HHsearch alignment for GI: 254781033 and conserved domain: COG4700
>COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown].
Probab=97.85 E-value=0.0033 Score=43.04 Aligned_cols=143 Identities=20% Similarity=0.193 Sum_probs=87.8
Q ss_pred HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf 9726885057999865455215886999999998884-212698999999999995257456999999999502310357
Q gi|254781033|r 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD-ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 (492)
Q Consensus 146 ~~~~~~~~~~~~~gL~~~al~~gd~~~A~~~~~~a~~-~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~ 224 (492)
T Consensus 82 ~~~~ApTvqnr-~rLa~al~elGr~~EA~~hy~qalsG~fA~d~a~lLglA~Aqfa~~~~A~a~~tLe~l~e~~pa~r~p 160 (251)
T COG4700 82 ELAIAPTVQNR-YRLANALAELGRYHEAVPHYQQALSGIFAHDAAMLLGLAQAQFAIQEFAAAQQTLEDLMEYNPAFRSP 160 (251)
T ss_pred HHHHCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 87646137889-99999999841056668899998546567988999888988886165888888999986059765899
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHH----HHHHHHCCC
Q ss_conf 89999999999996699899999998754313352799999999999739947899999----999983289
Q gi|254781033|r 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL----EKIWKVNPH 292 (492)
Q Consensus 225 ~a~l~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~a~~l~~~g~~~~A~~~l----e~a~~~~p~ 292 (492)
T Consensus 161 d~~Ll~aR~--laa~g~~a~Aesafe~a~~~ypg~~-ar~~Y~e~La~qgr~~ea~aq~~~v~d~~~r~~~H 229 (251)
T COG4700 161 DGHLLFART--LAAQGKYADAESAFEVAISYYPGPQ-ARIYYAEMLAKQGRLREANAQYVAVVDTAKRSRPH 229 (251)
T ss_pred CCHHHHHHH--HHHCCCCHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHH
T ss_conf 725899999--9845880558999999998588777-89899999997122167888799999999760466