HHsearch alignment for GI: 254781033 and conserved domain: PRK12370

Probab=98.84  E-value=1.6e-06  Score=69.01  Aligned_cols=158  Identities=12%  Similarity=0.017  Sum_probs=86.0

Q ss_pred             CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH
Q ss_conf             0001689999997268850579998654552158---------8699999999888421269899999999999525745
Q gi|254781033|r  135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG---------DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS  205 (492)
Q Consensus       135 d~~~A~~~~~~~~~~~~~~~~~~~gL~~~al~~g---------d~~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~  205 (492)
T Consensus       276 dn~~A~~LF~~Av~~dP~fA~AyA~la~cy~q~a~l~~~d~~~~~~~A~~~AeravEldp~dp~a~~~lg~~~~L~~d~~  355 (553)
T PRK12370        276 SLQQALKLLTQCVNMSPNSIAPYCALAECYLSMAQMGIFDKQNAMIKAKEHAIKATELDHNNPQALGLLGLINTIHSEYI  355 (553)
T ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH
T ss_conf             79999999999873397744667878999997634036882889999999999987438788788899999987235522


Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             69999999995023103578999999999999669989999999875431335279999999999973994789999999
Q gi|254781033|r  206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK  285 (492)
Q Consensus       206 ~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~a~~l~~~g~~~~A~~~le~  285 (492)
T Consensus       356 ~a~~~f~rA~~L~Pnsa----~~~Y~~~W~~~maGr~~ea~~~i~~a~~LdP~~~~~~~~~l~~~~~~~~~d~a~~l~~~  431 (553)
T PRK12370        356 VGSLLFKQANLLSPISA----DIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWITYYHTGIDDAIRLGDE  431 (553)
T ss_pred             HHHHHHHHHHCCCCCCH----HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             44799987642599842----57999999999758689999999998835986520279999999984231079999998


Q ss_pred             HHHHCC--CHHHH
Q ss_conf             998328--98999
Q gi|254781033|r  286 IWKVNP--HPEIA  296 (492)
Q Consensus       286 a~~~~p--~p~La  296 (492)
T Consensus       432 ~~~q~~~~~~~~~  444 (553)
T PRK12370        432 LRSQHLQDNPILL  444 (553)
T ss_pred             HHCCCCCCCHHHH
T ss_conf             6250778783699