E H + + + + +S +Q
Sbjct: 339 ---GIAEIHSIVNSFMQTLYPFFGNSPADATEENLQA 372
>gi|206603533|gb|EDZ40013.1| Argininosuccinate synthase [Leptospirillum sp. Group II '5-way
CG']
Length = 408
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
+L +SGG D+S ++W +++ +V D GQ +E R R
Sbjct: 11 KVVLAYSGGLDTSVIMTWLKEKYGCQVVAYCADLGQGEDLEEISRKAFR 59
>gi|195996679|ref|XP_002108208.1| hypothetical protein TRIADDRAFT_20051 [Trichoplax adhaerens]
gi|190588984|gb|EDV29006.1| hypothetical protein TRIADDRAFT_20051 [Trichoplax adhaerens]
Length = 369
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETL 38
+ SGG DS+ + V +
Sbjct: 10 VAMSGGVDSTIAAYLLRKQGHEVVGI 35
>gi|169634065|ref|YP_001707801.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase
[glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii
SDF]
gi|169152857|emb|CAP01886.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase
[glutamine-hydrolyzing]) (NadE) [Acinetobacter
baumannii]
Length = 541
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P +L SGG DS+ L+ A+D +RV+ + Y +++ +E +++
Sbjct: 281 PGVILGLSGGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTF-- 338
Query: 67 WKDSLGEDHILPLAILGDI---SHSSLTKNVAMKIQD 100
+ E H + + + + +S +Q
Sbjct: 339 ---GIAEIHSIVNSFMQTLYPFFGNSPADATEENLQA 372
>gi|169796959|ref|YP_001714752.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase
[glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii
AYE]
gi|184157129|ref|YP_001845468.1| NAD synthase [Acinetobacter baumannii ACICU]
gi|213156635|ref|YP_002318296.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii
AB0057]
gi|215484420|ref|YP_002326653.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter
baumannii AB307-0294]
gi|239501190|ref|ZP_04660500.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter
baumannii AB900]
gi|260555750|ref|ZP_05827970.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii ATCC
19606]
gi|301347384|ref|ZP_07228125.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter
baumannii AB056]
gi|301513386|ref|ZP_07238623.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter
baumannii AB058]
gi|301596831|ref|ZP_07241839.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter
baumannii AB059]
gi|332854834|ref|ZP_08435584.1| NAD+ synthase [Acinetobacter baumannii 6013150]
gi|332876339|ref|ZP_08444111.1| NAD+ synthase [Acinetobacter baumannii 6014059]
gi|169149886|emb|CAM87777.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase
[glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii
AYE]
gi|183208723|gb|ACC56121.1| NAD synthase [Acinetobacter baumannii ACICU]
gi|213055795|gb|ACJ40697.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii
AB0057]
gi|213986356|gb|ACJ56655.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter
baumannii AB307-0294]
gi|260410661|gb|EEX03959.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii ATCC
19606]
gi|322507027|gb|ADX02481.1| NadE [Acinetobacter baumannii 1656-2]
gi|323516895|gb|ADX91276.1| NAD synthase [Acinetobacter baumannii TCDC-AB0715]
gi|332727766|gb|EGJ59171.1| NAD+ synthase [Acinetobacter baumannii 6013150]
gi|332735458|gb|EGJ66513.1| NAD+ synthase [Acinetobacter baumannii 6014059]
Length = 541
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
P +L SGG DS+ L+ A+D +RV+ + Y +++ +E +++
Sbjct: 281 PGVILGLSGGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTF-- 338
Query: 67 WKDSLGEDHILPLAILGDI---SHSSLTKNVAMKIQD 100
+ E H + + + + +S +Q
Sbjct: 339 ---GIAEIHSIVNSFMQTLYPFFGNSPADATEENLQA 372
>gi|91772881|ref|YP_565573.1| argininosuccinate synthase [Methanococcoides burtonii DSM 6242]
gi|119361289|sp|Q12XK3|ASSY_METBU RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|91711896|gb|ABE51823.1| Argininosuccinate synthase [Methanococcoides burtonii DSM 6242]
Length = 394
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE-- 62
+ L +SGG D+S C+ + +D V T++ D GQ K ++ KKI +
Sbjct: 1 MSKKVALAYSGGLDTSICIPLLKEEYGYDEVITVAVDVGQ-PKEDVAQAEEKAKKISDKH 59
Query: 63 LMPKWKDSLGEDHILPL 79
++ D+I PL
Sbjct: 60 FTLDVREEFVNDYIFPL 76
>gi|154490240|ref|ZP_02030501.1| hypothetical protein PARMER_00472 [Parabacteroides merdae ATCC
43184]
gi|154089132|gb|EDN88176.1| hypothetical protein PARMER_00472 [Parabacteroides merdae ATCC
43184]
Length = 444
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
++ + L+ SGG DS L+ ++ ++ R L VR+ +L
Sbjct: 14 LLTENRPVLVGVSGGADSIALLTILVESGYSCIAAHCNFHLRGDESLRDEQFVREYARKL 73
>gi|116515015|ref|YP_802644.1| hypothetical protein BCc_073 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116256869|gb|ABJ90551.1| tRNA(Ile)-lysidine synthetase [Buchnera aphidicola str. Cc
(Cinara cedri)]
Length = 435
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 8 APSALLLFSGGQDSSTC---LSWALDRFDRV--ETLSFDYGQRNKVELECRLCV 56
LL SGG DS+ L +F + T+ ++ + +L + C+
Sbjct: 13 KKKFLLALSGGVDSTVLFYQLIIWKKKFQEINFRTIHINHHLHSHAKLAQKHCI 66
>gi|299533879|ref|ZP_07047246.1| tRNA(Ile)-lysidine synthetase [Comamonas testosteroni S44]
gi|298718163|gb|EFI59153.1| tRNA(Ile)-lysidine synthetase [Comamonas testosteroni S44]
Length = 336
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 13 LLFSGGQD-SSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCVRKKIVEL 63
+ FSGG D S+ L+ RV + +G QR+ +L R + K+ +
Sbjct: 34 VAFSGGADSSALLLACHARWPGRVRAIHVHHGLQAAADEFQRHCEQLCARHGIALKVCAI 93
Query: 64 MPK 66
+
Sbjct: 94 DAR 96
>gi|225575090|ref|ZP_03783700.1| hypothetical protein RUMHYD_03179 [Blautia hydrogenotrophica DSM
10507]
gi|225037649|gb|EEG47895.1| hypothetical protein RUMHYD_03179 [Blautia hydrogenotrophica DSM
10507]
Length = 409
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + F V D GQ +++ LE R + +
Sbjct: 1 MKEKVILAYSGGLDTTAIIPWLKENFDYEVICCCIDCGQGEELDGLEERAKLSGASKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +D+I+P G + + +M
Sbjct: 61 ENIIDEFCDDYIMPCVKAGAVYENKYLLGTSMA 93
>gi|240146382|ref|ZP_04744983.1| argininosuccinate synthase [Roseburia intestinalis L1-82]
gi|257201492|gb|EEU99776.1| argininosuccinate synthase [Roseburia intestinalis L1-82]
gi|291535768|emb|CBL08880.1| argininosuccinate synthase [Roseburia intestinalis M50/1]
gi|291538261|emb|CBL11372.1| argininosuccinate synthase [Roseburia intestinalis XB6B4]
Length = 410
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + + V D GQ +++ LE R +
Sbjct: 1 MKEKVILAYSGGLDTTAIIPWLKENYDYEVICCCIDCGQEEELDGLEERAISCGASKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
D +D+I+P I + +M
Sbjct: 61 VDIIDEFCDDYIMPCVQANAIYENKYLLGTSMA 93
>gi|193212019|ref|YP_001997972.1| tRNA-specific 2-thiouridylase MnmA [Chlorobaculum parvum NCIB
8327]
gi|193085496|gb|ACF10772.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Chlorobaculum parvum NCIB 8327]
Length = 364
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ ++ SGG DS+ + + RV L+
Sbjct: 1 MHAKQHVIIGLSGGVDSAAAACLLIKQGYRVTGLNIR 37
>gi|117928825|ref|YP_873376.1| sulfate adenylyltransferase subunit 2 [Acidothermus
cellulolyticus 11B]
gi|117649288|gb|ABK53390.1| sulfate adenylyltransferase subunit 2 [Acidothermus
cellulolyticus 11B]
Length = 328
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
+LLFSGG+DS+ L AL F
Sbjct: 56 ERPVLLFSGGKDSAVMLHLALKAF 79
>gi|238923969|ref|YP_002937485.1| argininosuccinate synthase [Eubacterium rectale ATCC 33656]
gi|259585358|sp|C4Z9C9|ASSY_EUBR3 RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|238875644|gb|ACR75351.1| argininosuccinate synthase [Eubacterium rectale ATCC 33656]
gi|291524715|emb|CBK90302.1| argininosuccinate synthase [Eubacterium rectale DSM 17629]
gi|291528963|emb|CBK94549.1| argininosuccinate synthase [Eubacterium rectale M104/1]
Length = 408
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRKKIVELM 64
+L +SGG D++ + W + + V + GQ +++ L+ R + +
Sbjct: 1 MKDKVVLAYSGGLDTTAIIPWLKETYDYDVICCCINCGQGEELDGLDERAKLSGASKLYI 60
Query: 65 PKWKDSLGEDHILPLAILGDI 85
D ED+I+P G +
Sbjct: 61 EDICDEFSEDYIVPCVQAGAV 81
>gi|251778156|ref|ZP_04821076.1| argininosuccinate synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082471|gb|EES48361.1| argininosuccinate synthase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 407
Score = 35.2 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQR---NKVELECRLCVRKKI 60
+ K +L +SGG D+S + W + + V + + GQ+ N +E + K+
Sbjct: 1 MNKLNKVILAYSGGLDTSIIIPWLKENYNCEVIAVCGNVGQKDELNGLEEKAIKTGASKL 60
Query: 61 VELMPKWKDSLGEDHILPLAILGDI 85
+ ED+I P G I
Sbjct: 61 --YIEDLTKEFVEDYIFPTIQAGAI 83
>gi|23016052|ref|ZP_00055813.1| COG0367: Asparagine synthase (glutamine-hydrolyzing)
[Magnetospirillum magnetotacticum MS-1]
Length = 582
Score = 35.2 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 9/100 (9%)
Query: 13 LLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
+ S G+DS+T + A +V++++ + E K L
Sbjct: 263 VFLSAGRDSTTLAAMAAKLGTGKVKSVT--------LAFEEFAGTPKDEAPLAELAARHY 314
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
+HI GD + M + N + R
Sbjct: 315 ATEHITRRIPGGDFAACRDQILADMDQPTIDGVNVWFVAR 354
>gi|295104304|emb|CBL01848.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Faecalibacterium prausnitzii SL3/3]
Length = 367
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 12/34 (35%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
P AL+ SGG DSS ++
Sbjct: 9 RPHALIAMSGGVDSSVAACLMQQAGYDCTGITMR 42
>gi|317133301|ref|YP_004092615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ethanoligenens harbinense YUAN-3]
gi|315471280|gb|ADU27884.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Ethanoligenens harbinense YUAN-3]
Length = 363
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ L SGG DSS + ++ V ++ +
Sbjct: 10 KTVLAAMSGGVDSSVTAALLKEQGASVIGITLN 42
>gi|260463228|ref|ZP_05811430.1| FolC bifunctional protein [Mesorhizobium opportunistum WSM2075]
gi|259031078|gb|EEW32352.1| FolC bifunctional protein [Mesorhizobium opportunistum WSM2075]
Length = 441
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
I+K+ ++ G Q+S T L ++ +R+E +F YGQ E V + L
Sbjct: 190 IMKRGCPVVI---GSQESETALQVLIETAERLECPTFVYGQDFLAFEENGRMVYQDEDGL 246
Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
M L H + A + + ++ + + + N PGR
Sbjct: 247 MDLPLPRLPGRHQVANAAAAIAAVKAAGFEISHRAAEKAMTNVAWPGR 294
>gi|239813728|ref|YP_002942638.1| NAD synthetase [Variovorax paradoxus S110]
gi|239800305|gb|ACS17372.1| NAD+ synthetase [Variovorax paradoxus S110]
Length = 282
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 66/197 (33%), Gaps = 42/197 (21%)
Query: 10 SALLL-FSGGQDSST--CLSW-----ALDRFDRVETLSFD--YG-QRNKVELECRLCVRK 58
AL+L SGG DS T CL+ ++ YG Q+++ E + L V +
Sbjct: 48 KALVLGISGGVDSLTAGCLAQRAVEKLRAEGYGATFIAMRLPYGVQKDEHEAQASLSVIR 107
Query: 59 KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
+ + D +L GD+ + N+ R + F
Sbjct: 108 --PDRILTVDIRPAADGMLAALKKGDL---AFRDAAHEDFVLGNIK-----ARQRMIAQF 157
Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLK 176
A A+ IVIG TD+ A E + + TPL L
Sbjct: 158 AVAGAH----DGIVIG---TDH------------AAEALMGFFTKFGDGAADVTPLSGLD 198
Query: 177 KYETWKLAQDIGGQDLV 193
K LAQ +G D +
Sbjct: 199 KRRVRALAQRLGAPDAL 215
>gi|30698088|ref|NP_201306.2| ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase
(glutamine-hydrolyzing) [Arabidopsis thaliana]
gi|332010602|gb|AED97985.1| asparagine synthetase 2 [Arabidopsis thaliana]
Length = 579
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVET 37
+L SGG DSS + AL ++ E
Sbjct: 230 VLLSGGLDSSLVAAVALRHLEKSEA 254
>gi|297794101|ref|XP_002864935.1| hypothetical protein ARALYDRAFT_496723 [Arabidopsis lyrata subsp.
lyrata]
gi|297310770|gb|EFH41194.1| hypothetical protein ARALYDRAFT_496723 [Arabidopsis lyrata subsp.
lyrata]
Length = 574
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVET 37
+L SGG DSS + AL ++ E
Sbjct: 230 VLLSGGLDSSLVAAVALRHLEKSEA 254
>gi|3859536|gb|AAC72837.1| asparagine synthetase [Arabidopsis thaliana]
Length = 578
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVET 37
+L SGG DSS + AL ++ E
Sbjct: 230 VLLSGGLDSSLVAAVALRHLEKSEA 254
>gi|30698086|ref|NP_851272.1| ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase
(glutamine-hydrolyzing) [Arabidopsis thaliana]
gi|13605883|gb|AAK32927.1|AF367340_1 AT5g65010/MXK3_25 [Arabidopsis thaliana]
gi|8843765|dbj|BAA97313.1| asparagine synthetase [Arabidopsis thaliana]
gi|21700903|gb|AAM70575.1| AT5g65010/MXK3_25 [Arabidopsis thaliana]
gi|332010601|gb|AED97984.1| asparagine synthetase 2 [Arabidopsis thaliana]
Length = 578
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVET 37
+L SGG DSS + AL ++ E
Sbjct: 230 VLLSGGLDSSLVAAVALRHLEKSEA 254
>gi|326382510|ref|ZP_08204201.1| asparagine synthase [Gordonia neofelifaecis NRRL B-59395]
gi|326198629|gb|EGD55812.1| asparagine synthase [Gordonia neofelifaecis NRRL B-59395]
Length = 641
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 19/48 (39%)
Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
SGG DS+ + A+ + T + + + E++ + I
Sbjct: 273 LSGGIDSTAIAALAIQHNPDLITFTTGFEREGYSEVDVAAESAEAIGA 320
>gi|323705537|ref|ZP_08117111.1| argininosuccinate synthase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323535014|gb|EGB24791.1| argininosuccinate synthase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 412
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
+ K +L +SGG D+S + W + ++ + D GQ
Sbjct: 1 MLKGEKVVLAYSGGLDTSVIIPWLKENYECEIIAACIDVGQ 41
>gi|320540048|ref|ZP_08039704.1| putative tRNA(Ile)-lysidine synthetase [Serratia symbiotica str.
Tucson]
gi|320029897|gb|EFW11920.1| putative tRNA(Ile)-lysidine synthetase [Serratia symbiotica str.
Tucson]
Length = 442
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 11/72 (15%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
+ + + L+ FSGG DS+ L Q++ + V +
Sbjct: 10 VAHQLGEHRQVLVAFSGGLDSTVLLHLLAQL-----------RQQHPEFQLRAVHVHHGL 58
Query: 61 VELMPKWKDSLG 72
W D G
Sbjct: 59 SAFADTWADHCG 70
>gi|120602943|ref|YP_967343.1| argininosuccinate synthase [Desulfovibrio vulgaris DP4]
gi|166219964|sp|A1VEQ0|ASSY_DESVV RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|120563172|gb|ABM28916.1| argininosuccinate synthase [Desulfovibrio vulgaris DP4]
Length = 396
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQ 44
+ +L +SGG D+S L W A+ V TL+ D GQ
Sbjct: 1 MSGIKKVVLAYSGGLDTSVILKWLAVTYNCEVVTLTADLGQ 41
>gi|21228898|ref|NP_634820.1| hypothetical protein MM_2796 [Methanosarcina mazei Go1]
gi|20907428|gb|AAM32492.1| conserved protein [Methanosarcina mazei Go1]
Length = 302
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 51/142 (35%), Gaps = 21/142 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALD-RFDR----VETLSFDYGQRNKVELECRLCVRKK 59
IKK + SGG+DSS L DR + +S D E R +
Sbjct: 46 IKKNDVIAVALSGGKDSSVALYIMHKILGDRPDIQIVAISVD---------EGIHGYRPQ 96
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+EL + ++LG HI+ H + +A+ ++ + R I A
Sbjct: 97 SLELAKQLTEALGVRHIIKS---FKDEHGATMDELAVMDREKGTCSYCGVLRKSILNRVA 153
Query: 120 ATLAYRLGITNIVIGVCETDYS 141
+G T +V G D +
Sbjct: 154 I----EIGATKLVTGHNLDDEA 171
>gi|302035864|ref|YP_003796186.1| argininosuccinate synthase [Candidatus Nitrospira defluvii]
gi|300603928|emb|CBK40260.1| Argininosuccinate synthase [Candidatus Nitrospira defluvii]
Length = 405
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 6/93 (6%)
Query: 9 PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV---ELM 64
+L +SGG D+S L W + V D GQ +L+ + + +
Sbjct: 7 KKVVLAYSGGLDTSVILKWLEEVYGCEVIAFCADLGQ--GEDLKAIKKKAQSLGVKKVYV 64
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ +DH+ P+ I S ++
Sbjct: 65 EDLREVFVKDHVFPMLRGNAIYEGSYLLGTSIA 97
>gi|264677341|ref|YP_003277247.1| tRNA(Ile)-lysidine synthetase [Comamonas testosteroni CNB-2]
gi|262207853|gb|ACY31951.1| tRNA(Ile)-lysidine synthetase [Comamonas testosteroni CNB-2]
Length = 336
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 13 LLFSGGQD-SSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCVRKKIVEL 63
+ FSGG D S+ L+ RV + +G QR+ +L R + K+ +
Sbjct: 34 VAFSGGADSSALLLACHARWPGRVRAIHVHHGLQAAADEFQRHCEQLCARHGIALKVCAI 93
Query: 64 MPK 66
+
Sbjct: 94 DAR 96
>gi|126696814|ref|YP_001091700.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
MIT 9301]
gi|205816922|sp|A3PEC4|MNMA_PROM0 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|126543857|gb|ABO18099.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Prochlorococcus marinus str. MIT 9301]
Length = 385
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 72/205 (35%), Gaps = 47/205 (22%)
Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPKWKD 69
++ SGG DSS + ++R VE L+ GQ C + +V+ +D
Sbjct: 27 IVGLSGGVDSSLSAALLVERGWNVEGLTLWLIKGQ--------GSCCSEGLVDAAGLCED 78
Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIF---LVFAATL 122
I+ +I + K + P +P +N+ F L +A
Sbjct: 79 LGINHKIIDS---REIFEREVIKKTTESYEKGFTP---LPCSMCNKNVKFEEMLNYAVN- 131
Query: 123 AYRLGITNIVIG----VCETDYSGYPDCRHDTIRAIETAINLGMESHV------------ 166
+ T+I G + ++ Y+ DC+ + + G + +
Sbjct: 132 --KKDFTHIATGHYARIKKSSYAETLDCKSFKFKDF--LLLRGADENKDQSYFLYSLSQE 187
Query: 167 ---TVHTPLMWLKKYETWKLAQDIG 188
+ PL +KK ET K A +G
Sbjct: 188 VLSRLEFPLGEMKKEETRKEALRLG 212
>gi|46579508|ref|YP_010316.1| argininosuccinate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|47605390|sp|P61522|ASSY_DESVH RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|46448922|gb|AAS95575.1| argininosuccinate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233322|gb|ADP86176.1| argininosuccinate synthase [Desulfovibrio vulgaris RCH1]
Length = 396
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQ 44
+ +L +SGG D+S L W A+ V TL+ D GQ
Sbjct: 1 MSGIKKVVLAYSGGLDTSVILKWLAVTYNCEVVTLTADLGQ 41
>gi|256826638|ref|YP_003150597.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cryptobacterium curtum DSM 15641]
gi|256582781|gb|ACU93915.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Cryptobacterium curtum DSM 15641]
Length = 394
Score = 35.2 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 6 KKAPSALLLFSGGQDSSTCLSWALDRFDRV 35
++ P L+ SGG DSS C + ++ V
Sbjct: 46 QRIPRVLVGLSGGVDSSVCAALLVETGWDV 75
>gi|126460144|ref|YP_001056422.1| asparagine synthase [Pyrobaculum calidifontis JCM 11548]
gi|126249865|gb|ABO08956.1| asparagine synthase [Pyrobaculum calidifontis JCM 11548]
Length = 274
Score = 35.2 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+L SGG DS+ A ++
Sbjct: 15 VLLSGGIDSTLVAYAARRIGHVPVGITVS 43
>gi|83309204|ref|YP_419468.1| asparagine synthase [Magnetospirillum magneticum AMB-1]
gi|82944045|dbj|BAE48909.1| Asparagine synthase [Magnetospirillum magneticum AMB-1]
Length = 627
Score = 35.2 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 13 LLFSGGQDSSTCLS-WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
SGG DSS + A D V T + + + + E E V + + S
Sbjct: 259 CFLSGGIDSSVVAALMAEGAADPVRTFTMTFDEVHYDEREAAAQVAAHVGSRHVELPASS 318
Query: 72 GEDHILP 78
G L
Sbjct: 319 GLADGLD 325
>gi|18977164|ref|NP_578521.1| hypothetical protein PF0792 [Pyrococcus furiosus DSM 3638]
gi|18892817|gb|AAL80916.1| hypothetical protein PF0792 [Pyrococcus furiosus DSM 3638]
Length = 536
Score = 35.2 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
++ + ++ SGG DS + L + YG+ + E+ V K +
Sbjct: 193 LMANGDTIVIPLSGGYDSRAIATMLKKNGYENVIL-YTYGKPDSTEVRVAREVAKNL 248
>gi|29336962|sp|Q9K4Y8|ASSY_MORAB RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|8671272|emb|CAB95023.1| argininosuccinate synthetase [Moritella abyssi]
Length = 404
Score = 35.2 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELE--CRLCVRK 58
+ + ++ +SGG D+S L W + +D E ++ D GQ ELE +
Sbjct: 1 MTQTVKKVVVAYSGGLDTSVILPWLQENYDNCEIVALFVADVGQ-GAEELEGIEAKALAS 59
Query: 59 KIVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD 100
E + KD L E++I P G + + +M Q
Sbjct: 60 GASECYVVDLKDELVENYIYPTLKTGAVYEGTYLLGTSMARQS 102
>gi|319404346|emb|CBI77943.1| NH3-dependent NAD synthetase [Bartonella rochalimae ATCC BAA-1498]
Length = 558
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDY 42
LL FSGG DS+ C + A+D +RV + Y
Sbjct: 291 KDVLLGFSGGIDSALCAAIAVDALGAERVHAVMMPY 326
>gi|313899743|ref|ZP_07833246.1| tRNA(Ile)-lysidine synthetase [Clostridium sp. HGF2]
gi|312955358|gb|EFR37023.1| tRNA(Ile)-lysidine synthetase [Clostridium sp. HGF2]
Length = 406
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 6/64 (9%)
Query: 3 DIIKKAPSA--LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV----ELECRLCV 56
+KK ++ SGG DS L ++ +Y +R+ EL C
Sbjct: 2 KQMKKLEKGTYIIGVSGGPDSMALLDMCRKEGFQLVVAHMNYKKRDTADRDMELVRSYCA 61
Query: 57 RKKI 60
R I
Sbjct: 62 RFHI 65
>gi|312115466|ref|YP_004013062.1| NAD+ synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311220595|gb|ADP71963.1| NAD+ synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 554
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 12 LLL-FSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
++L SGG DS+ C + A D RV + Y + L+ + +
Sbjct: 288 VVLGLSGGIDSAICAAMATDALGAARVHCIMLPYRYTSNASLDDAAACAEAL 339
>gi|260892095|ref|YP_003238192.1| PP-loop domain protein [Ammonifex degensii KC4]
gi|260864236|gb|ACX51342.1| PP-loop domain protein [Ammonifex degensii KC4]
Length = 307
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 13/40 (32%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
++ ++ SGG+DS V D G
Sbjct: 43 MLPPGARVVVALSGGKDSLVTAFVLKRLGYEVLGFFVDLG 82
>gi|294878153|ref|XP_002768284.1| hypothetical protein Pmar_PMAR025097 [Perkinsus marinus ATCC 50983]
gi|239870532|gb|EER01002.1| hypothetical protein Pmar_PMAR025097 [Perkinsus marinus ATCC 50983]
Length = 484
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 48/143 (33%), Gaps = 20/143 (13%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVE-----TLSFDYGQRNKVELECRLCVR 57
+ K+ + +L SGG DSS+ L R+ RV L Y N+ L+
Sbjct: 88 AMTKSRTVVLSLSGGVDSSSTLILLCALRYHRVVDWKLRALYMGY-SANRENLDEARSEL 146
Query: 58 KKIVELMPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
+ L + L +I LP + + SS + Q + R
Sbjct: 147 NLVAWLCEQCNVQLFAFNIDLPRPHGSEGTTSSGVTRDEYETQTKTIR-----FR---MY 198
Query: 117 VFAATLAYRLGITNIVIGVCETD 139
A+ +V+G + D
Sbjct: 199 SLASG---DENC-VVVLGHHQDD 217
>gi|212550705|ref|YP_002309022.1| argininosuccinate synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548943|dbj|BAG83611.1| argininosuccinate synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 400
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 39/132 (29%), Gaps = 18/132 (13%)
Query: 7 KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
+L +SGG D S + + + V T + G + +L+ K+
Sbjct: 1 MKRKVVLAYSGGLDTSFCVMYLSQELGYEVYTALANTGGFTEEDLKKVEKRAYKLGAKKH 60
Query: 66 KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-L 122
D E + + I G++ + + + IF A
Sbjct: 61 VNLDITKEFYEKGIKYMIFGNVLRGA---TYPISVSSER-----------IFQAIAIINY 106
Query: 123 AYRLGITNIVIG 134
++ + G
Sbjct: 107 TKKIKADYVAHG 118
>gi|163815111|ref|ZP_02206492.1| hypothetical protein COPEUT_01267 [Coprococcus eutactus ATCC
27759]
gi|158449520|gb|EDP26515.1| hypothetical protein COPEUT_01267 [Coprococcus eutactus ATCC
27759]
Length = 363
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 3 DIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLS 39
+I + + SGG DSS ++ V ++
Sbjct: 2 KLIDTDKKTVCVGMSGGVDSSVAALLLKEQGYNVIGVT 39
>gi|120601408|ref|YP_965808.1| asparagine synthase (glutamine-hydrolyzing) [Desulfovibrio vulgaris
DP4]
gi|120561637|gb|ABM27381.1| asparagine synthase (glutamine-hydrolyzing) [Desulfovibrio vulgaris
DP4]
Length = 697
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 7/54 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFD----RVETLSFD---YGQRNKVELECRLCVRKK 59
+ SGG DSST L++ R + FD Y + E R
Sbjct: 269 VFLSGGLDSSTVLAYMTRHIPAHDIRTFAIGFDEASYDESAHAEAMARHAGSHH 322
>gi|28572507|ref|NP_789287.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Tropheryma whipplei TW08/27]
gi|81629880|sp|Q83HX5|MNMA_TROW8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|28410639|emb|CAD67025.1| probable tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Tropheryma whipplei TW08/27]
Length = 359
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L SGG DS+ + A+D V +
Sbjct: 2 KVLAAMSGGVDSAVAAARAVDMGHDVVGVH 31
>gi|332285699|ref|YP_004417610.1| hypothetical protein PT7_2446 [Pusillimonas sp. T7-7]
gi|330429652|gb|AEC20986.1| hypothetical protein PT7_2446 [Pusillimonas sp. T7-7]
Length = 323
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 67/206 (32%), Gaps = 61/206 (29%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
++I+ ++ SGG+DS T L L L+ R + I+
Sbjct: 48 NMIEDGDKVMVCLSGGKDSYTMLDILLT-------------------LKARAPINFDIIA 88
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVP---------- 109
+ K +H+LP + + +V I++ + + +P
Sbjct: 89 VNLDQKQPGFPEHVLPDYL--------RSIDVPFHIENQDTYSIVTRVIPEGKTTCSLCS 140
Query: 110 -GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT---------IRAIETAIN 159
R I A+ LG T I +G D G ++A+ +
Sbjct: 141 RLRRGILYRVAS----ELGATKIALGHHRDDILG------TFFLNLFYGGRMKAMPPKLM 190
Query: 160 LGMESHVTVHTPLMWLKKYETWKLAQ 185
H+ + PL ++ + + A+
Sbjct: 191 SDDGKHIVIR-PLAYIPEKDIIAYAE 215
>gi|28493382|ref|NP_787543.1| tRNA-specific 2-thiouridylase MnmA [Tropheryma whipplei str.
Twist]
gi|81436231|sp|Q820Y1|MNMA_TROWT RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|28476423|gb|AAO44512.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Tropheryma whipplei str. Twist]
Length = 359
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
L SGG DS+ + A+D V +
Sbjct: 2 KVLAAMSGGVDSAVAAARAVDMGHDVVGVH 31
>gi|83776736|gb|ABC46690.1| mitochondrial
5-methylaminomethyl-2-thiouridylate-methyltransferase
precursor transcript variant 1 [Homo sapiens]
gi|83776738|gb|ABC46691.1| mitochondrial
5-methylaminomethyl-2-thiouridylate-methyltransferase
precursor transcript variant 2 [Homo sapiens]
Length = 99
Score = 35.2 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGV 34
>gi|294656411|ref|XP_458677.2| DEHA2D04818p [Debaryomyces hansenii CBS767]
gi|199431453|emb|CAG86816.2| DEHA2D04818p [Debaryomyces hansenii]
Length = 415
Score = 35.2 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 1 MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
M ++ S G DSS C + +++ V +
Sbjct: 40 MQPEPNANDEIIVAMSSGVDSSVCAALYAEKYKNVRGI 77
>gi|167043164|gb|ABZ07873.1| putative domain of unknown function (DUF814) [uncultured marine
crenarchaeote HF4000_ANIW141J13]
Length = 352
Score = 35.2 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSF 40
L SGG DS+ + + V ++
Sbjct: 28 LLSGGLDSTLAVKTMQKQGFEVSAVAI 54
>gi|29336887|sp|Q93JQ8|ASSY_RHOFA RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|14595062|emb|CAC43336.1| arginino-succinate synthase [Rhodococcus fascians]
Length = 395
Score = 35.2 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
S +L +SGG D+S + W +R+ V + GQ +E + E++ +
Sbjct: 2 SIVLAYSGGLDTSVAVHWLKERYQTEVIAYCANLGQIEDLEAVSKRATAAGASEVIVEDV 61
Query: 69 DSLGED 74
L
Sbjct: 62 RDLFLH 67
>gi|217077866|ref|YP_002335584.1| NAD synthase family [Thermosipho africanus TCF52B]
gi|217037721|gb|ACJ76243.1| NAD synthase family [Thermosipho africanus TCF52B]
Length = 342
Score = 35.2 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYG 43
+ ++ FSGG DS+ + + VE + YG
Sbjct: 23 NKNVVIAFSGGLDSTVAALLTKEALGPENVELANVVYG 60
>gi|302343311|ref|YP_003807840.1| argininosuccinate synthase [Desulfarculus baarsii DSM 2075]
gi|301639924|gb|ADK85246.1| argininosuccinate synthase [Desulfarculus baarsii DSM 2075]
Length = 404
Score = 35.2 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE 62
+ S +L +SGG D+S L W + +D +V + D GQ ++E ++ +
Sbjct: 1 MANDVKSIVLAYSGGLDTSIILKWLQETYDCQVIAFAADLGQGEELEPVREKAIKTGASK 60
Query: 63 LM-PKWKDSLGEDHILPLAILGDISHS 88
+ ++ D++ P+ I S
Sbjct: 61 VFIDDLREEFARDYVFPMFRANAIYES 87
>gi|18314022|ref|NP_560689.1| GMP synthase [Pyrobaculum aerophilum str. IM2]
gi|21759181|sp|Q8ZT92|GUAA_PYRAE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
Full=GMP synthetase; AltName: Full=Glutamine
amidotransferase
gi|18161600|gb|AAL64871.1| GMP synthetase (glutamine-hydrolysing) [Pyrobaculum aerophilum str.
IM2]
Length = 505
Score = 35.2 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 7 KAPSALLLFSGGQDSSTCLS-WALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
K ++ SGG DS+ RV+ + D+G + E E + K I
Sbjct: 209 KGGDVIVGVSGGVDSTVTAVLLYKAVGQRVKAVFIDHGLFREGEPEEAASLLKSI 263
>gi|76800682|ref|YP_325690.1| NAD(+) synthase (glutamine-hydrolyzing) 2 [Natronomonas pharaonis
DSM 2160]
gi|76556547|emb|CAI48118.1| NAD(+) synthase (glutamine-hydrolyzing) 2 [Natronomonas pharaonis
DSM 2160]
Length = 270
Score = 35.2 bits (80), Expect = 8.9, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRF--DRVETL 38
A ++ SGG DS+T + A++ +RV L
Sbjct: 35 ADGVVVGLSGGLDSTTTATLAVEALGSERVYGL 67
>gi|260774722|ref|ZP_05883626.1| argininosuccinate synthase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609378|gb|EEX35529.1| argininosuccinate synthase [Vibrio coralliilyticus ATCC BAA-450]
Length = 404
Score = 35.2 bits (80), Expect = 8.9, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 7 KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
K ++ +SGG D+S + W + +D V D GQ ELE K
Sbjct: 5 KVNKVVVAYSGGLDTSVIIPWLKENYDCEVVAFVADVGQ-GAEELEGIEAKAKA 57
>gi|160878299|ref|YP_001557267.1| tRNA(Ile)-lysidine synthetase [Clostridium phytofermentans ISDg]
gi|160426965|gb|ABX40528.1| tRNA(Ile)-lysidine synthetase [Clostridium phytofermentans ISDg]
Length = 492
Score = 35.2 bits (80), Expect = 8.9, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 51/144 (35%), Gaps = 26/144 (18%)
Query: 2 NDIIKKAPSALLLFSGGQDSS---TCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
++ + ++ SGG DS TCL +++ + + ++ R +E +
Sbjct: 12 QGMLSPFDTVIVGVSGGADSICLLTCLHRLREQYHLNLYAVHVNHMLRG-MEADEDEAFV 70
Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
+ + + + E + + ++S +++ + GRN+ +L
Sbjct: 71 QSMCNSLSIPLHCVRE----DVKRIAELSGTTIEEA----------------GRNLRYLS 110
Query: 118 FAATLAYRLGITNIVIGVCETDYS 141
F R+ I + D +
Sbjct: 111 F-EQECERVKAHKIAVAHNRNDNA 133
>gi|220927542|ref|YP_002504451.1| tRNA(Ile)-lysidine synthetase [Clostridium cellulolyticum H10]
gi|219997870|gb|ACL74471.1| tRNA(Ile)-lysidine synthetase [Clostridium cellulolyticum H10]
Length = 481
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 32/135 (23%)
Query: 12 LLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
++ SGG DS L + ++ + + + + + L +
Sbjct: 30 VVGISGGYDSVCLLHILYSISNELGIKIYPVHVN----HMLRGDEALRDENFVKSFCSSL 85
Query: 68 KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI---IFLVFAATLAY 124
+ HI DI+ + T+ ++++ GRN +F + A
Sbjct: 86 GLEVYIKHI-------DIAKKAKTEKISLEEA----------GRNARYEVFSLVAG---- 124
Query: 125 RLGITNIVIGVCETD 139
G + I + D
Sbjct: 125 ERGASKIAVAHSRND 139
>gi|46581417|ref|YP_012225.1| asparagine synthetase, glutamine-hydrolyzing [Desulfovibrio
vulgaris str. Hildenborough]
gi|46450839|gb|AAS97485.1| asparagine synthetase, glutamine-hydrolyzing [Desulfovibrio
vulgaris str. Hildenborough]
gi|311235074|gb|ADP87928.1| asparagine synthase (glutamine-hydrolyzing) [Desulfovibrio vulgaris
RCH1]
Length = 697
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 7/54 (12%)
Query: 13 LLFSGGQDSSTCLSWALDRFD----RVETLSFD---YGQRNKVELECRLCVRKK 59
+ SGG DSST L++ R + FD Y + E R
Sbjct: 269 VFLSGGLDSSTVLAYMTRHIPAHDIRTFAIGFDEASYDESAHAEAMARHAGSHH 322
>gi|58617112|ref|YP_196311.1| argininosuccinate synthase [Ehrlichia ruminantium str. Gardel]
gi|81311344|sp|Q5FH27|ASSY_EHRRG RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|58416724|emb|CAI27837.1| Argininosuccinate synthase [Ehrlichia ruminantium str. Gardel]
Length = 394
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
+L +SGG D+S L W + + V + D GQ + + + + + E+
Sbjct: 2 KKIVLAYSGGLDTSVILKWLQENYNCEVVVFTADIGQEDDMSVIQKKAAALNVKEIFIED 61
Query: 67 WKDSLGEDHILPL 79
K+ D + P+
Sbjct: 62 LKEEFVRDFVFPM 74
>gi|57239106|ref|YP_180242.1| argininosuccinate synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|58579053|ref|YP_197265.1| argininosuccinate synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|81819253|sp|Q5HBF2|ASSY_EHRRW RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|57161185|emb|CAH58099.1| argininosuccinate synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417679|emb|CAI26883.1| Argininosuccinate synthase [Ehrlichia ruminantium str.
Welgevonden]
Length = 394
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
+L +SGG D+S L W + + V + D GQ + + + + + E+
Sbjct: 2 KKIVLAYSGGLDTSVILKWLQENYNCEVVVFTADIGQEDDMSVIQKKAAALNVKEIFIED 61
Query: 67 WKDSLGEDHILPL 79
K+ D + P+
Sbjct: 62 LKEEFVRDFVFPM 74
>gi|295107553|emb|CBL05096.1| thiazole biosynthesis/tRNA modification protein ThiI [Gordonibacter
pamelaeae 7-10-1-b]
Length = 419
Score = 34.8 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 7/38 (18%), Positives = 11/38 (28%)
Query: 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
+ + + L S G DS R + F
Sbjct: 178 PVGSSGKVVCLLSSGIDSPVATWKLARRGAVCIGVHFS 215
>gi|262193715|ref|YP_003264924.1| argininosuccinate synthase [Haliangium ochraceum DSM 14365]
gi|262077062|gb|ACY13031.1| argininosuccinate synthase [Haliangium ochraceum DSM 14365]
Length = 397
Score = 34.8 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 5 IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV-E 62
+ +L +SGG D S A V D GQ +E + +
Sbjct: 1 MSNVRKVVLAYSGGLDTSVAVRWIAETYGCEVICYCADVGQGEDLEGARQKALSLGASKA 60
Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
++ +++ D++ P G I S ++
Sbjct: 61 IVHDLRETFVRDYVFPALRAGAIYESEYLLGTSLA 95
>gi|187477024|ref|YP_785048.1| O-antigen biosynthesis aminotransferase [Bordetella avium 197N]
gi|115421610|emb|CAJ48120.1| putative O-antigen biosynthesis aminotransferase [Bordetella avium
197N]
Length = 641
Score = 34.8 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 13/97 (13%)
Query: 15 FSGGQDSSTCLSWALDRFD---RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
SGG DSST + + + R + F ++ E + + +
Sbjct: 278 LSGGIDSSTIAALMQSQSNAPVRTFAIGF-----HEKEYDEA----QHAKAVAAHLGTDH 328
Query: 72 GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
E ++ P L + H + + + +P V
Sbjct: 329 SELYVTPKDALDVVPHLADIYDEPFA-DSSQIPTALV 364
>gi|209885642|ref|YP_002289499.1| glutamine-dependent NAD(+) synthetase [Oligotropha carboxidovorans
OM5]
gi|209873838|gb|ACI93634.1| glutamine-dependent NAD(+) synthetase [Oligotropha carboxidovorans
OM5]
Length = 584
Score = 34.8 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 13 LLF--SGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV---ELMP 65
+L SGG DS+ CL+ A+D +RV + Y K +E + + E++P
Sbjct: 295 VLLGISGGIDSALCLAIAVDAIGVERVRGVMLPYRFTAKESIEDAARIARAFGIRYEVLP 354
Query: 66 KWKDSLGEDHILPLAILG 83
G + IL G
Sbjct: 355 IAAAVTGFEGILKDTFKG 372
>gi|227488498|ref|ZP_03918814.1| asparagine synthetase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227543103|ref|ZP_03973152.1| asparagine synthetase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227091392|gb|EEI26704.1| asparagine synthetase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227181091|gb|EEI62063.1| asparagine synthetase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 614
Score = 34.8 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 1 MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
+ D ++K A + SGG DS+ + A + T + + + E++
Sbjct: 228 LEDSVEKHMRADVTVGSFLSGGIDSTAIAALAKRHNPNLLTFTTGFEREGYSEVDVAAES 287
Query: 57 RKKI 60
+ I
Sbjct: 288 AEAI 291
>gi|301057224|ref|ZP_07198353.1| PP-loop family protein [delta proteobacterium NaphS2]
gi|300448675|gb|EFK12311.1| PP-loop family protein [delta proteobacterium NaphS2]
Length = 266
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 34/146 (23%)
Query: 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDRF------DRVETLSFD--YGQRNKVELECR 53
+I+ L+ SGG+DS L +R ++ + D +G +E
Sbjct: 19 QKMIRDGDHVLVAISGGKDSLALLWILRERLKRIPISYQITAVHVDPGFGGNATASIES- 77
Query: 54 LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
+ S G D+ + + +G +H + + + R +
Sbjct: 78 -------------FLTSNGFDYRIIESDIGPRAHGAENRENPCFLCSRMR-------RKL 117
Query: 114 IFLVFAATLAYRLGITNIVIGVCETD 139
+F +A L I +G + D
Sbjct: 118 LF-----EMADALECNRIALGHHKDD 138
>gi|91978603|ref|YP_571262.1| tRNA(Ile)-lysidine synthetase-like [Rhodopseudomonas palustris
BisB5]
gi|91685059|gb|ABE41361.1| tRNA(Ile)-lysidine synthetase-like [Rhodopseudomonas palustris
BisB5]
Length = 347
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 7 KAPSALLL-FSGGQDSSTCLSW------ALDRFDRVETLSFDYGQRNKVELECRL 54
KA A++L SGG DS L AL R + ++ D+G R + E R
Sbjct: 22 KAVPAIVLAVSGGPDSLALLWLAARWRKALKRGPALGVVTVDHGLRPEAAREARA 76
>gi|317484593|ref|ZP_07943497.1| PP-loop domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316924133|gb|EFV45315.1| PP-loop domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 303
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 3 DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
+ L+ SGG+DS + + + V L D G
Sbjct: 43 KLFTHEDRILVALSGGKDSLSLMLELSRQGYDVTGLHIDLG 83
>gi|282861583|ref|ZP_06270647.1| sulfate adenylyltransferase, small subunit [Streptomyces sp.
ACTE]
gi|282563399|gb|EFB68937.1| sulfate adenylyltransferase, small subunit [Streptomyces sp.
ACTE]
Length = 313
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF 32
++LFSGG+DS L AL F
Sbjct: 41 ERPVILFSGGKDSVVMLHLALKAF 64
>gi|218780316|ref|YP_002431634.1| ExsB family protein [Desulfatibacillum alkenivorans AK-01]
gi|218761700|gb|ACL04166.1| ExsB family protein [Desulfatibacillum alkenivorans AK-01]
Length = 279
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 39/191 (20%)
Query: 1 MNDIIKKAPSALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
+ D++ S L+ FSGG DSS D+ + D + E + + ++
Sbjct: 21 VRDMLAAQKSVLVAFSGGVDSSLLLALAQQALGDKTAAGTVDSPLLPQREKQEAALLTQQ 80
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+ + HI+ + + KN + + +
Sbjct: 81 LG----------IKHHIIKAGEMDSREFRANPKNRCYICKGLHTR--------ALM---- 118
Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW--LKK 177
LA LG+ + G DYS Y R ++ A LG V +PL L K
Sbjct: 119 -ELAKSLGLAKVAHGANTDDYSDY---RPG----LQAARELG------VLSPLADAGLSK 164
Query: 178 YETWKLAQDIG 188
E + ++ +G
Sbjct: 165 QEIREASKALG 175
>gi|312128589|ref|YP_003993463.1| nad+ synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311778608|gb|ADQ08094.1| NAD+ synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 540
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
A++ SGG DSS A++ R L R E + K + E
Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGRENVLGVSMPSRYSSEHS--IKDAKSLAE 337
>gi|227822241|ref|YP_002826212.1| NAD synthetase [Sinorhizobium fredii NGR234]
gi|227341241|gb|ACP25459.1| glutamine-dependent NAD(+) synthetase [Sinorhizobium fredii NGR234]
Length = 560
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 9 PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
+ +L SGG DS+ C + A+D +RV T+ Y ++ L+ K +
Sbjct: 293 KNVVLGLSGGIDSAICAALAVDALGEERVRTIMLPYRYTSQESLKDAEACAKAL 346
>gi|83776740|gb|ABC46692.1| mitochondrial
5-methylaminomethyl-2-thiouridylate-methyltransferase
precursor transcript variant 3 [Homo sapiens]
Length = 99
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
++ + SGG DS+ R +V +
Sbjct: 1 MQALRHVVCSLSGGVDSAVAALLLRRRGYQVTGV 34
>gi|326446717|ref|ZP_08221451.1| asparagine synthase, glutamine-hydrolyzing [Streptomyces
clavuligerus ATCC 27064]
Length = 655
Score = 34.8 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 13 LLFSGGQDSSTCLSWALD 30
+L SGG DSS + A +
Sbjct: 264 VLLSGGLDSSVVAALAQE 281
>gi|145219690|ref|YP_001130399.1| argininosuccinate synthase [Prosthecochloris vibrioformis DSM
265]
gi|189046398|sp|A4SEI8|ASSY_PROVI RecName: Full=Argininosuccinate synthase; AltName:
Full=Citrulline--aspartate ligase
gi|145205854|gb|ABP36897.1| argininosuccinate synthase [Chlorobium phaeovibrioides DSM 265]
Length = 400
Score = 34.8 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVE 49
++K AL SGG D+S + W D++ V ++ + GQ+ ++E
Sbjct: 1 MQKERIALAY-SGGLDTSIMIKWLKDKYGADVVAITGNLGQQKEIE 45
>gi|326202845|ref|ZP_08192712.1| tRNA(Ile)-lysidine synthetase [Clostridium papyrosolvens DSM 2782]
gi|325986922|gb|EGD47751.1| tRNA(Ile)-lysidine synthetase [Clostridium papyrosolvens DSM 2782]
Length = 470
Score = 34.8 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 40/138 (28%), Gaps = 32/138 (23%)
Query: 9 PSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
++ SGG DS L + + ++ + + + + E L +
Sbjct: 20 EGVIVGISGGYDSVCLLHVLYSISNELGIKIYPVHVN----HMLRGEEALRDENFVRSFC 75
Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI---IFLVFAAT 121
+ H+ ++ I +SL + GRN +F
Sbjct: 76 ASLGLEVYVKHV-DVSKKAKIEKTSLEEA----------------GRNARYEVFSTV--- 115
Query: 122 LAYRLGITNIVIGVCETD 139
A G + I + D
Sbjct: 116 -AEEQGASKIAVAHSRND 132
>gi|73670143|ref|YP_306158.1| hypothetical protein Mbar_A2672 [Methanosarcina barkeri str.
Fusaro]
gi|72397305|gb|AAZ71578.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 48/142 (33%), Gaps = 21/142 (14%)
Query: 5 IKKAPSALLLFSGGQDSSTCLSWALDRFD-----RVETLSFDYGQRNKVELECRLCVRKK 59
I+K + SGG+DSS L + +S D E R
Sbjct: 46 IRKNDMIAVALSGGKDSSVALYIVHKILGNRPDIEIVAISVD---------EGINGYRPH 96
Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
+E+ LG HI+ ++ ++ + AM + V +NI+
Sbjct: 97 SLEVAKSLTKMLGVRHII--KSFKEVHGVTMDELAAMDREKGACSYCGVLRKNILNRT-- 152
Query: 120 ATLAYRLGITNIVIGVCETDYS 141
A +G T +V G D +
Sbjct: 153 ---ALEIGATKLVTGHNLDDEA 171
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.157 0.545
Lambda K H
0.267 0.0477 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,095,947,835
Number of Sequences: 14124377
Number of extensions: 220561467
Number of successful extensions: 616232
Number of sequences better than 10.0: 7301
Number of HSP's better than 10.0 without gapping: 6078
Number of HSP's successfully gapped in prelim test: 2696
Number of HSP's that attempted gapping in prelim test: 600706
Number of HSP's gapped (non-prelim): 9868
length of query: 240
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 105
effective length of database: 2,936,002,735
effective search space: 308280287175
effective search space used: 308280287175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 80 (35.2 bits)