HHsearch alignment for GI: 254781033 and conserved domain: PRK10941
>PRK10941 putative transcriptional regulator; Provisional.
Probab=94.58 E-value=0.35 Score=27.23 Aligned_cols=68 Identities=18% Similarity=0.067 Sum_probs=34.2
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHCCC-HHHH--HHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 99999739947899999999983289-8999--99998507895899999999998268983689999999
Q gi|254781033|r 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 (492)
Q Consensus 267 a~~l~~~g~~~~A~~~le~a~~~~p~-p~La--~a~~~~~~~~~~~al~~~~~l~~~~P~~~e~~~~LA~~ 334 (492)
T Consensus 188 K~~~~~e~~~~~AL~~~e~lL~l~Pddp~EiRDRGli~~qL~c~~~Al~DLe~fle~~P~dp~ae~ik~qi 258 (269)
T PRK10941 188 KAALMEEKQMELALRASEALLQFNPEDPYEIRDRGLIYAQLDCEHVALSDLSYFVEQCPEDPISEMIRAQI 258 (269)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99998511499999999999862969979999999999984994899999999999785972899999999