HHsearch alignment for GI: 254781033 and conserved domain: KOG0548

Probab=98.66  E-value=2.2e-05  Score=60.02  Aligned_cols=204  Identities=12%  Similarity=0.070  Sum_probs=142.4

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH---HHHH
Q ss_conf             9986545521588699999999888421269899999999999525745699999999950231035789999---9999
Q gi|254781033|r  157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL---IARS  233 (492)
Q Consensus       157 ~~gL~~~al~~gd~~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~l~---~~~a  233 (492)
T Consensus       227 ek~lgnaaykkk~f~~a~q~y~~a~el~-~~it~~~n~aA~~~e~~~~~~c~~~c~~a~E~gre~rad~klIak~~~r~g  305 (539)
T KOG0548         227 EKELGNAAYKKKDFETAIQHYAKALELA-TDITYLNNIAAVYLERGKYAECIELCEKAVEVGRELRADYKLIAKALARLG  305 (539)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8998899887454899999999998675-666788889889973137987442208899875789999999999999863


Q ss_pred             HHHHHCCCHHHHHHHHHHHHHC--------------------------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             9999669989999999875431--------------------------33527999999999997399478999999999
Q gi|254781033|r  234 LENADKGDMIASYHDAIESLKL--------------------------CDNSIMASICAAKSLISQNKKRKAEVILEKIW  287 (492)
Q Consensus       234 ~~~~~~~~~~~A~~~~~~a~~~--------------------------~p~~~~a~~~~a~~l~~~g~~~~A~~~le~a~  287 (492)
T Consensus       306 ~a~~k~~~~~~ai~~~~kaLte~Rt~~~ls~lk~~Ek~~k~~e~~a~~~pe~A~e~r~kGne~Fk~gdy~~Av~~YteAI  385 (539)
T KOG0548         306 NAYTKREDYEGAIKYYQKALTEHRTPDLLSKLKEAEKALKEAERKAYINPEKAEEEREKGNEAFKKGDYPEAVKHYTEAI  385 (539)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             11355776788999999986632588878777899999999888873184678999987788775358899999999998


Q ss_pred             HHCCCHHHH---HHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             832898999---99998507895899999999998268983689999999998799889999988786609998999
Q gi|254781033|r  288 KVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF  361 (492)
Q Consensus       288 ~~~p~p~La---~a~~~~~~~~~~~al~~~~~l~~~~P~~~e~~~~LA~~~~~~g~~~~Ar~~l~~al~~~P~~~~~  361 (492)
T Consensus       386 kr~P~Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al~~mk~ydkAleay~eale~dp~~~e~  462 (539)
T KOG0548         386 KRDPEDARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAALRAMKEYDKALEAYQEALELDPSNAEA  462 (539)
T ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             42984157888899999987317989988999875093189999999999999998999999999987349155899