HHsearch alignment for GI: 254781033 and conserved domain: PRK11788

Probab=99.64  E-value=8.4e-12  Score=110.09  Aligned_cols=294  Identities=17%  Similarity=0.099  Sum_probs=223.0

Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHH
Q ss_conf             875322221000168999999726885057999865455215886999999998884212698-----999999999995
Q gi|254781033|r  126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP-----WVTEAVVQQYVL  200 (492)
Q Consensus       126 ~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~gL~~~al~~gd~~~A~~~~~~a~~~~P~~~-----~a~~~L~~l~~~  200 (492)
T Consensus        41 ~Gln~Ll~~q~dkAid~f~~~~~~~~~t~e~hlaLG~LfRrrGE~dRAIriHq~Ll~-rp~L~~~~r~~a~~ELa~Dy~~  119 (389)
T PRK11788         41 KGLNFLLNEQPDKAIDLFIEMLKVDPETVELHLALGNLFRRRGEVDRAIRIHQNLLS-RPDLTREQRLLALQELGQDYLK  119 (389)
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHH
T ss_conf             899887258945999999999864811499999999999965608899999999972-8798999999999999999986


Q ss_pred             CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH-----HHHHHHHHHHHCCC
Q ss_conf             2574569999999995023103578999999999999669989999999875431335279-----99999999997399
Q gi|254781033|r  201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-----ASICAAKSLISQNK  275 (492)
Q Consensus       201 ~gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~-----a~~~~a~~l~~~g~  275 (492)
T Consensus       120 aGllDRAE~~f~~l~~~~~~~~--~--al~~Ll~iye~~~dW~~Ai~~a~~L~~~~~~~~~~~iAhy~CElA~~~~~~~~  195 (389)
T PRK11788        120 AGLLDRAEELFLQLVDEDDFAE--G--ALRQLLTIYQQEKDWQKAIEVAERLEKLGGDSLRKEIAHFYCELAQQALARGD  195 (389)
T ss_pred             CCCHHHHHHHHHHHHHCCCCHH--H--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             7749999999999982854269--9--99999999998645999999999998704765069999999999999987489


Q ss_pred             HHHHHHHHHHHHHHCCCH---HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             478999999999832898---99999998507895899999999998268983-68999999999879988999998878
Q gi|254781033|r  276 KRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESV-ESLVIVSKIALEMGSIDQAHAKAMLA  351 (492)
Q Consensus       276 ~~~A~~~le~a~~~~p~p---~La~a~~~~~~~~~~~al~~~~~l~~~~P~~~-e~~~~LA~~~~~~g~~~~Ar~~l~~a  351 (492)
T Consensus       196 ~~~A~~~L~kAL~~dp~cvRA~lllg~l~~~~g~~~~Ai~~l~~i~~q~p~~l~~vl~~L~~~y~~l~~~~~~~~~L~~~  275 (389)
T PRK11788        196 LDAARALLKKALAADPQCVRASILLGDLALAQGDYAAAIEALERVEEQDPEYLPEVLPKLMECYQALGDEAEGLEFLRRA  275 (389)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             99999999999874824341899999999987999999999999997395779999999999999828888999999999


Q ss_pred             HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEE--------C--CCCCCCH---------------HHC
Q ss_conf             66099989999999999985799899999999996288999527--------5--6989554---------------242
Q gi|254781033|r  352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI--------S--DDGYLSS---------------VWL  406 (492)
Q Consensus       352 l~~~P~~~~~~llA~ie~~e~~d~~~ar~wl~rA~~a~~dp~W~--------c--~~g~~~~---------------~W~  406 (492)
T Consensus       276 ~~~~~~~~l~l~l~~~l~~~-~g~~~A~~~l~~~L~~~Psl~g~~~Ll~~~l~~~~~~~~~~~l~~l~~~v~~~~~~~~~  354 (389)
T PRK11788        276 VEEYPGADLLLALAQLLEER-EGPEAAQALLREQLRRHPSLRGFHRLLDYHLAEAEEGRAKESLELLRDLVGEQLKRKPR  354 (389)
T ss_pred             HHHCCCCHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf             98589935999999999976-99999999999997529988999999998775244765435899999999999717999


Q ss_pred             CCCCCCC-CCCCCCCCCCCC
Q ss_conf             2483768-736400367875
Q gi|254781033|r  407 PLSPISK-TLCYFEWKIPTK  425 (492)
Q Consensus       407 ~~c~~~~-~~~~~~W~~p~~  425 (492)
T Consensus       355 Y~C~~CGF~~~~~~WqCPsC  374 (389)
T PRK11788        355 YRCRNCGFTARTLYWHCPSC  374 (389)
T ss_pred             EECCCCCCCCCCEEEECCCC
T ss_conf             76999999888314579099