HHsearch alignment for GI: 254781033 and conserved domain: COG2956
>COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism].
Probab=99.83 E-value=2.8e-15 Score=137.22 Aligned_cols=328 Identities=16% Similarity=0.165 Sum_probs=262.9
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC----HHHHHHHHHH
Q ss_conf 999999997210047879999863013466615899999875322221000168999999726885----0579998654
Q gi|254781033|r 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYF 162 (492)
Q Consensus 87 al~~gl~al~~Gd~~~A~k~~~~a~~~~~~~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~----~~~~~~gL~~ 162 (492)
T Consensus 38 ~Yv~GlNfLLs~Q~dKAvdlF~e~l~~d~--~t~e~~ltLGnLfRsRGEvDRAIRiHQ~L~~spdlT~~qr~lAl~qL~~ 115 (389)
T COG2956 38 DYVKGLNFLLSNQPDKAVDLFLEMLQEDP--ETFEAHLTLGNLFRSRGEVDRAIRIHQTLLESPDLTFEQRLLALQQLGR 115 (389)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 88867889861696369999999983581--5678988988898863508899999998852899866899999999989
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 5521588699999999888421269899999999999525745699999999950231-035789999999999996699
Q gi|254781033|r 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGD 241 (492)
Q Consensus 163 ~al~~gd~~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~-~~~~~a~l~~~~a~~~~~~~~ 241 (492)
T Consensus 116 Dym~aGl~DRAE~~f~~L~de~efa~~AlqqLl~IYQ~treW~KAIe~A~~L~k~~~q~~~~eIAqfyCELAq~~~~~~~ 195 (389)
T COG2956 116 DYMAAGLLDRAEDIFNQLVDEGEFAEGALQQLLNIYQATREWEKAIDVAERLVKLGGQTYRVEIAQFYCELAQQALASSD 195 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99985646689999999734634328999999999998368999999999999718852125899999999999740311
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC--HHHH----HHHHHHCCCCHHHHHHHHH
Q ss_conf 899999998754313352799999999999739947899999999983289--8999----9999850789589999999
Q gi|254781033|r 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIA----NIYTHLLSENTVGKLKRAL 315 (492)
Q Consensus 242 ~~~A~~~~~~a~~~~p~~~~a~~~~a~~l~~~g~~~~A~~~le~a~~~~p~--p~La----~a~~~~~~~~~~~al~~~~ 315 (492)
T Consensus 196 ~d~A~~~l~kAlqa~~~cvRAsi~lG~v~~~~g~y~~AV~~~e~v~~Qn~~yl~evl~~L~~~Y~~--lg~~~~~~~fL~ 273 (389)
T COG2956 196 VDRARELLKKALQADKKCVRASIILGRVELAKGDYQKAVEALERVLEQNPEYLSEVLEMLYECYAQ--LGKPAEGLNFLR 273 (389)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH--HCCHHHHHHHHH
T ss_conf 899999999998628200103545438887526669999999999984957799999999999999--478778999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH--HHHHHCCCHHHHHHHHHHHH--CCCCC
Q ss_conf 999826898368999999999879988999998878660999899999999--99985799899999999996--28899
Q gi|254781033|r 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQSAL--HAMPD 391 (492)
Q Consensus 316 ~l~~~~P~~~e~~~~LA~~~~~~g~~~~Ar~~l~~al~~~P~~~~~~llA~--ie~~e~~d~~~ar~wl~rA~--~a~~d 391 (492)
T Consensus 274 ~~~~~~~g-~~~~l~l~~l~e~~eG~~~Aq~~l~~Ql~r~Pt~~gf~rl~~~~l~daeeg~~k~sL~~lr~mvgeql~~~ 352 (389)
T COG2956 274 RAMETNTG-ADAELMLADLIELQEGIDAAQAYLTRQLRRKPTMRGFHRLMDYHLADAEEGRAKESLDLLRDMVGEQLRRK 352 (389)
T ss_pred HHHHCCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 99864478-51999999999971077999999999986298188999998855021466622325999999999997316
Q ss_pred CCEECC-CCCCCHHHCCCCCCCCCCCCCC
Q ss_conf 952756-9895542422483768736400
Q gi|254781033|r 392 PLWISD-DGYLSSVWLPLSPISKTLCYFE 419 (492)
Q Consensus 392 p~W~c~-~g~~~~~W~~~c~~~~~~~~~~ 419 (492)
T Consensus 353 ~~YRC~~CGF~a~~l~W~CPsC~~W~Tik 381 (389)
T COG2956 353 PRYRCQNCGFTAHTLYWHCPSCRAWETIK 381 (389)
T ss_pred CCCEECCCCCCHHEEEEECCCCCCCCCCC
T ss_conf 77210016863101354188756522417