RPSBLAST alignment of GI: 254781031 and protein with PDBid: 2c5s

>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1 Length = 413
 Score = 52.0 bits (124), Expect = 1e-07
 Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 25/198 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++L SGG DS       + R   VE + F                 ++  + +      
Sbjct: 190 VMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPP----------FTSERAKQKVIDLAQE 239

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L +           +     T+      ++     +    R ++       +A       
Sbjct: 240 LTKYCKRV-----TLHLVPFTEVQKTINKEIPSSYSMTVMRRMMM-RITERIAEERNALA 293

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I  G              D++  I    N  +        PL+ + K E  K+A++IG  
Sbjct: 294 ITTGESLGQ---VASQTLDSMHTINEVTNYPV------IRPLITMDKLEIIKIAEEIGTY 344

Query: 191 DLVNLILEESHTCYLGKR 208
           D+     E+  T +    
Sbjct: 345 DISIRPYEDCCTVFTPAS 362