HHsearch alignment for GI: 254781033 and conserved domain: cd05804

>cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals. A family member from Streptomyces toyocaensis, StaR is part of a gene cluster involved in the biosynthesis of glycopeptide antibiotics (GPAs), specifically A47934. It has been speculated that StaR could be a flavoprotein hydroxylating a tyrosine sidechain. Some family members have been annotated as proteins containing tetratricopeptide (TPR) repeats, which may at least indicate mostly alpha-helical secondary structure.
Probab=98.98  E-value=9.6e-06  Score=62.84  Aligned_cols=263  Identities=13%  Similarity=0.083  Sum_probs=168.7

Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH----CCCC--HHHHHH
Q ss_conf             9999999999721004787999986301346661589999987532222100016899999972----6885--057999
Q gi|254781033|r   85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPAT--REFAVY  158 (492)
Q Consensus        85 ~~al~~gl~al~~Gd~~~A~k~~~~a~~~~~~~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~----~~~~--~~~~~~  158 (492)
T Consensus        44 E~~hv~a~~~~~~g~~~~A~~~~~~~l~~~--P~D~lalk~-~~~~f~lg~~~g~~~~~~~~l~~~~p~~~~~~~~~gm~  120 (355)
T cd05804          44 ERAHVEALSAWIAGDLPKALALLEQLLDDY--PRDLLALKL-HLGAFGLGDFSGMRDHVARVLPLWAPENPDYWYLLGML  120 (355)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHC--CCHHHHHHH-HHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf             999999999998799789999999999869--835999998-76741025413240569999872573489836999999


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             86545521588699999999888421269899999999999525745699999999950231035789999999999996
Q gi|254781033|r  159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD  238 (492)
Q Consensus       159 gL~~~al~~gd~~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~  238 (492)
T Consensus       121 AF--~leE~g~~~~Ae~~a~~al~~np~d~wa~HAvAHv~~~~g~~~eG~~~l~~~~~~w~~~~~l~~H~wWH~AL~~Le  198 (355)
T cd05804         121 AF--GLEEAGQYDRAEEAARRALELNPDDAWAVHAVAHVLEMQGRFKEGIAFMESWRDTWDCSSMLRGHNWWHLALFYLE  198 (355)
T ss_pred             HH--HHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             99--9998588999999999999639999379999999999838878899999851752577885898999999999887


Q ss_pred             CCCHHHHHHHHHHHHHCCCCC------HHHHHHHHHHHHHC-CCHHHH-HHHHHHHHHHCCC-----HHHHHHHHHHCCC
Q ss_conf             699899999998754313352------79999999999973-994789-9999999983289-----8999999985078
Q gi|254781033|r  239 KGDMIASYHDAIESLKLCDNS------IMASICAAKSLISQ-NKKRKA-EVILEKIWKVNPH-----PEIANIYTHLLSE  305 (492)
Q Consensus       239 ~~~~~~A~~~~~~a~~~~p~~------~~a~~~~a~~l~~~-g~~~~A-~~~le~a~~~~p~-----p~La~a~~~~~~~  305 (492)
T Consensus       199 ~g~~~~~l~iyD~~i~~~~~~~~~~d~~dAaSLL~RLel~G~~~v~~Rw~~la~~~~~~~~~~~~~F~D~H~~~ala~ag  278 (355)
T cd05804         199 RGDYEAALAIYDTHIAPSAESDPALDLLDAASLLWRLELAGHVDVGDRWEDLADYAAWHFPDHGLAFNDLHAALALAGAG  278 (355)
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
T ss_conf             78988999998887445668706999983999999999739987355799999999874565033199999999998489


Q ss_pred             CHHH---HHHHHHHHHHHCCC------CHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             9589---99999999982689------83689999999998799889999988786
Q gi|254781033|r  306 NTVG---KLKRALRLEEINKE------SVESLVIVSKIALEMGSIDQAHAKAMLAM  352 (492)
Q Consensus       306 ~~~~---al~~~~~l~~~~P~------~~e~~~~LA~~~~~~g~~~~Ar~~l~~al  352 (492)
T Consensus       279 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~vg~pl~~Al~a~~~gd~~~a~~lL~p~~  334 (355)
T cd05804         279 DKDALDKLLAALKGRASSADDNKQPARDVGLPLAEALYAFAEGNYATALELLGPVR  334 (355)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             99999999999998763777320056500489999999998589999999999989