HHsearch alignment for GI: 254781033 and conserved domain: CHL00033

Probab=98.24  E-value=2.3e-05  Score=59.90  Aligned_cols=122  Identities=16%  Similarity=0.186  Sum_probs=92.5

Q ss_pred             CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             61589999987532222100016899999972688---505799986545521588699999999888421269899999
Q gi|254781033|r  117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA  193 (492)
Q Consensus       117 ~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~---~~~~~~~gL~~~al~~gd~~~A~~~~~~a~~~~P~~~~a~~~  193 (492)
T Consensus        28 ~k~af~yyr~GmsaQs~GeyaEALe~Y~eAL~Le~D~~Drs~iLYNIGlIy~~nGe~~kALeyY~qALeiNP~~pqA~NN  107 (165)
T CHL00033         28 EKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNN  107 (165)
T ss_pred             HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             28899999815101013538999999998623456851266899899999998588889999999999859996899978


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH
Q ss_conf             999999525745699999999950231035789999999999996699899999998754313352799
Q gi|254781033|r  194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA  262 (492)
Q Consensus       194 L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~a  262 (492)
T Consensus       108 lGvIyh~qG~--~a~~-------~~~~---------------~~~~~~fd~aa~~w~~ai~lap~ny~e  152 (165)
T CHL00033        108 MAVICHYRGE--QAIE-------QGDS---------------EIAEAWFDQAAEYWKQAIALAPGNYIE  152 (165)
T ss_pred             HHHHHHHHHH--HHHH-------CCCH---------------HHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf             9999999879--9998-------4586---------------789999999999999987038997099