HHsearch alignment for GI: 254781033 and conserved domain: PRK11189

Probab=98.24  E-value=0.00085  Score=47.65  Aligned_cols=219  Identities=13%  Similarity=-0.009  Sum_probs=154.1

Q ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             99999999999999997210047879999863013466615899999875322221000168999999726885057999
Q gi|254781033|r   79 RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY  158 (492)
Q Consensus        79 rr~~k~~~al~~gl~al~~Gd~~~A~k~~~~a~~~~~~~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~  158 (492)
T Consensus        60 t~e~rA~l~yeRGvlyDSlGLr~LAR~DF~qAL~l~P-~~adayN~LG-iy~tq~~~fD~AyEAFDs~LEL~P~y~YA~l  137 (297)
T PRK11189         60 TDEERAQLHYERGVLYDSLGLRALARNDFSQALALRP-DMADAYNYLG-IYLTQEGEFDAAYEAFDSVLELDPTYDYAYL  137 (297)
T ss_pred             CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC-CCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf             9899999999831477641209999864998975399-8589999999-9999971199999998777726987348998


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             86545521588699999999888421269899999999999525745699999999950231035789999999999996
Q gi|254781033|r  159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD  238 (492)
Q Consensus       159 gL~~~al~~gd~~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~  238 (492)
T Consensus       138 NRGIAlYYg~R~~LA~~D~~~fy~~dp~DpYR~LWLYl~e~~-~d~~~A~~~L~~r~~~~~~~~-----W~~~iV~~ylg  211 (297)
T PRK11189        138 NRGIALYYGGRYDLAQDDLLAFYQDDPNDPYRALWLYLIEQK-LDPKQAKENLKQRYEKLDKEQ-----WGWNIVDFYLG  211 (297)
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC-CCHHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHC
T ss_conf             302788744637889999999996099982799999999811-699999999999998357122-----68999999945


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCH----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
Q ss_conf             6998999999987543133527----999999999997399478999999999832898999999985078
Q gi|254781033|r  239 KGDMIASYHDAIESLKLCDNSI----MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE  305 (492)
Q Consensus       239 ~~~~~~A~~~~~~a~~~~p~~~----~a~~~~a~~l~~~g~~~~A~~~le~a~~~~p~p~La~a~~~~~~~  305 (492)
T Consensus       212 ~ise~~~~~~~~~~~~~n~~lAErLcEaYFYLaK~~~~~G~~~~A~~~fKLAla~NVyeFVEhRYA~lEL~  282 (297)
T PRK11189        212 KISEEQLFERLKAGATDNTELAERLCETYFYLAKYYLSLGDLDEAANLFKLALANNVYNFVEHRYALLELA  282 (297)
T ss_pred             CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             89999999999872737099999999999999999998799899999999987048258889999999999