HHsearch alignment for GI: 254781033 and conserved domain: cd01121

>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.

Probab=95.99  E-value=0.0046  Score=41.91  Aligned_cols=29  Identities=24%  Similarity=0.423  Sum_probs=25.6

Q ss_pred             EECC-CCCCCHHHCCCCCCCCCCCCCCCCC
Q ss_conf             2756-9895542422483768736400367
Q gi|254781033|r  394 WISD-DGYLSSVWLPLSPISKTLCYFEWKI  422 (492)
Q Consensus       394 W~c~-~g~~~~~W~~~c~~~~~~~~~~W~~  422 (492)
T Consensus         1 y~C~~CG~~~~kW~GkCp~Cg~WnTl~E~~   30 (372)
T cd01121           1 YVCSECGYVSPKWLGKCPECGEWNTLVEEI   30 (372)
T ss_pred             CCCCCCCCCCCCCCEECCCCCCCCCEEEEE
T ss_conf             999889997887242697999864389996