HHsearch alignment for GI: 254781033 and conserved domain: COG3898
>COG3898 Uncharacterized membrane-bound protein [Function unknown].
Probab=98.72 E-value=6.1e-05 Score=56.54 Aligned_cols=260 Identities=13% Similarity=0.046 Sum_probs=154.2
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 9999999721004787999986301346661589999-987532222100016899999972688505799986545521
Q gi|254781033|r 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 (492)
Q Consensus 88 l~~gl~al~~Gd~~~A~k~~~~a~~~~~~~~~~L~~L-l~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~gL~~~al~ 166 (492)
T Consensus 124 lLeAQaal~eG~~~~Ar~kfeAMl~d---PEtRllGLRgLyleAqr~GareaAr~yAe~Aa~~Ap~l~WA~~AtLe~r~~ 200 (531)
T COG3898 124 LLEAQAALLEGDYEDARKKFEAMLDD---PETRLLGLRGLYLEAQRLGAREAARHYAERAAEKAPQLPWAARATLEARCA 200 (531)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 99988988647618799999987368---388777678899999860218999999999876366771679999999986
Q ss_pred CCCHHHHHHHHHHHHHH---CCCCHHHHHHHH----HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 58869999999988842---126989999999----99995257456999999999502310357899999999999966
Q gi|254781033|r 167 IGDLNSAQRYATKALDI---SPDAPWVTEAVV----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 (492)
Q Consensus 167 ~gd~~~A~~~~~~a~~~---~P~~~~a~~~L~----~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~~ 239 (492)
T Consensus 201 ~gdWd~AlkLvd~~~~~~vie~~~aeR~rAvLLtAkA~s~ldadp~~Ar~~A~~a~KL~pdlvPa----av~AAralf~d 276 (531)
T COG3898 201 AGDWDGALKLVDAQRAAKVIEKDVAERSRAVLLTAKAMSLLDADPASARDDALEANKLAPDLVPA----AVVAARALFRD 276 (531)
T ss_pred CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHH----HHHHHHHHHHC
T ss_conf 67868899999988887752611677898999988888772488677889999875038763369----99999998742
Q ss_pred CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHCCC---HHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 998999999987543133527999999999997399478999-99999983289---89999999850789589999999
Q gi|254781033|r 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-ILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRAL 315 (492)
Q Consensus 240 ~~~~~A~~~~~~a~~~~p~~~~a~~~~a~~l~~~g~~~~A~~-~le~a~~~~p~---p~La~a~~~~~~~~~~~al~~~~ 315 (492)
T Consensus 277 ~~~rKg~~ilE~aWK~ePHP-~ia~lY~--~ar~gdta~dRlkRa~~L~slk~nnaes~~~va~aAlda~e~~~ARa~Ae 353 (531)
T COG3898 277 GNLRKGSKILETAWKAEPHP-DIALLYV--RARSGDTALDRLKRAKKLESLKPNNAESSLAVAEAALDAGEFSAARAKAE 353 (531)
T ss_pred CCHHHHHHHHHHHHHCCCCH-HHHHHHH--HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 46243324889987349984-8999998--80479748899999999985284206788999999872256487888899
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHCCCCHH
Q ss_conf 99982689836899999999987-998899999887866099989
Q gi|254781033|r 316 RLEEINKESVESLVIVSKIALEM-GSIDQAHAKAMLAMKIAPRKE 359 (492)
Q Consensus 316 ~l~~~~P~~~e~~~~LA~~~~~~-g~~~~Ar~~l~~al~~~P~~~ 359 (492)
T Consensus 354 aa~r~~pres~~-lLlAdIeeAetGDqg~vR~wlAqav~A-PrdP 396 (531)
T COG3898 354 AAAREAPRESAY-LLLADIEEAETGDQGKVRQWLAQAVKA-PRDP 396 (531)
T ss_pred HHHHHCCHHHHH-HHHHHHHHHCCCCHHHHHHHHHHHHCC-CCCC
T ss_conf 875307234689-998778763258647899999998458-8997